BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001527
(1060 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 154/514 (29%), Positives = 232/514 (45%), Gaps = 52/514 (10%)
Query: 92 NLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNLSLAG 151
+ S L L +S N +SG I L+ L++S N F +P L+SLQ LSLA
Sbjct: 218 DCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAE 275
Query: 152 NNFSGLIPDSVSGLV-SIQSLDLSHNSFSGSLPPALTRXXXXXXXXXXXXGFSKRIPRGF 210
N F+G IPD +SG ++ LDLS N F G++PP FS +P
Sbjct: 276 NKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDT 335
Query: 211 ELIL-GLQVLDFHGNKLDGHLDGEFFLLTNASH----IDFSGNMFVGSSSQKFLPGLSQ- 264
L + GL+VLD N+ G L LTN S +D S N F G LP L Q
Sbjct: 336 LLKMRGLKVLDLSFNEFSGELPES---LTNLSASLLTLDLSSNNFSG----PILPNLCQN 388
Query: 265 ---SVQYLNLSLNQLTGSLVNGGELQLFENLKVLDLSYNQLTGELPG-FNFVYELQVLKL 320
++Q L L N TG + L L L LS+N L+G +P + +L+ LKL
Sbjct: 389 PKNTLQELYLQNNGFTGKIP--PTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKL 446
Query: 321 SNNRFSGFIPXXXXXXXXXXXXXXXXXXXXXXGSVSMILSTNLHMLNLSSNGLTGELPLL 380
N G IP + TNL+ ++LS+N LTGE+P
Sbjct: 447 WLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKW 506
Query: 381 TG---SCAVLDLSNNQFEGNL-SRILKWGNIEYLDLSRNHLTGSIPEE--------TPQF 428
G + A+L LSNN F GN+ + + ++ +LDL+ N G+IP F
Sbjct: 507 IGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANF 566
Query: 429 L---RXXXXXXXXXXXXXXXPKVIIQYQKLRVLDLSFNHLDGPFLTNLL----------- 474
+ R ++++Q +R L N L N+
Sbjct: 567 IAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQL--NRLSTRNPCNITSRVYGGHTSPT 624
Query: 475 --NSSTLQELHLADNLLTGVLDFSPPSVSNLQVLDLSHNRLNGYFPDRLGSLTGLKVLCL 532
N+ ++ L ++ N+L+G + S+ L +L+L HN ++G PD +G L GL +L L
Sbjct: 625 FDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDL 684
Query: 533 AGNNISGSLPTSMANMTSLSSLVISQNHFTGPLP 566
+ N + G +P +M+ +T L+ + +S N+ +GP+P
Sbjct: 685 SSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 166/561 (29%), Positives = 240/561 (42%), Gaps = 96/561 (17%)
Query: 58 PSSWNGIVCNGGNVAGVVLD----NLGLSAA---------------------ADLSVFSN 92
P +++G+ C V + L N+G SA +S F
Sbjct: 36 PCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKC 95
Query: 93 LSMLVKLSMSNNSISGVIPD--NIGDFKSLEFLDVSDNL--FSSSLPSGIGKLESLQNLS 148
+ L L +S NS+SG + ++G L+FL+VS N F + G+ KL SL+ L
Sbjct: 96 SASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL-KLNSLEVLD 154
Query: 149 LAGNNFSGLIPDSVSGLV------SIQSLDLSHNSFSGSLPPALTRXXXXXXXXXXXXGF 202
L+ N+ SG +V G V ++ L +S N SG + ++R F
Sbjct: 155 LSANSISGA---NVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNF 209
Query: 203 SKRIPRGFELILG----LQVLDFHGNKLDGHLDGEFFLLTNASHIDFSGNMFVGSSSQKF 258
S IP LG LQ LD GNKL G T ++ S N FVG
Sbjct: 210 STGIP-----FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGP----- 259
Query: 259 LPGLS-QSVQYLNLSLNQLTGSL---VNGGELQLFENLKVLDLSYNQLTGELPGF-NFVY 313
+P L +S+QYL+L+ N+ TG + ++G + L LDLS N G +P F
Sbjct: 260 IPPLPLKSLQYLSLAENKFTGEIPDFLSGA----CDTLTGLDLSGNHFYGAVPPFFGSCS 315
Query: 314 ELQVLKLSNNRFSGFIPXXXXXXXXXXXXXXXXXXXXXXGSVSMILSTNLHMLNLSSNGL 373
L+ L LS+N FSG +P +++ L +L+LS N
Sbjct: 316 LLESLALSSNNFSGELPMD-----------------------TLLKMRGLKVLDLSFNEF 352
Query: 374 TGELPL----LTGSCAVLDLSNNQFEG----NLSRILKWGNIEYLDLSRNHLTGSIPEET 425
+GELP L+ S LDLS+N F G NL + K ++ L L N TG IP
Sbjct: 353 SGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK-NTLQELYLQNNGFTGKIPPTL 411
Query: 426 PQFLRXXXXXXXXXXXXXXXPKVIIQYQKLRVLDLSFNHLDGPFLTNLLNSSTLQELHLA 485
P + KLR L L N L+G L+ TL+ L L
Sbjct: 412 SNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 471
Query: 486 DNLLTGVLDFSPPSVSNLQVLDLSHNRLNGYFPDRLGSLTGLKVLCLAGNNISGSLPTSM 545
N LTG + + +NL + LS+NRL G P +G L L +L L+ N+ SG++P +
Sbjct: 472 FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 531
Query: 546 ANMTSLSSLVISQNHFTGPLP 566
+ SL L ++ N F G +P
Sbjct: 532 GDCRSLIWLDLNTNLFNGTIP 552
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 133/330 (40%), Gaps = 46/330 (13%)
Query: 89 VFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNLS 148
SN S LV L +S N +SG IP ++G L L + N+ +P + +++L+ L
Sbjct: 410 TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLI 469
Query: 149 LAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXXXXXXGFSKRIPR 208
L N+ +G IP +S ++ + LS+N +G +P + R FS IP
Sbjct: 470 LDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPA 529
Query: 209 GFELILGLQVLDFHGNKLDGHLDGEFFLLTNASHIDF-SGNMFV---GSSSQKFLPGLSQ 264
L LD + N +G + F + +F +G +V +K G
Sbjct: 530 ELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGN 589
Query: 265 SVQYLNLSLNQL-----------TGSLVNGGELQLFEN---LKVLDLSYNQLTGELPG-F 309
+++ + QL T + G F+N + LD+SYN L+G +P
Sbjct: 590 LLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEI 649
Query: 310 NFVYELQVLKLSNNRFSGFIPXXXXXXXXXXXXXXXXXXXXXXGSVSMILSTNLHMLNLS 369
+ L +L L +N SG IP L++L+LS
Sbjct: 650 GSMPYLFILNLGHNDISGSIPDEVGDL------------------------RGLNILDLS 685
Query: 370 SNGLTGELPLLTGSCAVL---DLSNNQFEG 396
SN L G +P + +L DLSNN G
Sbjct: 686 SNKLDGRIPQAMSALTMLTEIDLSNNNLSG 715
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 141/314 (44%), Gaps = 41/314 (13%)
Query: 297 LSYNQLTGELPGFNFVYELQVLKLSNNRFSGFIPXXXXXXXXXXXXXXXXXXXXXX--GS 354
LS + + G + GF L L LS N SG + G
Sbjct: 81 LSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGK 140
Query: 355 VSMILSTN-LHMLNLSSNGLTGELPL---LTGSCAVLD---LSNNQFEGNLSRILKWGNI 407
VS L N L +L+LS+N ++G + L+ C L +S N+ G++ + + N+
Sbjct: 141 VSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD-VSRCVNL 199
Query: 408 EYLDLSRNHLTGSIPEETPQFLRXXXXXXXXXXXXXXXPKVIIQYQKLRVLDLSFNHLDG 467
E+LD+S N+ + IP + L+ LD+S N L G
Sbjct: 200 EFLDVSSNNFSTGIP-------------------------FLGDCSALQHLDISGNKLSG 234
Query: 468 PFLTNLLNSSTLQELHLADNLLTGVLDFSPPSVSNLQVLDLSHNRLNGYFPDRL-GSLTG 526
F + + L+ L+++ N G + P + +LQ L L+ N+ G PD L G+
Sbjct: 235 DFSRAISTCTELKLLNISSNQFVGPI--PPLPLKSLQYLSLAENKFTGEIPDFLSGACDT 292
Query: 527 LKVLCLAGNNISGSLPTSMANMTSLSSLVISQNHFTGPLPNNL---PNSLETFNVSYNDF 583
L L L+GN+ G++P + + L SL +S N+F+G LP + L+ ++S+N+F
Sbjct: 293 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 352
Query: 584 SGAVPENLRKFPSS 597
SG +PE+L +S
Sbjct: 353 SGELPESLTNLSAS 366
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 175/434 (40%), Gaps = 57/434 (13%)
Query: 104 NSISGVIP-DNIGDFKSLEFLDVSDNLFSSSLPSGIGKLE-SLQNLSLAGNNFSG-LIPD 160
N+ SG +P D + + L+ LD+S N FS LP + L SL L L+ NNFSG ++P+
Sbjct: 325 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 384
Query: 161 SVSGLV-SIQSLDLSHNSFSGSLPPALTRXXXXXXXXXXXXGFSKRIPRGFELILGLQVL 219
++Q L L +N F+G +PP L+ S IP + L+ L
Sbjct: 385 LCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDL 444
Query: 220 DFHGNKLDGHLDGEFFLLTNASHIDFSGNMFVGSSSQKFLPGLSQ--SVQYLNLSLNQLT 277
N L+G + E + + N G + GLS ++ +++LS N+LT
Sbjct: 445 KLWLNMLEGEIPQELMYVKTLETLILDFNDLTG----EIPSGLSNCTNLNWISLSNNRLT 500
Query: 278 GSLVNGGELQLFENLKVLDLSYNQLTGELPG-FNFVYELQVLKLSNNRF----------- 325
G + + ENL +L LS N +G +P L L L+ N F
Sbjct: 501 GEIPKW--IGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQ 558
Query: 326 SGFIPXXXXXXXXXXXXXXXXXXXXXXGSVSMILSTNLHMLNLSSNGLTGELPLLTGSCA 385
SG I G+ +++ + L N L+ P S
Sbjct: 559 SGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQL--NRLSTRNPCNITSRV 616
Query: 386 VLDLSNNQFEGNLSRILKWGNIEYLDLSRNHLTGSIPEETPQFLRXXXXXXXXXXXXXXX 445
++ F+ N G++ +LD+S N L+G IP+E
Sbjct: 617 YGGHTSPTFDNN-------GSMMFLDMSYNMLSGYIPKE--------------------- 648
Query: 446 PKVIIQYQKLRVLDLSFNHLDGPFLTNLLNSSTLQELHLADNLLTGVLDFSPPSVSNLQV 505
I L +L+L N + G + + L L L+ N L G + + +++ L
Sbjct: 649 ---IGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTE 705
Query: 506 LDLSHNRLNGYFPD 519
+DLS+N L+G P+
Sbjct: 706 IDLSNNNLSGPIPE 719
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 51/95 (53%)
Query: 89 VFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNLS 148
F N ++ L MS N +SG IP IG L L++ N S S+P +G L L L
Sbjct: 624 TFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILD 683
Query: 149 LAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLP 183
L+ N G IP ++S L + +DLS+N+ SG +P
Sbjct: 684 LSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 96 LVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNLSLAGNNFS 155
L L++ +N ISG IPD +GD + L LD+S N +P + L L + L+ NN S
Sbjct: 655 LFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLS 714
Query: 156 GLIPD 160
G IP+
Sbjct: 715 GPIPE 719
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 104/249 (41%), Gaps = 40/249 (16%)
Query: 88 SVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNL 147
S SN + L +S+SNN ++G IP IG ++L L +S+N FS ++P+ +G SL L
Sbjct: 481 SGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWL 540
Query: 148 SLAGNNFSGLIPDSV---SGLVSIQSL--------------DLSHNS-----FSGSLPPA 185
L N F+G IP ++ SG ++ + H + F G
Sbjct: 541 DLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQ 600
Query: 186 LTRXXXXXXXXXXXXGFSKRIPRGFELILGLQVLDFHGNKLDGHLDGE-----FFLLTNA 240
L R + F+ + LD N L G++ E + + N
Sbjct: 601 LNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNL 660
Query: 241 SHIDFSGNM--FVGSSSQKFLPGLSQSVQYLNLSLNQLTGSLVNGGELQLFENLKVLDLS 298
H D SG++ VG L GL L+LS N+L G + + L +DLS
Sbjct: 661 GHNDISGSIPDEVGD-----LRGL----NILDLSSNKLDGRIPQA--MSALTMLTEIDLS 709
Query: 299 YNQLTGELP 307
N L+G +P
Sbjct: 710 NNNLSGPIP 718
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 154/514 (29%), Positives = 232/514 (45%), Gaps = 52/514 (10%)
Query: 92 NLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNLSLAG 151
+ S L L +S N +SG I L+ L++S N F +P L+SLQ LSLA
Sbjct: 221 DCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAE 278
Query: 152 NNFSGLIPDSVSGLV-SIQSLDLSHNSFSGSLPPALTRXXXXXXXXXXXXGFSKRIPRGF 210
N F+G IPD +SG ++ LDLS N F G++PP FS +P
Sbjct: 279 NKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDT 338
Query: 211 ELIL-GLQVLDFHGNKLDGHLDGEFFLLTNASH----IDFSGNMFVGSSSQKFLPGLSQ- 264
L + GL+VLD N+ G L LTN S +D S N F G LP L Q
Sbjct: 339 LLKMRGLKVLDLSFNEFSGELPES---LTNLSASLLTLDLSSNNFSG----PILPNLCQN 391
Query: 265 ---SVQYLNLSLNQLTGSLVNGGELQLFENLKVLDLSYNQLTGELPG-FNFVYELQVLKL 320
++Q L L N TG + L L L LS+N L+G +P + +L+ LKL
Sbjct: 392 PKNTLQELYLQNNGFTGKIP--PTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKL 449
Query: 321 SNNRFSGFIPXXXXXXXXXXXXXXXXXXXXXXGSVSMILSTNLHMLNLSSNGLTGELPLL 380
N G IP + TNL+ ++LS+N LTGE+P
Sbjct: 450 WLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKW 509
Query: 381 TG---SCAVLDLSNNQFEGNL-SRILKWGNIEYLDLSRNHLTGSIPEE--------TPQF 428
G + A+L LSNN F GN+ + + ++ +LDL+ N G+IP F
Sbjct: 510 IGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANF 569
Query: 429 L---RXXXXXXXXXXXXXXXPKVIIQYQKLRVLDLSFNHLDGPFLTNLL----------- 474
+ R ++++Q +R L N L N+
Sbjct: 570 IAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQL--NRLSTRNPCNITSRVYGGHTSPT 627
Query: 475 --NSSTLQELHLADNLLTGVLDFSPPSVSNLQVLDLSHNRLNGYFPDRLGSLTGLKVLCL 532
N+ ++ L ++ N+L+G + S+ L +L+L HN ++G PD +G L GL +L L
Sbjct: 628 FDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDL 687
Query: 533 AGNNISGSLPTSMANMTSLSSLVISQNHFTGPLP 566
+ N + G +P +M+ +T L+ + +S N+ +GP+P
Sbjct: 688 SSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 166/561 (29%), Positives = 240/561 (42%), Gaps = 96/561 (17%)
Query: 58 PSSWNGIVCNGGNVAGVVLD----NLGLSAA---------------------ADLSVFSN 92
P +++G+ C V + L N+G SA +S F
Sbjct: 39 PCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKC 98
Query: 93 LSMLVKLSMSNNSISGVIPD--NIGDFKSLEFLDVSDNL--FSSSLPSGIGKLESLQNLS 148
+ L L +S NS+SG + ++G L+FL+VS N F + G+ KL SL+ L
Sbjct: 99 SASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL-KLNSLEVLD 157
Query: 149 LAGNNFSGLIPDSVSGLV------SIQSLDLSHNSFSGSLPPALTRXXXXXXXXXXXXGF 202
L+ N+ SG +V G V ++ L +S N SG + ++R F
Sbjct: 158 LSANSISGA---NVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNF 212
Query: 203 SKRIPRGFELILG----LQVLDFHGNKLDGHLDGEFFLLTNASHIDFSGNMFVGSSSQKF 258
S IP LG LQ LD GNKL G T ++ S N FVG
Sbjct: 213 STGIP-----FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGP----- 262
Query: 259 LPGLS-QSVQYLNLSLNQLTGSL---VNGGELQLFENLKVLDLSYNQLTGELPGF-NFVY 313
+P L +S+QYL+L+ N+ TG + ++G + L LDLS N G +P F
Sbjct: 263 IPPLPLKSLQYLSLAENKFTGEIPDFLSGA----CDTLTGLDLSGNHFYGAVPPFFGSCS 318
Query: 314 ELQVLKLSNNRFSGFIPXXXXXXXXXXXXXXXXXXXXXXGSVSMILSTNLHMLNLSSNGL 373
L+ L LS+N FSG +P +++ L +L+LS N
Sbjct: 319 LLESLALSSNNFSGELPMD-----------------------TLLKMRGLKVLDLSFNEF 355
Query: 374 TGELPL----LTGSCAVLDLSNNQFEG----NLSRILKWGNIEYLDLSRNHLTGSIPEET 425
+GELP L+ S LDLS+N F G NL + K ++ L L N TG IP
Sbjct: 356 SGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK-NTLQELYLQNNGFTGKIPPTL 414
Query: 426 PQFLRXXXXXXXXXXXXXXXPKVIIQYQKLRVLDLSFNHLDGPFLTNLLNSSTLQELHLA 485
P + KLR L L N L+G L+ TL+ L L
Sbjct: 415 SNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 474
Query: 486 DNLLTGVLDFSPPSVSNLQVLDLSHNRLNGYFPDRLGSLTGLKVLCLAGNNISGSLPTSM 545
N LTG + + +NL + LS+NRL G P +G L L +L L+ N+ SG++P +
Sbjct: 475 FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 534
Query: 546 ANMTSLSSLVISQNHFTGPLP 566
+ SL L ++ N F G +P
Sbjct: 535 GDCRSLIWLDLNTNLFNGTIP 555
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 133/330 (40%), Gaps = 46/330 (13%)
Query: 89 VFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNLS 148
SN S LV L +S N +SG IP ++G L L + N+ +P + +++L+ L
Sbjct: 413 TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLI 472
Query: 149 LAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXXXXXXGFSKRIPR 208
L N+ +G IP +S ++ + LS+N +G +P + R FS IP
Sbjct: 473 LDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPA 532
Query: 209 GFELILGLQVLDFHGNKLDGHLDGEFFLLTNASHIDF-SGNMFV---GSSSQKFLPGLSQ 264
L LD + N +G + F + +F +G +V +K G
Sbjct: 533 ELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGN 592
Query: 265 SVQYLNLSLNQL-----------TGSLVNGGELQLFEN---LKVLDLSYNQLTGELPG-F 309
+++ + QL T + G F+N + LD+SYN L+G +P
Sbjct: 593 LLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEI 652
Query: 310 NFVYELQVLKLSNNRFSGFIPXXXXXXXXXXXXXXXXXXXXXXGSVSMILSTNLHMLNLS 369
+ L +L L +N SG IP L++L+LS
Sbjct: 653 GSMPYLFILNLGHNDISGSIPDEVGDL------------------------RGLNILDLS 688
Query: 370 SNGLTGELPLLTGSCAVL---DLSNNQFEG 396
SN L G +P + +L DLSNN G
Sbjct: 689 SNKLDGRIPQAMSALTMLTEIDLSNNNLSG 718
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 141/314 (44%), Gaps = 41/314 (13%)
Query: 297 LSYNQLTGELPGFNFVYELQVLKLSNNRFSGFIPXXXXXXXXXXXXXXXXXXXXXX--GS 354
LS + + G + GF L L LS N SG + G
Sbjct: 84 LSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGK 143
Query: 355 VSMILSTN-LHMLNLSSNGLTGELPL---LTGSCAVLD---LSNNQFEGNLSRILKWGNI 407
VS L N L +L+LS+N ++G + L+ C L +S N+ G++ + + N+
Sbjct: 144 VSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD-VSRCVNL 202
Query: 408 EYLDLSRNHLTGSIPEETPQFLRXXXXXXXXXXXXXXXPKVIIQYQKLRVLDLSFNHLDG 467
E+LD+S N+ + IP + L+ LD+S N L G
Sbjct: 203 EFLDVSSNNFSTGIP-------------------------FLGDCSALQHLDISGNKLSG 237
Query: 468 PFLTNLLNSSTLQELHLADNLLTGVLDFSPPSVSNLQVLDLSHNRLNGYFPDRL-GSLTG 526
F + + L+ L+++ N G + P + +LQ L L+ N+ G PD L G+
Sbjct: 238 DFSRAISTCTELKLLNISSNQFVGPI--PPLPLKSLQYLSLAENKFTGEIPDFLSGACDT 295
Query: 527 LKVLCLAGNNISGSLPTSMANMTSLSSLVISQNHFTGPLPNNL---PNSLETFNVSYNDF 583
L L L+GN+ G++P + + L SL +S N+F+G LP + L+ ++S+N+F
Sbjct: 296 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 355
Query: 584 SGAVPENLRKFPSS 597
SG +PE+L +S
Sbjct: 356 SGELPESLTNLSAS 369
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 175/434 (40%), Gaps = 57/434 (13%)
Query: 104 NSISGVIP-DNIGDFKSLEFLDVSDNLFSSSLPSGIGKLE-SLQNLSLAGNNFSG-LIPD 160
N+ SG +P D + + L+ LD+S N FS LP + L SL L L+ NNFSG ++P+
Sbjct: 328 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 387
Query: 161 SVSGLV-SIQSLDLSHNSFSGSLPPALTRXXXXXXXXXXXXGFSKRIPRGFELILGLQVL 219
++Q L L +N F+G +PP L+ S IP + L+ L
Sbjct: 388 LCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDL 447
Query: 220 DFHGNKLDGHLDGEFFLLTNASHIDFSGNMFVGSSSQKFLPGLSQ--SVQYLNLSLNQLT 277
N L+G + E + + N G + GLS ++ +++LS N+LT
Sbjct: 448 KLWLNMLEGEIPQELMYVKTLETLILDFNDLTG----EIPSGLSNCTNLNWISLSNNRLT 503
Query: 278 GSLVNGGELQLFENLKVLDLSYNQLTGELPG-FNFVYELQVLKLSNNRF----------- 325
G + + ENL +L LS N +G +P L L L+ N F
Sbjct: 504 GEIPKW--IGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQ 561
Query: 326 SGFIPXXXXXXXXXXXXXXXXXXXXXXGSVSMILSTNLHMLNLSSNGLTGELPLLTGSCA 385
SG I G+ +++ + L N L+ P S
Sbjct: 562 SGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQL--NRLSTRNPCNITSRV 619
Query: 386 VLDLSNNQFEGNLSRILKWGNIEYLDLSRNHLTGSIPEETPQFLRXXXXXXXXXXXXXXX 445
++ F+ N G++ +LD+S N L+G IP+E
Sbjct: 620 YGGHTSPTFDNN-------GSMMFLDMSYNMLSGYIPKE--------------------- 651
Query: 446 PKVIIQYQKLRVLDLSFNHLDGPFLTNLLNSSTLQELHLADNLLTGVLDFSPPSVSNLQV 505
I L +L+L N + G + + L L L+ N L G + + +++ L
Sbjct: 652 ---IGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTE 708
Query: 506 LDLSHNRLNGYFPD 519
+DLS+N L+G P+
Sbjct: 709 IDLSNNNLSGPIPE 722
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 51/95 (53%)
Query: 89 VFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNLS 148
F N ++ L MS N +SG IP IG L L++ N S S+P +G L L L
Sbjct: 627 TFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILD 686
Query: 149 LAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLP 183
L+ N G IP ++S L + +DLS+N+ SG +P
Sbjct: 687 LSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 96 LVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNLSLAGNNFS 155
L L++ +N ISG IPD +GD + L LD+S N +P + L L + L+ NN S
Sbjct: 658 LFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLS 717
Query: 156 GLIPD 160
G IP+
Sbjct: 718 GPIPE 722
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 104/249 (41%), Gaps = 40/249 (16%)
Query: 88 SVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNL 147
S SN + L +S+SNN ++G IP IG ++L L +S+N FS ++P+ +G SL L
Sbjct: 484 SGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWL 543
Query: 148 SLAGNNFSGLIPDSV---SGLVSIQSL--------------DLSHNS-----FSGSLPPA 185
L N F+G IP ++ SG ++ + H + F G
Sbjct: 544 DLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQ 603
Query: 186 LTRXXXXXXXXXXXXGFSKRIPRGFELILGLQVLDFHGNKLDGHLDGE-----FFLLTNA 240
L R + F+ + LD N L G++ E + + N
Sbjct: 604 LNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNL 663
Query: 241 SHIDFSGNM--FVGSSSQKFLPGLSQSVQYLNLSLNQLTGSLVNGGELQLFENLKVLDLS 298
H D SG++ VG L GL L+LS N+L G + + L +DLS
Sbjct: 664 GHNDISGSIPDEVGD-----LRGL----NILDLSSNKLDGRIPQA--MSALTMLTEIDLS 712
Query: 299 YNQLTGELP 307
N L+G +P
Sbjct: 713 NNNLSGPIP 721
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 122 bits (306), Expect = 1e-27, Method: Composition-based stats.
Identities = 91/276 (32%), Positives = 147/276 (53%), Gaps = 15/276 (5%)
Query: 783 VLGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIR-HPNVVGLRGYY 841
+LGR G Y+ L +G + VK L+E + ++ H N++ LRG+
Sbjct: 45 ILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFC 104
Query: 842 WGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYL--HFDR 899
PT E+L++ Y++ GS+AS L +RP + PPL W +R +IA+ ARGL YL H D
Sbjct: 105 MTPT--ERLLVYPYMANGSVASCLRERPESQ-PPLDWPKRQRIALGSARGLAYLHDHCDP 161
Query: 900 AVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKP 959
+ H ++KA NILLD + A V D+ L +LM G +G+ APE ++ K
Sbjct: 162 KIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGK- 219
Query: 960 HPSFKSDVYAFGVILLELLTGRCAGDVIS-GEGAGVDLTDWMQLKVAEGHGSDCFDAAVM 1018
S K+DV+ +GV+LLEL+TG+ A D+ V L DW++ + E +A V
Sbjct: 220 -SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK----LEALVD 274
Query: 1019 PEMVNPAAEKGMKEVLGIALRCIRSVS-ERPGIKTI 1053
++ ++ +++++ +AL C +S ERP + +
Sbjct: 275 VDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 310
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant
Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 122 bits (306), Expect = 1e-27, Method: Composition-based stats.
Identities = 91/276 (32%), Positives = 147/276 (53%), Gaps = 15/276 (5%)
Query: 783 VLGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIR-HPNVVGLRGYY 841
+LGR G Y+ L +G + VK L+E + ++ H N++ LRG+
Sbjct: 37 ILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96
Query: 842 WGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYL--HFDR 899
PT E+L++ Y++ GS+AS L +RP + PPL W +R +IA+ ARGL YL H D
Sbjct: 97 MTPT--ERLLVYPYMANGSVASCLRERPESQ-PPLDWPKRQRIALGSARGLAYLHDHCDP 153
Query: 900 AVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKP 959
+ H ++KA NILLD + A V D+ L +LM G +G+ APE ++ K
Sbjct: 154 KIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGK- 211
Query: 960 HPSFKSDVYAFGVILLELLTGRCAGDVIS-GEGAGVDLTDWMQLKVAEGHGSDCFDAAVM 1018
S K+DV+ +GV+LLEL+TG+ A D+ V L DW++ + E +A V
Sbjct: 212 -SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK----LEALVD 266
Query: 1019 PEMVNPAAEKGMKEVLGIALRCIRSVS-ERPGIKTI 1053
++ ++ +++++ +AL C +S ERP + +
Sbjct: 267 VDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 302
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 132/272 (48%), Gaps = 18/272 (6%)
Query: 783 VLGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYW 842
++G G Y+ L +G + +K ++ RHP++V L G+
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGF-- 103
Query: 843 GPTQHEKLILSDYISPGSLASFLY--DRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRA 900
++E +++ Y+ G+L LY D P ++W QRL+I + ARGL+YLH RA
Sbjct: 104 CDERNEMILIYKYMENGNLKRHLYGSDLPTM---SMSWEQRLEICIGAARGLHYLH-TRA 159
Query: 901 VPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIE-QILDAGVLGYRAPELAASKKP 959
+ H ++K+ NILLD + ++ D+ + + T+ G + G LGY PE K
Sbjct: 160 IIHRDVKSINILLD-ENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFI--KG 216
Query: 960 HPSFKSDVYAFGVILLELLTGRCAGDVISGEGAGVDLTDWMQLKVAEGHGSDCFDAAVMP 1019
+ KSDVY+FGV+L E+L R A V S V+L +W E H + + V P
Sbjct: 217 RLTEKSDVYSFGVVLFEVLCARSA-IVQSLPREMVNLAEW----AVESHNNGQLEQIVDP 271
Query: 1020 EMVNPAAEKGMKEVLGIALRCIRSVSE-RPGI 1050
+ + + +++ A++C+ SE RP +
Sbjct: 272 NLADKIRPESLRKFGDTAVKCLALSSEDRPSM 303
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 131/272 (48%), Gaps = 18/272 (6%)
Query: 783 VLGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYW 842
++G G Y+ L +G + +K ++ RHP++V L G+
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGF-- 103
Query: 843 GPTQHEKLILSDYISPGSLASFLY--DRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRA 900
++E +++ Y+ G+L LY D P ++W QRL+I + ARGL+YLH RA
Sbjct: 104 CDERNEMILIYKYMENGNLKRHLYGSDLPTM---SMSWEQRLEICIGAARGLHYLH-TRA 159
Query: 901 VPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIE-QILDAGVLGYRAPELAASKKP 959
+ H ++K+ NILLD + ++ D+ + + T+ + G LGY PE K
Sbjct: 160 IIHRDVKSINILLD-ENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFI--KG 216
Query: 960 HPSFKSDVYAFGVILLELLTGRCAGDVISGEGAGVDLTDWMQLKVAEGHGSDCFDAAVMP 1019
+ KSDVY+FGV+L E+L R A V S V+L +W E H + + V P
Sbjct: 217 RLTEKSDVYSFGVVLFEVLCARSA-IVQSLPREMVNLAEW----AVESHNNGQLEQIVDP 271
Query: 1020 EMVNPAAEKGMKEVLGIALRCIRSVSE-RPGI 1050
+ + + +++ A++C+ SE RP +
Sbjct: 272 NLADKIRPESLRKFGDTAVKCLALSSEDRPSM 303
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 139/311 (44%), Gaps = 34/311 (10%)
Query: 23 QDILALLEFKKGIKNDPTGFVLNSWNEESIDFDGCPSSWNGIVCNGGNVAGVVLDNLGLS 82
QD ALL+ KK + N T L+SW + D C +W G++C+ + ++NL LS
Sbjct: 6 QDKQALLQIKKDLGNPTT---LSSWLPTT---DCCNRTWLGVLCDT-DTQTYRVNNLDLS 58
Query: 83 AAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSD-NLFSSSLPSGIGKL 141
N IP ++ + L FL + N +P I KL
Sbjct: 59 GL------------------NLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKL 100
Query: 142 ESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXXXXXXG 201
L L + N SG IPD +S + ++ +LD S+N+ SG+LPP+++
Sbjct: 101 TQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR 160
Query: 202 FSKRIPRGFELILGL-QVLDFHGNKLDGHLDGEFFLLTNASHIDFSGNMFVGSSSQKFLP 260
S IP + L + N+L G + F L N + +D S NM G +S F
Sbjct: 161 ISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLF-- 217
Query: 261 GLSQSVQYLNLSLNQLTGSLVNGGELQLFENLKVLDLSYNQLTGELP-GFNFVYELQVLK 319
G ++ Q ++L+ N L L G++ L +NL LDL N++ G LP G + L L
Sbjct: 218 GSDKNTQKIHLAKNSLAFDL---GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLN 274
Query: 320 LSNNRFSGFIP 330
+S N G IP
Sbjct: 275 VSFNNLCGEIP 285
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 462 FNHLDGPFLTNLLNSSTLQELHLADNLLTGVLDFSPPSVSNLQVLDLSHNRLNGYFPDRL 521
N+L GP + + L L++ ++G + + L LD S+N L+G P +
Sbjct: 86 INNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSI 145
Query: 522 GSLTGLKVLCLAGNNISGSLPTSMANMTSL-SSLVISQNHFTGPLPNNLPNSLETFNVSY 580
SL L + GN ISG++P S + + L +S+ IS+N TG +P N N+++
Sbjct: 146 SSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFAN----LNLAF 201
Query: 581 NDFS 584
D S
Sbjct: 202 VDLS 205
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 76/187 (40%), Gaps = 7/187 (3%)
Query: 361 TNLHMLNLSSNGLTGELPLL---TGSCAVLDLSNNQFEGNLS-RILKWGNIEYLDLSRNH 416
T LH L ++ ++G +P + LD S N G L I N+ + N
Sbjct: 101 TQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR 160
Query: 417 LTGSIPEETPQFLRXXXXXXXXXXXXXXXPKVIIQYQKLRVLDLSFNHLDGPFLTNLLNS 476
++G+IP+ F + L +DLS N L+G +
Sbjct: 161 ISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSD 220
Query: 477 STLQELHLADNLLTGVLDFSPPSVS-NLQVLDLSHNRLNGYFPDRLGSLTGLKVLCLAGN 535
Q++HLA N L D +S NL LDL +NR+ G P L L L L ++ N
Sbjct: 221 KNTQKIHLAKNSL--AFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFN 278
Query: 536 NISGSLP 542
N+ G +P
Sbjct: 279 NLCGEIP 285
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 96/230 (41%), Gaps = 39/230 (16%)
Query: 405 GNIEYLDL----SRNHLTGSIPEETPQFLRXXXXXXXXXXXXXXXPKVIIQYQKLRVLDL 460
N+ YL+ N+L G IP + + P + Q + L LD
Sbjct: 73 ANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDF 132
Query: 461 SFNHLDG---PFLTNLLN----------------------SSTLQELHLADNLLTGVLDF 495
S+N L G P +++L N S + ++ N LTG +
Sbjct: 133 SYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKI-- 190
Query: 496 SPPSVSNLQV--LDLSHNRLNGYFPDRLGSLTGLKVLCLAGNNISGSLPTSMANMTSLSS 553
PP+ +NL + +DLS N L G GS + + LA N+++ L + +L+
Sbjct: 191 -PPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNG 248
Query: 554 LVISQNHFTGPLPNNLPN--SLETFNVSYNDFSGAVPE--NLRKFPSSSF 599
L + N G LP L L + NVS+N+ G +P+ NL++F S++
Sbjct: 249 LDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAY 298
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 108/205 (52%), Gaps = 20/205 (9%)
Query: 782 EVLGRSSHGTSYRATLENGMFLTVKWLREG--VAKQRXXXXXXXXXXXNIRHPNVVGLRG 839
E +G S GT +RA +G + VK L E A++ +RHPN+V G
Sbjct: 43 EKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 840 YYWGPTQHEKL-ILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFD 898
TQ L I+++Y+S GSL L+ R+ L +RL +A DVA+G+NYLH +
Sbjct: 102 ---AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ--LDERRRLSMAYDVAKGMNYLH-N 155
Query: 899 RAVP--HGNLKATNILLDGPDLNARVADYCLHRLMTQAGT-IEQILDAGVLGYRAPELAA 955
R P H NLK+ N+L+D +V D+ L RL +A T + AG + APE+
Sbjct: 156 RNPPIVHRNLKSPNLLVDK-KYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVL- 211
Query: 956 SKKPHPS-FKSDVYAFGVILLELLT 979
+ PS KSDVY+FGVIL EL T
Sbjct: 212 --RDEPSNEKSDVYSFGVILWELAT 234
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 106/204 (51%), Gaps = 18/204 (8%)
Query: 782 EVLGRSSHGTSYRATLENGMFLTVKWLREG--VAKQRXXXXXXXXXXXNIRHPNVVGLRG 839
E +G S GT +RA +G + VK L E A++ +RHPN+V G
Sbjct: 43 EKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 840 YYWGPTQHEKL-ILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFD 898
TQ L I+++Y+S GSL L+ R+ L +RL +A DVA+G+NYLH +
Sbjct: 102 ---AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ--LDERRRLSMAYDVAKGMNYLH-N 155
Query: 899 RAVP--HGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAAS 956
R P H +LK+ N+L+D +V D+ L RL + + AG + APE+
Sbjct: 156 RNPPIVHRDLKSPNLLVDK-KYTVKVCDFGLSRL-KASXFLXSKXAAGTPEWMAPEVL-- 211
Query: 957 KKPHPS-FKSDVYAFGVILLELLT 979
+ PS KSDVY+FGVIL EL T
Sbjct: 212 -RDEPSNEKSDVYSFGVILWELAT 234
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 84/158 (53%), Gaps = 12/158 (7%)
Query: 830 RHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVA 889
+H N+V L G+ + ++ Y+ GSL L G PPL+W R KIA A
Sbjct: 88 QHENLVELLGF--SSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPLSWHMRCKIAQGAA 143
Query: 890 RGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQ-AGTIEQILDAGVLGY 948
G+N+LH + + H ++K+ NILLD A+++D+ L R + A T+ G Y
Sbjct: 144 NGINFLHENHHI-HRDIKSANILLDEA-FTAKISDFGLARASEKFAQTVMXXRIVGTTAY 201
Query: 949 RAPE-LAASKKPHPSFKSDVYAFGVILLELLTGRCAGD 985
APE L P KSD+Y+FGV+LLE++TG A D
Sbjct: 202 MAPEALRGEITP----KSDIYSFGVVLLEIITGLPAVD 235
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 84/158 (53%), Gaps = 12/158 (7%)
Query: 830 RHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVA 889
+H N+V L G+ + ++ Y+ GSL L G PPL+W R KIA A
Sbjct: 88 QHENLVELLGF--SSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPLSWHMRCKIAQGAA 143
Query: 890 RGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQ-AGTIEQILDAGVLGY 948
G+N+LH + + H ++K+ NILLD A+++D+ L R + A T+ G Y
Sbjct: 144 NGINFLHENHHI-HRDIKSANILLDEA-FTAKISDFGLARASEKFAQTVMXSRIVGTTAY 201
Query: 949 RAPE-LAASKKPHPSFKSDVYAFGVILLELLTGRCAGD 985
APE L P KSD+Y+FGV+LLE++TG A D
Sbjct: 202 MAPEALRGEITP----KSDIYSFGVVLLEIITGLPAVD 235
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 83/158 (52%), Gaps = 12/158 (7%)
Query: 830 RHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVA 889
+H N+V L G+ + ++ Y+ GSL L G PPL+W R KIA A
Sbjct: 82 QHENLVELLGF--SSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPLSWHMRCKIAQGAA 137
Query: 890 RGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQ-AGTIEQILDAGVLGY 948
G+N+LH + + H ++K+ NILLD A+++D+ L R + A + G Y
Sbjct: 138 NGINFLHENHHI-HRDIKSANILLDEA-FTAKISDFGLARASEKFAQXVMXXRIVGTTAY 195
Query: 949 RAPE-LAASKKPHPSFKSDVYAFGVILLELLTGRCAGD 985
APE L P KSD+Y+FGV+LLE++TG A D
Sbjct: 196 MAPEALRGEITP----KSDIYSFGVVLLEIITGLPAVD 229
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 83/159 (52%), Gaps = 14/159 (8%)
Query: 830 RHPNVVGLRGYYWGPTQHEKLILSDYISP-GSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
+H N+V L G+ + + L L P GSL L G PPL+W R KIA
Sbjct: 79 QHENLVELLGF---SSDGDDLCLVYVYXPNGSLLDRLSCLDGT--PPLSWHXRCKIAQGA 133
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQ-AGTIEQILDAGVLG 947
A G+N+LH + + H ++K+ NILLD A+++D+ L R + A + G
Sbjct: 134 ANGINFLHENHHI-HRDIKSANILLDEA-FTAKISDFGLARASEKFAQXVXXSRIVGTTA 191
Query: 948 YRAPE-LAASKKPHPSFKSDVYAFGVILLELLTGRCAGD 985
Y APE L P KSD+Y+FGV+LLE++TG A D
Sbjct: 192 YXAPEALRGEITP----KSDIYSFGVVLLEIITGLPAVD 226
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 111/235 (47%), Gaps = 30/235 (12%)
Query: 830 RHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVA 889
RH N++ GY T+ + I++ + SL L+ + + + IA A
Sbjct: 66 RHVNILLFMGY---STKPQLAIVTQWCEGSSLYHHLHASETK----FEMKKLIDIARQTA 118
Query: 890 RGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQ---AGTIEQILDAGVL 946
RG++YLH +++ H +LK+ NI L D ++ D+ L + ++ + EQ+ +G +
Sbjct: 119 RGMDYLH-AKSIIHRDLKSNNIFLH-EDNTVKIGDFGLATVKSRWSGSHQFEQL--SGSI 174
Query: 947 GYRAPELAASKKPHP-SFKSDVYAFGVILLELLTGRCAGDVISGEGAGVDLTDWMQLKVA 1005
+ APE+ + +P SF+SDVYAFG++L EL+TG+ I+ +++
Sbjct: 175 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV-------- 226
Query: 1006 EGHGSDCFDAAVMPEMVNPAAEKGMKEVLGIALRCIRSVSERPGIKTIYEDLSSI 1060
G GS D + V K MK ++ L+ R ERP I ++ +
Sbjct: 227 -GRGSLSPDLS----KVRSNCPKRMKRLMAECLKKKR--DERPSFPRILAEIEEL 274
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 23/169 (13%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
N+ HPN+V L G P + ++ +++ G L L D K P+ W+ +L++ +D
Sbjct: 79 NLNHPNIVKLYGLMHNPPR----MVMEFVPCGDLYHRLLD----KAHPIKWSVKLRLMLD 130
Query: 888 VARGLNYLH-FDRAVPHGNLKATNILLDGPDLN----ARVADYCLHRLMTQAGTIEQILD 942
+A G+ Y+ + + H +L++ NI L D N A+VAD+ L + + +
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVS------ 184
Query: 943 AGVLG---YRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVIS 988
G+LG + APE +++ + K+D Y+F +IL +LTG D S
Sbjct: 185 -GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS 232
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 27/171 (15%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
N+ HPN+V L G P + ++ +++ G L L D K P+ W+ +L++ +D
Sbjct: 79 NLNHPNIVKLYGLMHNPPR----MVMEFVPCGDLYHRLLD----KAHPIKWSVKLRLMLD 130
Query: 888 VARGLNYLH-FDRAVPHGNLKATNILLDGPDLN----ARVADYCLHRLMTQAGTIEQILD 942
+A G+ Y+ + + H +L++ NI L D N A+VAD+ GT +Q +
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF---------GTSQQSVH 181
Query: 943 --AGVLG---YRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVIS 988
+G+LG + APE +++ + K+D Y+F +IL +LTG D S
Sbjct: 182 SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS 232
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
+G S GT Y+ + + + + +Q RH N++ GY
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--- 77
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
T+ + I++ + SL L+ + + + IA A+G++YLH +++ H
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKSIIH 132
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQ---AGTIEQILDAGVLGYRAPELAASKKPH 960
+LK+ NI L DL ++ D+ L + ++ + EQ+ +G + + APE+ + +
Sbjct: 133 RDLKSNNIFLH-EDLTVKIGDFGLATVKSRWSGSHQFEQL--SGSILWMAPEVIRMQDKN 189
Query: 961 P-SFKSDVYAFGVILLELLTGR 981
P SF+SDVYAFG++L EL+TG+
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 23/169 (13%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
N+ HPN+V L G P + ++ +++ G L L D K P+ W+ +L++ +D
Sbjct: 79 NLNHPNIVKLYGLMHNPPR----MVMEFVPCGDLYHRLLD----KAHPIKWSVKLRLMLD 130
Query: 888 VARGLNYLH-FDRAVPHGNLKATNILLDGPDLN----ARVADYCLHRLMTQAGTIEQILD 942
+A G+ Y+ + + H +L++ NI L D N A+VAD+ L + + +
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVS------ 184
Query: 943 AGVLG---YRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVIS 988
G+LG + APE +++ + K+D Y+F +IL +LTG D S
Sbjct: 185 -GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS 232
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
+G S GT Y+ + + + + +Q RH N++ GY
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--- 72
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
T+ + I++ + SL L+ + + + IA A+G++YLH +++ H
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKSIIH 127
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQ---AGTIEQILDAGVLGYRAPELAASKKPH 960
+LK+ NI L DL ++ D+ L + ++ + EQ+ +G + + APE+ + +
Sbjct: 128 RDLKSNNIFLH-EDLTVKIGDFGLATVKSRWSGSHQFEQL--SGSILWMAPEVIRMQDKN 184
Query: 961 P-SFKSDVYAFGVILLELLTGR 981
P SF+SDVYAFG++L EL+TG+
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
+G S GT Y+ + + + + +Q RH N++ GY
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--- 77
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
T+ + I++ + SL L+ + + + IA A+G++YLH +++ H
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKSIIH 132
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQ---AGTIEQILDAGVLGYRAPELAASKKPH 960
+LK+ NI L DL ++ D+ L + ++ + EQ+ +G + + APE+ + +
Sbjct: 133 RDLKSNNIFLH-EDLTVKIGDFGLATVKSRWSGSHQFEQL--SGSILWMAPEVIRMQDKN 189
Query: 961 P-SFKSDVYAFGVILLELLTGR 981
P SF+SDVYAFG++L EL+TG+
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQ 211
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 15/202 (7%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
+G S GT Y+ + + + + +Q RH N++ GY
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
P + I++ + SL L+ + + + IA A+G++YLH +++ H
Sbjct: 76 P---QLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKSIIH 127
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQ---AGTIEQILDAGVLGYRAPELAASKKPH 960
+LK+ NI L DL ++ D+ L + ++ + EQ+ +G + + APE+ + +
Sbjct: 128 RDLKSNNIFLH-EDLTVKIGDFGLATVKSRWSGSHQFEQL--SGSILWMAPEVIRMQDKN 184
Query: 961 P-SFKSDVYAFGVILLELLTGR 981
P SF+SDVYAFG++L EL+TG+
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
+G S GT Y+ + + + + +Q RH N++ GY
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--- 74
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
T+ + I++ + SL L+ + + + IA A+G++YLH +++ H
Sbjct: 75 STKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKSIIH 129
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQ---AGTIEQILDAGVLGYRAPELAASKKPH 960
+LK+ NI L DL ++ D+ L + ++ + EQ+ +G + + APE+ + +
Sbjct: 130 RDLKSNNIFLH-EDLTVKIGDFGLATVKSRWSGSHQFEQL--SGSILWMAPEVIRMQDKN 186
Query: 961 P-SFKSDVYAFGVILLELLTGR 981
P SF+SDVYAFG++L EL+TG+
Sbjct: 187 PYSFQSDVYAFGIVLYELMTGQ 208
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203
Length = 292
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 110/235 (46%), Gaps = 30/235 (12%)
Query: 830 RHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVA 889
RH N++ GY T+ + I++ + SL L+ + + + IA A
Sbjct: 78 RHVNILLFMGY---STKPQLAIVTQWCEGSSLYHHLHASETK----FEMKKLIDIARQTA 130
Query: 890 RGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQ---AGTIEQILDAGVL 946
RG++YLH +++ H +LK+ NI L D ++ D+ L ++ + EQ+ +G +
Sbjct: 131 RGMDYLH-AKSIIHRDLKSNNIFLH-EDNTVKIGDFGLATEKSRWSGSHQFEQL--SGSI 186
Query: 947 GYRAPELAASKKPHP-SFKSDVYAFGVILLELLTGRCAGDVISGEGAGVDLTDWMQLKVA 1005
+ APE+ + +P SF+SDVYAFG++L EL+TG+ I+ +++
Sbjct: 187 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV-------- 238
Query: 1006 EGHGSDCFDAAVMPEMVNPAAEKGMKEVLGIALRCIRSVSERPGIKTIYEDLSSI 1060
G GS D + V K MK ++ L+ R ERP I ++ +
Sbjct: 239 -GRGSLSPDLS----KVRSNCPKRMKRLMAECLKKKR--DERPSFPRILAEIEEL 286
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032
Length = 289
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 109/235 (46%), Gaps = 30/235 (12%)
Query: 830 RHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVA 889
RH N++ GY P + I++ + SL L+ + + + IA A
Sbjct: 78 RHVNILLFMGYSTAP---QLAIVTQWCEGSSLYHHLHASETK----FEMKKLIDIARQTA 130
Query: 890 RGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQ---AGTIEQILDAGVL 946
RG++YLH +++ H +LK+ NI L D ++ D+ L ++ + EQ+ +G +
Sbjct: 131 RGMDYLH-AKSIIHRDLKSNNIFLH-EDNTVKIGDFGLATEKSRWSGSHQFEQL--SGSI 186
Query: 947 GYRAPELAASKKPHP-SFKSDVYAFGVILLELLTGRCAGDVISGEGAGVDLTDWMQLKVA 1005
+ APE+ + +P SF+SDVYAFG++L EL+TG+ I+ +++
Sbjct: 187 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV-------- 238
Query: 1006 EGHGSDCFDAAVMPEMVNPAAEKGMKEVLGIALRCIRSVSERPGIKTIYEDLSSI 1060
G GS D + V K MK ++ L+ R ERP I ++ +
Sbjct: 239 -GRGSLSPDLS----KVRSNCPKRMKRLMAECLKKKR--DERPSFPRILAEIEEL 286
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 86/156 (55%), Gaps = 15/156 (9%)
Query: 830 RHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVA 889
RH N++ GY T+ + I++ + SL L+ + + + IA A
Sbjct: 89 RHVNILLFMGY---STKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTA 141
Query: 890 RGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQ---AGTIEQILDAGVL 946
+G++YLH +++ H +LK+ NI L DL ++ D+ L + ++ + EQ+ +G +
Sbjct: 142 QGMDYLH-AKSIIHRDLKSNNIFLH-EDLTVKIGDFGLATVKSRWSGSHQFEQL--SGSI 197
Query: 947 GYRAPELAASKKPHP-SFKSDVYAFGVILLELLTGR 981
+ APE+ + +P SF+SDVYAFG++L EL+TG+
Sbjct: 198 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 15/204 (7%)
Query: 782 EVLGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYY 841
+ +G S GT Y+ + + + + +Q RH N++ GY
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 100
Query: 842 WGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAV 901
T+ + I++ + SL L+ + + + IA A+G++YLH +++
Sbjct: 101 --STKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKSI 153
Query: 902 PHGNLKATNILLDGPDLNARVADYCLHRLMTQ---AGTIEQILDAGVLGYRAPELAASKK 958
H +LK+ NI L DL ++ D+ L + ++ + EQ+ +G + + APE+ +
Sbjct: 154 IHRDLKSNNIFLH-EDLTVKIGDFGLATVKSRWSGSHQFEQL--SGSILWMAPEVIRMQD 210
Query: 959 PHP-SFKSDVYAFGVILLELLTGR 981
+P SF+SDVYAFG++L EL+TG+
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 15/202 (7%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
+G S GT Y+ + + + + +Q RH N++ GY
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--- 72
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
T+ + I++ + SL L+ + + + IA A+G++YLH +++ H
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKSIIH 127
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQ---AGTIEQILDAGVLGYRAPELAASKKPH 960
+LK+ NI L DL ++ D+ L ++ + EQ+ +G + + APE+ + +
Sbjct: 128 RDLKSNNIFLH-EDLTVKIGDFGLATEKSRWSGSHQFEQL--SGSILWMAPEVIRMQDKN 184
Query: 961 P-SFKSDVYAFGVILLELLTGR 981
P SF+SDVYAFG++L EL+TG+
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 27/213 (12%)
Query: 782 EVLGRSSHGTSYRATLENGMFLTVKWLR----EGVAKQRXXXXXXXXXXXNIRHPNVVGL 837
E++G G YRA G + VK R E +++ ++HPN++ L
Sbjct: 13 EIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 838 RGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP---LTWAQRLKIAVDVARGLNY 894
RG + ++ ++ G L L G++ PP + WA V +ARG+NY
Sbjct: 72 RGV--CLKEPNLCLVMEFARGGPLNRVL---SGKRIPPDILVNWA------VQIARGMNY 120
Query: 895 LHFDRAVP--HGNLKATNILL----DGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
LH + VP H +LK++NIL+ + DL+ ++ L + ++ AG +
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAW 180
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
APE+ + S SDV+++GV+L ELLTG
Sbjct: 181 MAPEVI--RASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 782 EVLGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYY 841
+ +G S GT Y+ + + + + +Q RH N++ GY
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 100
Query: 842 WGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAV 901
T+ + I++ + SL L+ + + + IA A+G++YLH +++
Sbjct: 101 --STKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKSI 153
Query: 902 PHGNLKATNILLDGPDLNARVADYCLHRLMTQ---AGTIEQILDAGVLGYRAPELAASKK 958
H +LK+ NI L DL ++ D+ L ++ + EQ+ +G + + APE+ +
Sbjct: 154 IHRDLKSNNIFLH-EDLTVKIGDFGLATEKSRWSGSHQFEQL--SGSILWMAPEVIRMQD 210
Query: 959 PHP-SFKSDVYAFGVILLELLTGR 981
+P SF+SDVYAFG++L EL+TG+
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 782 EVLGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYY 841
+ +G S GT Y+ + + + + +Q RH N++ GY
Sbjct: 34 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 92
Query: 842 WGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAV 901
T+ + I++ + SL L+ + + + IA A+G++YLH +++
Sbjct: 93 --STKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKSI 145
Query: 902 PHGNLKATNILLDGPDLNARVADYCLHRLMTQ---AGTIEQILDAGVLGYRAPELAASKK 958
H +LK+ NI L DL ++ D+ L ++ + EQ+ +G + + APE+ +
Sbjct: 146 IHRDLKSNNIFLH-EDLTVKIGDFGLATEKSRWSGSHQFEQL--SGSILWMAPEVIRMQD 202
Query: 959 PHP-SFKSDVYAFGVILLELLTGR 981
+P SF+SDVYAFG++L EL+TG+
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 11/199 (5%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
+G S GT Y+ + + + + + +Q RH N++ GY
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM-- 101
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
T+ I++ + SL L+ + + Q + IA A+G++YLH + + H
Sbjct: 102 -TKDNLAIVTQWCEGSSLYKHLHVQETK----FQMFQLIDIARQTAQGMDYLH-AKNIIH 155
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILD-AGVLGYRAPELAASKKPHP- 961
++K+ NI L L ++ D+ L + ++ +Q+ G + + APE+ + +P
Sbjct: 156 RDMKSNNIFLH-EGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 962 SFKSDVYAFGVILLELLTG 980
SF+SDVY++G++L EL+TG
Sbjct: 215 SFQSDVYSYGIVLYELMTG 233
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 63.2 bits (152), Expect = 7e-10, Method: Composition-based stats.
Identities = 60/199 (30%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
LG+ G + T + +K L+ G IRH +V L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMK-KIRHEKLVQL---YAV 81
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
++ I+++Y+S GSL FL G G L Q + +A +A G+ Y+ V H
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV-H 137
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSF 963
+L+A NIL+ G +L +VAD+ L RL+ + + + APE A + +
Sbjct: 138 RDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF--TI 194
Query: 964 KSDVYAFGVILLELLT-GR 981
KSDV++FG++L EL T GR
Sbjct: 195 KSDVWSFGILLTELTTKGR 213
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 62.8 bits (151), Expect = 9e-10, Method: Composition-based stats.
Identities = 59/199 (29%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
LG+ G + T + +K L+ G +RH +V L Y
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMK-KLRHEKLVQL---YAV 71
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
++ I+++Y+S GSL FL G G L Q + +A +A G+ Y+ V H
Sbjct: 72 VSEEPIXIVTEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASGMAYVERMNYV-H 127
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSF 963
+L+A NIL+ G +L +VAD+ L RL+ + + + APE A + +
Sbjct: 128 RDLRAANILV-GENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRF--TI 184
Query: 964 KSDVYAFGVILLELLT-GR 981
KSDV++FG++L EL T GR
Sbjct: 185 KSDVWSFGILLTELTTKGR 203
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 11/196 (5%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
LG+ G + T + +K L+ G +RH +V L Y
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMK-KLRHEKLVQL---YAV 330
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
++ I+++Y+S GSL FL G G L Q + +A +A G+ Y+ V H
Sbjct: 331 VSEEPIYIVTEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASGMAYVERMNYV-H 386
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSF 963
+L+A NIL+ G +L +VAD+ L RL+ + + + APE A + +
Sbjct: 387 RDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF--TI 443
Query: 964 KSDVYAFGVILLELLT 979
KSDV++FG++L EL T
Sbjct: 444 KSDVWSFGILLTELTT 459
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 59/199 (29%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
LG+ G + T + +K L+ G +RH +V L Y
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMK-KLRHEKLVQL---YAV 74
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
++ I+++Y+S GSL FL G G L Q + +A +A G+ Y+ V H
Sbjct: 75 VSEEPIYIVTEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASGMAYVERMNYV-H 130
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSF 963
+L+A NIL+ G +L +VAD+ L RL+ + + + APE A + +
Sbjct: 131 RDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF--TI 187
Query: 964 KSDVYAFGVILLELLT-GR 981
KSDV++FG++L EL T GR
Sbjct: 188 KSDVWSFGILLTELTTKGR 206
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 11/196 (5%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
LG+ G + T + +K L+ G +RH +V L Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMK-KLRHEKLVQL---YAV 247
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
++ I+++Y+S GSL FL G G L Q + +A +A G+ Y+ V H
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASGMAYVERMNYV-H 303
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSF 963
+L+A NIL+ G +L +VAD+ L RL+ + + + APE A + +
Sbjct: 304 RDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF--TI 360
Query: 964 KSDVYAFGVILLELLT 979
KSDV++FG++L EL T
Sbjct: 361 KSDVWSFGILLTELTT 376
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 11/196 (5%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
LG+ G + T + +K L+ G +RH +V L Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMK-KLRHEKLVQL---YAV 247
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
++ I+++Y+S GSL FL G G L Q + +A +A G+ Y+ V H
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASGMAYVERMNYV-H 303
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSF 963
+L+A NIL+ G +L +VAD+ L RL+ + + + APE A + +
Sbjct: 304 RDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF--TI 360
Query: 964 KSDVYAFGVILLELLT 979
KSDV++FG++L EL T
Sbjct: 361 KSDVWSFGILLTELTT 376
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 59/199 (29%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
LG+ G + T + +K L+ G +RH +V L Y
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMK-KLRHEKLVQL---YAV 70
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
++ I+++Y+S GSL FL G G L Q + +A +A G+ Y+ V H
Sbjct: 71 VSEEPIYIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV-H 126
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSF 963
+L+A NIL+ G +L +VAD+ L RL+ + + + APE A + +
Sbjct: 127 RDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF--TI 183
Query: 964 KSDVYAFGVILLELLT-GR 981
KSDV++FG++L EL T GR
Sbjct: 184 KSDVWSFGILLTELTTKGR 202
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 59/199 (29%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
LG+ G + T + +K L+ G +RH +V L Y
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMK-KLRHEKLVQL---YAV 72
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
++ I+++Y+S GSL FL G G L Q + +A +A G+ Y+ V H
Sbjct: 73 VSEEPIYIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV-H 128
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSF 963
+L+A NIL+ G +L +VAD+ L RL+ + + + APE A + +
Sbjct: 129 RDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF--TI 185
Query: 964 KSDVYAFGVILLELLT-GR 981
KSDV++FG++L EL T GR
Sbjct: 186 KSDVWSFGILLTELTTKGR 204
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 59/199 (29%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
LG+ G + T + +K L+ G +RH +V L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMK-KLRHEKLVQL---YAV 81
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
++ I+++Y+S GSL FL G G L Q + +A +A G+ Y+ V H
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV-H 137
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSF 963
+L+A NIL+ G +L +VAD+ L RL+ + + + APE A + +
Sbjct: 138 RDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF--TI 194
Query: 964 KSDVYAFGVILLELLT-GR 981
KSDV++FG++L EL T GR
Sbjct: 195 KSDVWSFGILLTELTTKGR 213
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 79/152 (51%), Gaps = 10/152 (6%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
+RH +V L Y ++ I+++Y+S GSL FL G G L Q + +A
Sbjct: 236 KLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQ 289
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+A G+ Y+ V H +L+A NIL+ G +L +VAD+ L RL+ + +
Sbjct: 290 IASGMAYVERMNYV-HRDLRAANILV-GENLVCKVADFGLGRLIEDNEYTARQGAKFPIK 347
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ APE A + + KSDV++FG++L EL T
Sbjct: 348 WTAPEAALYGRF--TIKSDVWSFGILLTELTT 377
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 90/196 (45%), Gaps = 11/196 (5%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
LG+ G + T + +K L+ G +RH +V L Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMK-KLRHEKLVQL---YAV 247
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
++ I+ +Y+S GSL FL G G L Q + +A +A G+ Y+ V H
Sbjct: 248 VSEEPIYIVGEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASGMAYVERMNYV-H 303
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSF 963
+L+A NIL+ G +L +VAD+ L RL+ + + + APE A + +
Sbjct: 304 RDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF--TI 360
Query: 964 KSDVYAFGVILLELLT 979
KSDV++FG++L EL T
Sbjct: 361 KSDVWSFGILLTELTT 376
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 59/199 (29%), Positives = 92/199 (46%), Gaps = 12/199 (6%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
LG+ G + T + +K L+ G +RH +V L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMK-KLRHEKLVQL---YAV 81
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
++ I+ +Y+S GSL FL G G L Q + +A +A G+ Y+ V H
Sbjct: 82 VSEEPIYIVCEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV-H 137
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSF 963
+L+A NIL+ G +L +VAD+ L RL+ + + + APE A + +
Sbjct: 138 RDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF--TI 194
Query: 964 KSDVYAFGVILLELLT-GR 981
KSDV++FG++L EL T GR
Sbjct: 195 KSDVWSFGILLTELTTKGR 213
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 59/199 (29%), Positives = 92/199 (46%), Gaps = 12/199 (6%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
LG+ G + T + +K L+ G +RH +V L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMK-KLRHEKLVQL---YAV 81
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
++ I+ +Y+S GSL FL G G L Q + +A +A G+ Y+ V H
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV-H 137
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSF 963
+L+A NIL+ G +L +VAD+ L RL+ + + + APE A + +
Sbjct: 138 RDLRAANILV-GENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRF--TI 194
Query: 964 KSDVYAFGVILLELLT-GR 981
KSDV++FG++L EL T GR
Sbjct: 195 KSDVWSFGILLTELTTKGR 213
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 59/199 (29%), Positives = 92/199 (46%), Gaps = 12/199 (6%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
LG+ G + T + +K L+ G +RH +V L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMK-KLRHEKLVQL---YAV 81
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
++ I+++Y+S GSL FL G G L Q + +A +A G+ Y+ V H
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV-H 137
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSF 963
+L A NIL+ G +L +VAD+ L RL+ + + + APE A + +
Sbjct: 138 RDLAAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF--TI 194
Query: 964 KSDVYAFGVILLELLT-GR 981
KSDV++FG++L EL T GR
Sbjct: 195 KSDVWSFGILLTELTTKGR 213
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 59/199 (29%), Positives = 92/199 (46%), Gaps = 12/199 (6%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
LG+ G + T + +K L+ G +RH +V L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMK-KLRHEKLVQL---YAV 81
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
++ I+ +Y+S GSL FL G G L Q + +A +A G+ Y+ V H
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV-H 137
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSF 963
+L+A NIL+ G +L +VAD+ L RL+ + + + APE A + +
Sbjct: 138 RDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF--TI 194
Query: 964 KSDVYAFGVILLELLT-GR 981
KSDV++FG++L EL T GR
Sbjct: 195 KSDVWSFGILLTELTTKGR 213
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 58/199 (29%), Positives = 92/199 (46%), Gaps = 12/199 (6%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
LG+ G + T + +K L+ G +RH +V L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMK-KLRHEKLVQL---YAV 81
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
++ I+++Y+S G L FL G G L Q + +A +A G+ Y+ V H
Sbjct: 82 VSEEPIYIVTEYMSKGCLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV-H 137
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSF 963
+L+A NIL+ G +L +VAD+ L RL+ + + + APE A + +
Sbjct: 138 RDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF--TI 194
Query: 964 KSDVYAFGVILLELLT-GR 981
KSDV++FG++L EL T GR
Sbjct: 195 KSDVWSFGILLTELTTKGR 213
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
LG+ G + T + +K L+ G +RH +V L Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMK-KLRHEKLVQL---YAV 78
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
++ I+++Y++ GSL FL G G L Q + ++ +A G+ Y+ V H
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFL---KGETGKYLRLPQLVDMSAQIASGMAYVERMNYV-H 134
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSF 963
+L+A NIL+ G +L +VAD+ L RL+ + + + APE A + +
Sbjct: 135 RDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF--TI 191
Query: 964 KSDVYAFGVILLELLT-GR 981
KSDV++FG++L EL T GR
Sbjct: 192 KSDVWSFGILLTELTTKGR 210
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
++H +V L Y TQ I+++Y+ GSL FL G K LT + L +A +
Sbjct: 65 LQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQI 118
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
A G+ ++ +R H +L+A NIL+ L+ ++AD+ L RL+ A + + +
Sbjct: 119 AEGMAFIE-ERNYIHRDLRAANILVSD-TLSCKIADFGLARLIEDAEXTAREGAKFPIKW 176
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT-GR 981
APE A + KSDV++FG++L E++T GR
Sbjct: 177 TAPE--AINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 59.7 bits (143), Expect = 9e-09, Method: Composition-based stats.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
LG+ G + T + +K L+ G +RH +V L Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMK-KLRHEKLVQL---YAV 78
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
++ I+++Y++ GSL FL G G L Q + ++ +A G+ Y+ V H
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFL---KGETGKYLRLPQLVDMSAQIASGMAYVERMNYV-H 134
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSF 963
+L+A NIL+ G +L +VAD+ L RL+ + + + APE A + +
Sbjct: 135 RDLRAANILV-GENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRF--TI 191
Query: 964 KSDVYAFGVILLELLT-GR 981
KSDV++FG++L EL T GR
Sbjct: 192 KSDVWSFGILLTELTTKGR 210
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 11/154 (7%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
++H +V L Y TQ I+++Y+ GSL FL G K LT + L +A +
Sbjct: 61 LQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQI 114
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
A G+ ++ +R H NL+A NIL+ L+ ++AD+ L RL+ + + +
Sbjct: 115 AEGMAFIE-ERNYIHRNLRAANILVSD-TLSCKIADFGLARLIEDNEYTAREGAKFPIKW 172
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT-GR 981
APE A + KSDV++FG++L E++T GR
Sbjct: 173 TAPE--AINYGTFTIKSDVWSFGILLTEIVTHGR 204
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 15/184 (8%)
Query: 801 MFLTVKWLREG-VAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPG 859
+F+ +K L+ G KQR HPNV+ L G T +I+++++ G
Sbjct: 62 IFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKST--PVMIITEFMENG 119
Query: 860 SLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLN 919
SL SFL G+ T Q + + +A G+ YL D H +L A NIL++ +L
Sbjct: 120 SLDSFLRQNDGQ----FTVIQLVGMLRGIAAGMKYLA-DMNYVHRDLAARNILVNS-NLV 173
Query: 920 ARVADYCLHRLM---TQAGTIEQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILL 975
+V+D+ L R + T T L + + + APE +K + SDV+++G+++
Sbjct: 174 CKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSA--SDVWSYGIVMW 231
Query: 976 ELLT 979
E+++
Sbjct: 232 EVMS 235
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 58/199 (29%), Positives = 91/199 (45%), Gaps = 12/199 (6%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
LG+ G + T + +K L+ G +RH +V L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMK-KLRHEKLVQL---YAV 81
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
++ I+ +Y+S G L FL G G L Q + +A +A G+ Y+ V H
Sbjct: 82 VSEEPIYIVMEYMSKGCLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV-H 137
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSF 963
+L+A NIL+ G +L +VAD+ L RL+ + + + APE A + +
Sbjct: 138 RDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF--TI 194
Query: 964 KSDVYAFGVILLELLT-GR 981
KSDV++FG++L EL T GR
Sbjct: 195 KSDVWSFGILLTELTTKGR 213
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 27/220 (12%)
Query: 781 AEVLGRSSHGTSYRAT-LENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRG 839
EVLG+ G + + T E G + +K L + + + HPNV+ G
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 840 YYWGPTQHEKL-ILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFD 898
+ + ++L +++YI G+L + + W+QR+ A D+A G+ YLH
Sbjct: 75 VLY---KDKRLNFITEYIKGGTLRGIIKSMDSQ----YPWSQRVSFAKDIASGMAYLH-S 126
Query: 899 RAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDA----------GVLG- 947
+ H +L + N L+ + N VAD+ L RLM T + L + V+G
Sbjct: 127 MNIIHRDLNSHNCLVR-ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGN 185
Query: 948 --YRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGD 985
+ APE+ + K DV++FG++L E++ GR D
Sbjct: 186 PYWMAPEMINGRSYDE--KVDVFSFGIVLCEII-GRVNAD 222
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 12/199 (6%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
LG G + T + +K L+ G ++H +V L Y
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMK-KLKHDKLVQL---YAV 72
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
++ I+++Y++ GSL FL D GR L + +A VA G+ Y+ + H
Sbjct: 73 VSEEPIYIVTEYMNKGSLLDFLKDGEGRA---LKLPNLVDMAAQVAAGMAYIERMNYI-H 128
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSF 963
+L++ NIL+ G L ++AD+ L RL+ + + + APE A + +
Sbjct: 129 RDLRSANILV-GNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRF--TI 185
Query: 964 KSDVYAFGVILLELLT-GR 981
KSDV++FG++L EL+T GR
Sbjct: 186 KSDVWSFGILLTELVTKGR 204
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 13/180 (7%)
Query: 803 LTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSL 861
+ +K L+ G KQR HPN++ L G +I+++Y+ GSL
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVV--TKCKPVMIITEYMENGSL 117
Query: 862 ASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNAR 921
+FL GR T Q + + + G+ YL D + H +L A NIL++ +L +
Sbjct: 118 DAFLRKNDGR----FTVIQLVGMLRGIGSGMKYLS-DMSAVHRDLAARNILVNS-NLVCK 171
Query: 922 VADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPHPSFKSDVYAFGVILLELLT 979
V+D+ + R++ G + R APE A +K + SDV+++G+++ E+++
Sbjct: 172 VSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSA--SDVWSYGIVMWEVMS 229
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 15/184 (8%)
Query: 801 MFLTVKWLREG-VAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPG 859
+F+ +K L+ G KQR HPNV+ L G T +I+++++ G
Sbjct: 36 IFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKST--PVMIITEFMENG 93
Query: 860 SLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLN 919
SL SFL G+ T Q + + +A G+ YL D H L A NIL++ +L
Sbjct: 94 SLDSFLRQNDGQ----FTVIQLVGMLRGIAAGMKYLA-DMNYVHRALAARNILVNS-NLV 147
Query: 920 ARVADYCLHRLM---TQAGTIEQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILL 975
+V+D+ L R + T T L + + + APE +K + SDV+++G+++
Sbjct: 148 CKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSA--SDVWSYGIVMW 205
Query: 976 ELLT 979
E+++
Sbjct: 206 EVMS 209
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 11/154 (7%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
++H +V L Y TQ I+++Y+ GSL FL G K LT + L +A +
Sbjct: 65 LQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQI 118
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
A G+ ++ +R H +L+A NIL+ L+ ++AD+ L RL+ + + +
Sbjct: 119 AEGMAFIE-ERNYIHRDLRAANILVSD-TLSCKIADFGLARLIEDNEXTAREGAKFPIKW 176
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT-GR 981
APE A + KSDV++FG++L E++T GR
Sbjct: 177 TAPE--AINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 11/154 (7%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
++H +V L Y TQ I+++Y+ GSL FL G K LT + L +A +
Sbjct: 73 LQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQI 126
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
A G+ ++ +R H +L+A NIL+ L+ ++AD+ L RL+ + + +
Sbjct: 127 AEGMAFIE-ERNYIHRDLRAANILVSD-TLSCKIADFGLARLIEDNEXTAREGAKFPIKW 184
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT-GR 981
APE A + KSDV++FG++L E++T GR
Sbjct: 185 TAPE--AINYGTFTIKSDVWSFGILLTEIVTHGR 216
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 11/154 (7%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
++H +V L Y TQ I+++Y+ GSL FL G K LT + L +A +
Sbjct: 71 LQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQI 124
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
A G+ ++ +R H +L+A NIL+ L+ ++AD+ L RL+ + + +
Sbjct: 125 AEGMAFIE-ERNYIHRDLRAANILVSD-TLSCKIADFGLARLIEDNEXTAREGAKFPIKW 182
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT-GR 981
APE A + KSDV++FG++L E++T GR
Sbjct: 183 TAPE--AINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 11/154 (7%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
++H +V L Y TQ I+++Y+ GSL FL G K LT + L +A +
Sbjct: 66 LQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQI 119
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
A G+ ++ +R H +L+A NIL+ L+ ++AD+ L RL+ + + +
Sbjct: 120 AEGMAFIE-ERNYIHRDLRAANILVSD-TLSCKIADFGLARLIEDNEXTAREGAKFPIKW 177
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT-GR 981
APE A + KSDV++FG++L E++T GR
Sbjct: 178 TAPE--AINYGTFTIKSDVWSFGILLTEIVTHGR 209
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 11/154 (7%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
++H +V L Y TQ I+++Y+ GSL FL G K LT + L +A +
Sbjct: 67 LQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQI 120
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
A G+ ++ +R H +L+A NIL+ L+ ++AD+ L RL+ + + +
Sbjct: 121 AEGMAFIE-ERNYIHRDLRAANILVSD-TLSCKIADFGLARLIEDNEXTAREGAKFPIKW 178
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT-GR 981
APE A + KSDV++FG++L E++T GR
Sbjct: 179 TAPE--AINYGTFTIKSDVWSFGILLTEIVTHGR 210
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 11/154 (7%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
++H +V L Y TQ I+++Y+ GSL FL G K LT + L +A +
Sbjct: 65 LQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQI 118
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
A G+ ++ +R H +L+A NIL+ L+ ++AD+ L RL+ + + +
Sbjct: 119 AEGMAFIE-ERNYIHRDLRAANILVSD-TLSCKIADFGLARLIEDNEXTAREGAKFPIKW 176
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT-GR 981
APE A + KSDV++FG++L E++T GR
Sbjct: 177 TAPE--AINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 11/154 (7%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
++H +V L Y TQ I+++Y+ GSL FL G K LT + L +A +
Sbjct: 74 LQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQI 127
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
A G+ ++ +R H +L+A NIL+ L+ ++AD+ L RL+ + + +
Sbjct: 128 AEGMAFIE-ERNYIHRDLRAANILVSD-TLSCKIADFGLARLIEDNEXTAREGAKFPIKW 185
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT-GR 981
APE A + KSDV++FG++L E++T GR
Sbjct: 186 TAPE--AINYGTFTIKSDVWSFGILLTEIVTHGR 217
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 13/180 (7%)
Query: 803 LTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSL 861
+ +K L+ G KQR HPN++ L G +I+++Y+ GSL
Sbjct: 39 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVV--TKCKPVMIITEYMENGSL 96
Query: 862 ASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNAR 921
+FL GR T Q + + + G+ YL D + H +L A NIL++ +L +
Sbjct: 97 DAFLRKNDGR----FTVIQLVGMLRGIGSGMKYLS-DMSYVHRDLAARNILVNS-NLVCK 150
Query: 922 VADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPHPSFKSDVYAFGVILLELLT 979
V+D+ + R++ G + R APE A +K + SDV+++G+++ E+++
Sbjct: 151 VSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSA--SDVWSYGIVMWEVMS 208
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 13/180 (7%)
Query: 803 LTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSL 861
+ +K L+ G KQR HPN++ L G +I+++Y+ GSL
Sbjct: 45 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVV--TKCKPVMIITEYMENGSL 102
Query: 862 ASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNAR 921
+FL GR T Q + + + G+ YL D + H +L A NIL++ +L +
Sbjct: 103 DAFLRKNDGR----FTVIQLVGMLRGIGSGMKYLS-DMSYVHRDLAARNILVNS-NLVCK 156
Query: 922 VADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPHPSFKSDVYAFGVILLELLT 979
V+D+ + R++ G + R APE A +K + SDV+++G+++ E+++
Sbjct: 157 VSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSA--SDVWSYGIVMWEVMS 214
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 11/154 (7%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
++H +V L Y TQ I+++Y+ GSL FL G K LT + L +A +
Sbjct: 71 LQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQI 124
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
A G+ ++ +R H +L+A NIL+ L+ ++AD+ L RL+ + + +
Sbjct: 125 AEGMAFIE-ERNYIHRDLRAANILVSD-TLSCKIADFGLARLIEDNEYTAREGAKFPIKW 182
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT-GR 981
APE A + KSDV++FG++L E++T GR
Sbjct: 183 TAPE--AINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 11/154 (7%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
++H +V L Y TQ I+++Y+ GSL FL G K LT + L +A +
Sbjct: 75 LQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQI 128
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
A G+ ++ +R H +L+A NIL+ L+ ++AD+ L RL+ + + +
Sbjct: 129 AEGMAFIE-ERNYIHRDLRAANILVSD-TLSCKIADFGLARLIEDNEYTAREGAKFPIKW 186
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT-GR 981
APE A + KSDV++FG++L E++T GR
Sbjct: 187 TAPE--AINYGTFTIKSDVWSFGILLTEIVTHGR 218
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 11/154 (7%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
++H +V L Y TQ I+++Y+ GSL FL G K LT + L +A +
Sbjct: 65 LQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQI 118
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
A G+ ++ +R H +L+A NIL+ L+ ++AD+ L RL+ + + +
Sbjct: 119 AEGMAFIE-ERNYIHRDLRAANILVSD-TLSCKIADFGLARLIEDNEYTAREGAKFPIKW 176
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT-GR 981
APE A + KSDV++FG++L E++T GR
Sbjct: 177 TAPE--AINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 11/154 (7%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
++H +V L Y TQ I+++Y+ GSL FL G K LT + L +A +
Sbjct: 60 LQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQI 113
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
A G+ ++ +R H +L+A NIL+ L+ ++AD+ L RL+ + + +
Sbjct: 114 AEGMAFIE-ERNYIHRDLRAANILVSD-TLSCKIADFGLARLIEDNEYTAREGAKFPIKW 171
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT-GR 981
APE A + KSDV++FG++L E++T GR
Sbjct: 172 TAPE--AINYGTFTIKSDVWSFGILLTEIVTHGR 203
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 11/154 (7%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
++H +V L Y TQ I+++Y+ GSL FL G K LT + L +A +
Sbjct: 70 LQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQI 123
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
A G+ ++ +R H +L+A NIL+ L+ ++AD+ L RL+ + + +
Sbjct: 124 AEGMAFIE-ERNYIHRDLRAANILVSD-TLSCKIADFGLARLIEDNEYTAREGAKFPIKW 181
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT-GR 981
APE A + KSDV++FG++L E++T GR
Sbjct: 182 TAPE--AINYGTFTIKSDVWSFGILLTEIVTHGR 213
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 803 LTVKWLREG-VAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSL 861
+ +K L+ G +QR HPN++ L G +I+++Y+ GSL
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVV--TRGRLAMIVTEYMENGSL 137
Query: 862 ASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNAR 921
+FL G+ T Q + + V G+ YL D H +L A N+L+D +L +
Sbjct: 138 DTFLRTHDGQ----FTIMQLVGMLRGVGAGMRYLS-DLGYVHRDLAARNVLVDS-NLVCK 191
Query: 922 VADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPHPSFKSDVYAFGVILLELL 978
V+D+ L R++ G + R APE A + S SDV++FGV++ E+L
Sbjct: 192 VSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTF--SSASDVWSFGVVMWEVL 248
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 803 LTVKWLREG-VAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSL 861
+ +K L+ G +QR HPN++ L G +I+++Y+ GSL
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVV--TRGRLAMIVTEYMENGSL 137
Query: 862 ASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNAR 921
+FL G+ T Q + + V G+ YL D H +L A N+L+D +L +
Sbjct: 138 DTFLRTHDGQ----FTIMQLVGMLRGVGAGMRYLS-DLGYVHRDLAARNVLVDS-NLVCK 191
Query: 922 VADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPHPSFKSDVYAFGVILLELL 978
V+D+ L R++ G + R APE A + S SDV++FGV++ E+L
Sbjct: 192 VSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTF--SSASDVWSFGVVMWEVL 248
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 803 LTVKWLREG-VAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSL 861
+ +K L+ G KQR HPN++ L G +I+++Y+ GSL
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEYMENGSL 133
Query: 862 ASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNAR 921
SFL + T Q + + +A G+ YL D H +L A NIL++ +L +
Sbjct: 134 DSFLRKHDAQ----FTVIQLVGMLRGIASGMKYLS-DMGFVHRDLAARNILINS-NLVCK 187
Query: 922 VADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPHPSFKSDVYAFGVILLELLT 979
V+D+ L R++ G + R +PE A +K + SDV+++G++L E+++
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA--SDVWSYGIVLWEVMS 245
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 19/181 (10%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
+ HP +V G ++ I+++YIS G L ++L R KG L +Q L++ DV
Sbjct: 60 LSHPKLVKFYGVC--SKEYPIYIVTEYISNGCLLNYL--RSHGKG--LEPSQLLEMCYDV 113
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
G+ +L + + H +L A N L+D DL +V+D+ + R + + + + +
Sbjct: 114 CEGMAFLESHQFI-HRDLAARNCLVD-RDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKW 171
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT-GRCAGDVISGEGAGVDLTDWMQLKVAEG 1007
APE+ K S KSDV+AFG+++ E+ + G+ D+ + + LKV++G
Sbjct: 172 SAPEVFHYFKY--SSKSDVWAFGILMWEVFSLGKMPYDLYTNSE--------VVLKVSQG 221
Query: 1008 H 1008
H
Sbjct: 222 H 222
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 803 LTVKWLREG-VAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSL 861
+ +K L+ G KQR HPN++ L G +I+++Y+ GSL
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEYMENGSL 133
Query: 862 ASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNAR 921
SFL + T Q + + +A G+ YL D H +L A NIL++ +L +
Sbjct: 134 DSFLRKHDAQ----FTVIQLVGMLRGIASGMKYLS-DMGYVHRDLAARNILINS-NLVCK 187
Query: 922 VADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPHPSFKSDVYAFGVILLELLT 979
V+D+ L R++ G + R +PE A +K + SDV+++G++L E+++
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA--SDVWSYGIVLWEVMS 245
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 803 LTVKWLREG-VAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSL 861
+ +K L+ G KQR HPN++ L G +I+++Y+ GSL
Sbjct: 64 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEYMENGSL 121
Query: 862 ASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNAR 921
SFL + T Q + + +A G+ YL D H +L A NIL++ +L +
Sbjct: 122 DSFLRKHDAQ----FTVIQLVGMLRGIASGMKYLS-DMGYVHRDLAARNILINS-NLVCK 175
Query: 922 VADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPHPSFKSDVYAFGVILLELLT 979
V+D+ L R++ G + R +PE A +K + SDV+++G++L E+++
Sbjct: 176 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA--SDVWSYGIVLWEVMS 233
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
N+ H N+V +G + ++ +++ GSL +L P K + Q+LK AV
Sbjct: 67 NLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNK-INLKQQLKYAVQ 122
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLM---TQAGTIEQILDAG 944
+ +G++YL R H +L A N+L++ + ++ D+ L + + + T++ D+
Sbjct: 123 ICKGMDYLG-SRQYVHRDLAARNVLVES-EHQVKIGDFGLTKAIETDKEXXTVKDDRDSP 180
Query: 945 VLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
V Y APE K + SDV++FGV L ELLT
Sbjct: 181 VFWY-APECLMQSKFY--IASDVWSFGVTLHELLT 212
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 13/180 (7%)
Query: 803 LTVKWLREG-VAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSL 861
+ +K L+ G KQR HPN++ L G +I+++Y+ GSL
Sbjct: 53 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVV--TKSKPVMIVTEYMENGSL 110
Query: 862 ASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNAR 921
+FL G+ T Q + + ++ G+ YL D H +L A NIL++ +L +
Sbjct: 111 DTFLKKNDGQ----FTVIQLVGMLRGISAGMKYLS-DMGYVHRDLAARNILINS-NLVCK 164
Query: 922 VADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPHPSFKSDVYAFGVILLELLT 979
V+D+ L R++ G + R APE A +K + SDV+++G+++ E+++
Sbjct: 165 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSA--SDVWSYGIVMWEVVS 222
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 803 LTVKWLREG-VAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSL 861
+ +K L+ G KQR HPN++ L G +I+++Y+ GSL
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEYMENGSL 133
Query: 862 ASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNAR 921
SFL + T Q + + +A G+ YL D H +L A NIL++ +L +
Sbjct: 134 DSFLRKHDAQ----FTVIQLVGMLRGIASGMKYLS-DMGYVHRDLAARNILINS-NLVCK 187
Query: 922 VADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPHPSFKSDVYAFGVILLELLT 979
V+D+ L R++ G + R +PE A +K + SDV+++G++L E+++
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA--SDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 803 LTVKWLREG-VAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSL 861
+ +K L+ G KQR HPN++ L G +I+++Y+ GSL
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEYMENGSL 133
Query: 862 ASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNAR 921
SFL + T Q + + +A G+ YL D H +L A NIL++ +L +
Sbjct: 134 DSFLRKHDAQ----FTVIQLVGMLRGIASGMKYLS-DMGYVHRDLAARNILINS-NLVCK 187
Query: 922 VADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPHPSFKSDVYAFGVILLELLT 979
V+D+ L R++ G + R +PE A +K + SDV+++G++L E+++
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA--SDVWSYGIVLWEVMS 245
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
N+ H N+V +G + ++ +++ GSL +L P K + Q+LK AV
Sbjct: 79 NLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNK-INLKQQLKYAVQ 134
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLM---TQAGTIEQILDAG 944
+ +G++YL R H +L A N+L++ + ++ D+ L + + + T++ D+
Sbjct: 135 ICKGMDYLG-SRQYVHRDLAARNVLVES-EHQVKIGDFGLTKAIETDKEXXTVKDDRDSP 192
Query: 945 VLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
V Y APE K + SDV++FGV L ELLT
Sbjct: 193 VFWY-APECLMQSKFY--IASDVWSFGVTLHELLT 224
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 803 LTVKWLREG-VAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSL 861
+ +K L+ G KQR HPN++ L G +I+++Y+ GSL
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEYMENGSL 133
Query: 862 ASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNAR 921
SFL + T Q + + +A G+ YL D H +L A NIL++ +L +
Sbjct: 134 DSFLRKHDAQ----FTVIQLVGMLRGIASGMKYLS-DMGYVHRDLAARNILINS-NLVCK 187
Query: 922 VADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPHPSFKSDVYAFGVILLELLT 979
V+D+ L R++ G + R +PE A +K + SDV+++G++L E+++
Sbjct: 188 VSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA--SDVWSYGIVLWEVMS 245
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 803 LTVKWLREG-VAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSL 861
+ +K L+ G KQR HPN++ L G +I+++Y+ GSL
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEYMENGSL 104
Query: 862 ASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNAR 921
SFL + T Q + + +A G+ YL D H +L A NIL++ +L +
Sbjct: 105 DSFLRKHDAQ----FTVIQLVGMLRGIASGMKYLS-DMGYVHRDLAARNILINS-NLVCK 158
Query: 922 VADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPHPSFKSDVYAFGVILLELLT 979
V+D+ L R++ G + R +PE A +K + SDV+++G++L E+++
Sbjct: 159 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA--SDVWSYGIVLWEVMS 216
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 16/154 (10%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFL--YDRPGRKGPPLTWAQRLKIAV 886
+ HPN+V L + T+ ++ +Y S G + +L + R K + Q
Sbjct: 71 LNHPNIVKL--FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ------ 122
Query: 887 DVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVL 946
+ + Y H R V H +LKA N+LLD D+N ++AD+ T G ++ G
Sbjct: 123 -IVSAVQYCHQKRIV-HRDLKAENLLLDA-DMNIKIADFGFSNEFTVGGKLDAF--CGAP 177
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
Y APEL KK + + DV++ GVIL L++G
Sbjct: 178 PYAAPELFQGKK-YDGPEVDVWSLGVILYTLVSG 210
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 803 LTVKWLREG-VAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSL 861
+ +K L+ G KQR HPN++ L G +I+++Y+ GSL
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEYMENGSL 133
Query: 862 ASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNAR 921
SFL + T Q + + +A G+ YL D H +L A NIL++ +L +
Sbjct: 134 DSFLRKHDAQ----FTVIQLVGMLRGIASGMKYLS-DMGYVHRDLAARNILINS-NLVCK 187
Query: 922 VADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPHPSFKSDVYAFGVILLELLT 979
V+D+ L R++ G + R +PE A +K + SDV+++G++L E+++
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA--SDVWSYGIVLWEVMS 245
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 803 LTVKWLREG-VAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSL 861
+ +K L+ G KQR HPN++ L G +I+++Y+ GSL
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEYMENGSL 133
Query: 862 ASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNAR 921
SFL + T Q + + +A G+ YL D H +L A NIL++ +L +
Sbjct: 134 DSFLRKHDAQ----FTVIQLVGMLRGIASGMKYLS-DMGYVHRDLAARNILINS-NLVCK 187
Query: 922 VADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPHPSFKSDVYAFGVILLELLT 979
V+D+ L R++ G + R +PE A +K + SDV+++G++L E+++
Sbjct: 188 VSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA--SDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 803 LTVKWLREG-VAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSL 861
+ +K L+ G KQR HPN++ L G +I+++Y+ GSL
Sbjct: 74 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEYMENGSL 131
Query: 862 ASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNAR 921
SFL + T Q + + +A G+ YL D H +L A NIL++ +L +
Sbjct: 132 DSFLRKHDAQ----FTVIQLVGMLRGIASGMKYLS-DMGYVHRDLAARNILINS-NLVCK 185
Query: 922 VADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPHPSFKSDVYAFGVILLELLT 979
V+D+ L R++ G + R +PE A +K + SDV+++G++L E+++
Sbjct: 186 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA--SDVWSYGIVLWEVMS 243
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 16/154 (10%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFL--YDRPGRKGPPLTWAQRLKIAV 886
+ HPN+V L + T+ ++ +Y S G + +L + R K + Q
Sbjct: 68 LNHPNIVKL--FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ------ 119
Query: 887 DVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVL 946
+ + Y H R V H +LKA N+LLD D+N ++AD+ T G ++ G
Sbjct: 120 -IVSAVQYCHQKRIV-HRDLKAENLLLDA-DMNIKIADFGFSNEFTVGGKLDTF--CGSP 174
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
Y APEL KK + + DV++ GVIL L++G
Sbjct: 175 PYAAPELFQGKK-YDGPEVDVWSLGVILYTLVSG 207
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
+ HPNV+ L G P ++L Y+ G L F+ R ++ P T + + V
Sbjct: 79 LNHPNVLALIGIMLPPEGLPHVLLP-YMCHGDLLQFI--RSPQRNP--TVKDLISFGLQV 133
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHR--LMTQAGTIEQILDAGVL 946
ARG+ YL + V H +L A N +LD +VAD+ L R L + +++Q A L
Sbjct: 134 ARGMEYLAEQKFV-HRDLAARNCMLD-ESFTVKVADFGLARDILDREYYSVQQHRHAR-L 190
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ L + + + KSDV++FGV+L ELLT
Sbjct: 191 PVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
I+HPN+V L G + I++++++ G+L +L + ++ + L +A
Sbjct: 272 EIKHPNLVQLLGV--CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV---LLYMATQ 326
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
++ + YL + H NL A N L+ G + +VAD+ L RLMT +
Sbjct: 327 ISSAMEYLEKKNFI-HRNLAARNCLV-GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 384
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ APE A K S KSDV+AFGV+L E+ T
Sbjct: 385 WTAPESLAYNKF--SIKSDVWAFGVLLWEIAT 414
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 16/170 (9%)
Query: 813 AKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRK 872
+K+R N++HPN+V R + I+ DY G L + +K
Sbjct: 64 SKEREESRREVAVLANMKHPNIVQYRESF--EENGSLYIVMDYCEGGDLFKRI---NAQK 118
Query: 873 GPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMT 932
G Q L V + L ++H DR + H ++K+ NI L D ++ D+ + R++
Sbjct: 119 GVLFQEDQILDWFVQICLALKHVH-DRKILHRDIKSQNIFLT-KDGTVQLGDFGIARVLN 176
Query: 933 QAGTIEQILDAGVLG---YRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
T+E L +G Y +PE+ + KP+ + KSD++A G +L EL T
Sbjct: 177 --STVE--LARACIGTPYYLSPEICEN-KPYNN-KSDIWALGCVLYELCT 220
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
+++H N+V +G + + ++ +Y+ GSL +L R + + L+
Sbjct: 68 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQ 123
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAG--- 944
+ +G+ YL R + H NL NIL++ + ++ D+ L +++ Q ++ + G
Sbjct: 124 ICKGMEYLGTKRYI-HRNLATRNILVENEN-RVKIGDFGLTKVLPQDKEYYKVKEPGESP 181
Query: 945 VLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ Y L SK S SDV++FGV+L EL T
Sbjct: 182 IFWYAPESLTESKF---SVASDVWSFGVVLYELFT 213
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 10/182 (5%)
Query: 800 GMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPG 859
G + VK L+ Q+ + +V RG +GP + E ++ +Y+ G
Sbjct: 36 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSG 95
Query: 860 SLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLN 919
L FL R L ++ L + + +G+ YL R V H +L A NIL++ + +
Sbjct: 96 CLRDFLQRHRAR----LDASRLLLYSSQICKGMEYLGSRRCV-HRDLAARNILVES-EAH 149
Query: 920 ARVADYCLHRLMTQAGTIEQILDAGV--LGYRAPELAASKKPHPSFKSDVYAFGVILLEL 977
++AD+ L +L+ + + G + + APE + S +SDV++FGV+L EL
Sbjct: 150 VKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIF--SRQSDVWSFGVVLYEL 207
Query: 978 LT 979
T
Sbjct: 208 FT 209
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
I+HPN+V L G + I++++++ G+L +L + ++ + L +A +
Sbjct: 270 IKHPNLVQLLGV--CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQI 324
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ + YL + H NL A N L+ G + +VAD+ L RLMT + +
Sbjct: 325 SSAMEYLEKKNFI-HRNLAARNCLV-GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 382
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT 979
APE A K S KSDV+AFGV+L E+ T
Sbjct: 383 TAPESLAYNKF--SIKSDVWAFGVLLWEIAT 411
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 782 EVLGRSSHGTSYRATLENG-----MFLTVKWLREG-VAKQRXXXXXXXXXXXNIRHPNVV 835
+V+G G Y+ L+ + + +K L+ G KQR H N++
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYL 895
L G +I+++Y+ G+L FL ++ G + Q + + +A G+ YL
Sbjct: 110 RLEGVI--SKYKPMMIITEYMENGALDKFLREKDGE----FSVLQLVGMLRGIAAGMKYL 163
Query: 896 HFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYR--APEL 953
V H +L A NIL++ +L +V+D+ L R++ G + R APE
Sbjct: 164 ANMNYV-HRDLAARNILVNS-NLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 221
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
+ +K + SDV++FG+++ E++T
Sbjct: 222 ISYRKFTSA--SDVWSFGIVMWEVMT 245
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
I+HPN+V L G + I++++++ G+L +L + ++ + L +A +
Sbjct: 312 IKHPNLVQLLGV--CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQI 366
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ + YL + H NL A N L+ G + +VAD+ L RLMT + +
Sbjct: 367 SSAMEYLEKKNFI-HRNLAARNCLV-GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 424
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT 979
APE A K S KSDV+AFGV+L E+ T
Sbjct: 425 TAPESLAYNKF--SIKSDVWAFGVLLWEIAT 453
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
+++H N+V +G + + ++ +Y+ GSL +L R + + L+
Sbjct: 65 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQ 120
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAG--- 944
+ +G+ YL R + H +L NIL++ + ++ D+ L +++ Q ++ + G
Sbjct: 121 ICKGMEYLGTKRYI-HRDLATRNILVENEN-RVKIGDFGLTKVLPQDKEXXKVKEPGESP 178
Query: 945 VLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ Y L SK S SDV++FGV+L EL T
Sbjct: 179 IFWYAPESLTESKF---SVASDVWSFGVVLYELFT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
+++H N+V +G + + ++ +Y+ GSL +L R + + L+
Sbjct: 71 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQ 126
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAG--- 944
+ +G+ YL R + H +L NIL++ + ++ D+ L +++ Q ++ + G
Sbjct: 127 ICKGMEYLGTKRYI-HRDLATRNILVENEN-RVKIGDFGLTKVLPQDKEXXKVKEPGESP 184
Query: 945 VLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ Y L SK S SDV++FGV+L EL T
Sbjct: 185 IFWYAPESLTESKF---SVASDVWSFGVVLYELFT 216
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
+++H N+V +G + + ++ +Y+ GSL +L R + + L+
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQ 125
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAG--- 944
+ +G+ YL R + H +L NIL++ + ++ D+ L +++ Q ++ + G
Sbjct: 126 ICKGMEYLGTKRYI-HRDLATRNILVENEN-RVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 945 VLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ Y L SK S SDV++FGV+L EL T
Sbjct: 184 IFWYAPESLTESKF---SVASDVWSFGVVLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
+++H N+V +G + + ++ +Y+ GSL +L R + + L+
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQ 122
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAG--- 944
+ +G+ YL R + H +L NIL++ + ++ D+ L +++ Q ++ + G
Sbjct: 123 ICKGMEYLGTKRYI-HRDLATRNILVENEN-RVKIGDFGLTKVLPQDKEXXKVKEPGESP 180
Query: 945 VLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ Y L SK S SDV++FGV+L EL T
Sbjct: 181 IFWYAPESLTESKF---SVASDVWSFGVVLYELFT 212
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
+++H N+V +G + + ++ +Y+ GSL +L R + + L+
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQ 122
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAG--- 944
+ +G+ YL R + H +L NIL++ + ++ D+ L +++ Q ++ + G
Sbjct: 123 ICKGMEYLGTKRYI-HRDLATRNILVENEN-RVKIGDFGLTKVLPQDKEXXKVKEPGESP 180
Query: 945 VLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ Y L SK S SDV++FGV+L EL T
Sbjct: 181 IFWYAPESLTESKF---SVASDVWSFGVVLYELFT 212
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
+++H N+V +G + + ++ +Y+ GSL +L R + + L+
Sbjct: 98 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQ 153
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAG--- 944
+ +G+ YL R + H +L NIL++ + ++ D+ L +++ Q ++ + G
Sbjct: 154 ICKGMEYLGTKRYI-HRDLATRNILVENEN-RVKIGDFGLTKVLPQDKEXXKVKEPGESP 211
Query: 945 VLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ Y L SK S SDV++FGV+L EL T
Sbjct: 212 IFWYAPESLTESKF---SVASDVWSFGVVLYELFT 243
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
+++H N+V +G + + ++ +Y+ GSL +L R + + L+
Sbjct: 66 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQ 121
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAG--- 944
+ +G+ YL R + H +L NIL++ + ++ D+ L +++ Q ++ + G
Sbjct: 122 ICKGMEYLGTKRYI-HRDLATRNILVENEN-RVKIGDFGLTKVLPQDKEXXKVKEPGESP 179
Query: 945 VLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ Y L SK S SDV++FGV+L EL T
Sbjct: 180 IFWYAPESLTESKF---SVASDVWSFGVVLYELFT 211
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
+++H N+V +G + + ++ +Y+ GSL +L R + + L+
Sbjct: 72 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQ 127
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAG--- 944
+ +G+ YL R + H +L NIL++ + ++ D+ L +++ Q ++ + G
Sbjct: 128 ICKGMEYLGTKRYI-HRDLATRNILVENEN-RVKIGDFGLTKVLPQDKEXXKVKEPGESP 185
Query: 945 VLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ Y L SK S SDV++FGV+L EL T
Sbjct: 186 IFWYAPESLTESKF---SVASDVWSFGVVLYELFT 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
+++H N+V +G + + ++ +Y+ GSL +L R + + L+
Sbjct: 74 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQ 129
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAG--- 944
+ +G+ YL R + H +L NIL++ + ++ D+ L +++ Q ++ + G
Sbjct: 130 ICKGMEYLGTKRYI-HRDLATRNILVENEN-RVKIGDFGLTKVLPQDKEXXKVKEPGESP 187
Query: 945 VLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ Y L SK S SDV++FGV+L EL T
Sbjct: 188 IFWYAPESLTESKF---SVASDVWSFGVVLYELFT 219
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
+++H N+V +G + + ++ +Y+ GSL +L R + + L+
Sbjct: 73 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQ 128
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAG--- 944
+ +G+ YL R + H +L NIL++ + ++ D+ L +++ Q ++ + G
Sbjct: 129 ICKGMEYLGTKRYI-HRDLATRNILVENEN-RVKIGDFGLTKVLPQDKEXXKVKEPGESP 186
Query: 945 VLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ Y L SK S SDV++FGV+L EL T
Sbjct: 187 IFWYAPESLTESKF---SVASDVWSFGVVLYELFT 218
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
+++H N+V +G + + ++ +Y+ GSL +L R + + L+
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQ 140
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAG--- 944
+ +G+ YL R + H +L NIL++ + ++ D+ L +++ Q ++ + G
Sbjct: 141 ICKGMEYLGTKRYI-HRDLATRNILVENEN-RVKIGDFGLTKVLPQDKEXXKVKEPGESP 198
Query: 945 VLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ Y L SK S SDV++FGV+L EL T
Sbjct: 199 IFWYAPESLTESKF---SVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
+++H N+V +G + + ++ +Y+ GSL +L R + + L+
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQ 140
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAG--- 944
+ +G+ YL R + H +L NIL++ + ++ D+ L +++ Q ++ + G
Sbjct: 141 ICKGMEYLGTKRYI-HRDLATRNILVENEN-RVKIGDFGLTKVLPQDKEXXKVKEPGESP 198
Query: 945 VLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ Y L SK S SDV++FGV+L EL T
Sbjct: 199 IFWYAPESLTESKF---SVASDVWSFGVVLYELFT 230
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 12/152 (7%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
+ HPN+V L + T+ ++ +Y S G + +L GR A+ +I V
Sbjct: 71 LNHPNIVKL--FEVIETEKTLYLVMEYASGGEVFDYLVAH-GRMKEKEARAKFRQIVSAV 127
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
Y H + + H +LKA N+LLDG D+N ++AD+ T ++ G Y
Sbjct: 128 ----QYCH-QKYIVHRDLKAENLLLDG-DMNIKIADFGFSNEFTVGNKLDTF--CGSPPY 179
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
APEL KK + + DV++ GVIL L++G
Sbjct: 180 AAPELFQGKK-YDGPEVDVWSLGVILYTLVSG 210
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
+++H N+V +G + + ++ +Y+ GSL +L R + + L+
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER----IDHIKLLQYTSQ 125
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAG--- 944
+ +G+ YL R + H +L NIL++ + ++ D+ L +++ Q ++ + G
Sbjct: 126 ICKGMEYLGTKRYI-HRDLATRNILVENEN-RVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 945 VLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ Y L SK S SDV++FGV+L EL T
Sbjct: 184 IFWYAPESLTESKF---SVASDVWSFGVVLYELFT 215
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 10/182 (5%)
Query: 800 GMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPG 859
G + VK L+ Q+ + +V RG +GP + ++ +Y+ G
Sbjct: 52 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 111
Query: 860 SLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLN 919
L FL R L ++ L + + +G+ YL R V H +L A NIL++ + +
Sbjct: 112 CLRDFLQRHRAR----LDASRLLLYSSQICKGMEYLGSRRCV-HRDLAARNILVES-EAH 165
Query: 920 ARVADYCLHRLMTQAGTIEQILDAGV--LGYRAPELAASKKPHPSFKSDVYAFGVILLEL 977
++AD+ L +L+ + + G + + APE + S +SDV++FGV+L EL
Sbjct: 166 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF--SRQSDVWSFGVVLYEL 223
Query: 978 LT 979
T
Sbjct: 224 FT 225
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 13/180 (7%)
Query: 803 LTVKWLREG-VAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSL 861
+ +K L+ G KQR HPN++ L G +I+++ + GSL
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEXMENGSL 133
Query: 862 ASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNAR 921
SFL + T Q + + +A G+ YL D H +L A NIL++ +L +
Sbjct: 134 DSFLRKHDAQ----FTVIQLVGMLRGIASGMKYLS-DMGAVHRDLAARNILINS-NLVCK 187
Query: 922 VADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPHPSFKSDVYAFGVILLELLT 979
V+D+ L R++ G + R +PE A +K + SDV+++G++L E+++
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA--SDVWSYGIVLWEVMS 245
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
+++H N+V +G + + ++ +Y+ GSL +L R + + L+
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQ 122
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAG--- 944
+ +G+ YL R + H +L NIL++ + ++ D+ L +++ Q ++ + G
Sbjct: 123 ICKGMEYLGTKRYI-HRDLATRNILVENEN-RVKIGDFGLTKVLPQDKEFFKVKEPGESP 180
Query: 945 VLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ Y L SK S SDV++FGV+L EL T
Sbjct: 181 IFWYAPESLTESKF---SVASDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 10/182 (5%)
Query: 800 GMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPG 859
G + VK L+ Q+ + +V RG +GP + ++ +Y+ G
Sbjct: 40 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 99
Query: 860 SLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLN 919
L FL R L ++ L + + +G+ YL R V H +L A NIL++ + +
Sbjct: 100 CLRDFLQRHRAR----LDASRLLLYSSQICKGMEYLGSRRCV-HRDLAARNILVES-EAH 153
Query: 920 ARVADYCLHRLMTQAGTIEQILDAGV--LGYRAPELAASKKPHPSFKSDVYAFGVILLEL 977
++AD+ L +L+ + + G + + APE + S +SDV++FGV+L EL
Sbjct: 154 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF--SRQSDVWSFGVVLYEL 211
Query: 978 LT 979
T
Sbjct: 212 FT 213
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 82/160 (51%), Gaps = 28/160 (17%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEK---LILSDYISPGSLASFLYDRPGRK---GPPLTWAQR 881
+RH N+V L G EK I+++Y++ GSL +L R GR G L
Sbjct: 70 QLRHSNLVQLLGV----IVEEKGGLYIVTEYMAKGSLVDYLRSR-GRSVLGGDCL----- 119
Query: 882 LKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQIL 941
LK ++DV + YL + V H +L A N+L+ D A+V+D+ L T+ + Q
Sbjct: 120 LKFSLDVCEAMEYLEGNNFV-HRDLAARNVLV-SEDNVAKVSDFGL----TKEASSTQ-- 171
Query: 942 DAGVL--GYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
D G L + APE KK S KSDV++FG++L E+ +
Sbjct: 172 DTGKLPVKWTAPEALREKKF--STKSDVWSFGILLWEIYS 209
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 82/160 (51%), Gaps = 28/160 (17%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEK---LILSDYISPGSLASFLYDRPGRK---GPPLTWAQR 881
+RH N+V L G EK I+++Y++ GSL +L R GR G L
Sbjct: 55 QLRHSNLVQLLGV----IVEEKGGLYIVTEYMAKGSLVDYLRSR-GRSVLGGDCL----- 104
Query: 882 LKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQIL 941
LK ++DV + YL + V H +L A N+L+ D A+V+D+ L T+ + Q
Sbjct: 105 LKFSLDVCEAMEYLEGNNFV-HRDLAARNVLV-SEDNVAKVSDFGL----TKEASSTQ-- 156
Query: 942 DAGVL--GYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
D G L + APE KK S KSDV++FG++L E+ +
Sbjct: 157 DTGKLPVKWTAPEALREKKF--STKSDVWSFGILLWEIYS 194
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 10/182 (5%)
Query: 800 GMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPG 859
G + VK L+ Q+ + +V RG +GP + ++ +Y+ G
Sbjct: 39 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 98
Query: 860 SLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLN 919
L FL R L ++ L + + +G+ YL R V H +L A NIL++ + +
Sbjct: 99 CLRDFLQRHRAR----LDASRLLLYSSQICKGMEYLGSRRCV-HRDLAARNILVES-EAH 152
Query: 920 ARVADYCLHRLMTQAGTIEQILDAGV--LGYRAPELAASKKPHPSFKSDVYAFGVILLEL 977
++AD+ L +L+ + + G + + APE + S +SDV++FGV+L EL
Sbjct: 153 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF--SRQSDVWSFGVVLYEL 210
Query: 978 LT 979
T
Sbjct: 211 FT 212
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 12/199 (6%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
LG G + AT + VK ++ G + ++H +V L
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVV-- 79
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
T+ I++++++ GSL FL G K P + + + +A G+ ++ R H
Sbjct: 80 -TKEPIYIITEFMAKGSLLDFLKSDEGSKQP---LPKLIDFSAQIAEGMAFIE-QRNYIH 134
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSF 963
+L+A NIL+ L ++AD+ L R++ + + + APE A +
Sbjct: 135 RDLRAANILVSA-SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE--AINFGSFTI 191
Query: 964 KSDVYAFGVILLELLT-GR 981
KSDV++FG++L+E++T GR
Sbjct: 192 KSDVWSFGILLMEIVTYGR 210
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 775 ELSRAPAEVLGRSSHGTSYRAT-LENG----MFLTVKWLREGVA-KQRXXXXXXXXXXXN 828
EL R +VLG + GT Y+ + G + + +K L E K +
Sbjct: 16 ELKRV--KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMAS 73
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
+ HP++V L G PT +++ + G L ++++ G L L V +
Sbjct: 74 MDHPHLVRLLGVCLSPTIQ---LVTQLMPHGCLLEYVHEHKDNIGSQLL----LNWCVQI 126
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
A+G+ YL +R + H +L A N+L+ P+ + ++ D+ L RL+ + E D G +
Sbjct: 127 AKGMMYLE-ERRLVHRDLAARNVLVKSPN-HVKITDFGLARLL-EGDEKEYNADGGKMPI 183
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ L + +SDV+++GV + EL+T
Sbjct: 184 KWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 58/221 (26%), Positives = 93/221 (42%), Gaps = 39/221 (17%)
Query: 782 EVLGRSSHGTSYRATLENGMFLTVKWLREGVA-------KQRXXXXXXXXXXXNIRHPNV 834
EV+GR + G +A KW + VA +R + HPN+
Sbjct: 15 EVVGRGAFGVVCKA----------KWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNI 64
Query: 835 VGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNY 894
V L G P ++ +Y GSL + L+ P T A + + ++G+ Y
Sbjct: 65 VKLYGACLNPV----CLVMEYAEGGSLYNVLHG--AEPLPYYTAAHAMSWCLQCSQGVAY 118
Query: 895 LHF--DRAVPHGNLKATNILLDGPDLNARVADY---C-LHRLMTQAGTIEQILDAGVLGY 948
LH +A+ H +LK N+LL ++ D+ C + MT + G +
Sbjct: 119 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN--------NKGSAAW 170
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISG 989
APE+ + S K DV+++G+IL E++T R D I G
Sbjct: 171 MAPEVFEGS--NYSEKCDVFSWGIILWEVITRRKPFDEIGG 209
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 58/221 (26%), Positives = 93/221 (42%), Gaps = 39/221 (17%)
Query: 782 EVLGRSSHGTSYRATLENGMFLTVKWLREGVA-------KQRXXXXXXXXXXXNIRHPNV 834
EV+GR + G +A KW + VA +R + HPN+
Sbjct: 14 EVVGRGAFGVVCKA----------KWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNI 63
Query: 835 VGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNY 894
V L G P ++ +Y GSL + L+ P T A + + ++G+ Y
Sbjct: 64 VKLYGACLNPV----CLVMEYAEGGSLYNVLHG--AEPLPYYTAAHAMSWCLQCSQGVAY 117
Query: 895 LHF--DRAVPHGNLKATNILLDGPDLNARVADY---C-LHRLMTQAGTIEQILDAGVLGY 948
LH +A+ H +LK N+LL ++ D+ C + MT + G +
Sbjct: 118 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN--------NKGSAAW 169
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISG 989
APE+ + S K DV+++G+IL E++T R D I G
Sbjct: 170 MAPEVFEGS--NYSEKCDVFSWGIILWEVITRRKPFDEIGG 208
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 775 ELSRAPAEVLGRSSHGTSYRAT-LENG----MFLTVKWLREGVA-KQRXXXXXXXXXXXN 828
EL R +VLG + GT Y+ + G + + +K L E K +
Sbjct: 39 ELKRV--KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMAS 96
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
+ HP++V L G PT +++ + G L ++++ G L L V +
Sbjct: 97 MDHPHLVRLLGVCLSPTIQ---LVTQLMPHGCLLEYVHEHKDNIGSQLL----LNWCVQI 149
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
A+G+ YL +R + H +L A N+L+ P+ + ++ D+ L RL+ + E D G +
Sbjct: 150 AKGMMYLE-ERRLVHRDLAARNVLVKSPN-HVKITDFGLARLL-EGDEKEYNADGGKMPI 206
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ L + +SDV+++GV + EL+T
Sbjct: 207 KWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 13/180 (7%)
Query: 803 LTVKWLREG-VAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSL 861
+ +K L+ G KQR HPN++ L G +I+++ + GSL
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEXMENGSL 104
Query: 862 ASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNAR 921
SFL + T Q + + +A G+ YL D H +L A NIL++ +L +
Sbjct: 105 DSFLRKHDAQ----FTVIQLVGMLRGIASGMKYLS-DMGYVHRDLAARNILINS-NLVCK 158
Query: 922 VADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPHPSFKSDVYAFGVILLELLT 979
V+D+ L R++ G + R +PE A +K + SDV+++G++L E+++
Sbjct: 159 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA--SDVWSYGIVLWEVMS 216
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 15/184 (8%)
Query: 800 GMFLTVKWLREGVAKQ-RXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISP 858
G + VK L+EG Q R + H ++V +G + ++ +Y+
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 96
Query: 859 GSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDL 918
GSL +L + AQ L A + G+ YLH + H L A N+LLD L
Sbjct: 97 GSLRDYLPRHC------VGLAQLLLFAQQICEGMAYLHAQHYI-HRALAARNVLLDNDRL 149
Query: 919 NARVADYCLHRLMTQAGTIEQILDAG---VLGYRAPELAASKKPHPSFKSDVYAFGVILL 975
++ D+ L + + + ++ + G V Y APE K + + SDV++FGV L
Sbjct: 150 -VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKECKFY--YASDVWSFGVTLY 205
Query: 976 ELLT 979
ELLT
Sbjct: 206 ELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 15/184 (8%)
Query: 800 GMFLTVKWLREGVAKQ-RXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISP 858
G + VK L+EG Q R + H ++V +G + ++ +Y+
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 97
Query: 859 GSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDL 918
GSL +L + AQ L A + G+ YLH + H L A N+LLD L
Sbjct: 98 GSLRDYLPRHC------VGLAQLLLFAQQICEGMAYLHAQHYI-HRALAARNVLLDNDRL 150
Query: 919 NARVADYCLHRLMTQAGTIEQILDAG---VLGYRAPELAASKKPHPSFKSDVYAFGVILL 975
++ D+ L + + + ++ + G V Y APE K + + SDV++FGV L
Sbjct: 151 -VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKECKFY--YASDVWSFGVTLY 206
Query: 976 ELLT 979
ELLT
Sbjct: 207 ELLT 210
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 13/180 (7%)
Query: 803 LTVKWLREG-VAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSL 861
+ +K L+ G KQR HPN++ L G +I+++ + GSL
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEXMENGSL 133
Query: 862 ASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNAR 921
SFL + T Q + + +A G+ YL D H +L A NIL++ +L +
Sbjct: 134 DSFLRKHDAQ----FTVIQLVGMLRGIASGMKYLS-DMGYVHRDLAARNILINS-NLVCK 187
Query: 922 VADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPHPSFKSDVYAFGVILLELLT 979
V+D+ L R++ G + R +PE A +K + SDV+++G++L E+++
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA--SDVWSYGIVLWEVMS 245
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 11/196 (5%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
LG G + AT + VK ++ G + ++H +V L
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVV-- 252
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
T+ I++++++ GSL FL G K P + + + +A G+ ++ R H
Sbjct: 253 -TKEPIYIITEFMAKGSLLDFLKSDEGSKQP---LPKLIDFSAQIAEGMAFIE-QRNYIH 307
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSF 963
+L+A NIL+ L ++AD+ L R++ + + + APE A +
Sbjct: 308 RDLRAANILVSA-SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE--AINFGSFTI 364
Query: 964 KSDVYAFGVILLELLT 979
KSDV++FG++L+E++T
Sbjct: 365 KSDVWSFGILLMEIVT 380
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
+++H N+V +G + + ++ +++ GSL +L R + + L+
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER----IDHIKLLQYTSQ 125
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAG--- 944
+ +G+ YL R + H +L NIL++ + ++ D+ L +++ Q ++ + G
Sbjct: 126 ICKGMEYLGTKRYI-HRDLATRNILVENEN-RVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 945 VLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ Y L SK S SDV++FGV+L EL T
Sbjct: 184 IFWYAPESLTESKF---SVASDVWSFGVVLYELFT 215
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 82/160 (51%), Gaps = 28/160 (17%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEK---LILSDYISPGSLASFLYDRPGRK---GPPLTWAQR 881
+RH N+V L G EK I+++Y++ GSL +L R GR G L
Sbjct: 242 QLRHSNLVQLLGV----IVEEKGGLYIVTEYMAKGSLVDYLRSR-GRSVLGGDCL----- 291
Query: 882 LKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQIL 941
LK ++DV + YL + V H +L A N+L+ D A+V+D+ L T+ + Q
Sbjct: 292 LKFSLDVCEAMEYLEGNNFV-HRDLAARNVLV-SEDNVAKVSDFGL----TKEASSTQ-- 343
Query: 942 DAGVL--GYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
D G L + APE KK S KSDV++FG++L E+ +
Sbjct: 344 DTGKLPVKWTAPEALREKKF--STKSDVWSFGILLWEIYS 381
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 831 HPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFL--YDRPGRKGPPLTWAQRLKIAVDV 888
HPN+V L + T+ ++ +Y S G + +L + R K + Q +
Sbjct: 72 HPNIVKL--FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ-------I 122
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ Y H + + H +LKA N+LLD D+N ++AD+ T +++ G Y
Sbjct: 123 VSAVQYCH-QKFIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTFGNKLDEF--CGSPPY 178
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
APEL KK + + DV++ GVIL L++G
Sbjct: 179 AAPELFQGKK-YDGPEVDVWSLGVILYTLVSG 209
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
I+HPN+V L G + I++++++ G+L +L + ++ ++ L +A +
Sbjct: 64 IKHPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQE---VSAVVLLYMATQI 118
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ + YL + H +L A N L+ G + +VAD+ L RLMT + +
Sbjct: 119 SSAMEYLE-KKNFIHRDLAARNCLV-GENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 176
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT 979
APE A K S KSDV+AFGV+L E+ T
Sbjct: 177 TAPESLAYNKF--SIKSDVWAFGVLLWEIAT 205
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 12/167 (7%)
Query: 815 QRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGP 874
QR ++ H +VVG G++ ++ + SL R P
Sbjct: 82 QREKMSMEISIHRSLAHQHVVGFHGFFED--NDFVFVVLELCRRRSLLELHKRRKALTEP 139
Query: 875 PLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQA 934
+ R + G YLH +R + H +LK N+ L+ DL ++ D+ L +
Sbjct: 140 EARYYLR-----QIVLGCQYLHRNRVI-HRDLKLGNLFLNE-DLEVKIGDFGLATKVEYD 192
Query: 935 GTIEQILDAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
G +++L G Y APE+ SKK H SF+ DV++ G I+ LL G+
Sbjct: 193 GERKKVL-CGTPNYIAPEVL-SKKGH-SFEVDVWSIGCIMYTLLVGK 236
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 14/152 (9%)
Query: 831 HPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVAR 890
H +++ +G + ++ +Y+ GSL +L P + AQ L A +
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHS---IGLAQLLLFAQQICE 128
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAG---VLG 947
G+ YLH + H NL A N+LLD L ++ D+ L + + + ++ + G V
Sbjct: 129 GMAYLHAQHYI-HRNLAARNVLLDNDRL-VKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 186
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
Y APE K + + SDV++FGV L ELLT
Sbjct: 187 Y-APECLKEYKFY--YASDVWSFGVTLYELLT 215
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 12/167 (7%)
Query: 815 QRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGP 874
QR ++ H +VVG G++ ++ + SL R P
Sbjct: 84 QREKMSMEISIHRSLAHQHVVGFHGFFED--NDFVFVVLELCRRRSLLELHKRRKALTEP 141
Query: 875 PLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQA 934
+ R + G YLH +R + H +LK N+ L+ DL ++ D+ L +
Sbjct: 142 EARYYLR-----QIVLGCQYLHRNRVI-HRDLKLGNLFLNE-DLEVKIGDFGLATKVEYD 194
Query: 935 GTIEQILDAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
G +++L G Y APE+ SKK H SF+ DV++ G I+ LL G+
Sbjct: 195 GERKKVL-CGTPNYIAPEVL-SKKGH-SFEVDVWSIGCIMYTLLVGK 238
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
I+HPN+V L G + I++++++ G+L +L + ++ ++ L +A +
Sbjct: 66 IKHPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQE---VSAVVLLYMATQI 120
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ + YL + H +L A N L+ G + +VAD+ L RLMT + +
Sbjct: 121 SSAMEYLE-KKNFIHRDLAARNCLV-GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT 979
APE A K S KSDV+AFGV+L E+ T
Sbjct: 179 TAPESLAYNKF--SIKSDVWAFGVLLWEIAT 207
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 14/152 (9%)
Query: 831 HPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVAR 890
H +++ +G + ++ +Y+ GSL +L P + AQ L A +
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHS---IGLAQLLLFAQQICE 128
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAG---VLG 947
G+ YLH + H NL A N+LLD L ++ D+ L + + + ++ + G V
Sbjct: 129 GMAYLHSQHYI-HRNLAARNVLLDNDRL-VKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 186
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
Y APE K + + SDV++FGV L ELLT
Sbjct: 187 Y-APECLKEYKFY--YASDVWSFGVTLYELLT 215
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
I+HPN+V L G + I++++++ G+L +L + ++ ++ L +A +
Sbjct: 66 IKHPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQE---VSAVVLLYMATQI 120
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ + YL + H +L A N L+ G + +VAD+ L RLMT + +
Sbjct: 121 SSAMEYLE-KKNFIHRDLAARNCLV-GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT 979
APE A K S KSDV+AFGV+L E+ T
Sbjct: 179 TAPESLAYNKF--SIKSDVWAFGVLLWEIAT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
I+HPN+V L G + I++++++ G+L +L + ++ ++ L +A +
Sbjct: 71 IKHPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQE---VSAVVLLYMATQI 125
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ + YL + H +L A N L+ G + +VAD+ L RLMT + +
Sbjct: 126 SSAMEYLE-KKNFIHRDLAARNCLV-GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT 979
APE A K S KSDV+AFGV+L E+ T
Sbjct: 184 TAPESLAYNKF--SIKSDVWAFGVLLWEIAT 212
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 83/160 (51%), Gaps = 28/160 (17%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEK---LILSDYISPGSLASFLYDRPGRK---GPPLTWAQR 881
+RH N+V L G EK I+++Y++ GSL +L R GR G L
Sbjct: 61 QLRHSNLVQLLGV----IVEEKGGLYIVTEYMAKGSLVDYLRSR-GRSVLGGDCL----- 110
Query: 882 LKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQIL 941
LK ++DV + YL + V H +L A N+L+ D A+V+D+ L T+ + Q
Sbjct: 111 LKFSLDVCEAMEYLEGNNFV-HRDLAARNVLV-SEDNVAKVSDFGL----TKEASSTQ-- 162
Query: 942 DAGVL--GYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
D G L + APE A ++ S KSDV++FG++L E+ +
Sbjct: 163 DTGKLPVKWTAPE--ALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 12/157 (7%)
Query: 831 HPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVAR 890
HP +VGL + T+ + +Y++ G L ++ ++ P A+ + +A
Sbjct: 112 HPFLVGLHSCF--QTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLA- 165
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRA 950
LNYLH +R + + +LK N+LLD + + ++ DY + + + G G Y A
Sbjct: 166 -LNYLH-ERGIIYRDLKLDNVLLDS-EGHIKLTDYGMCKEGLRPGDTTSTF-CGTPNYIA 221
Query: 951 PELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVI 987
PE+ + F D +A GV++ E++ GR D++
Sbjct: 222 PEILRGEDY--GFSVDWWALGVLMFEMMAGRSPFDIV 256
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 28/152 (18%)
Query: 851 ILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFD---------RAV 901
+++ + GSL+ FL K ++W + IA +ARGL YLH D A+
Sbjct: 99 LITAFHEKGSLSDFL------KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAI 152
Query: 902 PHGNLKATNILLDGPDLNARVADYCLHRLMTQAG-----TIEQILDAGVLGYRAPEL--- 953
H ++K+ N+LL +L A +AD+ L L +AG T Q+ G Y APE+
Sbjct: 153 SHRDIKSKNVLLKN-NLTACIADFGL-ALKFEAGKSAGDTHGQV---GTRRYMAPEVLEG 207
Query: 954 AASKKPHPSFKSDVYAFGVILLELLTGRCAGD 985
A + + + D+YA G++L EL + A D
Sbjct: 208 AINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
I+HPN+V L G + I++++++ G+L +L + ++ + L +A +
Sbjct: 71 IKHPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQI 125
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ + YL + H +L A N L+ G + +VAD+ L RLMT + +
Sbjct: 126 SSAMEYLE-KKNFIHRDLAARNCLV-GENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 183
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT 979
APE A K S KSDV+AFGV+L E+ T
Sbjct: 184 TAPESLAYNKF--SIKSDVWAFGVLLWEIAT 212
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 883 KIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILD 942
KI + + LN+L + + H ++K +NILLD N ++ D+ + + +I + D
Sbjct: 129 KITLATVKALNHLKENLKIIHRDIKPSNILLDRSG-NIKLCDFGISGQLVD--SIAKTRD 185
Query: 943 AGVLGYRAPEL---AASKKPHPSFKSDVYAFGVILLELLTGR 981
AG Y APE +AS++ + +SDV++ G+ L EL TGR
Sbjct: 186 AGCRPYMAPERIDPSASRQGY-DVRSDVWSLGITLYELATGR 226
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
I+HPN+V L G + I++++++ G+L +L + ++ ++ L +A +
Sbjct: 64 IKHPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQE---VSAVVLLYMATQI 118
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ + YL + H +L A N L+ G + +VAD+ L RLMT + +
Sbjct: 119 SSAMEYLE-KKNFIHRDLAARNCLV-GENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKW 176
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT 979
APE A K S KSDV+AFGV+L E+ T
Sbjct: 177 TAPESLAYNKF--SIKSDVWAFGVLLWEIAT 205
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 22/149 (14%)
Query: 848 EKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFD--------- 898
E +++ + GSL +L KG +TW + +A ++RGL+YLH D
Sbjct: 87 ELWLITAFHDKGSLTDYL------KGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGH 140
Query: 899 -RAVPHGNLKATNILLDGPDLNARVADYCLH-RLMTQAGTIEQILDAGVLGYRAPEL--- 953
++ H + K+ N+LL DL A +AD+ L R + G Y APE+
Sbjct: 141 KPSIAHRDFKSKNVLLKS-DLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEG 199
Query: 954 AASKKPHPSFKSDVYAFGVILLELLTGRC 982
A + + + D+YA G++L EL++ RC
Sbjct: 200 AINFQRDAFLRIDMYAMGLVLWELVS-RC 227
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
+ HPN+V L + T+ ++ +Y S G + +L GR A+ +I V
Sbjct: 70 LNHPNIVKL--FEVIETEKTLYLVMEYASGGEVFDYLVAH-GRMKEKEARAKFRQIVSAV 126
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
Y H + + H +LKA N+LLD D+N ++AD+ T ++ G Y
Sbjct: 127 ----QYCH-QKFIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTFGNKLDAF--CGAPPY 178
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
APEL KK + + DV++ GVIL L++G
Sbjct: 179 AAPELFQGKK-YDGPEVDVWSLGVILYTLVSG 209
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
I+HPN+V L G + I++++++ G+L +L + ++ + L +A +
Sbjct: 71 IKHPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQI 125
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ + YL + H +L A N L+ G + +VAD+ L RLMT + +
Sbjct: 126 SSAMEYLE-KKNFIHRDLAARNCLV-GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT 979
APE A K S KSDV+AFGV+L E+ T
Sbjct: 184 TAPESLAYNKF--SIKSDVWAFGVLLWEIAT 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
I+HPN+V L G + I++++++ G+L +L + ++ + L +A +
Sbjct: 79 IKHPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQI 133
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ + YL + H +L A N L+ G + +VAD+ L RLMT + +
Sbjct: 134 SSAMEYLE-KKNFIHRDLAARNCLV-GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 191
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT 979
APE A K S KSDV+AFGV+L E+ T
Sbjct: 192 TAPESLAYNKF--SIKSDVWAFGVLLWEIAT 220
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
I+HPN+V L G + I++++++ G+L +L + ++ + L +A +
Sbjct: 71 IKHPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQI 125
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ + YL + H +L A N L+ G + +VAD+ L RLMT + +
Sbjct: 126 SSAMEYLE-KKNFIHRDLAARNCLV-GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT 979
APE A K S KSDV+AFGV+L E+ T
Sbjct: 184 TAPESLAYNKF--SIKSDVWAFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
I+HPN+V L G + I++++++ G+L +L + ++ + L +A +
Sbjct: 66 IKHPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQI 120
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ + YL + H +L A N L+ G + +VAD+ L RLMT + +
Sbjct: 121 SSAMEYLE-KKNFIHRDLAARNCLV-GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT 979
APE A K S KSDV+AFGV+L E+ T
Sbjct: 179 TAPESLAYNKF--SIKSDVWAFGVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
I+HPN+V L G + I++++++ G+L +L + ++ + L +A +
Sbjct: 70 IKHPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQI 124
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ + YL + H +L A N L+ G + +VAD+ L RLMT + +
Sbjct: 125 SSAMEYLE-KKNFIHRDLAARNCLV-GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 182
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT 979
APE A K S KSDV+AFGV+L E+ T
Sbjct: 183 TAPESLAYNKF--SIKSDVWAFGVLLWEIAT 211
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
I+HPN+V L G + I++++++ G+L +L + ++ + L +A +
Sbjct: 66 IKHPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQI 120
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ + YL + H +L A N L+ G + +VAD+ L RLMT + +
Sbjct: 121 SSAMEYLE-KKNFIHRDLAARNCLV-GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT 979
APE A K S KSDV+AFGV+L E+ T
Sbjct: 179 TAPESLAYNKF--SIKSDVWAFGVLLWEIAT 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
I+HPN+V L G + I++++++ G+L +L + ++ + L +A +
Sbjct: 68 IKHPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQI 122
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ + YL + H +L A N L+ G + +VAD+ L RLMT + +
Sbjct: 123 SSAMEYLE-KKNFIHRDLAARNCLV-GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 180
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT 979
APE A K S KSDV+AFGV+L E+ T
Sbjct: 181 TAPESLAYNKF--SIKSDVWAFGVLLWEIAT 209
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
I+HPN+V L G + I++++++ G+L +L + ++ + L +A +
Sbjct: 68 IKHPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQI 122
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ + YL + H +L A N L+ G + +VAD+ L RLMT + +
Sbjct: 123 SSAMEYLE-KKNFIHRDLAARNCLV-GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 180
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT 979
APE A K S KSDV+AFGV+L E+ T
Sbjct: 181 TAPESLAYNKF--SIKSDVWAFGVLLWEIAT 209
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 16/154 (10%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFL--YDRPGRKGPPLTWAQRLKIAV 886
+ HPN+V L + T+ ++ +Y S G + +L + R K + Q
Sbjct: 70 LNHPNIVKL--FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ------ 121
Query: 887 DVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVL 946
+ + Y H + + H +LKA N+LLD D+N ++AD+ T ++ G
Sbjct: 122 -IVSAVQYCH-QKFIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTFGNKLDTF--CGSP 176
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
Y APEL KK + + DV++ GVIL L++G
Sbjct: 177 PYAAPELFQGKK-YDGPEVDVWSLGVILYTLVSG 209
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 12/157 (7%)
Query: 831 HPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVAR 890
HP +VGL + T+ + +Y++ G L ++ ++ P A+ + +A
Sbjct: 80 HPFLVGLHSCF--QTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLA- 133
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRA 950
LNYLH +R + + +LK N+LLD + + ++ DY + + + G G Y A
Sbjct: 134 -LNYLH-ERGIIYRDLKLDNVLLDS-EGHIKLTDYGMCKEGLRPGDTTSXF-CGTPNYIA 189
Query: 951 PELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVI 987
PE+ + F D +A GV++ E++ GR D++
Sbjct: 190 PEILRGEDY--GFSVDWWALGVLMFEMMAGRSPFDIV 224
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 12/157 (7%)
Query: 831 HPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVAR 890
HP +VGL + T+ + +Y++ G L ++ ++ P A+ + +A
Sbjct: 65 HPFLVGLHSCF--QTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLA- 118
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRA 950
LNYLH +R + + +LK N+LLD + + ++ DY + + + G G Y A
Sbjct: 119 -LNYLH-ERGIIYRDLKLDNVLLDS-EGHIKLTDYGMCKEGLRPGDTTSXF-CGTPNYIA 174
Query: 951 PELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVI 987
PE+ + F D +A GV++ E++ GR D++
Sbjct: 175 PEILRGEDY--GFSVDWWALGVLMFEMMAGRSPFDIV 209
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 19/218 (8%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
LG G + N + VK L+ G + ++H +V L Y
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMK-TLQHDKLVRL---YAV 76
Query: 844 PTQHEKL-ILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVP 902
T+ E + I+++Y++ GSL FL G K + + + + +A G+ Y+ +
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFLKSDEGGK---VLLPKLIDFSAQIAEGMAYIERKNYI- 132
Query: 903 HGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPS 962
H +L+A N+L+ L ++AD+ L R++ + + + APE A +
Sbjct: 133 HRDLRAANVLVS-ESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE--AINFGCFT 189
Query: 963 FKSDVYAFGVILLELLT-------GRCAGDVISGEGAG 993
KSDV++FG++L E++T GR DV++ G
Sbjct: 190 IKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQG 227
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 16/154 (10%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFL--YDRPGRKGPPLTWAQRLKIAV 886
+ HPN+V L + T+ ++ +Y S G + +L + R K + Q
Sbjct: 70 LNHPNIVKL--FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ------ 121
Query: 887 DVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVL 946
+ + Y H + + H +LKA N+LLD D+N ++AD+ T ++ G
Sbjct: 122 -IVSAVQYCH-QKFIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTFGNKLDTF--CGSP 176
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
Y APEL KK + + DV++ GVIL L++G
Sbjct: 177 PYAAPELFQGKK-YDGPEVDVWSLGVILYTLVSG 209
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
I+HPN+V L G + I+++Y+ G+L +L + + +T L +A +
Sbjct: 85 IKHPNLVQLLGVC--TLEPPFYIVTEYMPYGNLLDYLRECNREE---VTAVVLLYMATQI 139
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ + YL + H +L A N L+ G + +VAD+ L RLMT + +
Sbjct: 140 SSAMEYLE-KKNFIHRDLAARNCLV-GENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKW 197
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT 979
APE A S KSDV+AFGV+L E+ T
Sbjct: 198 TAPESLAYNTF--SIKSDVWAFGVLLWEIAT 226
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 16/152 (10%)
Query: 831 HPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFL--YDRPGRKGPPLTWAQRLKIAVDV 888
HPN+V L + T+ ++ +Y S G + +L + R K + Q +
Sbjct: 72 HPNIVKL--FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ-------I 122
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ Y H + + H +LKA N+LLD D+N ++AD+ T ++ G Y
Sbjct: 123 VSAVQYCH-QKFIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTFGNKLDTF--CGSPPY 178
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
APEL KK + + DV++ GVIL L++G
Sbjct: 179 AAPELFQGKK-YDGPEVDVWSLGVILYTLVSG 209
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 12/157 (7%)
Query: 831 HPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVAR 890
HP +VGL + T+ + +Y++ G L ++ ++ P A+ + +A
Sbjct: 69 HPFLVGLHSCF--QTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLA- 122
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRA 950
LNYLH +R + + +LK N+LLD + + ++ DY + + + G G Y A
Sbjct: 123 -LNYLH-ERGIIYRDLKLDNVLLDS-EGHIKLTDYGMCKEGLRPGDTTSXF-CGTPNYIA 178
Query: 951 PELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVI 987
PE+ + F D +A GV++ E++ GR D++
Sbjct: 179 PEILRGEDY--GFSVDWWALGVLMFEMMAGRSPFDIV 213
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 50.1 bits (118), Expect = 7e-06, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
I+HPN+V L G + I+ ++++ G+L +L + ++ ++ L +A +
Sbjct: 64 IKHPNLVQLLGVC--TREPPFYIIIEFMTYGNLLDYLRECNRQE---VSAVVLLYMATQI 118
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ + YL + H +L A N L+ G + +VAD+ L RLMT + +
Sbjct: 119 SSAMEYLE-KKNFIHRDLAARNCLV-GENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 176
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT 979
APE A K S KSDV+AFGV+L E+ T
Sbjct: 177 TAPESLAYNKF--SIKSDVWAFGVLLWEIAT 205
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 50.1 bits (118), Expect = 7e-06, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 12/167 (7%)
Query: 815 QRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGP 874
QR ++ H +VVG G++ ++ + SL R P
Sbjct: 58 QREKMSMEISIHRSLAHQHVVGFHGFF--EDNDFVFVVLELCRRRSLLELHKRRKALTEP 115
Query: 875 PLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQA 934
+ R + G YLH +R + H +LK N+ L+ DL ++ D+ L +
Sbjct: 116 EARYYLR-----QIVLGCQYLHRNRVI-HRDLKLGNLFLN-EDLEVKIGDFGLATKVEYD 168
Query: 935 GTIEQILDAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
G +++L G Y APE+ SKK H SF+ DV++ G I+ LL G+
Sbjct: 169 GERKKVL-CGTPNYIAPEVL-SKKGH-SFEVDVWSIGCIMYTLLVGK 212
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 815 QRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGP 874
QR ++ H +VVG G++ ++ + SL R P
Sbjct: 60 QREKMSMEISIHRSLAHQHVVGFHGFFED--NDFVFVVLELCRRRSLLELHKRRKALTEP 117
Query: 875 PLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQA 934
+ R + G YLH +R + H +LK N+ L+ DL ++ D+ L +
Sbjct: 118 EARYYLR-----QIVLGCQYLHRNRVI-HRDLKLGNLFLNE-DLEVKIGDFGLATKVEYD 170
Query: 935 GTIEQILDAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
G ++ L G Y APE+ SKK H SF+ DV++ G I+ LL G+
Sbjct: 171 GERKKTL-CGTPNYIAPEVL-SKKGH-SFEVDVWSIGCIMYTLLVGK 214
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
+ HPN+V L + T+ ++ +Y S G + +L GR A+ +I V
Sbjct: 70 LNHPNIVKL--FEVIETEKTLYLVXEYASGGEVFDYLVAH-GRXKEKEARAKFRQIVSAV 126
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
Y H + + H +LKA N+LLD D N ++AD+ T ++ G Y
Sbjct: 127 ----QYCH-QKFIVHRDLKAENLLLDA-DXNIKIADFGFSNEFTFGNKLDAF--CGAPPY 178
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
APEL KK + + DV++ GVIL L++G
Sbjct: 179 AAPELFQGKK-YDGPEVDVWSLGVILYTLVSG 209
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 815 QRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGP 874
QR ++ H +VVG G++ ++ + SL R P
Sbjct: 64 QREKMSMEISIHRSLAHQHVVGFHGFFED--NDFVFVVLELCRRRSLLELHKRRKALTEP 121
Query: 875 PLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQA 934
+ R + G YLH +R + H +LK N+ L+ DL ++ D+ L +
Sbjct: 122 EARYYLR-----QIVLGCQYLHRNRVI-HRDLKLGNLFLNE-DLEVKIGDFGLATKVEYD 174
Query: 935 GTIEQILDAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
G ++ L G Y APE+ SKK H SF+ DV++ G I+ LL G+
Sbjct: 175 GERKKTL-CGTPNYIAPEVL-SKKGH-SFEVDVWSIGCIMYTLLVGK 218
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
I+HPN+V L G + I++++++ G+L +L + ++ + L +A +
Sbjct: 67 IKHPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQI 121
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ + YL + H +L A N L+ G + +VAD+ L RLMT + +
Sbjct: 122 SSAMEYLE-KKNFIHRDLAARNCLV-GENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW 179
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT 979
APE A K S KSDV+AFGV+L E+ T
Sbjct: 180 TAPESLAYNKF--SIKSDVWAFGVLLWEIAT 208
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
I+HPN+V L G + I++++++ G+L +L + ++ + L +A +
Sbjct: 68 IKHPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQI 122
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ + YL + H +L A N L+ G + +VAD+ L RLMT + +
Sbjct: 123 SSAMEYLE-KKNFIHRDLAARNCLV-GENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW 180
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT 979
APE A K S KSDV+AFGV+L E+ T
Sbjct: 181 TAPESLAYNKF--SIKSDVWAFGVLLWEIAT 209
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 815 QRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGP 874
QR ++ H +VVG G++ ++ + SL R P
Sbjct: 60 QREKMSMEISIHRSLAHQHVVGFHGFFED--NDFVFVVLELCRRRSLLELHKRRKALTEP 117
Query: 875 PLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQA 934
+ R + G YLH +R + H +LK N+ L+ DL ++ D+ L +
Sbjct: 118 EARYYLR-----QIVLGCQYLHRNRVI-HRDLKLGNLFLNE-DLEVKIGDFGLATKVEYD 170
Query: 935 GTIEQILDAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
G ++ L G Y APE+ SKK H SF+ DV++ G I+ LL G+
Sbjct: 171 GERKKTL-CGTPNYIAPEVL-SKKGH-SFEVDVWSIGCIMYTLLVGK 214
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 31/166 (18%)
Query: 831 HPNVVGL------RGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--------- 875
HPN++ L RGY + + +Y G+L FL + P
Sbjct: 82 HPNIINLLGACEHRGYLY--------LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTA 133
Query: 876 --LTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQ 933
L+ Q L A DVARG++YL + + H NL A NIL+ G + A++AD+ L R Q
Sbjct: 134 STLSSQQLLHFAADVARGMDYLSQKQFI-HRNLAARNILV-GENYVAKIADFGLSR--GQ 189
Query: 934 AGTIEQILDAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+++ + G L R + + + SDV+++GV+L E+++
Sbjct: 190 EVYVKKTM--GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 13/204 (6%)
Query: 782 EVLGRSSHGTSYRATLENG----MFLTVKWL-REGVAKQRXXXXXXXXXXXNIRHPNVVG 836
EV+GR G Y TL + + VK L R + + HPNV+
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 837 LRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLH 896
L G ++ L++ Y+ G L +F+ R P T + + VA+G+ YL
Sbjct: 114 LLGICLR-SEGSPLVVLPYMKHGDLRNFI--RNETHNP--TVKDLIGFGLQVAKGMKYLA 168
Query: 897 FDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV-LGYRAPELAA 955
+ V H +L A N +LD +VAD+ L R M G L + L +
Sbjct: 169 SKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 226
Query: 956 SKKPHPSFKSDVYAFGVILLELLT 979
+ + KSDV++FGV+L EL+T
Sbjct: 227 LQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 108/248 (43%), Gaps = 47/248 (18%)
Query: 830 RHPNVVGLRGYYWGPTQHEKL-ILSDYISPGSLASFLYDRPGRKGPPLTWAQR------- 881
+H N++ L G TQ L ++ +Y S G+L +L R+ P L ++
Sbjct: 133 KHKNIINLLG---ACTQDGPLYVIVEYASKGNLREYL---QARRPPGLEYSYNPSHNPEE 186
Query: 882 -------LKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQA 934
+ A VARG+ YL + + H +L A N+L+ ++ ++AD+ L R +
Sbjct: 187 QLSSKDLVSCAYQVARGMEYLASKKCI-HRDLAARNVLVTEDNV-MKIADFGLARDIHHI 244
Query: 935 GTIEQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISGEGAG 993
++ + + + + APE + + +SDV++FGV+L E+ T + G
Sbjct: 245 DYYKKTTNGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEIFT------LGGSPYPG 296
Query: 994 VDLTDWMQLKVAEGHGSDCFDAAVMPEMVNPAAEKGMKEVLGIALRCIRSV-SERPGIKT 1052
V + + +L + EGH D E+ + C +V S+RP K
Sbjct: 297 VPVEELFKL-LKEGHRMD-------------KPSNCTNELYMMMRDCWHAVPSQRPTFKQ 342
Query: 1053 IYEDLSSI 1060
+ EDL I
Sbjct: 343 LVEDLDRI 350
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
I+HPN+V L G + I+ ++++ G+L +L + ++ ++ L +A +
Sbjct: 66 IKHPNLVQLLGVC--TREPPFYIIIEFMTYGNLLDYLRECNRQE---VSAVVLLYMATQI 120
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ + YL + H +L A N L+ G + +VAD+ L RLMT + +
Sbjct: 121 SSAMEYLE-KKNFIHRDLAARNCLV-GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT 979
APE A K S KSDV+AFGV+L E+ T
Sbjct: 179 TAPESLAYNKF--SIKSDVWAFGVLLWEIAT 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
I+HPN+V L G + I+ ++++ G+L +L + ++ ++ L +A +
Sbjct: 66 IKHPNLVQLLGVC--TREPPFYIIIEFMTYGNLLDYLRECNRQE---VSAVVLLYMATQI 120
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ + YL + H +L A N L+ G + +VAD+ L RLMT + +
Sbjct: 121 SSAMEYLE-KKNFIHRDLAARNCLV-GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT 979
APE A K S KSDV+AFGV+L E+ T
Sbjct: 179 TAPESLAYNKF--SIKSDVWAFGVLLWEIAT 207
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 49.7 bits (117), Expect = 1e-05, Method: Composition-based stats.
Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 13/180 (7%)
Query: 803 LTVKWLREG-VAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSL 861
+ +K L+ G KQR HPNVV L G +I+ +++ G+L
Sbjct: 74 VAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVV--TRGKPVMIVIEFMENGAL 131
Query: 862 ASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNAR 921
+FL G+ T Q + + +A G+ YL D H +L A NIL++ +L +
Sbjct: 132 DAFLRKHDGQ----FTVIQLVGMLRGIAAGMRYLA-DMGYVHRDLAARNILVNS-NLVCK 185
Query: 922 VADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPHPSFKSDVYAFGVILLELLT 979
V+D+ L R++ G + R APE +K + SDV+++G+++ E+++
Sbjct: 186 VSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSA--SDVWSYGIVMWEVMS 243
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
I+HPN+V L G + I+ ++++ G+L +L + ++ + L +A +
Sbjct: 67 IKHPNLVQLLGVC--TREPPFYIIIEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQI 121
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ + YL + H +L A N L+ G + +VAD+ L RLMT + +
Sbjct: 122 SSAMEYLE-KKNFIHRDLAARNCLV-GENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 179
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT 979
APE A K S KSDV+AFGV+L E+ T
Sbjct: 180 TAPESLAYNKF--SIKSDVWAFGVLLWEIAT 208
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 14/158 (8%)
Query: 831 HPNVVGLRGYYWGPTQHEKL-ILSDYISPGSLASFLYD---RPGRKGPPLTWAQRLKIAV 886
HPN+V YY ++L ++ +S GS+ + + K L + I
Sbjct: 67 HPNIVS---YYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 123
Query: 887 DVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQ----ILD 942
+V GL YLH + + H ++KA NILL G D + ++AD+ + + G I +
Sbjct: 124 EVLEGLEYLHKNGQI-HRDVKAGNILL-GEDGSVQIADFGVSAFLATGGDITRNKVRKTF 181
Query: 943 AGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
G + APE+ + + FK+D+++FG+ +EL TG
Sbjct: 182 VGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATG 218
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 14/158 (8%)
Query: 831 HPNVVGLRGYYWGPTQHEKL-ILSDYISPGSLASFLYD---RPGRKGPPLTWAQRLKIAV 886
HPN+V YY ++L ++ +S GS+ + + K L + I
Sbjct: 72 HPNIVS---YYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 128
Query: 887 DVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQ----ILD 942
+V GL YLH + + H ++KA NILL G D + ++AD+ + + G I +
Sbjct: 129 EVLEGLEYLHKNGQI-HRDVKAGNILL-GEDGSVQIADFGVSAFLATGGDITRNKVRKTF 186
Query: 943 AGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
G + APE+ + + FK+D+++FG+ +EL TG
Sbjct: 187 VGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATG 223
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 13/204 (6%)
Query: 782 EVLGRSSHGTSYRATLENG----MFLTVKWL-REGVAKQRXXXXXXXXXXXNIRHPNVVG 836
EV+GR G Y TL + + VK L R + + HPNV+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 837 LRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLH 896
L G ++ L++ Y+ G L +F+ R P T + + VA+G+ YL
Sbjct: 95 LLGICLR-SEGSPLVVLPYMKHGDLRNFI--RNETHNP--TVKDLIGFGLQVAKGMKYLA 149
Query: 897 FDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV-LGYRAPELAA 955
+ V H +L A N +LD +VAD+ L R M G L + L +
Sbjct: 150 SKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 956 SKKPHPSFKSDVYAFGVILLELLT 979
+ + KSDV++FGV+L EL+T
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 17/153 (11%)
Query: 831 HPNVVGL-RGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVA 889
HPN+V L +Y+ ++ IL ++ + G++ + + + PLT +Q +
Sbjct: 66 HPNIVKLLDAFYY---ENNLWILIEFCAGGAVDAVMLELE----RPLTESQIQVVCKQTL 118
Query: 890 RGLNYLHFDRAVPHGNLKATNIL--LDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
LNYLH D + H +LKA NIL LDG + ++AD+ + T+ + G
Sbjct: 119 DALNYLH-DNKIIHRDLKAGNILFTLDG---DIKLADFGVSAKNTRTXIQRRDSFIGTPY 174
Query: 948 YRAPE--LAASKKPHP-SFKSDVYAFGVILLEL 977
+ APE + + K P +K+DV++ G+ L+E+
Sbjct: 175 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 13/204 (6%)
Query: 782 EVLGRSSHGTSYRATLENG----MFLTVKWL-REGVAKQRXXXXXXXXXXXNIRHPNVVG 836
EV+GR G Y TL + + VK L R + + HPNV+
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 837 LRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLH 896
L G ++ L++ Y+ G L +F+ R P T + + VA+G+ YL
Sbjct: 115 LLGICLR-SEGSPLVVLPYMKHGDLRNFI--RNETHNP--TVKDLIGFGLQVAKGMKYLA 169
Query: 897 FDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV-LGYRAPELAA 955
+ V H +L A N +LD +VAD+ L R M G L + L +
Sbjct: 170 SKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 227
Query: 956 SKKPHPSFKSDVYAFGVILLELLT 979
+ + KSDV++FGV+L EL+T
Sbjct: 228 LQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
I+HPN+V L G + I+ ++++ G+L +L + ++ + L +A +
Sbjct: 71 IKHPNLVQLLGVC--TREPPFYIIIEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQI 125
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ + YL + H +L A N L+ G + +VAD+ L RLMT + +
Sbjct: 126 SSAMEYLE-KKNFIHRDLAARNCLV-GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT 979
APE A K S KSDV+AFGV+L E+ T
Sbjct: 184 TAPESLAYNKF--SIKSDVWAFGVLLWEIAT 212
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 21/196 (10%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWG 843
LG G + AT + VK ++ G + ++H +V L
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVV-- 246
Query: 844 PTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPH 903
T+ I++++++ GSL FL G K P + + + +A G+ ++ R H
Sbjct: 247 -TKEPIYIITEFMAKGSLLDFLKSDEGSKQP---LPKLIDFSAQIAEGMAFIE-QRNYIH 301
Query: 904 GNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSF 963
+L+A NIL+ L ++AD+ L R+ + + + APE A +
Sbjct: 302 RDLRAANILVSA-SLVCKIADFGLARVGAKFP----------IKWTAPE--AINFGSFTI 348
Query: 964 KSDVYAFGVILLELLT 979
KSDV++FG++L+E++T
Sbjct: 349 KSDVWSFGILLMEIVT 364
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 13/204 (6%)
Query: 782 EVLGRSSHGTSYRATLENG----MFLTVKWL-REGVAKQRXXXXXXXXXXXNIRHPNVVG 836
EV+GR G Y TL + + VK L R + + HPNV+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 837 LRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLH 896
L G ++ L++ Y+ G L +F+ R P T + + VA+G+ YL
Sbjct: 96 LLGICLR-SEGSPLVVLPYMKHGDLRNFI--RNETHNP--TVKDLIGFGLQVAKGMKYLA 150
Query: 897 FDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV-LGYRAPELAA 955
+ V H +L A N +LD +VAD+ L R M G L + L +
Sbjct: 151 SKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 956 SKKPHPSFKSDVYAFGVILLELLT 979
+ + KSDV++FGV+L EL+T
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 13/204 (6%)
Query: 782 EVLGRSSHGTSYRATLENG----MFLTVKWL-REGVAKQRXXXXXXXXXXXNIRHPNVVG 836
EV+GR G Y TL + + VK L R + + HPNV+
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 837 LRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLH 896
L G ++ L++ Y+ G L +F+ R P T + + VA+G+ YL
Sbjct: 94 LLGICLR-SEGSPLVVLPYMKHGDLRNFI--RNETHNP--TVKDLIGFGLQVAKGMKYLA 148
Query: 897 FDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV-LGYRAPELAA 955
+ V H +L A N +LD +VAD+ L R M G L + L +
Sbjct: 149 SKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 956 SKKPHPSFKSDVYAFGVILLELLT 979
+ + KSDV++FGV+L EL+T
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 12/152 (7%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
+ HPN+V L + T+ ++ +Y S G + +L K R +
Sbjct: 63 LNHPNIVKL--FEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-----QI 115
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ Y H + + H +LKA N+LLD D+N ++AD+ T ++ G Y
Sbjct: 116 VSAVQYCH-QKFIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTFGNKLDTF--CGSPPY 171
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
APEL KK + + DV++ GVIL L++G
Sbjct: 172 AAPELFQGKK-YDGPEVDVWSLGVILYTLVSG 202
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 84/197 (42%), Gaps = 28/197 (14%)
Query: 798 ENGMFLTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSD-- 854
+ G + +K R+ ++ K R + HPNVV R P +KL +D
Sbjct: 37 DTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV---PDGLQKLAPNDLP 93
Query: 855 -----YISPGSLASFLYDRPG----RKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGN 905
Y G L +L ++GP T + D++ L YLH +R + H +
Sbjct: 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT------LLSDISSALRYLHENRII-HRD 146
Query: 906 LKATNILLD-GPD-LNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSF 963
LK NI+L GP L ++ D + + Q + + G L Y APEL KK +
Sbjct: 147 LKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV--GTLQYLAPELLEQKK--YTV 202
Query: 964 KSDVYAFGVILLELLTG 980
D ++FG + E +TG
Sbjct: 203 TVDYWSFGTLAFECITG 219
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 13/204 (6%)
Query: 782 EVLGRSSHGTSYRATLENG----MFLTVKWL-REGVAKQRXXXXXXXXXXXNIRHPNVVG 836
EV+GR G Y TL + + VK L R + + HPNV+
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 837 LRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLH 896
L G ++ L++ Y+ G L +F+ R P T + + VA+G+ YL
Sbjct: 88 LLGICLR-SEGSPLVVLPYMKHGDLRNFI--RNETHNP--TVKDLIGFGLQVAKGMKYLA 142
Query: 897 FDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV-LGYRAPELAA 955
+ V H +L A N +LD +VAD+ L R M G L + L +
Sbjct: 143 SKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 956 SKKPHPSFKSDVYAFGVILLELLT 979
+ + KSDV++FGV+L EL+T
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 11/130 (8%)
Query: 851 ILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATN 910
I+ +Y+ GS L +PG PL I ++ +GL+YLH +R + H ++KA N
Sbjct: 94 IIMEYLGGGSALDLL--KPG----PLEETYIATILREILKGLDYLHSERKI-HRDIKAAN 146
Query: 911 ILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFKSDVYAF 970
+LL + ++AD+ + +T I++ G + APE+ K+ FK+D+++
Sbjct: 147 VLLSEQG-DVKLADFGVAGQLTDT-QIKRNXFVGTPFWMAPEVI--KQSAYDFKADIWSL 202
Query: 971 GVILLELLTG 980
G+ +EL G
Sbjct: 203 GITAIELAKG 212
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 13/204 (6%)
Query: 782 EVLGRSSHGTSYRATLENG----MFLTVKWL-REGVAKQRXXXXXXXXXXXNIRHPNVVG 836
EV+GR G Y TL + + VK L R + + HPNV+
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 837 LRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLH 896
L G ++ L++ Y+ G L +F+ R P T + + VA+G+ YL
Sbjct: 93 LLGICLR-SEGSPLVVLPYMKHGDLRNFI--RNETHNP--TVKDLIGFGLQVAKGMKYLA 147
Query: 897 FDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV-LGYRAPELAA 955
+ V H +L A N +LD +VAD+ L R M G L + L +
Sbjct: 148 SKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 956 SKKPHPSFKSDVYAFGVILLELLT 979
+ + KSDV++FGV+L EL+T
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 84/197 (42%), Gaps = 28/197 (14%)
Query: 798 ENGMFLTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSD-- 854
+ G + +K R+ ++ K R + HPNVV R P +KL +D
Sbjct: 38 DTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV---PDGLQKLAPNDLP 94
Query: 855 -----YISPGSLASFLYDRPG----RKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGN 905
Y G L +L ++GP T + D++ L YLH +R + H +
Sbjct: 95 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT------LLSDISSALRYLHENRII-HRD 147
Query: 906 LKATNILLD-GPD-LNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSF 963
LK NI+L GP L ++ D + + Q + + G L Y APEL KK +
Sbjct: 148 LKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV--GTLQYLAPELLEQKK--YTV 203
Query: 964 KSDVYAFGVILLELLTG 980
D ++FG + E +TG
Sbjct: 204 TVDYWSFGTLAFECITG 220
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 14/132 (10%)
Query: 851 ILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATN 910
++ +Y+ GSL +L P + AQ L A + G+ YLH + H +L A N
Sbjct: 112 LVMEYVPLGSLRDYL---PRHS---IGLAQLLLFAQQICEGMAYLHAQHYI-HRDLAARN 164
Query: 911 ILLDGPDLNARVADYCLHRLMTQAGTIEQILDAG---VLGYRAPELAASKKPHPSFKSDV 967
+LLD L ++ D+ L + + + ++ + G V Y APE K + + SDV
Sbjct: 165 VLLDNDRL-VKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-APECLKEYKFY--YASDV 220
Query: 968 YAFGVILLELLT 979
++FGV L ELLT
Sbjct: 221 WSFGVTLYELLT 232
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 13/204 (6%)
Query: 782 EVLGRSSHGTSYRATLENG----MFLTVKWL-REGVAKQRXXXXXXXXXXXNIRHPNVVG 836
EV+GR G Y TL + + VK L R + + HPNV+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 837 LRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLH 896
L G ++ L++ Y+ G L +F+ R P T + + VA+G+ YL
Sbjct: 95 LLGICLR-SEGSPLVVLPYMKHGDLRNFI--RNETHNP--TVKDLIGFGLQVAKGMKYLA 149
Query: 897 FDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV-LGYRAPELAA 955
+ V H +L A N +LD +VAD+ L R M G L + L +
Sbjct: 150 SKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 956 SKKPHPSFKSDVYAFGVILLELLT 979
+ + KSDV++FGV+L EL+T
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 41/245 (16%)
Query: 830 RHPNVVGLRGYYWGPTQHEKL-ILSDYISPGSLASFLYDR--PGRK---------GPPLT 877
+H N++ L G TQ L ++ +Y S G+L +L R PG + L+
Sbjct: 92 KHKNIINLLG---ACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLS 148
Query: 878 WAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTI 937
+ A VARG+ YL + + H +L A N+L+ ++ ++AD+ L R +
Sbjct: 149 SKDLVSCAYQVARGMEYLASKKCI-HRDLAARNVLVTEDNV-MKIADFGLARDIHHIDXX 206
Query: 938 EQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISGEGAGVDL 996
++ + + + + APE + + +SDV++FGV+L E+ T + GV +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEIFT------LGGSPYPGVPV 258
Query: 997 TDWMQLKVAEGHGSDCFDAAVMPEMVNPAAEKGMKEVLGIALRCIRSV-SERPGIKTIYE 1055
+ +L + EGH D E+ + C +V S+RP K + E
Sbjct: 259 EELFKL-LKEGHRMD-------------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
Query: 1056 DLSSI 1060
DL I
Sbjct: 305 DLDRI 309
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 13/204 (6%)
Query: 782 EVLGRSSHGTSYRATLENG----MFLTVKWL-REGVAKQRXXXXXXXXXXXNIRHPNVVG 836
EV+GR G Y TL + + VK L R + + HPNV+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 837 LRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLH 896
L G ++ L++ Y+ G L +F+ R P T + + VA+G+ YL
Sbjct: 96 LLGICLR-SEGSPLVVLPYMKHGDLRNFI--RNETHNP--TVKDLIGFGLQVAKGMKYLA 150
Query: 897 FDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV-LGYRAPELAA 955
+ V H +L A N +LD +VAD+ L R M G L + L +
Sbjct: 151 SKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 956 SKKPHPSFKSDVYAFGVILLELLT 979
+ + KSDV++FGV+L EL+T
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 13/204 (6%)
Query: 782 EVLGRSSHGTSYRATLENG----MFLTVKWL-REGVAKQRXXXXXXXXXXXNIRHPNVVG 836
EV+GR G Y TL + + VK L R + + HPNV+
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 837 LRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLH 896
L G ++ L++ Y+ G L +F+ R P T + + VA+G+ YL
Sbjct: 91 LLGICLR-SEGSPLVVLPYMKHGDLRNFI--RNETHNP--TVKDLIGFGLQVAKGMKYLA 145
Query: 897 FDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV-LGYRAPELAA 955
+ V H +L A N +LD +VAD+ L R M G L + L +
Sbjct: 146 SKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 956 SKKPHPSFKSDVYAFGVILLELLT 979
+ + KSDV++FGV+L EL+T
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 78/152 (51%), Gaps = 14/152 (9%)
Query: 831 HPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVAR 890
HPNV+ + G P +++ ++ GSL + L++ + +Q +K A+D+AR
Sbjct: 66 HPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFV---VDQSQAVKFALDMAR 122
Query: 891 GLNYLH-FDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYR 949
G+ +LH + +P L + ++++D D+ AR++ + G + +
Sbjct: 123 GMAFLHTLEPLIPRHALNSRSVMID-EDMTARISMADVKFSFQSPGRMY------APAWV 175
Query: 950 APELAASKKPHPSFK--SDVYAFGVILLELLT 979
APE A KKP + + +D+++F V+L EL+T
Sbjct: 176 APE-ALQKKPEDTNRRSADMWSFAVLLWELVT 206
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
+RHP+++ L PT +++ + G L ++ ++ +T + + +
Sbjct: 66 LRHPHIIKLYDVITTPTD---IVMVIEYAGGELFDYIVEKK-----RMTEDEGRRFFQQI 117
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ Y H + V H +LK N+LLD +LN ++AD+ L +MT ++ G Y
Sbjct: 118 ICAIEYCHRHKIV-HRDLKPENLLLDD-NLNVKIADFGLSNIMTDGNFLKT--SCGSPNY 173
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGD 985
APE+ + K + + DV++ G++L +L GR D
Sbjct: 174 AAPEV-INGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 108/248 (43%), Gaps = 47/248 (18%)
Query: 830 RHPNVVGLRGYYWGPTQHEKL-ILSDYISPGSLASFLYDRPGRKGPPLTWAQR------- 881
+H N++ L G TQ L ++ +Y S G+L +L R+ P L ++
Sbjct: 84 KHKNIINLLG---ACTQDGPLYVIVEYASKGNLREYL---QARRPPGLEYSYNPSHNPEE 137
Query: 882 -------LKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQA 934
+ A VARG+ YL + + H +L A N+L+ ++ ++AD+ L R +
Sbjct: 138 QLSSKDLVSCAYQVARGMEYLASKKCI-HRDLAARNVLVTEDNV-MKIADFGLARDIHHI 195
Query: 935 GTIEQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISGEGAG 993
++ + + + + APE + + +SDV++FGV+L E+ T + G
Sbjct: 196 DYYKKTTNGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEIFT------LGGSPYPG 247
Query: 994 VDLTDWMQLKVAEGHGSDCFDAAVMPEMVNPAAEKGMKEVLGIALRCIRSV-SERPGIKT 1052
V + + +L + EGH D E+ + C +V S+RP K
Sbjct: 248 VPVEELFKL-LKEGHRMD-------------KPSNCTNELYMMMRDCWHAVPSQRPTFKQ 293
Query: 1053 IYEDLSSI 1060
+ EDL I
Sbjct: 294 LVEDLDRI 301
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 62/246 (25%), Positives = 111/246 (45%), Gaps = 43/246 (17%)
Query: 830 RHPNVVGLRGYYWGPTQHEKL-ILSDYISPGSLASFLYDR--PGRK---------GPPLT 877
+H N++ L G TQ L ++ +Y S G+L +L R PG + +T
Sbjct: 99 KHKNIINLLG---ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 878 WAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTI 937
+ + +ARG+ YL + + H +L A N+L+ ++ R+AD+ L R +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNV-MRIADFGLARDINNIDYY 213
Query: 938 EQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISGEG-AGVD 995
++ + + + + APE + + +SDV++FGV++ E+ T + G G+
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEIFT-------LGGSPYPGIP 264
Query: 996 LTDWMQLKVAEGHGSDCFDAAVMPEMVNPAAEKGMKEVLGIALRCIRSV-SERPGIKTIY 1054
+ + +L + EGH M PA E+ + C +V S+RP K +
Sbjct: 265 VEELFKL-LKEGH-----------RMDKPA--NCTNELYMMMRDCWHAVPSQRPTFKQLV 310
Query: 1055 EDLSSI 1060
EDL I
Sbjct: 311 EDLDRI 316
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 7/114 (6%)
Query: 871 RKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRL 930
+GP L RL + RGL Y+H V H +LK N+ ++ DL ++ D+ L R+
Sbjct: 113 EQGPLLEEHARL-FMYQLLRGLKYIH-SANVLHRDLKPANLFINTEDLVLKIGDFGLARI 170
Query: 931 MTQAGTIEQILDAGVLG--YRAPELAASKKPHPSFKS-DVYAFGVILLELLTGR 981
M + + L G++ YR+P L S P+ K+ D++A G I E+LTG+
Sbjct: 171 MDPHYSHKGHLSEGLVTKWYRSPRLLLS--PNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 23/205 (11%)
Query: 784 LGRSSHGTSYRATLENGMFLTVKWL----REGVAKQRXXXXXXXXXXXNIRHPNVVGLRG 839
+GR S T Y+ L+ + V W R+ +R ++HPN+V
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 840 YYWGPTQHEKLIL--SDYISPGSLASFLYDRPGRKGPPL-TWAQRLKIAVDVARGLNYLH 896
+ + +K I+ ++ + G+L ++L K L +W ++ + +GL +LH
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQ------ILKGLQFLH 146
Query: 897 FDRAVP--HGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELA 954
R P H +LK NI + GP + ++ D L L +A + ++ G + APE
Sbjct: 147 -TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL-KRASFAKAVI--GTPEFXAPEXY 202
Query: 955 ASKKPHPSFKSDVYAFGVILLELLT 979
K DVYAFG LE T
Sbjct: 203 EEKYDE---SVDVYAFGXCXLEXAT 224
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 31/166 (18%)
Query: 831 HPNVVGL------RGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--------- 875
HPN++ L RGY + + +Y G+L FL + P
Sbjct: 75 HPNIINLLGACEHRGYLY--------LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTA 126
Query: 876 --LTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQ 933
L+ Q L A DVARG++YL + + H +L A NIL+ G + A++AD+ L R Q
Sbjct: 127 STLSSQQLLHFAADVARGMDYLSQKQFI-HRDLAARNILV-GENYVAKIADFGLSR--GQ 182
Query: 934 AGTIEQILDAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+++ + G L R + + + SDV+++GV+L E+++
Sbjct: 183 EVYVKKTM--GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 31/166 (18%)
Query: 831 HPNVVGL------RGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--------- 875
HPN++ L RGY + + +Y G+L FL + P
Sbjct: 85 HPNIINLLGACEHRGYLY--------LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTA 136
Query: 876 --LTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQ 933
L+ Q L A DVARG++YL + + H +L A NIL+ G + A++AD+ L R Q
Sbjct: 137 STLSSQQLLHFAADVARGMDYLSQKQFI-HRDLAARNILV-GENYVAKIADFGLSR--GQ 192
Query: 934 AGTIEQILDAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+++ + G L R + + + SDV+++GV+L E+++
Sbjct: 193 EVYVKKTM--GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 54/215 (25%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 774 EELSRAPAEV------LGRSSHGTSYRAT-LENGMFLTVKWLREGVAKQRXXXXXXXXXX 826
+ L++ P EV LG S+G+ Y+A E G + +K + V
Sbjct: 21 DSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVP--VESDLQEIIKEISIM 78
Query: 827 XNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAV 886
P+VV G Y+ T + I+ +Y GS++ + R LT + I
Sbjct: 79 QQCDSPHVVKYYGSYFKNT--DLWIVMEYCGAGSVSDIIRLR----NKTLTEDEIATILQ 132
Query: 887 DVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVL 946
+GL YLHF R + H ++KA NILL+ + +A++AD+ + +T + G
Sbjct: 133 STLKGLEYLHFMRKI-HRDIKAGNILLN-TEGHAKLADFGVAGQLTDXMAKRNXV-IGTP 189
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
+ APE+ ++ + +D+++ G+ +E+ G+
Sbjct: 190 FWMAPEVI--QEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 12/154 (7%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++ +P+VVG G++ ++ + SL R P + R I
Sbjct: 98 SLDNPHVVGFHGFF--EDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI--- 152
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+G+ YLH +R + H +LK N+ L+ D++ ++ D+ L + G ++ L G
Sbjct: 153 --QGVQYLHNNRVI-HRDLKLGNLFLND-DMDVKIGDFGLATKIEFDGERKKTL-CGTPN 207
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y APE+ KK H SF+ D+++ G IL LL G+
Sbjct: 208 YIAPEVLC-KKGH-SFEVDIWSLGCILYTLLVGK 239
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type
Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild Type
Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 110/245 (44%), Gaps = 41/245 (16%)
Query: 830 RHPNVVGLRGYYWGPTQHEKL-ILSDYISPGSLASFLYDR--PGRK---------GPPLT 877
+H N++ L G TQ L ++ +Y S G+L +L R PG + +T
Sbjct: 145 KHKNIINLLG---ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 201
Query: 878 WAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTI 937
+ + +ARG+ YL + + H +L A N+L+ ++ ++AD+ L R +
Sbjct: 202 FKDLVSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNV-MKIADFGLARDINNIDYY 259
Query: 938 EQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISGEGAGVDL 996
++ + + + + APE + + +SDV++FGV++ E+ T + G+ +
Sbjct: 260 KKTTNGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEIFT------LGGSPYPGIPV 311
Query: 997 TDWMQLKVAEGHGSDCFDAAVMPEMVNPAAEKGMKEVLGIALRCIRSV-SERPGIKTIYE 1055
+ +L + EGH D PA E+ + C +V S+RP K + E
Sbjct: 312 EELFKL-LKEGHRMD-----------KPA--NCTNELYMMMRDCWHAVPSQRPTFKQLVE 357
Query: 1056 DLSSI 1060
DL I
Sbjct: 358 DLDRI 362
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGR--KGP-PLTWAQRLKI 884
++HPNV+ L+ + + +L DY + R + K P L +
Sbjct: 74 ELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSL 133
Query: 885 AVDVARGLNYLHFDRAVPHGNLKATNILL--DGPDL-NARVADYCLHRLMTQAGTIEQIL 941
+ G++YLH + V H +LK NIL+ +GP+ ++AD RL L
Sbjct: 134 LYQILDGIHYLHAN-WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADL 192
Query: 942 DAGVL--GYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
D V+ YRAPEL + H + D++A G I ELLT
Sbjct: 193 DPVVVTFWYRAPELLLGAR-HYTKAIDIWAIGCIFAELLT 231
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 782 EVLGRSSHGTSYRATLENG----MFLTVKWL-REGVAKQRXXXXXXXXXXXNIRHPNVVG 836
EV+GR G Y TL + + VK L R + + HPNV+
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 837 LRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLH 896
L G ++ L++ Y+ G L +F+ R P T + + VA+G+ +L
Sbjct: 155 LLGICLR-SEGSPLVVLPYMKHGDLRNFI--RNETHNP--TVKDLIGFGLQVAKGMKFLA 209
Query: 897 FDRAVPHGNLKATNILLDGPDLNARVADYCLHRLM--TQAGTIEQILDAGV-LGYRAPEL 953
+ V H +L A N +LD +VAD+ L R M + ++ A + + + A E
Sbjct: 210 SKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 267
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
++K + KSDV++FGV+L EL+T
Sbjct: 268 LQTQKF--TTKSDVWSFGVLLWELMT 291
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 47/155 (30%), Positives = 83/155 (53%), Gaps = 22/155 (14%)
Query: 831 HPNVVGL-RGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVA 889
HPN+V L +Y+ ++ IL ++ + G++ + + + PLT +Q +
Sbjct: 93 HPNIVKLLDAFYY---ENNLWILIEFCAGGAVDAVMLELE----RPLTESQIQVVCKQTL 145
Query: 890 RGLNYLHFDRAVPHGNLKATNIL--LDGPDLNARVADYCLHRLMTQAGTIEQILDA--GV 945
LNYLH D + H +LKA NIL LDG + ++AD+ + T+ TI++ D+ G
Sbjct: 146 DALNYLH-DNKIIHRDLKAGNILFTLDG---DIKLADFGVSAKNTR--TIQR-RDSFIGT 198
Query: 946 LGYRAPE--LAASKKPHP-SFKSDVYAFGVILLEL 977
+ APE + + K P +K+DV++ G+ L+E+
Sbjct: 199 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 782 EVLGRSSHGTSYRATLENG----MFLTVKWL-REGVAKQRXXXXXXXXXXXNIRHPNVVG 836
EV+GR G Y TL + + VK L R + + HPNV+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 837 LRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLH 896
L G ++ L++ Y+ G L +F+ R P T + + VA+G+ +L
Sbjct: 97 LLGICLR-SEGSPLVVLPYMKHGDLRNFI--RNETHNP--TVKDLIGFGLQVAKGMKFLA 151
Query: 897 FDRAVPHGNLKATNILLDGPDLNARVADYCLHRLM--TQAGTIEQILDAGV-LGYRAPEL 953
+ V H +L A N +LD +VAD+ L R M + ++ A + + + A E
Sbjct: 152 SKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES 209
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
++K + KSDV++FGV+L EL+T
Sbjct: 210 LQTQKF--TTKSDVWSFGVLLWELMT 233
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 12/154 (7%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++ +P+VVG G++ ++ + SL R P + R I
Sbjct: 98 SLDNPHVVGFHGFF--EDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI--- 152
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+G+ YLH +R + H +LK N+ L+ D++ ++ D+ L + G ++ L G
Sbjct: 153 --QGVQYLHNNRVI-HRDLKLGNLFLND-DMDVKIGDFGLATKIEFDGERKKXL-CGTPN 207
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y APE+ KK H SF+ D+++ G IL LL G+
Sbjct: 208 YIAPEVLC-KKGH-SFEVDIWSLGCILYTLLVGK 239
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 782 EVLGRSSHGTSYRATLENG----MFLTVKWL-REGVAKQRXXXXXXXXXXXNIRHPNVVG 836
EV+GR G Y TL + + VK L R + + HPNV+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 837 LRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLH 896
L G ++ L++ Y+ G L +F+ R P T + + VA+G+ +L
Sbjct: 97 LLGICLR-SEGSPLVVLPYMKHGDLRNFI--RNETHNP--TVKDLIGFGLQVAKGMKFLA 151
Query: 897 FDRAVPHGNLKATNILLDGPDLNARVADYCLHRLM--TQAGTIEQILDAGV-LGYRAPEL 953
+ V H +L A N +LD +VAD+ L R M + ++ A + + + A E
Sbjct: 152 SKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 209
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
++K + KSDV++FGV+L EL+T
Sbjct: 210 LQTQKF--TTKSDVWSFGVLLWELMT 233
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 43/246 (17%)
Query: 830 RHPNVVGLRGYYWGPTQHEKL-ILSDYISPGSLASFLYDR--PGRKGP---------PLT 877
+H N++ L G TQ L ++ +Y S G+L +L R PG + +T
Sbjct: 99 KHKNIINLLG---ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMT 155
Query: 878 WAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTI 937
+ + +ARG+ YL + + H +L A N+L+ ++ ++AD+ L R +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNV-MKIADFGLARDINNIDXX 213
Query: 938 EQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISGEG-AGVD 995
++ + + + + APE + + +SDV++FGV++ E+ T + G G+
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEIFT-------LGGSPYPGIP 264
Query: 996 LTDWMQLKVAEGHGSDCFDAAVMPEMVNPAAEKGMKEVLGIALRCIRSV-SERPGIKTIY 1054
+ + +L + EGH M PA E+ + C +V S+RP K +
Sbjct: 265 VEELFKL-LKEGH-----------RMDKPA--NCTNELYMMMRDCWHAVPSQRPTFKQLV 310
Query: 1055 EDLSSI 1060
EDL I
Sbjct: 311 EDLDRI 316
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 25/175 (14%)
Query: 832 PNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARG 891
P +VG G ++ + E I +++ GSL L + GR + K+++ V +G
Sbjct: 83 PYIVGFYGAFY--SDGEISICMEHMDGGSLDQVL-KKAGRIPEQILG----KVSIAVIKG 135
Query: 892 LNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDA------GV 945
L YL + H ++K +NIL++ ++ D+ G Q++D+ G
Sbjct: 136 LTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDF---------GVSGQLIDSMANSFVGT 185
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISGEGAGVDLTDWM 1000
Y +PE + H S +SD+++ G+ L+E+ GR SG A +L D++
Sbjct: 186 RSYMSPERL--QGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYI 238
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 782 EVLGRSSHGTSYRATLENG----MFLTVKWL-REGVAKQRXXXXXXXXXXXNIRHPNVVG 836
EV+GR G Y TL + + VK L R + + HPNV+
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 837 LRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLH 896
L G ++ L++ Y+ G L +F+ R P T + + VA+G+ +L
Sbjct: 101 LLGICLR-SEGSPLVVLPYMKHGDLRNFI--RNETHNP--TVKDLIGFGLQVAKGMKFLA 155
Query: 897 FDRAVPHGNLKATNILLDGPDLNARVADYCLHRLM--TQAGTIEQILDAGV-LGYRAPEL 953
+ V H +L A N +LD +VAD+ L R M + ++ A + + + A E
Sbjct: 156 SKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 213
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
++K + KSDV++FGV+L EL+T
Sbjct: 214 LQTQKF--TTKSDVWSFGVLLWELMT 237
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 782 EVLGRSSHGTSYRATLENG----MFLTVKWL-REGVAKQRXXXXXXXXXXXNIRHPNVVG 836
EV+GR G Y TL + + VK L R + + HPNV+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 837 LRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLH 896
L G ++ L++ Y+ G L +F+ R P T + + VA+G+ +L
Sbjct: 96 LLGICLR-SEGSPLVVLPYMKHGDLRNFI--RNETHNP--TVKDLIGFGLQVAKGMKFLA 150
Query: 897 FDRAVPHGNLKATNILLDGPDLNARVADYCLHRLM--TQAGTIEQILDAGV-LGYRAPEL 953
+ V H +L A N +LD +VAD+ L R M + ++ A + + + A E
Sbjct: 151 SKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
++K + KSDV++FGV+L EL+T
Sbjct: 209 LQTQKF--TTKSDVWSFGVLLWELMT 232
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 43/246 (17%)
Query: 830 RHPNVVGLRGYYWGPTQHEKL-ILSDYISPGSLASFLYDR--PGRK---------GPPLT 877
+H N++ L G TQ L ++ +Y S G+L +L R PG + +T
Sbjct: 99 KHKNIINLLG---ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 878 WAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTI 937
+ + +ARG+ YL + + H +L A N+L+ ++ ++AD+ L R +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNV-MKIADFGLARDINNIDXX 213
Query: 938 EQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISGEG-AGVD 995
++ + + + + APE + + +SDV++FGV++ E+ T + G G+
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEIFT-------LGGSPYPGIP 264
Query: 996 LTDWMQLKVAEGHGSDCFDAAVMPEMVNPAAEKGMKEVLGIALRCIRSV-SERPGIKTIY 1054
+ + +L + EGH M PA E+ + C +V S+RP K +
Sbjct: 265 VEELFKL-LKEGH-----------RMDKPA--NCTNELYMMMRDCWHAVPSQRPTFKQLV 310
Query: 1055 EDLSSI 1060
EDL I
Sbjct: 311 EDLDRI 316
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 782 EVLGRSSHGTSYRATLENG----MFLTVKWL-REGVAKQRXXXXXXXXXXXNIRHPNVVG 836
EV+GR G Y TL + + VK L R + + HPNV+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 837 LRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLH 896
L G ++ L++ Y+ G L +F+ R P T + + VA+G+ +L
Sbjct: 96 LLGICLR-SEGSPLVVLPYMKHGDLRNFI--RNETHNP--TVKDLIGFGLQVAKGMKFLA 150
Query: 897 FDRAVPHGNLKATNILLDGPDLNARVADYCLHRLM--TQAGTIEQILDAGV-LGYRAPEL 953
+ V H +L A N +LD +VAD+ L R M + ++ A + + + A E
Sbjct: 151 SKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
++K + KSDV++FGV+L EL+T
Sbjct: 209 LQTQKF--TTKSDVWSFGVLLWELMT 232
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 46.6 bits (109), Expect = 6e-05, Method: Composition-based stats.
Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 43/246 (17%)
Query: 830 RHPNVVGLRGYYWGPTQHEKL-ILSDYISPGSLASFLYDR--PGRK---------GPPLT 877
+H N++ L G TQ L ++ +Y S G+L +L R PG + +T
Sbjct: 86 KHKNIINLLG---ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 142
Query: 878 WAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTI 937
+ + +ARG+ YL + + H +L A N+L+ ++ ++AD+ L R +
Sbjct: 143 FKDLVSCTYQLARGMEYLASQKCI-HRDLTARNVLVTENNV-MKIADFGLARDINNIDYY 200
Query: 938 EQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISGEG-AGVD 995
++ + + + + APE + + +SDV++FGV++ E+ T + G G+
Sbjct: 201 KKTTNGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEIFT-------LGGSPYPGIP 251
Query: 996 LTDWMQLKVAEGHGSDCFDAAVMPEMVNPAAEKGMKEVLGIALRCIRSV-SERPGIKTIY 1054
+ + +L + EGH M PA E+ + C +V S+RP K +
Sbjct: 252 VEELFKL-LKEGH-----------RMDKPA--NCTNELYMMMRDCWHAVPSQRPTFKQLV 297
Query: 1055 EDLSSI 1060
EDL I
Sbjct: 298 EDLDRI 303
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 43/246 (17%)
Query: 830 RHPNVVGLRGYYWGPTQHEKL-ILSDYISPGSLASFLYDR--PGRK---------GPPLT 877
+H N++ L G TQ L ++ +Y S G+L +L R PG + +T
Sbjct: 91 KHKNIINLLG---ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 147
Query: 878 WAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTI 937
+ + +ARG+ YL + + H +L A N+L+ ++ ++AD+ L R +
Sbjct: 148 FKDLVSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNV-MKIADFGLARDINNIDYY 205
Query: 938 EQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISGEG-AGVD 995
++ + + + + APE + + +SDV++FGV++ E+ T + G G+
Sbjct: 206 KKTTNGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEIFT-------LGGSPYPGIP 256
Query: 996 LTDWMQLKVAEGHGSDCFDAAVMPEMVNPAAEKGMKEVLGIALRCIRSV-SERPGIKTIY 1054
+ + +L + EGH M PA E+ + C +V S+RP K +
Sbjct: 257 VEELFKL-LKEGH-----------RMDKPA--NCTNELYMMMRDCWHAVPSQRPTFKQLV 302
Query: 1055 EDLSSI 1060
EDL I
Sbjct: 303 EDLDRI 308
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In
Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In
Complex With Arq 069
Length = 313
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 43/246 (17%)
Query: 830 RHPNVVGLRGYYWGPTQHEKL-ILSDYISPGSLASFLYDR--PGRK---------GPPLT 877
+H N++ L G TQ L ++ +Y S G+L +L R PG + +T
Sbjct: 88 KHKNIINLLG---ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 144
Query: 878 WAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTI 937
+ + +ARG+ YL + + H +L A N+L+ ++ ++AD+ L R +
Sbjct: 145 FKDLVSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNV-MKIADFGLARDINNIDYY 202
Query: 938 EQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISGEG-AGVD 995
++ + + + + APE + + +SDV++FGV++ E+ T + G G+
Sbjct: 203 KKTTNGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEIFT-------LGGSPYPGIP 253
Query: 996 LTDWMQLKVAEGHGSDCFDAAVMPEMVNPAAEKGMKEVLGIALRCIRSV-SERPGIKTIY 1054
+ + +L + EGH M PA E+ + C +V S+RP K +
Sbjct: 254 VEELFKL-LKEGH-----------RMDKPA--NCTNELYMMMRDCWHAVPSQRPTFKQLV 299
Query: 1055 EDLSSI 1060
EDL I
Sbjct: 300 EDLDRI 305
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 12/154 (7%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++ +P+VVG G++ ++ + SL R P + R I
Sbjct: 82 SLDNPHVVGFHGFF--EDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI--- 136
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+G+ YLH +R + H +LK N+ L+ D++ ++ D+ L + G ++ L G
Sbjct: 137 --QGVQYLHNNRVI-HRDLKLGNLFLND-DMDVKIGDFGLATKIEFDGERKKDL-CGTPN 191
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y APE+ KK H SF+ D+++ G IL LL G+
Sbjct: 192 YIAPEVLC-KKGH-SFEVDIWSLGCILYTLLVGK 223
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 43/246 (17%)
Query: 830 RHPNVVGLRGYYWGPTQHEKL-ILSDYISPGSLASFLYDR--PGRK---------GPPLT 877
+H N++ L G TQ L ++ +Y S G+L +L R PG + +T
Sbjct: 99 KHKNIINLLG---ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 878 WAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTI 937
+ + +ARG+ YL + + H +L A N+L+ ++ ++AD+ L R +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNV-MKIADFGLARDINNIDYY 213
Query: 938 EQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISGEG-AGVD 995
++ + + + + APE + + +SDV++FGV++ E+ T + G G+
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEIFT-------LGGSPYPGIP 264
Query: 996 LTDWMQLKVAEGHGSDCFDAAVMPEMVNPAAEKGMKEVLGIALRCIRSV-SERPGIKTIY 1054
+ + +L + EGH M PA E+ + C +V S+RP K +
Sbjct: 265 VEELFKL-LKEGH-----------RMDKPA--NCTNELYMMMRDCWHAVPSQRPTFKQLV 310
Query: 1055 EDLSSI 1060
EDL I
Sbjct: 311 EDLDRI 316
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 57/219 (26%), Positives = 102/219 (46%), Gaps = 25/219 (11%)
Query: 773 PEELSRAPAEVLGRSSHGTSYRATL-ENGMFLTVKWLREGVA-KQRXXXXXXXXXXXNIR 830
P+E+S +V+G S G Y+A L ++G + +K + +G A K R +
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR-----ELQIMRKLD 71
Query: 831 HPNVVGLRGYYWGPTQHE-----KLILSDYISPGSL--ASFLYDRPGRKGPPLTWAQRLK 883
H N+V LR +++ + + L+L DY+ P ++ + Y R ++ P+ + +
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVL-DYV-PATVYRVARHYSR-AKQTLPVIYVKLY- 127
Query: 884 IAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY-CLHRLMTQAGTIEQILD 942
+ R L Y+H + H ++K N+LLD ++ D+ +L+ + I
Sbjct: 128 -MYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 943 AGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPEL + S DV++ G +L ELL G+
Sbjct: 186 R---YYRAPELIFGATDYTS-SIDVWSAGCVLAELLLGQ 220
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 782 EVLGRSSHGTSYRATLENG----MFLTVKWL-REGVAKQRXXXXXXXXXXXNIRHPNVVG 836
EV+GR G Y TL + + VK L R + + HPNV+
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 837 LRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLH 896
L G ++ L++ Y+ G L +F+ R P T + + VA+G+ +L
Sbjct: 94 LLGICLR-SEGSPLVVLPYMKHGDLRNFI--RNETHNP--TVKDLIGFGLQVAKGMKFLA 148
Query: 897 FDRAVPHGNLKATNILLDGPDLNARVADYCLHRLM--TQAGTIEQILDAGV-LGYRAPEL 953
+ V H +L A N +LD +VAD+ L R M + ++ A + + + A E
Sbjct: 149 SKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
++K + KSDV++FGV+L EL+T
Sbjct: 207 LQTQKF--TTKSDVWSFGVLLWELMT 230
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 43/246 (17%)
Query: 830 RHPNVVGLRGYYWGPTQHEKL-ILSDYISPGSLASFLYDR--PGRK---GPP------LT 877
+H N++ L G TQ L ++ +Y S G+L +L R PG + P L+
Sbjct: 77 KHKNIINLLG---ACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLS 133
Query: 878 WAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTI 937
+ A VARG+ YL + + H +L A N+L+ ++ ++AD+ L R +
Sbjct: 134 SKDLVSCAYQVARGMEYLASKKCI-HRDLAARNVLVTEDNV-MKIADFGLARDIHHIDYY 191
Query: 938 EQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISGEG-AGVD 995
++ + + + + APE + + +SDV++FGV+L E+ T + G GV
Sbjct: 192 KKTTNGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEIFT-------LGGSPYPGVP 242
Query: 996 LTDWMQLKVAEGHGSDCFDAAVMPEMVNPAAEKGMKEVLGIALRCIRSV-SERPGIKTIY 1054
+ + +L + EGH M P+ E+ + C +V S+RP K +
Sbjct: 243 VEELFKL-LKEGH-----------RMDKPS--NCTNELYMMMRDCWHAVPSQRPTFKQLV 288
Query: 1055 EDLSSI 1060
EDL I
Sbjct: 289 EDLDRI 294
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 46.6 bits (109), Expect = 8e-05, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 12/154 (7%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++ +P+VVG G++ ++ + SL R P + R I
Sbjct: 98 SLDNPHVVGFHGFF--EDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI--- 152
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+G+ YLH +R + H +LK N+ L+ D++ ++ D+ L + G ++ L G
Sbjct: 153 --QGVQYLHNNRVI-HRDLKLGNLFLND-DMDVKIGDFGLATKIEFDGERKKDL-CGTPN 207
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y APE+ KK H SF+ D+++ G IL LL G+
Sbjct: 208 YIAPEVLC-KKGH-SFEVDIWSLGCILYTLLVGK 239
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 832 PNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARG 891
P +VG G ++ + E I +++ GSL L + ++ P K+++ V RG
Sbjct: 74 PYIVGFYGAFY--SDGEISICMEHMDGGSLDQVL--KEAKRIPEEILG---KVSIAVLRG 126
Query: 892 LNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDA------GV 945
L YL + H ++K +NIL++ ++ D+ G Q++D+ G
Sbjct: 127 LAYLREKHQIMHRDVKPSNILVNSRG-EIKLCDF---------GVSGQLIDSMANSFVGT 176
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y APE H S +SD+++ G+ L+EL GR
Sbjct: 177 RSYMAPERLQGT--HYSVQSDIWSMGLSLVELAVGR 210
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 43/246 (17%)
Query: 830 RHPNVVGLRGYYWGPTQHEKL-ILSDYISPGSLASFLYDR--PGRK---GPP------LT 877
+H N++ L G TQ L ++ +Y S G+L +L R PG + P L+
Sbjct: 85 KHKNIINLLG---ACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 141
Query: 878 WAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTI 937
+ A VARG+ YL + + H +L A N+L+ ++ ++AD+ L R +
Sbjct: 142 SKDLVSCAYQVARGMEYLASKKCI-HRDLAARNVLVTEDNV-MKIADFGLARDIHHIDYY 199
Query: 938 EQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISGEG-AGVD 995
++ + + + + APE + + +SDV++FGV+L E+ T + G GV
Sbjct: 200 KKTTNGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEIFT-------LGGSPYPGVP 250
Query: 996 LTDWMQLKVAEGHGSDCFDAAVMPEMVNPAAEKGMKEVLGIALRCIRSV-SERPGIKTIY 1054
+ + +L + EGH D E+ + C +V S+RP K +
Sbjct: 251 VEELFKL-LKEGHRMD-------------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 296
Query: 1055 EDLSSI 1060
EDL I
Sbjct: 297 EDLDRI 302
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 773 PEELSRAPAEVLGRSSHGTSYRATL-ENGMFLTVKWLREGVA-KQRXXXXXXXXXXXNIR 830
P+E+S +V+G S G Y+A L ++G + +K + +G A K R +
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR-----ELQIMRKLD 71
Query: 831 HPNVVGLRGYYWGPTQHE-----KLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIA 885
H N+V LR +++ + + L+L DY+ + ++ P+ + +
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVL-DYVPETVYRVARHYSRAKQTLPVIYVKLY--M 128
Query: 886 VDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY-CLHRLMTQAGTIEQILDAG 944
+ R L Y+H + H ++K N+LLD ++ D+ +L+ + I
Sbjct: 129 YQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR- 186
Query: 945 VLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPEL + S DV++ G +L ELL G+
Sbjct: 187 --YYRAPELIFGATDYTS-SIDVWSAGCVLAELLLGQ 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 773 PEELSRAPAEVLGRSSHGTSYRATL-ENGMFLTVKWLREGVA-KQRXXXXXXXXXXXNIR 830
P+E+S +V+G S G Y+A L ++G + +K + +G A K R +
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR-----ELQIMRKLD 71
Query: 831 HPNVVGLRGYYWGPTQHE-----KLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIA 885
H N+V LR +++ + + L+L DY+ + ++ P+ + +
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVL-DYVPETVYRVARHYSRAKQTLPVIYVKLY--M 128
Query: 886 VDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY-CLHRLMTQAGTIEQILDAG 944
+ R L Y+H + H ++K N+LLD ++ D+ +L+ + I
Sbjct: 129 YQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR- 186
Query: 945 VLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPEL + S DV++ G +L ELL G+
Sbjct: 187 --YYRAPELIFGATDYTS-SIDVWSAGCVLAELLLGQ 220
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 43/246 (17%)
Query: 830 RHPNVVGLRGYYWGPTQHEKL-ILSDYISPGSLASFLYDR--PGRK---------GPPLT 877
+H N++ L G TQ L ++ +Y S G+L +L R PG + +T
Sbjct: 99 KHKNIITLLG---ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 878 WAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTI 937
+ + +ARG+ YL + + H +L A N+L+ ++ ++AD+ L R +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNV-MKIADFGLARDINNIDYY 213
Query: 938 EQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISGEG-AGVD 995
++ + + + + APE + + +SDV++FGV++ E+ T + G G+
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEIFT-------LGGSPYPGIP 264
Query: 996 LTDWMQLKVAEGHGSDCFDAAVMPEMVNPAAEKGMKEVLGIALRCIRSV-SERPGIKTIY 1054
+ + +L + EGH M PA E+ + C +V S+RP K +
Sbjct: 265 VEELFKL-LKEGH-----------RMDKPA--NCTNELYMMMRDCWHAVPSQRPTFKQLV 310
Query: 1055 EDLSSI 1060
EDL I
Sbjct: 311 EDLDRI 316
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 22/155 (14%)
Query: 831 HPNVVGL-RGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVA 889
HPN+V L +Y+ ++ IL ++ + G++ + + + PLT +Q +
Sbjct: 93 HPNIVKLLDAFYY---ENNLWILIEFCAGGAVDAVMLELE----RPLTESQIQVVCKQTL 145
Query: 890 RGLNYLHFDRAVPHGNLKATNIL--LDGPDLNARVADYCLHRLMTQAGTIEQILDA--GV 945
LNYLH D + H +LKA NIL LDG + ++AD+ + T+ Q D+ G
Sbjct: 146 DALNYLH-DNKIIHRDLKAGNILFTLDG---DIKLADFGVSAKNTRX---IQRRDSFIGT 198
Query: 946 LGYRAPE--LAASKKPHP-SFKSDVYAFGVILLEL 977
+ APE + + K P +K+DV++ G+ L+E+
Sbjct: 199 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
+RHP+++ L Y ++ E +++ +Y + L ++ R ++ + + +
Sbjct: 71 LRHPHIIKL--YDVIKSKDEIIMVIEY-AGNELFDYIVQRD-----KMSEQEARRFFQQI 122
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ Y H + V H +LK N+LLD LN ++AD+ L +MT ++ G Y
Sbjct: 123 ISAVEYCHRHKIV-HRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKT--SCGSPNY 178
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGD 985
APE+ S K + + DV++ GVIL +L R D
Sbjct: 179 AAPEV-ISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 18/153 (11%)
Query: 831 HPNVVGL-RGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVA 889
HPN+V L +Y+ ++ IL ++ + G++ + + + PLT +Q +
Sbjct: 93 HPNIVKLLDAFYY---ENNLWILIEFCAGGAVDAVMLELE----RPLTESQIQVVCKQTL 145
Query: 890 RGLNYLHFDRAVPHGNLKATNIL--LDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
LNYLH D + H +LKA NIL LDG + ++AD+ + T+ G
Sbjct: 146 DALNYLH-DNKIIHRDLKAGNILFTLDG---DIKLADFGVSAKNTRXIQRRDXF-IGTPY 200
Query: 948 YRAPE--LAASKKPHP-SFKSDVYAFGVILLEL 977
+ APE + + K P +K+DV++ G+ L+E+
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 43/246 (17%)
Query: 830 RHPNVVGLRGYYWGPTQHEKL-ILSDYISPGSLASFLYDR--PGRK---------GPPLT 877
+H N++ L G TQ L ++ +Y S G+L +L R PG + +T
Sbjct: 99 KHKNIINLLG---ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 878 WAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTI 937
+ + +ARG+ YL + + H +L A N+L+ ++ ++AD+ L R +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNV-MKIADFGLARDINNIDYY 213
Query: 938 EQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISGEG-AGVD 995
+ + + + + APE + + +SDV++FGV++ E+ T + G G+
Sbjct: 214 KNTTNGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEIFT-------LGGSPYPGIP 264
Query: 996 LTDWMQLKVAEGHGSDCFDAAVMPEMVNPAAEKGMKEVLGIALRCIRSV-SERPGIKTIY 1054
+ + +L + EGH M PA E+ + C +V S+RP K +
Sbjct: 265 VEELFKL-LKEGH-----------RMDKPA--NCTNELYMMMRDCWHAVPSQRPTFKQLV 310
Query: 1055 EDLSSI 1060
EDL I
Sbjct: 311 EDLDRI 316
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 43/246 (17%)
Query: 830 RHPNVVGLRGYYWGPTQHEKL-ILSDYISPGSLASFLYDR--PGRK---GPP------LT 877
+H N++ L G TQ L ++ +Y S G+L +L R PG + P L+
Sbjct: 92 KHKNIINLLG---ACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 148
Query: 878 WAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTI 937
+ A VARG+ YL + + H +L A N+L+ ++ ++AD+ L R +
Sbjct: 149 SKDLVSCAYQVARGMEYLASKKCI-HRDLAARNVLVTEDNV-MKIADFGLARDIHHIDYY 206
Query: 938 EQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISGEG-AGVD 995
++ + + + + APE + + +SDV++FGV+L E+ T + G GV
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEIFT-------LGGSPYPGVP 257
Query: 996 LTDWMQLKVAEGHGSDCFDAAVMPEMVNPAAEKGMKEVLGIALRCIRSV-SERPGIKTIY 1054
+ + +L + EGH D E+ + C +V S+RP K +
Sbjct: 258 VEELFKL-LKEGHRMD-------------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303
Query: 1055 EDLSSI 1060
EDL I
Sbjct: 304 EDLDRI 309
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 43/246 (17%)
Query: 830 RHPNVVGLRGYYWGPTQHEKL-ILSDYISPGSLASFLYDR--PGRK---GPP------LT 877
+H N++ L G TQ L ++ +Y S G+L +L R PG + P L+
Sbjct: 92 KHKNIINLLG---ACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLS 148
Query: 878 WAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTI 937
+ A VARG+ YL + + H +L A N+L+ ++ ++AD+ L R +
Sbjct: 149 SKDLVSCAYQVARGMEYLASKKCI-HRDLAARNVLVTEDNV-MKIADFGLARDIHHIDYY 206
Query: 938 EQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISGEG-AGVD 995
++ + + + + APE + + +SDV++FGV+L E+ T + G GV
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEIFT-------LGGSPYPGVP 257
Query: 996 LTDWMQLKVAEGHGSDCFDAAVMPEMVNPAAEKGMKEVLGIALRCIRSV-SERPGIKTIY 1054
+ + +L + EGH D E+ + C +V S+RP K +
Sbjct: 258 VEELFKL-LKEGHRMD-------------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303
Query: 1055 EDLSSI 1060
EDL I
Sbjct: 304 EDLDRI 309
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In
Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In
Complex With Arq 069
Length = 306
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 43/246 (17%)
Query: 830 RHPNVVGLRGYYWGPTQHEKL-ILSDYISPGSLASFLYDR--PGRK---GPP------LT 877
+H N++ L G TQ L ++ +Y S G+L +L R PG + P L+
Sbjct: 81 KHKNIINLLG---ACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 137
Query: 878 WAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTI 937
+ A VARG+ YL + + H +L A N+L+ ++ ++AD+ L R +
Sbjct: 138 SKDLVSCAYQVARGMEYLASKKCI-HRDLAARNVLVTEDNV-MKIADFGLARDIHHIDYY 195
Query: 938 EQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISGEG-AGVD 995
++ + + + + APE + + +SDV++FGV+L E+ T + G GV
Sbjct: 196 KKTTNGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEIFT-------LGGSPYPGVP 246
Query: 996 LTDWMQLKVAEGHGSDCFDAAVMPEMVNPAAEKGMKEVLGIALRCIRSV-SERPGIKTIY 1054
+ + +L + EGH D E+ + C +V S+RP K +
Sbjct: 247 VEELFKL-LKEGHRMD-------------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 292
Query: 1055 EDLSSI 1060
EDL I
Sbjct: 293 EDLDRI 298
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
Length = 317
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 43/246 (17%)
Query: 830 RHPNVVGLRGYYWGPTQHEKL-ILSDYISPGSLASFLYDR--PGRK---GPP------LT 877
+H N++ L G TQ L ++ +Y S G+L +L R PG + P L+
Sbjct: 92 KHKNIINLLG---ACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLS 148
Query: 878 WAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTI 937
+ A VARG+ YL + + H +L A N+L+ ++ ++AD+ L R +
Sbjct: 149 SKDLVSCAYQVARGMEYLASKKCI-HRDLAARNVLVTEDNV-MKIADFGLARDIHHIDYY 206
Query: 938 EQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISGEG-AGVD 995
++ + + + + APE + + +SDV++FGV+L E+ T + G GV
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEIFT-------LGGSPYPGVP 257
Query: 996 LTDWMQLKVAEGHGSDCFDAAVMPEMVNPAAEKGMKEVLGIALRCIRSV-SERPGIKTIY 1054
+ + +L + EGH D E+ + C +V S+RP K +
Sbjct: 258 VEELFKL-LKEGHRMD-------------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303
Query: 1055 EDLSSI 1060
EDL I
Sbjct: 304 EDLDRI 309
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
+ HPNVV L P + ++ + ++ G + P K PL+ Q D
Sbjct: 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV----PTLK--PLSEDQARFYFQD 145
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ +G+ YLH+ + + H ++K +N+L+ G D + ++AD+ + + + G
Sbjct: 146 LIKGIEYLHYQKII-HRDIKPSNLLV-GEDGHIKIADFGVSNEFKGSDALLSNT-VGTPA 202
Query: 948 YRAPE-LAASKKPHPSFKSDVYAFGVILLELLTGRC 982
+ APE L+ ++K DV+A GV L + G+C
Sbjct: 203 FMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQC 238
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
+RHP+++ L Y ++ E +++ +Y + L ++ R ++ + + +
Sbjct: 70 LRHPHIIKL--YDVIKSKDEIIMVIEY-AGNELFDYIVQRD-----KMSEQEARRFFQQI 121
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ Y H + V H +LK N+LLD LN ++AD+ L +MT ++ G Y
Sbjct: 122 ISAVEYCHRHKIV-HRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKT--SCGSPNY 177
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGD 985
APE+ S K + + DV++ GVIL +L R D
Sbjct: 178 AAPEV-ISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 43/246 (17%)
Query: 830 RHPNVVGLRGYYWGPTQHEKL-ILSDYISPGSLASFLYDR--PGRK---------GPPLT 877
+H N++ L G TQ L ++ +Y S G+L +L R PG + +T
Sbjct: 99 KHKNIIHLLG---ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 878 WAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTI 937
+ + +ARG+ YL + + H +L A N+L+ ++ ++AD+ L R +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNV-MKIADFGLARDINNIDYY 213
Query: 938 EQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISGEG-AGVD 995
++ + + + + APE + + +SDV++FGV++ E+ T + G G+
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEIFT-------LGGSPYPGIP 264
Query: 996 LTDWMQLKVAEGHGSDCFDAAVMPEMVNPAAEKGMKEVLGIALRCIRSV-SERPGIKTIY 1054
+ + +L + EGH M PA E+ + C +V S+RP K +
Sbjct: 265 VEELFKL-LKEGH-----------RMDKPA--NCTNELYMMMRDCWHAVPSQRPTFKQLV 310
Query: 1055 EDLSSI 1060
EDL I
Sbjct: 311 EDLDRI 316
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
I+HPN+V L Y H LI+ +S G L+DR KG T ++ V
Sbjct: 73 IKHPNIVALDDIY-ESGGHLYLIMQ-LVSGGE----LFDRIVEKG-FYTERDASRLIFQV 125
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNAR--VADYCLHRLMTQAGTIEQILDAGVL 946
+ YLH D + H +LK N+L D +++ ++D+ L + M G++ G
Sbjct: 126 LDAVKYLH-DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPGSVLSTA-CGTP 182
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
GY APE+ A +KP+ S D ++ GVI LL G
Sbjct: 183 GYVAPEVLA-QKPY-SKAVDCWSIGVIAYILLCG 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
I+HPN+V L Y H LI+ +S G L+DR KG T ++ V
Sbjct: 73 IKHPNIVALDDIY-ESGGHLYLIMQ-LVSGGE----LFDRIVEKG-FYTERDASRLIFQV 125
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNAR--VADYCLHRLMTQAGTIEQILDAGVL 946
+ YLH D + H +LK N+L D +++ ++D+ L + M G++ G
Sbjct: 126 LDAVKYLH-DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPGSVLSTA-CGTP 182
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
GY APE+ A +KP+ S D ++ GVI LL G
Sbjct: 183 GYVAPEVLA-QKPY-SKAVDCWSIGVIAYILLCG 214
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
I+HPN+V L Y H LI+ +S G L+DR KG T ++ V
Sbjct: 73 IKHPNIVALDDIY-ESGGHLYLIMQ-LVSGGE----LFDRIVEKG-FYTERDASRLIFQV 125
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNAR--VADYCLHRLMTQAGTIEQILDAGVL 946
+ YLH D + H +LK N+L D +++ ++D+ L + M G++ G
Sbjct: 126 LDAVKYLH-DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPGSVLSTA-CGTP 182
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
GY APE+ A +KP+ S D ++ GVI LL G
Sbjct: 183 GYVAPEVLA-QKPY-SKAVDCWSIGVIAYILLCG 214
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
I+HPN+V L Y H LI+ +S G L+DR KG T ++ V
Sbjct: 73 IKHPNIVALDDIY-ESGGHLYLIMQ-LVSGGE----LFDRIVEKG-FYTERDASRLIFQV 125
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNAR--VADYCLHRLMTQAGTIEQILDAGVL 946
+ YLH D + H +LK N+L D +++ ++D+ L + M G++ G
Sbjct: 126 LDAVKYLH-DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPGSVLSTA-CGTP 182
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
GY APE+ A +KP+ S D ++ GVI LL G
Sbjct: 183 GYVAPEVLA-QKPY-SKAVDCWSIGVIAYILLCG 214
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 773 PEELSRAPAEVLGRSSHGTSYRATL-ENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRH 831
P+E+S +V+G S G Y+A L ++G + +K V + + + H
Sbjct: 29 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDH 84
Query: 832 PNVVGLRGYYWGPTQHEKLI----LSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
N+V LR +++ + + + + DY+ + ++ P+ + +
Sbjct: 85 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQ 142
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY-CLHRLMTQAGTIEQILDAGVL 946
+ R L Y+H + H ++K N+LLD ++ D+ +L+ + I
Sbjct: 143 LFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR--- 198
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPEL + S DV++ G +L ELL G+
Sbjct: 199 YYRAPELIFGATDYTS-SIDVWSAGCVLAELLLGQ 232
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 883 KIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILD 942
KIAV + + L +LH +V H ++K +N+L++ ++ D+ + + ++ + +D
Sbjct: 157 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALG-QVKMCDFGISGYLVD--SVAKTID 213
Query: 943 AGVLGYRAPELAASK--KPHPSFKSDVYAFGVILLEL 977
AG Y APE + + S KSD+++ G+ ++EL
Sbjct: 214 AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 17/215 (7%)
Query: 773 PEELSRAPAEVLGRSSHGTSYRATL-ENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRH 831
P+E+S +V+G S G Y+A L ++G + +K V + + + H
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDH 72
Query: 832 PNVVGLRGYYWGPTQHEKLI----LSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
N+V LR +++ + + ++ + DY+ + ++ P+ + +
Sbjct: 73 CNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQ 130
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY-CLHRLMTQAGTIEQILDAGVL 946
+ R L Y+H + H ++K N+LLD ++ D+ +L+ + I
Sbjct: 131 LFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR--- 186
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPEL + S DV++ G +L ELL G+
Sbjct: 187 YYRAPELIFGATDYTS-SIDVWSAGCVLAELLLGQ 220
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 72/137 (52%), Gaps = 16/137 (11%)
Query: 850 LILSDYISPGSLASFLY-------DRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVP 902
L++ + ++ G L S+L + PGR PP T + +++A ++A G+ YL+ + V
Sbjct: 97 LVVMELMAHGDLKSYLRSLRPEAENNPGR--PPPTLQEMIQMAAEIADGMAYLNAKKFV- 153
Query: 903 HGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPH 960
H NL A N ++ D ++ D+ + R + + + G+L R APE + K
Sbjct: 154 HRNLAARNCMV-AHDFTVKIGDFGMTRDIYETDYYRK-GGKGLLPVRWMAPE--SLKDGV 209
Query: 961 PSFKSDVYAFGVILLEL 977
+ SD+++FGV+L E+
Sbjct: 210 FTTSSDMWSFGVVLWEI 226
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 72/137 (52%), Gaps = 16/137 (11%)
Query: 850 LILSDYISPGSLASFLY-------DRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVP 902
L++ + ++ G L S+L + PGR PP T + +++A ++A G+ YL+ + V
Sbjct: 96 LVVMELMAHGDLKSYLRSLRPEAENNPGR--PPPTLQEMIQMAAEIADGMAYLNAKKFV- 152
Query: 903 HGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPH 960
H NL A N ++ D ++ D+ + R + + + G+L R APE + K
Sbjct: 153 HRNLAARNCMV-AHDFTVKIGDFGMTRDIYETDYYRKG-GKGLLPVRWMAPE--SLKDGV 208
Query: 961 PSFKSDVYAFGVILLEL 977
+ SD+++FGV+L E+
Sbjct: 209 FTTSSDMWSFGVVLWEI 225
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 773 PEELSRAPAEVLGRSSHGTSYRATL-ENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRH 831
P+E+S +V+G S G Y+A L ++G + +K V + + + H
Sbjct: 21 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDH 76
Query: 832 PNVVGLRGYYWGPTQHEKLI----LSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
N+V LR +++ + + + + DY+ + ++ P+ + +
Sbjct: 77 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQ 134
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY-CLHRLMTQAGTIEQILDAGVL 946
+ R L Y+H + H ++K N+LLD ++ D+ +L+ + I
Sbjct: 135 LFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR--- 190
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPEL + S DV++ G +L ELL G+
Sbjct: 191 YYRAPELIFGATDYTS-SIDVWSAGCVLAELLLGQ 224
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 885 AVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY--CLHRLMTQAGTIEQILD 942
A ++ GL +LH + + + +LK NILLD D + ++AD+ C ++ A T E
Sbjct: 125 AAEIILGLQFLH-SKGIVYRDLKLDNILLD-KDGHIKIADFGMCKENMLGDAKTNEF--- 179
Query: 943 AGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
G Y APE+ +K + S D ++FGV+L E+L G+
Sbjct: 180 CGTPDYIAPEILLGQKYNHSV--DWWSFGVLLYEMLIGQ 216
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
+RHP+++ L Y ++ E +++ +Y + L ++ R ++ + + +
Sbjct: 65 LRHPHIIKL--YDVIKSKDEIIMVIEY-AGNELFDYIVQRDK-----MSEQEARRFFQQI 116
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ Y H + V H +LK N+LLD LN ++AD+ L +MT ++ G Y
Sbjct: 117 ISAVEYCHRHKIV-HRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKT--SCGSPNY 172
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGD 985
APE+ S K + + DV++ GVIL +L R D
Sbjct: 173 AAPEV-ISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 773 PEELSRAPAEVLGRSSHGTSYRATL-ENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRH 831
P+E+S +V+G S G Y+A L ++G + +K V + + + H
Sbjct: 36 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDH 91
Query: 832 PNVVGLRGYYWGPTQHEKLI----LSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
N+V LR +++ + + + + DY+ + ++ P+ + +
Sbjct: 92 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQ 149
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY-CLHRLMTQAGTIEQILDAGVL 946
+ R L Y+H + H ++K N+LLD ++ D+ +L+ + I
Sbjct: 150 LFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR--- 205
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPEL + S DV++ G +L ELL G+
Sbjct: 206 YYRAPELIFGATDYTS-SIDVWSAGCVLAELLLGQ 239
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 115/276 (41%), Gaps = 45/276 (16%)
Query: 85 ADLSVFSNLSMLVKLSMSNNSISGVIP--------------------DNIGDFKSLEFLD 124
D++ NL+ LV + M+NN I+ + P D + + +L L+
Sbjct: 76 TDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLE 135
Query: 125 VSDNLFSSSLPSGIGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPP 184
+S N S S + L SLQ LS + N + L P ++ L +++ LD+S N S
Sbjct: 136 LSSNTISD--ISALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSD--IS 189
Query: 185 ALTRXXXXXXXXXXXXGFSKRIPRGFELILGLQVLDFHGNKLDGHLDGEFFLLTNASHID 244
L + S P G ++ L L +GN+L G LTN + +D
Sbjct: 190 VLAKLTNLESLIATNNQISDITPLG--ILTNLDELSLNGNQLKDI--GTLASLTNLTDLD 245
Query: 245 FSGNMFVGSSSQKFLPGLSQ----SVQYLNLS----LNQLTGSLVNGGELQL------FE 290
+ N + L L++ + Q N+S L LT +N +L+ +
Sbjct: 246 LANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLK 305
Query: 291 NLKVLDLSYNQLTGELPGFNFVYELQVLKLSNNRFS 326
NL L L +N ++ P + + +LQ L SNN+ S
Sbjct: 306 NLTYLTLYFNNISDISP-VSSLTKLQRLFFSNNKVS 340
Score = 30.0 bits (66), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 14/206 (6%)
Query: 362 NLHMLNLSSNGLTGELPLLTGSCAVLDLSNNQFEGNLSRILKWGNIEYLDLSRNHLTGSI 421
NL +N S+N LT PL + V L NN +++ + N+ L L N +T
Sbjct: 64 NLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDID 123
Query: 422 PEETPQFLRXXXXXXXXXXXXXXXPKVIIQYQKLRVLDLSFNHLDGPFLTNLLNSSTLQE 481
P + L + Q LSF+ L L N +TL+
Sbjct: 124 PLKNLTNLNRLELSSNTISDISALSGLTSLQQ------LSFSSNQVTDLKPLANLTTLER 177
Query: 482 LHLADNLLTGVLDFSP-PSVSNLQVLDLSHNRLNGYFPDRLGSLTGLKVLCLAGNNISGS 540
L ++ N V D S ++NL+ L ++N+++ P LG LT L L L GN +
Sbjct: 178 LDISSN---KVSDISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD- 231
Query: 541 LPTSMANMTSLSSLVISQNHFTGPLP 566
++A++T+L+ L ++ N + P
Sbjct: 232 -IGTLASLTNLTDLDLANNQISNLAP 256
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 773 PEELSRAPAEVLGRSSHGTSYRATL-ENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRH 831
P+E+S +V+G S G Y+A L ++G + +K V + + + H
Sbjct: 25 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDH 80
Query: 832 PNVVGLRGYYWGPTQHEKLI----LSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
N+V LR +++ + + + + DY+ + ++ P+ + +
Sbjct: 81 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQ 138
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY-CLHRLMTQAGTIEQILDAGVL 946
+ R L Y+H + H ++K N+LLD ++ D+ +L+ + I
Sbjct: 139 LFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR--- 194
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPEL + S DV++ G +L ELL G+
Sbjct: 195 YYRAPELIFGATDYTS-SIDVWSAGCVLAELLLGQ 228
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 43/246 (17%)
Query: 830 RHPNVVGLRGYYWGPTQHEKL-ILSDYISPGSLASFLYDR--PGRK---------GPPLT 877
+H N++ L G TQ L ++ Y S G+L +L R PG + +T
Sbjct: 99 KHKNIINLLG---ACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 878 WAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTI 937
+ + +ARG+ YL + + H +L A N+L+ ++ ++AD+ L R +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNV-MKIADFGLARDINNIDYY 213
Query: 938 EQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISGEG-AGVD 995
++ + + + + APE + + +SDV++FGV++ E+ T + G G+
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEIFT-------LGGSPYPGIP 264
Query: 996 LTDWMQLKVAEGHGSDCFDAAVMPEMVNPAAEKGMKEVLGIALRCIRSV-SERPGIKTIY 1054
+ + +L + EGH M PA E+ + C +V S+RP K +
Sbjct: 265 VEELFKL-LKEGH-----------RMDKPA--NCTNELYMMMRDCWHAVPSQRPTFKQLV 310
Query: 1055 EDLSSI 1060
EDL I
Sbjct: 311 EDLDRI 316
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 828 NIRHPNVVGLRGYYWGPTQH---EKLILSDYISPGSLASFL-YDR--PGRKGPPLTWAQR 881
+ HPNV+ L G + + +++ ++ G L ++L Y R G K PL
Sbjct: 92 DFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPL--QTL 149
Query: 882 LKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQIL 941
LK VD+A G+ YL +R H +L A N +L D+ VAD+ L + + Q
Sbjct: 150 LKFMVDIALGMEYLS-NRNFLHRDLAARNCMLRD-DMTVCVADFGLSKKIYSGDYYRQGR 207
Query: 942 DAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
A + + + A E A + + KSDV+AFGV + E+ T
Sbjct: 208 IAKMPVKWIAIESLADRVY--TSKSDVWAFGVTMWEIAT 244
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 773 PEELSRAPAEVLGRSSHGTSYRATL-ENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRH 831
P+E+S +V+G S G Y+A L ++G + +K V + + + H
Sbjct: 29 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDH 84
Query: 832 PNVVGLRGYYWGPTQHEKLI----LSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
N+V LR +++ + + + + DY+ + ++ P+ + +
Sbjct: 85 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQ 142
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY-CLHRLMTQAGTIEQILDAGVL 946
+ R L Y+H + H ++K N+LLD ++ D+ +L+ + I
Sbjct: 143 LFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR--- 198
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPEL + S DV++ G +L ELL G+
Sbjct: 199 YYRAPELIFGATDYTS-SIDVWSAGCVLAELLLGQ 232
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 773 PEELSRAPAEVLGRSSHGTSYRATL-ENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRH 831
P+E+S +V+G S G Y+A L ++G + +K V + + + H
Sbjct: 45 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDH 100
Query: 832 PNVVGLRGYYWGPTQHEKLI----LSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
N+V LR +++ + + + + DY+ + ++ P+ + +
Sbjct: 101 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQ 158
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY-CLHRLMTQAGTIEQILDAGVL 946
+ R L Y+H + H ++K N+LLD ++ D+ +L+ + I
Sbjct: 159 LFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR--- 214
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPEL + S DV++ G +L ELL G+
Sbjct: 215 YYRAPELIFGATDYTS-SIDVWSAGCVLAELLLGQ 248
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 773 PEELSRAPAEVLGRSSHGTSYRATL-ENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRH 831
P+E+S +V+G S G Y+A L ++G + +K V + + + H
Sbjct: 22 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDH 77
Query: 832 PNVVGLRGYYWGPTQHEKLI----LSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
N+V LR +++ + + + + DY+ + ++ P+ + +
Sbjct: 78 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQ 135
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY-CLHRLMTQAGTIEQILDAGVL 946
+ R L Y+H + H ++K N+LLD ++ D+ +L+ + I
Sbjct: 136 LFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR--- 191
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPEL + S DV++ G +L ELL G+
Sbjct: 192 YYRAPELIFGATDYTS-SIDVWSAGCVLAELLLGQ 225
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 6/135 (4%)
Query: 849 KLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLNYLHFDRAVPHGNL 906
+ IL + ++ G L SFL + R P L L +A D+A G YL + + H ++
Sbjct: 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDI 207
Query: 907 KATNILLD--GPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFK 964
A N LL GP A++ D+ + R + +AG + A + P A + S K
Sbjct: 208 AARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTS-K 266
Query: 965 SDVYAFGVILLELLT 979
+D ++FGV+L E+ +
Sbjct: 267 TDTWSFGVLLWEIFS 281
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 875 PLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQA 934
P+T + +++ D + LN+ H + H ++K NIL+ + +V D+ + R + +
Sbjct: 112 PMTPKRAIEVIADACQALNFSH-QNGIIHRDVKPANILISATNA-VKVVDFGIARAIADS 169
Query: 935 G-TIEQILDAGVLG---YRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
G ++ Q A V+G Y +PE A + +SDVY+ G +L E+LTG
Sbjct: 170 GNSVXQT--AAVIGTAQYLSPEQA--RGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 6/135 (4%)
Query: 849 KLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLNYLHFDRAVPHGNL 906
+ IL + ++ G L SFL + R P L L +A D+A G YL + + H ++
Sbjct: 126 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDI 184
Query: 907 KATNILLD--GPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFK 964
A N LL GP A++ D+ + R + +AG + A + P A + S K
Sbjct: 185 AARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTS-K 243
Query: 965 SDVYAFGVILLELLT 979
+D ++FGV+L E+ +
Sbjct: 244 TDTWSFGVLLWEIFS 258
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 782 EVLGRSSHGTSYRATL----EN-GMFLTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVV 835
+VLG + GT Y+ EN + + +K LRE + K + P V
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLN 893
L G T +++ + G L + + GR G L W + +A+G++
Sbjct: 83 RLLGICLTSTVQ---LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQ------IAKGMS 133
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
YL R V H +L A N+L+ P+ + ++ D+ L RL+ T E D G + + L
Sbjct: 134 YLEDVRLV-HRDLAARNVLVKSPN-HVKITDFGLARLLDIDET-EYHADGGKVPIKWMAL 190
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
+ + + +SDV+++GV + EL+T
Sbjct: 191 ESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 43/246 (17%)
Query: 830 RHPNVVGLRGYYWGPTQHEKL-ILSDYISPGSLASFLYDR--PGRK---------GPPLT 877
+H N++ L G TQ L ++ Y S G+L +L R PG + +T
Sbjct: 99 KHKNIINLLG---ACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 878 WAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTI 937
+ + +ARG+ YL + + H +L A N+L+ ++ ++AD+ L R +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNV-MKIADFGLARDINNIDYY 213
Query: 938 EQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISGEG-AGVD 995
++ + + + + APE + + +SDV++FGV++ E+ T + G G+
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEIFT-------LGGSPYPGIP 264
Query: 996 LTDWMQLKVAEGHGSDCFDAAVMPEMVNPAAEKGMKEVLGIALRCIRSV-SERPGIKTIY 1054
+ + +L + EGH M PA E+ + C +V S+RP K +
Sbjct: 265 VEELFKL-LKEGH-----------RMDKPA--NCTNELYMMMRDCWHAVPSQRPTFKQLV 310
Query: 1055 EDLSSI 1060
EDL I
Sbjct: 311 EDLDRI 316
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 773 PEELSRAPAEVLGRSSHGTSYRATL-ENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRH 831
P+E+S +V+G S G Y+A L ++G + +K V + + + H
Sbjct: 30 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDH 85
Query: 832 PNVVGLRGYYWGPTQHEKLI----LSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
N+V LR +++ + + + + DY+ + ++ P+ + +
Sbjct: 86 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQ 143
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY-CLHRLMTQAGTIEQILDAGVL 946
+ R L Y+H + H ++K N+LLD ++ D+ +L+ + I
Sbjct: 144 LFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR--- 199
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPEL + S DV++ G +L ELL G+
Sbjct: 200 YYRAPELIFGATDYTS-SIDVWSAGCVLAELLLGQ 233
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 773 PEELSRAPAEVLGRSSHGTSYRATL-ENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRH 831
P+E+S +V+G S G Y+A L ++G + +K V + + + H
Sbjct: 51 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDH 106
Query: 832 PNVVGLRGYYWGPTQHEKLI----LSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
N+V LR +++ + + + + DY+ + ++ P+ + +
Sbjct: 107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQ 164
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY-CLHRLMTQAGTIEQILDAGVL 946
+ R L Y+H + H ++K N+LLD ++ D+ +L+ + I
Sbjct: 165 LFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR--- 220
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPEL + S DV++ G +L ELL G+
Sbjct: 221 YYRAPELIFGATDYTS-SIDVWSAGCVLAELLLGQ 254
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 72/137 (52%), Gaps = 16/137 (11%)
Query: 850 LILSDYISPGSLASFLY-------DRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVP 902
L++ + ++ G L S+L + PGR PP T + +++A ++A G+ YL+ + V
Sbjct: 93 LVVMELMAHGDLKSYLRSLRPEAENNPGR--PPPTLQEMIQMAAEIADGMAYLNAKKFV- 149
Query: 903 HGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPH 960
H +L A N ++ D ++ D+ + R + + + G+L R APE + K
Sbjct: 150 HRDLAARNCMV-AHDFTVKIGDFGMTRDIXETDXXRKG-GKGLLPVRWMAPE--SLKDGV 205
Query: 961 PSFKSDVYAFGVILLEL 977
+ SD+++FGV+L E+
Sbjct: 206 FTTSSDMWSFGVVLWEI 222
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 12/142 (8%)
Query: 840 YYWGPTQHEKL-ILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFD 898
YY + KL I+ +Y+ GS L PG PL Q I ++ +GL+YLH +
Sbjct: 70 YYGSYLKDTKLWIIMEYLGGGSALDLL--EPG----PLDETQIATILREILKGLDYLHSE 123
Query: 899 RAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKK 958
+ + H ++KA N+LL ++AD+ + +T I++ G + APE+ K+
Sbjct: 124 KKI-HRDIKAANVLLSEHG-EVKLADFGVAGQLTDT-QIKRNXFVGTPFWMAPEVI--KQ 178
Query: 959 PHPSFKSDVYAFGVILLELLTG 980
K+D+++ G+ +EL G
Sbjct: 179 SAYDSKADIWSLGITAIELARG 200
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 89 VFSNLSMLVKLSMSNNSIS-GVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNL 147
+F+ LS L L M+ NS +PD + ++L FLD+S P+ L SLQ L
Sbjct: 464 IFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 523
Query: 148 SLAGNNFSGLIPDSVSGLVSIQSLDLSHN 176
+++ NNF L L S+Q LD S N
Sbjct: 524 NMSHNNFFSLDTFPYKCLNSLQVLDYSLN 552
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 29/171 (16%)
Query: 455 LRVLDLSFNHLDGPFLTNLLNSSTLQELHLADNLLTGVLDFSP-PSVSNLQVLDLSHNRL 513
L+ LDLSFN + +N L L+ L + L + +FS S+ NL LD+SH
Sbjct: 399 LKYLDLSFNGV-ITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHT 457
Query: 514 NGYFPDRLGSLTGLKVLCLAGNNISGSL-------------------------PTSMANM 548
F L+ L+VL +AGN+ + PT+ ++
Sbjct: 458 RVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSL 517
Query: 549 TSLSSLVISQNHFTG--PLPNNLPNSLETFNVSYNDFSGAVPENLRKFPSS 597
+SL L +S N+F P NSL+ + S N + + L+ FPSS
Sbjct: 518 SSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSS 568
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 7/126 (5%)
Query: 60 SWNGIVCNGGNVAGV-VLDNL-----GLSAAADLSVFSNLSMLVKLSMSNNSISGVIPDN 113
S+NG++ N G+ L++L L ++ SVF +L L+ L +S+
Sbjct: 405 SFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGI 464
Query: 114 IGDFKSLEFLDVSDNLFSSS-LPSGIGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLD 172
SLE L ++ N F + LP +L +L L L+ L P + + L S+Q L+
Sbjct: 465 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 524
Query: 173 LSHNSF 178
+SHN+F
Sbjct: 525 MSHNNF 530
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 92/236 (38%), Gaps = 36/236 (15%)
Query: 363 LHMLNLSSNGLT-----GELPLLTGSCAVLDLSNNQFEGNLSRILKWGNIEYLDLSRNHL 417
L L+LS NGL+ + T S LDLS N S L +E+LD ++L
Sbjct: 373 LEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNL 432
Query: 418 TGSIPEETPQFLRXXXXXXXXXXXXXXXPKVIIQYQKLRVLDLSFNHLDGPFLTNLLNSS 477
++ +F V + + L LD+S H F S
Sbjct: 433 -----KQMSEF------------------SVFLSLRNLIYLDISHTHTRVAFNGIFNGLS 469
Query: 478 TLQELHLADNLLTGVLDFSP---PSVSNLQVLDLSHNRLNGYFPDRLGSLTGLKVLCLAG 534
+L+ L +A N +F P + NL LDLS +L P SL+ L+VL ++
Sbjct: 470 SLEVLKMAGNSFQE--NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 527
Query: 535 NNISGSLPTSMANMTSLSSLVISQNHFTGPLPNNL---PNSLETFNVSYNDFSGAV 587
NN + SL L S NH L P+SL N++ NDF+
Sbjct: 528 NNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 583
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 773 PEELSRAPAEVLGRSSHGTSYRATL-ENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRH 831
P+E+S +V+G S G Y+A L ++G + +K V + + + H
Sbjct: 96 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDH 151
Query: 832 PNVVGLRGYYWGPTQHEKLI----LSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
N+V LR +++ + + + + DY+ + ++ P+ + +
Sbjct: 152 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQ 209
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY-CLHRLMTQAGTIEQILDAGVL 946
+ R L Y+H + H ++K N+LLD ++ D+ +L+ + I
Sbjct: 210 LFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR--- 265
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPEL + S DV++ G +L ELL G+
Sbjct: 266 YYRAPELIFGATDYTS-SIDVWSAGCVLAELLLGQ 299
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 12/142 (8%)
Query: 840 YYWGPTQHEKL-ILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFD 898
YY + KL I+ +Y+ GS L PG PL Q I ++ +GL+YLH +
Sbjct: 70 YYGSYLKDTKLWIIMEYLGGGSALDLL--EPG----PLDETQIATILREILKGLDYLHSE 123
Query: 899 RAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKK 958
+ + H ++KA N+LL ++AD+ + +T I++ G + APE+ K+
Sbjct: 124 KKI-HRDIKAANVLLSEHG-EVKLADFGVAGQLTDT-QIKRNTFVGTPFWMAPEVI--KQ 178
Query: 959 PHPSFKSDVYAFGVILLELLTG 980
K+D+++ G+ +EL G
Sbjct: 179 SAYDSKADIWSLGITAIELARG 200
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 72/137 (52%), Gaps = 16/137 (11%)
Query: 850 LILSDYISPGSLASFLY-------DRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVP 902
L++ + ++ G L S+L + PGR PP T + +++A ++A G+ YL+ + V
Sbjct: 96 LVVMELMAHGDLKSYLRSLRPEAENNPGR--PPPTLQEMIQMAAEIADGMAYLNAKKFV- 152
Query: 903 HGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPH 960
H +L A N ++ D ++ D+ + R + + + G+L R APE + K
Sbjct: 153 HRDLAARNCMV-AHDFTVKIGDFGMTRDIXETDXXRK-GGKGLLPVRWMAPE--SLKDGV 208
Query: 961 PSFKSDVYAFGVILLEL 977
+ SD+++FGV+L E+
Sbjct: 209 FTTSSDMWSFGVVLWEI 225
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 89 VFSNLSMLVKLSMSNNSIS-GVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNL 147
+F+ LS L L M+ NS +PD + ++L FLD+S P+ L SLQ L
Sbjct: 440 IFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 499
Query: 148 SLAGNNFSGLIPDSVSGLVSIQSLDLSHN 176
+++ NNF L L S+Q LD S N
Sbjct: 500 NMSHNNFFSLDTFPYKCLNSLQVLDYSLN 528
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 29/171 (16%)
Query: 455 LRVLDLSFNHLDGPFLTNLLNSSTLQELHLADNLLTGVLDFSP-PSVSNLQVLDLSHNRL 513
L+ LDLSFN + +N L L+ L + L + +FS S+ NL LD+SH
Sbjct: 375 LKYLDLSFNGV-ITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHT 433
Query: 514 NGYFPDRLGSLTGLKVLCLAGNNISGSL-------------------------PTSMANM 548
F L+ L+VL +AGN+ + PT+ ++
Sbjct: 434 RVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSL 493
Query: 549 TSLSSLVISQNHFTG--PLPNNLPNSLETFNVSYNDFSGAVPENLRKFPSS 597
+SL L +S N+F P NSL+ + S N + + L+ FPSS
Sbjct: 494 SSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSS 544
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 21/148 (14%)
Query: 52 IDFDGCPS--------------SWNGIVCNGGNVAGV-VLDNL-----GLSAAADLSVFS 91
+ F GC S S+NG++ N G+ L++L L ++ SVF
Sbjct: 359 LSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFL 418
Query: 92 NLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSS-LPSGIGKLESLQNLSLA 150
+L L+ L +S+ SLE L ++ N F + LP +L +L L L+
Sbjct: 419 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 478
Query: 151 GNNFSGLIPDSVSGLVSIQSLDLSHNSF 178
L P + + L S+Q L++SHN+F
Sbjct: 479 QCQLEQLSPTAFNSLSSLQVLNMSHNNF 506
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 92/236 (38%), Gaps = 36/236 (15%)
Query: 363 LHMLNLSSNGLT-----GELPLLTGSCAVLDLSNNQFEGNLSRILKWGNIEYLDLSRNHL 417
L L+LS NGL+ + T S LDLS N S L +E+LD ++L
Sbjct: 349 LEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNL 408
Query: 418 TGSIPEETPQFLRXXXXXXXXXXXXXXXPKVIIQYQKLRVLDLSFNHLDGPFLTNLLNSS 477
++ +F V + + L LD+S H F S
Sbjct: 409 -----KQMSEF------------------SVFLSLRNLIYLDISHTHTRVAFNGIFNGLS 445
Query: 478 TLQELHLADNLLTGVLDFSP---PSVSNLQVLDLSHNRLNGYFPDRLGSLTGLKVLCLAG 534
+L+ L +A N +F P + NL LDLS +L P SL+ L+VL ++
Sbjct: 446 SLEVLKMAGNSFQE--NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 503
Query: 535 NNISGSLPTSMANMTSLSSLVISQNHFTGPLPNNL---PNSLETFNVSYNDFSGAV 587
NN + SL L S NH L P+SL N++ NDF+
Sbjct: 504 NNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 559
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 11/105 (10%)
Query: 880 QRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY--CLHRLMTQAGTI 937
Q + A +++ GL +LH R + + +LK N++LD + + ++AD+ C +M T
Sbjct: 121 QAVFYAAEISIGLFFLH-KRGIIYRDLKLDNVMLDS-EGHIKIADFGMCKEHMMDGVTTR 178
Query: 938 EQILDAGVLGYRAPELAASKKPHPSFKS-DVYAFGVILLELLTGR 981
E G Y APE+ A + P KS D +A+GV+L E+L G+
Sbjct: 179 EF---CGTPDYIAPEIIAYQ---PYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 72/137 (52%), Gaps = 16/137 (11%)
Query: 850 LILSDYISPGSLASFLY-------DRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVP 902
L++ + ++ G L S+L + PGR PP T + +++A ++A G+ YL+ + V
Sbjct: 96 LVVMELMAHGDLKSYLRSLRPEAENNPGR--PPPTLQEMIQMAAEIADGMAYLNAKKFV- 152
Query: 903 HGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPH 960
H +L A N ++ D ++ D+ + R + + + G+L R APE + K
Sbjct: 153 HRDLAARNCMV-AHDFTVKIGDFGMTRDIXETDXXRK-GGKGLLPVRWMAPE--SLKDGV 208
Query: 961 PSFKSDVYAFGVILLEL 977
+ SD+++FGV+L E+
Sbjct: 209 FTTSSDMWSFGVVLWEI 225
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 19/216 (8%)
Query: 773 PEELSRAPAEVLGRSSHGTSYRATL-ENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRH 831
P+E+S +V+G S G Y+A L ++G + +K V + + + H
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDH 72
Query: 832 PNVVGLRGYYWGPTQHE-----KLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAV 886
N+V LR +++ + + L+L DY+ + ++ P+ + +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVL-DYVPETVYRVARHYSRAKQTLPVIYVKLY--MY 129
Query: 887 DVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY-CLHRLMTQAGTIEQILDAGV 945
+ R L Y+H + H ++K N+LLD ++ D+ +L+ + I
Sbjct: 130 QLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-- 186
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPEL + S DV++ G +L ELL G+
Sbjct: 187 -YYRAPELIFGATDYTS-SIDVWSAGCVLAELLLGQ 220
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 17/158 (10%)
Query: 829 IRHPNVVGL--RGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAV 886
+ HP +V + G P I+ +Y+ +L ++ P+T + +++
Sbjct: 86 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEVIA 140
Query: 887 DVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAG-TIEQILDAGV 945
D + LN+ H + H ++K NI++ + +V D+ + R + +G ++ Q A V
Sbjct: 141 DACQALNFSH-QNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQT--AAV 196
Query: 946 LG---YRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
+G Y +PE A + +SDVY+ G +L E+LTG
Sbjct: 197 IGTAQYLSPEQA--RGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 773 PEELSRAPAEVLGRSSHGTSYRATL-ENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRH 831
P+E+S +V+G S G Y+A L ++G + +K V + + + H
Sbjct: 51 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDH 106
Query: 832 PNVVGLRGYYWGPTQHEKLI----LSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
N+V LR +++ + + + + DY+ + ++ P+ + +
Sbjct: 107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQ 164
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY-CLHRLMTQAGTIEQILDAGVL 946
+ R L Y+H + H ++K N+LLD ++ D+ +L+ + I
Sbjct: 165 LFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR--- 220
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPEL + S DV++ G +L ELL G+
Sbjct: 221 YYRAPELIFGATDYTS-SIDVWSAGCVLAELLLGQ 254
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 773 PEELSRAPAEVLGRSSHGTSYRATL-ENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRH 831
P+E+S +V+G S G Y+A L ++G + +K V + + + H
Sbjct: 55 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDH 110
Query: 832 PNVVGLRGYYWGPTQHEKLI----LSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
N+V LR +++ + + + + DY+ + ++ P+ + +
Sbjct: 111 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQ 168
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY-CLHRLMTQAGTIEQILDAGVL 946
+ R L Y+H + H ++K N+LLD ++ D+ +L+ + I
Sbjct: 169 LFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR--- 224
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPEL + S DV++ G +L ELL G+
Sbjct: 225 YYRAPELIFGATDYTS-SIDVWSAGCVLAELLLGQ 258
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 22/187 (11%)
Query: 799 NGMFLTVKWLREGVA---KQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQ--HEKLILS 853
NG + +K L++ + KQ + HP ++ + WG Q + ++
Sbjct: 30 NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM----WGTFQDAQQIFMIM 85
Query: 854 DYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILL 913
DYI G L S L P + A +V L YLH + + + +LK NILL
Sbjct: 86 DYIEGGELFSLLRKSQRFPNPVAKF-----YAAEVCLALEYLH-SKDIIYRDLKPENILL 139
Query: 914 DGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFKSDVYAFGVI 973
D + + ++ D+ + + G Y APE+ ++K + S D ++FG++
Sbjct: 140 D-KNGHIKITDFGFAKYVPDV----TYXLCGTPDYIAPEVVSTKPYNKSI--DWWSFGIL 192
Query: 974 LLELLTG 980
+ E+L G
Sbjct: 193 IYEMLAG 199
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 72/137 (52%), Gaps = 16/137 (11%)
Query: 850 LILSDYISPGSLASFLY-------DRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVP 902
L++ + ++ G L S+L + PGR PP T + +++A ++A G+ YL+ + V
Sbjct: 96 LVVMELMAHGDLKSYLRSLRPEAENNPGR--PPPTLQEMIQMAAEIADGMAYLNAKKFV- 152
Query: 903 HGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPH 960
H +L A N ++ D ++ D+ + R + + + G+L R APE + K
Sbjct: 153 HRDLAARNCMV-AHDFTVKIGDFGMTRDIYETAYYRKG-GKGLLPVRWMAPE--SLKDGV 208
Query: 961 PSFKSDVYAFGVILLEL 977
+ SD+++FGV+L E+
Sbjct: 209 FTTSSDMWSFGVVLWEI 225
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 12/142 (8%)
Query: 840 YYWGPTQHEKL-ILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFD 898
YY + KL I+ +Y+ GS L PG PL Q I ++ +GL+YLH +
Sbjct: 85 YYGSYLKDTKLWIIMEYLGGGSALDLL--EPG----PLDETQIATILREILKGLDYLHSE 138
Query: 899 RAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKK 958
+ + H ++KA N+LL ++AD+ + +T I++ G + APE+ K+
Sbjct: 139 KKI-HRDIKAANVLLSEHG-EVKLADFGVAGQLTDT-QIKRNXFVGTPFWMAPEVI--KQ 193
Query: 959 PHPSFKSDVYAFGVILLELLTG 980
K+D+++ G+ +EL G
Sbjct: 194 SAYDSKADIWSLGITAIELARG 215
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 773 PEELSRAPAEVLGRSSHGTSYRATL-ENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRH 831
P+E+S +V+G S G Y+A L ++G + +K V + + + H
Sbjct: 53 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDH 108
Query: 832 PNVVGLRGYYWGPTQHEKLI----LSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
N+V LR +++ + + + + DY+ + ++ P+ + +
Sbjct: 109 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQ 166
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY-CLHRLMTQAGTIEQILDAGVL 946
+ R L Y+H + H ++K N+LLD ++ D+ +L+ + I
Sbjct: 167 LFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR--- 222
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPEL + S DV++ G +L ELL G+
Sbjct: 223 YYRAPELIFGATDYTS-SIDVWSAGCVLAELLLGQ 256
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 19/216 (8%)
Query: 773 PEELSRAPAEVLGRSSHGTSYRATL-ENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRH 831
P+E+S +V+G S G Y+A L ++G + +K V + + + H
Sbjct: 18 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDH 73
Query: 832 PNVVGLRGYYWGPTQHE-----KLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAV 886
N+V LR +++ + + L+L DY+ + ++ P+ + +
Sbjct: 74 CNIVRLRYFFYSSGEKKDEVYLNLVL-DYVPETVYRVARHYSRAKQTLPVIYVKLY--MY 130
Query: 887 DVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY-CLHRLMTQAGTIEQILDAGV 945
+ R L Y+H + H ++K N+LLD ++ D+ +L+ + I
Sbjct: 131 QLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-- 187
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPEL + S DV++ G +L ELL G+
Sbjct: 188 -YYRAPELIFGATDYTS-SIDVWSAGCVLAELLLGQ 221
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 19/216 (8%)
Query: 773 PEELSRAPAEVLGRSSHGTSYRATL-ENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRH 831
P+E+S +V+G S G Y+A L ++G + +K V + + + H
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDH 72
Query: 832 PNVVGLRGYYWGPTQHE-----KLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAV 886
N+V LR +++ + + L+L DY+ + ++ P+ + +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVL-DYVPETVYRVARHYSRAKQTLPVIYVKLY--MY 129
Query: 887 DVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY-CLHRLMTQAGTIEQILDAGV 945
+ R L Y+H + H ++K N+LLD ++ D+ +L+ + I
Sbjct: 130 QLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-- 186
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPEL + S DV++ G +L ELL G+
Sbjct: 187 -YYRAPELIFGATDYTS-SIDVWSAGCVLAELLLGQ 220
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 5/107 (4%)
Query: 874 PPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQ 933
PPL+ A++L IA VA G+ YL +R H +L N L+ G ++ ++AD+ L R +
Sbjct: 169 PPLSCAEQLCIARQVAAGMAYLS-ERKFVHRDLATRNCLV-GENMVVKIADFGLSRNIYS 226
Query: 934 AGTIEQI-LDAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
A + DA + + PE + + +SDV+A+GV+L E+ +
Sbjct: 227 ADYYKADGNDAIPIRWMPPESIFYNRY--TTESDVWAYGVVLWEIFS 271
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 12/142 (8%)
Query: 840 YYWGPTQHEKL-ILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFD 898
YY + KL I+ +Y+ GS L PG PL Q I ++ +GL+YLH +
Sbjct: 90 YYGSYLKDTKLWIIMEYLGGGSALDLL--EPG----PLDETQIATILREILKGLDYLHSE 143
Query: 899 RAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKK 958
+ + H ++KA N+LL ++AD+ + +T I++ G + APE+ K+
Sbjct: 144 KKI-HRDIKAANVLLSEHG-EVKLADFGVAGQLTDT-QIKRNTFVGTPFWMAPEVI--KQ 198
Query: 959 PHPSFKSDVYAFGVILLELLTG 980
K+D+++ G+ +EL G
Sbjct: 199 SAYDSKADIWSLGITAIELARG 220
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 19/216 (8%)
Query: 773 PEELSRAPAEVLGRSSHGTSYRATL-ENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRH 831
P+E+S +V+G S G Y+A L ++G + +K V + + + H
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDH 72
Query: 832 PNVVGLRGYYWGPTQHE-----KLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAV 886
N+V LR +++ + + L+L DY+ + ++ P+ + +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVL-DYVPETVYRVARHYSRAKQTLPVIYVKLY--MY 129
Query: 887 DVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY-CLHRLMTQAGTIEQILDAGV 945
+ R L Y+H + H ++K N+LLD ++ D+ +L+ + I
Sbjct: 130 QLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-- 186
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPEL + S DV++ G +L ELL G+
Sbjct: 187 -YYRAPELIFGATDYTS-SIDVWSAGCVLAELLLGQ 220
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 882 LKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQIL 941
L V +A+G+NYL DR + H +L A N+L+ P + ++ D+ L +L+ A E
Sbjct: 154 LNWCVQIAKGMNYLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLG-AEEKEYHA 210
Query: 942 DAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ G + + L + + +SDV+++GV + EL+T
Sbjct: 211 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 89 VFSNLSMLVKLSMSNNSIS-GVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNL 147
+F+ LS L L M+ NS +PD + ++L FLD+S P+ L SLQ L
Sbjct: 145 IFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 204
Query: 148 SLAGNNFSGLIPDSVSGLVSIQSLDLSHN 176
+++ NNF L L S+Q LD S N
Sbjct: 205 NMSHNNFFSLDTFPYKCLNSLQVLDYSLN 233
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 29/171 (16%)
Query: 455 LRVLDLSFNHLDGPFLTNLLNSSTLQELHLADNLLTGVLDFSP-PSVSNLQVLDLSHNRL 513
L+ LDLSFN + +N L L+ L + L + +FS S+ NL LD+SH
Sbjct: 80 LKYLDLSFNGV-ITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHT 138
Query: 514 NGYFPDRLGSLTGLKVLCLAGNNISGSL-------------------------PTSMANM 548
F L+ L+VL +AGN+ + PT+ ++
Sbjct: 139 RVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSL 198
Query: 549 TSLSSLVISQNHFTG--PLPNNLPNSLETFNVSYNDFSGAVPENLRKFPSS 597
+SL L +S N+F P NSL+ + S N + + L+ FPSS
Sbjct: 199 SSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSS 249
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 21/166 (12%)
Query: 34 GIKNDPTGFVLNSWNEESIDFDGCPS--------------SWNGIVCNGGNVAGV-VLDN 78
G+ + T S + + F GC S S+NG++ N G+ L++
Sbjct: 46 GVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEH 105
Query: 79 L-----GLSAAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSS 133
L L ++ SVF +L L+ L +S+ SLE L ++ N F +
Sbjct: 106 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165
Query: 134 -LPSGIGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSF 178
LP +L +L L L+ L P + + L S+Q L++SHN+F
Sbjct: 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 211
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 94/238 (39%), Gaps = 36/238 (15%)
Query: 361 TNLHMLNLSSNGLT-----GELPLLTGSCAVLDLSNNQFEGNLSRILKWGNIEYLDLSRN 415
T L L+LSSNGL+ + T S LDLS N S L +E+LD +
Sbjct: 52 TQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHS 111
Query: 416 HLTGSIPEETPQFLRXXXXXXXXXXXXXXXPKVIIQYQKLRVLDLSFNHLDGPFLTNLLN 475
+L ++ +F V + + L LD+S H F
Sbjct: 112 NL-----KQMSEF------------------SVFLSLRNLIYLDISHTHTRVAFNGIFNG 148
Query: 476 SSTLQELHLADNLLTGVLDFSP---PSVSNLQVLDLSHNRLNGYFPDRLGSLTGLKVLCL 532
S+L+ L +A N +F P + NL LDLS +L P SL+ L+VL +
Sbjct: 149 LSSLEVLKMAGNSFQE--NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 206
Query: 533 AGNNISGSLPTSMANMTSLSSLVISQNHFTGPLPNNL---PNSLETFNVSYNDFSGAV 587
+ NN + SL L S NH L P+SL N++ NDF+
Sbjct: 207 SHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 264
Score = 33.9 bits (76), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 85/198 (42%), Gaps = 33/198 (16%)
Query: 133 SLPSGI-GKLESLQNLSLAGN--NFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTRX 189
SLP G+ KL L LSL+ N +F G S G S++ LDLS F+G +
Sbjct: 42 SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS---FNGVIT------ 92
Query: 190 XXXXXXXXXXXGFSKRIPRGFELILGLQVLDFHGNKLDGHLDGEFFL-LTNASHIDFSGN 248
+ F + L+ LDF + L + FL L N ++D S +
Sbjct: 93 ----------------MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDIS-H 135
Query: 249 MFVGSSSQKFLPGLSQSVQYLNLSLNQLTGSLVNGGELQLFENLKVLDLSYNQLTGELP- 307
+ GLS S++ L ++ N + + +L NL LDLS QL P
Sbjct: 136 THTRVAFNGIFNGLS-SLEVLKMAGNSFQENFLPDIFTEL-RNLTFLDLSQCQLEQLSPT 193
Query: 308 GFNFVYELQVLKLSNNRF 325
FN + LQVL +S+N F
Sbjct: 194 AFNSLSSLQVLNMSHNNF 211
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 782 EVLGRSSHGTSYRAT-LENG----MFLTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVV 835
+VLG + GT Y+ + G + + +K LRE + K ++ +P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLN 893
L G T +++ + G L ++ + G L W V +A+G+N
Sbjct: 81 RLLGICLTSTVQ---LITQLMPFGXLLDYVREHKDNIGSQYLLNWC------VQIAKGMN 131
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
YL DR + H +L A N+L+ P + ++ D+ L +L+ A E + G + + L
Sbjct: 132 YLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLG-AEEKEYHAEGGKVPIKWMAL 188
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
+ + +SDV+++GV + EL+T
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 883 KIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILD 942
KIAV + + L +LH +V H ++K +N+L++ ++ D+ + + + + +D
Sbjct: 113 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALG-QVKMCDFGISGYLVD--DVAKDID 169
Query: 943 AGVLGYRAPELAASK--KPHPSFKSDVYAFGVILLEL 977
AG Y APE + + S KSD+++ G+ ++EL
Sbjct: 170 AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 108/266 (40%), Gaps = 39/266 (14%)
Query: 85 ADLSVFSNLSMLVKLSMSNNSISGVIP--------------------DNIGDFKSLEFLD 124
D++ NL+ LV + M+NN I+ + P D + + +L L+
Sbjct: 76 TDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLE 135
Query: 125 VSDNLFSSSLPSGIGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPP 184
+S N S S + L SLQ LS + N + L P ++ L +++ LD+S N S
Sbjct: 136 LSSNTISD--ISALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSD--IS 189
Query: 185 ALTRXXXXXXXXXXXXGFSKRIPRGFELILGLQVLDFHGNKLDGHLDGEFFLLTNASHID 244
L + S P G ++ L L +GN+L G LTN + +D
Sbjct: 190 VLAKLTNLESLIATNNQISDITPLG--ILTNLDELSLNGNQLKDI--GTLASLTNLTDLD 245
Query: 245 FSGNMFVGSSSQKFLPGLSQSVQYLNLSLNQLTGSLVNGGELQLFENLKVLDLSYNQLTG 304
+ N S+ L GL++ + L L NQ++ N L L L+L+ NQL
Sbjct: 246 LANNQI---SNLAPLSGLTKLTE-LKLGANQIS----NISPLAGLTALTNLELNENQLED 297
Query: 305 ELPGFNFVYELQVLKLSNNRFSGFIP 330
P N L L L N S P
Sbjct: 298 ISPISNL-KNLTYLTLYFNNISDISP 322
Score = 30.0 bits (66), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 14/206 (6%)
Query: 362 NLHMLNLSSNGLTGELPLLTGSCAVLDLSNNQFEGNLSRILKWGNIEYLDLSRNHLTGSI 421
NL +N S+N LT PL + V L NN +++ + N+ L L N +T
Sbjct: 64 NLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDID 123
Query: 422 PEETPQFLRXXXXXXXXXXXXXXXPKVIIQYQKLRVLDLSFNHLDGPFLTNLLNSSTLQE 481
P + L + Q LSF+ L L N +TL+
Sbjct: 124 PLKNLTNLNRLELSSNTISDISALSGLTSLQQ------LSFSSNQVTDLKPLANLTTLER 177
Query: 482 LHLADNLLTGVLDFSP-PSVSNLQVLDLSHNRLNGYFPDRLGSLTGLKVLCLAGNNISGS 540
L ++ N V D S ++NL+ L ++N+++ P LG LT L L L GN +
Sbjct: 178 LDISSN---KVSDISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD- 231
Query: 541 LPTSMANMTSLSSLVISQNHFTGPLP 566
++A++T+L+ L ++ N + P
Sbjct: 232 -IGTLASLTNLTDLDLANNQISNLAP 256
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 782 EVLGRSSHGTSYRAT-LENG----MFLTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVV 835
+VLG + GT Y+ + G + + +K LRE + K ++ +P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLN 893
L G T +++ + G L ++ + G L W V +A+G+N
Sbjct: 83 RLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMN 133
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
YL DR + H +L A N+L+ P + ++ D+ L +L+ A E + G + + L
Sbjct: 134 YLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLG-AEEKEYHAEGGKVPIKWMAL 190
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
+ + +SDV+++GV + EL+T
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 782 EVLGRSSHGTSYRAT-LENG----MFLTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVV 835
+VLG + GT Y+ + G + + +K LRE + K ++ +P+V
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLN 893
L G T +++ + G L ++ + G L W V +A+G+N
Sbjct: 106 RLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMN 156
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
YL DR + H +L A N+L+ P + ++ D+ L +L+ A E + G + + L
Sbjct: 157 YLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLG-AEEKEYHAEGGKVPIKWMAL 213
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
+ + +SDV+++GV + EL+T
Sbjct: 214 ESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 782 EVLGRSSHGTSYRAT-LENG----MFLTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVV 835
+VLG + GT Y+ + G + + +K LRE + K ++ +P+V
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLN 893
L G T +++ + G L ++ + G L W V +A+G+N
Sbjct: 87 RLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMN 137
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
YL DR + H +L A N+L+ P + ++ D+ L +L+ A E + G + + L
Sbjct: 138 YLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLG-AEEKEYHAEGGKVPIKWMAL 194
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
+ + +SDV+++GV + EL+T
Sbjct: 195 ESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 782 EVLGRSSHGTSYRAT-LENG----MFLTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVV 835
+VLG + GT Y+ + G + + +K LRE + K ++ +P+V
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLN 893
L G T +++ + G L ++ + G L W V +A+G+N
Sbjct: 91 RLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMN 141
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
YL DR + H +L A N+L+ P + ++ D+ L +L+ A E + G + + L
Sbjct: 142 YLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLG-AEEKEYHAEGGKVPIKWMAL 198
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
+ + +SDV+++GV + EL+T
Sbjct: 199 ESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 782 EVLGRSSHGTSYRAT-LENG----MFLTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVV 835
+VLG + GT Y+ + G + + +K LRE + K ++ +P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLN 893
L G T +++ + G L ++ + G L W V +A+G+N
Sbjct: 84 RLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMN 134
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
YL DR + H +L A N+L+ P + ++ D+ L +L+ A E + G + + L
Sbjct: 135 YLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLG-AEEKEYHAEGGKVPIKWMAL 191
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
+ + +SDV+++GV + EL+T
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 782 EVLGRSSHGTSYRAT-LENG----MFLTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVV 835
+VLG + GT Y+ + G + + +K LRE + K ++ +P+V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLN 893
L G T +++ + G L ++ + G L W V +A+G+N
Sbjct: 88 RLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMN 138
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
YL DR + H +L A N+L+ P + ++ D+ L +L+ A E + G + + L
Sbjct: 139 YLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLG-AEEKEYHAEGGKVPIKWMAL 195
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
+ + +SDV+++GV + EL+T
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 782 EVLGRSSHGTSYRAT-LENG----MFLTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVV 835
+VLG + GT Y+ + G + + +K LRE + K ++ +P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLN 893
L G T +++ + G L ++ + G L W V +A+G+N
Sbjct: 81 RLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMN 131
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
YL DR + H +L A N+L+ P + ++ D+ L +L+ A E + G + + L
Sbjct: 132 YLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLG-AEEKEYHAEGGKVPIKWMAL 188
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
+ + +SDV+++GV + EL+T
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 782 EVLGRSSHGTSYRAT-LENG----MFLTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVV 835
+VLG + GT Y+ + G + + +K LRE + K ++ +P+V
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLN 893
L G T +++ + G L ++ + G L W V +A+G+N
Sbjct: 75 RLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMN 125
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
YL DR + H +L A N+L+ P + ++ D+ L +L+ A E + G + + L
Sbjct: 126 YLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLG-AEEKEYHAEGGKVPIKWMAL 182
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
+ + +SDV+++GV + EL+T
Sbjct: 183 ESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 782 EVLGRSSHGTSYRAT-LENG----MFLTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVV 835
+VLG + GT Y+ + G + + +K LRE + K ++ +P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLN 893
L G T +++ + G L ++ + G L W V +A+G+N
Sbjct: 81 RLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMN 131
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
YL DR + H +L A N+L+ P + ++ D+ L +L+ A E + G + + L
Sbjct: 132 YLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLG-AEEKEYHAEGGKVPIKWMAL 188
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
+ + +SDV+++GV + EL+T
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 782 EVLGRSSHGTSYRAT-LENG----MFLTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVV 835
+VLG + GT Y+ + G + + +K LRE + K ++ +P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLN 893
L G T +++ + G L ++ + G L W V +A+G+N
Sbjct: 84 RLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMN 134
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
YL DR + H +L A N+L+ P + ++ D+ L +L+ A E + G + + L
Sbjct: 135 YLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLG-AEEKEYHAEGGKVPIKWMAL 191
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
+ + +SDV+++GV + EL+T
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 782 EVLGRSSHGTSYRAT-LENG----MFLTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVV 835
+VLG + GT Y+ + G + + +K LRE + K ++ +P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLN 893
L G T +++ + G L ++ + G L W V +A+G+N
Sbjct: 84 RLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMN 134
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
YL DR + H +L A N+L+ P + ++ D+ L +L+ A E + G + + L
Sbjct: 135 YLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLG-AEEKEYHAEGGKVPIKWMAL 191
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
+ + +SDV+++GV + EL+T
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 72/137 (52%), Gaps = 16/137 (11%)
Query: 850 LILSDYISPGSLASFLY-------DRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVP 902
L++ + ++ G L S+L + PGR PP T + +++A ++A G+ YL+ + V
Sbjct: 95 LVVMELMAHGDLKSYLRSLRPEAENNPGR--PPPTLQEMIQMAAEIADGMAYLNAKKFV- 151
Query: 903 HGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPH 960
H +L A N ++ D ++ D+ + R + + + G+L R APE + K
Sbjct: 152 HRDLAARNCMV-AHDFTVKIGDFGMTRDIYETDYYRKG-GKGLLPVRWMAPE--SLKDGV 207
Query: 961 PSFKSDVYAFGVILLEL 977
+ SD+++FGV+L E+
Sbjct: 208 FTTSSDMWSFGVVLWEI 224
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 875 PLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQA 934
P+T + +++ D + LN+ H + H ++K NI++ + +V D+ + R + +
Sbjct: 112 PMTPKRAIEVIADACQALNFSH-QNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADS 169
Query: 935 G-TIEQILDAGVLG---YRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
G ++ Q A V+G Y +PE A + +SDVY+ G +L E+LTG
Sbjct: 170 GNSVTQT--AAVIGTAQYLSPEQA--RGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 875 PLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQA 934
P+T + +++ D + LN+ H + H ++K NI++ + +V D+ + R + +
Sbjct: 112 PMTPKRAIEVIADACQALNFSH-QNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADS 169
Query: 935 G-TIEQILDAGVLG---YRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
G ++ Q A V+G Y +PE A + +SDVY+ G +L E+LTG
Sbjct: 170 GNSVTQT--AAVIGTAQYLSPEQA--RGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 875 PLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQA 934
P+T + +++ D + LN+ H + H ++K NI++ + +V D+ + R + +
Sbjct: 112 PMTPKRAIEVIADACQALNFSH-QNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADS 169
Query: 935 G-TIEQILDAGVLG---YRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
G ++ Q A V+G Y +PE A + +SDVY+ G +L E+LTG
Sbjct: 170 GNSVTQT--AAVIGTAQYLSPEQA--RGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
+RHP+++ L Y ++ E +++ +Y + L ++ R ++ + + +
Sbjct: 61 LRHPHIIKL--YDVIKSKDEIIMVIEY-AGNELFDYIVQRD-----KMSEQEARRFFQQI 112
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ Y H + V H +LK N+LLD LN ++AD+ L +MT ++ G Y
Sbjct: 113 ISAVEYCHRHKIV-HRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKT--SCGSPNY 168
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGD 985
APE+ S K + + DV++ GVIL +L R D
Sbjct: 169 AAPEV-ISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 875 PLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQA 934
P+T + +++ D + LN+ H + H ++K NI++ + +V D+ + R + +
Sbjct: 112 PMTPKRAIEVIADACQALNFSH-QNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADS 169
Query: 935 G-TIEQILDAGVLG---YRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
G ++ Q A V+G Y +PE A + +SDVY+ G +L E+LTG
Sbjct: 170 GNSVTQT--AAVIGTAQYLSPEQA--RGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 72/137 (52%), Gaps = 16/137 (11%)
Query: 850 LILSDYISPGSLASFLY-------DRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVP 902
L++ + ++ G L S+L + PGR PP T + +++A ++A G+ YL+ + V
Sbjct: 96 LVVMELMAHGDLKSYLRSLRPEAENNPGR--PPPTLQEMIQMAAEIADGMAYLNAKKFV- 152
Query: 903 HGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPH 960
H +L A N ++ D ++ D+ + R + + + G+L R APE + K
Sbjct: 153 HRDLAARNCMV-AHDFTVKIGDFGMTRDIYETDYYRK-GGKGLLPVRWMAPE--SLKDGV 208
Query: 961 PSFKSDVYAFGVILLEL 977
+ SD+++FGV+L E+
Sbjct: 209 FTTSSDMWSFGVVLWEI 225
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 18/156 (11%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQR--LKIAV 886
+ HPN++ L+ + PT E ++ + ++ G L+DR KG +++R
Sbjct: 105 LSHPNIIKLKEIFETPT--EISLVLELVTGGE----LFDRIVEKG---YYSERDAADAVK 155
Query: 887 DVARGLNYLHFDRAVPHGNLKATNILL--DGPDLNARVADYCLHRLMTQAGTIEQILDAG 944
+ + YLH + + H +LK N+L PD ++AD+ L +++ ++ + G
Sbjct: 156 QILEAVAYLH-ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTV--CG 212
Query: 945 VLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
GY APE+ P + D+++ G+I LL G
Sbjct: 213 TPGYCAPEILRGCAYGP--EVDMWSVGIITYILLCG 246
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 832 PNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARG 891
P +VG G ++ + E I +++ GSL L + GR + K+++ V +G
Sbjct: 91 PYIVGFYGAFY--SDGEISICMEHMDGGSLDQVL-KKAGRIPEQILG----KVSIAVIKG 143
Query: 892 LNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDA------GV 945
L YL + H ++K +NIL++ ++ D+ G Q++D+ G
Sbjct: 144 LTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDF---------GVSGQLIDSMANSFVGT 193
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y +PE H S +SD+++ G+ L+E+ GR
Sbjct: 194 RSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGR 227
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 832 PNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARG 891
P +VG G ++ + E I +++ GSL L + GR + K+++ V +G
Sbjct: 64 PYIVGFYGAFY--SDGEISICMEHMDGGSLDQVL-KKAGRIPEQILG----KVSIAVIKG 116
Query: 892 LNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDA------GV 945
L YL + H ++K +NIL++ ++ D+ G Q++D+ G
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDF---------GVSGQLIDSMANSFVGT 166
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y +PE H S +SD+++ G+ L+E+ GR
Sbjct: 167 RSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 832 PNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARG 891
P +VG G ++ + E I +++ GSL L + GR + K+++ V +G
Sbjct: 64 PYIVGFYGAFY--SDGEISICMEHMDGGSLDQVL-KKAGRIPEQILG----KVSIAVIKG 116
Query: 892 LNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDA------GV 945
L YL + H ++K +NIL++ ++ D+ G Q++D+ G
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDF---------GVSGQLIDSMANSFVGT 166
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y +PE H S +SD+++ G+ L+E+ GR
Sbjct: 167 RSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 43.9 bits (102), Expect = 5e-04, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
N+ H +V L G Q I+++Y++ G L ++L + R Q L++ D
Sbjct: 75 NLSHEKLVQLYGVC--TKQRPIFIITEYMANGCLLNYLREMRHR----FQTQQLLEMCKD 128
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
V + YL + H +L A N L++ + +V+D+ L R + + +
Sbjct: 129 VCEAMEYLE-SKQFLHRDLAARNCLVNDQGV-VKVSDFGLSRYVLDDEETSSVGSKFPVR 186
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ PE+ K S KSD++AFGV++ E+ +
Sbjct: 187 WSPPEVLMYSKF--SSKSDIWAFGVLMWEIYS 216
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 89 VFSNLSMLVKLSMSNNSIS-GVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNL 147
+F+ LS L L M+ NS +PD + ++L FLD+S P+ L SLQ L
Sbjct: 440 IFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 499
Query: 148 SLAGNNFSGLIPDSV-SGLVSIQSLDLSHNSFSGSLP 183
++A N +PD + L S+Q + L N + S P
Sbjct: 500 NMASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 535
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 6/139 (4%)
Query: 455 LRVLDLSFNHLDGPFLTNLLNSSTLQELHLADNLLTGVLDFSP-PSVSNLQVLDLSHNRL 513
L+ LDLSFN + +N L L+ L + L + +FS S+ NL LD+SH
Sbjct: 375 LKYLDLSFNGV-ITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHT 433
Query: 514 NGYFPDRLGSLTGLKVLCLAGNNISGS-LPTSMANMTSLSSLVISQNHFT--GPLPNNLP 570
F L+ L+VL +AGN+ + LP + +L+ L +SQ P N
Sbjct: 434 RVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSL 493
Query: 571 NSLETFNVSYNDFSGAVPE 589
+SL+ N++ N +VP+
Sbjct: 494 SSLQVLNMASNQLK-SVPD 511
Score = 36.2 bits (82), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 7/124 (5%)
Query: 60 SWNGIVCNGGNVAGV-VLDNL-----GLSAAADLSVFSNLSMLVKLSMSNNSISGVIPDN 113
S+NG++ N G+ L++L L ++ SVF +L L+ L +S+
Sbjct: 381 SFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGI 440
Query: 114 IGDFKSLEFLDVSDNLFSSS-LPSGIGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLD 172
SLE L ++ N F + LP +L +L L L+ L P + + L S+Q L+
Sbjct: 441 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 500
Query: 173 LSHN 176
++ N
Sbjct: 501 MASN 504
Score = 35.0 bits (79), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 82/212 (38%), Gaps = 33/212 (15%)
Query: 363 LHMLNLSSNGLT-----GELPLLTGSCAVLDLSNNQFEGNLSRILKWGNIEYLDLSRNHL 417
L L+LS NGL+ + T S LDLS N S L +E+LD ++L
Sbjct: 349 LEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNL 408
Query: 418 TGSIPEETPQFLRXXXXXXXXXXXXXXXPKVIIQYQKLRVLDLSFNHLDGPFLTNLLNSS 477
++ +F V + + L LD+S H F S
Sbjct: 409 -----KQMSEF------------------SVFLSLRNLIYLDISHTHTRVAFNGIFNGLS 445
Query: 478 TLQELHLADNLLTGVLDFSP---PSVSNLQVLDLSHNRLNGYFPDRLGSLTGLKVLCLAG 534
+L+ L +A N +F P + NL LDLS +L P SL+ L+VL +A
Sbjct: 446 SLEVLKMAGNSFQE--NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMAS 503
Query: 535 NNISGSLPTSMANMTSLSSLVISQNHFTGPLP 566
N + +TSL + + N + P
Sbjct: 504 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535
Score = 30.8 bits (68), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 76/197 (38%), Gaps = 37/197 (18%)
Query: 52 IDFDGCPSSWNGIVCNGGNVAGVVLDNLGLSAAADLSVFSN---LSMLVKLSMSNNSISG 108
+ F GC C+ + L L LS +++ SN L L L ++++
Sbjct: 359 LSFKGC--------CSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQ 410
Query: 109 VIPDNIG-DFKSLEFLDVSDNLFSSSLPSGIGKLESLQNLSLAGNNFS-GLIPDSVSGLV 166
+ ++ ++L +LD+S + L SL+ L +AGN+F +PD + L
Sbjct: 411 MSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELR 470
Query: 167 SIQSLDLSHNSFSGSLPPALTRXXXXXXXXXXXXGFSKRIPRGFELILGLQVLDFHGNKL 226
++ LDLS + P F + LQVL+ N+L
Sbjct: 471 NLTFLDLSQ------------------------CQLEQLSPTAFNSLSSLQVLNMASNQL 506
Query: 227 DGHLDGEFFLLTNASHI 243
DG F LT+ I
Sbjct: 507 KSVPDGIFDRLTSLQKI 523
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 832 PNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARG 891
P +VG G ++ + E I +++ GSL L + GR + K+++ V +G
Sbjct: 64 PYIVGFYGAFY--SDGEISICMEHMDGGSLDQVL-KKAGRIPEQILG----KVSIAVIKG 116
Query: 892 LNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDA------GV 945
L YL + H ++K +NIL++ ++ D+ G Q++D+ G
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDF---------GVSGQLIDSMANSFVGT 166
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y +PE H S +SD+++ G+ L+E+ GR
Sbjct: 167 RSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 832 PNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARG 891
P +VG G ++ + E I +++ GSL L + GR + K+++ V +G
Sbjct: 64 PYIVGFYGAFY--SDGEISICMEHMDGGSLDQVL-KKAGRIPEQILG----KVSIAVIKG 116
Query: 892 LNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDA------GV 945
L YL + H ++K +NIL++ ++ D+ G Q++D+ G
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDF---------GVSGQLIDSMANSFVGT 166
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y +PE H S +SD+++ G+ L+E+ GR
Sbjct: 167 RSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 832 PNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARG 891
P +VG G ++ + E I +++ GSL L + GR + K+++ V +G
Sbjct: 126 PYIVGFYGAFY--SDGEISICMEHMDGGSLDQVL-KKAGRIPEQILG----KVSIAVIKG 178
Query: 892 LNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDA------GV 945
L YL + H ++K +NIL++ ++ D+ G Q++D+ G
Sbjct: 179 LTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDF---------GVSGQLIDSMANSFVGT 228
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y +PE H S +SD+++ G+ L+E+ GR
Sbjct: 229 RSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGR 262
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 18/214 (8%)
Query: 774 EELSRAPAEVLGRSSHGTSYRATL-ENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHP 832
E++ +V+G S G ++A L E+ K L++ K R ++HP
Sbjct: 38 REIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRI-----VKHP 92
Query: 833 NVVGLRGYYW--GPTQHE---KLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
NVV L+ +++ G + E L+L AS Y + + P L +
Sbjct: 93 NVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYM---YQ 149
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ R L Y+H + H ++K N+LLD P ++ D+ +++ AG +
Sbjct: 150 LLRSLAYIH-SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI-AGE-PNVSXICSRY 206
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPEL + + D+++ G ++ EL+ G+
Sbjct: 207 YRAPELIFGATNYTT-NIDIWSTGCVMAELMQGQ 239
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 29/163 (17%)
Query: 848 EKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYL--------HFDR 899
E L++ +Y GSL +L W ++A V RGL YL H+
Sbjct: 86 EYLLVMEYYPNGSLXKYLSLHTS------DWVSSCRLAHSVTRGLAYLHTELPRGDHYKP 139
Query: 900 AVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIE-------QILDAGVLGYRAPE 952
A+ H +L + N+L+ D ++D+ L +T + I + G + Y APE
Sbjct: 140 AISHRDLNSRNVLVKN-DGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPE 198
Query: 953 LAAS----KKPHPSFKS-DVYAFGVILLELLTGRCAGDVISGE 990
+ + + K D+YA G+I E+ RC D+ GE
Sbjct: 199 VLEGAVNLRDXESALKQVDMYALGLIYWEIFM-RCT-DLFPGE 239
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
N+ H +V L G Q I+++Y++ G L ++L + R Q L++ D
Sbjct: 66 NLSHEKLVQLYGVC--TKQRPIFIITEYMANGCLLNYLREMRHR----FQTQQLLEMCKD 119
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
V + YL + H +L A N L++ + +V+D+ L R + + +
Sbjct: 120 VCEAMEYLE-SKQFLHRDLAARNCLVNDQGV-VKVSDFGLSRYVLDDEYTSSVGSKFPVR 177
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ PE+ K S KSD++AFGV++ E+ +
Sbjct: 178 WSPPEVLMYSKF--SSKSDIWAFGVLMWEIYS 207
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
N+ H +V L G Q I+++Y++ G L ++L + R Q L++ D
Sbjct: 59 NLSHEKLVQLYGVC--TKQRPIFIITEYMANGCLLNYLREMRHR----FQTQQLLEMCKD 112
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
V + YL + H +L A N L++ + +V+D+ L R + + +
Sbjct: 113 VCEAMEYLE-SKQFLHRDLAARNCLVNDQGV-VKVSDFGLSRYVLDDEYTSSVGSKFPVR 170
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ PE+ K S KSD++AFGV++ E+ +
Sbjct: 171 WSPPEVLMYSKF--SSKSDIWAFGVLMWEIYS 200
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
N+ H +V L G Q I+++Y++ G L ++L + R Q L++ D
Sbjct: 60 NLSHEKLVQLYGVC--TKQRPIFIITEYMANGCLLNYLREMRHR----FQTQQLLEMCKD 113
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
V + YL + H +L A N L++ + +V+D+ L R + + +
Sbjct: 114 VCEAMEYLE-SKQFLHRDLAARNCLVNDQGV-VKVSDFGLSRYVLDDEYTSSVGSKFPVR 171
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ PE+ K S KSD++AFGV++ E+ +
Sbjct: 172 WSPPEVLMYSKF--SSKSDIWAFGVLMWEIYS 201
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
N+ H +V L G Q I+++Y++ G L ++L + R Q L++ D
Sbjct: 75 NLSHEKLVQLYGVC--TKQRPIFIITEYMANGCLLNYLREMRHR----FQTQQLLEMCKD 128
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
V + YL + H +L A N L++ + +V+D+ L R + + +
Sbjct: 129 VCEAMEYLE-SKQFLHRDLAARNCLVNDQGV-VKVSDFGLSRYVLDDEYTSSVGSKFPVR 186
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ PE+ K S KSD++AFGV++ E+ +
Sbjct: 187 WSPPEVLMYSKF--SSKSDIWAFGVLMWEIYS 216
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
N+ H +V L G Q I+++Y++ G L ++L + R Q L++ D
Sbjct: 55 NLSHEKLVQLYGVC--TKQRPIFIITEYMANGCLLNYLREMRHR----FQTQQLLEMCKD 108
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
V + YL + H +L A N L++ + +V+D+ L R + + +
Sbjct: 109 VCEAMEYLE-SKQFLHRDLAARNCLVNDQGV-VKVSDFGLSRYVLDDEYTSSVGSKFPVR 166
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ PE+ K S KSD++AFGV++ E+ +
Sbjct: 167 WSPPEVLMYSKF--SSKSDIWAFGVLMWEIYS 196
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 25/156 (16%)
Query: 832 PNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARG 891
P +VG G ++ + E I +++ GSL L + GR + K+++ V +G
Sbjct: 67 PYIVGFYGAFY--SDGEISICMEHMDGGSLDQVL-KKAGRIPEQILG----KVSIAVIKG 119
Query: 892 LNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILD------AGV 945
L YL + H ++K +NIL++ ++ D+ G Q++D G
Sbjct: 120 LTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDF---------GVSGQLIDEMANEFVGT 169
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y +PE H S +SD+++ G+ L+E+ GR
Sbjct: 170 RSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 18/156 (11%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++ H ++V L G G + +++ Y+ GSL + G GP L L V
Sbjct: 71 SLDHAHIVRLLGLCPGSSLQ---LVTQYLPLGSLLDHVRQHRGALGPQLL----LNWGVQ 123
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV-- 945
+A+G+ YL + + H NL A N+LL P +VAD+ + L+ +Q+L +
Sbjct: 124 IAKGMYYLE-EHGMVHRNLAARNVLLKSPS-QVQVADFGVADLLPPDD--KQLLYSEAKT 179
Query: 946 -LGYRAPE-LAASKKPHPSFKSDVYAFGVILLELLT 979
+ + A E + K H +SDV+++GV + EL+T
Sbjct: 180 PIKWMALESIHFGKYTH---QSDVWSYGVTVWELMT 212
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 782 EVLGRSSHGTSYRAT-LENG----MFLTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVV 835
+VLG + GT Y+ + G + + +K LRE + K ++ +P+V
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLN 893
L G T + L + G L ++ + G L W V +A+G+N
Sbjct: 82 RLLGICLTSTVQLIMQLMPF---GXLLDYVREHKDNIGSQYLLNWC------VQIAKGMN 132
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
YL DR + H +L A N+L+ P + ++ D+ L +L+ A E + G + + L
Sbjct: 133 YLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLG-AEEKEYHAEGGKVPIKWMAL 189
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
+ + +SDV+++GV + EL+T
Sbjct: 190 ESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 849 KLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLNYLHFDRAVPHGNL 906
+ IL + ++ G L SFL + R P L L +A D+A G YL + + H ++
Sbjct: 123 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDI 181
Query: 907 KATNILLD--GPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFK 964
A N LL GP A++ D+ + R + +A + A + P A + S K
Sbjct: 182 AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS-K 240
Query: 965 SDVYAFGVILLELLT 979
+D ++FGV+L E+ +
Sbjct: 241 TDTWSFGVLLWEIFS 255
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 43.5 bits (101), Expect = 7e-04, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 782 EVLGRSSHGTSYRAT-LENG----MFLTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVV 835
+VLG + GT Y+ + G + + +K LRE + K ++ +P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLN 893
L G T + L + G L ++ + G L W V +A+G+N
Sbjct: 83 RLLGICLTSTVQLIMQLMPF---GCLLDYVREHKDNIGSQYLLNWC------VQIAKGMN 133
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
YL DR + H +L A N+L+ P + ++ D+ L +L+ A E + G + + L
Sbjct: 134 YLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLG-AEEKEYHAEGGKVPIKWMAL 190
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
+ + +SDV+++GV + EL+T
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 43.5 bits (101), Expect = 7e-04, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 782 EVLGRSSHGTSYRAT-LENG----MFLTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVV 835
+VLG + GT Y+ + G + + +K LRE + K ++ +P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLN 893
L G T + L + G L ++ + G L W V +A+G+N
Sbjct: 84 RLLGICLTSTVQLIMQLMPF---GCLLDYVREHKDNIGSQYLLNWC------VQIAKGMN 134
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
YL DR + H +L A N+L+ P + ++ D+ L +L+ A E + G + + L
Sbjct: 135 YLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLG-AEEKEYHAEGGKVPIKWMAL 191
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
+ + +SDV+++GV + EL+T
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 43.5 bits (101), Expect = 7e-04, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 782 EVLGRSSHGTSYRAT-LENG----MFLTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVV 835
+VLG + GT Y+ + G + + +K LRE + K ++ +P+V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLN 893
L G T + L + G L ++ + G L W V +A+G+N
Sbjct: 85 RLLGICLTSTVQLIMQLMPF---GCLLDYVREHKDNIGSQYLLNWC------VQIAKGMN 135
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
YL DR + H +L A N+L+ P + ++ D+ L +L+ A E + G + + L
Sbjct: 136 YLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLG-AEEKEYHAEGGKVPIKWMAL 192
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
+ + +SDV+++GV + EL+T
Sbjct: 193 ESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 43.5 bits (101), Expect = 7e-04, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 782 EVLGRSSHGTSYRAT-LENG----MFLTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVV 835
+VLG + GT Y+ + G + + +K LRE + K ++ +P+V
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLN 893
L G T + L + G L ++ + G L W V +A+G+N
Sbjct: 82 RLLGICLTSTVQLIMQLMPF---GCLLDYVREHKDNIGSQYLLNWC------VQIAKGMN 132
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
YL DR + H +L A N+L+ P + ++ D+ L +L+ A E + G + + L
Sbjct: 133 YLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLG-AEEKEYHAEGGKVPIKWMAL 189
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
+ + +SDV+++GV + EL+T
Sbjct: 190 ESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 43.5 bits (101), Expect = 7e-04, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 782 EVLGRSSHGTSYRAT-LENG----MFLTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVV 835
+VLG + GT Y+ + G + + +K LRE + K ++ +P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLN 893
L G T + L + G L ++ + G L W V +A+G+N
Sbjct: 81 RLLGICLTSTVQLIMQLMPF---GCLLDYVREHKDNIGSQYLLNWC------VQIAKGMN 131
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
YL DR + H +L A N+L+ P + ++ D+ L +L+ A E + G + + L
Sbjct: 132 YLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLG-AEEKEYHAEGGKVPIKWMAL 188
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
+ + +SDV+++GV + EL+T
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 43.5 bits (101), Expect = 7e-04, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 782 EVLGRSSHGTSYRAT-LENG----MFLTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVV 835
+VLG + GT Y+ + G + + +K LRE + K ++ +P+V
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLN 893
L G T +++ + G L ++ + G L W V +A G+N
Sbjct: 78 RLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAEGMN 128
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
YL DR + H +L A N+L+ P + ++ D+ L +L+ A E + G + + L
Sbjct: 129 YLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLG-AEEKEYHAEGGKVPIKWMAL 185
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
+ + +SDV+++GV + EL+T
Sbjct: 186 ESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 832 PNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARG 891
P +VG G ++ + E I +++ GSL L + GR + K+++ V +G
Sbjct: 64 PYIVGFYGAFY--SDGEISICMEHMDGGSLDQVL-KKAGRIPEQILG----KVSIAVIKG 116
Query: 892 LNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDA------GV 945
L YL + H ++K +NIL++ ++ D+ G Q++D+ G
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDF---------GVSGQLIDSMANSFVGT 166
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y +PE H S +SD+++ G+ L+E+ GR
Sbjct: 167 RSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 43.5 bits (101), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 9/99 (9%)
Query: 885 AVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY--CLHRLMTQAGTIEQILD 942
A ++ GL +LH + + + +LK NILLD D + ++AD+ C ++ A T
Sbjct: 124 AAEIILGLQFLH-SKGIVYRDLKLDNILLD-KDGHIKIADFGMCKENMLGDAKTNXF--- 178
Query: 943 AGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
G Y APE+ +K + S D ++FGV+L E+L G+
Sbjct: 179 CGTPDYIAPEILLGQKYNHSV--DWWSFGVLLYEMLIGQ 215
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 849 KLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLNYLHFDRAVPHGNL 906
+ IL + ++ G L SFL + R P L L +A D+A G YL + + H ++
Sbjct: 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDI 166
Query: 907 KATNILLD--GPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFK 964
A N LL GP A++ D+ + R + +A + A + P A + S K
Sbjct: 167 AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS-K 225
Query: 965 SDVYAFGVILLELLT 979
+D ++FGV+L E+ +
Sbjct: 226 TDTWSFGVLLWEIFS 240
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 18/156 (11%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ LIL +Y G++ R +K + +
Sbjct: 63 HLRHPNILRLYGYFHDATR-VYLIL-EYAPLGTVY-----RELQKLSKFDEQRTATYITE 115
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY--CLHRLMTQAGTIEQILDAGV 945
+A L+Y H R + H ++K N+LL G ++AD+ +H ++ T+ G
Sbjct: 116 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTL-----CGT 168
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
L Y PE+ + H K D+++ GV+ E L G+
Sbjct: 169 LDYLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVGK 202
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 18/156 (11%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ LIL +Y G++ R +K + +
Sbjct: 61 HLRHPNILRLYGYFHDATR-VYLIL-EYAPLGTVY-----RELQKLSKFDEQRTATYITE 113
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY--CLHRLMTQAGTIEQILDAGV 945
+A L+Y H R + H ++K N+LL G ++AD+ +H ++ T+ G
Sbjct: 114 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTL-----CGT 166
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
L Y PE+ + H K D+++ GV+ E L G+
Sbjct: 167 LDYLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVGK 200
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 18/156 (11%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ LIL +Y G++ R +K + +
Sbjct: 67 HLRHPNILRLYGYFHDATR-VYLIL-EYAPLGTVY-----RELQKLSKFDEQRTATYITE 119
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY--CLHRLMTQAGTIEQILDAGV 945
+A L+Y H R + H ++K N+LL G ++AD+ +H ++ T+ G
Sbjct: 120 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTL-----CGT 172
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
L Y PE+ + H K D+++ GV+ E L G+
Sbjct: 173 LDYLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVGK 206
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 884 IAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNA--RVADYCLHRLMTQAGTIEQIL 941
I V G+ YLH + H +LK N+LL+ + +A ++ D+ L + +++ L
Sbjct: 141 IIKQVLSGVTYLH-KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERL 199
Query: 942 DAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
G Y APE+ K K DV++ GVIL LL G
Sbjct: 200 --GTAYYIAPEVLRKKYDE---KCDVWSIGVILFILLAG 233
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 43.1 bits (100), Expect = 8e-04, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 18/156 (11%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ LIL +Y G++ R +K + +
Sbjct: 67 HLRHPNILRLYGYFHDATR-VYLIL-EYAPLGTVY-----RELQKLSKFDEQRTATYITE 119
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY--CLHRLMTQAGTIEQILDAGV 945
+A L+Y H R + H ++K N+LL G ++AD+ +H ++ T+ G
Sbjct: 120 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTL-----CGT 172
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
L Y PE+ + H K D+++ GV+ E L G+
Sbjct: 173 LDYLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVGK 206
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 108/266 (40%), Gaps = 39/266 (14%)
Query: 85 ADLSVFSNLSMLVKLSMSNNSISGVIP--------------------DNIGDFKSLEFLD 124
D++ NL+ LV + M+NN I+ + P D + + +L L+
Sbjct: 76 TDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLE 135
Query: 125 VSDNLFSSSLPSGIGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPP 184
+S N S S + L SLQ L+ + N + L P ++ L +++ LD+S N S
Sbjct: 136 LSSNTISD--ISALSGLTSLQQLNFSSNQVTDLKP--LANLTTLERLDISSNKVSD--IS 189
Query: 185 ALTRXXXXXXXXXXXXGFSKRIPRGFELILGLQVLDFHGNKLDGHLDGEFFLLTNASHID 244
L + S P G ++ L L +GN+L G LTN + +D
Sbjct: 190 VLAKLTNLESLIATNNQISDITPLG--ILTNLDELSLNGNQLKDI--GTLASLTNLTDLD 245
Query: 245 FSGNMFVGSSSQKFLPGLSQSVQYLNLSLNQLTGSLVNGGELQLFENLKVLDLSYNQLTG 304
+ N S+ L GL++ + L L NQ++ N L L L+L+ NQL
Sbjct: 246 LANNQI---SNLAPLSGLTKLTE-LKLGANQIS----NISPLAGLTALTNLELNENQLED 297
Query: 305 ELPGFNFVYELQVLKLSNNRFSGFIP 330
P N L L L N S P
Sbjct: 298 ISPISNL-KNLTYLTLYFNNISDISP 322
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 14/206 (6%)
Query: 362 NLHMLNLSSNGLTGELPLLTGSCAVLDLSNNQFEGNLSRILKWGNIEYLDLSRNHLTGSI 421
NL +N S+N LT PL + V L NN +++ + N+ L L N +T
Sbjct: 64 NLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDID 123
Query: 422 PEETPQFLRXXXXXXXXXXXXXXXPKVIIQYQKLRVLDLSFNHLDGPFLTNLLNSSTLQE 481
P + L + L+ L+ S N + L L N +TL+
Sbjct: 124 PLKNLTNLNRLELSSNTISDISALSGL----TSLQQLNFSSNQVTD--LKPLANLTTLER 177
Query: 482 LHLADNLLTGVLDFSP-PSVSNLQVLDLSHNRLNGYFPDRLGSLTGLKVLCLAGNNISGS 540
L ++ N V D S ++NL+ L ++N+++ P LG LT L L L GN +
Sbjct: 178 LDISSN---KVSDISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD- 231
Query: 541 LPTSMANMTSLSSLVISQNHFTGPLP 566
++A++T+L+ L ++ N + P
Sbjct: 232 -IGTLASLTNLTDLDLANNQISNLAP 256
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ ++ +Y G++ R +K + +
Sbjct: 69 HLRHPNILRLYGYFHDATR--VYLILEYAPLGTVY-----RELQKLSKFDEQRTATYITE 121
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY--CLHRLMTQAGTIEQILDAGV 945
+A L+Y H R + H ++K N+LL G ++AD+ +H ++ T+ G
Sbjct: 122 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTL-----CGT 174
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
L Y PE+ + H K D+++ GV+ E L G+
Sbjct: 175 LDYLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVGK 208
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ ++ +Y G++ R +K + +
Sbjct: 65 HLRHPNILRLYGYFHDATR--VYLILEYAPLGTVY-----RELQKLSKFDEQRTATYITE 117
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY--CLHRLMTQAGTIEQILDAGV 945
+A L+Y H R + H ++K N+LL G ++AD+ +H ++ T+ G
Sbjct: 118 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRDTL-----CGT 170
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
L Y PE+ + H K D+++ GV+ E L G+
Sbjct: 171 LDYLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVGK 204
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 31/163 (19%)
Query: 828 NIRHPNVVGL------RGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQR 881
+ HPN++ L +GY++ ++ + + G L + R +
Sbjct: 106 QLDHPNIMKLYEFFEDKGYFY--------LVGEVYTGGELFDEIISRK-----RFSEVDA 152
Query: 882 LKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGP--DLNARVADYCLHRLMTQAGTIEQ 939
+I V G+ Y+H ++ V H +LK N+LL+ D N R+ D+ L + ++
Sbjct: 153 ARIIRQVLSGITYMHKNKIV-HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 211
Query: 940 ILDAGVLGYRAPELAASKKPHPSF--KSDVYAFGVILLELLTG 980
+ G Y APE+ H ++ K DV++ GVIL LL+G
Sbjct: 212 KI--GTAYYIAPEVL-----HGTYDEKCDVWSTGVILYILLSG 247
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ ++ +Y G++ R +K + +
Sbjct: 90 HLRHPNILRLYGYFHDATR--VYLILEYAPLGTVY-----RELQKLSKFDEQRTATYITE 142
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY--CLHRLMTQAGTIEQILDAGV 945
+A L+Y H R + H ++K N+LL G ++AD+ +H ++ T+ G
Sbjct: 143 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTL-----CGT 195
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
L Y PE+ + H K D+++ GV+ E L G+
Sbjct: 196 LDYLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVGK 229
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 43.1 bits (100), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 882 LKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQIL 941
L V +A+G+NYL DR + H +L A N+L+ P + ++ D+ L +L+ A E
Sbjct: 127 LNWCVQIAKGMNYLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLG-AEEKEYHA 183
Query: 942 DAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ G + + L + + +SDV+++GV + EL+T
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 43.1 bits (100), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 882 LKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQIL 941
L V +A+G+NYL DR + H +L A N+L+ P + ++ D+ L +L+ A E
Sbjct: 127 LNWCVQIAKGMNYLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLG-AEEKEYHA 183
Query: 942 DAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ G + + L + + +SDV+++GV + EL+T
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 43.1 bits (100), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 882 LKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQIL 941
L V +A+G+NYL DR + H +L A N+L+ P + ++ D+ L +L+ A E
Sbjct: 120 LNWCVQIAKGMNYLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLG-AEEKEYHA 176
Query: 942 DAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ G + + L + + +SDV+++GV + EL+T
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 43.1 bits (100), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 849 KLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLNYLHFDRAVPHGNL 906
+ IL + ++ G L SFL + R P L L +A D+A G YL + + H ++
Sbjct: 123 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDI 181
Query: 907 KATNILLD--GPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFK 964
A N LL GP A++ D+ + R + +A + A + P A + S K
Sbjct: 182 AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS-K 240
Query: 965 SDVYAFGVILLELLT 979
+D ++FGV+L E+ +
Sbjct: 241 TDTWSFGVLLWEIFS 255
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 43.1 bits (100), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 31/163 (19%)
Query: 828 NIRHPNVVGL------RGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQR 881
+ HPN++ L +GY++ ++ + + G L + R +
Sbjct: 105 QLDHPNIMKLYEFFEDKGYFY--------LVGEVYTGGELFDEIISRK-----RFSEVDA 151
Query: 882 LKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGP--DLNARVADYCLHRLMTQAGTIEQ 939
+I V G+ Y+H ++ V H +LK N+LL+ D N R+ D+ L + ++
Sbjct: 152 ARIIRQVLSGITYMHKNKIV-HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 210
Query: 940 ILDAGVLGYRAPELAASKKPHPSF--KSDVYAFGVILLELLTG 980
+ G Y APE+ H ++ K DV++ GVIL LL+G
Sbjct: 211 KI--GTAYYIAPEVL-----HGTYDEKCDVWSTGVILYILLSG 246
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 43.1 bits (100), Expect = 9e-04, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 883 KIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILD 942
K+ V + + L YL V H ++K +NILLD ++ D+ + + ++
Sbjct: 128 KMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG-QIKLCDFGISGRLVDDKAKDR--S 184
Query: 943 AGVLGYRAPEL---AASKKPHPSFKSDVYAFGVILLELLTGR 981
AG Y APE KP ++DV++ G+ L+EL TG+
Sbjct: 185 AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 43.1 bits (100), Expect = 9e-04, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ LIL +Y G++ R +K + +
Sbjct: 68 HLRHPNILRLYGYFHDATR-VYLIL-EYAPLGTVY-----RELQKLSRFDEQRTATYITE 120
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY--CLHRLMTQAGTIEQILDAGV 945
+A L+Y H R + H ++K N+LL G + ++AD+ +H ++ T+ G
Sbjct: 121 LANALSYCHSKRVI-HRDIKPENLLL-GSNGELKIADFGWSVHAPSSRRTTL-----CGT 173
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
L Y PE+ + H K D+++ GV+ E L G
Sbjct: 174 LDYLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVG 206
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 849 KLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLNYLHFDRAVPHGNL 906
+ IL + ++ G L SFL + R P L L +A D+A G YL + + H ++
Sbjct: 123 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDI 181
Query: 907 KATNILLD--GPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFK 964
A N LL GP A++ D+ + R + +A + A + P A + S K
Sbjct: 182 AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS-K 240
Query: 965 SDVYAFGVILLELLT 979
+D ++FGV+L E+ +
Sbjct: 241 TDTWSFGVLLWEIFS 255
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 849 KLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLNYLHFDRAVPHGNL 906
+ IL + ++ G L SFL + R P L L +A D+A G YL + + H ++
Sbjct: 100 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDI 158
Query: 907 KATNILLD--GPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFK 964
A N LL GP A++ D+ + R + +A + A + P A + S K
Sbjct: 159 AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS-K 217
Query: 965 SDVYAFGVILLELLT 979
+D ++FGV+L E+ +
Sbjct: 218 TDTWSFGVLLWEIFS 232
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 849 KLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLNYLHFDRAVPHGNL 906
+ IL + ++ G L SFL + R P L L +A D+A G YL + + H ++
Sbjct: 109 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDI 167
Query: 907 KATNILLD--GPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFK 964
A N LL GP A++ D+ + R + +A + A + P A + S K
Sbjct: 168 AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS-K 226
Query: 965 SDVYAFGVILLELLT 979
+D ++FGV+L E+ +
Sbjct: 227 TDTWSFGVLLWEIFS 241
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ ++ +Y G++ R +K + +
Sbjct: 64 HLRHPNILRLYGYFHDATR--VYLILEYAPLGTVY-----RELQKLSKFDEQRTATYITE 116
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY--CLHRLMTQAGTIEQILDAGV 945
+A L+Y H R + H ++K N+LL G ++AD+ +H ++ T+ G
Sbjct: 117 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTL-----CGT 169
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
L Y PE+ + H K D+++ GV+ E L G+
Sbjct: 170 LDYLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVGK 203
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 849 KLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLNYLHFDRAVPHGNL 906
+ IL + ++ G L SFL + R P L L +A D+A G YL + + H ++
Sbjct: 108 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDI 166
Query: 907 KATNILLD--GPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFK 964
A N LL GP A++ D+ + R + +A + A + P A + S K
Sbjct: 167 AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS-K 225
Query: 965 SDVYAFGVILLELLT 979
+D ++FGV+L E+ +
Sbjct: 226 TDTWSFGVLLWEIFS 240
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 18/156 (11%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ LIL +Y G++ R +K + +
Sbjct: 81 HLRHPNILRLYGYFHDATR-VYLIL-EYAPLGTVY-----RELQKLSKFDEQRTATYITE 133
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY--CLHRLMTQAGTIEQILDAGV 945
+A L+Y H R + H ++K N+LL G ++AD+ +H ++ T+ G
Sbjct: 134 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTL-----CGT 186
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
L Y PE+ + H K D+++ GV+ E L G+
Sbjct: 187 LDYLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVGK 220
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ LIL +Y G + L +K + +
Sbjct: 69 HLRHPNILRLYGYFHDATR-VYLIL-EYAPRGEVYKEL-----QKLSKFDEQRTATYITE 121
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY--CLHRLMTQAGTIEQILDAGV 945
+A L+Y H R + H ++K N+LL G ++AD+ +H ++ T+ G
Sbjct: 122 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTL-----CGT 174
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
L Y PE+ + H K D+++ GV+ E L G+
Sbjct: 175 LDYLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVGK 208
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 31/160 (19%)
Query: 831 HPNVVGL------RGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKI 884
HPN++ L +GY++ ++ + + G L + R + +I
Sbjct: 85 HPNIMKLYEFFEDKGYFY--------LVGEVYTGGELFDEIISRK-----RFSEVDAARI 131
Query: 885 AVDVARGLNYLHFDRAVPHGNLKATNILLDGP--DLNARVADYCLHRLMTQAGTIEQILD 942
V G+ Y+H ++ V H +LK N+LL+ D N R+ D+ L + ++ +
Sbjct: 132 IRQVLSGITYMHKNKIV-HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI- 189
Query: 943 AGVLGYRAPELAASKKPHPSF--KSDVYAFGVILLELLTG 980
G Y APE+ H ++ K DV++ GVIL LL+G
Sbjct: 190 -GTAYYIAPEVL-----HGTYDEKCDVWSTGVILYILLSG 223
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 849 KLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLNYLHFDRAVPHGNL 906
+ IL + ++ G L SFL + R P L L +A D+A G YL + + H ++
Sbjct: 109 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDI 167
Query: 907 KATNILLD--GPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFK 964
A N LL GP A++ D+ + R + +A + A + P A + S K
Sbjct: 168 AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS-K 226
Query: 965 SDVYAFGVILLELLT 979
+D ++FGV+L E+ +
Sbjct: 227 TDTWSFGVLLWEIFS 241
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 849 KLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLNYLHFDRAVPHGNL 906
+ IL + ++ G L SFL + R P L L +A D+A G YL + + H ++
Sbjct: 115 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDI 173
Query: 907 KATNILLD--GPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFK 964
A N LL GP A++ D+ + R + +A + A + P A + S K
Sbjct: 174 AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS-K 232
Query: 965 SDVYAFGVILLELLT 979
+D ++FGV+L E+ +
Sbjct: 233 TDTWSFGVLLWEIFS 247
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 86/208 (41%), Gaps = 14/208 (6%)
Query: 783 VLGRSSHGTSYRATL--ENGMFL--TVKWLREGV--AKQRXXXXXXXXXXXNIRHPNVVG 836
+LG+ G+ A L E+G F+ VK L+ + + HP+V
Sbjct: 30 MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89
Query: 837 LRGYYWGPTQHEKL----ILSDYISPGSLASFLY-DRPGRKGPPLTWAQRLKIAVDVARG 891
L G +L ++ ++ G L +FL R G L ++ VD+A G
Sbjct: 90 LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACG 149
Query: 892 LNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAP 951
+ YL R H +L A N +L D+ VAD+ L R + Q A L +
Sbjct: 150 MEYLS-SRNFIHRDLAARNCML-AEDMTVCVADFGLSRKIYSGDYYRQGC-ASKLPVKWL 206
Query: 952 ELAASKKPHPSFKSDVYAFGVILLELLT 979
L + + SDV+AFGV + E++T
Sbjct: 207 ALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 849 KLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLNYLHFDRAVPHGNL 906
+ IL + ++ G L SFL + R P L L +A D+A G YL + + H ++
Sbjct: 125 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDI 183
Query: 907 KATNILLD--GPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFK 964
A N LL GP A++ D+ + R + +A + A + P A + S K
Sbjct: 184 AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS-K 242
Query: 965 SDVYAFGVILLELLT 979
+D ++FGV+L E+ +
Sbjct: 243 TDTWSFGVLLWEIFS 257
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 803 LTVKWLREGV--AKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGS 860
+ VK L+EG ++ R H NVV L G P ++++++ G+
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG-PLMVITEFCKFGN 109
Query: 861 LASFLYDR-----PGRKGPP------LTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKAT 909
L+++L + P + P LT + + VA+G+ +L R H +L A
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA-SRKCIHRDLAAR 168
Query: 910 NILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV-LGYRAPELAASKKPHPSFKSDVY 968
NILL ++ ++ D+ L R + + + DA + L + APE + + +SDV+
Sbjct: 169 NILLSEKNV-VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVY--TIQSDVW 225
Query: 969 AFGVILLELLT 979
+FGV+L E+ +
Sbjct: 226 SFGVLLWEIFS 236
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 18/155 (11%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ ++ +Y G++ R +K + +
Sbjct: 68 HLRHPNILRLYGYFHDATR--VYLILEYAPLGTVY-----RELQKLSRFDEQRTATYITE 120
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY--CLHRLMTQAGTIEQILDAGV 945
+A L+Y H R + H ++K N+LL G + ++AD+ +H ++ T+ G
Sbjct: 121 LANALSYCHSKRVI-HRDIKPENLLL-GSNGELKIADFGWSVHAPSSRRDTL-----CGT 173
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
L Y PE+ + H K D+++ GV+ E L G
Sbjct: 174 LDYLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVG 206
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 14/106 (13%)
Query: 455 LRVLDLSFNHLDGPFLTNL-LNSSTLQELHLADNLLTGVLDFSPPSVSNLQVLDLSHNRL 513
L++ ++S N FLT L LN ++L EL ++SNL+VLDLSHNRL
Sbjct: 234 LQIFNISANIFKYDFLTRLYLNGNSLTELPAEIK-----------NLSNLRVLDLSHNRL 282
Query: 514 NGYFPDRLGSLTGLKVLCLAGNNISGSLPTSMANMTSLSSLVISQN 559
P LGS LK N ++ +LP N+ +L L + N
Sbjct: 283 TS-LPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGN 326
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 11/71 (15%)
Query: 116 DFKSLEFLDVSDNLFSSSLPSGIGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSH 175
D +L+ ++S N+F K + L L L GN+ + L P + L +++ LDLSH
Sbjct: 230 DLSNLQIFNISANIF---------KYDFLTRLYLNGNSLTEL-PAEIKNLSNLRVLDLSH 279
Query: 176 NSFSGSLPPAL 186
N + SLP L
Sbjct: 280 NRLT-SLPAEL 289
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 118/288 (40%), Gaps = 44/288 (15%)
Query: 782 EVLGRSSHGTSYRATLE-NGMFLTVKWLREGVAKQ-RXXXXXXXXXXXNIRHPNVVGLRG 839
E +GR + G + L + + VK RE + + HPN+V L G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 840 YYWGPTQHEKL-ILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFD 898
TQ + + I+ + + G +FL +G L L++ D A G+ YL
Sbjct: 180 VC---TQKQPIYIVMELVQGGDFLTFLRT----EGARLRVKTLLQMVGDAAAGMEYLE-S 231
Query: 899 RAVPHGNLKATNILLDGPDLNARVADYCLHR-----LMTQAGTIEQILDAGVLGYRAPEL 953
+ H +L A N L+ ++ +++D+ + R + +G + Q+ + + APE
Sbjct: 232 KCCIHRDLAARNCLVTEKNV-LKISDFGMSREEADGVXAASGGLRQV----PVKWTAPE- 285
Query: 954 AASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISGEGAGVDLTDWMQLKVAEGHGS-DC 1012
A S +SDV++FG++L E + G +L++ + E G C
Sbjct: 286 -ALNYGRYSSESDVWSFGILLWETFS--------LGASPYPNLSNQQTREFVEKGGRLPC 336
Query: 1013 FDAAVMPEMVNPAAEKGMKEVLGIALRCIRSVSERPGIKTIYEDLSSI 1060
PE+ A + M++ +RP TIY++L SI
Sbjct: 337 ------PELCPDAVFRLMEQCWAY------EPGQRPSFSTIYQELQSI 372
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ LIL +Y G++ R +K + +
Sbjct: 64 HLRHPNILRLYGYFHDATR-VYLIL-EYAPLGTVY-----RELQKLSKFDEQRTATYITE 116
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+A L+Y H R + H ++K N+LL G ++AD+ A + + G L
Sbjct: 117 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIADFGWS---VHAPSSRRTXLCGTLD 171
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y PE+ + H K D+++ GV+ E L G+
Sbjct: 172 YLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVGK 203
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 118/288 (40%), Gaps = 44/288 (15%)
Query: 782 EVLGRSSHGTSYRATLE-NGMFLTVKWLREGVAKQ-RXXXXXXXXXXXNIRHPNVVGLRG 839
E +GR + G + L + + VK RE + + HPN+V L G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 840 YYWGPTQHEKL-ILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFD 898
TQ + + I+ + + G +FL +G L L++ D A G+ YL
Sbjct: 180 VC---TQKQPIYIVMELVQGGDFLTFLRT----EGARLRVKTLLQMVGDAAAGMEYLE-S 231
Query: 899 RAVPHGNLKATNILLDGPDLNARVADYCLHR-----LMTQAGTIEQILDAGVLGYRAPEL 953
+ H +L A N L+ ++ +++D+ + R + +G + Q+ + + APE
Sbjct: 232 KCCIHRDLAARNCLVTEKNV-LKISDFGMSREEADGVYAASGGLRQV----PVKWTAPE- 285
Query: 954 AASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISGEGAGVDLTDWMQLKVAEGHGS-DC 1012
A S +SDV++FG++L E + G +L++ + E G C
Sbjct: 286 -ALNYGRYSSESDVWSFGILLWETFS--------LGASPYPNLSNQQTREFVEKGGRLPC 336
Query: 1013 FDAAVMPEMVNPAAEKGMKEVLGIALRCIRSVSERPGIKTIYEDLSSI 1060
PE+ A + M++ +RP TIY++L SI
Sbjct: 337 ------PELCPDAVFRLMEQCWAY------EPGQRPSFSTIYQELQSI 372
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 25/196 (12%)
Query: 867 DRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYC 926
D G P+T + + VARG+ +L R H +L A NILL ++ ++ D+
Sbjct: 187 DSDGFYKEPITMEDLISYSFQVARGMEFLS-SRKCIHRDLAARNILLSENNV-VKICDFG 244
Query: 927 LHRLMTQAGTIEQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGD 985
L R + + + D + L + APE K S KSDV+++GV+L E+ +
Sbjct: 245 LARDIYKNPDYVRKGDTRLPLKWMAPESIFDK--IYSTKSDVWSYGVLLWEIFS------ 296
Query: 986 VISGEGAGVDLTDWMQLKVAEGHGSDCFDAAVMPEMVNPAAEKGMKEVLGIALRCI-RSV 1044
+ GV + + ++ EG M A E E+ I L C R
Sbjct: 297 LGGSPYPGVQMDEDFCSRLREG-------------MRMRAPEYSTPEIYQIMLDCWHRDP 343
Query: 1045 SERPGIKTIYEDLSSI 1060
ERP + E L +
Sbjct: 344 KERPRFAELVEKLGDL 359
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ ++ +Y G++ R +K + +
Sbjct: 68 HLRHPNILRLYGYFHDATR--VYLILEYAPLGTVY-----RELQKLSKFDEQRTATYITE 120
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY--CLHRLMTQAGTIEQILDAGV 945
+A L+Y H R + H ++K N+LL G ++AD+ +H ++ T+ G
Sbjct: 121 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTL-----CGT 173
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
L Y PE+ + H K D+++ GV+ E L G+
Sbjct: 174 LDYLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVGK 207
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 9/129 (6%)
Query: 850 LILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKAT 909
I ++ G+L ++ R G K L L++ + +G++Y+H + + H +LK +
Sbjct: 110 FIQMEFCDKGTLEQWIEKRRGEK---LDKVLALELFEQITKGVDYIHSKKLI-HRDLKPS 165
Query: 910 NILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFKSDVYA 969
NI L ++ D+ L + G ++ G L Y +PE +S+ + D+YA
Sbjct: 166 NIFLVDTK-QVKIGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGK--EVDLYA 220
Query: 970 FGVILLELL 978
G+IL ELL
Sbjct: 221 LGLILAELL 229
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ ++ +Y G++ R +K + +
Sbjct: 65 HLRHPNILRLYGYFHDATR--VYLILEYAPLGTVY-----RELQKLSKFDEQRTATYITE 117
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY--CLHRLMTQAGTIEQILDAGV 945
+A L+Y H R + H ++K N+LL G ++AD+ H ++ T+ +G
Sbjct: 118 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIADFGWSCHAPSSRRTTL-----SGT 170
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
L Y PE+ + H K D+++ GV+ E L G+
Sbjct: 171 LDYLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVGK 204
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 849 KLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLNYLHFDRAVPHGNL 906
+ IL + ++ G L SFL + R P L L +A D+A G YL + + H ++
Sbjct: 135 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDI 193
Query: 907 KATNILLD--GPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFK 964
A N LL GP A++ D+ + R + +A + A + P A + S K
Sbjct: 194 AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS-K 252
Query: 965 SDVYAFGVILLELLT 979
+D ++FGV+L E+ +
Sbjct: 253 TDTWSFGVLLWEIFS 267
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 883 KIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILD 942
KIAV + + L +LH +V H ++K +N+L++ + D+ + + + + +D
Sbjct: 140 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALG-QVKXCDFGISGYLVD--DVAKDID 196
Query: 943 AGVLGYRAPELAASK--KPHPSFKSDVYAFGVILLEL 977
AG Y APE + + S KSD+++ G+ +EL
Sbjct: 197 AGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 25/215 (11%)
Query: 779 APAEVLGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLR 838
A E +G+ +G +R L +G + VK + +Q +RH N++G
Sbjct: 11 ALVECVGKGRYGEVWRG-LWHGESVAVK-IFSSRDEQSWFRETEIYNTVLLRHDNILGFI 68
Query: 839 GYYWGP--TQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLH 896
+ + +++ Y GSL FL + P L L++AV A GL +LH
Sbjct: 69 ASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLE--PHLA----LRLAVSAACGLAHLH 122
Query: 897 FD-------RAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILD---AGVL 946
+ A+ H + K+ N+L+ +L +AD L + +Q I + G
Sbjct: 123 VEIFGTQGKPAIAHRDFKSRNVLVKS-NLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTK 181
Query: 947 GYRAPELAASKKPHPSFKS----DVYAFGVILLEL 977
Y APE+ + F+S D++AFG++L E+
Sbjct: 182 RYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ LIL +Y G++ R +K + +
Sbjct: 67 HLRHPNILRLYGYFHDATR-VYLIL-EYAPLGTVY-----RELQKLSKFDEQRTATYITE 119
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+A L+Y H R + H ++K N+LL G ++AD+ A + + G L
Sbjct: 120 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIADFGWS---VHAPSSRRXXLCGTLD 174
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y PE+ + H K D+++ GV+ E L G+
Sbjct: 175 YLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVGK 206
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 803 LTVKWLREGV--AKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGS 860
+ VK L+EG ++ R H NVV L G P +++ ++ G+
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG-PLMVIVEFCKFGN 120
Query: 861 LASFLYDR-----PGRKGPP------LTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKAT 909
L+++L + P ++ P LT + + VA+G+ +L R H +L A
Sbjct: 121 LSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA-SRKCIHRDLAAR 179
Query: 910 NILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV-LGYRAPELAASKKPHPSFKSDVY 968
NILL ++ ++ D+ L R + + + DA + L + APE + + +SDV+
Sbjct: 180 NILLSEKNV-VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY--TIQSDVW 236
Query: 969 AFGVILLELLT 979
+FGV+L E+ +
Sbjct: 237 SFGVLLWEIFS 247
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 803 LTVKWLREGV--AKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGS 860
+ VK L+EG ++ R H NVV L G P ++++++ G+
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG-PLMVITEFCKFGN 109
Query: 861 LASFLYDR-----PGRKGPP------LTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKAT 909
L+++L + P + P LT + + VA+G+ +L R H +L A
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA-SRKCIHRDLAAR 168
Query: 910 NILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV-LGYRAPELAASKKPHPSFKSDVY 968
NILL ++ ++ D+ L R + + + DA + L + APE + + +SDV+
Sbjct: 169 NILLSEKNV-VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY--TIQSDVW 225
Query: 969 AFGVILLELLT 979
+FGV+L E+ +
Sbjct: 226 SFGVLLWEIFS 236
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 803 LTVKWLREGV--AKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGS 860
+ VK L+EG ++ R H NVV L G P ++++++ G+
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG-PLMVITEFCKFGN 109
Query: 861 LASFLYDR-----PGRKGPP------LTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKAT 909
L+++L + P + P LT + + VA+G+ +L R H +L A
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA-SRKCIHRDLAAR 168
Query: 910 NILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV-LGYRAPELAASKKPHPSFKSDVY 968
NILL ++ ++ D+ L R + + + DA + L + APE + + +SDV+
Sbjct: 169 NILLSEKNV-VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY--TIQSDVW 225
Query: 969 AFGVILLELLT 979
+FGV+L E+ +
Sbjct: 226 SFGVLLWEIFS 236
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ LIL +Y G++ R +K + +
Sbjct: 64 HLRHPNILRLYGYFHDATR-VYLIL-EYAPLGTVY-----RELQKLSKFDEQRTATYITE 116
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+A L+Y H R + H ++K N+LL G ++AD+ A + + G L
Sbjct: 117 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIADFGWS---VHAPSSRRXXLCGTLD 171
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y PE+ + H K D+++ GV+ E L G+
Sbjct: 172 YLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVGK 203
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 42.4 bits (98), Expect = 0.002, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ LIL +Y G++ R +K + +
Sbjct: 66 HLRHPNILRLYGYFHDATR-VYLIL-EYAPLGTVY-----RELQKLSKFDEQRTATYITE 118
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+A L+Y H R + H ++K N+LL G ++AD+ A + + G L
Sbjct: 119 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIADFGWS---VHAPSSRRXXLCGTLD 173
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y PE+ + H K D+++ GV+ E L G+
Sbjct: 174 YLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVGK 205
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ LIL +Y G++ R +K + +
Sbjct: 64 HLRHPNILRLYGYFHDATR-VYLIL-EYAPLGTVY-----RELQKLSKFDEQRTATYITE 116
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+A L+Y H R + H ++K N+LL G ++AD+ A + + G L
Sbjct: 117 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIADFGWS---VHAPSSRRAALCGTLD 171
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y PE+ + H K D+++ GV+ E L G+
Sbjct: 172 YLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVGK 203
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 831 HPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVAR 890
HP++V L G T++ I+ + + G L SFL R L A + A ++
Sbjct: 70 HPHIVKLIGVI---TENPVWIIMELCTLGELRSFLQVRKF----SLDLASLILYAYQLST 122
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRA 950
L YL R V H ++ A N+L+ D ++ D+ L R M + + + + A
Sbjct: 123 ALAYLESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTXXKASKGKLPIKWMA 180
Query: 951 PELAASKKPHPSFKSDVYAFGVILLELL 978
PE ++ + SDV+ FGV + E+L
Sbjct: 181 PESINFRRFTSA--SDVWMFGVCMWEIL 206
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 34/165 (20%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN+V + PT I+ +Y S G L ++R G + + D
Sbjct: 71 SLRHPNIVRFKEVILTPTHLA--IVMEYASGGEL----FERICNAG---------RFSED 115
Query: 888 VAR--------GLNYLHFDRAVPHGNLKATNILLDG-PDLNARVADYCLHR---LMTQAG 935
AR G++Y H V H +LK N LLDG P ++AD+ + L +Q
Sbjct: 116 EARFFFQQLISGVSYAH-AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPK 174
Query: 936 TIEQILDAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
+ G Y APE+ KK + +DV++ GV L +L G
Sbjct: 175 SA-----VGTPAYIAPEVLL-KKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ ++ +Y G++ R +K + +
Sbjct: 67 HLRHPNILRLYGYFHDATR--VYLILEYAPLGTVY-----RELQKLSKFDEQRTATYITE 119
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+A L+Y H R + H ++K N+LL G ++AD+ A + + G L
Sbjct: 120 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIADFG---WSVHAPSSRRAALCGTLD 174
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y PE+ + H K D+++ GV+ E L G+
Sbjct: 175 YLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVGK 206
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ LIL +Y G++ R +K + +
Sbjct: 69 HLRHPNILRLYGYFHDATR-VYLIL-EYAPLGTVY-----RELQKLSKFDEQRTATYITE 121
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY--CLHRLMTQAGTIEQILDAGV 945
+A L+Y H R + H ++K N+LL G ++AD+ +H ++ T+ G
Sbjct: 122 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTL-----CGT 174
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
L Y PE + H K D+++ GV+ E L G+
Sbjct: 175 LDYLPPEXIEGRX-HDE-KVDLWSLGVLCYEFLVGK 208
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 831 HPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVAR 890
HP++V L G T++ I+ + + G L SFL R L A + A ++
Sbjct: 450 HPHIVKLIGVI---TENPVWIIMELCTLGELRSFLQVRKF----SLDLASLILYAYQLST 502
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRA 950
L YL R V H ++ A N+L+ D ++ D+ L R M + + + + A
Sbjct: 503 ALAYLESKRFV-HRDIAARNVLVSATDC-VKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 560
Query: 951 PELAASKKPHPSFKSDVYAFGVILLELL 978
PE ++ + SDV+ FGV + E+L
Sbjct: 561 PESINFRRFTSA--SDVWMFGVCMWEIL 586
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 18/156 (11%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++ H ++V L G G + +++ Y+ GSL + G GP L L V
Sbjct: 89 SLDHAHIVRLLGLCPGSSLQ---LVTQYLPLGSLLDHVRQHRGALGPQLL----LNWGVQ 141
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV-- 945
+A+G+ YL + + H NL A N+LL P +VAD+ + L+ +Q+L +
Sbjct: 142 IAKGMYYLE-EHGMVHRNLAARNVLLKSPS-QVQVADFGVADLLPPDD--KQLLYSEAKT 197
Query: 946 -LGYRAPE-LAASKKPHPSFKSDVYAFGVILLELLT 979
+ + A E + K H +SDV+++GV + EL+T
Sbjct: 198 PIKWMALESIHFGKYTH---QSDVWSYGVTVWELMT 230
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ ++ +Y G++ R +K + +
Sbjct: 64 HLRHPNILRLYGYFHDATR--VYLILEYAPLGTVY-----RELQKLSKFDEQRTATYITE 116
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+A L+Y H R + H ++K N+LL G ++AD+ A + + G L
Sbjct: 117 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIADFG---WSVHAPSSRRTELCGTLD 171
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y PE+ + H K D+++ GV+ E L G+
Sbjct: 172 YLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVGK 203
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 34/213 (15%)
Query: 782 EVLGRSSHGTSY---RATL-ENGMFLTVKWLREGVAK--QRXXXXXXXXXXXNIRHPNVV 835
+VLG+ S G + + T ++G +K L++ K R ++ HP VV
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYL 895
L +Y T+ + ++ D++ G L + L K T ++A GL++L
Sbjct: 94 KL--HYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFTEEDVKFYLAELALGLDHL 146
Query: 896 HFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILD--------AGVLG 947
H + + +LK NILLD H +T G ++ +D G +
Sbjct: 147 H-SLGIIYRDLKPENILLDEEG----------HIKLTDFGLSKEAIDHEKKAYSFCGTVE 195
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
Y APE+ +++ H S +D +++GV++ E+LTG
Sbjct: 196 YMAPEVV-NRQGH-SHSADWWSYGVLMFEMLTG 226
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 50/206 (24%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 782 EVLGRSSHGTSYRAT-LENG----MFLTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVV 835
+VLG + GT Y+ + G + + +K LRE + K ++ +P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLN 893
L G T +++ + G L ++ + G L W V +A+G+N
Sbjct: 83 RLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMN 133
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
YL DR + H +L A N+L+ P + ++ D+ +L+ A E + G + + L
Sbjct: 134 YLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLG-AEEKEYHAEGGKVPIKWMAL 190
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
+ + +SDV+++GV + EL+T
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 50/206 (24%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 782 EVLGRSSHGTSYRAT-LENG----MFLTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVV 835
+VLG + GT Y+ + G + + +K LRE + K ++ +P+V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLN 893
L G T +++ + G L ++ + G L W V +A+G+N
Sbjct: 88 RLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMN 138
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
YL DR + H +L A N+L+ P + ++ D+ +L+ A E + G + + L
Sbjct: 139 YLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLG-AEEKEYHAEGGKVPIKWMAL 195
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
+ + +SDV+++GV + EL+T
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 50/206 (24%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 782 EVLGRSSHGTSYRAT-LENG----MFLTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVV 835
+VLG + GT Y+ + G + + +K LRE + K ++ +P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLN 893
L G T +++ + G L ++ + G L W V +A+G+N
Sbjct: 81 RLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMN 131
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
YL DR + H +L A N+L+ P + ++ D+ +L+ A E + G + + L
Sbjct: 132 YLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLG-AEEKEYHAEGGKVPIKWMAL 188
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
+ + +SDV+++GV + EL+T
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 14/152 (9%)
Query: 831 HPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVAR 890
HPNV+ + G P +++ + GSL + L++ + +Q +K A+D AR
Sbjct: 66 HPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFV---VDQSQAVKFALDXAR 122
Query: 891 GLNYLH-FDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYR 949
G +LH + +P L + ++ +D D AR++ + G +
Sbjct: 123 GXAFLHTLEPLIPRHALNSRSVXIDE-DXTARISXADVKFSFQSPGR------XYAPAWV 175
Query: 950 APELAASKKPHPSFK--SDVYAFGVILLELLT 979
APE A KKP + + +D ++F V+L EL+T
Sbjct: 176 APE-ALQKKPEDTNRRSADXWSFAVLLWELVT 206
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 22/170 (12%)
Query: 829 IRHPNVVGLRGY--YWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAV 886
+RH N++G T + ++SDY GSL +L +T +K+A+
Sbjct: 55 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT------VTVEGMIKLAL 108
Query: 887 DVARGLNYLHFD-------RAVPHGNLKATNILL--DGPDLNARVADYCLHRLMTQAGTI 937
A GL +LH + A+ H +LK+ NIL+ +G A + H T I
Sbjct: 109 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 168
Query: 938 EQILDAGVLGYRAPEL---AASKKPHPSFK-SDVYAFGVILLELLTGRCA 983
G Y APE+ + + K SFK +D+YA G++ E + RC+
Sbjct: 169 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCS 217
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 22/170 (12%)
Query: 829 IRHPNVVGLRGY--YWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAV 886
+RH N++G T + ++SDY GSL +L +T +K+A+
Sbjct: 54 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT------VTVEGMIKLAL 107
Query: 887 DVARGLNYLHFD-------RAVPHGNLKATNILL--DGPDLNARVADYCLHRLMTQAGTI 937
A GL +LH + A+ H +LK+ NIL+ +G A + H T I
Sbjct: 108 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 167
Query: 938 EQILDAGVLGYRAPEL---AASKKPHPSFK-SDVYAFGVILLELLTGRCA 983
G Y APE+ + + K SFK +D+YA G++ E + RC+
Sbjct: 168 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCS 216
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 22/170 (12%)
Query: 829 IRHPNVVGLRGY--YWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAV 886
+RH N++G T + ++SDY GSL +L +T +K+A+
Sbjct: 80 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT------VTVEGMIKLAL 133
Query: 887 DVARGLNYLHFD-------RAVPHGNLKATNILL--DGPDLNARVADYCLHRLMTQAGTI 937
A GL +LH + A+ H +LK+ NIL+ +G A + H T I
Sbjct: 134 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 193
Query: 938 EQILDAGVLGYRAPEL---AASKKPHPSFK-SDVYAFGVILLELLTGRCA 983
G Y APE+ + + K SFK +D+YA G++ E + RC+
Sbjct: 194 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCS 242
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 22/170 (12%)
Query: 829 IRHPNVVGLRGY--YWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAV 886
+RH N++G T + ++SDY GSL +L +T +K+A+
Sbjct: 60 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT------VTVEGMIKLAL 113
Query: 887 DVARGLNYLHFD-------RAVPHGNLKATNILL--DGPDLNARVADYCLHRLMTQAGTI 937
A GL +LH + A+ H +LK+ NIL+ +G A + H T I
Sbjct: 114 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 173
Query: 938 EQILDAGVLGYRAPEL---AASKKPHPSFK-SDVYAFGVILLELLTGRCA 983
G Y APE+ + + K SFK +D+YA G++ E + RC+
Sbjct: 174 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCS 222
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 22/170 (12%)
Query: 829 IRHPNVVGLRGY--YWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAV 886
+RH N++G T + ++SDY GSL +L +T +K+A+
Sbjct: 57 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT------VTVEGMIKLAL 110
Query: 887 DVARGLNYLHFD-------RAVPHGNLKATNILL--DGPDLNARVADYCLHRLMTQAGTI 937
A GL +LH + A+ H +LK+ NIL+ +G A + H T I
Sbjct: 111 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 170
Query: 938 EQILDAGVLGYRAPEL---AASKKPHPSFK-SDVYAFGVILLELLTGRCA 983
G Y APE+ + + K SFK +D+YA G++ E + RC+
Sbjct: 171 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCS 219
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 22/170 (12%)
Query: 829 IRHPNVVGLRGY--YWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAV 886
+RH N++G T + ++SDY GSL +L +T +K+A+
Sbjct: 93 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT------VTVEGMIKLAL 146
Query: 887 DVARGLNYLHFD-------RAVPHGNLKATNILL--DGPDLNARVADYCLHRLMTQAGTI 937
A GL +LH + A+ H +LK+ NIL+ +G A + H T I
Sbjct: 147 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 206
Query: 938 EQILDAGVLGYRAPEL---AASKKPHPSFK-SDVYAFGVILLELLTGRCA 983
G Y APE+ + + K SFK +D+YA G++ E + RC+
Sbjct: 207 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCS 255
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 15/151 (9%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
+RHPN + RG Y +H ++ +Y GS + L PL + +
Sbjct: 110 KLRHPNTIQYRGCYL--REHTAWLVMEYCL-GSASDLL----EVHKKPLQEVEIAAVTHG 162
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+GL YLH + H ++KA NILL P L ++ D+ +M A G
Sbjct: 163 ALQGLAYLHSHNMI-HRDVKAGNILLSEPGL-VKLGDFGSASIMAPANXF-----VGTPY 215
Query: 948 YRAPE-LAASKKPHPSFKSDVYAFGVILLEL 977
+ APE + A + K DV++ G+ +EL
Sbjct: 216 WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 115/276 (41%), Gaps = 46/276 (16%)
Query: 85 ADLSVFSNLSMLVKLSMSNNSISGVIP--------------------DNIGDFKSLEFLD 124
D++ NL+ LV + M+NN I+ + P D + + +L L+
Sbjct: 80 TDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLE 139
Query: 125 VSDNLFSSSLPSGIGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPP 184
+S N S S + L SLQ LS GN + L P ++ L +++ LD+S N S
Sbjct: 140 LSSNTISD--ISALSGLTSLQQLSF-GNQVTDLKP--LANLTTLERLDISSNKVSD--IS 192
Query: 185 ALTRXXXXXXXXXXXXGFSKRIPRGFELILGLQVLDFHGNKLDGHLDGEFFLLTNASHID 244
L + S P G ++ L L +GN+L G LTN + +D
Sbjct: 193 VLAKLTNLESLIATNNQISDITPLG--ILTNLDELSLNGNQLKDI--GTLASLTNLTDLD 248
Query: 245 FSGNMFVGSSSQKFLPGLSQ----SVQYLNLS----LNQLTGSLVNGGELQ------LFE 290
+ N + L L++ + Q N+S L LT +N +L+ +
Sbjct: 249 LANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLK 308
Query: 291 NLKVLDLSYNQLTGELPGFNFVYELQVLKLSNNRFS 326
NL L L +N ++ P + + +LQ L +NN+ S
Sbjct: 309 NLTYLTLYFNNISDISP-VSSLTKLQRLFFANNKVS 343
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
Query: 477 STLQELHLADNLLTGVLDFSPPSVSNLQVLDLSHNRLNGYFPDRLGSLTGLKVLCLAGNN 536
+ L EL L N L + + S++NL LDL++N+++ P L LT L L L N
Sbjct: 220 TNLDELSLNGNQLKDIGTLA--SLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQ 275
Query: 537 ISGSLPTSMANMTSLSSLVISQNHFTGPLP-NNLPNSLETFNVSYNDFSGAVP 588
IS P +A +T+L++L +++N P +NL N L + +N+ S P
Sbjct: 276 ISNISP--LAGLTALTNLELNENQLEDISPISNLKN-LTYLTLYFNNISDISP 325
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 88/205 (42%), Gaps = 24/205 (11%)
Query: 784 LGRSSHGTSYRATLENGMF-LTVKWL------REGVAKQRXXXXXXXXXXXNIRHPNVVG 836
LG+ G Y A +N F L +K L + GV Q ++RHPN++
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQ---LRREVEIQSHLRHPNILR 72
Query: 837 LRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLH 896
L GY+ T+ ++ +Y G++ R +K + ++A L+Y H
Sbjct: 73 LYGYFHDSTR--VYLILEYAPLGTVY-----RELQKLSKFDEQRTATYITELANALSYCH 125
Query: 897 FDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAAS 956
+ V H ++K N+LL G ++AD+ A + + G L Y PE+
Sbjct: 126 -SKKVIHRDIKPENLLL-GSAGELKIADFG---WSVHAPSSRRAALCGTLDYLPPEMIEG 180
Query: 957 KKPHPSFKSDVYAFGVILLELLTGR 981
+ H K D+++ GV+ E L G+
Sbjct: 181 RM-HDE-KVDLWSLGVLCYEFLVGK 203
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 885 AVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAG 944
A ++A GL +L + + + +LK N++LD + + ++AD+ + + G + G
Sbjct: 448 AAEIAIGLFFLQ-SKGIIYRDLKLDNVMLDS-EGHIKIADFGMCKENIWDGVTTKXF-CG 504
Query: 945 VLGYRAPELAASKKPHPSFKS-DVYAFGVILLELLTGR 981
Y APE+ A + P KS D +AFGV+L E+L G+
Sbjct: 505 TPDYIAPEIIAYQ---PYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 831 HPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVAR 890
HP++V L G T++ I+ + + G L SFL R L A + A ++
Sbjct: 98 HPHIVKLIGVI---TENPVWIIMELCTLGELRSFLQVRKY----SLDLASLILYAYQLST 150
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRA 950
L YL R V H ++ A N+L+ D ++ D+ L R M + + + + A
Sbjct: 151 ALAYLESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 208
Query: 951 PELAASKKPHPSFKSDVYAFGVILLELL 978
PE ++ + SDV+ FGV + E+L
Sbjct: 209 PESINFRRFTSA--SDVWMFGVCMWEIL 234
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 13/207 (6%)
Query: 773 PEELSRAPAEVLGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHP 832
P EL+ + +G G + N + +K +REG A + HP
Sbjct: 7 PSELTFV--QEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHP 63
Query: 833 NVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGL 892
+V L G Q ++++++ G L+ +L + G L + +DV G+
Sbjct: 64 KLVQLYGVCL--EQAPICLVTEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVCEGM 117
Query: 893 NYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPE 952
YL + V H +L A N L+ G + +V+D+ + R + + + +PE
Sbjct: 118 AYLE-EACVIHRDLAARNCLV-GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 175
Query: 953 LAASKKPHPSFKSDVYAFGVILLELLT 979
+ + + S KSDV++FGV++ E+ +
Sbjct: 176 VFSFSRY--SSKSDVWSFGVLMWEVFS 200
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 831 HPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVAR 890
HP++V L G T++ I+ + + G L SFL R L A + A ++
Sbjct: 73 HPHIVKLIGVI---TENPVWIIMELCTLGELRSFLQVRKY----SLDLASLILYAYQLST 125
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRA 950
L YL R V H ++ A N+L+ D ++ D+ L R M + + + + A
Sbjct: 126 ALAYLESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 183
Query: 951 PELAASKKPHPSFKSDVYAFGVILLELL 978
PE ++ + SDV+ FGV + E+L
Sbjct: 184 PESINFRRFTSA--SDVWMFGVCMWEIL 209
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ LIL +Y G + L +K + +
Sbjct: 69 HLRHPNILRLYGYFHDATR-VYLIL-EYAPRGEVYKEL-----QKLSKFDEQRTATYITE 121
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+A L+Y H R + H ++K N+LL G ++AD+ A + + G L
Sbjct: 122 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIADFGWS---VHAPSSRRXXLXGTLD 176
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y PE+ + H K D+++ GV+ E L G+
Sbjct: 177 YLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVGK 208
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 831 HPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVAR 890
HP++V L G T++ I+ + + G L SFL R L A + A ++
Sbjct: 75 HPHIVKLIGVI---TENPVWIIMELCTLGELRSFLQVRKY----SLDLASLILYAYQLST 127
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRA 950
L YL R V H ++ A N+L+ D ++ D+ L R M + + + + A
Sbjct: 128 ALAYLESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 185
Query: 951 PELAASKKPHPSFKSDVYAFGVILLELL 978
PE ++ + SDV+ FGV + E+L
Sbjct: 186 PESINFRRFTSA--SDVWMFGVCMWEIL 211
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ ++ +Y G++ R +K + +
Sbjct: 69 HLRHPNILRLYGYFHDATR--VYLILEYAPLGTVY-----RELQKLSKFDEQRTATYITE 121
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+A L+Y H R + H ++K N+LL G ++AD+ A + + G L
Sbjct: 122 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIADFG---WSVHAPSSRRTDLCGTLD 176
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y PE+ + H K D+++ GV+ E L G+
Sbjct: 177 YLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVGK 208
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 41.6 bits (96), Expect = 0.003, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ LIL +Y G++ R +K + +
Sbjct: 64 HLRHPNILRLYGYFHDATR-VYLIL-EYAPLGTVY-----RELQKLSKFDEQRTATYITE 116
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+A L+Y H R + H ++K N+LL G ++AD+ A + + G L
Sbjct: 117 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIADFGWS---VHAPSSRRTDLCGTLD 171
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y PE+ + H K D+++ GV+ E L G+
Sbjct: 172 YLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVGK 203
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 108/266 (40%), Gaps = 40/266 (15%)
Query: 85 ADLSVFSNLSMLVKLSMSNNSISGVIP--------------------DNIGDFKSLEFLD 124
D++ NL+ LV + M+NN I+ + P D + + +L L+
Sbjct: 81 TDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLE 140
Query: 125 VSDNLFSSSLPSGIGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPP 184
+S N S S + L SLQ LS GN + L P ++ L +++ LD+S N S
Sbjct: 141 LSSNTISD--ISALSGLTSLQQLSF-GNQVTDLKP--LANLTTLERLDISSNKVSD--IS 193
Query: 185 ALTRXXXXXXXXXXXXGFSKRIPRGFELILGLQVLDFHGNKLDGHLDGEFFLLTNASHID 244
L + S P G ++ L L +GN+L G LTN + +D
Sbjct: 194 VLAKLTNLESLIATNNQISDITPLG--ILTNLDELSLNGNQLKDI--GTLASLTNLTDLD 249
Query: 245 FSGNMFVGSSSQKFLPGLSQSVQYLNLSLNQLTGSLVNGGELQLFENLKVLDLSYNQLTG 304
+ N S+ L GL++ + L L NQ++ N L L L+L+ NQL
Sbjct: 250 LANNQI---SNLAPLSGLTKLTE-LKLGANQIS----NISPLAGLTALTNLELNENQLED 301
Query: 305 ELPGFNFVYELQVLKLSNNRFSGFIP 330
P N L L L N S P
Sbjct: 302 ISPISNL-KNLTYLTLYFNNISDISP 326
Score = 36.6 bits (83), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 11/133 (8%)
Query: 477 STLQELHLADNLLTGVLDFSPPSVSNLQVLDLSHNRLNGYFPDRLGSLTGLKVLCLAGNN 536
+ L EL L N L + + S++NL LDL++N+++ P L LT L L L N
Sbjct: 221 TNLDELSLNGNQLKDIGTLA--SLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQ 276
Query: 537 ISGSLPTSMANMTSLSSLVISQNHFTGPLP-NNLPNSLETFNVSYNDFSGAVP-ENLRKF 594
IS P +A +T+L++L +++N P +NL N L + +N+ S P +L K
Sbjct: 277 ISNISP--LAGLTALTNLELNENQLEDISPISNLKN-LTYLTLYFNNISDISPVSSLTKL 333
Query: 595 PSSSFYPGNSKLS 607
FY N+K+S
Sbjct: 334 QRLFFY--NNKVS 344
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 41.6 bits (96), Expect = 0.003, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ LIL +Y G++ R +K + +
Sbjct: 64 HLRHPNILRLYGYFHDATR-VYLIL-EYAPLGTVY-----RELQKLSKFDEQRTATYITE 116
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+A L+Y H R + H ++K N+LL G ++AD+ A + + G L
Sbjct: 117 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIADFGWS---VHAPSSRRTDLCGTLD 171
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y PE+ + H K D+++ GV+ E L G+
Sbjct: 172 YLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVGK 203
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 41.6 bits (96), Expect = 0.003, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 19/191 (9%)
Query: 803 LTVKWLREGV--AKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGS 860
+ VK L+EG ++ R H NVV L G P +++ ++ G+
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG-PLMVIVEFCKFGN 109
Query: 861 LASFLYDR-----PGRKGPP------LTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKAT 909
L+++L + P + P LT + + VA+G+ +L R H +L A
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA-SRKCIHRDLAAR 168
Query: 910 NILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV-LGYRAPELAASKKPHPSFKSDVY 968
NILL ++ ++ D+ L R + + + DA + L + APE + + +SDV+
Sbjct: 169 NILLSEKNV-VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVY--TIQSDVW 225
Query: 969 AFGVILLELLT 979
+FGV+L E+ +
Sbjct: 226 SFGVLLWEIFS 236
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 41.6 bits (96), Expect = 0.003, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 19/191 (9%)
Query: 803 LTVKWLREGV--AKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGS 860
+ VK L+EG ++ R H NVV L G P +++ ++ G+
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG-PLMVIVEFCKFGN 118
Query: 861 LASFLYDR-----PGRKGPP------LTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKAT 909
L+++L + P + P LT + + VA+G+ +L R H +L A
Sbjct: 119 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA-SRKCIHRDLAAR 177
Query: 910 NILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV-LGYRAPELAASKKPHPSFKSDVY 968
NILL ++ ++ D+ L R + + + DA + L + APE + + +SDV+
Sbjct: 178 NILLSEKNV-VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVY--TIQSDVW 234
Query: 969 AFGVILLELLT 979
+FGV+L E+ +
Sbjct: 235 SFGVLLWEIFS 245
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ ++ +Y G++ R +K + +
Sbjct: 65 HLRHPNILRLYGYFHDATR--VYLILEYAPLGTVY-----RELQKLSKFDEQRTATYITE 117
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+A L+Y H R + H ++K N+LL G ++AD+ A + + G L
Sbjct: 118 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIADFG---WSVHAPSSRRTDLCGTLD 172
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y PE+ + H K D+++ GV+ E L G+
Sbjct: 173 YLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVGK 204
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 22/135 (16%)
Query: 53 DFDGCPSSWNGIVCNGGNVAGVVLDNLGLSAAADLSVFSNLSMLVKLSMSNNSISG---- 108
DFD ++G ++ VV D G + +FSN+++ N ++SG
Sbjct: 267 DFD-----YSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNI------KNFTVSGTRMV 315
Query: 109 --VIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNLSLAGNNFSGL--IPDSVSG 164
+ P I F L+F S+NL + ++ G L L+ L L N L I + +
Sbjct: 316 HMLCPSKISPFLHLDF---SNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQ 372
Query: 165 LVSIQSLDLSHNSFS 179
+ S+Q LD+S NS S
Sbjct: 373 MKSLQQLDISQNSVS 387
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 13/93 (13%)
Query: 96 LVKLSMSNNSISGVIPDNIGDFKSL----EFLDVSDNLFSSSLPSGIGKLESLQNLSLAG 151
L+ L+MS+N ++ I F+ L + LD+ N S +P + KLE+LQ L++A
Sbjct: 401 LLSLNMSSNILTDTI------FRCLPPRIKVLDLHSNKIKS-IPKQVVKLEALQELNVAS 453
Query: 152 NNFSGLIPDSV-SGLVSIQSLDLSHNSFSGSLP 183
N +PD + L S+Q + L N + S P
Sbjct: 454 NQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 485
Score = 33.9 bits (76), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 14/165 (8%)
Query: 91 SNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFS--SSLPSGIGKLESLQNLS 148
S +S + L SNN ++ + +N G LE L + N S + +++SLQ L
Sbjct: 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLD 380
Query: 149 LAGNNFS-GLIPDSVSGLVSIQSLDLSHNSFSGS----LPPALTRXXXXXXXXXXXXGFS 203
++ N+ S S S+ SL++S N + + LPP +
Sbjct: 381 ISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKI------- 433
Query: 204 KRIPRGFELILGLQVLDFHGNKLDGHLDGEFFLLTNASHIDFSGN 248
K IP+ + LQ L+ N+L DG F LT+ I N
Sbjct: 434 KSIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTN 478
Score = 30.0 bits (66), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 18/167 (10%)
Query: 453 QKLRVLDLSFNHLDGPFLTNLLNSSTLQELHLADNLLTGVLDFSPPSVSN-LQVLDLSHN 511
QK +L++S N++ + +++L+ S L+ L ++ N + LD S + L+ LDLSHN
Sbjct: 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRI-QYLDISVFKFNQELEYLDLSHN 79
Query: 512 RLNGYFPDRLGSLTGLKVLCLAGNNISGSLPTS--MANMTSLSSLVISQNHFTG----PL 565
+L LK L L+ N LP NM+ L L +S H P+
Sbjct: 80 KL---VKISCHPTVNLKHLDLSFNAFDA-LPICKEFGNMSQLKFLGLSTTHLEKSSVLPI 135
Query: 566 PN-NLPNSLETFNVSYNDFSGAVPENLRKFPSSSF---YPGNSKLSF 608
+ N+ L +Y + PE L+ F + S +P N + F
Sbjct: 136 AHLNISKVLLVLGETYGEKED--PEGLQDFNTESLHIVFPTNKEFHF 180
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 830 RHPNVVGLRG--YYWGPTQHEKLILSDYISPGSLASFLY-----DRPGRKGPPLTWAQRL 882
+H N+V L G + GP L++++Y G L +FL D G PL L
Sbjct: 100 QHENIVNLLGACTHGGPV----LVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLL 155
Query: 883 KIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHR-LMTQAGTIEQIL 941
+ VA+G+ +L + H ++ A N+LL + A++ D+ L R +M + I +
Sbjct: 156 HFSSQVAQGMAFLASKNCI-HRDVAARNVLLTNGHV-AKIGDFGLARDIMNDSNYIVKGN 213
Query: 942 DAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ + APE + + +SDV+++G++L E+ +
Sbjct: 214 ARLPVKWMAPE--SIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 115/276 (41%), Gaps = 46/276 (16%)
Query: 85 ADLSVFSNLSMLVKLSMSNNSISGVIP--------------------DNIGDFKSLEFLD 124
D++ NL+ LV + M+NN I+ + P D + + +L L+
Sbjct: 76 TDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLE 135
Query: 125 VSDNLFSSSLPSGIGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPP 184
+S N S S + L SLQ L+ GN + L P ++ L +++ LD+S N S
Sbjct: 136 LSSNTISD--ISALSGLTSLQQLNF-GNQVTDLKP--LANLTTLERLDISSNKVSD--IS 188
Query: 185 ALTRXXXXXXXXXXXXGFSKRIPRGFELILGLQVLDFHGNKLDGHLDGEFFLLTNASHID 244
L + S P G ++ L L +GN+L G LTN + +D
Sbjct: 189 VLAKLTNLESLIATNNQISDITPLG--ILTNLDELSLNGNQLKDI--GTLASLTNLTDLD 244
Query: 245 FSGNMFVGSSSQKFLPGLSQ----SVQYLNLS----LNQLTGSLVNGGELQ------LFE 290
+ N + L L++ + Q N+S L LT +N +L+ +
Sbjct: 245 LANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLK 304
Query: 291 NLKVLDLSYNQLTGELPGFNFVYELQVLKLSNNRFS 326
NL L L +N ++ P + + +LQ L SNN+ S
Sbjct: 305 NLTYLTLYFNNISDISP-VSSLTKLQRLFFSNNKVS 339
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 10/152 (6%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
N+ H +V L G Q I+++Y++ G L ++L + R Q L++ D
Sbjct: 60 NLSHEKLVQLYGVC--TKQRPIFIITEYMANGCLLNYLREMRHR----FQTQQLLEMCKD 113
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
V + YL + H +L A N L++ + +V+D+ L R + +
Sbjct: 114 VCEAMEYLE-SKQFLHRDLAARNCLVNDQGV-VKVSDFGLSRYVLDDEYTSSRGSKFPVR 171
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ PE+ K S KSD++AFGV++ E+ +
Sbjct: 172 WSPPEVLMYSKF--SSKSDIWAFGVLMWEIYS 201
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 18/156 (11%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ LIL +Y G++ R +K + +
Sbjct: 67 HLRHPNILRLYGYFHDATR-VYLIL-EYAPLGTVY-----RELQKLSKFDEQRTATYITE 119
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY--CLHRLMTQAGTIEQILDAGV 945
+A L+Y H R + H ++K N+LL G ++A++ +H ++ T+ G
Sbjct: 120 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIANFGWSVHAPSSRRTTL-----CGT 172
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
L Y PE+ + H K D+++ GV+ E L G+
Sbjct: 173 LDYLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVGK 206
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 15/151 (9%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
+RHPN + RG Y +H ++ +Y GS + L PL + +
Sbjct: 71 KLRHPNTIQYRGCYL--REHTAWLVMEYCL-GSASDLL----EVHKKPLQEVEIAAVTHG 123
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+GL YLH + H ++KA NILL P L ++ D+ +M A G
Sbjct: 124 ALQGLAYLHSHNMI-HRDVKAGNILLSEPGL-VKLGDFGSASIMAPANXF-----VGTPY 176
Query: 948 YRAPE-LAASKKPHPSFKSDVYAFGVILLEL 977
+ APE + A + K DV++ G+ +EL
Sbjct: 177 WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 16/157 (10%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEK---LILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKI 884
+++H NV+GL + T E+ + L ++ L + + K LT +
Sbjct: 106 HMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFL 159
Query: 885 AVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAG 944
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R E
Sbjct: 160 IYQILRGLKYIH-SADIIHRDLKPSNLAVNE-DCELKILDFGLARHTDD----EMTGYVA 213
Query: 945 VLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 214 TRWYRAPEIMLNWM-HYNMTVDIWSVGCIMAELLTGR 249
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 831 HPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVAR 890
HP++V L G T++ I+ + + G L SFL R L A + A ++
Sbjct: 450 HPHIVKLIGVI---TENPVWIIMELCTLGELRSFLQVRKF----SLDLASLILYAYQLST 502
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRA 950
L YL R V H ++ A N+L+ D ++ D+ L R M + + + + A
Sbjct: 503 ALAYLESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 560
Query: 951 PELAASKKPHPSFKSDVYAFGVILLELL 978
PE ++ + SDV+ FGV + E+L
Sbjct: 561 PESINFRRFTSA--SDVWMFGVCMWEIL 586
>pdb|4GLP|A Chain A, The Crystal Structure Of Soluble Human Cd14 Reveals A Bent
Solenoid With A Hydrophobic Amino-terminal Pocket
Length = 310
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 17/128 (13%)
Query: 112 DNIGDFKSLEFLDVSDN-------LFSSSLPSGIGKLESLQNLSLAGNNF---SGLIPDS 161
+ + F +L LD+SDN L ++ P K ++QNL+L +G+
Sbjct: 163 EQVRAFPALTSLDLSDNPGLGERGLMAALCPH---KFPAIQNLALRNTGMETPTGVCAAL 219
Query: 162 VSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXXXXXXGFS--KRIPRGFELILGLQVL 219
+ V SLDLSHNS ++ P+ R F+ +++P+G L L+VL
Sbjct: 220 AAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKG--LPAKLRVL 277
Query: 220 DFHGNKLD 227
D N+L+
Sbjct: 278 DLSSNRLN 285
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 903 HGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPS 962
H ++K NIL+ D A + D+ + T + G L Y APE + + H +
Sbjct: 157 HRDVKPENILVSADDF-AYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFS--ESHAT 213
Query: 963 FKSDVYAFGVILLELLTGR--CAGDVISGEGAGVD 995
+++D+YA +L E LTG GD +S GA ++
Sbjct: 214 YRADIYALTCVLYECLTGSPPYQGDQLSVXGAHIN 248
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 71/135 (52%), Gaps = 8/135 (5%)
Query: 850 LILSDYISPGSLASFLYD-RPGRKGPPL----TWAQRLKIAVDVARGLNYLHFDRAVPHG 904
L++ + ++ G L S+L RP + P+ + ++ +++A ++A G+ YL+ ++ V H
Sbjct: 89 LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV-HR 147
Query: 905 NLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFK 964
+L A N ++ D ++ D+ + R + + + G+L R + K +
Sbjct: 148 DLAARNCMV-AEDFTVKIGDFGMTRDIXETDXXRK-GGKGLLPVRWMSPESLKDGVFTTY 205
Query: 965 SDVYAFGVILLELLT 979
SDV++FGV+L E+ T
Sbjct: 206 SDVWSFGVVLWEIAT 220
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 71/135 (52%), Gaps = 8/135 (5%)
Query: 850 LILSDYISPGSLASFLYD-RPGRKGPPL----TWAQRLKIAVDVARGLNYLHFDRAVPHG 904
L++ + ++ G L S+L RP + P+ + ++ +++A ++A G+ YL+ ++ V H
Sbjct: 98 LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV-HR 156
Query: 905 NLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFK 964
+L A N ++ D ++ D+ + R + + + G+L R + K +
Sbjct: 157 DLAARNCMV-AEDFTVKIGDFGMTRDIXETDXXRK-GGKGLLPVRWMSPESLKDGVFTTY 214
Query: 965 SDVYAFGVILLELLT 979
SDV++FGV+L E+ T
Sbjct: 215 SDVWSFGVVLWEIAT 229
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 849 KLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLNYLHFDRAVPHGNL 906
+ IL + ++ G L SFL + R P L L +A D+A G YL + + H ++
Sbjct: 109 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDI 167
Query: 907 KATNILLD--GPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFK 964
A N LL GP A++ D+ + + + +A + A + P A + S K
Sbjct: 168 AARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS-K 226
Query: 965 SDVYAFGVILLELLT 979
+D ++FGV+L E+ +
Sbjct: 227 TDTWSFGVLLWEIFS 241
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 19/191 (9%)
Query: 803 LTVKWLREGV--AKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGS 860
+ VK L+EG ++ R H NVV L G P +++ ++ G+
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG-PLMVIVEFCKFGN 118
Query: 861 LASFLYDR-----PGRKGPP------LTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKAT 909
L+++L + P + P LT + + VA+G+ +L R H +L A
Sbjct: 119 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA-SRKCIHRDLAAR 177
Query: 910 NILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV-LGYRAPELAASKKPHPSFKSDVY 968
NILL ++ ++ D+ L R + + + DA + L + APE + + +SDV+
Sbjct: 178 NILLSEKNV-VKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVY--TIQSDVW 234
Query: 969 AFGVILLELLT 979
+FGV+L E+ +
Sbjct: 235 SFGVLLWEIFS 245
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 41.2 bits (95), Expect = 0.004, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 19/191 (9%)
Query: 803 LTVKWLREGV--AKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGS 860
+ VK L+EG ++ R H NVV L G P +++ ++ G+
Sbjct: 97 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG-PLMVIVEFCKFGN 155
Query: 861 LASFLYDR-----PGRKGPP------LTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKAT 909
L+++L + P + P LT + + VA+G+ +L R H +L A
Sbjct: 156 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA-SRKCIHRDLAAR 214
Query: 910 NILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV-LGYRAPELAASKKPHPSFKSDVY 968
NILL ++ ++ D+ L R + + + DA + L + APE + + +SDV+
Sbjct: 215 NILLSEKNV-VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY--TIQSDVW 271
Query: 969 AFGVILLELLT 979
+FGV+L E+ +
Sbjct: 272 SFGVLLWEIFS 282
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 41.2 bits (95), Expect = 0.004, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 19/191 (9%)
Query: 803 LTVKWLREGV--AKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGS 860
+ VK L+EG ++ R H NVV L G P +++ ++ G+
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG-PLMVIVEFCKFGN 118
Query: 861 LASFLYDR-----PGRKGPP------LTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKAT 909
L+++L + P + P LT + + VA+G+ +L R H +L A
Sbjct: 119 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA-SRKCIHRDLAAR 177
Query: 910 NILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV-LGYRAPELAASKKPHPSFKSDVY 968
NILL ++ ++ D+ L R + + + DA + L + APE + + +SDV+
Sbjct: 178 NILLSEKNV-VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY--TIQSDVW 234
Query: 969 AFGVILLELLT 979
+FGV+L E+ +
Sbjct: 235 SFGVLLWEIFS 245
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ DY L R T
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDYGLARHTDDEMTGY----VATRW 187
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 188 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ ++ +Y G++ R +K + +
Sbjct: 66 HLRHPNILRLYGYFHDATR--VYLILEYAPLGTVY-----RELQKLSKFDEQRTATYITE 118
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY--CLHRLMTQAGTIEQILDAGV 945
+A L+Y H R + H ++K N+LL G ++A++ +H ++ T+ G
Sbjct: 119 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIANFGWSVHAPSSRRTTL-----CGT 171
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
L Y PE+ + H K D+++ GV+ E L G+
Sbjct: 172 LDYLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVGK 205
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 830 RHPNVVGLRG--YYWGPTQHEKLILSDYISPGSLASFLY-----DRPGRKGPPLTWAQRL 882
+H N+V L G + GP L++++Y G L +FL D G PL L
Sbjct: 108 QHENIVNLLGACTHGGPV----LVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLL 163
Query: 883 KIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHR-LMTQAGTIEQIL 941
+ VA+G+ +L + H ++ A N+LL + A++ D+ L R +M + I +
Sbjct: 164 HFSSQVAQGMAFLASKNCI-HRDVAARNVLLTNGHV-AKIGDFGLARDIMNDSNYIVKGN 221
Query: 942 DAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ + APE + + +SDV+++G++L E+ +
Sbjct: 222 ARLPVKWMAPE--SIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 18/156 (11%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ ++ +Y G++ R +K + +
Sbjct: 90 HLRHPNILRLYGYFHDATR--VYLILEYAPLGTVY-----RELQKLSKFDEQRTATYITE 142
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY--CLHRLMTQAGTIEQILDAGV 945
+A L+Y H R + H ++K N+LL G ++AD+ +H ++ + G
Sbjct: 143 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRDDL-----CGT 195
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
L Y PE+ + H K D+++ GV+ E L G+
Sbjct: 196 LDYLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVGK 229
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 20/210 (9%)
Query: 782 EVLGRSSHGTSYRATLENGMFLTVKWLREGV--AKQRXXXXXXXXXXXNIRHPNVVGLRG 839
+V+ + G AT + VK L+EG ++ R H NVV L G
Sbjct: 44 QVIEADAFGIDKTATXRT---VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 100
Query: 840 YYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP---------LTWAQRLKIAVDVAR 890
P +++ ++ G+L+++L + P LT + + VA+
Sbjct: 101 ACTKPGG-PLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAK 159
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV-LGYR 949
G+ +L R H +L A NILL ++ ++ D+ L R + + + DA + L +
Sbjct: 160 GMEFLA-SRKXIHRDLAARNILLSEKNV-VKICDFGLARDIXKDPDXVRKGDARLPLKWM 217
Query: 950 APELAASKKPHPSFKSDVYAFGVILLELLT 979
APE + + +SDV++FGV+L E+ +
Sbjct: 218 APETIFDRVY--TIQSDVWSFGVLLWEIFS 245
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 40.8 bits (94), Expect = 0.004, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 20/206 (9%)
Query: 782 EVLGRSSHGTSYRAT-LENG----MFLTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVV 835
+VLG + GT Y+ + G + + +K LRE + K ++ +P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLN 893
L G T + L + G L ++ + G L W V +A+G+N
Sbjct: 83 RLLGICLTSTVQLIMQLMPF---GCLLDYVREHKDNIGSQYLLNWC------VQIAKGMN 133
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
YL DR + H +L A N+L+ P + ++ D+ +L+ A E + G + + L
Sbjct: 134 YLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLG-AEEKEYHAEGGKVPIKWMAL 190
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
+ + +SDV+++GV + EL+T
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 40.8 bits (94), Expect = 0.004, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 20/206 (9%)
Query: 782 EVLGRSSHGTSYRAT-LENG----MFLTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVV 835
+VLG + GT Y+ + G + + +K LRE + K ++ +P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLN 893
L G T + L + G L ++ + G L W V +A+G+N
Sbjct: 83 RLLGICLTSTVQLIMQLMPF---GCLLDYVREHKDNIGSQYLLNWC------VQIAKGMN 133
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
YL DR + H +L A N+L+ P + ++ D+ +L+ A E + G + + L
Sbjct: 134 YLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLG-AEEKEYHAEGGKVPIKWMAL 190
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
+ + +SDV+++GV + EL+T
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 40.8 bits (94), Expect = 0.004, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 20/206 (9%)
Query: 782 EVLGRSSHGTSYRAT-LENG----MFLTVKWLREGVA-KQRXXXXXXXXXXXNIRHPNVV 835
+VLG + GT Y+ + G + + +K LRE + K ++ +P+V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP--LTWAQRLKIAVDVARGLN 893
L G T + L + G L ++ + G L W V +A+G+N
Sbjct: 85 RLLGICLTSTVQLIMQLMPF---GCLLDYVREHKDNIGSQYLLNWC------VQIAKGMN 135
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
YL DR + H +L A N+L+ P + ++ D+ +L+ A E + G + + L
Sbjct: 136 YLE-DRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLG-AEEKEYHAEGGKVPIKWMAL 192
Query: 954 AASKKPHPSFKSDVYAFGVILLELLT 979
+ + +SDV+++GV + EL+T
Sbjct: 193 ESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 40.8 bits (94), Expect = 0.004, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 12/102 (11%)
Query: 883 KIAVDVARGLNYLHFDRAVPHGNLKATNILLDGP--DLNARVADYCLHRLMTQAGTIEQI 940
+I V G+ Y+H ++ V H +LK N+LL+ D N R+ D+ L + ++
Sbjct: 136 RIIRQVLSGITYMHKNKIV-HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 194
Query: 941 LDAGVLGYRAPELAASKKPHPSF--KSDVYAFGVILLELLTG 980
+ G Y APE+ H ++ K DV++ GVIL LL+G
Sbjct: 195 I--GTAYYIAPEVL-----HGTYDEKCDVWSTGVILYILLSG 229
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 779 APAEVLGRSSHGTSYRATLENGMFLTVKWLREGV--AKQRXXXXXXXXXXXNIRHPNVVG 836
A +V+ + G AT + VK L+EG ++ R H NVV
Sbjct: 39 AFGQVIEADAFGIDKTATXRT---VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95
Query: 837 LRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP-------LTWAQRLKIAVDVA 889
L G P +++ ++ G+L+++L + P LT + + VA
Sbjct: 96 LLGACTKPGG-PLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 890 RGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV-LGY 948
+G+ +L R H +L A NILL ++ ++ D+ L R + + + DA + L +
Sbjct: 155 KGMEFLA-SRKXIHRDLAARNILLSEKNV-VKIXDFGLARDIYKDPDYVRKGDARLPLKW 212
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT 979
APE + + +SDV++FGV+L E+ +
Sbjct: 213 MAPETIFDRVY--TIQSDVWSFGVLLWEIFS 241
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 40.8 bits (94), Expect = 0.004, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 13/207 (6%)
Query: 773 PEELSRAPAEVLGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHP 832
P EL+ + +G G + N + +K +REG A + HP
Sbjct: 6 PSELTFV--QEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHP 62
Query: 833 NVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGL 892
+V L G Q ++ +++ G L+ +L + G L + +DV G+
Sbjct: 63 KLVQLYGVCL--EQAPICLVFEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVCEGM 116
Query: 893 NYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPE 952
YL + +V H +L A N L+ G + +V+D+ + R + + + +PE
Sbjct: 117 AYLE-EASVIHRDLAARNCLV-GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 174
Query: 953 LAASKKPHPSFKSDVYAFGVILLELLT 979
+ + + S KSDV++FGV++ E+ +
Sbjct: 175 VFSFSRY--SSKSDVWSFGVLMWEVFS 199
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 40.8 bits (94), Expect = 0.004, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 70/135 (51%), Gaps = 8/135 (5%)
Query: 850 LILSDYISPGSLASFLYD-RPGRKGPPL----TWAQRLKIAVDVARGLNYLHFDRAVPHG 904
L++ + ++ G L S+L RP P+ + ++ +++A ++A G+ YL+ ++ V H
Sbjct: 94 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV-HR 152
Query: 905 NLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFK 964
+L A N ++ D ++ D+ + R + + + G+L R + K +
Sbjct: 153 DLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRK-GGKGLLPVRWMSPESLKDGVFTTY 210
Query: 965 SDVYAFGVILLELLT 979
SDV++FGV+L E+ T
Sbjct: 211 SDVWSFGVVLWEIAT 225
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 6/161 (3%)
Query: 79 LGLSAAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGD-FKSLEFLDVSDNLFSSSLPSG 137
LG + D+S L+ L L ++ N + +P+ + D +L+ L + +N S LP G
Sbjct: 70 LGGNKLHDISALKELTNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVENQLQS-LPDG 127
Query: 138 I-GKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXX 196
+ KL +L L+LA N L L ++ LDLS+N SLP +
Sbjct: 128 VFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFDKLTQLKDL 186
Query: 197 XXXXGFSKRIPRG-FELILGLQVLDFHGNKLDGHLDGEFFL 236
K +P G F+ + LQ + H N D G +L
Sbjct: 187 RLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRYL 227
Score = 33.1 bits (74), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 477 STLQELHLADNLLTGVLDFSPPSVSNLQVLDLSHNRLNGYFPDRLGSLTGLKVLCLAGNN 536
+ L+EL L +N L + D ++NL L+L+HN+L LT L L L+ N
Sbjct: 109 TNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQ 168
Query: 537 ISGSLPTSMAN-MTSLSSLVISQNHF 561
+ SLP + + +T L L + QN
Sbjct: 169 LQ-SLPEGVFDKLTQLKDLRLYQNQL 193
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 85/212 (40%), Gaps = 24/212 (11%)
Query: 104 NSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNLSLAGNNFSGLIPDSVS 163
NSI +I +N D KS++ GI L +++ L+L GN + ++
Sbjct: 41 NSIDQIIANN-SDIKSVQ---------------GIQYLPNVRYLALGGNKLHDI--SALK 82
Query: 164 GLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXXXXXXGFSKRIPRG-FELILGLQVLDFH 222
L ++ L L+ N SLP + + +P G F+ + L L+
Sbjct: 83 ELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLA 141
Query: 223 GNKLDGHLDGEFFLLTNASHIDFSGNMFVGSSSQKFLPGLSQSVQYLNLSLNQLTGSLVN 282
N+L G F LTN + +D S N S + L+Q ++ L L NQL V
Sbjct: 142 HNQLQSLPKGVFDKLTNLTELDLSYNQL-QSLPEGVFDKLTQ-LKDLRLYQNQLKS--VP 197
Query: 283 GGELQLFENLKVLDLSYNQLTGELPGFNFVYE 314
G +L+ + L N PG ++ E
Sbjct: 198 DGVFDRLTSLQYIWLHDNPWDCTCPGIRYLSE 229
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 71/143 (49%), Gaps = 12/143 (8%)
Query: 840 YYWGPTQHEKL-ILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFD 898
YY + KL I+ +Y+ GS L R G P Q + ++ +GL+YLH +
Sbjct: 86 YYGSYLKGSKLWIIMEYLGGGSALDLL--RAG----PFDEFQIATMLKEILKGLDYLHSE 139
Query: 899 RAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKK 958
+ + H ++KA N+LL + ++AD+ + +T I++ G + APE+ ++
Sbjct: 140 KKI-HRDIKAANVLLSEQG-DVKLADFGVAGQLTDT-QIKRNTFVGTPFWMAPEVI--QQ 194
Query: 959 PHPSFKSDVYAFGVILLELLTGR 981
K+D+++ G+ +EL G
Sbjct: 195 SAYDSKADIWSLGITAIELAKGE 217
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 70/135 (51%), Gaps = 8/135 (5%)
Query: 850 LILSDYISPGSLASFLYD-RPGRKGPPL----TWAQRLKIAVDVARGLNYLHFDRAVPHG 904
L++ + ++ G L S+L RP P+ + ++ +++A ++A G+ YL+ ++ V H
Sbjct: 104 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV-HR 162
Query: 905 NLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFK 964
+L A N ++ D ++ D+ + R + + + G+L R + K +
Sbjct: 163 DLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRK-GGKGLLPVRWMSPESLKDGVFTTY 220
Query: 965 SDVYAFGVILLELLT 979
SDV++FGV+L E+ T
Sbjct: 221 SDVWSFGVVLWEIAT 235
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 71/135 (52%), Gaps = 8/135 (5%)
Query: 850 LILSDYISPGSLASFLYD-RPGRKGPPL----TWAQRLKIAVDVARGLNYLHFDRAVPHG 904
L++ + ++ G L S+L RP + P+ + ++ +++A ++A G+ YL+ ++ V H
Sbjct: 97 LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV-HR 155
Query: 905 NLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFK 964
+L A N ++ D ++ D+ + R + + + G+L R + K +
Sbjct: 156 DLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRK-GGKGLLPVRWMSPESLKDGVFTTY 213
Query: 965 SDVYAFGVILLELLT 979
SDV++FGV+L E+ T
Sbjct: 214 SDVWSFGVVLWEIAT 228
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 883 KIAVDVARGLNYLHFDRAVPHGNLKATNILLDGP--DLNARVADYCLHRLMTQAGTIEQI 940
+I V G+ Y+H + H +LK NILL+ D + ++ D+ L Q ++
Sbjct: 125 RIIKQVFSGITYMH-KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR 183
Query: 941 LDAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
+ G Y APE+ K DV++ GVIL LL+G
Sbjct: 184 I--GTAYYIAPEVLRGTYDE---KCDVWSAGVILYILLSG 218
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.4 bits (93), Expect = 0.006, Method: Composition-based stats.
Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 15/187 (8%)
Query: 803 LTVKWLREGV--AKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGS 860
+ VK L+EG ++ R H NVV L G P +++ ++ G+
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG-PLMVIVEFCKFGN 118
Query: 861 LASFLYDRPGRKGPP-------LTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILL 913
L+++L + P LT + + VA+G+ +L R H +L A NILL
Sbjct: 119 LSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLA-SRKXIHRDLAARNILL 177
Query: 914 DGPDLNARVADYCLHRLMTQAGTIEQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGV 972
++ ++ D+ L R + + + DA + L + APE + + +SDV++FGV
Sbjct: 178 SEKNV-VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY--TIQSDVWSFGV 234
Query: 973 ILLELLT 979
+L E+ +
Sbjct: 235 LLWEIFS 241
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 18/156 (11%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++RHPN++ L GY+ T+ ++ +Y G++ R +K + +
Sbjct: 67 HLRHPNILRLYGYFHDATR--VYLILEYAPLGTVY-----RELQKLSKFDEQRTATYITE 119
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY--CLHRLMTQAGTIEQILDAGV 945
+A L+Y H R + H ++K N+LL G ++AD+ +H ++ + G
Sbjct: 120 LANALSYCHSKRVI-HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRDDL-----CGT 172
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
L Y PE+ + H K D+++ GV+ E L G+
Sbjct: 173 LDYLPPEMIEGRM-HDE-KVDLWSLGVLCYEFLVGK 206
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 40.4 bits (93), Expect = 0.006, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 71/135 (52%), Gaps = 8/135 (5%)
Query: 850 LILSDYISPGSLASFLYD-RPGRKGPPL----TWAQRLKIAVDVARGLNYLHFDRAVPHG 904
L++ + ++ G L S+L RP + P+ + ++ +++A ++A G+ YL+ ++ V H
Sbjct: 95 LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV-HR 153
Query: 905 NLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFK 964
+L A N ++ D ++ D+ + R + + + G+L R + K +
Sbjct: 154 DLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRK-GGKGLLPVRWMSPESLKDGVFTTY 211
Query: 965 SDVYAFGVILLELLT 979
SDV++FGV+L E+ T
Sbjct: 212 SDVWSFGVVLWEIAT 226
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 40.4 bits (93), Expect = 0.006, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 71/135 (52%), Gaps = 8/135 (5%)
Query: 850 LILSDYISPGSLASFLYD-RPGRKGPPL----TWAQRLKIAVDVARGLNYLHFDRAVPHG 904
L++ + ++ G L S+L RP + P+ + ++ +++A ++A G+ YL+ ++ V H
Sbjct: 98 LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV-HR 156
Query: 905 NLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFK 964
+L A N ++ D ++ D+ + R + + + G+L R + K +
Sbjct: 157 DLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRK-GGKGLLPVRWMSPESLKDGVFTTY 214
Query: 965 SDVYAFGVILLELLT 979
SDV++FGV+L E+ T
Sbjct: 215 SDVWSFGVVLWEIAT 229
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 71/135 (52%), Gaps = 8/135 (5%)
Query: 850 LILSDYISPGSLASFLYD-RPGRKGPPL----TWAQRLKIAVDVARGLNYLHFDRAVPHG 904
L++ + ++ G L S+L RP + P+ + ++ +++A ++A G+ YL+ ++ V H
Sbjct: 97 LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV-HR 155
Query: 905 NLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFK 964
+L A N ++ D ++ D+ + R + + + G+L R + K +
Sbjct: 156 DLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRK-GGKGLLPVRWMSPESLKDGVFTTY 213
Query: 965 SDVYAFGVILLELLT 979
SDV++FGV+L E+ T
Sbjct: 214 SDVWSFGVVLWEIAT 228
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 71/135 (52%), Gaps = 8/135 (5%)
Query: 850 LILSDYISPGSLASFLYD-RPGRKGPPL----TWAQRLKIAVDVARGLNYLHFDRAVPHG 904
L++ + ++ G L S+L RP + P+ + ++ +++A ++A G+ YL+ ++ V H
Sbjct: 91 LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV-HR 149
Query: 905 NLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFK 964
+L A N ++ D ++ D+ + R + + + G+L R + K +
Sbjct: 150 DLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRK-GGKGLLPVRWMSPESLKDGVFTTY 207
Query: 965 SDVYAFGVILLELLT 979
SDV++FGV+L E+ T
Sbjct: 208 SDVWSFGVVLWEIAT 222
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 71/135 (52%), Gaps = 8/135 (5%)
Query: 850 LILSDYISPGSLASFLYD-RPGRKGPPL----TWAQRLKIAVDVARGLNYLHFDRAVPHG 904
L++ + ++ G L S+L RP + P+ + ++ +++A ++A G+ YL+ ++ V H
Sbjct: 126 LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV-HR 184
Query: 905 NLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFK 964
+L A N ++ D ++ D+ + R + + + G+L R + K +
Sbjct: 185 DLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRK-GGKGLLPVRWMSPESLKDGVFTTY 242
Query: 965 SDVYAFGVILLELLT 979
SDV++FGV+L E+ T
Sbjct: 243 SDVWSFGVVLWEIAT 257
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 884 IAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNA--RVADYCLHRLMTQAGTIEQIL 941
I V G YLH + H +LK N+LL+ +A ++ D+ L G +++ L
Sbjct: 109 IMKQVLSGTTYLH-KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL 167
Query: 942 DAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
G Y APE+ K K DV++ GVIL LL G
Sbjct: 168 --GTAYYIAPEVLRKKYDE---KCDVWSCGVILYILLCG 201
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY--CLHRLMTQAGTIEQILDAGV 945
+ RGL Y+H + H +LK +N+ ++ D ++ D+ C H G +
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDSELKILDFGLCRHTDDEMTGYV------AT 185
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 186 RWYRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 71/135 (52%), Gaps = 8/135 (5%)
Query: 850 LILSDYISPGSLASFLYD-RPGRKGPPL----TWAQRLKIAVDVARGLNYLHFDRAVPHG 904
L++ + ++ G L S+L RP + P+ + ++ +++A ++A G+ YL+ ++ V H
Sbjct: 104 LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV-HR 162
Query: 905 NLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFK 964
+L A N ++ D ++ D+ + R + + + G+L R + K +
Sbjct: 163 DLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRK-GGKGLLPVRWMSPESLKDGVFTTY 220
Query: 965 SDVYAFGVILLELLT 979
SDV++FGV+L E+ T
Sbjct: 221 SDVWSFGVVLWEIAT 235
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 18/190 (9%)
Query: 803 LTVKWLREGV--AKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGS 860
+ VK L+EG ++ R H NVV L G P +++ ++ G+
Sbjct: 61 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG-PLMVIVEFCKFGN 119
Query: 861 LASFLYDRPGR----KGPP------LTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATN 910
L+++L + K P LT + + VA+G+ +L R H +L A N
Sbjct: 120 LSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLA-SRKCIHRDLAARN 178
Query: 911 ILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV-LGYRAPELAASKKPHPSFKSDVYA 969
ILL ++ ++ D+ L R + + + DA + L + APE + + +SDV++
Sbjct: 179 ILLSEKNV-VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVY--TIQSDVWS 235
Query: 970 FGVILLELLT 979
FGV+L E+ +
Sbjct: 236 FGVLLWEIFS 245
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 13/207 (6%)
Query: 773 PEELSRAPAEVLGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHP 832
P EL+ + +G G + N + +K +REG A + HP
Sbjct: 4 PSELTFV--QEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHP 60
Query: 833 NVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGL 892
+V L G Q ++ +++ G L+ +L + G L + +DV G+
Sbjct: 61 KLVQLYGVCL--EQAPICLVFEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVCEGM 114
Query: 893 NYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPE 952
YL + V H +L A N L+ G + +V+D+ + R + + + +PE
Sbjct: 115 AYLE-EACVIHRDLAARNCLV-GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 172
Query: 953 LAASKKPHPSFKSDVYAFGVILLELLT 979
+ + + S KSDV++FGV++ E+ +
Sbjct: 173 VFSFSRY--SSKSDVWSFGVLMWEVFS 197
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 13/207 (6%)
Query: 773 PEELSRAPAEVLGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHP 832
P EL+ + +G G + N + +K +REG A + HP
Sbjct: 9 PSELTFV--QEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHP 65
Query: 833 NVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGL 892
+V L G Q ++ +++ G L+ +L + G L + +DV G+
Sbjct: 66 KLVQLYGVCL--EQAPICLVFEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVCEGM 119
Query: 893 NYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPE 952
YL + V H +L A N L+ G + +V+D+ + R + + + +PE
Sbjct: 120 AYLE-EACVIHRDLAARNCLV-GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 177
Query: 953 LAASKKPHPSFKSDVYAFGVILLELLT 979
+ + + S KSDV++FGV++ E+ +
Sbjct: 178 VFSFSRY--SSKSDVWSFGVLMWEVFS 202
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 13/207 (6%)
Query: 773 PEELSRAPAEVLGRSSHGTSYRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHP 832
P EL+ + +G G + N + +K +REG A + HP
Sbjct: 6 PSELTFV--QEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHP 62
Query: 833 NVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGL 892
+V L G Q ++ +++ G L+ +L + G L + +DV G+
Sbjct: 63 KLVQLYGVCL--EQAPICLVFEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVCEGM 116
Query: 893 NYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPE 952
YL + V H +L A N L+ G + +V+D+ + R + + + +PE
Sbjct: 117 AYLE-EACVIHRDLAARNCLV-GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 174
Query: 953 LAASKKPHPSFKSDVYAFGVILLELLT 979
+ + + S KSDV++FGV++ E+ +
Sbjct: 175 VFSFSRY--SSKSDVWSFGVLMWEVFS 199
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 108/266 (40%), Gaps = 40/266 (15%)
Query: 85 ADLSVFSNLSMLVKLSMSNNSISGVIP--------------------DNIGDFKSLEFLD 124
D++ NL+ LV + M+NN I+ + P D + + +L L+
Sbjct: 76 TDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLE 135
Query: 125 VSDNLFSSSLPSGIGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPP 184
+S N S S + L SLQ L+ GN + L P ++ L +++ LD+S N S
Sbjct: 136 LSSNTISD--ISALSGLTSLQQLNF-GNQVTDLKP--LANLTTLERLDISSNKVSD--IS 188
Query: 185 ALTRXXXXXXXXXXXXGFSKRIPRGFELILGLQVLDFHGNKLDGHLDGEFFLLTNASHID 244
L + S P G ++ L L +GN+L G LTN + +D
Sbjct: 189 VLAKLTNLESLIATNNQISDITPLG--ILTNLDELSLNGNQLKDI--GTLASLTNLTDLD 244
Query: 245 FSGNMFVGSSSQKFLPGLSQSVQYLNLSLNQLTGSLVNGGELQLFENLKVLDLSYNQLTG 304
+ N S+ L GL++ + L L NQ++ N L L L+L+ NQL
Sbjct: 245 LANNQI---SNLAPLSGLTKLTE-LKLGANQIS----NISPLAGLTALTNLELNENQLED 296
Query: 305 ELPGFNFVYELQVLKLSNNRFSGFIP 330
P N L L L N S P
Sbjct: 297 ISPISNL-KNLTYLTLYFNNISDISP 321
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 831 HPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVAR 890
HP++V L G T++ I+ + + G L SFL R L A + A ++
Sbjct: 70 HPHIVKLIGVI---TENPVWIIMELCTLGELRSFLQVRKFS----LDLASLILYAYQLST 122
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRA 950
L YL R V H ++ A N+L+ D ++ D+ L R M + + + + A
Sbjct: 123 ALAYLESKRFV-HRDIAARNVLVSATDC-VKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 180
Query: 951 PELAASKKPHPSFKSDVYAFGVILLELL 978
PE ++ + SDV+ FGV + E+L
Sbjct: 181 PESINFRRFTSA--SDVWMFGVCMWEIL 206
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R E
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDD----EMTGXVATRW 187
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 188 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVNE-DCELKILDFYLARHTDDEMTGY----VATRW 187
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 188 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 40.0 bits (92), Expect = 0.008, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 851 ILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATN 910
++ +YI +L+ ++ PL+ + + G+ + H D + H ++K N
Sbjct: 88 LVMEYIEGPTLSEYI-----ESHGPLSVDTAINFTNQILDGIKHAH-DMRIVHRDIKPQN 141
Query: 911 ILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFKSDVYAF 970
IL+D + ++ D+ + + +++ + G + Y +PE A + +D+Y+
Sbjct: 142 ILIDS-NKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDEC--TDIYSI 198
Query: 971 GVILLELLTG 980
G++L E+L G
Sbjct: 199 GIVLYEMLVG 208
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R E
Sbjct: 154 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDD----EMXGXVATRW 207
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 208 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 240
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R E
Sbjct: 141 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTAD----EMTGYVATRW 194
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 195 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 227
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLM--TQAGTIEQILDAGV 945
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R AG +
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMAGFV------AT 185
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 186 RWYRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 220
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGY----VATRW 187
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 188 YRAPEIMLNAM-HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3A79|A Chain A, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
pdb|3A7B|A Chain A, Crystal Structure Of Tlr2-Streptococcus Pneumoniae
Lipoteichoic Acid Complex
pdb|3A7C|A Chain A, Crystal Structure Of Tlr2-Pe-Dtpa Complex
Length = 580
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 86 DLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQ 145
DL +NL +L+ S N+I G D SLE LD+SDN SS S G L SL+
Sbjct: 71 DLRACANLQVLILKSSRINTIEG---DAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLK 127
Query: 146 NLSLAGNNFSGL-IPDSVSGLVSIQSLDL 173
L+L GN + L + L ++Q+L +
Sbjct: 128 YLNLMGNPYQTLGVTSLFPNLTNLQTLRI 156
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 19/145 (13%)
Query: 52 IDFDGC---------PSSWNGIVCNGGNVAGVVLDNLGLSAAA---DLS-VFSNLSMLVK 98
++FD C PS + +V G V V + L + DLS V+S L + +
Sbjct: 282 VEFDDCTLNGLGDFNPSE-SDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKR 340
Query: 99 LSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSL---PSGIGKLESLQNLSLAGNNFS 155
+++ N+ + V KSLEFLD+S+NL + G SLQ L L+ N+
Sbjct: 341 ITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLR 400
Query: 156 GLIP--DSVSGLVSIQSLDLSHNSF 178
+ + + L ++ SLD+S N+F
Sbjct: 401 SMQKTGEILLTLKNLTSLDISRNTF 425
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 455 LRVLDLSFNHLDGPFLTNLLNSSTLQELHLADNLLTGVLDFSPPSVSNLQVLDLSHNRLN 514
++ LDLSFN + +L + LQ L L + + + + S+ +L+ LDLS N L+
Sbjct: 54 MKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLS 113
Query: 515 GYFPDRLGSLTGLKVLCLAGNNISGSLPTSM-ANMTSLSSLVI 556
G L+ LK L L GN TS+ N+T+L +L I
Sbjct: 114 SLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRI 156
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R E
Sbjct: 141 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTAD----EMTGYVATRW 194
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 195 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 227
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLM--TQAGTIEQILDAGV 945
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R AG +
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMAGFV------AT 185
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 186 RWYRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 141 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTADEMTGY----VATRW 194
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 195 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 227
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 23/116 (19%)
Query: 885 AVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNA------RVADYCLHRLMTQAGTIE 938
+++ + LNYL ++ H +LK NILLD P RV D ++ T
Sbjct: 143 CIEILKALNYLR-KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGI 201
Query: 939 QILDAGVLG--------------YRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
+++D G YRAPE+ + S SD+++FG +L EL TG
Sbjct: 202 KLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVS--SDMWSFGCVLAELYTG 255
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R E
Sbjct: 146 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDD----EMTGYVATRW 199
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 200 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 232
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 31/160 (19%)
Query: 831 HPNVVGL------RGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKI 884
HPN+ L +GY++ ++ + + G L + R + +I
Sbjct: 85 HPNIXKLYEFFEDKGYFY--------LVGEVYTGGELFDEIISRK-----RFSEVDAARI 131
Query: 885 AVDVARGLNYLHFDRAVPHGNLKATNILLDGP--DLNARVADYCLHRLMTQAGTIEQILD 942
V G+ Y H ++ V H +LK N+LL+ D N R+ D+ L + + +
Sbjct: 132 IRQVLSGITYXHKNKIV-HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKI- 189
Query: 943 AGVLGYRAPELAASKKPHPSF--KSDVYAFGVILLELLTG 980
G Y APE+ H ++ K DV++ GVIL LL+G
Sbjct: 190 -GTAYYIAPEVL-----HGTYDEKCDVWSTGVILYILLSG 223
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R E
Sbjct: 146 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDD----EMTGYVATRW 199
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 200 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R E
Sbjct: 146 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDD----EMTGYVATRW 199
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 200 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 232
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.010, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 831 HPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVAR 890
HP++V L G T++ I+ + + G L SFL R L A + A ++
Sbjct: 70 HPHIVKLIGVI---TENPVWIIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLST 122
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRA 950
L YL R V H ++ A N+L+ D ++ D+ L R M + + + + A
Sbjct: 123 ALAYLESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 180
Query: 951 PELAASKKPHPSFKSDVYAFGVILLELL 978
PE ++ + SDV+ FGV + E+L
Sbjct: 181 PESINFRRFTSA--SDVWMFGVCMWEIL 206
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.010, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 831 HPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVAR 890
HP++V L G T++ I+ + + G L SFL R L A + A ++
Sbjct: 67 HPHIVKLIGVI---TENPVWIIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLST 119
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRA 950
L YL R V H ++ A N+L+ D ++ D+ L R M + + + + A
Sbjct: 120 ALAYLESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 177
Query: 951 PELAASKKPHPSFKSDVYAFGVILLELL 978
PE ++ + SDV+ FGV + E+L
Sbjct: 178 PESINFRRFTSA--SDVWMFGVCMWEIL 203
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.010, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 831 HPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVAR 890
HP++V L G T++ I+ + + G L SFL R L A + A ++
Sbjct: 70 HPHIVKLIGVI---TENPVWIIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLST 122
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRA 950
L YL R V H ++ A N+L+ D ++ D+ L R M + + + + A
Sbjct: 123 ALAYLESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 180
Query: 951 PELAASKKPHPSFKSDVYAFGVILLELL 978
PE ++ + SDV+ FGV + E+L
Sbjct: 181 PESINFRRFTSA--SDVWMFGVCMWEIL 206
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 39.7 bits (91), Expect = 0.010, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 831 HPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVAR 890
HP++V L G T++ I+ + + G L SFL R L A + A ++
Sbjct: 72 HPHIVKLIGVI---TENPVWIIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLST 124
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRA 950
L YL R V H ++ A N+L+ D ++ D+ L R M + + + + A
Sbjct: 125 ALAYLESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 182
Query: 951 PELAASKKPHPSFKSDVYAFGVILLELL 978
PE ++ + SDV+ FGV + E+L
Sbjct: 183 PESINFRRFTSA--SDVWMFGVCMWEIL 208
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 136 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGY----VATRW 189
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 190 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGY----VATRW 187
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 188 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Z81|A Chain A, Crystal Structure Of The Tlr1-tlr2 Heterodimer Induced By
Binding Of A Tri-acylated Lipopeptide
pdb|2Z82|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 86 DLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQ 145
DL +NL +L+ S N+I G D SLE LD+SDN SS S G L SL+
Sbjct: 45 DLRACANLQVLILKSSRINTIEG---DAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLK 101
Query: 146 NLSLAGNNFSGL-IPDSVSGLVSIQSLDL 173
L+L GN + L + L ++Q+L +
Sbjct: 102 YLNLMGNPYQTLGVTSLFPNLTNLQTLRI 130
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 17/144 (11%)
Query: 52 IDFDGCP--------SSWNGIVCNGGNVAGVVLDNLGLSAAA---DLS-VFSNLSMLVKL 99
++FD C S + +V G V V + L + DLS V+S L + ++
Sbjct: 256 VEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRI 315
Query: 100 SMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSL---PSGIGKLESLQNLSLAGNNFSG 156
++ N+ + V KSLEFLD+S+NL + G SLQ L L+ N+
Sbjct: 316 TVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRS 375
Query: 157 LIP--DSVSGLVSIQSLDLSHNSF 178
+ + + L ++ SLD+S N+F
Sbjct: 376 MQKTGEILLTLKNLTSLDISRNTF 399
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 455 LRVLDLSFNHLDGPFLTNLLNSSTLQELHLADNLLTGVLDFSPPSVSNLQVLDLSHNRLN 514
++ LDLSFN + +L + LQ L L + + + + S+ +L+ LDLS N L+
Sbjct: 28 MKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLS 87
Query: 515 GYFPDRLGSLTGLKVLCLAGNNISGSLPTSM-ANMTSLSSLVI 556
G L+ LK L L GN TS+ N+T+L +L I
Sbjct: 88 SLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRI 130
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 140 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGY----VATRW 193
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 194 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 226
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R E
Sbjct: 157 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDD----EMXGYVATRW 210
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 211 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 243
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 39.3 bits (90), Expect = 0.010, Method: Composition-based stats.
Identities = 76/301 (25%), Positives = 120/301 (39%), Gaps = 55/301 (18%)
Query: 784 LGRSSHGTSYRATLEN------GMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGL 837
LG + G + A N M + VK L++ R N++H ++V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK- 81
Query: 838 RGYYWGPTQHEKLILS-DYISPGSLASFLY-----------DRPGRKGPPLTWAQRLKIA 885
+Y + LI+ +Y+ G L FL +P + L +Q L IA
Sbjct: 82 --FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 886 VDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV 945
+A G+ YL V H +L N L+ G +L ++ D+ + R + ++ +
Sbjct: 140 SQIASGMVYLASQHFV-HRDLATRNCLV-GANLLVKIGDFGMSRDVYSTDYY-RVGGHTM 196
Query: 946 LGYR--APELAASKKPHPSFKSDVYAFGVILLELLT-GRCAGDVISGEGAGVDLTDWMQL 1002
L R PE +K + +SDV++FGVIL E+ T G+ W QL
Sbjct: 197 LPIRWMPPESIMYRKF--TTESDVWSFGVILWEIFTYGK---------------QPWFQL 239
Query: 1003 KVAEGHGSDCFDAAVMPE--MVNPAAEKGMKEVLGIALRCI-RSVSERPGIKTIYEDLSS 1059
E +C + E V P KEV + L C R +R IK IY+ L +
Sbjct: 240 SNTE--VIECITQGRVLERPRVCP------KEVYDVMLGCWQREPQQRLNIKEIYKILHA 291
Query: 1060 I 1060
+
Sbjct: 292 L 292
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R E
Sbjct: 145 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDD----EMTGYVATRW 198
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 199 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 231
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R E
Sbjct: 157 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDD----EMTGYVATRW 210
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 211 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 243
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R E
Sbjct: 154 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDD----EMTGYVATRW 207
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 208 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 240
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGY----VATRW 187
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 188 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 136 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGY----VATRW 189
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 190 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 222
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLM--TQAGTIEQILDAGV 945
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R AG +
Sbjct: 130 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMAGFV------AT 181
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 182 RWYRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 216
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R E
Sbjct: 153 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDD----EMTGYVATRW 206
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 207 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 239
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGY----VATRW 187
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 188 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGY----VATRW 187
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 188 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 33/212 (15%)
Query: 782 EVLGRSSHGTSYRATLENGMFLTVKWLR-----EGVAKQRXXXXXXXXXXXNIRHPNVVG 836
E +G ++G Y+A G + +K +R EG+ + HPN+V
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIP---STAIREISLLKELHHPNIVS 83
Query: 837 LRGYYWGPTQHEKLILS---DYISPGSLASFLYDRPGRKGPPLTWAQRLKIAV-DVARGL 892
L H + L+ +++ ++ G + ++KI + + RG+
Sbjct: 84 LID-----VIHSERCLTLVFEFMEKDLKKVLDENKTGLQD------SQIKIYLYQLLRGV 132
Query: 893 NYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHR---LMTQAGTIEQILDAGVLGYR 949
+ H R + H +LK N+L++ D ++AD+ L R + ++ T E + L YR
Sbjct: 133 AHCHQHRIL-HRDLKPQNLLINS-DGALKLADFGLARAFGIPVRSYTHEVV----TLWYR 186
Query: 950 APELAASKKPHPSFKSDVYAFGVILLELLTGR 981
AP++ K + S D+++ G I E++TG+
Sbjct: 187 APDVLMGSKKY-STSVDIWSIGCIFAEMITGK 217
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGY----VATRW 187
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 188 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 141 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGY----VATRW 194
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 195 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGY----VATRW 187
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 188 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 136 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGY----VATRW 189
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 190 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 222
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGY----VATRW 187
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 188 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 139 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGY----VATRW 192
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 193 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 225
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 33/212 (15%)
Query: 782 EVLGRSSHGTSYRATLENGMFLTVKWLR-----EGVAKQRXXXXXXXXXXXNIRHPNVVG 836
E +G ++G Y+A G + +K +R EG+ + HPN+V
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIP---STAIREISLLKELHHPNIVS 83
Query: 837 LRGYYWGPTQHEKLILS---DYISPGSLASFLYDRPGRKGPPLTWAQRLKIAV-DVARGL 892
L H + L+ +++ ++ G + ++KI + + RG+
Sbjct: 84 LIDVI-----HSERCLTLVFEFMEKDLKKVLDENKTGLQD------SQIKIYLYQLLRGV 132
Query: 893 NYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHR---LMTQAGTIEQILDAGVLGYR 949
+ H R + H +LK N+L++ D ++AD+ L R + ++ T E + L YR
Sbjct: 133 AHCHQHRIL-HRDLKPQNLLINS-DGALKLADFGLARAFGIPVRSYTHEVV----TLWYR 186
Query: 950 APELAASKKPHPSFKSDVYAFGVILLELLTGR 981
AP++ K + S D+++ G I E++TG+
Sbjct: 187 APDVLMGSKKY-STSVDIWSIGCIFAEMITGK 217
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 133 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGY----VATRW 186
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 187 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 219
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 39.3 bits (90), Expect = 0.011, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 885 AVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAG 944
A ++A GL +L + + + +LK N++LD + + ++AD+ + + G + G
Sbjct: 127 AAEIAIGLFFLQ-SKGIIYRDLKLDNVMLDS-EGHIKIADFGMCKENIWDGVTTKXF-CG 183
Query: 945 VLGYRAPELAASKKPHPSFKS-DVYAFGVILLELLTGR 981
Y APE+ A + P KS D +AFGV+L E+L G+
Sbjct: 184 TPDYIAPEIIAYQ---PYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGY----VATRW 187
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 188 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R E
Sbjct: 153 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDD----EMTGYVATRW 206
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 207 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R E
Sbjct: 154 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDD----EMTGYVATRW 207
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 208 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 240
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R E
Sbjct: 131 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDD----EMTGYVATRW 184
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 185 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 217
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGY----VATRW 187
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 188 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 139 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGY----VATRW 192
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 193 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 225
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R E
Sbjct: 132 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDD----EMTGYVATRW 185
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 186 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 218
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDXELKILDFGLARHTDDEMTGY----VATRW 187
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGRC 982
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 188 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 139 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDXELKILDFGLARHTDDEMTGY----VATRW 192
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 193 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 145 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDXELKILDFGLARHTDDEMTGY----VATRW 198
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 199 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 231
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 39.3 bits (90), Expect = 0.012, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 9/129 (6%)
Query: 850 LILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKAT 909
I ++ G+L ++ R G K L L++ + +G++Y+H + + + +LK +
Sbjct: 96 FIQMEFCDKGTLEQWIEKRRGEK---LDKVLALELFEQITKGVDYIHSKKLI-NRDLKPS 151
Query: 910 NILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFKSDVYA 969
NI L ++ D+ L + G ++ G L Y +PE +S+ + D+YA
Sbjct: 152 NIFLVDTK-QVKIGDFGLVTSLKNDG--KRXRSKGTLRYMSPEQISSQDYGK--EVDLYA 206
Query: 970 FGVILLELL 978
G+IL ELL
Sbjct: 207 LGLILAELL 215
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R E
Sbjct: 130 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDD----EMTGYVATRW 183
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 184 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 216
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 139 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDXELKILDFGLARHTDDEMTGY----VATRW 192
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 193 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 225
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 144 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGY----VATRW 197
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 198 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 230
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 90/223 (40%), Gaps = 37/223 (16%)
Query: 782 EVLGRSSHGTSYRATL------ENGMFLTVKWLREGV-AKQRXXXXXXXXXXXNIRHPNV 834
E LG G Y+ L E + +K L++ R ++HPNV
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 835 VGLRGYYWGPTQHEKL-ILSDYISPGSLASFLY-------------DRPGRKG--PPLTW 878
V L G T+ + L ++ Y S G L FL DR + PP
Sbjct: 92 VCLLGVV---TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP--- 145
Query: 879 AQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIE 938
+ + +A G+ YL V H +L N+L+ LN +++D L R A
Sbjct: 146 -DFVHLVAQIAAGMEYLSSHHVV-HKDLATRNVLVYD-KLNVKISDLGLFR-EVYAADYY 201
Query: 939 QILDAGVLGYR--APELAASKKPHPSFKSDVYAFGVILLELLT 979
++L +L R APE K S SD++++GV+L E+ +
Sbjct: 202 KLLGNSLLPIRWMAPEAIMYGKF--SIDSDIWSYGVVLWEVFS 242
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R E
Sbjct: 131 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDD----EMTGYVATRW 184
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 185 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 217
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 39.3 bits (90), Expect = 0.013, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R E
Sbjct: 130 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDD----EMTGYVATRW 183
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 184 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 216
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R E
Sbjct: 130 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDD----EMTGYVATRW 183
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 184 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 216
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 886 VDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV 945
++ L+YLH ++ V + +LK N++LD D + ++ D+ L + + G + G
Sbjct: 258 AEIVSALDYLHSEKNVVYRDLKLENLMLD-KDGHIKITDFGLCKEGIKDGATMKTF-CGT 315
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y APE+ + D + GV++ E++ GR
Sbjct: 316 PEYLAPEVLEDNDYGRAV--DWWGLGVVMYEMMCGR 349
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 140 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGY----VATRW 193
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 194 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 226
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 886 VDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV 945
++ L+YLH ++ V + +LK N++LD D + ++ D+ L + + G + G
Sbjct: 255 AEIVSALDYLHSEKNVVYRDLKLENLMLD-KDGHIKITDFGLCKEGIKDGATMKTF-CGT 312
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y APE+ + D + GV++ E++ GR
Sbjct: 313 PEYLAPEVLEDNDYGRAV--DWWGLGVVMYEMMCGR 346
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 38.9 bits (89), Expect = 0.014, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 70/135 (51%), Gaps = 8/135 (5%)
Query: 850 LILSDYISPGSLASFLYD-RPGRKGPPL----TWAQRLKIAVDVARGLNYLHFDRAVPHG 904
L++ + ++ G L S+L RP + P+ + ++ +++A ++A G+ YL+ ++ V H
Sbjct: 91 LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV-HR 149
Query: 905 NLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFK 964
+L A N + D ++ D+ + R + + + G+L R + K +
Sbjct: 150 DLAARNCXV-AEDFTVKIGDFGMTRDIYETDYYRK-GGKGLLPVRWMSPESLKDGVFTTY 207
Query: 965 SDVYAFGVILLELLT 979
SDV++FGV+L E+ T
Sbjct: 208 SDVWSFGVVLWEIAT 222
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 148/405 (36%), Gaps = 88/405 (21%)
Query: 216 LQVLDFHGNKLDGHLDGEF---------FLLTNASHIDFSGNMF--VGSSSQKFLPGLSQ 264
L++LD GN + G F F L A HI +G F + Q GL++
Sbjct: 206 LEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLAR 265
Query: 265 S-VQYLNLSLNQLTGSLVNGGELQLFENLKVLDLSYNQLTGEL-PGFNFVYELQVLKLSN 322
S V++L+LS + SL N + ++LKVL+L+YN++ F + LQVL LS
Sbjct: 266 SSVRHLDLS-HGFVFSL-NSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSY 323
Query: 323 NRFSGFIPXXXXXXXXXXXXXXXXXXXXXXGSVSMILSTNLHMLNLSSNGLTG------- 375
N + L L+L N LT
Sbjct: 324 NLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSI 383
Query: 376 -----------ELPLLTGSCAVLDLSNNQFEG--NLSRILKWGNIEYLDLSRNHLTGSIP 422
LP + + ++ LS N+ E L +L+ +++ L L++N +
Sbjct: 384 PDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSG 443
Query: 423 EETPQFLRXXXXXXXXXXXXXXXPKVIIQYQKLRVLDLSFNHLDGPFLTNLLNSSTLQEL 482
++TP + P L L + +L
Sbjct: 444 DQTPS--------------------------------------ENPSLEQLFLGENMLQL 465
Query: 483 HLADNLLTGVLDFSPPSVSNLQVLDLSHNRLNGYFPDRLGSLTGLKVLCLAGNNIS---- 538
L V + +S+LQVL L+HN LN P LT L+ L L N ++
Sbjct: 466 AWETELCWDVFE----GLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSH 521
Query: 539 GSLPTSMANMTSLSSLVISQNHFTGPLPNNLPNSLETFNVSYNDF 583
LP +L L IS+N P P+ SL ++++N F
Sbjct: 522 NDLP------ANLEILDISRNQLLAPNPDVFV-SLSVLDITHNKF 559
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 137/346 (39%), Gaps = 67/346 (19%)
Query: 80 GLSAAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIG 139
G + + VF L L L+++ N I+ + + +L+ L++S NL S
Sbjct: 276 GFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFY 335
Query: 140 KLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXXXXX 199
L + + L N+ + + + L +Q+LDL N+ +
Sbjct: 336 GLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALT-------------------T 376
Query: 200 XGFSKRIPRGF----------ELILGLQVLDFHGNKLDGHLDGEFFLLTNASHID---FS 246
F IP F ++ L ++ N+L+ LD +FLL H+ +
Sbjct: 377 IHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLEN-LDILYFLL-RVPHLQILILN 434
Query: 247 GNMFVGSSSQKFLPGLSQSVQYLNLSLNQLTGSLVNGGELQLFE---NLKVLDLSYNQLT 303
N F S + P + S++ L L N L + +FE +L+VL L++N L
Sbjct: 435 QNRFSSCSGDQ-TPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLN 493
Query: 304 GELPG-FNFVYELQVLKLSNNRFSGFIPXXXXXXXXXXXXXXXXXXXXXXGSVSMILSTN 362
PG F+ + L+ L L++NR + L N
Sbjct: 494 SLPPGVFSHLTALRGLSLNSNRLTVLSHND--------------------------LPAN 527
Query: 363 LHMLNLSSNGLTGELPLLTGSCAVLDLSNNQF--EGNLSRILKWGN 406
L +L++S N L P + S +VLD+++N+F E LS + W N
Sbjct: 528 LEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECELSTFINWLN 573
Score = 30.4 bits (67), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 90 FSNLSMLVKLSMSNNSISGV-IPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLE--SLQN 146
F NL L +L +S N I + + + G SL+ +D S N + L+ +L
Sbjct: 119 FRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSF 178
Query: 147 LSLAGNNFSGLIPDSVSGLVS------IQSLDLSHNSFSGSLPPALTRXXXXXXXXXXXX 200
SLA N+ + ++ ++ LD+S N ++ +
Sbjct: 179 FSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDI----------------TG 222
Query: 201 GFSKRIPR--GFELILGLQVLD----FHGNKLDGHLDGEFFLLTNASHIDFSGNMFVGSS 254
FS I + F LIL ++ FH K ++ H+D S FV S
Sbjct: 223 NFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHG-FVFSL 281
Query: 255 SQKFLPGLSQSVQYLNLSLNQLTGSLVNGGELQLFENLKVLDLSYNQLTGELPGFNF 311
+ + L + ++ LNL+ N++ + +NL+VL+LSYN L GEL NF
Sbjct: 282 NSRVFETL-KDLKVLNLAYNKINK--IADEAFYGLDNLQVLNLSYN-LLGELYSSNF 334
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 90/223 (40%), Gaps = 37/223 (16%)
Query: 782 EVLGRSSHGTSYRATL------ENGMFLTVKWLREGV-AKQRXXXXXXXXXXXNIRHPNV 834
E LG G Y+ L E + +K L++ R ++HPNV
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 835 VGLRGYYWGPTQHEKL-ILSDYISPGSLASFLY-------------DRPGRKG--PPLTW 878
V L G T+ + L ++ Y S G L FL DR + PP
Sbjct: 75 VCLLGVV---TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP--- 128
Query: 879 AQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIE 938
+ + +A G+ YL V H +L N+L+ LN +++D L R A
Sbjct: 129 -DFVHLVAQIAAGMEYLSSHHVV-HKDLATRNVLVYD-KLNVKISDLGLFR-EVYAADYY 184
Query: 939 QILDAGVLGYR--APELAASKKPHPSFKSDVYAFGVILLELLT 979
++L +L R APE K S SD++++GV+L E+ +
Sbjct: 185 KLLGNSLLPIRWMAPEAIMYGKF--SIDSDIWSYGVVLWEVFS 225
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 17/137 (12%)
Query: 851 ILSDYISPGSLASFLYDRPGRKGPPLT--WAQRLKIAVDVARGLNYLHFDRAVPHGNLKA 908
++ DY G L + L R + + + IA+D L+Y+H D +K
Sbjct: 151 LVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRD-------IKP 203
Query: 909 TNILLDGPDLNARVADY--CLHRLMTQAGTIEQILDAGVLGYRAPELAASK---KPHPSF 963
NIL+D + + R+AD+ CL +LM + GT++ + G Y +PE+ + K
Sbjct: 204 DNILMDM-NGHIRLADFGSCL-KLM-EDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGP 260
Query: 964 KSDVYAFGVILLELLTG 980
+ D ++ GV + E+L G
Sbjct: 261 ECDWWSLGVCMYEMLYG 277
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 140 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGY----VATRW 193
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 194 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 226
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 38.9 bits (89), Expect = 0.015, Method: Composition-based stats.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 19/193 (9%)
Query: 798 ENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGLRGYYWGPTQHEKLILS-DYI 856
++ + + VK L++ R N++H ++V +Y + + LI+ +Y+
Sbjct: 41 QDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK---FYGVCVEGDPLIMVFEYM 97
Query: 857 SPGSLASFLYDRP------GRKGPP--LTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKA 908
G L FL PP LT +Q L IA +A G+ YL V H +L
Sbjct: 98 KHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFV-HRDLAT 156
Query: 909 TNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYR--APELAASKKPHPSFKSD 966
N L+ G +L ++ D+ + R + ++ +L R PE +K + +SD
Sbjct: 157 RNCLV-GENLLVKIGDFGMSRDVYSTDYY-RVGGHTMLPIRWMPPESIMYRKF--TTESD 212
Query: 967 VYAFGVILLELLT 979
V++ GV+L E+ T
Sbjct: 213 VWSLGVVLWEIFT 225
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 38.9 bits (89), Expect = 0.016, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 64/155 (41%), Gaps = 11/155 (7%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++ HPN++ + + H I+ + G L + R G L+ ++
Sbjct: 76 SLDHPNIIKIFEVF--EDYHNMYIVMETCEGGELLERIVSAQAR-GKALSEGYVAELMKQ 132
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLD--GPDLNARVADYCLHRLMTQAGTIEQILDAGV 945
+ L Y H V H +LK NIL P ++ D+ L L AG
Sbjct: 133 MMNALAYFHSQHVV-HKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE--HSTNAAGT 189
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
Y APE+ K +FK D+++ GV++ LLTG
Sbjct: 190 ALYMAPEVF---KRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 53/126 (42%), Gaps = 3/126 (2%)
Query: 134 LPSGIGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXX 193
LP GI + + L L GN F+ L+P +S + +DLS+N S + +
Sbjct: 25 LPKGIPR--DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLL 81
Query: 194 XXXXXXXGFSKRIPRGFELILGLQVLDFHGNKLDGHLDGEFFLLTNASHIDFSGNMFVGS 253
PR F+ + L++L HGN + +G F L+ SH+ N
Sbjct: 82 TLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141
Query: 254 SSQKFL 259
+ ++L
Sbjct: 142 CNMQWL 147
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 459 DLSFNHLDGPFLT----NLLNSSTLQELHLADNLLTGVLDFSPPSVSNLQVLDLSHNRLN 514
D++ +LDG T L N L + L++N ++ + + S +++ L L LS+NRL
Sbjct: 32 DVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 91
Query: 515 GYFPDRLGSLTGLKVLCLAGNNISGSLPTSMANMTSLSSLVISQN 559
P L L++L L GN+IS + ++++LS L I N
Sbjct: 92 CIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN 136
Score = 33.5 bits (75), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%)
Query: 109 VIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNLSLAGNNFSGLIPDSVSGLVSI 168
++P + ++K L +D+S+N S+ + L L L+ N + P + GL S+
Sbjct: 45 LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSL 104
Query: 169 QSLDLSHNSFS 179
+ L L N S
Sbjct: 105 RLLSLHGNDIS 115
Score = 30.0 bits (66), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 29/63 (46%)
Query: 90 FSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNLSL 149
FSN++ L+ L +S N + + P KSL L + N S L +L +L++
Sbjct: 74 FSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAI 133
Query: 150 AGN 152
N
Sbjct: 134 GAN 136
Score = 29.6 bits (65), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 90 FSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNLSL 149
SN L + +SNN IS + + + L L +S N P L+SL+ LSL
Sbjct: 50 LSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109
Query: 150 AGNNFSGLIPD 160
GN+ S ++P+
Sbjct: 110 HGNDIS-VVPE 119
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 87/204 (42%), Gaps = 13/204 (6%)
Query: 779 APAEVLGRSSHGTSYRAT-LENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGL 837
+ E+LG G ++ G+ L K ++ K + + H N++ L
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 838 RGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHF 897
+ ++++ +++ +Y+ G L +DR + LT + + G+ ++H
Sbjct: 152 YDAF--ESKNDIVLVMEYVDGGEL----FDRIIDESYNLTELDTILFMKQICEGIRHMH- 204
Query: 898 DRAVPHGNLKATNILLDGPDLNA-RVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAAS 956
+ H +LK NIL D ++ D+ L R ++ ++ G + APE+
Sbjct: 205 QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLK--VNFGTPEFLAPEVV-- 260
Query: 957 KKPHPSFKSDVYAFGVILLELLTG 980
SF +D+++ GVI LL+G
Sbjct: 261 NYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 38.9 bits (89), Expect = 0.017, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 890 RGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYR 949
RGL Y+H + H +LK +N+ ++ D R+ D+ L R + E YR
Sbjct: 134 RGLKYIH-SAGIIHRDLKPSNVAVN-EDCELRILDFGLARQADE----EMTGYVATRWYR 187
Query: 950 APELAASKKPHPSFKSDVYAFGVILLELLTGR 981
APE+ + H + D+++ G I+ ELL G+
Sbjct: 188 APEIMLNWM-HYNQTVDIWSVGCIMAELLQGK 218
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 136 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDSELKILDFGLARHTDDEMTGY----VATRW 189
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 190 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 222
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 38.5 bits (88), Expect = 0.019, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDV 888
+ HP +V L G Q ++ +++ G L+ +L + G L + +DV
Sbjct: 79 LSHPKLVQLYGVCL--EQAPICLVFEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDV 132
Query: 889 ARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY 948
G+ YL + V H +L A N L+ G + +V+D+ + R + + +
Sbjct: 133 CEGMAYLE-EACVIHRDLAARNCLV-GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKW 190
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+PE+ + + S KSDV++FGV++ E+ +
Sbjct: 191 ASPEVFSFSRY--SSKSDVWSFGVLMWEVFS 219
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D+ L R T
Sbjct: 140 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDSELKILDFGLARHTDDEMTGY----VATRW 193
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 194 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 226
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 890 RGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYR 949
RGL Y+H + H +LK +N+ ++ D R+ D+ L R QA E YR
Sbjct: 142 RGLKYIH-SAGIIHRDLKPSNVAVN-EDSELRILDFGLAR---QADE-EMTGYVATRWYR 195
Query: 950 APELAASKKPHPSFKSDVYAFGVILLELLTGRC 982
APE+ + H + D+++ G I+ ELL G+
Sbjct: 196 APEIMLNWM-HYNQTVDIWSVGCIMAELLQGKA 227
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 38.5 bits (88), Expect = 0.021, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 884 IAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNA--RVADYCLHRLMTQAGTIEQIL 941
I V G YLH V H +LK N+LL+ +A ++ D+ L G +++ L
Sbjct: 126 IMKQVLSGTTYLHKHNIV-HRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL 184
Query: 942 DAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
G Y APE+ K K DV++ GVIL LL G
Sbjct: 185 --GTAYYIAPEVLRKKYDE---KCDVWSCGVILYILLCG 218
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 38.5 bits (88), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 890 RGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYR 949
RGL Y+H + H +LK +N+ ++ D R+ D+ L R QA E YR
Sbjct: 142 RGLKYIH-SAGIIHRDLKPSNVAVN-EDSELRILDFGLAR---QADE-EMTGYVATRWYR 195
Query: 950 APELAASKKPHPSFKSDVYAFGVILLELLTGRC 982
APE+ + H + D+++ G I+ ELL G+
Sbjct: 196 APEIMLNWM-HYNQTVDIWSVGCIMAELLQGKA 227
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 19/162 (11%)
Query: 829 IRHPNVVGLRGYYWGPTQHEKL-----ILSDYISPGSLASFL--YDRPGRKGPPLTWAQR 881
+ HPN+V L+ Y++ + ++ ++ +Y+ P +L Y R PP+
Sbjct: 76 LHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYV-PDTLHRCCRNYYRRQVAPPPIL---- 130
Query: 882 LKIAV-DVARGLNYLHFDRA-VPHGNLKATNILLDGPDLNARVADY-CLHRLMTQAGTIE 938
+K+ + + R + LH V H ++K N+L++ D ++ D+ +L +
Sbjct: 131 IKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA 190
Query: 939 QILDAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
I YRAPEL + H + D+++ G I E++ G
Sbjct: 191 YICSR---YYRAPELIFGNQ-HYTTAVDIWSVGCIFAEMMLG 228
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 876 LTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAG 935
LT + + VA+G+ +L R H +L A NILL ++ ++ D+ L R + +
Sbjct: 188 LTLEHLICYSFQVAKGMEFLA-SRKCIHRDLAARNILLSEKNV-VKICDFGLARDIYKDP 245
Query: 936 TIEQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ DA + L + APE + + +SDV++FGV+L E+ +
Sbjct: 246 DYVRKGDARLPLKWMAPETIFDRVY--TIQSDVWSFGVLLWEIFS 288
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 876 LTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAG 935
LT + + VA+G+ +L R H +L A NILL ++ ++ D+ L R + +
Sbjct: 190 LTLEHLICYSFQVAKGMEFLA-SRKCIHRDLAARNILLSEKNV-VKICDFGLARDIYKDP 247
Query: 936 TIEQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ DA + L + APE + + +SDV++FGV+L E+ +
Sbjct: 248 DYVRKGDARLPLKWMAPETIFDRVY--TIQSDVWSFGVLLWEIFS 290
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With Flavonoid
Glycoside Quercitrin
Length = 305
Score = 38.1 bits (87), Expect = 0.024, Method: Composition-based stats.
Identities = 61/264 (23%), Positives = 108/264 (40%), Gaps = 49/264 (18%)
Query: 782 EVLGRSSHGTSYRATLENG----MFLTVKWLREGVAK--QRXXXXXXXXXXXNIRHPNVV 835
+VLG+ S G + +G +K L++ K R + HP +V
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYL 895
L +Y T+ + ++ D++ G L + L K T ++A L++L
Sbjct: 91 KL--HYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFTEEDVKFYLAELALALDHL 143
Query: 896 HFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILD--------AGVLG 947
H + + +LK NILLD H +T G ++ +D G +
Sbjct: 144 H-SLGIIYRDLKPENILLDEEG----------HIKLTDFGLSKESIDHEKKAYSFCGTVE 192
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISGEGAGVDLTDWMQLKVAEG 1007
Y APE+ +++ H +D ++FGV++ E+LTG + +G T M LK G
Sbjct: 193 YMAPEVV-NRRGHTQ-SADWWSFGVLMFEMLTG-----TLPFQGKDRKETMTMILKAKLG 245
Query: 1008 HGSDCFDAAVMPEMVNPAAEKGMK 1031
MP+ ++P A+ ++
Sbjct: 246 ----------MPQFLSPEAQSLLR 259
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 876 LTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAG 935
LT + + VA+G+ +L R H +L A NILL ++ ++ D+ L R + +
Sbjct: 197 LTLEHLICYSFQVAKGMEFLA-SRKCIHRDLAARNILLSEKNV-VKICDFGLARDIYKDP 254
Query: 936 TIEQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ DA + L + APE + + +SDV++FGV+L E+ +
Sbjct: 255 DYVRKGDARLPLKWMAPETIFDRVY--TIQSDVWSFGVLLWEIFS 297
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 38.1 bits (87), Expect = 0.024, Method: Composition-based stats.
Identities = 61/264 (23%), Positives = 108/264 (40%), Gaps = 49/264 (18%)
Query: 782 EVLGRSSHGTSYRATLENG----MFLTVKWLREGVAK--QRXXXXXXXXXXXNIRHPNVV 835
+VLG+ S G + +G +K L++ K R + HP +V
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYL 895
L +Y T+ + ++ D++ G L + L K T ++A L++L
Sbjct: 90 KL--HYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFTEEDVKFYLAELALALDHL 142
Query: 896 HFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILD--------AGVLG 947
H + + +LK NILLD H +T G ++ +D G +
Sbjct: 143 H-SLGIIYRDLKPENILLDEEG----------HIKLTDFGLSKESIDHEKKAYSFCGTVE 191
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISGEGAGVDLTDWMQLKVAEG 1007
Y APE+ +++ H +D ++FGV++ E+LTG + +G T M LK G
Sbjct: 192 YMAPEVV-NRRGHTQ-SADWWSFGVLMFEMLTG-----TLPFQGKDRKETMTMILKAKLG 244
Query: 1008 HGSDCFDAAVMPEMVNPAAEKGMK 1031
MP+ ++P A+ ++
Sbjct: 245 ----------MPQFLSPEAQSLLR 258
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 38.1 bits (87), Expect = 0.024, Method: Composition-based stats.
Identities = 61/264 (23%), Positives = 108/264 (40%), Gaps = 49/264 (18%)
Query: 782 EVLGRSSHGTSYRATLENG----MFLTVKWLREGVAK--QRXXXXXXXXXXXNIRHPNVV 835
+VLG+ S G + +G +K L++ K R + HP +V
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 836 GLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYL 895
L +Y T+ + ++ D++ G L + L K T ++A L++L
Sbjct: 90 KL--HYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFTEEDVKFYLAELALALDHL 142
Query: 896 HFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILD--------AGVLG 947
H + + +LK NILLD H +T G ++ +D G +
Sbjct: 143 H-SLGIIYRDLKPENILLDEEG----------HIKLTDFGLSKESIDHEKKAYSFCGTVE 191
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGRCAGDVISGEGAGVDLTDWMQLKVAEG 1007
Y APE+ +++ H +D ++FGV++ E+LTG + +G T M LK G
Sbjct: 192 YMAPEVV-NRRGHTQ-SADWWSFGVLMFEMLTG-----TLPFQGKDRKETMTMILKAKLG 244
Query: 1008 HGSDCFDAAVMPEMVNPAAEKGMK 1031
MP+ ++P A+ ++
Sbjct: 245 ----------MPQFLSPEAQSLLR 258
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 876 LTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAG 935
LT + + VA+G+ +L R H +L A NILL ++ ++ D+ L R + +
Sbjct: 195 LTLEHLICYSFQVAKGMEFLA-SRKCIHRDLAARNILLSEKNV-VKICDFGLARDIYKDP 252
Query: 936 TIEQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ DA + L + APE + + +SDV++FGV+L E+ +
Sbjct: 253 DYVRKGDARLPLKWMAPETIFDRVY--TIQSDVWSFGVLLWEIFS 295
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 38.1 bits (87), Expect = 0.026, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 30/207 (14%)
Query: 784 LGRSSHGTSYRA-TLENGMFLTVKWL------REGVAKQRXXXXXXXXXXXNIRHPNVVG 836
LG+ G Y A +N + +K L +EGV Q ++RHPN++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ---LRREIEIQSHLRHPNILR 78
Query: 837 LRGYYWGPTQHEK---LILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLN 893
+ Y+ H++ ++ ++ G L L + GR + ++A L+
Sbjct: 79 MYNYF-----HDRKRIYLMLEFAPRGELYKEL-QKHGR----FDEQRSATFMEELADALH 128
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
Y H +R V H ++K N+L+ G ++AD+ A ++ + G L Y PE+
Sbjct: 129 YCH-ERKVIHRDIKPENLLM-GYKGELKIADFGWS---VHAPSLRRRXMCGTLDYLPPEM 183
Query: 954 AASKKPHPSFKSDVYAFGVILLELLTG 980
K H K D++ GV+ E L G
Sbjct: 184 IEGKT-HDE-KVDLWCAGVLCYEFLVG 208
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 38.1 bits (87), Expect = 0.026, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 30/207 (14%)
Query: 784 LGRSSHGTSYRA-TLENGMFLTVKWL------REGVAKQRXXXXXXXXXXXNIRHPNVVG 836
LG+ G Y A +N + +K L +EGV Q ++RHPN++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ---LRREIEIQSHLRHPNILR 78
Query: 837 LRGYYWGPTQHEK---LILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLN 893
+ Y+ H++ ++ ++ G L L + GR + ++A L+
Sbjct: 79 MYNYF-----HDRKRIYLMLEFAPRGELYKEL-QKHGR----FDEQRSATFMEELADALH 128
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
Y H +R V H ++K N+L+ G ++AD+ A ++ + G L Y PE+
Sbjct: 129 YCH-ERKVIHRDIKPENLLM-GYKGELKIADFGWS---VHAPSLRRRXMCGTLDYLPPEM 183
Query: 954 AASKKPHPSFKSDVYAFGVILLELLTG 980
K H K D++ GV+ E L G
Sbjct: 184 IEGKT-HDE-KVDLWCAGVLCYEFLVG 208
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 38.1 bits (87), Expect = 0.026, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 30/207 (14%)
Query: 784 LGRSSHGTSYRA-TLENGMFLTVKWL------REGVAKQRXXXXXXXXXXXNIRHPNVVG 836
LG+ G Y A +N + +K L +EGV Q ++RHPN++
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ---LRREIEIQSHLRHPNILR 79
Query: 837 LRGYYWGPTQHEK---LILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLN 893
+ Y+ H++ ++ ++ G L L + GR + ++A L+
Sbjct: 80 MYNYF-----HDRKRIYLMLEFAPRGELYKEL-QKHGR----FDEQRSATFMEELADALH 129
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPEL 953
Y H +R V H ++K N+L+ G ++AD+ A ++ + G L Y PE+
Sbjct: 130 YCH-ERKVIHRDIKPENLLM-GYKGELKIADFGWS---VHAPSLRRRXMCGTLDYLPPEM 184
Query: 954 AASKKPHPSFKSDVYAFGVILLELLTG 980
K H K D++ GV+ E L G
Sbjct: 185 IEGKT-HDE-KVDLWCAGVLCYEFLVG 209
>pdb|3ZYI|A Chain A, Netring2 In Complex With Ngl2
Length = 452
Score = 38.1 bits (87), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%)
Query: 78 NLGLSAAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSG 137
NLG+ D+ + L L +L MS N + P + SL+ L V ++ S +
Sbjct: 202 NLGMCNIKDMPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNA 261
Query: 138 IGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFS 179
L SL L+LA NN S L D + L + L L HN ++
Sbjct: 262 FDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 38.1 bits (87), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 99 LSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNLSLAGNNFSGLI 158
L + N I + D F LE L++++N+ S+ P L +L+ L L N LI
Sbjct: 37 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK-LI 95
Query: 159 PDSV-SGLVSIQSLDLSHNSF 178
P V +GL ++ LD+S N
Sbjct: 96 PLGVFTGLSNLTKLDISENKI 116
Score = 33.5 bits (75), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 113/274 (41%), Gaps = 35/274 (12%)
Query: 78 NLGLSAAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSG 137
N + +A + F+NL L L + +N + + +L LD+S+N L
Sbjct: 64 NENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYM 123
Query: 138 IGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXXX 197
L +L++L + N+ + + SGL S++ L L + + AL+
Sbjct: 124 FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRL 183
Query: 198 XXXGFSKRIPRGFELILGLQVLDF-HGNKLDGHLDGEFFLLT----NASHIDFSGNMFVG 252
+ F+ + L+VL+ H LD + L + +H + + ++
Sbjct: 184 RHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLA 243
Query: 253 SSSQKFLPGLSQSVQYLNLSLNQLT---GSLVN-----------GGELQLFE-------- 290
+L ++LNLS N ++ GS+++ GG+L + E
Sbjct: 244 VRHLVYL-------RFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLN 296
Query: 291 NLKVLDLSYNQLTG-ELPGFNFVYELQVLKLSNN 323
L+VL++S NQLT E F+ V L+ L L +N
Sbjct: 297 YLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN 330
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 38.1 bits (87), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 80/171 (46%), Gaps = 29/171 (16%)
Query: 830 RHPNVVGLRG--YYWGPTQHEKLILSDYISPGSLASFLYDR----------PGRK----- 872
+H N+V L G + GP L++++Y G L +FL + PG+
Sbjct: 93 QHENIVNLLGACTHGGPV----LVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLD 148
Query: 873 ---GPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHR 929
G PL L + VA+G+ +L + H ++ A N+LL + A++ D+ L R
Sbjct: 149 KEDGRPLELRDLLHFSSQVAQGMAFLASKNCI-HRDVAARNVLLTNGHV-AKIGDFGLAR 206
Query: 930 -LMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+M + I + + + APE + + +SDV+++G++L E+ +
Sbjct: 207 DIMNDSNYIVKGNARLPVKWMAPE--SIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 37.7 bits (86), Expect = 0.031, Method: Composition-based stats.
Identities = 58/218 (26%), Positives = 90/218 (41%), Gaps = 33/218 (15%)
Query: 784 LGRSSHGTSYRATLEN------GMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGL 837
LG + G + A N M + VK L+E R ++H ++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 838 RGYYWGPTQHEKLILS-DYISPGSLASFLYDR-PGRK--------GP-PLTWAQRLKIAV 886
G T+ L++ +Y+ G L FL P K P PL Q L +A
Sbjct: 86 FGVC---TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 142
Query: 887 DVARGLNYL---HFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDA 943
VA G+ YL HF H +L N L+ G L ++ D+ + R + ++
Sbjct: 143 QVAAGMVYLAGLHF----VHRDLATRNCLV-GQGLVVKIGDFGMSRDIYSTDYY-RVGGR 196
Query: 944 GVLGYR--APELAASKKPHPSFKSDVYAFGVILLELLT 979
+L R PE +K + +SDV++FGV+L E+ T
Sbjct: 197 TMLPIRWMPPESILYRKF--TTESDVWSFGVVLWEIFT 232
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 37.7 bits (86), Expect = 0.031, Method: Composition-based stats.
Identities = 58/218 (26%), Positives = 90/218 (41%), Gaps = 33/218 (15%)
Query: 784 LGRSSHGTSYRATLEN------GMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGL 837
LG + G + A N M + VK L+E R ++H ++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 838 RGYYWGPTQHEKLILS-DYISPGSLASFLYDR-PGRK--------GP-PLTWAQRLKIAV 886
G T+ L++ +Y+ G L FL P K P PL Q L +A
Sbjct: 80 FGVC---TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 136
Query: 887 DVARGLNYL---HFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDA 943
VA G+ YL HF H +L N L+ G L ++ D+ + R + ++
Sbjct: 137 QVAAGMVYLAGLHF----VHRDLATRNCLV-GQGLVVKIGDFGMSRDIYSTDYY-RVGGR 190
Query: 944 GVLGYR--APELAASKKPHPSFKSDVYAFGVILLELLT 979
+L R PE +K + +SDV++FGV+L E+ T
Sbjct: 191 TMLPIRWMPPESILYRKF--TTESDVWSFGVVLWEIFT 226
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 37.7 bits (86), Expect = 0.035, Method: Composition-based stats.
Identities = 58/218 (26%), Positives = 90/218 (41%), Gaps = 33/218 (15%)
Query: 784 LGRSSHGTSYRATLEN------GMFLTVKWLREGVAKQRXXXXXXXXXXXNIRHPNVVGL 837
LG + G + A N M + VK L+E R ++H ++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 838 RGYYWGPTQHEKLILS-DYISPGSLASFLYDR-PGRK--------GP-PLTWAQRLKIAV 886
G T+ L++ +Y+ G L FL P K P PL Q L +A
Sbjct: 109 FGVC---TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 165
Query: 887 DVARGLNYL---HFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDA 943
VA G+ YL HF H +L N L+ G L ++ D+ + R + ++
Sbjct: 166 QVAAGMVYLAGLHF----VHRDLATRNCLV-GQGLVVKIGDFGMSRDIYSTDYY-RVGGR 219
Query: 944 GVLGYR--APELAASKKPHPSFKSDVYAFGVILLELLT 979
+L R PE +K + +SDV++FGV+L E+ T
Sbjct: 220 TMLPIRWMPPESILYRKF--TTESDVWSFGVVLWEIFT 255
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 37.7 bits (86), Expect = 0.035, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 883 KIAVDVARGLNYLHFDRAVPHGNLKATNILLDGP--DLNARVADYCLHRLMTQAGTIEQI 940
+I V G+ Y+H V H +LK NILL+ D + ++ D+ L Q ++
Sbjct: 125 RIIKQVFSGITYMHKHNIV-HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR 183
Query: 941 LDAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
+ G Y APE+ K DV++ GVIL LL+G
Sbjct: 184 I--GTAYYIAPEVLRGTYDE---KCDVWSAGVILYILLSG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 37.7 bits (86), Expect = 0.035, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 883 KIAVDVARGLNYLHFDRAVPHGNLKATNILLDGP--DLNARVADYCLHRLMTQAGTIEQI 940
+I V G+ Y+H V H +LK NILL+ D + ++ D+ L Q ++
Sbjct: 125 RIIKQVFSGITYMHKHNIV-HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR 183
Query: 941 LDAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
+ G Y APE+ K DV++ GVIL LL+G
Sbjct: 184 I--GTAYYIAPEVLRGTYDE---KCDVWSAGVILYILLSG 218
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 37.7 bits (86), Expect = 0.037, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 887 DVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVL 946
++ L+YLH ++ V + +LK N++LD D + ++ D+ L + + G + G
Sbjct: 116 EIVSALDYLHSEKNVVYRDLKLENLMLD-KDGHIKITDFGLCKEGIKDGATMKXF-CGTP 173
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y APE+ + D + GV++ E++ GR
Sbjct: 174 EYLAPEVLEDNDYGRAV--DWWGLGVVMYEMMCGR 206
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 37.7 bits (86), Expect = 0.037, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 887 DVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVL 946
++ L+YLH ++ V + +LK N++LD D + ++ D+ L + + G + G
Sbjct: 117 EIVSALDYLHSEKNVVYRDLKLENLMLD-KDGHIKITDFGLCKEGIKDGATMKXF-CGTP 174
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y APE+ + D + GV++ E++ GR
Sbjct: 175 EYLAPEVLEDNDYGRAV--DWWGLGVVMYEMMCGR 207
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 37.7 bits (86), Expect = 0.037, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 887 DVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVL 946
++ L+YLH ++ V + +LK N++LD D + ++ D+ L + + G + G
Sbjct: 118 EIVSALDYLHSEKNVVYRDLKLENLMLD-KDGHIKITDFGLCKEGIKDGATMKXF-CGTP 175
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
Y APE+ + D + GV++ E++ GR
Sbjct: 176 EYLAPEVLEDNDYGRAV--DWWGLGVVMYEMMCGR 208
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D L R T
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDRGLARHTDDEMTGY----VATRW 187
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 188 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.4 bits (85), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D L R T
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDAGLARHTDDEMTGY----VATRW 187
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 188 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 37.4 bits (85), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 89/215 (41%), Gaps = 7/215 (3%)
Query: 96 LVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSL-PSGIGKLESLQNLSLAGNNF 154
L KL ++ NS + N F SL L + N+ L + KLE+LQ L L+ ++
Sbjct: 302 LKKLVLNANSFDQLCQINAASFPSLRDLYIKGNMRKLDLGTRCLEKLENLQKLDLSHSDI 361
Query: 155 --SGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXXXXXXGFSKRIPRG-FE 211
S + L +Q L+LS+N G A + P F+
Sbjct: 362 EASDCCNLQLKNLRHLQYLNLSYNEPLGLEDQAFKECPQLELLDVAFTHLHVKAPHSPFQ 421
Query: 212 LILGLQVLDFHGNKLDGHLDGEFFLLTNASHIDFSGNMFV-GSSSQKFLPGLSQSVQYLN 270
+ L+VL+ LD L + H++ GN F GS S+ L + S++ L
Sbjct: 422 NLHLLRVLNLSHCLLDTSNQHLLAGLQDLRHLNLQGNSFQDGSISKTNLLQMVGSLEILI 481
Query: 271 LSLNQLTGSLVNGGELQLFENLKVLDLSYNQLTGE 305
LS L ++ N+ LDLS+N LTG+
Sbjct: 482 LSSCNLLS--IDQQAFHGLRNVNHLDLSHNSLTGD 514
Score = 33.5 bits (75), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 81 LSAAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGK 140
L A S F NL +L L++S+ + + + L L++ N F S
Sbjct: 411 LHVKAPHSPFQNLHLLRVLNLSHCLLDTSNQHLLAGLQDLRHLNLQGNSFQDGSISKTNL 470
Query: 141 LE---SLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTR 188
L+ SL+ L L+ N + + GL ++ LDLSHNS +G AL+
Sbjct: 471 LQMVGSLEILILSSCNLLSIDQQAFHGLRNVNHLDLSHNSLTGDSMDALSH 521
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 37.4 bits (85), Expect = 0.047, Method: Composition-based stats.
Identities = 55/216 (25%), Positives = 87/216 (40%), Gaps = 28/216 (12%)
Query: 773 PEELSRAPAEVLGRSSHGTSYRA-TLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRH 831
P E+ E LG + G Y+A E G K + ++ H
Sbjct: 9 PNEVWEIVGE-LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDH 67
Query: 832 PNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARG 891
P +V L G Y+ KL + PG + R LT Q + +
Sbjct: 68 PYIVKLLGAYY---HDGKLWIMIEFCPGGAVDAIMLELDRG---LTEPQIQVVCRQMLEA 121
Query: 892 LNYLHFDRAVPHGNLKATNIL--LDGPDLNARVADYC-----LHRLMTQAGTIEQILDAG 944
LN+LH R + H +LKA N+L L+G + R+AD+ L L + I G
Sbjct: 122 LNFLHSKRII-HRDLKAGNVLMTLEG---DIRLADFGVSAKNLKTLQKRDSFI------G 171
Query: 945 VLGYRAPE--LAASKKPHP-SFKSDVYAFGVILLEL 977
+ APE + + K P +K+D+++ G+ L+E+
Sbjct: 172 TPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 37.4 bits (85), Expect = 0.047, Method: Composition-based stats.
Identities = 55/216 (25%), Positives = 87/216 (40%), Gaps = 28/216 (12%)
Query: 773 PEELSRAPAEVLGRSSHGTSYRA-TLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIRH 831
P E+ E LG + G Y+A E G K + ++ H
Sbjct: 17 PNEVWEIVGE-LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDH 75
Query: 832 PNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARG 891
P +V L G Y+ KL + PG + R LT Q + +
Sbjct: 76 PYIVKLLGAYY---HDGKLWIMIEFCPGGAVDAIMLELDRG---LTEPQIQVVCRQMLEA 129
Query: 892 LNYLHFDRAVPHGNLKATNIL--LDGPDLNARVADYC-----LHRLMTQAGTIEQILDAG 944
LN+LH R + H +LKA N+L L+G + R+AD+ L L + I G
Sbjct: 130 LNFLHSKRII-HRDLKAGNVLMTLEG---DIRLADFGVSAKNLKTLQKRDSFI------G 179
Query: 945 VLGYRAPE--LAASKKPHP-SFKSDVYAFGVILLEL 977
+ APE + + K P +K+D+++ G+ L+E+
Sbjct: 180 TPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 37.0 bits (84), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 17/160 (10%)
Query: 828 NIRHPNVVGLRG---YYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLK- 883
+ HPN++GLR ++ P H KL L + LA ++D+ P Q ++
Sbjct: 85 HFHHPNILGLRDIFVHFEEPAMH-KLYLVTELMRTDLAQVIHDQRIVISP-----QHIQY 138
Query: 884 IAVDVARGLNYLHFDRAVPHGNLKATNILL-DGPDLNARVADYCLHRLMTQAGTIEQILD 942
+ GL+ LH + V H +L NILL D D+ + D+ L R T +
Sbjct: 139 FMYHILLGLHVLH-EAGVVHRDLHPGNILLADNNDIT--ICDFNLAREDTADANKTHYVT 195
Query: 943 AGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGRC 982
YRAPEL K D+++ G ++ E+ +
Sbjct: 196 HR--WYRAPELVMQFKGFTKL-VDMWSAGCVMAEMFNRKA 232
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 37.0 bits (84), Expect = 0.063, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 882 LKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQIL 941
L I + +A + +LH + + H +LK +NI D+ +V D+ L M Q + +L
Sbjct: 167 LHIFIQIAEAVEFLH-SKGLMHRDLKPSNIFFTMDDV-VKVGDFGLVTAMDQDEEEQTVL 224
Query: 942 -----------DAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELL 978
G Y +PE + S K D+++ G+IL ELL
Sbjct: 225 TPMPAYATHXGQVGTKLYMSPEQIHGN--NYSHKVDIFSLGLILFELL 270
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 36.6 bits (83), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 17/160 (10%)
Query: 828 NIRHPNVVGLRG---YYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLK- 883
+ HPN++GLR ++ P H KL L + LA ++D+ P Q ++
Sbjct: 85 HFHHPNILGLRDIFVHFEEPAMH-KLYLVTELMRTDLAQVIHDQRIVISP-----QHIQY 138
Query: 884 IAVDVARGLNYLHFDRAVPHGNLKATNILL-DGPDLNARVADYCLHRLMTQAGTIEQILD 942
+ GL+ LH + V H +L NILL D D+ + D+ L R T +
Sbjct: 139 FMYHILLGLHVLH-EAGVVHRDLHPGNILLADNNDIT--ICDFNLAREDTADANKTHYVT 195
Query: 943 AGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGRC 982
YRAPEL K D+++ G ++ E+ +
Sbjct: 196 HR--WYRAPELVMQFKGFTKL-VDMWSAGCVMAEMFNRKA 232
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 36.6 bits (83), Expect = 0.071, Method: Composition-based stats.
Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 829 IRHPNVVG-LRGYYWGPTQHEKL-ILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAV 886
+RH N++G + G +L +++DY GSL +L K L LK+A
Sbjct: 88 MRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL------KSTTLDAKSMLKLAY 141
Query: 887 DVARGLNYLHFD-------RAVPHGNLKATNILLDGPDLNARVADYCLH-RLMTQAGTIE 938
GL +LH + A+ H +LK+ NIL+ + +AD L + ++ ++
Sbjct: 142 SSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVK-KNGTCCIADLGLAVKFISDTNEVD 200
Query: 939 QILDA--GVLGYRAPELAASKKPHPSFKS----DVYAFGVILLELLTGRCAGDVI 987
+ G Y PE+ F+S D+Y+FG+IL E+ +G ++
Sbjct: 201 IPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIV 255
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 36.6 bits (83), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%)
Query: 78 NLGLSAAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSG 137
NLG+ D+ + L L +L +S N + + P + SL L + ++ +
Sbjct: 162 NLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNA 221
Query: 138 IGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSF 178
L+SL+ L+L+ NN L D + L ++ + L+HN +
Sbjct: 222 FDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPW 262
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 23/111 (20%)
Query: 88 SVFSNLSMLVKLSMSNNSISGV-------IPD----NIGDFKSLEFLDVSD--------- 127
F LS L +L + NN I + +P ++G+ K LE++ +
Sbjct: 101 QAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRY 160
Query: 128 -NLFSSSLPS--GIGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSH 175
NL +L + L L+ L L+GN + P S GL S++ L L H
Sbjct: 161 LNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMH 211
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 36.6 bits (83), Expect = 0.072, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 26/205 (12%)
Query: 784 LGRSSHGTSYRAT-LENGMFLTVKWLR---EGVAKQRXXXXXXXXXXXNIRHPNVVGLRG 839
+GR YRA L +G+ + +K ++ AK R + HPNV+
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIK--- 96
Query: 840 YYWGPTQHEKL-ILSDYISPGSLASFL--YDRPGRKGPPLT-WAQRLKIAVDVARGLNYL 895
YY + +L I+ + G L+ + + + R P T W K V + L ++
Sbjct: 97 YYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVW----KYFVQLCSALEHM 152
Query: 896 HFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAA 955
H R V H ++K N+ + + ++ D L R + T L G Y +PE
Sbjct: 153 H-SRRVMHRDIKPANVFITATGV-VKLGDLGLGRFFSSKTTAAHSL-VGTPYYMSPE--- 206
Query: 956 SKKPHPS---FKSDVYAFGVILLEL 977
+ H + FKSD+++ G +L E+
Sbjct: 207 --RIHENGYNFKSDIWSLGCLLYEM 229
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 36.6 bits (83), Expect = 0.072, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 31/154 (20%)
Query: 846 QHEKLI-LSDYISPGSLASFLYD----RPGRK-------GPPLTWAQRLKIAVDVARGLN 893
QHE +I L D +P S YD P + G + + + + +GL
Sbjct: 81 QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLK 140
Query: 894 YLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGY----- 948
Y+H V H +LK N+ ++ D ++ D+ L R DA + GY
Sbjct: 141 YIH-SAGVVHRDLKPGNLAVN-EDCELKILDFGLARHA----------DAEMTGYVVTRW 188
Query: 949 -RAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
RAPE+ S H + D+++ G I+ E+LTG+
Sbjct: 189 YRAPEVILSWM-HYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 36.6 bits (83), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 13/165 (7%)
Query: 122 FLDVSDNLFSSSLPSGI-GKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSG 180
+LD+ N S LP+G+ +L SL L L GN L + L S+ L+LS N
Sbjct: 32 YLDLETNSLKS-LPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQ- 89
Query: 181 SLPPALTRXXXXXXXXXXXXGFSKRIPRG-FELILGLQVLDFHGNKLDGHLDGEFFLLTN 239
SLP + + +P G F+ + L+ L + N+L DG F LT+
Sbjct: 90 SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTS 149
Query: 240 ASHIDFSGNMFVGSSSQKFLPGLSQSVQYLNLSLNQLTGSLVNGG 284
+I N + + PG ++YL+ +N+ +G + N
Sbjct: 150 LQYIWLHDNPWDCTC-----PG----IRYLSEWINKHSGVVRNSA 185
Score = 33.1 bits (74), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 219 LDFHGNKLDGHLDGEFFLLTNASHIDFSGNMFVGSSSQKFLPGLSQSVQYLNLSLNQLTG 278
LD N L +G F LT+ + + GN + F S+ YLNLS NQL
Sbjct: 33 LDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVF--NKLTSLTYLNLSTNQLQ- 89
Query: 279 SLVNGGELQLFENLKVLDLSYNQLTGELPG-FNFVYELQVLKLSNNRF 325
SL NG +L + LK L L+ NQL G F+ + +L+ L+L N+
Sbjct: 90 SLPNGVFDKLTQ-LKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQL 136
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 36.6 bits (83), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 30/168 (17%)
Query: 830 RHPNVVGLRG--YYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPP------------ 875
+H N+V L G + GP L++++Y G L +FL RK PP
Sbjct: 108 QHENIVNLLGACTHGGPV----LVITEYCCYGDLLNFL----RRKRPPGLEYSYNPSHNP 159
Query: 876 ---LTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHR-LM 931
L+ L + VA+G+ +L + H ++ A N+LL + A++ D+ L R +M
Sbjct: 160 EEQLSSRDLLHFSSQVAQGMAFLASKNCI-HRDVAARNVLLTNGHV-AKIGDFGLARDIM 217
Query: 932 TQAGTIEQILDAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ I + + + APE + + +SDV+++G++L E+ +
Sbjct: 218 NDSNYIVKGNARLPVKWMAPE--SIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 36.6 bits (83), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 884 IAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDA 943
+ + +GL Y+H V H +LK N+ ++ D ++ D+ L R E
Sbjct: 149 LVYQMLKGLKYIH-SAGVVHRDLKPGNLAVN-EDCELKILDFGLAR----HADAEMTGYV 202
Query: 944 GVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ S H + D+++ G I+ E+LTG+
Sbjct: 203 VTRWYRAPEVILSWM-HYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 36.6 bits (83), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ D L R T
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILDGGLARHTDDEMTGY----VATRW 187
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 188 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 36.2 bits (82), Expect = 0.090, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 57/105 (54%), Gaps = 5/105 (4%)
Query: 876 LTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHR-LMTQA 934
LT+ L A VA+G+ +L F V H +L A N+L+ + ++ D+ L R +M+ +
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFKSCV-HRDLAARNVLVTHGKV-VKICDFGLARDIMSDS 226
Query: 935 GTIEQILDAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ + + + APE + + + KSDV+++G++L E+ +
Sbjct: 227 NYVVRGNARLPVKWMAPE--SLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 36.2 bits (82), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 6/133 (4%)
Query: 114 IGDFKSLEFLDVSDNLFSSSLPSGI-GKLESLQNLSLAGNNFSGLIPDSV-SGLVSIQSL 171
+ + +L +L ++ N S LP+G+ KL +L+ L L N L PD V L ++ L
Sbjct: 81 LKELTNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVENQLQSL-PDGVFDKLTNLTYL 138
Query: 172 DLSHNSFSGSLPPALTRXXXXXXXXXXXXGFSKRIPRG-FELILGLQVLDFHGNKLDGHL 230
L HN SLP + + +P G F+ + L+ L + N+L
Sbjct: 139 YLYHNQLQ-SLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKSVP 197
Query: 231 DGEFFLLTNASHI 243
DG F LT+ +HI
Sbjct: 198 DGVFDRLTSLTHI 210
Score = 30.8 bits (68), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Query: 62 NGIVCNGGNVAGVVLDNLGLSAAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLE 121
NG+ N+ +VL L + D VF L+ L L + +N + + +L
Sbjct: 102 NGVFDKLTNLKELVLVENQLQSLPD-GVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLT 160
Query: 122 FLDVSDNLFSSSLPSGI-GKLESLQNLSLAGNNFSGLIPDSV 162
LD+ +N S LP G+ KL L+ LSL N +PD V
Sbjct: 161 RLDLDNNQLQS-LPEGVFDKLTQLKQLSLNDNQLKS-VPDGV 200
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 36.2 bits (82), Expect = 0.097, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 16/97 (16%)
Query: 884 IAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDA 943
I V +Y+H ++ + H ++K +NIL+D N RV ++ G E ++D
Sbjct: 156 IIKSVLNSFSYIHNEKNICHRDVKPSNILMDK---NGRVK-------LSDFGESEYMVDK 205
Query: 944 GVLGYRA------PELAASKKPHPSFKSDVYAFGVIL 974
+ G R PE +++ + K D+++ G+ L
Sbjct: 206 KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ RGL Y+H + H +LK +N+ ++ D ++ + L R T
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVN-EDCELKILGFGLARHTDDEMTGY----VATRW 187
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
YRAPE+ + H + D+++ G I+ ELLTGR
Sbjct: 188 YRAPEIMLNWM-HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%)
Query: 78 NLGLSAAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSG 137
NLG+ D+ + L L +L +S N + + P + SL L + ++ +
Sbjct: 162 NLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNA 221
Query: 138 IGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSF 178
L+SL+ L+L+ NN L D + L ++ + L+HN +
Sbjct: 222 FDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPW 262
Score = 31.2 bits (69), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 90 FSNLSMLVKLSMSNNSISGV-------IPD----NIGDFKSLEFLDVSD----------N 128
F LS L +L + NN I + +P ++G+ K LE++ + N
Sbjct: 103 FEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLN 162
Query: 129 LFSSSLPS--GIGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSH 175
L +L + L L+ L L+GN + P S GL S++ L L H
Sbjct: 163 LGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMH 211
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 32/175 (18%)
Query: 828 NIRHPNVVGLRGYYW--GPTQHEKLILSDYISPGSLASFLYDRPGRKGPP---------- 875
+ HP+V+ L G GP L++ +Y GSL FL R RK P
Sbjct: 82 QVNHPHVIKLYGACSQDGPL----LLIVEYAKYGSLRGFL--RESRKVGPGYLGSGGSRN 135
Query: 876 -----------LTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVAD 924
LT + A +++G+ YL + ++ H +L A NIL+ +++D
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLA-EMSLVHRDLAARNILV-AEGRKMKISD 193
Query: 925 YCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ L R + + + + G + + + + + +SDV++FGV+L E++T
Sbjct: 194 FGLSRDVYEEDSXVK-RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 881 RLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY--CLHRLMTQAGTIE 938
+ +A+D L+Y+H D +K N+LLD + + R+AD+ CL M GT++
Sbjct: 199 EMVLAIDSIHQLHYVHRD-------IKPDNVLLD-VNGHIRLADFGSCLK--MNDDGTVQ 248
Query: 939 QILDAGVLGYRAPE-LAASKKPHPSF--KSDVYAFGVILLELLTGR 981
+ G Y +PE L A + + + D ++ GV + E+L G
Sbjct: 249 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 35.8 bits (81), Expect = 0.13, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 15/108 (13%)
Query: 882 LKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQIL 941
L I + +A + +LH + + H +LK +NI D+ +V D+ L M Q + +L
Sbjct: 121 LHIFLQIAEAVEFLH-SKGLMHRDLKPSNIFFTMDDV-VKVGDFGLVTAMDQDEEEQTVL 178
Query: 942 -----------DAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELL 978
G Y +PE S K D+++ G+IL ELL
Sbjct: 179 TPMPAYARHTGQVGTKLYMSPEQIHGNSY--SHKVDIFSLGLILFELL 224
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 30/174 (17%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLIL-SDYISPGSLASFLYDRPGRKGPP----------- 875
+ HP+V+ L G +Q L+L +Y GSL FL R RK P
Sbjct: 82 QVNHPHVIKLYG---ACSQDGPLLLIVEYAKYGSLRGFL--RESRKVGPGYLGSGGSRNS 136
Query: 876 ----------LTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY 925
LT + A +++G+ YL + V H +L A NIL+ +++D+
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLV-HRDLAARNILV-AEGRKMKISDF 194
Query: 926 CLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
L R + + + + G + + + + + +SDV++FGV+L E++T
Sbjct: 195 GLSRDVYEEDSYVK-RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 32/175 (18%)
Query: 828 NIRHPNVVGLRGYYW--GPTQHEKLILSDYISPGSLASFLYDRPGRKGPP---------- 875
+ HP+V+ L G GP L++ +Y GSL FL R RK P
Sbjct: 82 QVNHPHVIKLYGACSQDGPL----LLIVEYAKYGSLRGFL--RESRKVGPGYLGSGGSRN 135
Query: 876 -----------LTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVAD 924
LT + A +++G+ YL + V H +L A NIL+ +++D
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLV-HRDLAARNILV-AEGRKMKISD 193
Query: 925 YCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ L R + + + + G + + + + + +SDV++FGV+L E++T
Sbjct: 194 FGLSRDVYEEDSXVK-RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 881 RLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY--CLHRLMTQAGTIE 938
+ +A+D L+Y+H D +K N+LLD + + R+AD+ CL M GT++
Sbjct: 183 EMVLAIDSIHQLHYVHRD-------IKPDNVLLD-VNGHIRLADFGSCLK--MNDDGTVQ 232
Query: 939 QILDAGVLGYRAPE-LAASKKPHPSF--KSDVYAFGVILLELLTGR 981
+ G Y +PE L A + + + D ++ GV + E+L G
Sbjct: 233 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|1WWL|A Chain A, Crystal Structure Of Cd14
pdb|1WWL|B Chain B, Crystal Structure Of Cd14
Length = 312
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 62/150 (41%), Gaps = 13/150 (8%)
Query: 112 DNIGDFKSLEFLDVSDN-------LFSSSLPSGIGKLESLQNLSLAGNNFSGLIPDSVSG 164
+ + F +L LD+SDN L S+ P L+ L + SG+ +
Sbjct: 167 EQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAA 226
Query: 165 LVSIQSLDLSHNSFSGSL-PPALTRXXXXXXXXXXXXGFSKRIPRGFELILGLQVLDFHG 223
V +Q LDLSHNS + P+ G K++P+G L L VLD
Sbjct: 227 RVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGL-KQVPKG--LPAKLSVLDLSY 283
Query: 224 NKLDGHLDGEFFLLTNASHIDFSGNMFVGS 253
N+LD + + L ++ GN F+ S
Sbjct: 284 NRLDRNPSPDE--LPQVGNLSLKGNPFLDS 311
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 35.4 bits (80), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 61/150 (40%), Gaps = 8/150 (5%)
Query: 78 NLGLSAAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSG 137
NL + L V L +L L +S+N + +P +L LDVS N +S
Sbjct: 61 NLDRAELTKLQVDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGA 119
Query: 138 IGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXXX 197
+ L LQ L L GN L P ++ ++ L L++N+ + LP L
Sbjct: 120 LRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLL 178
Query: 198 XXXGFSKRIPRGFELILGLQVLDF---HGN 224
IP+GF G +L F HGN
Sbjct: 179 LQENSLYTIPKGF---FGSHLLPFAFLHGN 205
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 35.4 bits (80), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 61/150 (40%), Gaps = 8/150 (5%)
Query: 78 NLGLSAAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSG 137
NL + L V L +L L +S+N + +P +L LDVS N +S
Sbjct: 61 NLDRAELTKLQVDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGA 119
Query: 138 IGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXXX 197
+ L LQ L L GN L P ++ ++ L L++N+ + LP L
Sbjct: 120 LRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLL 178
Query: 198 XXXGFSKRIPRGFELILGLQVLDF---HGN 224
IP+GF G +L F HGN
Sbjct: 179 LQENSLYTIPKGF---FGSHLLPFAFLHGN 205
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 35.4 bits (80), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 26/165 (15%)
Query: 830 RHPNVVGLRG--YYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
+H N+V L G + GP L++++Y G L +FL RK L IA
Sbjct: 108 QHENIVNLLGACTHGGPV----LVITEYCCYGDLLNFL----RRKSRVLETDPAFAIANS 159
Query: 888 VARGLNYLHFDRAVP------------HGNLKATNILLDGPDLNARVADYCLHR-LMTQA 934
A + LHF V H ++ A N+LL + A++ D+ L R +M +
Sbjct: 160 TASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV-AKIGDFGLARDIMNDS 218
Query: 935 GTIEQILDAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
I + + + APE + + +SDV+++G++L E+ +
Sbjct: 219 NYIVKGNARLPVKWMAPE--SIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 59/150 (39%), Gaps = 8/150 (5%)
Query: 78 NLGLSAAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSG 137
NL L V L +L L +S+N + +P +L LDVS N +S
Sbjct: 61 NLDRCELTKLQVDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGA 119
Query: 138 IGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXXX 197
+ L LQ L L GN L P ++ ++ L L++N + LP L
Sbjct: 120 LRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLL 178
Query: 198 XXXGFSKRIPRGFELILGLQVLDF---HGN 224
IP+GF G +L F HGN
Sbjct: 179 LQENSLYTIPKGF---FGSHLLPFAFLHGN 205
Score = 29.6 bits (65), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 499 SVSNLQVLDLSHNRLNGYFPDRLGSLTGLKVLCLAGNNISGSLPTSMANMTSLSSLVISQ 558
++ L VLD+S NRL L L L+ L L GN + P + L L ++
Sbjct: 98 TLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLAN 157
Query: 559 NHFTGPLPNNLPNSLETFNV 578
N T LP L N LE +
Sbjct: 158 NQLTE-LPAGLLNGLENLDT 176
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 61/150 (40%), Gaps = 8/150 (5%)
Query: 78 NLGLSAAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSG 137
NL + L V L +L L +S+N + +P +L LDVS N +S
Sbjct: 61 NLDRAELTKLQVDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGA 119
Query: 138 IGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXXX 197
+ L LQ L L GN L P ++ ++ L L++N+ + LP L
Sbjct: 120 LRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLL 178
Query: 198 XXXGFSKRIPRGFELILGLQVLDF---HGN 224
IP+GF G +L F HGN
Sbjct: 179 LQENSLYTIPKGF---FGSHLLPFAFLHGN 205
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 15/148 (10%)
Query: 882 LKIAVDVARGLNYLHFDRAVPHGNLKATNILL--DGPDLNARVADYCLHRLMTQAGTIEQ 939
L++ + + L Y+H + V HG++KA N+LL PD +ADY L G +Q
Sbjct: 154 LQLGIRMLDVLEYIHENEYV-HGDIKAANLLLGYKNPD-QVYLADYGLSYRYCPNGNHKQ 211
Query: 940 ILDAGVLGYRA----PELAASKKPHPSFKSDVYAFGVILLELLTGRCA-----GDVISGE 990
+ G+ L A K S +SDV G +L L G+ D ++ +
Sbjct: 212 YQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQ 271
Query: 991 GAGVDLTDWMQLKVAEG--HGSDCFDAA 1016
A +L D + V + GS C + A
Sbjct: 272 TAKTNLLDELPQSVLKWAPSGSSCCEIA 299
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 52 IDFDGCP--------SSWNGIVCNGGNVAGVVLDNLGL---SAAADLSVFSNLSMLVKLS 100
++FD C +S N V + G V + + L + DLS +L+ VK
Sbjct: 256 LEFDDCTLNGVGNFRASDNDRVIDPGKVETLTIRRLHIPRFYLFYDLSTLYSLTERVKRI 315
Query: 101 MSNNSISGVIPDNIGD-FKSLEFLDVSDNLFSSSLPSGIGKLE---SLQNLSLAGNNFSG 156
NS ++P + KSLE+LD+S+NL + SLQ L L N+ +
Sbjct: 316 TVENSKVFLVPCLLSQHLKSLEYLDLSENLMVEEYLKNSACEDAWPSLQTLILRQNHLAS 375
Query: 157 LIP--DSVSGLVSIQSLDLSHNSF 178
L +++ L ++ ++D+S NSF
Sbjct: 376 LEKTGETLLTLKNLTNIDISKNSF 399
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 118 KSLEFLDVSDNLFSSSLPSGIGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNS 177
++++ LD+S+N + S + + +LQ L L N + + DS S L S++ LDLS+N
Sbjct: 26 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNY 85
Query: 178 FSG 180
S
Sbjct: 86 LSN 88
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 85 ADLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESL 144
+DL NL LV +++N I+ + D+ SLE LD+S N S+ S L SL
Sbjct: 44 SDLQRCVNLQALV---LTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSL 100
Query: 145 QNLSLAGNNFSGLIPDSV-SGLVSIQSL 171
L+L GN + L S+ S L +Q L
Sbjct: 101 TFLNLLGNPYKTLGETSLFSHLTKLQIL 128
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 59/150 (39%), Gaps = 8/150 (5%)
Query: 78 NLGLSAAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSG 137
NL L V L +L L +S+N + +P +L LDVS N +S
Sbjct: 61 NLDRCELTKLQVDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGA 119
Query: 138 IGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXXX 197
+ L LQ L L GN L P ++ ++ L L++N + LP L
Sbjct: 120 LRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLL 178
Query: 198 XXXGFSKRIPRGFELILGLQVLDF---HGN 224
IP+GF G +L F HGN
Sbjct: 179 LQENSLYTIPKGF---FGSHLLPFAFLHGN 205
Score = 29.6 bits (65), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 499 SVSNLQVLDLSHNRLNGYFPDRLGSLTGLKVLCLAGNNISGSLPTSMANMTSLSSLVISQ 558
++ L VLD+S NRL L L L+ L L GN + P + L L ++
Sbjct: 98 TLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLAN 157
Query: 559 NHFTGPLPNNLPNSLETFNV 578
N T LP L N LE +
Sbjct: 158 NQLTE-LPAGLLNGLENLDT 176
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 62/151 (41%), Gaps = 10/151 (6%)
Query: 78 NLGLSAAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSG 137
NL L V L +L L +S+N + +P +L LDVS N +S LP G
Sbjct: 61 NLDRCELTKLQVDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTS-LPLG 118
Query: 138 IGK-LESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXX 196
+ L LQ L L GN L P ++ ++ L L++N + LP L
Sbjct: 119 ALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTL 177
Query: 197 XXXXGFSKRIPRGFELILGLQVLDF---HGN 224
IP+GF G +L F HGN
Sbjct: 178 LLQENSLYTIPKGF---FGSHLLPFAFLHGN 205
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 35.0 bits (79), Expect = 0.22, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 14/104 (13%)
Query: 884 IAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYC----LHRLMTQAGTIEQ 939
I ++ RGL++LH + + H ++K N+LL + ++ D+ L R + + T
Sbjct: 134 ICREILRGLSHLHQHKVI-HRDIKGQNVLLT-ENAEVKLVDFGVSAQLDRTVGRRNTF-- 189
Query: 940 ILDAGVLGYRAPE-LAASKKPHPS--FKSDVYAFGVILLELLTG 980
G + APE +A + P + FKSD+++ G+ +E+ G
Sbjct: 190 ---IGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 60/150 (40%), Gaps = 8/150 (5%)
Query: 78 NLGLSAAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSG 137
NL L V L +L L +S+N + +P +L LDVS N +S
Sbjct: 62 NLDRCELTKLQVDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGA 120
Query: 138 IGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXXX 197
+ L LQ L L GN L P ++ ++ L L++N+ + LP L
Sbjct: 121 LRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLL 179
Query: 198 XXXGFSKRIPRGFELILGLQVLDF---HGN 224
IP+GF G +L F HGN
Sbjct: 180 LQENSLYTIPKGF---FGSHLLPFAFLHGN 206
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 35.0 bits (79), Expect = 0.23, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDA----GVL 946
GL YLH R + HG++KA N+LL A + D+ + G + +L G
Sbjct: 178 GLEYLH-TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTE 236
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
+ APE+ K K D+++ ++L +L G
Sbjct: 237 THMAPEVVMGKPCDA--KVDIWSSCCMMLHMLNG 268
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 35.0 bits (79), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 943 AGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
AG G+RAPE+ +K P+ + D+++ GVI L LL+GR
Sbjct: 207 AGTPGFRAPEVL-TKCPNQTTAIDMWSAGVIFLSLLSGR 244
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 35.0 bits (79), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDA----GVL 946
GL YLH R + HG++KA N+LL +A + D+ + G + +L G
Sbjct: 197 GLEYLH-SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTE 255
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
+ APE+ + K DV++ ++L +L G
Sbjct: 256 THMAPEVVLGRS--CDAKVDVWSSCCMMLHMLNG 287
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 35.0 bits (79), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 59/150 (39%), Gaps = 8/150 (5%)
Query: 78 NLGLSAAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSG 137
NL L V L +L L +S+N + +P +L LDVS N +S
Sbjct: 61 NLDRCELTKLQVDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGA 119
Query: 138 IGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXXX 197
+ L LQ L L GN L P ++ ++ L L++N + LP L
Sbjct: 120 LRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNDLT-ELPAGLLNGLENLDTLL 178
Query: 198 XXXGFSKRIPRGFELILGLQVLDF---HGN 224
IP+GF G +L F HGN
Sbjct: 179 LQENSLYTIPKGF---FGSHLLPFAFLHGN 205
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 35.0 bits (79), Expect = 0.24, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDA----GVL 946
GL YLH R + HG++KA N+LL A + D+ + G + +L G
Sbjct: 162 GLEYLH-TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTE 220
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
+ APE+ K K D+++ ++L +L G
Sbjct: 221 THMAPEVVMGKPCDA--KVDIWSSCCMMLHMLNG 252
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 35.0 bits (79), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 455 LRVLDLSFNHLDGPFL--TNLLNSSTLQELHLADNLLTGVLDFSP-PSVSNLQVLDLSHN 511
LR LDLSFN G + N + LQ L + L V +FS S+ L LD+S+
Sbjct: 378 LRHLDLSFN---GAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYT 434
Query: 512 RLNGYFPDRLGSLTGLKVLCLAGNNIS-GSLPTSMANMTSLSSLVISQ 558
F LT L L +AGN+ +L AN T+L+ L +S+
Sbjct: 435 NTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSK 482
Score = 30.8 bits (68), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 11/136 (8%)
Query: 453 QKLRVLDLSFNHLDGPFLTNLLNSSTLQELHLA-----DNLLTGVLDFSPPSVSNLQVLD 507
+KL LD+S+ + F L ++L L +A DN L+ V + +NL LD
Sbjct: 424 EKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVF----ANTTNLTFLD 479
Query: 508 LSHNRLNGYFPDRLGSLTGLKVLCLAGNNISGSLPTSMANMTSLSSLVISQNHFTGP--L 565
LS +L +L L++L ++ NN+ + + SLS+L S N +
Sbjct: 480 LSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGI 539
Query: 566 PNNLPNSLETFNVSYN 581
+ P SL FN++ N
Sbjct: 540 LQHFPKSLAFFNLTNN 555
Score = 30.0 bits (66), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 141 LESLQNLSLAGN--NFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXXXX 198
L SL L L+ N +FSG S G S++ LDL SF+G++ +
Sbjct: 349 LPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDL---SFNGAIIMSANFMGLEELQHLD 405
Query: 199 XXGFSKRIPRGFELILGLQVL-----DFHGNKLDGHLDGEFFLLTNASHIDFSGNMFVGS 253
+ + F L L+ L + K+D DG F LT+ + + +GN F +
Sbjct: 406 FQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKID--FDGIFLGLTSLNTLKMAGNSFKDN 463
Query: 254 SSQKFLPGLSQSVQYLNLSLNQLTGSLVNGGELQLFENLKVLDLSYNQLTG-ELPGFNFV 312
+ + ++ +L+LS QL ++ G L++L++S+N L + +N +
Sbjct: 464 TLSNVFAN-TTNLTFLDLSKCQLEQ--ISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQL 520
Query: 313 YELQVLKLSNNR 324
Y L L S NR
Sbjct: 521 YSLSTLDCSFNR 532
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 35.0 bits (79), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 62/151 (41%), Gaps = 10/151 (6%)
Query: 78 NLGLSAAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSG 137
NL L V L +L L +S+N + +P +L LDVS N +S LP G
Sbjct: 61 NLDRCELTKLQVDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTS-LPLG 118
Query: 138 IGK-LESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXX 196
+ L LQ L L GN L P ++ ++ L L++N + LP L
Sbjct: 119 ALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTL 177
Query: 197 XXXXGFSKRIPRGFELILGLQVLDF---HGN 224
IP+GF G +L F HGN
Sbjct: 178 LLQENSLYTIPKGF---FGSHLLPFAFLHGN 205
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 35.0 bits (79), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 455 LRVLDLSFNHLDGPFL--TNLLNSSTLQELHLADNLLTGVLDFSP-PSVSNLQVLDLSHN 511
LR LDLSFN G + N + LQ L + L V +FS S+ L LD+S+
Sbjct: 373 LRHLDLSFN---GAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYT 429
Query: 512 RLNGYFPDRLGSLTGLKVLCLAGNNIS-GSLPTSMANMTSLSSLVISQ 558
F LT L L +AGN+ +L AN T+L+ L +S+
Sbjct: 430 NTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSK 477
Score = 30.8 bits (68), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 11/136 (8%)
Query: 453 QKLRVLDLSFNHLDGPFLTNLLNSSTLQELHLA-----DNLLTGVLDFSPPSVSNLQVLD 507
+KL LD+S+ + F L ++L L +A DN L+ V + +NL LD
Sbjct: 419 EKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVF----ANTTNLTFLD 474
Query: 508 LSHNRLNGYFPDRLGSLTGLKVLCLAGNNISGSLPTSMANMTSLSSLVISQNHFTGP--L 565
LS +L +L L++L ++ NN+ + + SLS+L S N +
Sbjct: 475 LSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGI 534
Query: 566 PNNLPNSLETFNVSYN 581
+ P SL FN++ N
Sbjct: 535 LQHFPKSLAFFNLTNN 550
Score = 29.6 bits (65), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 141 LESLQNLSLAGN--NFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXXXX 198
L SL L L+ N +FSG S G S++ LDL SF+G++ +
Sbjct: 344 LPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDL---SFNGAIIMSANFMGLEELQHLD 400
Query: 199 XXGFSKRIPRGFELILGLQVL-----DFHGNKLDGHLDGEFFLLTNASHIDFSGNMFVGS 253
+ + F L L+ L + K+D DG F LT+ + + +GN F +
Sbjct: 401 FQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKID--FDGIFLGLTSLNTLKMAGNSFKDN 458
Query: 254 SSQKFLPGLSQSVQYLNLSLNQLTGSLVNGGELQLFENLKVLDLSYNQLTG-ELPGFNFV 312
+ + ++ +L+LS QL ++ G L++L++S+N L + +N +
Sbjct: 459 TLSNVFAN-TTNLTFLDLSKCQLEQ--ISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQL 515
Query: 313 YELQVLKLSNNR 324
Y L L S NR
Sbjct: 516 YSLSTLDCSFNR 527
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Query: 86 DLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGI-GKLESL 144
D F+ + KL M N+I + P + L L + N SS LP GI L
Sbjct: 91 DTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSS-LPRGIFHNTPKL 149
Query: 145 QNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSG---SLPPAL 186
LS++ NN + D+ S+Q+L LS N + SL P+L
Sbjct: 150 TTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSL 194
Score = 33.9 bits (76), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 449 IIQYQKLRVLDLSFNHLDGPFLTNLLNSSTLQELHLADNLLTGVLDFSPPSVSNLQVLDL 508
++ Y L +DLS+N L+ + L+ L++++N L + + P + L+VLDL
Sbjct: 250 LLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQP-IPTLKVLDL 308
Query: 509 SHNRL 513
SHN L
Sbjct: 309 SHNHL 313
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 88/218 (40%), Gaps = 50/218 (22%)
Query: 89 VFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNLS 148
+F N L LSMSNN++ + D SL+ L +S N + + + SL + +
Sbjct: 142 IFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHAN 198
Query: 149 LAGNNFSGL-IPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXXXXXXGFSKRIP 207
++ N S L IP ++++ LD SHNS + R P
Sbjct: 199 VSYNLLSTLAIP------IAVEELDASHNSINVV-----------------------RGP 229
Query: 208 RGFEL-ILGLQVLDFHGNKLDGHLDGEFFLLT--NASHIDFSGNMFVGSSSQKFLPGLSQ 264
EL IL LQ H N D +LL +D S N F+ Q
Sbjct: 230 VNVELTILKLQ----HNNLTDT-----AWLLNYPGLVEVDLSYNELEKIMYHPFVKM--Q 278
Query: 265 SVQYLNLSLNQLTGSLVNGGELQLFENLKVLDLSYNQL 302
++ L +S N+L + G Q LKVLDLS+N L
Sbjct: 279 RLERLYISNNRLVALNLYG---QPIPTLKVLDLSHNHL 313
>pdb|2V70|A Chain A, Third Lrr Domain Of Human Slit2
pdb|2V70|B Chain B, Third Lrr Domain Of Human Slit2
pdb|2V70|C Chain C, Third Lrr Domain Of Human Slit2
pdb|2V70|D Chain D, Third Lrr Domain Of Human Slit2
Length = 220
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 48/116 (41%)
Query: 71 VAGVVLDNLGLSAAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLF 130
A + L+N + +F L L K++ SNN I+ + + + ++ N
Sbjct: 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRL 93
Query: 131 SSSLPSGIGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPAL 186
+ LESL+ L L N + + DS GL S++ L L N + P A
Sbjct: 94 ENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAF 149
Score = 30.8 bits (68), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 59/150 (39%), Gaps = 7/150 (4%)
Query: 415 NHLTGSIPEETPQF---LRXXXXXXXXXXXXXXXPKVIIQYQKLRVLDLSFNHLDGPFLT 471
N IPE PQ+ LR K+ +LR ++ S N +
Sbjct: 20 NQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKL----PQLRKINFSNNKITDIEEG 75
Query: 472 NLLNSSTLQELHLADNLLTGVLDFSPPSVSNLQVLDLSHNRLNGYFPDRLGSLTGLKVLC 531
+S + E+ L N L V + +L+ L L NR+ D L+ +++L
Sbjct: 76 AFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLS 135
Query: 532 LAGNNISGSLPTSMANMTSLSSLVISQNHF 561
L N I+ P + + SLS+L + N F
Sbjct: 136 LYDNQITTVAPGAFDTLHSLSTLNLLANPF 165
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDA----GVL 946
GL YLH R + HG++KA N+LL +A + D+ + G + +L G
Sbjct: 178 GLEYLH-SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTE 236
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
+ APE+ + K DV++ ++L +L G
Sbjct: 237 THMAPEVVLGRS--CDAKVDVWSSCCMMLHMLNG 268
>pdb|2V9T|B Chain B, Complex Between The Second Lrr Domain Of Slit2 And The
First Ig Domain From Robo1
Length = 220
Score = 34.7 bits (78), Expect = 0.27, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 96 LVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNLSLAGNNFS 155
+ ++ + N+I + P +K L +D+S+N S P L SL +L L GN +
Sbjct: 34 ITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 93
Query: 156 GLIPDSV 162
L P S+
Sbjct: 94 EL-PKSL 99
Score = 32.7 bits (73), Expect = 0.99, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 471 TNLLNSSTLQELHLADNLLTGVLDFSPPSVSNLQVLDLSHNRLNGYFPDRLGSLTGLKVL 530
TNL T+ E+ L N + + + L+ +DLS+N+++ PD L L L
Sbjct: 28 TNL--PETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 85
Query: 531 CLAGNNISGSLPTSM 545
L GN I+ LP S+
Sbjct: 86 VLYGNKIT-ELPKSL 99
Score = 30.8 bits (68), Expect = 4.4, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 26/114 (22%)
Query: 90 FSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGK--------- 140
FS L ++ +SNN IS + PD +SL L + N + LP + +
Sbjct: 52 FSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI-TELPKSLFEGLFSLQLLL 110
Query: 141 ----------------LESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSF 178
L +L LSL N + + S L +IQ++ L+ N F
Sbjct: 111 LNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 34.7 bits (78), Expect = 0.27, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDA----GVL 946
GL YLH R + HG++KA N+LL A + D+ + G + +L G
Sbjct: 176 GLEYLH-TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTE 234
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
+ APE+ K K D+++ ++L +L G
Sbjct: 235 THMAPEVVMGKPCDA--KVDIWSSCCMMLHMLNG 266
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 60/150 (40%), Gaps = 8/150 (5%)
Query: 78 NLGLSAAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSG 137
NL L V L +L L +S+N + +P +L LDVS N +S
Sbjct: 61 NLDRCELTKLQVDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGA 119
Query: 138 IGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXXX 197
+ L LQ L L GN L P ++ ++ L L++N+ + LP L
Sbjct: 120 LRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLL 178
Query: 198 XXXGFSKRIPRGFELILGLQVLDF---HGN 224
IP+GF G +L F HGN
Sbjct: 179 LQENSLYTIPKGF---FGSHLLPFAFLHGN 205
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 25/212 (11%)
Query: 774 EELSRAPAEVLGRSSHGTS---YRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIR 830
EEL + V+ R H T+ + A + N L+ + ++ + R ++
Sbjct: 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR--------KLQ 86
Query: 831 HPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVAR 890
HPN+V L + H ++ D ++ G L + R + A +
Sbjct: 87 HPNIVRLHDSIQEESFH--YLVFDLVTGGELFEDIVAREF-----YSEADASHCIQQILE 139
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNA--RVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ Y H + + H NLK N+LL A ++AD+ L + + AG GY
Sbjct: 140 SIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF--AGTPGY 196
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
+PE+ KK S D++A GVIL LL G
Sbjct: 197 LSPEVL--KKDPYSKPVDIWACGVILYILLVG 226
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 89/210 (42%), Gaps = 22/210 (10%)
Query: 782 EVLGRSSHGTSYRATL----ENGMFLTVKWLREGVAKQRXXXXXXXXXXXNI-----RHP 832
+VLG ++G + + G +K L++ Q+ + + P
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 833 NVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAV-DVARG 891
+V L +Y T+ + ++ DYI+ G L + L R ++I V ++
Sbjct: 120 FLVTL--HYAFQTETKLHLILDYINGGELFTHLSQRERFT------EHEVQIYVGEIVLA 171
Query: 892 LNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILD-AGVLGYRA 950
L +LH + + ++K NILLD + + + D+ L + A E+ D G + Y A
Sbjct: 172 LEHLH-KLGIIYRDIKLENILLDS-NGHVVLTDFGLSKEFV-ADETERAYDFCGTIEYMA 228
Query: 951 PELAASKKPHPSFKSDVYAFGVILLELLTG 980
P++ D ++ GV++ ELLTG
Sbjct: 229 PDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|2V9S|A Chain A, Second Lrr Domain Of Human Slit2
pdb|2V9S|B Chain B, Second Lrr Domain Of Human Slit2
pdb|2V9S|C Chain C, Second Lrr Domain Of Human Slit2
pdb|2V9S|D Chain D, Second Lrr Domain Of Human Slit2
Length = 220
Score = 34.7 bits (78), Expect = 0.29, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 96 LVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNLSLAGNNFS 155
+ ++ + N+I + P +K L +D+S+N S P L SL +L L GN +
Sbjct: 34 ITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 93
Query: 156 GL 157
L
Sbjct: 94 EL 95
Score = 32.7 bits (73), Expect = 1.1, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 471 TNLLNSSTLQELHLADNLLTGVLDFSPPSVSNLQVLDLSHNRLNGYFPDRLGSLTGLKVL 530
TNL T+ E+ L N + + + L+ +DLS+N+++ PD L L L
Sbjct: 28 TNL--PETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 85
Query: 531 CLAGNNISGSLPTSM 545
L GN I+ LP S+
Sbjct: 86 VLYGNKIT-ELPKSL 99
Score = 30.4 bits (67), Expect = 4.9, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 26/114 (22%)
Query: 90 FSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGK--------- 140
FS L ++ +SNN IS + PD +SL L + N + LP + +
Sbjct: 52 FSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI-TELPKSLFEGLFSLQLLL 110
Query: 141 ----------------LESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSF 178
L +L LSL N + + S L +IQ++ L+ N F
Sbjct: 111 LNANKINXLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 34.3 bits (77), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV-- 945
V+ G+ YL ++ H NL A N+LL A+++D+ L + + + AG
Sbjct: 445 VSMGMKYLE-EKNFVHRNLAARNVLLVNRHY-AKISDFGLSKALGADDSYYTARSAGKWP 502
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
L + APE +K S +SDV+++GV + E L+
Sbjct: 503 LKWYAPECINFRKF--SSRSDVWSYGVTMWEALS 534
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 830 RHPNVVGLRG--YYWGPTQHEKLILSDYISPGSLASFLYDR-------PGRKGPPLTWAQ 880
+H N+V L G + GP L++++Y G L +FL + P T +
Sbjct: 108 QHENIVNLLGACTHGGPV----LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLST 163
Query: 881 R--LKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHR-LMTQAGTI 937
R L + VA+G+ +L + H ++ A N+LL + A++ D+ L R +M + I
Sbjct: 164 RDLLHFSSQVAQGMAFLASKNCI-HRDVAARNVLLTNGHV-AKIGDFGLARDIMNDSNYI 221
Query: 938 EQILDAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+ + + APE + + +SDV+++G++L E+ +
Sbjct: 222 VKGNARLPVKWMAPE--SIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2XOT|A Chain A, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
pdb|2XOT|B Chain B, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
Length = 361
Score = 33.9 bits (76), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 65/149 (43%), Gaps = 12/149 (8%)
Query: 457 VLDLSFNHLDGPFLTNLLNSSTLQELH---LADNLLTGVLDFSPPSVSNLQVLDLSHNRL 513
+LDLS N+L L + L LH L+ N L + + V NL+ LDLS N L
Sbjct: 43 LLDLSHNNLSR--LRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHL 100
Query: 514 NGYFPDRLGSLTGLKVLCLAGNNISGSLPTSMANMTSLSSLVISQNHFTG-PLP-----N 567
+ L L+VL L N+I + +M L L +SQN + P+ N
Sbjct: 101 HTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGN 160
Query: 568 NLPNSLETFNVSYNDFSGAVPENLRKFPS 596
LP L ++S N +L+K P+
Sbjct: 161 KLP-KLMLLDLSSNKLKKLPLTDLQKLPA 188
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 33.9 bits (76), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Query: 86 DLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGI-GKLESL 144
D F+ + KL M N+I + P + L L + N SS LP GI L
Sbjct: 85 DTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSS-LPRGIFHNTPKL 143
Query: 145 QNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSG---SLPPAL 186
LS++ NN + D+ S+Q+L LS N + SL P+L
Sbjct: 144 TTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSL 188
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 449 IIQYQKLRVLDLSFNHLDGPFLTNLLNSSTLQELHLADNLLTGVLDFSPPSVSNLQVLDL 508
++ Y L +DLS+N L+ + L+ L++++N L + + P + L+VLDL
Sbjct: 244 LLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQP-IPTLKVLDL 302
Query: 509 SHNRL 513
SHN L
Sbjct: 303 SHNHL 307
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 85/216 (39%), Gaps = 46/216 (21%)
Query: 89 VFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNLS 148
+F N L LSMSNN++ + D SL+ L +S N + + + SL + +
Sbjct: 136 IFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHAN 192
Query: 149 LAGNNFSGL-IPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXXXXXXGFSKRIP 207
++ N S L IP ++++ LD SHNS + R P
Sbjct: 193 VSYNLLSTLAIP------IAVEELDASHNSINVV-----------------------RGP 223
Query: 208 RGFEL-ILGLQVLDFHGNKLDGHLDGEFFLLTNASHIDFSGNMFVGSSSQKFLPGLSQSV 266
EL IL LQ H N D +D S N F+ Q +
Sbjct: 224 VNVELTILKLQ----HNNLTDT---AWLLNYPGLVEVDLSYNELEKIMYHPFVKM--QRL 274
Query: 267 QYLNLSLNQLTGSLVNGGELQLFENLKVLDLSYNQL 302
+ L +S N+L + G Q LKVLDLS+N L
Sbjct: 275 ERLYISNNRLVALNLYG---QPIPTLKVLDLSHNHL 307
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 33.9 bits (76), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 60/153 (39%), Gaps = 5/153 (3%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
+RH NV+ L + + + ++ +Y G + L P ++ P Q
Sbjct: 62 RLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFP---VCQAHGYFCQ 117
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLG 947
+ GL YLH + + H ++K N+LL A L A G
Sbjct: 118 LIDGLEYLH-SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPA 176
Query: 948 YRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
++ PE+A FK D+++ GV L + TG
Sbjct: 177 FQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 33.5 bits (75), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 474 LNSSTLQELHLADN--LLTGVLDFSPPSVSNLQVLDLSHNRLNGYFPDRLGSLTGLKVLC 531
L+++++Q L LA+N L T FS +NL LDLS+N L+ L L+ L
Sbjct: 219 LSNTSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLS 278
Query: 532 LAGNNISGSLPTSMANMTSLSSLVISQ 558
L NNI P S +++L L + +
Sbjct: 279 LEYNNIQRLSPRSFYGLSNLRYLSLKR 305
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 100/244 (40%), Gaps = 53/244 (21%)
Query: 90 FSNLSML-VKLSMSNNSISGVIPDNIGDF-----KSLEFLDVSDNLFSSSLPSGIGKLES 143
SNL L +K + + S+S NI DF K LE+L++ DN S+ + L S
Sbjct: 295 LSNLRYLSLKRAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNNIPSTKSNTFTGLVS 354
Query: 144 LQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXXXXXXGFS 203
L+ LSL+ F+ L + VS L+H+ P LT G
Sbjct: 355 LKYLSLSKT-FTSLQTLTNETFVS-----LAHS-------PLLTLNLTKNHISKIANG-- 399
Query: 204 KRIPRGFELILGLQVLDFHGNKLDGHLDG-EFFLLTNASHIDFSGNMFVGSSSQKF--LP 260
F + L++LD N+++ L G E+ L N I S N ++ S+ F +P
Sbjct: 400 -----TFSWLGQLRILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYNKYLQLSTSSFALVP 454
Query: 261 GLSQ----------------------SVQYLNLSLNQLTGSLVNGGELQLFENLKVLDLS 298
L + ++ L+LS N + +N L+ ENL++LD
Sbjct: 455 SLQRLMLRRVALKNVDISPSPFRPLRNLTILDLSNNNIAN--INEDLLEGLENLEILDFQ 512
Query: 299 YNQL 302
+N L
Sbjct: 513 HNNL 516
Score = 31.2 bits (69), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 82/214 (38%), Gaps = 21/214 (9%)
Query: 99 LSMSNNSISGVIPDNIGDFK--SLEFLDVSDNLFSSSLPSGIGKLESLQNLSLAGNNFSG 156
LS++NN + K +L LD+S N L SL+ LSL NN
Sbjct: 227 LSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQR 286
Query: 157 LIPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXXXXXXGFSKRIPRGFELILGL 216
L P S GL +++ L SL A T+ FS F+ + L
Sbjct: 287 LSPRSFYGLSNLRYL---------SLKRAFTKQSVSLASHPNIDDFS------FQWLKYL 331
Query: 217 QVLDFHGNKLDGHLDGEFFLLTNASHIDFSGNM--FVGSSSQKFLPGLSQSVQYLNLSLN 274
+ L+ N + F L + ++ S +++ F+ + LNL+ N
Sbjct: 332 EYLNMDDNNIPSTKSNTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAHSPLLTLNLTKN 391
Query: 275 QLTGSLVNGGELQLFENLKVLDLSYNQLTGELPG 308
+ S + G L++LDL N++ +L G
Sbjct: 392 HI--SKIANGTFSWLGQLRILDLGLNEIEQKLSG 423
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 33.5 bits (75), Expect = 0.64, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 11/140 (7%)
Query: 843 GPTQHEKLIL-SDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAV 901
G Q E L+L + G L FL + R+ P++ L V+ G+ YL ++
Sbjct: 77 GVCQAEALMLVMEMAGGGPLHKFLVGK--REEIPVSNVAEL--LHQVSMGMKYLE-EKNF 131
Query: 902 PHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGV--LGYRAPELAASKKP 959
H +L A N+LL A+++D+ L + + + AG L + APE +K
Sbjct: 132 VHRDLAARNVLLVNRHY-AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 190
Query: 960 HPSFKSDVYAFGVILLELLT 979
S +SDV+++GV + E L+
Sbjct: 191 --SSRSDVWSYGVTMWEALS 208
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 33.1 bits (74), Expect = 0.74, Method: Composition-based stats.
Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 25/212 (11%)
Query: 774 EELSRAPAEVLGRSSHGTS---YRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIR 830
EEL + V+ R H T+ + A + N L+ + ++ + R ++
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR--------KLQ 63
Query: 831 HPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVAR 890
HPN+V L + H ++ D ++ G L + R + A +
Sbjct: 64 HPNIVRLHDSIQEESFH--YLVFDLVTGGELFEDIVAREF-----YSEADASHCIQQILE 116
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNA--RVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ Y H + H NLK N+LL A ++AD+ L + + AG GY
Sbjct: 117 SIAYCH-SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF--AGTPGY 173
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
+PE+ K P+ S D++A GVIL LL G
Sbjct: 174 LSPEVL-KKDPY-SKPVDIWACGVILYILLVG 203
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 33.1 bits (74), Expect = 0.74, Method: Composition-based stats.
Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 25/212 (11%)
Query: 774 EELSRAPAEVLGRSSHGTS---YRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIR 830
EEL + V+ R H T+ + A + N L+ + ++ + R ++
Sbjct: 11 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR--------KLQ 62
Query: 831 HPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVAR 890
HPN+V L + H ++ D ++ G L + R + A +
Sbjct: 63 HPNIVRLHDSIQEESFH--YLVFDLVTGGELFEDIVAREF-----YSEADASHCIQQILE 115
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNA--RVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ Y H + H NLK N+LL A ++AD+ L + + AG GY
Sbjct: 116 SIAYCH-SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF--AGTPGY 172
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
+PE+ K P+ S D++A GVIL LL G
Sbjct: 173 LSPEVL-KKDPY-SKPVDIWACGVILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 33.1 bits (74), Expect = 0.74, Method: Composition-based stats.
Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 25/212 (11%)
Query: 774 EELSRAPAEVLGRSSHGTS---YRATLENGMFLTVKWLREGVAKQRXXXXXXXXXXXNIR 830
EEL + V+ R H T+ + A + N L+ + ++ + R ++
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR--------KLQ 63
Query: 831 HPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVAR 890
HPN+V L + H ++ D ++ G L + R + A +
Sbjct: 64 HPNIVRLHDSIQEESFH--YLVFDLVTGGELFEDIVAREF-----YSEADASHCIQQILE 116
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNA--RVADYCLHRLMTQAGTIEQILDAGVLGY 948
+ Y H + H NLK N+LL A ++AD+ L + + AG GY
Sbjct: 117 SIAYCH-SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF--AGTPGY 173
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
+PE+ K P+ S D++A GVIL LL G
Sbjct: 174 LSPEVL-KKDPY-SKPVDIWACGVILYILLVG 203
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
Query: 76 LDNLGLS----AAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGD-FKSLEFLDVSDNLF 130
L LGL+ A+ L VF +L+ L KL + N + +P + D L+ L ++ N
Sbjct: 85 LGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKS-LPSGVFDRLTKLKELRLNTNQL 143
Query: 131 SSSLPSGIGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPAL 186
S KL +LQ LSL+ N + + L +Q++ L N F S L
Sbjct: 144 QSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRCETL 199
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 67/183 (36%), Gaps = 29/183 (15%)
Query: 76 LDNLGLSAAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLP 135
L + GL+ +D + F L+ L L++ N + + D L L +++N +S LP
Sbjct: 42 LQSTGLATLSD-ATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLAS-LP 99
Query: 136 SGI-GKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXX 194
G+ L L L L GN L L ++ L L+ N
Sbjct: 100 LGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQL---------------- 143
Query: 195 XXXXXXGFSKRIPRG-FELILGLQVLDFHGNKLDGHLDGEFFLLTNASHIDFSGNMFVGS 253
+ IP G F+ + LQ L N+L G F L I GN F S
Sbjct: 144 ---------QSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194
Query: 254 SSQ 256
+
Sbjct: 195 RCE 197
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Query: 79 LGLSAAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGI 138
+G + DLS +NLS L L + N IS + + + D L+ L+V N S S +
Sbjct: 228 IGNNKITDLSPLANLSQLTWLEIGTNQISDI--NAVKDLTKLKXLNVGSNQISD--ISVL 283
Query: 139 GKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPA 185
L L +L L N + + GL ++ +L LS N + P A
Sbjct: 284 NNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHITDIRPLA 330
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 96/236 (40%), Gaps = 52/236 (22%)
Query: 81 LSAAADLSVFSNLSMLVKLSMSNNS-ISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIG 139
S A SVF+ +++ + LS+S+ I V P + F FL+ + N+F+ S+ G
Sbjct: 319 FSKEALYSVFAEMNIKM-LSISDTPFIHMVCPPSPSSFT---FLNFTQNVFTDSVFQGCS 374
Query: 140 KLESLQNLSLAGN---NF--SGLIPDSVSGL----------------------VSIQSLD 172
L+ LQ L L N NF L+ ++S L SI L+
Sbjct: 375 TLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLN 434
Query: 173 LSHNSFSGS----LPPALTRXXXXXXXXXXXXGFSKRIPRGFELILGLQVLDFHGNKLDG 228
LS N +GS LPP + IP+ + LQ L+ N+L
Sbjct: 435 LSSNMLTGSVFRCLPPKVKVLDLHNNRIMS-------IPKDVTHLQALQELNVASNQLKS 487
Query: 229 HLDGEFFLLTNASHIDFSGNMFVGSSSQKFLPGLSQSVQYLNLSLNQLTGSLVNGG 284
DG F LT+ +I N + + PG ++YL+ +N+ +G + N
Sbjct: 488 VPDGVFDRLTSLQYIWLHDNPWDCTC-----PG----IRYLSEWINKHSGVVRNSA 534
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 33.1 bits (74), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 6/111 (5%)
Query: 76 LDNLGLS----AAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGD-FKSLEFLDVSDNLF 130
L LGL+ A+ L VF +L+ L KL + N + +P + D L+ L ++ N
Sbjct: 85 LGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKS-LPSGVFDRLTKLKELRLNTNQL 143
Query: 131 SSSLPSGIGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGS 181
S KL +LQ LSL+ N + + L +Q++ L N F S
Sbjct: 144 QSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 67/183 (36%), Gaps = 29/183 (15%)
Query: 76 LDNLGLSAAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLP 135
L + GL+ +D + F L+ L L++ N + + D L L +++N +S LP
Sbjct: 42 LQSTGLATLSD-ATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLAS-LP 99
Query: 136 SGI-GKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXX 194
G+ L L L L GN L L ++ L L+ N
Sbjct: 100 LGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQL---------------- 143
Query: 195 XXXXXXGFSKRIPRG-FELILGLQVLDFHGNKLDGHLDGEFFLLTNASHIDFSGNMFVGS 253
+ IP G F+ + LQ L N+L G F L I GN F S
Sbjct: 144 ---------QSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194
Query: 254 SSQ 256
+
Sbjct: 195 RCE 197
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 17/105 (16%)
Query: 884 IAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADY--CLHRLMTQAGTIEQIL 941
+A+D L Y+H D +K NILLD + R+AD+ CL + GT+ ++
Sbjct: 173 MAIDSVHRLGYVHRD-------IKPDNILLDRCG-HIRLADFGSCLK--LRADGTVRSLV 222
Query: 942 DAGVLGYRAPELAASKKPHPSF-----KSDVYAFGVILLELLTGR 981
G Y +PE+ + P + D +A GV E+ G+
Sbjct: 223 AVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQ 267
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
+ H N+V L T K+++ ++ GSL + L + G P + + L + D
Sbjct: 63 KLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPES--EFLIVLRD 120
Query: 888 VARGLNYLHFDRAVPHGNLKATNIL 912
V G+N+L + + H N+K NI+
Sbjct: 121 VVGGMNHLR-ENGIVHRNIKPGNIM 144
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 890 RGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLM-TQAGTIEQILDAGVLGY 948
+GL + H + + H +LK N+L++ ++ D+ L R T + L Y
Sbjct: 119 QGLAFCH-ENKILHRDLKPQNLLINKRG-QLKLGDFGLARAFGIPVNTFSS--EVVTLWY 174
Query: 949 RAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
RAP++ + + S D+++ G IL E++TG+
Sbjct: 175 RAPDVLMGSRTY-STSIDIWSCGCILAEMITGK 206
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 53/149 (35%), Gaps = 7/149 (4%)
Query: 100 SMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNLSLAGNNFSGLIP 159
S + S+ IP N + L + DN + P L +L+ L L N L
Sbjct: 28 SKRHASVPAGIPTNA------QILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPV 81
Query: 160 DSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXXXXXXGFSKRIPRGFELILGLQVL 219
L + LDL N + LP A+ +PRG E + L L
Sbjct: 82 GVFDSLTQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHL 140
Query: 220 DFHGNKLDGHLDGEFFLLTNASHIDFSGN 248
N+L G F L++ +H GN
Sbjct: 141 ALDQNQLKSIPHGAFDRLSSLTHAYLFGN 169
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 890 RGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYR 949
+GL Y+H + H +LK N+ ++ D ++ D+ L R QA + E YR
Sbjct: 139 KGLRYIH-AAGIIHRDLKPGNLAVN-EDCELKILDFGLAR---QADS-EMXGXVVTRWYR 192
Query: 950 APELAASKKPHPSFKSDVYAFGVILLELLTGR 981
APE+ + + D+++ G I+ E++TG+
Sbjct: 193 APEVILNWMRYTQ-TVDIWSVGCIMAEMITGK 223
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 24/165 (14%)
Query: 831 HPNVVGLRGYYW--GPTQHEKLILSDYISPGSLASFLYDR-----PGRKGPPL------- 876
H N+V L G GPT L++++Y G L +FL + + P +
Sbjct: 102 HMNIVNLLGACTIGGPT----LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 157
Query: 877 -TWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAG 935
L + VA+G+ +L + H +L A NILL + ++ D+ L R +
Sbjct: 158 LDLEDLLSFSYQVAKGMAFLASKNCI-HRDLAARNILLTHGRIT-KICDFGLARDIKNDS 215
Query: 936 TIEQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+A + + + APE + +F+SDV+++G+ L EL +
Sbjct: 216 NYVVKGNARLPVKWMAPE--SIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
pdb|2Z80|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 353
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 118 KSLEFLDVSDNLFSSSLPSGIGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNS 177
++++ LD+S+N + S + + +LQ L L N + + DS S L S++ LDLS+N
Sbjct: 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNY 111
Query: 178 FS 179
S
Sbjct: 112 LS 113
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 85 ADLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESL 144
+DL NL LV +++N I+ + D+ SLE LD+S N S+ S L SL
Sbjct: 70 SDLQRCVNLQALV---LTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSL 126
Query: 145 QNLSLAGNNFSGL 157
L+L GN + L
Sbjct: 127 TFLNLLGNPYKTL 139
Score = 30.0 bits (66), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 4/150 (2%)
Query: 453 QKLRVLDLSFNHLDGPFLTNLLNSSTLQELHLADNLLTGVLDFSPPSVSNLQVLDLSHNR 512
+ ++ LDLS N + ++L LQ L L N + + + S S+ +L+ LDLS+N
Sbjct: 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNY 111
Query: 513 LNGYFPDRLGSLTGLKVLCLAGNNISGSLPTSM-ANMTSLSSLVI-SQNHFTGPLPNNLP 570
L+ L+ L L L GN TS+ +++T L L + + + FT +
Sbjct: 112 LSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFA 171
Query: 571 --NSLETFNVSYNDFSGAVPENLRKFPSSS 598
LE + +D P++L+ + S
Sbjct: 172 GLTFLEELEIDASDLQSYEPKSLKSIQNVS 201
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 93/239 (38%), Gaps = 32/239 (13%)
Query: 90 FSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNLSL 149
F NL L L + NN IS + P LE L +S N LP + K +LQ L +
Sbjct: 72 FKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL-KELPEKMPK--TLQELRV 128
Query: 150 AGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXXXXXXGFSKRIPRG 209
N + + +GL + ++L N S G +G
Sbjct: 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSS-------------------GIENGAFQG 169
Query: 210 FELILGLQVLDFHGNKLDGHLDGEFFLLTNASHIDFSGNMFVGSSSQKFLPGLSQSVQYL 269
+ + +++ D + + L L H+D + V ++S K L L++ L
Sbjct: 170 MKKLSYIRIADTNITTIPQGLPPSLTEL----HLDGNKITKVDAASLKGLNNLAK----L 221
Query: 270 NLSLNQLTGSLVNGGELQLFENLKVLDLSYNQLTGELPGFNFVYELQVLKLSNNRFSGF 328
LS N + S V+ G L +L+ L L+ N+L G +QV+ L NN S
Sbjct: 222 GLSFNSI--SAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAI 278
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 24/165 (14%)
Query: 831 HPNVVGLRGYYW--GPTQHEKLILSDYISPGSLASFLYDR-----PGRKGPPL------- 876
H N+V L G GPT L++++Y G L +FL + + P +
Sbjct: 86 HMNIVNLLGACTIGGPT----LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 141
Query: 877 -TWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAG 935
L + VA+G+ +L + H +L A NILL + ++ D+ L R +
Sbjct: 142 LDLEDLLSFSYQVAKGMAFLASKNCI-HRDLAARNILLTHGRIT-KICDFGLARDIKNDS 199
Query: 936 TIEQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+A + + + APE + +F+SDV+++G+ L EL +
Sbjct: 200 NYVVKGNARLPVKWMAPE--SIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 83 AAADLSVFSNLSMLVKLS---MSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIG 139
A +L NL+ L+KL +S N +S + P + L+ L + + +
Sbjct: 193 AMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFD 252
Query: 140 KLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFS 179
L+SL ++LA NN + L D + L ++ + L HN ++
Sbjct: 253 NLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 828 NIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
+ H N+V L T K+++ ++ GSL + L + G P ++ L + D
Sbjct: 63 KLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPE--SEFLIVLRD 120
Query: 888 VARGLNYLHFDRAVPHGNLKATNIL 912
V G+N+L + + H N+K NI+
Sbjct: 121 VVGGMNHLR-ENGIVHRNIKPGNIM 144
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 24/165 (14%)
Query: 831 HPNVVGLRGYYW--GPTQHEKLILSDYISPGSLASFLYDR-----PGRKGPPLTWAQRL- 882
H N+V L G GPT L++++Y G L +FL + + P + L
Sbjct: 109 HMNIVNLLGACTIGGPT----LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 164
Query: 883 -------KIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAG 935
+ VA+G+ +L + H +L A NILL + ++ D+ L R +
Sbjct: 165 LDLEDLLSFSYQVAKGMAFLASKNCI-HRDLAARNILLTHGRIT-KICDFGLARHIKNDS 222
Query: 936 TIEQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+A + + + APE + +F+SDV+++G+ L EL +
Sbjct: 223 NYVVKGNARLPVKWMAPE--SIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|4ARN|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|C Chain C, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|D Chain D, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARR|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
pdb|4ARR|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
Length = 279
Score = 32.0 bits (71), Expect = 2.0, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 116 DFKSLEFLDVSDNLFSSSLPSGI-GKLESLQNLSLAGNNFSGLIPDSV-SGLVSIQSLDL 173
D ++LE ++ N +P GI GK+ L+ L+LA N +PD + L S+Q + L
Sbjct: 168 DLENLESIEFGSNKLRQ-MPRGIFGKMPKLKQLNLASNQLKS-VPDGIFDRLTSLQKIWL 225
Query: 174 SHNSFSGSLP 183
N + S P
Sbjct: 226 HTNPWDCSCP 235
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 93/239 (38%), Gaps = 32/239 (13%)
Query: 90 FSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNLSL 149
F NL L L + NN IS + P LE L +S N LP + K +LQ L +
Sbjct: 72 FKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL-KELPEKMPK--TLQELRV 128
Query: 150 AGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXXXXXXGFSKRIPRG 209
N + + +GL + ++L N S G +G
Sbjct: 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSS-------------------GIENGAFQG 169
Query: 210 FELILGLQVLDFHGNKLDGHLDGEFFLLTNASHIDFSGNMFVGSSSQKFLPGLSQSVQYL 269
+ + +++ D + + L L H+D + V ++S K L L++ L
Sbjct: 170 MKKLSYIRIADTNITTIPQGLPPSLTEL----HLDGNKITKVDAASLKGLNNLAK----L 221
Query: 270 NLSLNQLTGSLVNGGELQLFENLKVLDLSYNQLTGELPGFNFVYELQVLKLSNNRFSGF 328
LS N + S V+ G L +L+ L L+ N+L G +QV+ L NN S
Sbjct: 222 GLSFNSI--SAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAI 278
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 24/165 (14%)
Query: 831 HPNVVGLRGYYW--GPTQHEKLILSDYISPGSLASFLYDR-----PGRKGPPLTWAQRL- 882
H N+V L G GPT L++++Y G L +FL + + P + L
Sbjct: 104 HMNIVNLLGACTIGGPT----LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 159
Query: 883 -------KIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAG 935
+ VA+G+ +L + H +L A NILL + ++ D+ L R +
Sbjct: 160 LDLEDLLSFSYQVAKGMAFLASKNCI-HRDLAARNILLTHGRIT-KICDFGLARDIKNDS 217
Query: 936 TIEQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+A + + + APE + +F+SDV+++G+ L EL +
Sbjct: 218 NYVVKGNARLPVKWMAPE--SIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 37/91 (40%)
Query: 88 SVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNL 147
+ F +L L L + N I V SL+ L + N + P L L L
Sbjct: 146 NTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTL 205
Query: 148 SLAGNNFSGLIPDSVSGLVSIQSLDLSHNSF 178
L NN S L + + L S+Q L L+ N +
Sbjct: 206 YLFANNLSMLPAEVLVPLRSLQYLRLNDNPW 236
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 46/124 (37%), Gaps = 4/124 (3%)
Query: 139 GKLESLQNLS---LAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTR-XXXXXX 194
+S +NL+ L N +G+ + +GL ++ LDLS N+ + P R
Sbjct: 49 ASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHT 108
Query: 195 XXXXXXGFSKRIPRGFELILGLQVLDFHGNKLDGHLDGEFFLLTNASHIDFSGNMFVGSS 254
G + P F + LQ L N L D F L N +H+ GN
Sbjct: 109 LHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVP 168
Query: 255 SQKF 258
F
Sbjct: 169 EHAF 172
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 130/322 (40%), Gaps = 25/322 (7%)
Query: 255 SQKFLPGLSQ-SVQYLNLSLNQLTGSLVNGGELQLFENLKVLDLSYNQLTGELPGFNFVY 313
S L GL + SV+ LNL ++ + ++ Q F L+ LDL+ L G G +
Sbjct: 241 SSAMLKGLCEMSVESLNLQEHRFSD--ISSTTFQCFTQLQELDLTATHLKGLPSGMKGLN 298
Query: 314 ELQVLKLSNNRFSGFIPXXXXXXXXXXXXXXXXXXXXXXGSVSMILST-NLHMLNLSSNG 372
L+ L LS N F V + NL L+LS N
Sbjct: 299 LLKKLVLSVNHFDQLCQISAANFPSLTHLYIRGNVKKLHLGVGCLEKLGNLQTLDLSHND 358
Query: 373 LTGELPLLTGSCAV----------LDLSNNQFEGNLSRILKWG-NIEYLDLSRNHLTGSI 421
+ + C++ L+LS+N+ G S+ K +E LDL+ L +
Sbjct: 359 IEA-----SDCCSLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRLHINA 413
Query: 422 PEETPQFLRXXXXXXXXXXXXXXXPKVIIQ-YQKLRVLDLSFNHL-DGPFL-TNLLNS-S 477
P+ Q L + ++ LR L+L NH DG TNLL +
Sbjct: 414 PQSPFQNLHFLQVLNLTYCFLDTSNQHLLAGLPVLRHLNLKGNHFQDGTITKTNLLQTVG 473
Query: 478 TLQELHLADNLLTGVLDFSPPSVSNLQVLDLSHNRLNGYFPDRLGSLTGLKVLCLAGNNI 537
+L+ L L+ L + + S+ + +DLSHN L D L L G+ L LA N+I
Sbjct: 474 SLEVLILSSCGLLSIDQQAFHSLGKMSHVDLSHNSLTCDSIDSLSHLKGI-YLNLAANSI 532
Query: 538 SGSLPTSMANMTSLSSLVISQN 559
+ P + ++ S++ +S N
Sbjct: 533 NIISPRLLPILSQQSTINLSHN 554
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 111/274 (40%), Gaps = 33/274 (12%)
Query: 69 GNVAGVVLDN--LGLSAAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFK--SLEFLD 124
G + G+ L+N LG S L + + + LS+SN+ +S K +L LD
Sbjct: 205 GRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLD 264
Query: 125 VSDNLFSSSLPSGIGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPP 184
+S N + L L+ L NN L S+ GL +++ L+L
Sbjct: 265 LSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKR--------- 315
Query: 185 ALTRXXXXXXXXXXXXGFSKRIPRGFELILGLQVLDFHGNKLDGHLDGEFFLLTNASHID 244
+ T+ FS F+ + L+ L+ N + G F L N ++
Sbjct: 316 SFTKQSISLASLPKIDDFS------FQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLS 369
Query: 245 FSGNM--FVGSSSQKFLPGLSQSVQYLNLSLNQLTGSLVNGGELQLFENLKVLDLSYNQL 302
S + +++ F+ + LNL+ N++ S + +L+VLDL N++
Sbjct: 370 LSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKI--SKIESDAFSWLGHLEVLDLGLNEI 427
Query: 303 TGELPGFNF-----VYEL-----QVLKLSNNRFS 326
EL G + ++E+ + L+L+ N F+
Sbjct: 428 GQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFA 461
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 24/165 (14%)
Query: 831 HPNVVGLRGYYW--GPTQHEKLILSDYISPGSLASFLYDR-----PGRKGPPLTWAQRL- 882
H N+V L G GPT L++++Y G L +FL + + P + L
Sbjct: 109 HMNIVNLLGACTIGGPT----LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 164
Query: 883 -------KIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAG 935
+ VA+G+ +L + H +L A NILL + ++ D+ L R +
Sbjct: 165 LDLEDLLSFSYQVAKGMAFLASKNCI-HRDLAARNILLTHGRIT-KICDFGLARDIKNDS 222
Query: 936 TIEQILDAGV-LGYRAPELAASKKPHPSFKSDVYAFGVILLELLT 979
+A + + + APE + +F+SDV+++G+ L EL +
Sbjct: 223 NYVVKGNARLPVKWMAPE--SIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 876 LTWAQRLKIAVDVAR----GLNYLHFDRAVPHGNLKATNILLD-GPDLNARVADYCLHRL 930
L + QR K+ ++ R L+YLH ++ + H ++K N L ++ D+ L +
Sbjct: 161 LDFVQREKLISNIMRQIFSALHYLH-NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKE 219
Query: 931 MTQAGTIE---QILDAGVLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
+ E AG + APE+ + K D ++ GV+L LL G
Sbjct: 220 FYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMG 272
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 31.2 bits (69), Expect = 2.9, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 15/154 (9%)
Query: 829 IRHPNVVGLRGYYWGPTQ-HEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVD 887
++HPN+V L + + H D+ L + P +TW Q L+
Sbjct: 59 LKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITW-QTLQ---- 113
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILD-AGVL 946
+N+ H + H ++K NIL+ + ++ D+ RL+T G + D
Sbjct: 114 ---AVNFCHKHNCI-HRDVKPENILITKHSV-IKLCDFGFARLLT--GPSDYYDDEVATR 166
Query: 947 GYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
YR+PEL + DV+A G + ELL+G
Sbjct: 167 WYRSPELLVGDTQYGP-PVDVWAIGCVFAELLSG 199
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 107/252 (42%), Gaps = 25/252 (9%)
Query: 93 LSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNL---SL 149
LS L KL +S N + + +F SL L + N + L G G LE+L+NL L
Sbjct: 300 LSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGN--TKRLELGTGCLENLENLRELDL 357
Query: 150 AGNNF--SGLIPDSVSGLVSIQSLDLSHNSFSGSLPPALTRXXXXXXXXXXXXGFSKRIP 207
+ ++ S + L +QSL+LS+N A +
Sbjct: 358 SHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDA 417
Query: 208 RG-FELILGLQVLDFHGNKLDGHLDGEFFLLTNASHIDFSGNMFVGSSSQKFLPGLSQSV 266
+ F+ + L+VL+ + LD + F L H++ GN F + QK + S+
Sbjct: 418 QSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQK-----TNSL 472
Query: 267 QYL-NLSLNQLTGSLVNGGELQLFENLKVL---DLSYNQLTGE----LPGFNFVYELQVL 318
Q L L + L+ ++ + F +LK++ DLS+N+LT L +Y L
Sbjct: 473 QTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGIY----L 528
Query: 319 KLSNNRFSGFIP 330
L++N S +P
Sbjct: 529 NLASNHISIILP 540
Score = 30.0 bits (66), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 472 NLLNSSTLQELHLADNLLTGVLDFSP------PSVSNLQVLDLSHNRLNGYFPDRLGSLT 525
N+ +++LQ L + L+ D S S+ + +DLSHNRL + L L
Sbjct: 465 NIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLK 524
Query: 526 GLKVLCLAGNNISGSLPTSMANMTSLSSLVISQN 559
G+ L LA N+IS LP+ + ++ ++ + QN
Sbjct: 525 GI-YLNLASNHISIILPSLLPILSQQRTINLRQN 557
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 111/274 (40%), Gaps = 33/274 (12%)
Query: 69 GNVAGVVLDN--LGLSAAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFK--SLEFLD 124
G + G+ L+N LG S L + + + LS+SN+ +S K +L LD
Sbjct: 200 GRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLD 259
Query: 125 VSDNLFSSSLPSGIGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPP 184
+S N + L L+ L NN L S+ GL +++ L+L
Sbjct: 260 LSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKR--------- 310
Query: 185 ALTRXXXXXXXXXXXXGFSKRIPRGFELILGLQVLDFHGNKLDGHLDGEFFLLTNASHID 244
+ T+ FS F+ + L+ L+ N + G F L N ++
Sbjct: 311 SFTKQSISLASLPKIDDFS------FQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLS 364
Query: 245 FSGNM--FVGSSSQKFLPGLSQSVQYLNLSLNQLTGSLVNGGELQLFENLKVLDLSYNQL 302
S + +++ F+ + LNL+ N++ S + +L+VLDL N++
Sbjct: 365 LSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKI--SKIESDAFSWLGHLEVLDLGLNEI 422
Query: 303 TGELPGFNF-----VYEL-----QVLKLSNNRFS 326
EL G + ++E+ + L+L+ N F+
Sbjct: 423 GQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFA 456
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 111/274 (40%), Gaps = 33/274 (12%)
Query: 69 GNVAGVVLDN--LGLSAAADLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFK--SLEFLD 124
G + G+ L+N LG S L + + + LS+SN+ +S K +L LD
Sbjct: 195 GRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLD 254
Query: 125 VSDNLFSSSLPSGIGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPP 184
+S N + L L+ L NN L S+ GL +++ L+L
Sbjct: 255 LSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKR--------- 305
Query: 185 ALTRXXXXXXXXXXXXGFSKRIPRGFELILGLQVLDFHGNKLDGHLDGEFFLLTNASHID 244
+ T+ FS F+ + L+ L+ N + G F L N ++
Sbjct: 306 SFTKQSISLASLPKIDDFS------FQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLS 359
Query: 245 FSGNM--FVGSSSQKFLPGLSQSVQYLNLSLNQLTGSLVNGGELQLFENLKVLDLSYNQL 302
S + +++ F+ + LNL+ N++ S + +L+VLDL N++
Sbjct: 360 LSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKI--SKIESDAFSWLGHLEVLDLGLNEI 417
Query: 303 TGELPGFNF-----VYEL-----QVLKLSNNRFS 326
EL G + ++E+ + L+L+ N F+
Sbjct: 418 GQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFA 451
>pdb|2RKB|A Chain A, Serine Dehydratase Like-1 From Human Cancer Cells
pdb|2RKB|B Chain B, Serine Dehydratase Like-1 From Human Cancer Cells
pdb|2RKB|C Chain C, Serine Dehydratase Like-1 From Human Cancer Cells
pdb|2RKB|D Chain D, Serine Dehydratase Like-1 From Human Cancer Cells
pdb|2RKB|E Chain E, Serine Dehydratase Like-1 From Human Cancer Cells
Length = 318
Score = 31.2 bits (69), Expect = 3.3, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 9/53 (16%)
Query: 999 WMQLKV--AEGHGSDCFDAAV-------MPEMVNPAAEKGMKEVLGIALRCIR 1042
W + + E HG+ CF+AA+ +P++ + A G K V AL C++
Sbjct: 181 WQHVPIIAMETHGAHCFNAAITAGKLVTLPDITSVAKSLGAKTVAARALECMQ 233
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 31.2 bits (69), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 86 DLSVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQ 145
DL+ NL+ + +L +S N + V I +S++ LD++ + P + L +LQ
Sbjct: 83 DLTPLKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITDVTP--LAGLSNLQ 138
Query: 146 NLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPA 185
L L N + + P ++GL ++Q L + +N + P A
Sbjct: 139 VLYLDLNQITNISP--LAGLTNLQYLSIGNNQVNDLTPLA 176
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 30.8 bits (68), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 5/118 (4%)
Query: 74 VVLDNLGLSAAADL-----SVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDN 128
+L+ L LS A L + F L L L + + + P +L++L + DN
Sbjct: 80 ALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDN 139
Query: 129 LFSSSLPSGIGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPAL 186
+ L +L +L L GN S + + GL S+ L L N + P A
Sbjct: 140 ALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAF 197
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 30.8 bits (68), Expect = 3.8, Method: Composition-based stats.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 24/204 (11%)
Query: 784 LGRSSHGTSYRATLENGMFLT-VKWL------REGVAKQRXXXXXXXXXXXNIRHPNVVG 836
LG+ G Y A + F+ +K L +EGV Q ++ HPN++
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQ---LRREIEIQAHLHHPNILR 87
Query: 837 LRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLH 896
L Y++ + ++ +Y G L L +K + I ++A L Y H
Sbjct: 88 LYNYFY--DRRRIYLILEYAPRGELYKEL-----QKSCTFDEQRTATIMEELADALMYCH 140
Query: 897 FDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAAS 956
+ V H ++K N+LL ++AD+ A ++ + G L Y PE+
Sbjct: 141 -GKKVIHRDIKPENLLLG-LKGELKIADFGWS---VHAPSLRRKTMCGTLDYLPPEMIEG 195
Query: 957 KKPHPSFKSDVYAFGVILLELLTG 980
+ + K D++ GV+ ELL G
Sbjct: 196 RMHNE--KVDLWCIGVLCYELLVG 217
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 30.8 bits (68), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 5/118 (4%)
Query: 74 VVLDNLGLSAAADL-----SVFSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDN 128
+L+ L LS A L + F L L L + + + P +L++L + DN
Sbjct: 79 ALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDN 138
Query: 129 LFSSSLPSGIGKLESLQNLSLAGNNFSGLIPDSVSGLVSIQSLDLSHNSFSGSLPPAL 186
+ L +L +L L GN S + + GL S+ L L N + P A
Sbjct: 139 ALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAF 196
>pdb|1LTX|A Chain A, Structure Of Rab Escort Protein-1 In Complex With Rab
Geranylgeranyl Transferase And Isoprenoid
Length = 567
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 9/59 (15%)
Query: 506 LDLSHNRLNGYFPDRLGSLTGLKVLCLAGN---NISGSLPTSMANMTSLSSLVISQNHF 561
LDLSHNRL P L +L L+VL + N N+ G +AN+ L L++ N
Sbjct: 468 LDLSHNRLRA-LPPALAALRCLEVLQASDNALENVDG-----VANLPRLQELLLCNNRL 520
>pdb|1DCE|A Chain A, Crystal Structure Of Rab Geranylgeranyltransferase From
Rat Brain
pdb|1DCE|C Chain C, Crystal Structure Of Rab Geranylgeranyltransferase From
Rat Brain
Length = 567
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 9/59 (15%)
Query: 506 LDLSHNRLNGYFPDRLGSLTGLKVLCLAGN---NISGSLPTSMANMTSLSSLVISQNHF 561
LDLSHNRL P L +L L+VL + N N+ G +AN+ L L++ N
Sbjct: 468 LDLSHNRLRA-LPPALAALRCLEVLQASDNALENVDG-----VANLPRLQELLLCNNRL 520
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 30.4 bits (67), Expect = 5.1, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 888 VARGLNYLHFDRAVPHGNLKATNILLDGPDLNA--RVADYCLHRLMTQAGTIEQILDAGV 945
+ +N++H + H +LK N+LL A ++AD+ L + Q AG
Sbjct: 139 ILESVNHIH-QHDIVHRDLKPENLLLASKCKGAAVKLADFGL-AIEVQGEQQAWFGFAGT 196
Query: 946 LGYRAPELAASKKPHPSFKSDVYAFGVILLELLTG 980
GY +PE+ K P+ D++A GVIL LL G
Sbjct: 197 PGYLSPEVL-RKDPYGK-PVDIWACGVILYILLVG 229
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 30.4 bits (67), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 68/157 (43%), Gaps = 13/157 (8%)
Query: 831 HPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVAR 890
HPN+V R + +E +++ +++ GS + L A L+ V +
Sbjct: 85 HPNIVPYRATFIA--DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQ---GVLK 139
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQIL------DAG 944
L+Y+H V H ++KA++IL+ D ++ + M G ++++
Sbjct: 140 ALDYIHHMGYV-HRSVKASHILI-SVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVK 197
Query: 945 VLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
VL + +PE+ KSD+Y+ G+ EL G
Sbjct: 198 VLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGH 234
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 30.4 bits (67), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 68/157 (43%), Gaps = 13/157 (8%)
Query: 831 HPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVAR 890
HPN+V R + +E +++ +++ GS + L A L+ V +
Sbjct: 69 HPNIVPYRATFIA--DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQ---GVLK 123
Query: 891 GLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTIEQIL------DAG 944
L+Y+H V H ++KA++IL+ D ++ + M G ++++
Sbjct: 124 ALDYIHHMGYV-HRSVKASHILI-SVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVK 181
Query: 945 VLGYRAPELAASKKPHPSFKSDVYAFGVILLELLTGR 981
VL + +PE+ KSD+Y+ G+ EL G
Sbjct: 182 VLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGH 218
>pdb|2B98|A Chain A, Crystal Structure Of An Archaeal Pentameric Riboflavin
Synthase
pdb|2B98|B Chain B, Crystal Structure Of An Archaeal Pentameric Riboflavin
Synthase
pdb|2B98|C Chain C, Crystal Structure Of An Archaeal Pentameric Riboflavin
Synthase
pdb|2B98|D Chain D, Crystal Structure Of An Archaeal Pentameric Riboflavin
Synthase
pdb|2B98|E Chain E, Crystal Structure Of An Archaeal Pentameric Riboflavin
Synthase
pdb|2B99|A Chain A, Crystal Structure Of An Archaeal Pentameric Riboflavin
Synthase Complex With A Substrate Analog Inhibitor
pdb|2B99|B Chain B, Crystal Structure Of An Archaeal Pentameric Riboflavin
Synthase Complex With A Substrate Analog Inhibitor
pdb|2B99|C Chain C, Crystal Structure Of An Archaeal Pentameric Riboflavin
Synthase Complex With A Substrate Analog Inhibitor
pdb|2B99|D Chain D, Crystal Structure Of An Archaeal Pentameric Riboflavin
Synthase Complex With A Substrate Analog Inhibitor
pdb|2B99|E Chain E, Crystal Structure Of An Archaeal Pentameric Riboflavin
Synthase Complex With A Substrate Analog Inhibitor
Length = 156
Score = 30.0 bits (66), Expect = 7.8, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 969 AFGVILLELLTGRCAGDVISGEGAGVD--LTDWMQLKVAEGHGSDCFDAAVMPEMVNPAA 1026
+ G++L +L+T + +V E D DW+ + AE H + + PE + A
Sbjct: 81 SLGLMLAQLMTNKHIIEVFVHEDEAKDDKELDWLAKRRAEEHAENVYYLLFKPEYLTRMA 140
Query: 1027 EKGMKE 1032
KG+++
Sbjct: 141 GKGLRQ 146
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 29.6 bits (65), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 20/142 (14%)
Query: 850 LILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKAT 909
I +Y G+L ++ + W ++ + L+Y+H + + H +LK
Sbjct: 91 FIQMEYCENGTLYDLIHSENLNQQRDEYW----RLFRQILEALSYIH-SQGIIHRDLKPM 145
Query: 910 NILLDGPDLNARVADYCL----HR------LMTQ--AGTIEQILDA-GVLGYRAPELAAS 956
NI +D N ++ D+ L HR L +Q G+ + + A G Y A E+
Sbjct: 146 NIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDG 204
Query: 957 KKPHPSFKSDVYAFGVILLELL 978
H + K D+Y+ G+I E++
Sbjct: 205 T-GHYNEKIDMYSLGIIFFEMI 225
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 29.6 bits (65), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 90 FSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNLSL 149
+ +LS L L ++ N I + SL+ L + +S IG L++L+ L++
Sbjct: 73 YQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 132
Query: 150 AGNNFSGL-IPDSVSGLVSIQSLDLSHNSFSG 180
A N +P+ S L +++ LDLS N
Sbjct: 133 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 164
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 29.6 bits (65), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 90 FSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNLSL 149
+ +LS L L ++ N I + SL+ L + +S IG L++L+ L++
Sbjct: 73 YQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 132
Query: 150 AGNNFSGL-IPDSVSGLVSIQSLDLSHN 176
A N +P+ S L +++ LDLS N
Sbjct: 133 AHNLIQSFKLPEYFSNLTNLEHLDLSSN 160
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 29.6 bits (65), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 90 FSNLSMLVKLSMSNNSISGVIPDNIGDFKSLEFLDVSDNLFSSSLPSGIGKLESLQNLSL 149
+ +LS L L ++ N I + SL+ L + +S IG L++L+ L++
Sbjct: 74 YQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 133
Query: 150 AGNNFSGL-IPDSVSGLVSIQSLDLSHNSFSG 180
A N +P+ S L +++ LDLS N
Sbjct: 134 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 165
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 29.6 bits (65), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 50/120 (41%), Gaps = 10/120 (8%)
Query: 447 KVIIQYQKLRVLDLSFNHLDGPFLTNLLNSSTLQELHLADNLLT----GVLDFSPPSVSN 502
K + KLR+L L+ N L L+ L + DN L GV D + N
Sbjct: 55 KAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFD----QLVN 110
Query: 503 LQVLDLSHNRLNGYFPDRLGSLTGLKVLCLAGNNISGSLPTSMAN-MTSLSSLVISQNHF 561
L L L N+L P SLT L L L N + SLP + + +TSL L + N
Sbjct: 111 LAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQL 169
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.136 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,004,043
Number of Sequences: 62578
Number of extensions: 1227318
Number of successful extensions: 4249
Number of sequences better than 100.0: 726
Number of HSP's better than 100.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 641
Number of HSP's that attempted gapping in prelim test: 3124
Number of HSP's gapped (non-prelim): 1221
length of query: 1060
length of database: 14,973,337
effective HSP length: 109
effective length of query: 951
effective length of database: 8,152,335
effective search space: 7752870585
effective search space used: 7752870585
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)