Query 001525
Match_columns 1060
No_of_seqs 323 out of 3499
Neff 8.6
Searched_HMMs 29240
Date Tue Mar 26 16:39:33 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001525.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_826-829//hhsearch_pdb/001525hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ixz_A Potassium-transporting 1.0 1 1 929.9 56.1 865 12-974 80-1027(1034)
2 2zxe_A Na, K-ATPase alpha subu 1.0 1 1 914.7 37.1 861 12-970 75-1017(1028)
3 3ar4_A Sarcoplasmic/endoplasmi 1.0 1 1 905.1 48.8 861 12-970 32-992 (995)
4 1mhs_A Proton pump, plasma mem 1.0 1 1 814.3 29.4 767 12-968 95-879 (920)
5 3b8c_A ATPase 2, plasma membra 1.0 1 1 799.8 -20.9 681 12-865 40-728 (885)
6 3rfu_A Copper efflux ATPase; a 1.0 1 1 554.5 28.3 499 69-777 187-693 (736)
7 3j09_A COPA, copper-exporting 1.0 1 1 544.8 32.0 491 72-777 176-673 (723)
8 3j08_A COPA, copper-exporting 1.0 1 1 540.5 30.2 491 72-777 98-595 (645)
9 2yj3_A Copper-transporting ATP 1.0 1 1 204.4 0.0 249 314-763 11-261 (263)
10 3a1c_A Probable copper-exporti 1.0 1 1 174.3 23.3 271 313-762 14-286 (287)
No 1
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=1.00 E-value=1 Score=929.91 Aligned_cols=865 Identities=18% Similarity=0.177 Sum_probs=635.3
Q ss_pred CCCCCCCCCEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--------CCCCCCHHHHHHHHHHHHHH
Q ss_conf 2235689964336778-53210179999999879999999999998711545--------66773014577899999999
Q 001525 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT--------PVNPASTWGPLIFIFAVSAT 82 (1060)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~f~~~~l~~qf~~~~n~~~l~~~il~~~~~~~--------~~~~~~~~~~l~~i~~is~i 82 (1060)
+|+++||+|+++..+. ++| +.+++||.++++++++++++++++.... ..+.+...++++++++++++
T Consensus 80 ~rl~~~G~N~l~~~~~~~~~----~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~ 155 (1034)
T 3ixz_A 80 ELLLRDGPNALRPPRGTPEY----VKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGC 155 (1034)
T ss_pred HHHHHHCCCCCCCCCCCCHH----HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEEEHHHH
T ss_conf 99985099989998999889----99999984738999999999999999874034777654420564243013227999
Q ss_pred HHHHHHHHHHHHHHH---HCCEEEEEEECCEEEEEECCCCCCCEEEEEECCCEECCEEEEEECCCCCCEEEEEECCCCCC
Q ss_conf 999999998452386---51508899979939997415784470999818964042199960379996089980467786
Q 001525 83 KEAWDDYNRYLSDKK---ANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGE 159 (1060)
Q Consensus 83 ~~~~~d~~r~~~~~~---~n~~~~~V~r~g~~~~i~~~~i~vGDII~l~~ge~iPaD~ill~ss~~~G~~~Vd~s~LtGE 159 (1060)
.++++++|+.++.++ +.+.+++|+|||++++|++++|+|||||.|++||+||||++++++++ +.||||+||||
T Consensus 156 ~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~----l~VdES~LTGE 231 (1034)
T 3ixz_A 156 FGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQG----RKVDNSSLTGE 231 (1034)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEECCCEEEEEECC----CEEEECCCCCC
T ss_conf 99999999999999976248973599999989998889879885899857964358769997088----05883366788
Q ss_pred CCCEEECCCCC----------CCCCCHHHHCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCEECCCCCEEEECCEEC
Q ss_conf 67155036410----------12789642135078999348987542000257646998899700025574254001002
Q 001525 160 TDLKTRLIPAA----------CMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLR 229 (1060)
Q Consensus 160 s~~~~k~~~~~----------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~n~llrg~~l~ 229 (1060)
|.|+.|.+... .+.|+....|.+.++|+.+|.+|.++++...+.. ...++.|++..-..+ +..+.
T Consensus 232 S~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~----~~~~~tpl~~~~~~~-~~~l~ 306 (1034)
T 3ixz_A 232 SEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASG----VENEKTPIAIEIEHF-VDIIA 306 (1034)
T ss_pred CCCEECCCCCCCCCCCCCCCCEECCEEEEEECCEEEEEEEHHHHHHHHHHHHHCC----CCCCCCCHHHHHHHH-HHHHH
T ss_conf 7776655777665632344512204069860424999960254374089986203----566789189999999-99999
Q ss_pred CCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCCC
Q ss_conf 56449999883024210014445148873688872234558678899875011354244027899999998785562087
Q 001525 230 NTEWACGVAVYTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMI 309 (1060)
Q Consensus 230 ~t~~~~givi~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iPisl~v~l~~~~~~~~~~i~~d~~~~ 309 (1060)
....+++++++..+.. ...++...+..++ .+++.++|++|+++++++...++..+ .
T Consensus 307 ~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~i---~l~v~~iPe~Lp~~vti~la~~~~rm------a 362 (1034)
T 3ixz_A 307 GLAILFGATFFIVAMC---------------IGYTFLRAMVFFM---AIVVAYVPEGLLATVTVCLSLTAKRL------A 362 (1034)
T ss_pred HHHHHHHHHHHHHHHH---------------HCCHHHHHHHHHH---HHHHHEECCCCHHHHHHHHHHHHHHH------H
T ss_conf 9999999999999999---------------6412999999999---99882026650899999999999987------3
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHH
Q ss_conf 99999875445853311235705999417752244725898999969761698777778533465420599019999999
Q 001525 310 DPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTV 389 (1060)
Q Consensus 310 ~~~~~~~~~~k~~~~~e~LG~v~~I~~DKTGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (1060)
+. ++++|+++++|+||++++||||||||||+|+|+|+++++++..|......... .......++....++.+
T Consensus 363 k~----~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~ 434 (1034)
T 3ixz_A 363 SK----NCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQS----GQTFDQSSETWRALCRV 434 (1034)
T ss_pred HC----CEEECCHHHHHHHCCCCEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCC----CCCCCCCCHHHHHHHHH
T ss_conf 38----82864767888615872997289787236837999999779512256766656----65567677899999999
Q ss_pred HHHCCEEECCCCCCCC---EEEECCCCCHHHHHHHHHHCCCEEEEECCCEEEEEECCEEEEEEEEEEECCCCCCEEEEEE
Q ss_conf 8620400035588983---6884069419999999983690997336967999978907899998986077998038999
Q 001525 390 MAVCNTVIPAKSKAGA---ILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVV 466 (1060)
Q Consensus 390 l~lC~~~~~~~~~~~~---~~~~~~~p~e~aLv~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsvi 466 (1060)
+++||++.....++.. .....++|+|.|+++++...+... .+.+..|++++.+||+|+||||+++
T Consensus 435 ~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~------------~~~~~~~~~~~~~pF~s~rk~m~~v 502 (1034)
T 3ixz_A 435 LTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNA------------MGYRERFPKVCEIPFNSTNKFQLSI 502 (1034)
T ss_pred HHHHCCCEECCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCH------------HHHHHHCCCEEEEEECCCCCEEEEE
T ss_conf 8871626653576777665743554925999999999857886------------8889748606995035777268999
Q ss_pred EEECC--CCCEEEEECCHHHHCCCHHCC-----------CCCHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHH
Q ss_conf 99589--993899925713310200005-----------98367999999999862552789999834988999999999
Q 001525 467 VKDCH--SGNISLLSKGADEAILPYAHA-----------GQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMF 533 (1060)
Q Consensus 467 v~~~~--~~~~~l~~KGa~~~i~~~~~~-----------~~~~~~~~~~~~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~ 533 (1060)
++..+ ++++.+|+|||||.|+++|.. ++.++.+.+.+++++.+|+|||++|+|.++++++.++....
T Consensus 503 ~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~ 582 (1034)
T 3ixz_A 503 HTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFD 582 (1034)
T ss_pred EEECCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHCCCHHHEEEEEECCHHHCCCCCCCC
T ss_conf 98337888608999968849999973775528964019999999999999998714758236867855800043211245
Q ss_pred HHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 99720000289999999997103818989985412579993999999998599699993799657999999869888999
Q 001525 534 KEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP 613 (1060)
Q Consensus 534 ~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~v~~~I~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~ 613 (1060)
.+..+..|+|++|+|+++++||+|++++++|+.|+++||++||+|||+..||.++|+++|+..++.
T Consensus 583 --------------~~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~ 648 (1034)
T 3ixz_A 583 --------------VEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGS 648 (1034)
T ss_pred --------------HHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCCC
T ss_conf --------------344302224867988871368870659999999998699699996997799999999869998872
Q ss_pred CCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHH
Q ss_conf 97089984986889999999999761014799985699993724899999999998855201351289980923099999
Q 001525 614 KGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLV 693 (1060)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sp~qK~~iV 693 (1060)
. ...+....... .............+++|..+....+. .+.+....++..+|+|++|+||..+|
T Consensus 649 ~---------~i~~~~~~~~~----~~~~~~~~~~~~~~~~g~~l~~~~~~---~l~~~~~~~~~~v~ar~~P~~K~~iv 712 (1034)
T 3ixz_A 649 E---------TVEDIAARLRV----PVDQVNRKDARACVINGMQLKDMDPS---ELVEALRTHPEMVFARTSPQQKLVIV 712 (1034)
T ss_pred H---------HHHHHHHHHCC----CCHHCCCCCCCEEEEECHHHHHCCHH---HHHHHHHHCCCEEEEECCHHHHHHHH
T ss_conf 4---------78888876176----50002544543167716766638999---99999873782699966989999999
Q ss_pred HHHHHCCCEEEEECCCCCCHHHHHHCCCEEEECCCCHHHHHHHCCEEECCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 998836992999938966778776179007744872688974425640352102578-8761124468888888888777
Q 001525 694 ELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYK 772 (1060)
Q Consensus 694 ~~lk~~~~~vl~iGDG~NDv~ml~~AdvGI~i~g~~~~~a~~~aD~vi~~~~~l~~l-ll~~Gr~~~~r~~~~i~~~~~k 772 (1060)
+.+|+.++.|+|+|||.||++||++||+||||++++...++++||+++.++++.... .+.|||++|+|+++.+.|.+++
T Consensus 713 ~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ 792 (1034)
T 3ixz_A 713 ESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTK 792 (1034)
T ss_pred HHHHHCCCEEEEECCCHHHHHHHHHCCEEEEECCCCCHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99997699999987957769999978932980775679999854999666883399999999889999999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCC-CCCCCCHHHHHHHH
Q ss_conf 89999999999977204563113467898987885357687654057899033411871111335-78667846799998
Q 001525 773 SLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQ-AGRLLNPSTFAGWF 851 (1060)
Q Consensus 773 ~i~~~~~~~~~~~~~~~~g~~~~~~~~l~~~n~~~~~lp~~~~~~~~d~~~~~~~~~P~ly~~~~-~~~~~~~~~f~~~~ 851 (1060)
|+...++.+++.++.. ..++.++|++|+|++++.+|++++++|+ +++.+|++||. .. .+.+++...++..+
T Consensus 793 ni~~~~~~~~~~~~~~---~~pl~~~qiL~inl~~d~~palal~~e~--~~~~~m~~~Pr---~~~~~~l~~~~~~~~~~ 864 (1034)
T 3ixz_A 793 NIPELTPYLIYITVSV---PLPLGCITILFIELCTDIFPSVSLAYEK--AESDIMHLRPR---NPKRDRLVNEPLAAYSY 864 (1034)
T ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCHHHHHCCCC---CCCCCCCCCHHHHHHHH
T ss_conf 9999999999999821---4668999999999998888888851688--97326647998---97534455788999999
Q ss_pred H-HHHHHHHHHHHHHHHEE---ECC------------C---CCC-----------------EEEEEEHHHHHHHHHHH--
Q ss_conf 8-99999999999865301---025------------6---553-----------------04200021468999988--
Q 001525 852 G-RSLFHAIVAFVISIHVY---AYE------------K---SEM-----------------EEVSMVALSGCIWLQAF-- 893 (1060)
Q Consensus 852 ~-~~~~~~~i~~~~~~~~~---~~~------------~---~~~-----------------~~~~~~~~~~~i~~~~~-- 893 (1060)
+ .++++++..++..+..+ ++. . .+. .+..++.|+..++.+.+
T Consensus 865 ~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~ 944 (1034)
T 3ixz_A 865 FQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADV 944 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999996367762000011122233444431011121110111000002579899999999999999
Q ss_pred -HHHHHCCC-CH--HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -76432243-12--78899999899999999999830698506899999705-966889999999998899999999868
Q 001525 894 -VVALETNS-FT--VFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS-QPSYWITMFLIVAAGMGPIVALKYFRY 968 (1060)
Q Consensus 894 -~v~l~~~~-~~--~~~~~~i~~si~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~~w~~~ll~~~~~llp~~i~k~~~~ 968 (1060)
+++....+ |. ++.|..+|+++++.+++++++.++|..+ ..+++.+ ++.+|+.++...++.++..++.|++.+
T Consensus 945 ~~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~---~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~~~r 1021 (1034)
T 3ixz_A 945 LIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMP---NIFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVR 1021 (1034)
T ss_pred HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH---HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 831268876542677536899999999999999999826677---77567889899999999999999999999999997
Q ss_pred HHCCCH
Q ss_conf 609997
Q 001525 969 TYRASK 974 (1060)
Q Consensus 969 ~~~p~~ 974 (1060)
.+.++-
T Consensus 1022 ~~~~~~ 1027 (1034)
T 3ixz_A 1022 CCPGSW 1027 (1034)
T ss_pred HCCCCH
T ss_conf 479971
No 2
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=1.00 E-value=1 Score=914.74 Aligned_cols=861 Identities=18% Similarity=0.214 Sum_probs=617.8
Q ss_pred CCCCCCCCCEEECCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC----C----CCCCHHHHHHHHHHHHHH
Q ss_conf 223568996433677-8532101799999998799999999999987115456----6----773014577899999999
Q 001525 12 TSQDLYCANRLSNRK-YTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITP----V----NPASTWGPLIFIFAVSAT 82 (1060)
Q Consensus 12 ~~~~~~g~N~i~~~k-~~~~~f~~~~l~~qf~~~~n~~~l~~~il~~~~~~~~----~----~~~~~~~~l~~i~~is~i 82 (1060)
+|+++||+|+++.++ .++| +.+++||++++++++++.++++++..... . +.+...++++++++++++
T Consensus 75 ~r~~~~G~N~l~~~~~~~~~----~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~ 150 (1028)
T 2zxe_A 75 EILARDGPNSLTPPPTTPEW----IKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGC 150 (1028)
T ss_dssp HHHHHHCCSCCCCCCCCCHH----HHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99986699979999999899----99999997089999999999999998751134566652007999898988889999
Q ss_pred HHHHHHHHHHHHHH---HHCCEEEEEEECCEEEEEECCCCCCCEEEEEECCCEECCEEEEEECCCCCCEEEEEECCCCCC
Q ss_conf 99999999845238---651508899979939997415784470999818964042199960379996089980467786
Q 001525 83 KEAWDDYNRYLSDK---KANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGE 159 (1060)
Q Consensus 83 ~~~~~d~~r~~~~~---~~n~~~~~V~r~g~~~~i~~~~i~vGDII~l~~ge~iPaD~ill~ss~~~G~~~Vd~s~LtGE 159 (1060)
.++++++++.++.+ ++.+.+++|+|||++++|++++|+|||||.|++||+||||++++++++ |+||||+||||
T Consensus 151 ~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~----~~VdeS~LTGE 226 (1028)
T 2zxe_A 151 FSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHG----CKVDNSSLTGE 226 (1028)
T ss_dssp HHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEEE----EEEECHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEECEEEEEEECC----EEEECCCCCCC
T ss_conf 99999999999999988527872699989999999888978677799899798412289996085----89986756788
Q ss_pred CCCEEECCCCC----------CCCCCHHHHCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCEECCCCCEEEECCEEC
Q ss_conf 67155036410----------12789642135078999348987542000257646998899700025574254001002
Q 001525 160 TDLKTRLIPAA----------CMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLR 229 (1060)
Q Consensus 160 s~~~~k~~~~~----------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~n~llrg~~l~ 229 (1060)
|.|+.|.+++. +++|+....|.+.++|+++|.+|.++++...+.. ...++.|++..-..+.. .+.
T Consensus 227 S~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~----~~~~~t~lq~~~~~~~~-~l~ 301 (1028)
T 2zxe_A 227 SEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASG----LEVGRTPIAIEIEHFIH-IIT 301 (1028)
T ss_dssp CSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHH----SCCCCCHHHHHHHHHHH-HHH
T ss_pred CCCEECCCCCCCCCCCCCCCEEEECCEEECCEEEEEEEEECCCCHHHHHHHHCCC----CCCCCCCHHHHHHHHHH-HHH
T ss_conf 7634434677888844533548737469701699999984514398899986037----88788928999999999-999
Q ss_pred CCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCCC
Q ss_conf 56449999883024210014445148873688872234558678899875011354244027899999998785562087
Q 001525 230 NTEWACGVAVYTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMI 309 (1060)
Q Consensus 230 ~t~~~~givi~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iPisl~v~l~~~~~~~~~~i~~d~~~~ 309 (1060)
....+++++++..+ .| ...+|...+...++ ++..++|++|+++++++...++..+ .
T Consensus 302 ~~~l~~~~~~~~~~-~~--------------~~~~~~~~~~~~i~---llv~~iP~~Lp~~vti~l~~~~~~m------a 357 (1028)
T 2zxe_A 302 GVAVFLGVSFFILS-LI--------------LGYSWLEAVIFLIG---IIVANVPEGLLATVTVCLTLTAKRM------A 357 (1028)
T ss_dssp HHHHHHHHHHHHHH-HH--------------TTCCHHHHHHHHHH---HHHHHSCTTHHHHHHHHHHHHHHHH------H
T ss_pred HHHHHHHHHHHHHH-HH--------------CCCCHHHHHHHHHH---HHHHHCCCHHHHHHHHHHHHHHHHH------H
T ss_conf 99999999999999-97--------------36769999999999---9999747417999999999999998------5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHH
Q ss_conf 99999875445853311235705999417752244725898999969761698777778533465420599019999999
Q 001525 310 DPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTV 389 (1060)
Q Consensus 310 ~~~~~~~~~~k~~~~~e~LG~v~~I~~DKTGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (1060)
+. ++++|+++.+|+||++++||||||||||+|+|+|+++++++..|.....+.... ......++...+++.+
T Consensus 358 k~----~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~ 429 (1028)
T 2zxe_A 358 RK----NCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSG----AAFDKTSATWSALSRI 429 (1028)
T ss_dssp TT----TEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCS----CCCCSSCHHHHHHHHH
T ss_pred HC----CCEECCCHHHHHHCCCEEEECCCCCCCCCCEEEEEEEEECCEEEECCCCCCCCC----CCCCCCCHHHHHHHHH
T ss_conf 58----916444567664147629951688888877389999998984651367777655----4446677899999999
Q ss_pred HHHCCEEECCCCCCCC---EEEECCCCCHHHHHHHHHHCCCEEEEECCCEEEEEECCEEEEEEEEEEECCCCCCEEEEEE
Q ss_conf 8620400035588983---6884069419999999983690997336967999978907899998986077998038999
Q 001525 390 MAVCNTVIPAKSKAGA---ILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVV 466 (1060)
Q Consensus 390 l~lC~~~~~~~~~~~~---~~~~~~~p~e~aLv~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsvi 466 (1060)
+++||++..+....+. ..+..++|+|.||++++++.+... .+.+..|++++.+||+|+||||+++
T Consensus 430 ~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~------------~~~~~~~~~~~~~pF~s~rk~msvi 497 (1028)
T 2zxe_A 430 AALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSV------------QGMRDRNPKIVEIPFNSTNKYQLSI 497 (1028)
T ss_dssp HHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCH------------HHHHHHSCEEEEECCCTTTCEEEEE
T ss_pred HHHCCCCEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCH------------HHHHHHCCEEEEECCCCCCCEEEEE
T ss_conf 9865787650477777664530078940999999999958988------------8988748267870447666647999
Q ss_pred EEECC--CCCEEEEECCHHHHCCCHHCCC-----------CCHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHH
Q ss_conf 99589--9938999257133102000059-----------8367999999999862552789999834988999999999
Q 001525 467 VKDCH--SGNISLLSKGADEAILPYAHAG-----------QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMF 533 (1060)
Q Consensus 467 v~~~~--~~~~~l~~KGa~~~i~~~~~~~-----------~~~~~~~~~~~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~ 533 (1060)
++.+. ++++.+|+|||||.|+++|... +.++.+.+++++++.+|+|||++|||+++++++.++.
T Consensus 498 ~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~--- 574 (1028)
T 2zxe_A 498 HENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGY--- 574 (1028)
T ss_dssp EECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTC---
T ss_pred EECCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCC---
T ss_conf 94057888717999938828999874565338972128889999999999999855997999998746822134201---
Q ss_pred HHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 99720000289999999997103818989985412579993999999998599699993799657999999869888999
Q 001525 534 KEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP 613 (1060)
Q Consensus 534 ~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~v~~~I~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~ 613 (1060)
.. +++ ..+..|+|++|+|+++++||+|++++++|+.|+++||++||+|||+..||.++|+++|+...+.
T Consensus 575 -----~~-~~~-----~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~ 643 (1028)
T 2zxe_A 575 -----PF-DAD-----EPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGN 643 (1028)
T ss_dssp -----CC-CTT-----TTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTC
T ss_pred -----CC-CHH-----HHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCC
T ss_conf -----24-624-----5555543809986511578998448999999998699799988997799999999869887883
Q ss_pred CCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHH
Q ss_conf 97089984986889999999999761014799985699993724899999999998855201351289980923099999
Q 001525 614 KGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLV 693 (1060)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sp~qK~~iV 693 (1060)
. ...+.....+ ... ...........+++|..+....++ .+.++...++..+|+|++|+||..+|
T Consensus 644 ~---------~i~~~~~~~~---~~~-~~~~~~~~~~~vi~G~~l~~~~~~---~l~~~~~~~~~~v~ar~~P~~K~~iV 707 (1028)
T 2zxe_A 644 E---------TIEDIAARLN---IPI-GQVNPRDAKACVVHGSDLKDLSTE---VLDDILHYHTEIVFARTSPQQKLIIV 707 (1028)
T ss_dssp C---------CHHHHHHHTT---CCG-GGSCGGGCCEEEEEHHHHTTCCHH---HHHHHHHHCSEEEEESCCHHHHHHHH
T ss_pred H---------HHHHHHHHCC---CCH-HHCCCCCCCEEEEECHHHHHCCHH---HHHHHHHHCCCEEEEECCHHHHHHHH
T ss_conf 3---------6777776418---632-221555662699880885647999---99999862796799985888999999
Q ss_pred HHHHHCCCEEEEECCCCCCHHHHHHCCCEEEECC-CCHHHHHHHCCEEECCCCHHHHH-HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9988369929999389667787761790077448-72688974425640352102578-876112446888888888877
Q 001525 694 ELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG-REGLQAARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFY 771 (1060)
Q Consensus 694 ~~lk~~~~~vl~iGDG~NDv~ml~~AdvGI~i~g-~~~~~a~~~aD~vi~~~~~l~~l-ll~~Gr~~~~r~~~~i~~~~~ 771 (1060)
+.+|+.|+.|+|+|||.||+|||++||+||+| | ++...++++||+++.++++-... ++.|||++|+|+++.+.|.++
T Consensus 708 ~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAm-g~~gtd~ak~aAD~Vl~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~ 786 (1028)
T 2zxe_A 708 EGCQRQGAIVAVTGDGVNDSPALKKADIGVAM-GISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLT 786 (1028)
T ss_dssp HHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE-SSSCCHHHHHHCSEEETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEEECCCCCHHHHHHHCCCEEEE-CCCCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99996899899985885339999868911996-77658889985489955798779999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHH-H
Q ss_conf 789999999999977204563113467898987885357687654057899033411871111335786678467999-9
Q 001525 772 KSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAG-W 850 (1060)
Q Consensus 772 k~i~~~~~~~~~~~~~~~~g~~~~~~~~l~~~n~~~~~lp~~~~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~f~~-~ 850 (1060)
+|+...+..+++.++.. ..+++++|++|+|++++.+|++++.+|+ +++.+|++||. ..+.+.+++...++. |
T Consensus 787 ~n~~~~~~~~~~~~~~~---~~~l~~~qil~inl~~d~~pa~al~~e~--~~~~~m~~~Pr--~~~~~~l~~~~~~~~~~ 859 (1028)
T 2zxe_A 787 SNIPEITPFLVFIIGNV---PLPLGTVTILCIDLGTDMVPAISLAYEQ--AESDIMKRQPR--NPKTDKLVNERLISMAY 859 (1028)
T ss_dssp TTHHHHHHHHHHHHHCC---CCSSCHHHHHHHHTTTTHHHHHHGGGCC--CSSCGGGSCCC--CTTTCCSSCHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHHHCCCC--CCHHHHCCCCC--CCCCCCCCCHHHHHHHH
T ss_conf 99999999999999766---6445799999999999999999860286--61456515999--95213452799999999
Q ss_pred HHHHHHHHHHHHHHHHHEEEC-C--------------C---CC-----CE------------EEEEEHHHHHHHHHHHHH
Q ss_conf 889999999999986530102-5--------------6---55-----30------------420002146899998876
Q 001525 851 FGRSLFHAIVAFVISIHVYAY-E--------------K---SE-----ME------------EVSMVALSGCIWLQAFVV 895 (1060)
Q Consensus 851 ~~~~~~~~~i~~~~~~~~~~~-~--------------~---~~-----~~------------~~~~~~~~~~i~~~~~~v 895 (1060)
+..+++++++.|+..+..+.. . . .. .. ...++.|...++.+.+++
T Consensus 860 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~ 939 (1028)
T 2zxe_A 860 GQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADL 939 (1028)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999874067662013102200103565421134553222344445666788999999999999999
Q ss_pred HH-HCCCCHH----HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 43-2243127----8899999899999999999830698506899999705-9668899999999988999999998686
Q 001525 896 AL-ETNSFTV----FQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS-QPSYWITMFLIVAAGMGPIVALKYFRYT 969 (1060)
Q Consensus 896 ~l-~~~~~~~----~~~~~i~~si~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~~w~~~ll~~~~~llp~~i~k~~~~~ 969 (1060)
.. ++...++ +.+..++..+++.++++++..++|... .++++.+ ++..|+.++.+.+..++...+.|++.+.
T Consensus 940 ~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~---~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~ 1016 (1028)
T 2zxe_A 940 IICKTRRNSIFQQGMKNKILIFGLFEETALAAFLSYCPGTD---VALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFIIRR 1016 (1028)
T ss_dssp HHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTTHH---HHTCCCCCCGGGGGTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH---HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 98746875110157768899999999999999999865677---642188899999999999999999999999999870
Q ss_pred H
Q ss_conf 0
Q 001525 970 Y 970 (1060)
Q Consensus 970 ~ 970 (1060)
+
T Consensus 1017 ~ 1017 (1028)
T 2zxe_A 1017 S 1017 (1028)
T ss_dssp C
T ss_pred C
T ss_conf 6
No 3
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=1.00 E-value=1 Score=905.07 Aligned_cols=861 Identities=20% Similarity=0.235 Sum_probs=605.5
Q ss_pred CCCCCCCCCEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCHHHHHHHHHHHHHHHHH
Q ss_conf 2235689964336778-53210179999999879999999999998711545667-----73014577899999999999
Q 001525 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVN-----PASTWGPLIFIFAVSATKEA 85 (1060)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~f~~~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~-----~~~~~~~l~~i~~is~i~~~ 85 (1060)
+|+++||.|+++++|+ ++| +.+++||+++++++++++++++++..+...+ .+...+.++++++++++.+.
T Consensus 32 ~r~~~~G~N~l~~~~~~~~~----~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~ 107 (995)
T 3ar4_A 32 RHLEKYGHNELPAEEGKSLW----ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGV 107 (995)
T ss_dssp HHHHHHCCSSCCCCCCCCHH----HHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGSSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99975688732898898699----99999998899999999999999988602566540347876886678899999999
Q ss_pred HHHHHHHHH---HHHHCCEEEEEEECCE--EEEEECCCCCCCEEEEEECCCEECCEEEEEECCCCCCEEEEEECCCCCCC
Q ss_conf 999998452---3865150889997993--99974157844709998189640421999603799960899804677866
Q 001525 86 WDDYNRYLS---DKKANEKEVWVVKQGI--KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGET 160 (1060)
Q Consensus 86 ~~d~~r~~~---~~~~n~~~~~V~r~g~--~~~i~~~~i~vGDII~l~~ge~iPaD~ill~ss~~~G~~~Vd~s~LtGEs 160 (1060)
+++++..++ .+++.+.+++|+|||. .++|++++|+|||||.|++||+||||+++++.+ .|.|+||||+|||||
T Consensus 108 ~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~--s~~l~VdeS~LTGES 185 (995)
T 3ar4_A 108 WQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIK--STTLRVDQSILTGES 185 (995)
T ss_dssp HHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEC--SSCEEEECHHHHCCC
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEHHHCCCCCEEEECCCCCCCCCEEEEEEE--ECEEEEECCCCCCCC
T ss_conf 999999999999871089738999379864799789998778789988978435448999885--043999825246887
Q ss_pred CCEEECCC-------------CCCCCCCHHHHCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCEECCCCCEEEECCE
Q ss_conf 71550364-------------10127896421350789993489875420002576469988997000255742540010
Q 001525 161 DLKTRLIP-------------AACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCY 227 (1060)
Q Consensus 161 ~~~~k~~~-------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~n~llrg~~ 227 (1060)
.|+.|+++ +.+++|+....|.+.++|+++|.+|.++++...+.. ...++.|++..-..+.. .
T Consensus 186 ~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~----~~~~~tplq~~~~~~~~-~ 260 (995)
T 3ar4_A 186 VSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAA----TEQDKTPLQQKLDEFGE-Q 260 (995)
T ss_dssp SCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHT----CCCCCCHHHHHHHHHHH-H
T ss_pred CCEECCCCCCCCCCCCCCCCCCEEECCCEEECCEEEEEEEECCCCHHHHHHHHHHHC----CCCCCCCHHHHHHHHHH-H
T ss_conf 633400456677666755545467618789844589999976722198999997325----78789938999999999-9
Q ss_pred ECCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHH-HHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHH
Q ss_conf 0256449999883024210014445148873688872234558-678899875011354244027899999998785562
Q 001525 228 LRNTEWACGVAVYTAGNVWKDTEARKQWYVLYPQEFPWYELLV-IPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDY 306 (1060)
Q Consensus 228 l~~t~~~~givi~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~iPisl~v~l~~~~~~~~~~i~~d~ 306 (1060)
+.....+++++++..+..+... ......|...+. .+...+.+++.++|++|+++++++...++..+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~~m---- 327 (995)
T 3ar4_A 261 LSKVISLICVAVWLINIGHFND---------PVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM---- 327 (995)
T ss_dssp HHHHHHHHHHHHHHTTGGGGGS---------CSSSSCHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHHHHHHHHHHHCC---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH----
T ss_conf 9999999999999999987414---------334640799999999999999998667604899999999999984----
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCEEECCC--------CCCCCCC-HHHH----
Q ss_conf 08799999875445853311235705999417752244725898999969761698--------7777785-3346----
Q 001525 307 EMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNE--------TGDALKD-VGLL---- 373 (1060)
Q Consensus 307 ~~~~~~~~~~~~~k~~~~~e~LG~v~~I~~DKTGTLT~n~m~v~~~~i~~~~y~~~--------~~~~~~~-~~~~---- 373 (1060)
.+. ++++|+++++|+||++++||||||||||+|+|+|++++..+..++.. .+..... .+..
T Consensus 328 --a~~----~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 401 (995)
T 3ar4_A 328 --AKK----NAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDK 401 (995)
T ss_dssp --HHT----TEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTE
T ss_pred --CCC----CCEECCCHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC
T ss_conf --417----84861341555503833997658887665856999998347556765543025404777688631013664
Q ss_pred HHHHCCCCCHHHHHHHHHHCCEEECCCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEEECCCEEEEEE------CCEEEE
Q ss_conf 54205990199999998620400035588983688406941999999998369099733696799997------890789
Q 001525 374 NAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKF------NGSVLQ 447 (1060)
Q Consensus 374 ~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~p~e~aLv~~a~~~g~~~~~~~~~~~~~~~------~~~~~~ 447 (1060)
......++...+++.++++||++.+..++++......++|+|.||+.++++.|+ +...... +.... ......
T Consensus 402 ~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~-~~~~~~~-i~~~~~~~~~~~~~~~~ 479 (995)
T 3ar4_A 402 PIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNV-FNTEVRN-LSKVERANACNSVIRQL 479 (995)
T ss_dssp ECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCT-TCCCCTT-SCTTTSTTHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCC-CCCCCCC-CCCCCCCCCCHHHHHHH
T ss_conf 344445589999999998748880565688983255479647999999998399-6410001-34201012101556641
Q ss_pred EEEEEEECCCCCCEEEEEEEEECCCC-----CEEEEECCHHHHCCCHHCCC-----------CCHHHHHHHHHHH--HHC
Q ss_conf 99989860779980389999958999-----38999257133102000059-----------8367999999999--862
Q 001525 448 YEILETLEFTSDRKRMSVVVKDCHSG-----NISLLSKGADEAILPYAHAG-----------QQTRTFVEAVEQY--SQL 509 (1060)
Q Consensus 448 ~~il~~~~F~s~rkrmsviv~~~~~~-----~~~l~~KGa~~~i~~~~~~~-----------~~~~~~~~~~~~~--a~~ 509 (1060)
|++++++||+|+|||||++++.++ | ++.+|+|||||.|+++|... +.++.+.++++++ +.+
T Consensus 480 ~~~~~~~pF~s~rk~msvi~~~~~-g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~ 558 (995)
T 3ar4_A 480 MKKEFTLEFSRDRKSMSVYCSPAK-SSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRD 558 (995)
T ss_dssp EEEEEEEEEETTTTEEEEEEEESS-CCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTT
T ss_pred CCEEEEEECCCCCCEEEEEEECCC-CCCCCCCEEEEECCCHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 745777404888875699983489-8766644499975887999985405442897324999999999999998776305
Q ss_pred CCEEEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCEEE
Q ss_conf 55278999983498899999999999720000289999999997103818989985412579993999999998599699
Q 001525 510 GLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFW 589 (1060)
Q Consensus 510 Glr~l~~A~r~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~v~~~I~~l~~aGIkv~ 589 (1060)
|+|||++|||+++..+. ...+.+ ...++.+|+|++++|+++++|++|++++++|+.|+++||++|
T Consensus 559 GlRvLa~A~k~~~~~~~----------~~~~~~-----~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~ 623 (995)
T 3ar4_A 559 TLRCLALATRDTPPKRE----------EMVLDD-----SSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVI 623 (995)
T ss_dssp CCEEEEEEEESSCCCGG----------GCCTTC-----GGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEE
T ss_pred CCEEEEEEEEECCCCCC----------CCCCCC-----CHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEE
T ss_conf 61488999983476511----------122234-----024455306948999985258896669999999998699899
Q ss_pred EECCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHH
Q ss_conf 99379965799999986988899997089984986889999999999761014799985699993724899999999998
Q 001525 590 MLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAF 669 (1060)
Q Consensus 590 ilTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f 669 (1060)
|+|||+..||.++|+++|+...+.+ + . ..+++|..++.+.++ .+
T Consensus 624 miTGD~~~ta~~ia~~lgi~~~~~~--i---~----------------------------~~~~~g~~~~~l~~~---~~ 667 (995)
T 3ar4_A 624 MITGDNKGTAIAICRRIGIFGENEE--V---A----------------------------DRAYTGREFDDLPLA---EQ 667 (995)
T ss_dssp EEESSCHHHHHHHHHHHTSSCTTCC--C---T----------------------------TTEEEHHHHHTSCHH---HH
T ss_pred EECCCCHHHHHHHHHHCCCCCCCCC--C---C----------------------------CEEEECHHHHHCCHH---HH
T ss_conf 9899978999999998396778875--3---5----------------------------348983664628999---99
Q ss_pred HHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCEEEECCCCHHHHHHHCCEEECCCCHHHH
Q ss_conf 85520135128998092309999999883699299993896677877617900774487268897442564035210257
Q 001525 670 TELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKR 749 (1060)
Q Consensus 670 ~~l~~~~~~~i~~r~sp~qK~~iV~~lk~~~~~vl~iGDG~NDv~ml~~AdvGI~i~g~~~~~a~~~aD~vi~~~~~l~~ 749 (1060)
.++ .++..+|+|++|+||+.+|+.+|+.|+.|+|+|||.||++||++||+||+| |++...++++||+++.++++...
T Consensus 668 ~~~--~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiam-g~g~~~ak~aAd~vl~~~~~~~i 744 (995)
T 3ar4_A 668 REA--CRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM-GSGTAVAKTASEMVLADDNFSTI 744 (995)
T ss_dssp HHH--HHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEE-TTSCHHHHHTCSEEETTCCHHHH
T ss_pred HHH--HHHCCEEEEECHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCEEEEE-CCCCHHHHHHCCEEECCCCHHHH
T ss_conf 998--753738997089999999999997799799983881449999878967996-78899999738899777877899
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHC
Q ss_conf 8-876112446888888888877789999999999977204563113467898987885357687654057899033411
Q 001525 750 L-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQ 828 (1060)
Q Consensus 750 l-ll~~Gr~~~~r~~~~i~~~~~k~i~~~~~~~~~~~~~~~~g~~~~~~~~l~~~n~~~~~lp~~~~~~~~d~~~~~~~~ 828 (1060)
. ++.|||++|+|+++.+.|.+++|+...+..+++.++.. ..++.++|++|+|++++.+|++++.+++ ++..+|+
T Consensus 745 ~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~---~~pl~~~qil~~nl~~d~~p~l~l~~~~--~~~~~m~ 819 (995)
T 3ar4_A 745 VAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGL---PEALIPVQLLWVNLVTDGLPATALGFNP--PDLDIMD 819 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---CCSSCHHHHHHHHHTTTHHHHHHHTTCC--CCTTGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHHHCCCC--CCHHHHH
T ss_conf 9999998999999999999999999999999999999847---6257899999999999887777630677--7756873
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEE--ECCC------------------CC----------CEE
Q ss_conf 87111133578667846799998899999999999865301--0256------------------55----------304
Q 001525 829 HPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVY--AYEK------------------SE----------MEE 878 (1060)
Q Consensus 829 ~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~i~~~~~~~~~--~~~~------------------~~----------~~~ 878 (1060)
+||. .+.+.+++.+.++.|++.+++++++.++..+..+ .... .. ...
T Consensus 820 ~~P~---~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 896 (995)
T 3ar4_A 820 RPPR---SPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPE 896 (995)
T ss_dssp SCCC---CTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCCSCCSCSCCCGGGCHH
T ss_pred CCCC---CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 7999---9764544899999999999999999999999999851566543300000112234443333433221001013
Q ss_pred EEEEHHHHHHHHHHHHH---HHHCCCC---HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC-CHHHHHHHHH
Q ss_conf 20002146899998876---4322431---278899999899999999999830698506899999705-9668899999
Q 001525 879 VSMVALSGCIWLQAFVV---ALETNSF---TVFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS-QPSYWITMFL 951 (1060)
Q Consensus 879 ~~~~~~~~~i~~~~~~v---~l~~~~~---~~~~~~~i~~si~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~~w~~~ll 951 (1060)
..++.|+..++.+.++. +....++ ..+.+..++.++++.+++++++.++|..+ .++++.. ++.+|+.+++
T Consensus 897 ~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~---~~f~~~~l~~~~w~~~~~ 973 (995)
T 3ar4_A 897 PMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLP---MIFKLKALDLTQWLMVLK 973 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTHHH---HHTTCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH---HHHCCCCCCHHHHHHHHH
T ss_conf 56599999999999999986025543100577547999999999999999999888777---761157899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q ss_conf 9999889999999986860
Q 001525 952 IVAAGMGPIVALKYFRYTY 970 (1060)
Q Consensus 952 ~~~~~llp~~i~k~~~~~~ 970 (1060)
+.+++++...+.|++.+.|
T Consensus 974 ~~~~~~~~~e~~k~~~r~~ 992 (995)
T 3ar4_A 974 ISLPVIGLDEILKFIARNY 992 (995)
T ss_dssp HHTHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHCC
T ss_conf 9999999999999994117
No 4
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=1.00 E-value=1 Score=814.26 Aligned_cols=767 Identities=16% Similarity=0.173 Sum_probs=530.8
Q ss_pred CCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 22356899643367785321017999999987999999999999871154566773014577899999999999999998
Q 001525 12 TSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNR 91 (1060)
Q Consensus 12 ~~~~~~g~N~i~~~k~~~~~f~~~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~~l~~i~~is~i~~~~~d~~r 91 (1060)
+|+++||.|+++.+++++| +.+++||.+++++++++.++++++.. .+.....++++++++++.++++++++
T Consensus 95 ~r~~~~G~N~l~~~~~~~~----~~~l~~f~~~~~~ll~~aai~s~~~g-----~~~~~~~i~~vv~i~~~i~~~qe~~a 165 (920)
T 1mhs_A 95 QRRRKYGLNQMKEEKENHF----LKFLGFFVGPIQFVMEGAAVLAAGLE-----DWVDFGVICGLLLLNAVVGFVQEFQA 165 (920)
T ss_dssp HHHHHTSSSSCCCCCCSSH----HHHTHHHHHHHHHHHHHHHHHCTTCS-----CSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999639981588888899----99999998799999999999999997-----68999999999999999999999999
Q ss_pred HHHHHHH---CCEEEEEEECCEEEEEECCCCCCCEEEEEECCCEECCEEEEEECCCCCCEEEEEECCCCCCCCCEEECCC
Q ss_conf 4523865---1508899979939997415784470999818964042199960379996089980467786671550364
Q 001525 92 YLSDKKA---NEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIP 168 (1060)
Q Consensus 92 ~~~~~~~---n~~~~~V~r~g~~~~i~~~~i~vGDII~l~~ge~iPaD~ill~ss~~~G~~~Vd~s~LtGEs~~~~k~~~ 168 (1060)
.++.+.+ .+.+++|+|||++++|++++|+|||+|.|++||+||||++++++++ .+.||||.|||||.|+.|.++
T Consensus 166 ~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~---~l~VDES~LTGES~PV~K~~g 242 (920)
T 1mhs_A 166 GSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDA---FLQVDQSALTGESLAVDKHKG 242 (920)
T ss_dssp HHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESS---CCEEBCTTTSSCCCCEECCSS
T ss_pred HHHHHHHHCCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCCCCCCEEEEECCC---EEEEECCCCCCCCCCEEECCC
T ss_conf 99999863359987999989989998989958897899677973366569994572---232022224788864693479
Q ss_pred CCCCCCCHHHHCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCEECCCCCEEEECCEECCCCEEEEEEEECCCCCCCC
Q ss_conf 10127896421350789993489875420002576469988997000255742540010025644999988302421001
Q 001525 169 AACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTAGNVWKD 248 (1060)
Q Consensus 169 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~n~llrg~~l~~t~~~~givi~t~~~~~~~ 248 (1060)
+.+++|+.+..|.+.++|+.+|.+|.++++...+.. ....+.|++..-..+ +..+. .+++.....+|..
T Consensus 243 d~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~----a~~~~~~l~~~~~~i-~~~l~------~~~~~~~~i~~~~ 311 (920)
T 1mhs_A 243 DQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNA----ASGGSGHFTEVLNGI-GTILL------ILVIFTLLIVWVS 311 (920)
T ss_dssp CEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCC----CCCCCCHHHHHHHHH-HHHHH------HHHHHHHHHHHHT
T ss_pred CEEECCCEEECCEEEEEEEEECCCCHHHHHHHHHHH----CCCCCCHHHHHHHHH-HHHHH------HHHHHHHHHHHHH
T ss_conf 863037669513599999995776788899887764----246776499999999-99999------9999999999999
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 44451488736888722345586788998750113542440278999999987855620879999987544585331123
Q 001525 249 TEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDL 328 (1060)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iPisl~v~l~~~~~~~~~~i~~d~~~~~~~~~~~~~~k~~~~~e~L 328 (1060)
| +....++...+...++ +++.++|++|++.+.++...++..+.++ ++++|+++.+|+|
T Consensus 312 ------~---~~~~~~~~~~l~~av~---llV~aiP~aLp~~vti~la~g~~~mak~----------~ilvk~~~aiE~L 369 (920)
T 1mhs_A 312 ------S---FYRSNPIVQILEFTLA---ITIIGVPVGLPAVVTTTMAVGAAYLAKK----------KAIVQKLSAIESL 369 (920)
T ss_dssp ------T---TTTTCCHHHHHHHHHH---HHHHHSCCCHHHHHHHHHHHHHHHHHHT----------TCCCCCTTTHHHH
T ss_pred ------H---HHCCCCHHHHHHHHHH---HHHHHCCHHHHHHHHHHHHHHHHHHHHC----------CEEEECCCHHHHH
T ss_conf ------8---8468869999999999---9987676037777899999999999868----------8387057135554
Q ss_pred CCCEEEEEECCCCCCCCCEEEEEEEECCEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCEEECCCCCCCCEEE
Q ss_conf 57059994177522447258989999697616987777785334654205990199999998620400035588983688
Q 001525 329 AQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILY 408 (1060)
Q Consensus 329 G~v~~I~~DKTGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~ 408 (1060)
|++++||||||||||+|+|+|.+++..+. + ++ .+++.+.++|++... .
T Consensus 370 g~v~vIc~DKTGTLT~n~m~v~~~~~~~g-~--------------------~~--~~ll~~a~l~~~~~~----~----- 417 (920)
T 1mhs_A 370 AGVEILCSDKTGTLTKNKLSLHDPYTVAG-V--------------------DP--EDLMLTACLAASRKK----K----- 417 (920)
T ss_dssp HTCCEEEEETBTTTBSSCSCCCCCBCCSC-C--------------------CC--THHHHHHHHSCCCSS----C-----
T ss_pred CCCCEEEECCCCCCCCCCEEEEEEEECCC-C--------------------CH--HHHHHHHHHHCCCCC----C-----
T ss_conf 36768997788875555316999850699-8--------------------98--999999998547766----6-----
Q ss_pred ECCCCCHHHHHHHHHHCCCEEEEECCCEEEEEECCEEEEEEEEEEECCCCCCEEEEEEEEECCCCCEEEEECCHHHHCCC
Q ss_conf 40694199999999836909973369679999789078999989860779980389999958999389992571331020
Q 001525 409 KAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP 488 (1060)
Q Consensus 409 ~~~~p~e~aLv~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~i~~ 488 (1060)
.+||+|.|+++++.+.+.. .+....|++++.+||+|.||+|+++++.+ +|+.++++||||+.+++
T Consensus 418 -~~~P~e~Al~~~~~~~~~~-------------~~~~~~~~~~~~~pF~s~~k~ms~iv~~~-~g~~~~~~KGape~il~ 482 (920)
T 1mhs_A 418 -GIDAIDKAFLKSLKYYPRA-------------KSVLSKYKVLQFHPFDPVSKKVVAVVESP-QGERITCVKGAPLFVLK 482 (920)
T ss_dssp -SCCSHHHHHHHHHHHSSSC-------------CGGGSCCCEEEEEEEETTTTEEEEEECCS-SSSCEEEEEECHHHHHH
T ss_pred -CCCHHHHHHHHHHHHCCCC-------------HHHCCCCCEEEEEECCCCCCEEEEEEEEC-CCCEEEEEECCHHHHHH
T ss_conf -8985899999999964631-------------01013553357861167788599999967-99189999087999998
Q ss_pred HHCCCC-----CHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 000598-----367999999999862552789999834988999999999997200002899999999971038189899
Q 001525 489 YAHAGQ-----QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGV 563 (1060)
Q Consensus 489 ~~~~~~-----~~~~~~~~~~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~ 563 (1060)
+|.... .++.+.+++++++.+|+|+|++|+|.. |.+++++|+
T Consensus 483 ~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~---------------------------------e~~l~~lGl 529 (920)
T 1mhs_A 483 TVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG---------------------------------EGSWEILGI 529 (920)
T ss_dssp HCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS---------------------------------SCSCCCCBB
T ss_pred HCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECC---------------------------------CCCCEEEEE
T ss_conf 61356789878899899999999867997999998326---------------------------------653078899
Q ss_pred EEEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 85412579993999999998599699993799657999999869888999970899849868899999999997610147
Q 001525 564 TAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITT 643 (1060)
Q Consensus 564 i~i~D~lr~~v~~~I~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (1060)
++++||+|++++++|+.|+++||++||+|||+..||.++|+++|+.....+..-..+.|..
T Consensus 530 i~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~~------------------- 590 (920)
T 1mhs_A 530 MPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGG------------------- 590 (920)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBCC-------------------
T ss_pred EEEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCC-------------------
T ss_conf 9973432101799999986257449998389789999999984999654675412422765-------------------
Q ss_pred CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCEE
Q ss_conf 99985699993724899999999998855201351289980923099999998836992999938966778776179007
Q 001525 644 SEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV 723 (1060)
Q Consensus 644 ~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sp~qK~~iV~~lk~~~~~vl~iGDG~NDv~ml~~AdvGI 723 (1060)
.++++. +.+ ...+..+++|++|+||..+|+.+|+.|+.|+|+|||.||+|||++||+||
T Consensus 591 --------~~~~~e-----------l~~--~~~~~~V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGI 649 (920)
T 1mhs_A 591 --------DMPGSE-----------VYD--FVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGI 649 (920)
T ss_dssp --------CGGGGG-----------GGT--TTTTTSCEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEE
T ss_pred --------CCCHHH-----------HHH--HHHHCEEEEEECHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCC
T ss_conf --------589899-----------998--77518199983799999999999967996999828810099998578674
Q ss_pred EECCCCHHHHHHHCCEEECCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 744872688974425640352102578-8761124468888888888777899999999999772045631134678989
Q 001525 724 GISGREGLQAARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMA 802 (1060)
Q Consensus 724 ~i~g~~~~~a~~~aD~vi~~~~~l~~l-ll~~Gr~~~~r~~~~i~~~~~k~i~~~~~~~~~~~~~~~~g~~~~~~~~l~~ 802 (1060)
+| |+....++++||+++.++++-... .+.+||++|+|+++++.|.++.|+......++...+ .|.+ +++.+++|
T Consensus 650 Am-g~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~---~~~~-l~~~~il~ 724 (920)
T 1mhs_A 650 AV-EGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAI---LNRS-LNIELVVF 724 (920)
T ss_dssp EE-TTSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS---CSCC-CCHHHHHH
T ss_pred CC-CCCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHCC-CCHHHHHH
T ss_conf 05-6433999984680776797778999999999999999998788979999999999999999---9616-87999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECC--C---CCCE
Q ss_conf 8788535768765405789903341187111133578667846799998899999999999865301025--6---5530
Q 001525 803 YNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYE--K---SEME 877 (1060)
Q Consensus 803 ~n~~~~~lp~~~~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~i~~~~~~~~~~~~--~---~~~~ 877 (1060)
.|++.+. |++++++|+ .+.. +.|..+. ....+. ..+..+++.++..++..+..+... . ....
T Consensus 725 ~~l~~d~-~~lal~~e~--~~~~--~~P~~~~---~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (920)
T 1mhs_A 725 IAIFADV-ATLAIAYDN--APYS--QTPVKWN---LPKLWG-----MSVLLGVVLAVGTWITVTTMYAQGENGGIVQNFG 791 (920)
T ss_dssp HHHHHTT-HHHHCCCCC--SGGG--GSCCCCC---SSSCSS-----CHHHHHHHHHHHHHHHHHHHTTTTTTCCSSSSSS
T ss_pred HHHHHHH-HHHHHCCCC--CCCC--CCCCCCH---HHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
T ss_conf 9999877-766513567--6434--5887840---898999-----9999999999999999999998354565332066
Q ss_pred EEEEEHHHHHHHHHHHHHH---HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC-CHHHHHHHHHHH
Q ss_conf 4200021468999988764---322431278899999899999999999830698506899999705-966889999999
Q 001525 878 EVSMVALSGCIWLQAFVVA---LETNSFTVFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS-QPSYWITMFLIV 953 (1060)
Q Consensus 878 ~~~~~~~~~~i~~~~~~v~---l~~~~~~~~~~~~i~~si~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~~w~~~ll~~ 953 (1060)
...+++|...++.+.+++. .....|.-..++.+++++++..++...+.++|.+ ...+ ++..|+.+++..
T Consensus 792 ~~~T~~f~~lv~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f-------~~~~l~~~~~~~~~~~~ 864 (920)
T 1mhs_A 792 NMDEVLFLQISLTENWLIFITRANGPFWSSIPSWQLSGAIFLVDILATCFTIWGWF-------EHSDTSIVAVVRIWIFS 864 (920)
T ss_dssp SHHHHHHHHHHHHHHHHTTSSSCSSSCSCCSCTHHHHHHHHHHHHHHHHHHSSSST-------TSCSHHHHTHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH-------CCCCCCHHHHHHHHHHH
T ss_conf 78999999999999999998503605403755999999999999999999976563-------16788999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 998899999999868
Q 001525 954 AAGMGPIVALKYFRY 968 (1060)
Q Consensus 954 ~~~llp~~i~k~~~~ 968 (1060)
++.++...+.|++..
T Consensus 865 ~~~~~~~e~~k~~~~ 879 (920)
T 1mhs_A 865 FGIFCIMGGVYYILQ 879 (920)
T ss_dssp THHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999999999999986
No 5
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=1.00 E-value=1 Score=799.78 Aligned_cols=681 Identities=18% Similarity=0.205 Sum_probs=493.1
Q ss_pred CCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2235689964336778532101799999998799999999999987115456--67730145778999999999999999
Q 001525 12 TSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITP--VNPASTWGPLIFIFAVSATKEAWDDY 89 (1060)
Q Consensus 12 ~~~~~~g~N~i~~~k~~~~~f~~~~l~~qf~~~~n~~~l~~~il~~~~~~~~--~~~~~~~~~l~~i~~is~i~~~~~d~ 89 (1060)
+|+++||+|+++.+++++| +.+++||.+|+++++++.++++++..... ...+...+.++++++++.+.++++++
T Consensus 40 ~r~~~~G~N~l~~~~~~~~----~~~l~~~~~p~~~il~~aaiis~~l~~~~~~~~~~~~~~~I~~~v~i~~~l~~~qe~ 115 (885)
T 3b8c_A 40 DRIQIFGPNKLEEKKESKL----LKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEEN 115 (885)
T ss_dssp HHSSSCCSCCTTTTCCCTT----SSTTSCCCGGGSSHHHHHHHGGGGSSCCTTSCSCCTTHHHHHHHTTTTTTTTTTTTT
T ss_pred HHHHHCCCCCCCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9998519971588788799----999999999999999999999999970456630188999999999999999999999
Q ss_pred HHHHHHH---HHCCEEEEEEECCEEEEEECCCCCCCEEEEEECCCEECCEEEEEECCCCCCEEEEEECCCCCCCCCEEEC
Q ss_conf 9845238---6515088999799399974157844709998189640421999603799960899804677866715503
Q 001525 90 NRYLSDK---KANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL 166 (1060)
Q Consensus 90 ~r~~~~~---~~n~~~~~V~r~g~~~~i~~~~i~vGDII~l~~ge~iPaD~ill~ss~~~G~~~Vd~s~LtGEs~~~~k~ 166 (1060)
+..++.+ ++.+.+++|+|||++++|++++|+|||+|.|++||+||||++++++++ +.||||.|||||.|+.|.
T Consensus 116 ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~----l~VdES~LTGES~Pv~K~ 191 (885)
T 3b8c_A 116 NAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP----LKVDQSALTGESLPVTKH 191 (885)
T ss_dssp TTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCSSC----BCCCCCSTTCCSSCCCBS
T ss_pred HHHHHHHHHHCCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEEECEEEEECCC----CCCCCCCCCCCCCCEEEC
T ss_conf 9999999973349986999999989998989979897899889999930359997675----400344468888645834
Q ss_pred CCCCCCCCCHHHHCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCEECCCCCEEEECCEECCCCEEEEEEEECCCCCC
Q ss_conf 64101278964213507899934898754200025764699889970002557425400100256449999883024210
Q 001525 167 IPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTAGNVW 246 (1060)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~n~llrg~~l~~t~~~~givi~t~~~~~ 246 (1060)
+++.+++|+.+..|.+.++|+.+|.+|.++++...++. ...+.|++..-..+....+.. .++++++.+. ..|
T Consensus 192 ~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~-----~~~~~~lq~~~~~i~~~~~~~--~~~~~~~~~~-~~~ 263 (885)
T 3b8c_A 192 PGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-----TNQVGHFQKVLTAIGNFCICS--IAIGMVIEII-VMY 263 (885)
T ss_dssp SCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS-----CSCCSTTTTTTHHHHHHHHHH--HHHHHHHHST-TTT
T ss_pred CCCCCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHC-----CCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHH-HHH
T ss_conf 89830267599511799999975730199999999864-----644684999999999999999--9999999999-999
Q ss_pred CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 01444514887368887223455867889987501135424402789999999878556208799999875445853311
Q 001525 247 KDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISE 326 (1060)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iPisl~v~l~~~~~~~~~~i~~d~~~~~~~~~~~~~~k~~~~~e 326 (1060)
+. ...++...+.. ++.+++.++|++|++.++++...++. +|.+. ++++|+++.+|
T Consensus 264 ---------~~---~~~~~~~~~~~---~v~llv~aiP~aLp~~vti~la~g~~------r~ak~----~ilvk~~~aiE 318 (885)
T 3b8c_A 264 ---------PI---QRRKYRDGIDN---LLVLLIGGIPIAMPTVLSVTMAIGSH------RLSQQ----GAITKRMTAIE 318 (885)
T ss_dssp ---------TT---TCSCSTTHHHH---HHHHTTTTCCSSTTTHHHHTTTHHHH------HHTTT----SCCCSSGGGHH
T ss_pred ---------HH---CCCCHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHC----CEEECCCHHHH
T ss_conf ---------98---06869999999---99999997036899999999999999------99719----86968951888
Q ss_pred CCCCCEEEEEECCCCCCCCCEEEEEEEECCEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCEEECCCCCCCCE
Q ss_conf 23570599941775224472589899996976169877777853346542059901999999986204000355889836
Q 001525 327 DLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAI 406 (1060)
Q Consensus 327 ~LG~v~~I~~DKTGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~ 406 (1060)
+||++++||||||||||+|+|+|.++.+. .++. ..+..+++...++|+...
T Consensus 319 ~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~~~------------------~~~~~~ll~~aa~~~~~~--------- 369 (885)
T 3b8c_A 319 EMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VFCK------------------GVEKDQVLLFAAMASRVE--------- 369 (885)
T ss_dssp HHTTCCCCEEECCCCCSCCCCCCCSCCCC--SSCS------------------STTHHHHHHHHHHHCCSS---------
T ss_pred HHHCCCEEEECCCCCCCCCCEEEEEEEEE--CCCC------------------CCCHHHHHHHHHHHHCCC---------
T ss_conf 97679989987998761685279987775--1589------------------999999999999972788---------
Q ss_pred EEECCCCCHHHHHHHHHHCCCEEEEECCCEEEEEECCEEEEEEEEEEECCCCCCEEEEEEEEECCCCCEEEEECCHHHHC
Q ss_conf 88406941999999998369099733696799997890789999898607799803899999589993899925713310
Q 001525 407 LYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAI 486 (1060)
Q Consensus 407 ~~~~~~p~e~aLv~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~i 486 (1060)
.+||.|.|+++++.+.. .....+++++.+||+|.||||+++++.. +|+.++++||||+.+
T Consensus 370 ---~~~p~~~Al~~~~~~~~----------------~~~~~~~~~~~~pF~s~~k~~sv~~~~~-~g~~~~~~KGa~e~i 429 (885)
T 3b8c_A 370 ---NQDAIDAAMVGMLADPK----------------EARAGIREVHFLPFNPVDKRTALTYIDG-SGNWHRVSKGAPEQI 429 (885)
T ss_dssp ---SCCSHHHHHHHTTCCTT----------------CCCCSSCCBCCCCCCTTTCCCCCBBCSS-SSCBCBCCCCSGGGT
T ss_pred ---CCCCHHHHHHHHHHCHH----------------HHHHCCCEEECCCCCCCCCEEEEEEEEC-CCCEEEEEECCHHHH
T ss_conf ---99915899999864636----------------5762483220135785225689999804-896899994889999
Q ss_pred CCHHCCC-CCHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf 2000059-836799999999986255278999983498899999999999720000289999999997103818989985
Q 001525 487 LPYAHAG-QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTA 565 (1060)
Q Consensus 487 ~~~~~~~-~~~~~~~~~~~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~ 565 (1060)
+++|... ..++.+.+++++++.+|+|++++|+|++++++. +..|+|++++|+++
T Consensus 430 l~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~-------------------------~~~e~~l~~lGli~ 484 (885)
T 3b8c_A 430 LELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTK-------------------------ESPGAPWEFVGLLP 484 (885)
T ss_dssp SSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSS-------------------------SCCCCCCCCCEEEE
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCC-------------------------CCCCCCCEEEEEEE
T ss_conf 97645864457999999999985798699999944664331-------------------------11356757999999
Q ss_pred EECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 41257999399999999859969999379965799999986988899997089984986889999999999761014799
Q 001525 566 IEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSE 645 (1060)
Q Consensus 566 i~D~lr~~v~~~I~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (1060)
++||+|++++++|+.|+++||+++|+|||+..||..+|+++|+..+...... +.|.+.++.
T Consensus 485 i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~--l~g~~~~~~----------------- 545 (885)
T 3b8c_A 485 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA--LLGTHKDAN----------------- 545 (885)
T ss_dssp ECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSS--CCBGGGGTT-----------------
T ss_pred EECCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCE--EECCCCCCC-----------------
T ss_conf 6066612089999999976996899939986999999998097646677514--455531222-----------------
Q ss_pred CCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCEEEE
Q ss_conf 98569999372489999999999885520135128998092309999999883699299993896677877617900774
Q 001525 646 PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 725 (1060)
Q Consensus 646 ~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sp~qK~~iV~~lk~~~~~vl~iGDG~NDv~ml~~AdvGI~i 725 (1060)
+++..++.. ..+..+++|++|+||..+|+.+|+.|+.|+|+|||.||+|||++||+||+|
T Consensus 546 -------~~~~~l~~~-------------~~~~~v~arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAm 605 (885)
T 3b8c_A 546 -------LASIPVEEL-------------IEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAV 605 (885)
T ss_dssp -------SCCSCHHHH-------------HHTSCCEECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCC
T ss_pred -------CCHHHHHHH-------------HHHCCEEEEECHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCEEEEE
T ss_conf -------463579999-------------863868988789999999999997799699975981229999869975995
Q ss_pred CCCCHHHHH-HHCCEEECCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 487268897-4425640352102578-87611244688888888887778999999999997720456311346789898
Q 001525 726 SGREGLQAA-RAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAY 803 (1060)
Q Consensus 726 ~g~~~~~a~-~~aD~vi~~~~~l~~l-ll~~Gr~~~~r~~~~i~~~~~k~i~~~~~~~~~~~~~~~~g~~~~~~~~l~~~ 803 (1060)
|+ |++++ ++||+++.++++.... .+.+||++|+|+++.+.|.+..|+...+..++..+ ++ ..++.+++++|.
T Consensus 606 -g~-gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~~~~--~~--~~~l~p~~il~i 679 (885)
T 3b8c_A 606 -AD-ATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIAL--IW--EFDFSAFMVLII 679 (885)
T ss_dssp -SS-SHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHHHTTTTTSTTHHHHS--SC--SSCSCHHHHHHH
T ss_pred -CC-CCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CC--CCCCCHHHHHHH
T ss_conf -77-1299998434013357666899999999999999999999999999999999999997--03--867588999999
Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78853576876540578990334118711113357866784679999889999999999986
Q 001525 804 NVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVIS 865 (1060)
Q Consensus 804 n~~~~~lp~~~~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~i~~~~~ 865 (1060)
|++.+..+ +.+.+|+ .+.. +.|. .......++.++..+++.++..+++.
T Consensus 680 ~l~~d~~~-l~l~~~~--~~~~--~~p~--------~~~~~~~~~~~~~~g~~~~~~~~~~~ 728 (885)
T 3b8c_A 680 AILNDGTI-MTISKDR--VKPS--PTPD--------SWKLKEIFATGVVLGGYQAIMTVIFF 728 (885)
T ss_dssp HHHHHTTT-CCCCCCC--CCCS--SCCC--------STTTTTTTTTHHHHHSSTHHHHTTSS
T ss_pred HHHHHHHH-HHHCCCC--CCCC--CCCC--------CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99987778-7404654--6754--5873--------03589999999999999999999999
No 6
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=1.00 E-value=1 Score=554.49 Aligned_cols=499 Identities=19% Similarity=0.219 Sum_probs=376.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHCCEEEEEEE-CCEEEEEECCCCCCCEEEEEECCCEECCEEEEEE
Q ss_conf 1457789999999999999999845238------65150889997-9939997415784470999818964042199960
Q 001525 69 TWGPLIFIFAVSATKEAWDDYNRYLSDK------KANEKEVWVVK-QGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIG 141 (1060)
Q Consensus 69 ~~~~l~~i~~is~i~~~~~d~~r~~~~~------~~n~~~~~V~r-~g~~~~i~~~~i~vGDII~l~~ge~iPaD~ill~ 141 (1060)
++-...+++++..+..++|++.+.++.+ ++.+.+++++| ||++++|++++|+|||+|+|++||+|||||+++
T Consensus 187 yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl- 265 (736)
T 3rfu_A 187 YFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQ- 265 (736)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEEC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEHHHCCCCCEEEECCCCCCCCCEEEE-
T ss_conf 8999999999999999999999999999999988339988999952998999877668989889987997515637999-
Q ss_pred CCCCCCEEEEEECCCCCCCCCEEECCCCCCCCCCHHHHCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCEECCCCCE
Q ss_conf 37999608998046778667155036410127896421350789993489875420002576469988997000255742
Q 001525 142 TSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNT 221 (1060)
Q Consensus 142 ss~~~G~~~Vd~s~LtGEs~~~~k~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~n~ 221 (1060)
+|.++||||.|||||.|+.|.+++.+.+++.+..|.+.++|+.+|.+|.++++...+.. ....+.|++....
T Consensus 266 ----~G~~~VDES~LTGES~Pv~K~~gd~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~----a~~~k~~~q~~~d 337 (736)
T 3rfu_A 266 ----EGRSFVDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSD----AQRSRAPIQRLAD 337 (736)
T ss_dssp ----SSCEEEECSSSTTCSSCEEECTTCEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHH----HHSSCCCCCCHHH
T ss_pred ----ECCEEEEECCCCCCCCCEEECCCCCCCCCEEECCCEEEEEEEEECHHHHHHHHHHHHHH----HHHCCCHHHHHHH
T ss_conf ----78667651235786142783168867786486145099999984122599999999997----4326897999999
Q ss_pred EEECCEECCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHH
Q ss_conf 54001002564499998830242100144451488736888722345586788998750113542440278999999987
Q 001525 222 ILQSCYLRNTEWACGVAVYTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKF 301 (1060)
Q Consensus 222 llrg~~l~~t~~~~givi~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iPisl~v~l~~~~~~~~~~ 301 (1060)
.+.+.. +..++++++.++. . |++.. ....+...+...++ ++...+|++|++++.++.......
T Consensus 338 ~~a~~~---v~~vl~ia~~~~~-~---------w~~~~-~~~~~~~~l~~ai~---vlviacPcaL~la~p~a~~~~~~~ 400 (736)
T 3rfu_A 338 TVSGWF---VPAVILVAVLSFI-V---------WALLG-PQPALSYGLIAAVS---VLIIACPCALGLATPMSIMVGVGK 400 (736)
T ss_dssp HHHHHH---HHHHHHHHHHHHH-H---------HHHHC-SSSSTTHHHHHHHH---HHHHHCCSTHHHHHHHHHHHHHHH
T ss_pred HHHHHH---HHHHHHHHHHHHH-H---------HHHHC-CCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999---9999999999999-9---------99967-87329999999877---487732427888899999999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCEEECCCCCCCCCCHHHHHHHHCCCC
Q ss_conf 85562087999998754458533112357059994177522447258989999697616987777785334654205990
Q 001525 302 IDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSP 381 (1060)
Q Consensus 302 i~~d~~~~~~~~~~~~~~k~~~~~e~LG~v~~I~~DKTGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~ 381 (1060)
... .++++|+.+.+|+||++++||||||||||+|+|++.++..++.
T Consensus 401 ~a~----------~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~------------------------ 446 (736)
T 3rfu_A 401 GAQ----------SGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVTDDF------------------------ 446 (736)
T ss_dssp HHH----------TTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEESSS------------------------
T ss_pred HHH----------CCEEECHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEECCC------------------------
T ss_conf 751----------5133233789998627999998189887589527999983488------------------------
Q ss_pred CHHHHHHHHHHCCEEECCCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEEECCCEEEEEECCEEEEEEEEEEECCCCCCE
Q ss_conf 19999999862040003558898368840694199999999836909973369679999789078999989860779980
Q 001525 382 DVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRK 461 (1060)
Q Consensus 382 ~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~p~e~aLv~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rk 461 (1060)
...+++...+.+. +.++||.+.|+++++++.|..+. ...+|++.++
T Consensus 447 ~~~~~l~~aa~le-------------~~s~hPla~Aiv~~a~~~~~~~~---------------------~~~~f~~~~g 492 (736)
T 3rfu_A 447 VEDNALALAAALE-------------HQSEHPLANAIVHAAKEKGLSLG---------------------SVEAFEAPTG 492 (736)
T ss_dssp CHHHHHHHHHHHH-------------HSSCCHHHHHHHHHHHTTCCCCC---------------------CCSCCCCCTT
T ss_pred CHHHHHHHHHHHH-------------HCCCCHHHHHHHHHHHHCCCCCC---------------------CCCCCCCCCC
T ss_conf 7789999999986-------------22899289999999996599866---------------------7543202488
Q ss_pred EEEEEEEECCCCCEEEEECCHHHHCCCHHCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHCCCC
Q ss_conf 38999995899938999257133102000059836799999999986255278999983498899999999999720000
Q 001525 462 RMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLI 541 (1060)
Q Consensus 462 rmsviv~~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~~~~~~~ 541 (1060)
+... .. . +|+. +.+|+++.+.+... ....+.+..++++.+|+|++++|+
T Consensus 493 ~gv~-~~-~-~g~~--~~~G~~~~~~~~~~---~~~~~~~~~~~~~~~G~~vl~va~----------------------- 541 (736)
T 3rfu_A 493 KGVV-GQ-V-DGHH--VAIGNARLMQEHGG---DNAPLFEKADELRGKGASVMFMAV----------------------- 541 (736)
T ss_dssp TEEE-EC-S-SSSC--EEEESHHHHHHHCC---CCHHHHHHHHHHHHTTCEEEEEEE-----------------------
T ss_pred CEEE-EE-E-CCEE--EEECCHHHHHHCCC---CHHHHHHHHHHHHHCCCEEEEEEE-----------------------
T ss_conf 6589-99-9-9989--99738999987399---716789999999856986999987-----------------------
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEEC
Q ss_conf 28999999999710381898998541257999399999999859969999379965799999986988899997089984
Q 001525 542 DREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSID 621 (1060)
Q Consensus 542 ~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~v~~~I~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~ 621 (1060)
|.+++|+++++|++|++++++|+.|+++||+++|+|||+..+|..+|+++|+.
T Consensus 542 ---------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~------------ 594 (736)
T 3rfu_A 542 ---------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK------------ 594 (736)
T ss_dssp ---------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCC------------
T ss_pred ---------------CCEEEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCC------------
T ss_conf ---------------99899999850322030999999999879949998798989999999985998------------
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCC
Q ss_conf 98688999999999976101479998569999372489999999999885520135128998092309999999883699
Q 001525 622 GKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDY 701 (1060)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sp~qK~~iV~~lk~~~~ 701 (1060)
.++++++|++|..+|+.+|+.++
T Consensus 595 ---------------------------------------------------------~v~a~~~P~~K~~~v~~l~~~g~ 617 (736)
T 3rfu_A 595 ---------------------------------------------------------KVVAEIMPEDKSRIVSELKDKGL 617 (736)
T ss_dssp ---------------------------------------------------------CEECSCCHHHHHHHHHHHHHHSC
T ss_pred ---------------------------------------------------------EEEEECCHHHHHHHHHHHHHCCC
T ss_conf ---------------------------------------------------------79970699999999999996699
Q ss_pred EEEEECCCCCCHHHHHHCCCEEEECCCCHHHHHHHCCEEECCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2999938966778776179007744872688974425640352102578-876112446888888888877789999
Q 001525 702 RTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLIC 777 (1060)
Q Consensus 702 ~vl~iGDG~NDv~ml~~AdvGI~i~g~~~~~a~~~aD~vi~~~~~l~~l-ll~~Gr~~~~r~~~~i~~~~~k~i~~~ 777 (1060)
.|+|+|||.||+|||++||+||+| |+....++++||+++.+.++.... .+.+||..++++++.+.|.+..|++..
T Consensus 618 ~V~~vGDG~ND~paL~~AdvGIAm-g~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~i 693 (736)
T 3rfu_A 618 IVAMAGDGVNDAPALAKADIGIAM-GTGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLGV 693 (736)
T ss_dssp CEEEEECSSTTHHHHHHSSEEEEE-SSSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHCCEEEEE-CCCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 899998985769999869977994-7865999976999992698789999999999999999999999999999999
No 7
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=1.00 E-value=1 Score=544.79 Aligned_cols=491 Identities=17% Similarity=0.219 Sum_probs=368.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH------HHHCCEEEEEEECCEEEEEECCCCCCCEEEEEECCCEECCEEEEEECCCC
Q ss_conf 778999999999999999984523------86515088999799399974157844709998189640421999603799
Q 001525 72 PLIFIFAVSATKEAWDDYNRYLSD------KKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDP 145 (1060)
Q Consensus 72 ~l~~i~~is~i~~~~~d~~r~~~~------~~~n~~~~~V~r~g~~~~i~~~~i~vGDII~l~~ge~iPaD~ill~ss~~ 145 (1060)
..++++++..+.+++|++.++++. .++.+.+++|+|||++++|++++|+|||+|+|++||+|||||+++
T Consensus 176 ~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl----- 250 (723)
T 3j09_A 176 TSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVV----- 250 (723)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEE-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEEEEEEEE-----
T ss_conf 999999999999999999999999999888726997569998998999898997999899988999885679999-----
Q ss_pred CCEEEEEECCCCCCCCCEEECCCCCCCCCCHHHHCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCEECCCCCEEEEC
Q ss_conf 96089980467786671550364101278964213507899934898754200025764699889970002557425400
Q 001525 146 QGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQS 225 (1060)
Q Consensus 146 ~G~~~Vd~s~LtGEs~~~~k~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~n~llrg 225 (1060)
+|.|+||||+|||||.|+.|++++.+.+|+.+..+.+.++|+.+|.++.++++...++. ....+.|++.....+..
T Consensus 251 ~G~~~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~----a~~~k~~~~~~~d~~~~ 326 (723)
T 3j09_A 251 EGESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVED----AMGSKPPIQRLADKVVA 326 (723)
T ss_dssp ECCEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSS----SCCSCCHHHHHHHHHHH
T ss_pred ECCEEEECCCCCCCCCCEEECCCCEECCCEEEECCCEEEEEEEECCCCHHHHHHHHHHH----HHCCCCHHHHHHHHHHH
T ss_conf 77768860001388764663689823041697067299999984674399999999997----53469838999999999
Q ss_pred CEECCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHH
Q ss_conf 10025644999988302421001444514887368887223455867889987501135424402789999999878556
Q 001525 226 CYLRNTEWACGVAVYTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWD 305 (1060)
Q Consensus 226 ~~l~~t~~~~givi~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iPisl~v~l~~~~~~~~~~i~~d 305 (1060)
.. +..++.+.+.+.. . |++. ...++...+...++ ++...+|++|++++.++...+.....
T Consensus 327 ~~---~~~vl~~a~~~~~-~---------~~~~--~~~~~~~~~~~~i~---vlvia~P~aL~la~p~a~~~~~~~~a-- 386 (723)
T 3j09_A 327 YF---IPTVLLVAISAFI-Y---------WYFI--AHAPLLFAFTTLIA---VLVVACPCAFGLATPTALTVGMGKGA-- 386 (723)
T ss_dssp HH---HHHHHHHHHHHHT-T---------SCSS--TTCTTCCSHHHHHH---HHHHHSCTTHHHHHHHHHHHHHHHHH--
T ss_pred HH---HHHHHHHHHHHHH-H---------HHHH--CCCCHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_conf 99---9999999999999-9---------9985--68869999999999---99750267899999999999999999--
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCEEECCCCCCCCCCHHHHHHHHCCCCCHHH
Q ss_conf 20879999987544585331123570599941775224472589899996976169877777853346542059901999
Q 001525 306 YEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIR 385 (1060)
Q Consensus 306 ~~~~~~~~~~~~~~k~~~~~e~LG~v~~I~~DKTGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (1060)
+ .++++|+++.+|+||++++||||||||||+|+|++.++...+. +..+
T Consensus 387 ----~----~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~------------------------~~~~ 434 (723)
T 3j09_A 387 ----E----LGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG------------------------DERE 434 (723)
T ss_dssp ----T----TTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSS------------------------CHHH
T ss_pred ----H----CCEEEECHHHHHHHHCCCEEEECCCCCCCCCCEEEEEEEECCC------------------------CHHH
T ss_conf ----8----8938948289987624989998477755269627999980799------------------------9899
Q ss_pred HHHHHHHCCEEECCCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEEECCCEEEEEECCEEEEEEEEEEECCCCCCEEEEE
Q ss_conf 99998620400035588983688406941999999998369099733696799997890789999898607799803899
Q 001525 386 FLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSV 465 (1060)
Q Consensus 386 ~~~~l~lC~~~~~~~~~~~~~~~~~~~p~e~aLv~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsv 465 (1060)
++...+.+. ..++||++.|+++++.+.|..+..... ++. .+ .+. ...
T Consensus 435 ~l~~aa~~e-------------~~s~hP~~~Ai~~~a~~~~~~~~~~~~-------------~~~---~~---g~g-~~~ 481 (723)
T 3j09_A 435 LLRLAAIAE-------------RRSEHPIAEAIVKKALEHGIELGEPEK-------------VEV---IA---GEG-VVA 481 (723)
T ss_dssp HHHHHHHHH-------------TTCCSHHHHHHHHHHHHTTCCCCSCCC-------------CEE---ET---TTE-EEE
T ss_pred HHHHHHHHH-------------CCCCCCHHHHHHHHHHHCCCCCCCCCC-------------EEE---EC---CCC-EEE
T ss_conf 999999985-------------049995428999999854998578644-------------599---66---981-699
Q ss_pred EEEECCCCCEEEEECCHHHHCCCHHCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 99958999389992571331020000598367999999999862552789999834988999999999997200002899
Q 001525 466 VVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREW 545 (1060)
Q Consensus 466 iv~~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~~~~~~~~r~~ 545 (1060)
..+.+|+++.+.+... ...+.+.+.+++++.+|+|++++|
T Consensus 482 ----------~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~va---------------------------- 521 (723)
T 3j09_A 482 ----------DGILVGNKRLMEDFGV--AVSNEVELALEKLEREAKTAVIVA---------------------------- 521 (723)
T ss_dssp ----------TTEEEECHHHHHHTTC--CCCHHHHHHHHHHHTTTCEEEEEE----------------------------
T ss_pred ----------EEEEECCHHHHHHCCC--CCCHHHHHHHHHHHHCCCEEEEEE----------------------------
T ss_conf ----------9999778999975499--860899999999985598289997----------------------------
Q ss_pred HHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCH
Q ss_conf 99999997103818989985412579993999999998599699993799657999999869888999970899849868
Q 001525 546 RIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE 625 (1060)
Q Consensus 546 ~~~~~~~~ie~~l~llG~i~i~D~lr~~v~~~I~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~ 625 (1060)
.|++++|+++++|++|++++++|+.|+++||++||+|||+..+|..+|+++|+
T Consensus 522 ----------~~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi----------------- 574 (723)
T 3j09_A 522 ----------RNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL----------------- 574 (723)
T ss_dssp ----------ETTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTC-----------------
T ss_pred ----------ECCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCC-----------------
T ss_conf ----------89999999960687525699999999977997999999898999999998599-----------------
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCEEEE
Q ss_conf 89999999999761014799985699993724899999999998855201351289980923099999998836992999
Q 001525 626 DEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLA 705 (1060)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sp~qK~~iV~~lk~~~~~vl~ 705 (1060)
..++++++|+||..+|+.++.. +.|+|
T Consensus 575 ----------------------------------------------------~~~~~~~~P~~K~~~v~~l~~~-~~v~~ 601 (723)
T 3j09_A 575 ----------------------------------------------------DLVIAEVLPHQKSEEVKKLQAK-EVVAF 601 (723)
T ss_dssp ----------------------------------------------------SEEECSCCTTCHHHHHHHHTTT-CCEEE
T ss_pred ----------------------------------------------------CEEECCCCHHHHHHHHHHHHCC-CEEEE
T ss_conf ----------------------------------------------------3899268999999999998349-93999
Q ss_pred ECCCCCCHHHHHHCCCEEEECCCCHHHHHHHCCEEECCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 938966778776179007744872688974425640352102578-876112446888888888877789999
Q 001525 706 IGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLIC 777 (1060)
Q Consensus 706 iGDG~NDv~ml~~AdvGI~i~g~~~~~a~~~aD~vi~~~~~l~~l-ll~~Gr~~~~r~~~~i~~~~~k~i~~~ 777 (1060)
+|||.||++|+++||+||+| |++...++++||+++.++++.... .+.+||+.++++.+.+.|.+..|++..
T Consensus 602 vGDg~ND~~al~~A~vgiam-g~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~n~~~i 673 (723)
T 3j09_A 602 VGDGINDAPALAQADLGIAV-GSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILI 673 (723)
T ss_dssp EECSSTTHHHHHHSSEEEEC-CCCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHCCEEEEE-CCCCHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98982309999549987996-7875999986999996799889999999999999999999999999999999
No 8
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=1.00 E-value=1 Score=540.54 Aligned_cols=491 Identities=17% Similarity=0.219 Sum_probs=366.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH------HHHCCEEEEEEECCEEEEEECCCCCCCEEEEEECCCEECCEEEEEECCCC
Q ss_conf 778999999999999999984523------86515088999799399974157844709998189640421999603799
Q 001525 72 PLIFIFAVSATKEAWDDYNRYLSD------KKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDP 145 (1060)
Q Consensus 72 ~l~~i~~is~i~~~~~d~~r~~~~------~~~n~~~~~V~r~g~~~~i~~~~i~vGDII~l~~ge~iPaD~ill~ss~~ 145 (1060)
...+++++..+.+++|++.++++. .++.+++++|+|||++++|+++||+|||+|++++||+|||||+++
T Consensus 98 ~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl----- 172 (645)
T 3j08_A 98 TSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVV----- 172 (645)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEE-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEEEEEEEE-----
T ss_conf 999999999999999999999999999998617999799999997999889997989999988999886689999-----
Q ss_pred CCEEEEEECCCCCCCCCEEECCCCCCCCCCHHHHCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCEECCCCCEEEEC
Q ss_conf 96089980467786671550364101278964213507899934898754200025764699889970002557425400
Q 001525 146 QGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQS 225 (1060)
Q Consensus 146 ~G~~~Vd~s~LtGEs~~~~k~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~n~llrg 225 (1060)
+|.|+||||+|||||.|+.|++++.+.+|+.+..+.+.++|+.+|.++.++++...++. ...++.|++.....+..
T Consensus 173 ~G~~~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~----a~~~k~~~~~~~d~~~~ 248 (645)
T 3j08_A 173 EGESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVED----AMGSKPPIQRLADKVVA 248 (645)
T ss_dssp ECCEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSC----CCCCCCSHHHHHHHHHH
T ss_pred ECCEEEECCCCCCCCCCEECCCCCEEECCEEEECCCEEEEEEECCCCCHHHHHHHHHHH----HHCCCCHHHHHHHHHHH
T ss_conf 88689980224699876560899974166798257299999972774599999999997----31469858999999999
Q ss_pred CEECCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHH
Q ss_conf 10025644999988302421001444514887368887223455867889987501135424402789999999878556
Q 001525 226 CYLRNTEWACGVAVYTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWD 305 (1060)
Q Consensus 226 ~~l~~t~~~~givi~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iPisl~v~l~~~~~~~~~~i~~d 305 (1060)
.. +..++.+.+.+.. . |+.. ...++...+...++ ++...+|++|++++.++...+.....
T Consensus 249 ~~---~~~vl~~a~~~~~-~---------~~~~--~~~~~~~~~~~~i~---vlvia~P~aL~la~p~a~~~~~~~~a-- 308 (645)
T 3j08_A 249 YF---IPTVLLVAISAFI-Y---------WYFI--AHAPLLFAFTTLIA---VLVVACPCAFGLATPTALTVGMGKGA-- 308 (645)
T ss_dssp HH---HHHHHHHHHHHHH-C---------SSCC--CSCSCCCTTTTTHH---HHHHHSCTTHHHHHHHHHHHHHHHHH--
T ss_pred HH---HHHHHHHHHHHHH-H---------HHHH--CCCCHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_conf 99---9999999999999-9---------9995--69869999999999---99987366899999999999999999--
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCEEECCCCCCCCCCHHHHHHHHCCCCCHHH
Q ss_conf 20879999987544585331123570599941775224472589899996976169877777853346542059901999
Q 001525 306 YEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIR 385 (1060)
Q Consensus 306 ~~~~~~~~~~~~~~k~~~~~e~LG~v~~I~~DKTGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (1060)
+ .++++|+++.+|+||++++||||||||||+|+|++.++...+. +..+
T Consensus 309 ----~----~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~------------------------~~~~ 356 (645)
T 3j08_A 309 ----E----LGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG------------------------DERE 356 (645)
T ss_dssp ----T----TCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSS------------------------CHHH
T ss_pred ----H----CCEEECCCHHHHHHHCCCEEEECCCCCCCCCCEEEEEEEECCC------------------------CHHH
T ss_conf ----7----7937668169998627999998686665589707999981799------------------------9799
Q ss_pred HHHHHHHCCEEECCCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEEECCCEEEEEECCEEEEEEEEEEECCCCCCEEEEE
Q ss_conf 99998620400035588983688406941999999998369099733696799997890789999898607799803899
Q 001525 386 FLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSV 465 (1060)
Q Consensus 386 ~~~~l~lC~~~~~~~~~~~~~~~~~~~p~e~aLv~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsv 465 (1060)
++...+.|+ ..++||++.|+++++++.|........ ++. .+ .+. ...
T Consensus 357 ~l~~aa~~e-------------~~s~hPla~Aiv~~a~~~g~~~~~~~~-------------~~~---~~---g~g-~~~ 403 (645)
T 3j08_A 357 LLRLAAIAE-------------RRSEHPIAEAIVKKALEHGIELGEPEK-------------VEV---IA---GEG-VVA 403 (645)
T ss_dssp HHHHHHHHH-------------TTCCSHHHHHHHHHHHHTTCCCCSCCC-------------CEE---ET---TTE-EEE
T ss_pred HHHHHHHHH-------------HCCCCHHHHHHHHHHHHCCCCCCCCCC-------------EEE---EC---CCC-EEE
T ss_conf 999999975-------------158874679999999965998678653-------------599---65---884-699
Q ss_pred EEEECCCCCEEEEECCHHHHCCCHHCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 99958999389992571331020000598367999999999862552789999834988999999999997200002899
Q 001525 466 VVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREW 545 (1060)
Q Consensus 466 iv~~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~~~~~~~~r~~ 545 (1060)
..+.+|+++.+.+... ...+.+.+..++++.+|+|++++|
T Consensus 404 ----------~~v~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~l~va---------------------------- 443 (645)
T 3j08_A 404 ----------DGILVGNKRLMEDFGV--AVSNEVELALEKLEREAKTAVIVA---------------------------- 443 (645)
T ss_dssp ----------TTEEEECHHHHHHTTC--CCCHHHHHHHHHHHTTTCCCEEEE----------------------------
T ss_pred ----------EEEEECCHHHHHHCCC--CCCHHHHHHHHHHHHCCCEEEEEE----------------------------
T ss_conf ----------9999887999975498--751889999999985598389998----------------------------
Q ss_pred HHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCH
Q ss_conf 99999997103818989985412579993999999998599699993799657999999869888999970899849868
Q 001525 546 RIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE 625 (1060)
Q Consensus 546 ~~~~~~~~ie~~l~llG~i~i~D~lr~~v~~~I~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~ 625 (1060)
.|++++|+++++|++|++++++|+.|+++||+++|+|||+..+|..+++++|+
T Consensus 444 ----------~~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi----------------- 496 (645)
T 3j08_A 444 ----------RNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL----------------- 496 (645)
T ss_dssp ----------ETTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTC-----------------
T ss_pred ----------ECCEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCC-----------------
T ss_conf ----------89999999993487656799999999977997999908887999999998399-----------------
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCEEEE
Q ss_conf 89999999999761014799985699993724899999999998855201351289980923099999998836992999
Q 001525 626 DEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLA 705 (1060)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sp~qK~~iV~~lk~~~~~vl~ 705 (1060)
..++++++|++|..+++.+++. +.|+|
T Consensus 497 ----------------------------------------------------~~~~~~~~P~~K~~~v~~l~~~-~~v~~ 523 (645)
T 3j08_A 497 ----------------------------------------------------DLVIAEVLPHQKSEEVKKLQAK-EVVAF 523 (645)
T ss_dssp ----------------------------------------------------SEEECSCCTTCHHHHHHHHTTT-CCEEE
T ss_pred ----------------------------------------------------CEEEEECCHHHHHHHHHHHHHC-CEEEE
T ss_conf ----------------------------------------------------7899837877689999998609-95999
Q ss_pred ECCCCCCHHHHHHCCCEEEECCCCHHHHHHHCCEEECCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 938966778776179007744872688974425640352102578-876112446888888888877789999
Q 001525 706 IGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLIC 777 (1060)
Q Consensus 706 iGDG~NDv~ml~~AdvGI~i~g~~~~~a~~~aD~vi~~~~~l~~l-ll~~Gr~~~~r~~~~i~~~~~k~i~~~ 777 (1060)
+|||.||++|+++||+||+| |++...++++||+++.++++.... .+.+||+.++++++.+.|.+..|++..
T Consensus 524 vGDg~ND~~al~~A~vgiam-g~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~i 595 (645)
T 3j08_A 524 VGDGINDAPALAQADLGIAV-GSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILI 595 (645)
T ss_dssp EECSSSCHHHHHHSSEEEEE-CCCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHCCEEEEE-CCCCHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 96977689999759988994-8875999986999993699889999999999999999999999999999999
No 9
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=1.00 E-value=1 Score=204.41 Aligned_cols=249 Identities=20% Similarity=0.264 Sum_probs=169.2
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHC
Q ss_conf 98754458533112357059994177522447258989999697616987777785334654205990199999998620
Q 001525 314 DTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVC 393 (1060)
Q Consensus 314 ~~~~~~k~~~~~e~LG~v~~I~~DKTGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC 393 (1060)
..++++|+.+.+|.|+++++||||||||||+|+|.+..+. .. . +++..++
T Consensus 11 ~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~-~~-------------~--------------~~l~~~~-- 60 (263)
T 2yj3_A 11 HKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI-GD-------------S--------------LSLAYAA-- 60 (263)
Q ss_pred CEEECCCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEEECCCEEEEEECCEEEEEEEEEEECCCCCCEEEEEEEEECCCC
Q ss_conf 40003558898368840694199999999836909973369679999789078999989860779980389999958999
Q 001525 394 NTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSG 473 (1060)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~p~e~aLv~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~ 473 (1060)
.++..+.+|...|+.++++..|+..... ..++.
T Consensus 61 -----------~~e~~s~hp~a~ai~~~~~~~g~~~~~~-------------~~~~~----------------------- 93 (263)
T 2yj3_A 61 -----------SVEALSSHPIAKAIVKYAKEQGVKILEV-------------KDFKE----------------------- 93 (263)
Q ss_pred CEEEEECCHHHHCCCHHCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 38999257133102000059836799999999986255278999983498899999999999720000289999999997
Q 001525 474 NISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQR 553 (1060)
Q Consensus 474 ~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 553 (1060)
+.-+|....+-.... .+.. ..+|.+ + .
T Consensus 94 ---~~G~g~~~~~~~~~~------~~G~-----~~~~~~-~--------------------------------------~ 120 (263)
T 2yj3_A 94 ---ISGIGVRGKISDKII------EVKK-----AENNND-I--------------------------------------A 120 (263)
Q ss_pred HCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf 10381898998541257999399999999859969999379965799999986988899997089984986889999999
Q 001525 554 LEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLE 633 (1060)
Q Consensus 554 ie~~l~llG~i~i~D~lr~~v~~~I~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (1060)
...+-.+.|.+.+.|+++|++.++++.|++.|++++|+|||+..++..++..+|+..
T Consensus 121 ~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~----------------------- 177 (263)
T 2yj3_A 121 VYINGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE----------------------- 177 (263)
Q ss_pred HHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCEEEEECCCCCCH
Q ss_conf 99976101479998569999372489999999999885520135128998092309999999883699299993896677
Q 001525 634 RVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDV 713 (1060)
Q Consensus 634 ~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sp~qK~~iV~~lk~~~~~vl~iGDG~NDv 713 (1060)
++..+.|..|..+++.++..+..++|+|||.||+
T Consensus 178 ----------------------------------------------~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~ 211 (263)
T 2yj3_A 178 ----------------------------------------------YYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDA 211 (263)
Q ss_pred HHHHHCCCEEEECCCCHHHHHHHCCEEE--CCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 8776179007744872688974425640--3521025788761124468888
Q 001525 714 RMIQKADIGVGISGREGLQAARAADYSI--GKFRFLKRLILVHGRYSYNRTA 763 (1060)
Q Consensus 714 ~ml~~AdvGI~i~g~~~~~a~~~aD~vi--~~~~~l~~lll~~Gr~~~~r~~ 763 (1060)
+|++.|++||++ |+....+...+|+++ .++..+..+ +..+|..++++.
T Consensus 212 ~aa~~Agv~va~-g~~~~~~~~~ad~v~~~~~l~~l~~~-l~~~r~~~~~i~ 261 (263)
T 2yj3_A 212 AALALADVSVAM-GNGVDISKNVADIILVSNDIGTLLGL-IKNRKRLSNAIP 261 (263)
No 10
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=1.00 E-value=1 Score=174.29 Aligned_cols=271 Identities=21% Similarity=0.251 Sum_probs=191.8
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 99875445853311235705999417752244725898999969761698777778533465420599019999999862
Q 001525 313 TDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAV 392 (1060)
Q Consensus 313 ~~~~~~~k~~~~~e~LG~v~~I~~DKTGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l 392 (1060)
.+.++++|+++++|++++++.|+||||||||.+.+.+.++...+. . ..+++..
T Consensus 14 ~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~----------~--------------~~~~l~~--- 66 (287)
T 3a1c_A 14 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG----------D--------------ERELLRL--- 66 (287)
T ss_dssp CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS----------C--------------HHHHHHH---
T ss_pred HHCCEEEECCHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEECCC----------C--------------HHHHHHH---
T ss_conf 879979968089988536999999689988289779999981799----------9--------------9999999---
Q ss_pred CCEEECCCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEEECCCEEEEEECCEEEEEEEEEEECCCCCCEEEEEEEEECCC
Q ss_conf 04000355889836884069419999999983690997336967999978907899998986077998038999995899
Q 001525 393 CNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHS 472 (1060)
Q Consensus 393 C~~~~~~~~~~~~~~~~~~~p~e~aLv~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~ 472 (1060)
|..+. ..+.+|.+.|+.++++..|+..... ..+. ...|.. + +.
T Consensus 67 ~~~~e----------~~s~hp~~~a~~~~~~~~g~~~~~~--~~~~-~~~G~~-----------------~----~~--- 109 (287)
T 3a1c_A 67 AAIAE----------RRSEHPIAEAIVKKALEHGIELGEP--EKVE-VIAGEG-----------------V----VA--- 109 (287)
T ss_dssp HHHHT----------TTCCSHHHHHHHHHHHHTTCCCCCC--SCEE-EETTTE-----------------E----EE---
T ss_pred HHHHH----------HCCCCHHHHHHHHHHHHCCCCCCCC--CCCE-EECCCC-----------------E----EE---
T ss_conf 99975----------2179979999999998659985555--4414-624887-----------------2----88---
Q ss_pred CCEEEEECCHHHHCCCHHCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 93899925713310200005983679999999998625527899998349889999999999972000028999999999
Q 001525 473 GNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQ 552 (1060)
Q Consensus 473 ~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~ 552 (1060)
. .+.+|.++.+..... ..+..+.+..+.+..+|.+++++++
T Consensus 110 ~---~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~i~~~~---------------------------------- 150 (287)
T 3a1c_A 110 D---GILVGNKRLMEDFGV--AVSNEVELALEKLEREAKTAVIVAR---------------------------------- 150 (287)
T ss_dssp T---TEEEECHHHHHHTTC--CCCHHHHHHHHHHHHTTCEEEEEEE----------------------------------
T ss_pred E---EEEECCHHHHHHCCC--CCCHHHHHHHHHHHHCCCEEEEEEE----------------------------------
T ss_conf 9---999889999986599--7507789999998747975999999----------------------------------
Q ss_pred HHCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHH
Q ss_conf 71038189899854125799939999999985996999937996579999998698889999708998498688999999
Q 001525 553 RLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSL 632 (1060)
Q Consensus 553 ~ie~~l~llG~i~i~D~lr~~v~~~I~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 632 (1060)
|..+.+.+..+++++|++.++++.|+++|+++.++||+....+..+...+|+.
T Consensus 151 ----d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~----------------------- 203 (287)
T 3a1c_A 151 ----NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------------- 203 (287)
T ss_dssp ----TTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------
T ss_pred ----CCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCC-----------------------
T ss_conf ----99899999954536141899999999779859999098989999999980981-----------------------
Q ss_pred HHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCEEEEECCCCCC
Q ss_conf 99997610147999856999937248999999999988552013512899809230999999988369929999389667
Q 001525 633 ERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGND 712 (1060)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sp~qK~~iV~~lk~~~~~vl~iGDG~ND 712 (1060)
..+..+.|..|...++.++.. ..+++|||+.||
T Consensus 204 ----------------------------------------------~~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~D 236 (287)
T 3a1c_A 204 ----------------------------------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGIND 236 (287)
T ss_dssp ----------------------------------------------EEECSCCTTCHHHHHHHHTTT-CCEEEEECTTTC
T ss_pred ----------------------------------------------EEEEECCHHHHHHHHHHHHCC-CEEEEEECCHHH
T ss_conf ----------------------------------------------311005817799999998258-839999797778
Q ss_pred HHHHHHCCCEEEECCCCHHHHHHHCCEEE--CCCCHHHHHHHHHHHHHHHHH
Q ss_conf 78776179007744872688974425640--352102578876112446888
Q 001525 713 VRMIQKADIGVGISGREGLQAARAADYSI--GKFRFLKRLILVHGRYSYNRT 762 (1060)
Q Consensus 713 v~ml~~AdvGI~i~g~~~~~a~~~aD~vi--~~~~~l~~lll~~Gr~~~~r~ 762 (1060)
++|.+.|+++|++ ++........+|+++ .++..+.. ++..+|..++++
T Consensus 237 i~~a~~ag~~v~~-~~~~~~~~~~ad~v~~~~~~~~l~~-~l~~~~~~~~~i 286 (287)
T 3a1c_A 237 APALAQADLGIAV-GSGSDVAVESGDIVLIRDDLRDVVA-AIQLSRKTMSKI 286 (287)
T ss_dssp HHHHHHSSEEEEE-CCCSCCSSCCSSEEESSSCTHHHHH-HHHTTC------
T ss_pred HHHHHHCCEEEEE-CCCCHHHHHHCCEEEECCCHHHHHH-HHHHHHHHHHHH
T ss_conf 9999978952996-7887788962999994799899999-999999999850
Done!