Query 001531
Match_columns 1058
No_of_seqs 764 out of 5235
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 03:10:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001531.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001531hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2040 Glycine dehydrogenase 100.0 4E-239 8E-244 1974.4 66.8 956 83-1052 37-999 (1001)
2 PRK12566 glycine dehydrogenase 100.0 1E-216 2E-221 1944.5 89.8 942 92-1049 7-953 (954)
3 TIGR00461 gcvP glycine dehydro 100.0 4E-210 8E-215 1902.3 93.8 935 101-1043 1-939 (939)
4 PLN02414 glycine dehydrogenase 100.0 1E-203 3E-208 1869.0 97.9 962 93-1055 30-991 (993)
5 PRK05367 glycine dehydrogenase 100.0 4E-199 8E-204 1841.9 93.4 943 93-1050 5-954 (954)
6 COG0403 GcvP Glycine cleavage 100.0 3E-113 6E-118 941.3 41.6 435 93-530 2-447 (450)
7 COG1003 GcvP Glycine cleavage 100.0 2E-111 5E-116 922.6 38.8 459 557-1022 29-496 (496)
8 PF02347 GDC-P: Glycine cleava 100.0 8E-101 2E-105 873.2 37.3 425 100-527 1-429 (429)
9 PF02347 GDC-P: Glycine cleava 100.0 2.5E-68 5.3E-73 607.1 30.9 403 514-965 5-429 (429)
10 PRK04366 glycine dehydrogenase 100.0 1.7E-60 3.7E-65 567.6 42.3 446 546-1043 32-481 (481)
11 COG0403 GcvP Glycine cleavage 100.0 1.8E-58 3.8E-63 508.4 33.7 408 517-968 16-447 (450)
12 PRK00451 glycine dehydrogenase 100.0 1E-54 2.2E-59 516.2 42.3 422 100-528 2-443 (447)
13 TIGR00461 gcvP glycine dehydro 100.0 3.7E-55 7.9E-60 537.5 38.1 401 514-966 4-426 (939)
14 PRK04366 glycine dehydrogenase 100.0 1.1E-53 2.4E-58 509.1 37.5 380 126-529 30-444 (481)
15 PRK12566 glycine dehydrogenase 100.0 5.8E-54 1.3E-58 522.9 35.1 396 514-966 19-439 (954)
16 PRK05367 glycine dehydrogenase 100.0 2E-51 4.4E-56 514.3 37.5 402 512-966 14-437 (954)
17 PLN02414 glycine dehydrogenase 100.0 1.4E-48 2.9E-53 485.9 35.8 403 514-967 41-465 (993)
18 KOG2040 Glycine dehydrogenase 100.0 3.9E-43 8.5E-48 395.8 23.5 397 516-966 60-478 (1001)
19 PRK00451 glycine dehydrogenase 100.0 1.2E-38 2.6E-43 378.5 40.2 415 514-969 6-446 (447)
20 COG1003 GcvP Glycine cleavage 100.0 3.2E-39 6.9E-44 355.1 31.4 388 118-529 19-443 (496)
21 cd00613 GDC-P Glycine cleavage 100.0 4.3E-35 9.3E-40 342.8 37.6 375 150-527 1-398 (398)
22 cd00613 GDC-P Glycine cleavage 100.0 5E-34 1.1E-38 333.8 35.0 375 570-965 1-398 (398)
23 COG0520 csdA Selenocysteine ly 100.0 4.4E-31 9.5E-36 306.3 36.4 360 151-529 6-401 (405)
24 PRK09295 bifunctional cysteine 100.0 9.1E-26 2E-30 265.1 34.2 360 151-528 6-399 (406)
25 PRK13520 L-tyrosine decarboxyl 99.9 1.8E-25 3.8E-30 259.0 32.5 359 567-970 1-370 (371)
26 PRK10874 cysteine sulfinate de 99.9 1.1E-24 2.5E-29 255.3 36.2 362 148-529 4-394 (401)
27 COG0520 csdA Selenocysteine ly 99.9 8.2E-25 1.8E-29 254.0 33.9 315 627-970 61-404 (405)
28 TIGR03392 FeS_syn_CsdA cystein 99.9 9.4E-25 2E-29 255.8 34.6 356 152-529 5-391 (398)
29 PLN02855 Bifunctional selenocy 99.9 1.1E-24 2.4E-29 257.3 33.9 309 207-529 72-414 (424)
30 PLN03032 serine decarboxylase; 99.9 2.4E-24 5.1E-29 247.5 33.9 297 628-968 62-373 (374)
31 COG1104 NifS Cysteine sulfinat 99.9 1.2E-24 2.5E-29 244.1 30.4 310 630-975 42-381 (386)
32 PF00266 Aminotran_5: Aminotra 99.9 2.8E-25 6E-30 257.8 26.0 304 205-523 37-371 (371)
33 TIGR01788 Glu-decarb-GAD gluta 99.9 1.2E-23 2.5E-28 246.6 37.9 380 560-972 16-430 (431)
34 PLN02263 serine decarboxylase 99.9 5.2E-24 1.1E-28 247.8 33.6 296 629-972 130-444 (470)
35 KOG1383 Glutamate decarboxylas 99.9 4.5E-24 9.7E-29 238.2 29.3 372 559-974 54-449 (491)
36 PRK02769 histidine decarboxyla 99.9 1E-23 2.2E-28 243.8 32.8 299 629-972 62-373 (380)
37 COG1104 NifS Cysteine sulfinat 99.9 1.2E-23 2.5E-28 236.1 29.9 290 208-529 41-373 (386)
38 TIGR01979 sufS cysteine desulf 99.9 3E-23 6.4E-28 243.4 34.6 305 209-528 60-396 (403)
39 TIGR01814 kynureninase kynuren 99.9 2.8E-23 6.2E-28 244.0 31.2 293 222-528 80-402 (406)
40 TIGR01976 am_tr_V_VC1184 cyste 99.9 6.1E-23 1.3E-27 240.3 33.7 297 206-527 55-397 (397)
41 PLN02651 cysteine desulfurase 99.9 5.5E-23 1.2E-27 238.0 31.6 283 207-521 39-364 (364)
42 TIGR03812 tyr_de_CO2_Arch tyro 99.9 1.2E-22 2.6E-27 235.6 34.1 361 569-968 1-373 (373)
43 cd06453 SufS_like Cysteine des 99.9 1.5E-22 3.2E-27 235.0 34.7 307 205-527 37-373 (373)
44 COG0076 GadB Glutamate decarbo 99.9 3.3E-23 7.2E-28 243.2 28.7 333 565-938 35-404 (460)
45 COG0156 BioF 7-keto-8-aminopel 99.9 8.2E-24 1.8E-28 241.4 22.9 316 164-529 43-386 (388)
46 PLN02590 probable tyrosine dec 99.9 1.8E-22 3.9E-27 240.8 34.1 381 565-972 105-533 (539)
47 TIGR03402 FeS_nifS cysteine de 99.9 2E-22 4.3E-27 234.6 33.7 292 206-529 37-368 (379)
48 TIGR01977 am_tr_V_EF2568 cyste 99.9 5.8E-22 1.2E-26 230.2 34.3 301 207-528 40-374 (376)
49 PRK13520 L-tyrosine decarboxyl 99.9 6.7E-22 1.4E-26 229.1 32.8 343 147-528 1-366 (371)
50 PLN02880 tyrosine decarboxylas 99.9 8.3E-22 1.8E-26 235.0 32.0 386 565-974 57-487 (490)
51 PRK09295 bifunctional cysteine 99.9 2.7E-21 5.9E-26 227.2 32.8 311 630-970 65-403 (406)
52 TIGR01979 sufS cysteine desulf 99.9 3.4E-21 7.3E-26 226.1 33.4 313 631-972 61-402 (403)
53 TIGR03392 FeS_syn_CsdA cystein 99.9 7.4E-21 1.6E-25 222.9 33.3 311 630-971 58-395 (398)
54 cd06453 SufS_like Cysteine des 99.9 8.7E-21 1.9E-25 220.2 33.4 308 629-965 40-373 (373)
55 cd06450 DOPA_deC_like DOPA dec 99.9 7.8E-22 1.7E-26 226.3 24.0 293 626-967 32-344 (345)
56 PLN02855 Bifunctional selenocy 99.9 1.1E-20 2.3E-25 223.4 33.4 314 632-974 76-421 (424)
57 PRK10874 cysteine sulfinate de 99.9 1.3E-20 2.9E-25 220.9 33.9 312 629-971 60-398 (401)
58 PF00282 Pyridoxal_deC: Pyrido 99.9 1.4E-21 3E-26 225.8 24.8 312 560-889 11-354 (373)
59 cd06451 AGAT_like Alanine-glyo 99.9 7E-21 1.5E-25 219.5 30.0 312 629-969 29-355 (356)
60 TIGR02006 IscS cysteine desulf 99.9 3.2E-20 6.9E-25 217.9 34.5 288 210-529 46-373 (402)
61 TIGR01976 am_tr_V_VC1184 cyste 99.9 1.5E-20 3.2E-25 220.1 31.6 311 627-965 55-397 (397)
62 TIGR03403 nifS_epsilon cystein 99.9 2.3E-20 5.1E-25 217.5 32.5 288 210-529 41-371 (382)
63 PLN02724 Molybdenum cofactor s 99.9 1.4E-20 3E-25 237.6 32.4 351 156-529 28-484 (805)
64 COG0075 Serine-pyruvate aminot 99.9 1.6E-20 3.5E-25 212.5 29.1 325 170-529 8-359 (383)
65 TIGR03402 FeS_nifS cysteine de 99.9 4.7E-20 1E-24 214.6 33.9 309 630-974 40-375 (379)
66 PRK02948 cysteine desulfurase; 99.9 3.9E-20 8.5E-25 215.5 32.7 291 206-529 38-370 (381)
67 TIGR03812 tyr_de_CO2_Arch tyro 99.9 5.2E-20 1.1E-24 213.6 33.6 340 149-528 1-371 (373)
68 TIGR03799 NOD_PanD_pyr putativ 99.9 1E-19 2.2E-24 217.6 35.5 377 560-964 61-518 (522)
69 PRK13580 serine hydroxymethylt 99.9 2.3E-20 5E-25 217.9 29.2 307 630-972 93-446 (493)
70 PRK02948 cysteine desulfurase; 99.9 1E-19 2.3E-24 211.9 34.5 306 631-973 42-376 (381)
71 COG0112 GlyA Glycine/serine hy 99.9 1.1E-20 2.3E-25 208.6 24.1 337 580-971 32-390 (413)
72 PLN02955 8-amino-7-oxononanoat 99.9 7.4E-21 1.6E-25 221.9 24.0 312 164-529 106-457 (476)
73 PF00266 Aminotran_5: Aminotra 99.9 1.4E-20 3.1E-25 218.4 25.8 303 629-961 40-371 (371)
74 TIGR03403 nifS_epsilon cystein 99.9 2.3E-19 5E-24 209.2 35.6 308 634-975 44-379 (382)
75 PTZ00094 serine hydroxymethylt 99.9 5.5E-20 1.2E-24 218.8 30.4 304 632-974 79-411 (452)
76 PLN02409 serine--glyoxylate am 99.9 6.4E-20 1.4E-24 215.2 30.3 323 170-529 12-368 (401)
77 TIGR02006 IscS cysteine desulf 99.9 1.5E-19 3.3E-24 212.2 33.1 308 632-974 47-380 (402)
78 TIGR01977 am_tr_V_EF2568 cyste 99.9 1.3E-19 2.9E-24 210.4 31.8 306 630-967 42-375 (376)
79 KOG1359 Glycine C-acetyltransf 99.9 3.8E-21 8.3E-26 202.2 16.5 309 164-528 71-407 (417)
80 PLN02651 cysteine desulfurase 99.9 1.3E-19 2.9E-24 209.8 30.2 295 630-959 41-364 (364)
81 PRK03080 phosphoserine aminotr 99.9 1.3E-19 2.8E-24 210.9 28.8 296 210-529 47-369 (378)
82 COG4992 ArgD Ornithine/acetylo 99.9 1.2E-19 2.7E-24 203.3 27.3 320 589-974 51-401 (404)
83 PLN02271 serine hydroxymethylt 99.9 2.5E-19 5.4E-24 209.5 30.4 352 580-971 154-540 (586)
84 TIGR01814 kynureninase kynuren 99.9 2.1E-19 4.5E-24 211.3 30.1 295 643-969 80-405 (406)
85 cd06451 AGAT_like Alanine-glyo 99.9 2E-19 4.3E-24 207.5 28.8 295 209-528 30-352 (356)
86 PRK02769 histidine decarboxyla 99.8 5.8E-19 1.2E-23 204.4 31.0 280 208-529 62-368 (380)
87 PRK09331 Sep-tRNA:Cys-tRNA syn 99.8 6.6E-19 1.4E-23 205.7 30.8 305 633-971 64-381 (387)
88 TIGR01822 2am3keto_CoA 2-amino 99.8 2.4E-19 5.1E-24 209.7 26.5 312 168-529 46-385 (393)
89 TIGR02539 SepCysS Sep-tRNA:Cys 99.8 8.6E-19 1.9E-23 203.6 30.8 306 631-971 50-368 (370)
90 TIGR02326 transamin_PhnW 2-ami 99.8 9.8E-19 2.1E-23 202.4 31.2 317 630-970 33-361 (363)
91 PLN02409 serine--glyoxylate am 99.8 7.5E-19 1.6E-23 206.1 30.4 319 629-972 39-373 (401)
92 PRK14012 cysteine desulfurase; 99.8 2.3E-18 5.1E-23 202.3 34.3 311 632-975 49-383 (404)
93 PRK14012 cysteine desulfurase; 99.8 2.4E-18 5.3E-23 202.1 31.9 290 210-529 48-375 (404)
94 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 1.5E-18 3.1E-23 199.7 29.0 313 630-968 29-354 (355)
95 TIGR02326 transamin_PhnW 2-ami 99.8 2E-18 4.3E-23 199.9 28.9 319 171-529 7-358 (363)
96 PRK13479 2-aminoethylphosphona 99.8 4.5E-18 9.8E-23 197.2 31.9 315 631-971 36-363 (368)
97 TIGR03531 selenium_SpcS O-phos 99.8 2.8E-18 6.2E-23 200.4 30.1 366 560-968 29-443 (444)
98 TIGR01366 serC_3 phosphoserine 99.8 2.3E-18 5.1E-23 198.9 28.2 326 172-529 8-356 (361)
99 TIGR03235 DNA_S_dndA cysteine 99.8 5E-18 1.1E-22 195.7 30.8 262 207-500 38-319 (353)
100 TIGR01788 Glu-decarb-GAD gluta 99.8 6.6E-18 1.4E-22 198.2 31.8 344 139-529 15-425 (431)
101 PRK05937 8-amino-7-oxononanoat 99.8 1.8E-18 3.9E-23 200.9 26.4 316 165-529 9-346 (370)
102 PRK13479 2-aminoethylphosphona 99.8 1E-17 2.2E-22 194.3 32.5 320 170-529 8-359 (368)
103 TIGR02539 SepCysS Sep-tRNA:Cys 99.8 9.7E-18 2.1E-22 194.7 31.8 284 205-528 45-363 (370)
104 PLN03227 serine palmitoyltrans 99.8 2.3E-18 5E-23 201.2 26.7 310 164-529 2-378 (392)
105 PLN03032 serine decarboxylase; 99.8 7.3E-18 1.6E-22 194.0 30.2 283 207-529 62-372 (374)
106 TIGR01821 5aminolev_synth 5-am 99.8 1.4E-18 3E-23 204.1 24.8 314 164-529 49-392 (402)
107 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 8.5E-18 1.8E-22 193.3 30.6 317 177-528 7-352 (355)
108 PRK09331 Sep-tRNA:Cys-tRNA syn 99.8 7.8E-18 1.7E-22 196.7 30.1 284 207-529 59-377 (387)
109 cd00378 SHMT Serine-glycine hy 99.8 6.6E-18 1.4E-22 198.2 28.0 292 637-971 70-385 (402)
110 cd06452 SepCysS Sep-tRNA:Cys-t 99.8 1E-17 2.3E-22 193.8 29.1 301 634-969 46-360 (361)
111 PLN02483 serine palmitoyltrans 99.8 1.2E-17 2.5E-22 200.2 30.0 317 164-529 104-462 (489)
112 PRK07179 hypothetical protein; 99.8 4.7E-18 1E-22 199.9 25.6 310 165-529 59-394 (407)
113 PTZ00094 serine hydroxymethylt 99.8 5.8E-18 1.2E-22 201.5 26.3 283 210-529 78-404 (452)
114 PF00464 SHMT: Serine hydroxym 99.8 2.8E-18 6.1E-23 196.6 22.1 299 633-963 67-397 (399)
115 TIGR03811 tyr_de_CO2_Ent tyros 99.8 1.7E-17 3.8E-22 199.9 29.6 336 569-931 61-523 (608)
116 COG0436 Aspartate/tyrosine/aro 99.8 1.3E-17 2.9E-22 194.0 26.9 350 569-971 10-391 (393)
117 PRK13393 5-aminolevulinate syn 99.8 6.7E-18 1.5E-22 198.5 24.7 314 164-529 49-392 (406)
118 PLN03226 serine hydroxymethylt 99.8 4.4E-17 9.6E-22 193.7 31.7 309 637-975 85-423 (475)
119 PRK09064 5-aminolevulinate syn 99.8 9.5E-18 2.1E-22 197.3 24.9 314 164-529 50-393 (407)
120 PRK13392 5-aminolevulinate syn 99.8 1.5E-17 3.3E-22 195.7 25.7 312 166-529 52-393 (410)
121 TIGR01822 2am3keto_CoA 2-amino 99.8 2.2E-17 4.7E-22 193.2 26.6 296 628-972 79-390 (393)
122 PRK00011 glyA serine hydroxyme 99.8 4.6E-17 9.9E-22 192.1 28.6 292 637-971 76-389 (416)
123 cd00611 PSAT_like Phosphoserin 99.8 1.2E-17 2.6E-22 192.8 23.1 317 177-529 7-352 (355)
124 PRK13034 serine hydroxymethylt 99.8 5.5E-17 1.2E-21 190.9 28.6 297 632-970 70-391 (416)
125 COG3844 Kynureninase [Amino ac 99.8 5.1E-17 1.1E-21 174.2 25.0 298 215-528 80-397 (407)
126 COG0075 Serine-pyruvate aminot 99.8 1.5E-16 3.3E-21 180.4 29.8 313 630-972 36-364 (383)
127 TIGR01364 serC_1 phosphoserine 99.8 6.3E-17 1.4E-21 186.0 26.9 281 211-528 37-343 (349)
128 TIGR01437 selA_rel uncharacter 99.8 1.2E-16 2.6E-21 185.0 28.3 294 632-968 45-362 (363)
129 PRK05355 3-phosphoserine/phosp 99.8 4.7E-17 1E-21 187.9 24.8 318 171-529 7-354 (360)
130 cd00616 AHBA_syn 3-amino-5-hyd 99.8 4.7E-17 1E-21 187.1 24.4 301 633-966 19-352 (352)
131 PRK07179 hypothetical protein; 99.8 1.2E-16 2.5E-21 188.1 28.0 286 633-971 100-398 (407)
132 cd00609 AAT_like Aspartate ami 99.8 8.5E-17 1.9E-21 183.8 26.1 295 628-966 36-349 (350)
133 KOG1360 5-aminolevulinate synt 99.8 1.1E-17 2.4E-22 182.5 17.3 311 167-528 178-519 (570)
134 TIGR01821 5aminolev_synth 5-am 99.8 9E-17 2E-21 188.7 26.5 295 629-971 87-396 (402)
135 cd06454 KBL_like KBL_like; thi 99.8 9.5E-17 2.1E-21 184.3 25.5 275 207-528 42-346 (349)
136 PLN02822 serine palmitoyltrans 99.8 1.2E-16 2.6E-21 191.0 26.8 279 203-529 146-473 (481)
137 cd06454 KBL_like KBL_like; thi 99.8 9.4E-17 2E-21 184.3 24.6 288 632-968 46-348 (349)
138 cd06502 TA_like Low-specificit 99.8 3.8E-17 8.3E-22 186.8 21.3 287 634-967 34-337 (338)
139 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 3.1E-17 6.6E-22 188.8 20.3 265 211-518 66-416 (417)
140 PLN02721 threonine aldolase 99.8 1.1E-16 2.5E-21 184.0 25.1 292 634-970 42-351 (353)
141 COG0160 GabT 4-aminobutyrate a 99.8 7.1E-16 1.5E-20 178.2 31.3 331 590-972 66-446 (447)
142 KOG1549 Cysteine desulfurase N 99.7 1.7E-16 3.6E-21 179.1 25.0 205 592-813 47-257 (428)
143 PRK13034 serine hydroxymethylt 99.7 2.6E-16 5.7E-21 185.2 27.9 282 204-528 64-387 (416)
144 TIGR03235 DNA_S_dndA cysteine 99.7 4.5E-16 9.8E-21 179.5 29.3 270 631-935 41-319 (353)
145 PRK05937 8-amino-7-oxononanoat 99.7 2.3E-16 5E-21 183.3 26.7 291 625-973 49-352 (370)
146 KOG1549 Cysteine desulfurase N 99.7 2.3E-16 4.9E-21 178.1 25.2 286 211-529 85-414 (428)
147 PRK04073 rocD ornithine--oxo-a 99.7 5E-16 1.1E-20 182.1 29.3 314 592-969 52-395 (396)
148 TIGR03246 arg_catab_astC succi 99.7 8.4E-16 1.8E-20 180.2 30.9 287 634-971 79-395 (397)
149 cd06450 DOPA_deC_like DOPA dec 99.7 1.9E-16 4.2E-21 181.7 24.6 263 206-529 33-344 (345)
150 PRK13392 5-aminolevulinate syn 99.7 3.5E-16 7.5E-21 184.3 26.6 291 633-971 92-397 (410)
151 PRK15029 arginine decarboxylas 99.7 1.9E-16 4.1E-21 194.2 24.9 277 211-528 205-599 (755)
152 cd06452 SepCysS Sep-tRNA:Cys-t 99.7 1.7E-15 3.7E-20 175.4 31.5 279 211-528 44-357 (361)
153 PRK09064 5-aminolevulinate syn 99.7 3.9E-16 8.4E-21 183.7 26.6 293 631-971 90-397 (407)
154 PRK13393 5-aminolevulinate syn 99.7 5.1E-16 1.1E-20 182.6 27.3 293 632-972 90-397 (406)
155 PRK06108 aspartate aminotransf 99.7 6E-16 1.3E-20 180.3 27.6 301 627-969 60-380 (382)
156 TIGR03576 pyridox_MJ0158 pyrid 99.7 1.2E-15 2.6E-20 175.2 29.5 310 151-529 8-343 (346)
157 TIGR01141 hisC histidinol-phos 99.7 1.2E-16 2.5E-21 183.8 21.1 280 635-966 57-346 (346)
158 PRK03080 phosphoserine aminotr 99.7 3.8E-16 8.2E-21 181.9 25.4 308 632-974 48-376 (378)
159 PRK06939 2-amino-3-ketobutyrat 99.7 5.7E-16 1.2E-20 181.2 26.9 296 627-971 82-393 (397)
160 PRK05964 adenosylmethionine--8 99.7 6.6E-16 1.4E-20 182.5 27.6 335 592-971 54-422 (423)
161 PRK08114 cystathionine beta-ly 99.7 1E-15 2.2E-20 177.4 28.4 211 215-468 66-284 (395)
162 PRK05764 aspartate aminotransf 99.7 1.4E-15 3.1E-20 177.9 29.7 306 628-971 68-391 (393)
163 PRK15029 arginine decarboxylas 99.7 1E-15 2.3E-20 187.8 29.1 306 633-970 206-603 (755)
164 PRK00854 rocD ornithine--oxo-a 99.7 2.1E-15 4.5E-20 177.2 30.6 286 633-969 84-399 (401)
165 cd00609 AAT_like Aspartate ami 99.7 1.9E-15 4.1E-20 172.7 29.4 305 171-528 3-349 (350)
166 TIGR01825 gly_Cac_T_rel pyrido 99.7 8.7E-16 1.9E-20 179.1 27.0 295 627-971 73-381 (385)
167 PLN02483 serine palmitoyltrans 99.7 1.2E-15 2.5E-20 182.9 27.8 295 630-972 144-467 (489)
168 PRK05958 8-amino-7-oxononanoat 99.7 9.6E-16 2.1E-20 178.4 26.3 290 629-968 81-384 (385)
169 PRK06939 2-amino-3-ketobutyrat 99.7 1.2E-15 2.6E-20 178.5 27.0 278 204-528 80-388 (397)
170 PRK06943 adenosylmethionine--8 99.7 3.2E-15 7E-20 177.4 30.5 338 592-972 66-447 (453)
171 KOG2862 Alanine-glyoxylate ami 99.7 3E-15 6.5E-20 159.8 26.8 325 169-529 19-378 (385)
172 PRK06225 aspartate aminotransf 99.7 1.9E-15 4E-20 176.3 27.5 298 634-974 68-379 (380)
173 TIGR00858 bioF 8-amino-7-oxono 99.7 1.5E-15 3.2E-20 175.0 26.2 288 629-966 58-360 (360)
174 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 9.9E-17 2.1E-21 184.6 16.3 288 633-956 67-416 (417)
175 PRK06767 methionine gamma-lyas 99.7 1.4E-15 3.1E-20 177.4 26.3 272 214-527 64-383 (386)
176 cd00614 CGS_like CGS_like: Cys 99.7 4E-15 8.6E-20 172.8 29.5 214 212-468 41-261 (369)
177 COG0076 GadB Glutamate decarbo 99.7 2.7E-15 5.9E-20 176.7 28.2 328 139-502 31-403 (460)
178 PRK07678 aminotransferase; Val 99.7 3.4E-15 7.3E-20 177.4 29.3 344 592-972 59-450 (451)
179 PRK03244 argD acetylornithine 99.7 3.6E-15 7.9E-20 174.9 29.1 279 635-973 88-396 (398)
180 PLN00175 aminotransferase fami 99.7 3E-15 6.6E-20 176.3 28.3 346 573-969 43-411 (413)
181 PRK13580 serine hydroxymethylt 99.7 1.2E-15 2.7E-20 178.5 24.5 273 216-529 100-441 (493)
182 COG0161 BioA Adenosylmethionin 99.7 1.9E-15 4E-20 173.7 25.3 340 593-974 57-446 (449)
183 PRK07681 aspartate aminotransf 99.7 4.2E-15 9.1E-20 174.5 28.7 296 628-967 69-384 (399)
184 PRK05957 aspartate aminotransf 99.7 4.1E-15 8.8E-20 174.0 28.4 304 627-971 64-385 (389)
185 PRK13238 tnaA tryptophanase/L- 99.7 1E-14 2.2E-19 173.2 32.1 317 634-988 80-450 (460)
186 PLN02724 Molybdenum cofactor s 99.7 2.6E-15 5.7E-20 189.9 28.3 320 628-971 74-488 (805)
187 PRK05968 hypothetical protein; 99.7 1.6E-15 3.5E-20 177.1 24.3 273 213-528 65-385 (389)
188 PRK09028 cystathionine beta-ly 99.7 9.8E-15 2.1E-19 169.6 30.5 210 215-467 65-280 (394)
189 PRK00950 histidinol-phosphate 99.7 1.1E-15 2.4E-20 176.8 22.5 282 635-969 72-360 (361)
190 PRK07324 transaminase; Validat 99.7 4E-15 8.7E-20 173.1 26.9 291 636-970 66-369 (373)
191 TIGR03372 putres_am_tran putre 99.7 6.7E-15 1.4E-19 173.6 29.0 320 591-968 86-441 (442)
192 TIGR01437 selA_rel uncharacter 99.7 2.5E-15 5.3E-20 174.0 24.9 277 211-529 45-361 (363)
193 PRK07682 hypothetical protein; 99.7 2.4E-15 5.1E-20 175.3 24.8 335 590-971 21-376 (378)
194 PRK07482 hypothetical protein; 99.7 1.3E-14 2.8E-19 172.8 31.2 343 592-973 62-456 (461)
195 PRK03715 argD acetylornithine 99.7 1.2E-14 2.5E-19 170.1 30.3 319 593-972 49-394 (395)
196 TIGR01324 cysta_beta_ly_B cyst 99.7 4.2E-15 9.1E-20 172.5 26.3 211 214-467 53-269 (377)
197 PRK09082 methionine aminotrans 99.7 2.8E-15 6E-20 175.2 25.1 344 573-967 19-385 (386)
198 cd00616 AHBA_syn 3-amino-5-hyd 99.7 4.5E-15 9.7E-20 170.8 26.4 280 212-528 19-352 (352)
199 PRK08064 cystathionine beta-ly 99.7 8.6E-15 1.9E-19 171.0 28.9 273 213-529 56-382 (390)
200 PRK11522 putrescine--2-oxoglut 99.7 6.4E-15 1.4E-19 174.9 28.2 327 591-975 93-455 (459)
201 TIGR00858 bioF 8-amino-7-oxono 99.7 5.9E-15 1.3E-19 170.0 27.2 274 207-528 57-360 (360)
202 PRK01278 argD acetylornithine 99.7 8E-15 1.7E-19 171.5 28.6 288 634-971 75-388 (389)
203 TIGR01329 cysta_beta_ly_E cyst 99.7 5.4E-15 1.2E-19 172.0 26.8 242 213-498 49-317 (378)
204 PLN02624 ornithine-delta-amino 99.7 1.4E-14 3E-19 173.2 31.0 292 634-971 119-444 (474)
205 PRK12381 bifunctional succinyl 99.7 1.2E-14 2.7E-19 170.8 29.9 290 634-974 83-402 (406)
206 PLN03227 serine palmitoyltrans 99.7 7.1E-15 1.5E-19 171.9 27.5 295 633-972 44-383 (392)
207 PLN02955 8-amino-7-oxononanoat 99.7 4.4E-15 9.6E-20 173.7 25.4 299 628-973 143-463 (476)
208 PRK05965 hypothetical protein; 99.7 2.4E-14 5.1E-19 170.4 31.8 344 592-974 58-450 (459)
209 TIGR01328 met_gam_lyase methio 99.7 1E-14 2.2E-19 170.4 27.9 214 214-468 62-281 (391)
210 PLN02822 serine palmitoyltrans 99.7 1.1E-14 2.4E-19 174.2 28.9 299 628-972 150-478 (481)
211 PRK06290 aspartate aminotransf 99.7 1.1E-14 2.4E-19 171.3 28.3 306 628-972 81-406 (410)
212 PRK06207 aspartate aminotransf 99.7 1.1E-14 2.3E-19 171.3 28.2 305 628-973 78-404 (405)
213 PRK13578 ornithine decarboxyla 99.7 1.9E-15 4.1E-20 183.7 22.2 281 211-528 174-560 (720)
214 TIGR01885 Orn_aminotrans ornit 99.7 1.7E-14 3.6E-19 169.5 29.3 291 633-969 80-400 (401)
215 cd00615 Orn_deC_like Ornithine 99.7 6.3E-16 1.4E-20 174.0 16.6 166 633-814 60-236 (294)
216 PLN02263 serine decarboxylase 99.7 5.1E-14 1.1E-18 164.7 32.8 334 151-530 76-440 (470)
217 PRK06173 adenosylmethionine--8 99.7 1.1E-14 2.3E-19 171.9 27.1 333 592-973 56-427 (429)
218 TIGR03537 DapC succinyldiamino 99.7 1.1E-14 2.5E-19 167.8 26.5 298 628-967 36-349 (350)
219 PRK13360 omega amino acid--pyr 99.7 2.1E-14 4.5E-19 170.1 29.2 338 592-972 58-441 (442)
220 PRK06541 hypothetical protein; 99.7 5.2E-14 1.1E-18 167.5 32.4 340 592-973 64-457 (460)
221 PRK09221 beta alanine--pyruvat 99.7 4.1E-14 9E-19 167.7 31.3 339 592-972 61-444 (445)
222 PRK09105 putative aminotransfe 99.7 9.4E-15 2E-19 169.8 25.4 280 634-969 80-368 (370)
223 TIGR01825 gly_Cac_T_rel pyrido 99.7 1E-14 2.2E-19 170.1 25.8 277 205-529 72-377 (385)
224 PRK05942 aspartate aminotransf 99.7 1E-14 2.2E-19 171.0 25.7 297 627-969 72-387 (394)
225 PRK06916 adenosylmethionine--8 99.7 3.1E-14 6.8E-19 169.5 30.2 342 593-973 69-457 (460)
226 PRK07309 aromatic amino acid a 99.7 2.4E-14 5.2E-19 167.7 28.8 306 628-972 67-389 (391)
227 PRK02731 histidinol-phosphate 99.7 7.3E-15 1.6E-19 170.4 24.2 285 635-970 70-365 (367)
228 PRK14807 histidinol-phosphate 99.7 1.6E-14 3.4E-19 166.8 26.8 283 635-969 62-350 (351)
229 PRK05387 histidinol-phosphate 99.7 8.6E-15 1.9E-19 168.8 24.6 283 635-970 63-352 (353)
230 PRK08361 aspartate aminotransf 99.7 1.2E-14 2.6E-19 170.2 25.9 302 628-970 70-389 (391)
231 PRK13578 ornithine decarboxyla 99.7 1E-14 2.3E-19 177.3 26.1 309 633-971 175-565 (720)
232 TIGR01141 hisC histidinol-phos 99.7 3E-14 6.6E-19 163.8 28.8 298 172-528 25-346 (346)
233 PRK04635 histidinol-phosphate 99.7 4.9E-15 1.1E-19 171.1 22.1 281 635-967 63-351 (354)
234 PRK05630 adenosylmethionine--8 99.7 3.1E-14 6.7E-19 167.7 29.0 329 592-971 52-420 (422)
235 PRK05093 argD bifunctional N-s 99.7 4.9E-14 1.1E-18 165.7 30.7 286 635-971 85-400 (403)
236 cd06502 TA_like Low-specificit 99.7 8E-15 1.7E-19 167.7 23.4 271 213-528 34-336 (338)
237 PRK09264 diaminobutyrate--2-ox 99.7 8.6E-14 1.9E-18 164.5 32.5 330 592-978 51-423 (425)
238 PRK06234 methionine gamma-lyas 99.7 1.5E-14 3.3E-19 169.5 25.9 213 214-467 67-287 (400)
239 PRK07030 adenosylmethionine--8 99.7 5.1E-14 1.1E-18 167.7 30.6 339 592-972 59-447 (466)
240 PRK07582 cystathionine gamma-l 99.7 2.7E-14 5.8E-19 165.6 27.5 271 214-528 54-364 (366)
241 PLN02760 4-aminobutyrate:pyruv 99.6 7.9E-14 1.7E-18 167.2 31.9 341 592-973 101-493 (504)
242 PRK06105 aminotransferase; Pro 99.6 4.6E-14 1E-18 168.0 29.7 343 592-974 60-452 (460)
243 PRK08133 O-succinylhomoserine 99.6 2.2E-14 4.9E-19 167.5 26.6 213 213-468 63-281 (390)
244 PRK08742 adenosylmethionine--8 99.6 6.8E-14 1.5E-18 166.6 31.0 340 592-973 76-469 (472)
245 PRK07986 adenosylmethionine--8 99.6 4E-14 8.8E-19 166.8 28.8 331 592-971 55-423 (428)
246 PRK04612 argD acetylornithine 99.6 4.6E-14 9.9E-19 165.6 29.0 323 592-973 52-405 (408)
247 PRK05355 3-phosphoserine/phosp 99.6 6.5E-15 1.4E-19 170.2 21.4 297 631-970 47-357 (360)
248 TIGR01325 O_suc_HS_sulf O-succ 99.6 2.1E-14 4.6E-19 167.3 25.9 213 213-468 56-274 (380)
249 PRK08960 hypothetical protein; 99.6 4.2E-14 9.1E-19 165.3 28.4 298 627-968 68-381 (387)
250 COG0156 BioF 7-keto-8-aminopel 99.6 1.8E-14 3.8E-19 165.1 24.5 289 627-968 79-387 (388)
251 PRK05958 8-amino-7-oxononanoat 99.6 4.3E-14 9.2E-19 164.6 28.2 277 205-529 78-383 (385)
252 PRK08593 4-aminobutyrate amino 99.6 9.5E-14 2.1E-18 164.8 31.4 335 592-981 54-436 (445)
253 PRK07504 O-succinylhomoserine 99.6 2.8E-14 6.1E-19 167.1 26.5 212 214-468 68-286 (398)
254 PLN02590 probable tyrosine dec 99.6 9.5E-14 2.1E-18 166.3 31.3 358 139-529 101-528 (539)
255 COG0079 HisC Histidinol-phosph 99.6 3.5E-14 7.6E-19 162.9 26.5 284 634-971 59-354 (356)
256 TIGR00474 selA seryl-tRNA(sec) 99.6 4E-14 8.6E-19 167.0 27.6 273 211-527 122-453 (454)
257 PRK12414 putative aminotransfe 99.6 2.2E-14 4.8E-19 167.5 25.3 343 573-967 18-383 (384)
258 cd00378 SHMT Serine-glycine hy 99.6 2.5E-14 5.4E-19 168.0 25.7 277 211-529 64-381 (402)
259 PRK06176 cystathionine gamma-s 99.6 3.1E-14 6.8E-19 165.6 26.1 212 213-468 52-270 (380)
260 PRK11658 UDP-4-amino-4-deoxy-L 99.6 3.4E-14 7.4E-19 165.6 26.5 305 634-969 35-377 (379)
261 PRK06917 hypothetical protein; 99.6 1.4E-13 3E-18 163.4 31.9 344 592-974 43-440 (447)
262 TIGR03540 DapC_direct LL-diami 99.6 5.4E-14 1.2E-18 164.1 28.1 296 627-965 66-380 (383)
263 PRK04311 selenocysteine syntha 99.6 5.1E-14 1.1E-18 166.6 27.9 277 211-528 127-459 (464)
264 PRK08117 4-aminobutyrate amino 99.6 9.2E-14 2E-18 164.8 30.1 330 592-973 55-431 (433)
265 PLN02880 tyrosine decarboxylas 99.6 5.8E-14 1.3E-18 167.9 28.4 357 140-529 54-480 (490)
266 PRK08248 O-acetylhomoserine am 99.6 2.1E-14 4.5E-19 169.4 24.2 143 214-362 67-215 (431)
267 TIGR03588 PseC UDP-4-keto-6-de 99.6 4.5E-14 9.8E-19 164.7 26.8 304 634-968 31-379 (380)
268 PRK08912 hypothetical protein; 99.6 4.8E-14 1E-18 164.8 26.9 302 627-969 62-384 (387)
269 PRK08360 4-aminobutyrate amino 99.6 1.5E-13 3.2E-18 163.0 31.2 333 591-980 52-432 (443)
270 PRK07337 aminotransferase; Val 99.6 4.1E-14 8.9E-19 165.5 26.3 304 627-967 66-385 (388)
271 PRK08134 O-acetylhomoserine am 99.6 2.3E-14 4.9E-19 169.0 24.2 143 212-360 65-213 (433)
272 PF00155 Aminotran_1_2: Aminot 99.6 5E-15 1.1E-19 171.2 18.4 290 636-965 48-363 (363)
273 PRK05967 cystathionine beta-ly 99.6 4.7E-14 1E-18 163.8 26.3 210 215-467 68-283 (395)
274 PF01053 Cys_Met_Meta_PP: Cys/ 99.6 5.4E-14 1.2E-18 162.8 26.7 212 214-468 58-278 (386)
275 PRK01688 histidinol-phosphate 99.6 8.8E-15 1.9E-19 168.8 20.1 280 635-966 60-351 (351)
276 PRK01533 histidinol-phosphate 99.6 8.6E-15 1.9E-19 169.8 20.0 278 635-971 67-355 (366)
277 PRK00011 glyA serine hydroxyme 99.6 5.7E-14 1.2E-18 165.8 27.3 272 216-529 76-385 (416)
278 PRK07550 hypothetical protein; 99.6 7.2E-14 1.6E-18 163.3 27.9 350 571-968 15-384 (386)
279 PRK03158 histidinol-phosphate 99.6 3.6E-14 7.7E-19 164.1 25.0 282 635-968 67-358 (359)
280 PRK07777 aminotransferase; Val 99.6 5.7E-14 1.2E-18 164.2 27.0 298 628-968 61-383 (387)
281 PRK15400 lysine decarboxylase 99.6 3.4E-14 7.3E-19 172.8 25.7 301 633-971 196-559 (714)
282 PRK08068 transaminase; Reviewe 99.6 6.7E-14 1.5E-18 163.8 27.5 295 628-966 70-384 (389)
283 PRK05769 4-aminobutyrate amino 99.6 2.1E-13 4.7E-18 161.6 32.0 324 592-971 66-439 (441)
284 PRK08249 cystathionine gamma-s 99.6 6.2E-14 1.4E-18 164.0 27.1 213 213-468 66-284 (398)
285 PLN03026 histidinol-phosphate 99.6 4E-14 8.6E-19 165.1 25.4 284 635-968 89-379 (380)
286 PRK09276 LL-diaminopimelate am 99.6 7.1E-14 1.5E-18 163.3 27.4 295 628-965 69-382 (385)
287 TIGR01264 tyr_amTase_E tyrosin 99.6 1.2E-13 2.7E-18 162.2 29.4 307 628-971 73-399 (401)
288 PLN02242 methionine gamma-lyas 99.6 5.8E-14 1.3E-18 165.1 26.6 217 213-470 78-302 (418)
289 PRK08064 cystathionine beta-ly 99.6 2.3E-14 5E-19 167.4 23.0 279 634-967 56-382 (390)
290 cd00610 OAT_like Acetyl ornith 99.6 1.2E-13 2.7E-18 162.5 29.5 296 631-968 78-412 (413)
291 PRK07481 hypothetical protein; 99.6 1.4E-13 3.1E-18 163.4 30.0 340 592-972 54-446 (449)
292 PRK07810 O-succinylhomoserine 99.6 5.1E-14 1.1E-18 165.0 25.8 212 214-468 73-291 (403)
293 PLN02509 cystathionine beta-ly 99.6 4.5E-14 9.7E-19 167.0 25.5 212 213-468 135-353 (464)
294 PRK09148 aminotransferase; Val 99.6 1.1E-13 2.3E-18 163.0 28.6 310 627-974 67-393 (405)
295 PLN00145 tyrosine/nicotianamin 99.6 1.9E-13 4.2E-18 161.8 30.9 315 627-973 93-426 (430)
296 PTZ00125 ornithine aminotransf 99.6 2.4E-13 5.1E-18 159.7 31.5 292 633-973 74-397 (400)
297 PRK07050 cystathionine beta-ly 99.6 3.3E-14 7.2E-19 166.2 24.1 212 214-468 68-286 (394)
298 PRK07483 hypothetical protein; 99.6 2.7E-13 5.9E-18 160.7 32.1 344 592-974 42-440 (443)
299 PRK15407 lipopolysaccharide bi 99.6 9.2E-14 2E-18 164.4 28.0 372 568-970 2-435 (438)
300 TIGR00508 bioA adenosylmethion 99.6 1.4E-13 3.1E-18 162.5 29.4 298 634-971 90-426 (427)
301 TIGR02407 ectoine_ectB diamino 99.6 2.2E-13 4.7E-18 160.4 30.6 323 592-971 47-412 (412)
302 PRK08861 cystathionine gamma-s 99.6 4.5E-14 9.9E-19 164.2 24.3 217 634-896 55-280 (388)
303 PRK04870 histidinol-phosphate 99.6 7.2E-14 1.6E-18 161.5 25.8 282 635-968 66-355 (356)
304 PRK03321 putative aminotransfe 99.6 2.8E-14 6E-19 164.6 22.3 282 634-970 59-350 (352)
305 COG2008 GLY1 Threonine aldolas 99.6 2.9E-14 6.3E-19 157.5 21.2 292 630-969 33-341 (342)
306 PRK07812 O-acetylhomoserine am 99.6 6.2E-14 1.3E-18 165.2 25.4 141 215-361 73-220 (436)
307 PRK09028 cystathionine beta-ly 99.6 8E-14 1.7E-18 162.1 26.0 216 635-896 64-287 (394)
308 PRK09147 succinyldiaminopimela 99.6 1.6E-13 3.4E-18 161.0 28.7 333 590-969 30-394 (396)
309 PRK04013 argD acetylornithine/ 99.6 1.3E-13 2.9E-18 159.0 27.5 299 592-972 36-361 (364)
310 PRK07811 cystathionine gamma-s 99.6 2E-13 4.3E-18 159.5 29.3 213 213-468 63-282 (388)
311 PRK15399 lysine decarboxylase 99.6 6.7E-14 1.5E-18 170.2 26.0 271 211-528 195-554 (713)
312 PRK08861 cystathionine gamma-s 99.6 9.4E-14 2E-18 161.6 26.0 212 214-468 56-274 (388)
313 PRK08574 cystathionine gamma-s 99.6 9.2E-14 2E-18 162.0 25.9 212 213-468 55-273 (385)
314 PLN02187 rooty/superroot1 99.6 2.7E-13 5.9E-18 161.8 30.3 344 588-974 65-441 (462)
315 PRK06062 hypothetical protein; 99.6 2.5E-13 5.4E-18 161.4 29.8 329 592-974 65-448 (451)
316 PRK07480 putative aminotransfe 99.6 3E-13 6.5E-18 160.8 30.5 343 592-974 62-451 (456)
317 PRK15400 lysine decarboxylase 99.6 3.7E-14 8.1E-19 172.4 22.9 272 211-528 195-554 (714)
318 PRK08153 histidinol-phosphate 99.6 1.6E-13 3.5E-18 159.5 27.3 291 635-974 70-368 (369)
319 PRK06348 aspartate aminotransf 99.6 2.8E-13 6.1E-18 158.3 29.5 300 627-967 65-381 (384)
320 PRK06058 4-aminobutyrate amino 99.6 2.6E-13 5.6E-18 161.2 29.5 328 592-971 68-442 (443)
321 PRK06107 aspartate aminotransf 99.6 1.2E-13 2.7E-18 162.2 26.5 307 627-971 69-400 (402)
322 PRK12389 glutamate-1-semialdeh 99.6 2E-13 4.4E-18 161.5 28.4 318 592-971 65-427 (428)
323 KOG2862 Alanine-glyoxylate ami 99.6 1.8E-13 3.8E-18 146.4 24.9 314 630-972 48-383 (385)
324 cd00614 CGS_like CGS_like: Cys 99.6 9.9E-14 2.1E-18 161.2 25.4 210 634-889 42-257 (369)
325 PRK05639 4-aminobutyrate amino 99.6 3.5E-13 7.6E-18 160.2 30.4 331 592-974 65-446 (457)
326 PRK07495 4-aminobutyrate amino 99.6 4.1E-13 8.9E-18 158.5 30.8 330 592-973 52-423 (425)
327 TIGR01366 serC_3 phosphoserine 99.6 4.8E-14 1E-18 163.1 22.6 301 631-971 40-360 (361)
328 PRK05968 hypothetical protein; 99.6 6.4E-14 1.4E-18 163.7 23.7 283 634-972 65-387 (389)
329 COG0001 HemL Glutamate-1-semia 99.6 2.8E-13 6.1E-18 154.0 28.0 291 633-973 94-430 (432)
330 PLN02656 tyrosine transaminase 99.6 2.7E-13 5.9E-18 159.7 29.2 341 589-970 31-402 (409)
331 TIGR01328 met_gam_lyase methio 99.6 7.6E-14 1.7E-18 163.0 24.2 219 634-896 61-287 (391)
332 PRK06082 4-aminobutyrate amino 99.6 3.5E-13 7.5E-18 160.4 30.2 299 633-974 114-454 (459)
333 PLN02482 glutamate-1-semialdeh 99.6 1.2E-13 2.5E-18 164.4 25.9 289 634-971 141-473 (474)
334 PRK06702 O-acetylhomoserine am 99.6 2E-13 4.4E-18 160.1 27.5 144 213-362 63-213 (432)
335 TIGR03799 NOD_PanD_pyr putativ 99.6 3.7E-13 8E-18 161.5 30.2 289 211-526 129-518 (522)
336 COG0626 MetC Cystathionine bet 99.6 2E-13 4.4E-18 156.2 26.6 214 213-468 65-286 (396)
337 PRK13355 bifunctional HTH-doma 99.6 1.3E-13 2.9E-18 167.0 26.7 309 627-971 184-514 (517)
338 TIGR00709 dat 2,4-diaminobutyr 99.6 5.5E-13 1.2E-17 158.3 31.3 329 592-972 51-436 (442)
339 TIGR03531 selenium_SpcS O-phos 99.6 3E-13 6.5E-18 158.4 28.5 343 139-529 28-442 (444)
340 PLN03226 serine hydroxymethylt 99.6 1.3E-13 2.9E-18 164.1 25.9 283 217-529 86-415 (475)
341 PRK07503 methionine gamma-lyas 99.6 4.2E-13 9.1E-18 157.5 29.6 215 213-468 67-287 (403)
342 PTZ00433 tyrosine aminotransfe 99.6 2.2E-13 4.7E-18 160.7 27.3 308 628-973 75-410 (412)
343 PRK07504 O-succinylhomoserine 99.6 1.3E-13 2.8E-18 161.4 25.2 216 634-896 67-292 (398)
344 PRK07683 aminotransferase A; V 99.6 2.2E-13 4.8E-18 159.3 27.0 301 628-970 65-382 (387)
345 PRK05613 O-acetylhomoserine am 99.6 1.7E-13 3.6E-18 161.6 26.1 142 213-360 71-218 (437)
346 KOG2467 Glycine/serine hydroxy 99.6 2.3E-13 5E-18 148.0 24.8 354 580-975 46-430 (477)
347 PRK08247 cystathionine gamma-s 99.6 1.9E-13 4.1E-18 158.5 26.2 228 213-484 54-289 (366)
348 TIGR01365 serC_2 phosphoserine 99.6 2E-13 4.4E-18 157.4 26.1 294 210-528 38-368 (374)
349 TIGR01364 serC_1 phosphoserine 99.6 7.6E-14 1.7E-18 160.5 22.5 296 631-970 36-347 (349)
350 TIGR01329 cysta_beta_ly_E cyst 99.6 9.9E-14 2.1E-18 161.5 23.7 281 634-971 49-375 (378)
351 PLN00144 acetylornithine trans 99.6 5.6E-13 1.2E-17 155.4 30.0 317 592-971 27-380 (382)
352 PRK12403 putative aminotransfe 99.6 8.2E-13 1.8E-17 157.4 31.9 340 593-973 67-454 (460)
353 PRK07269 cystathionine gamma-s 99.6 2.4E-13 5.3E-18 157.2 26.7 237 213-493 56-301 (364)
354 PRK07671 cystathionine beta-ly 99.6 2.2E-13 4.7E-18 158.5 26.3 212 213-468 52-270 (377)
355 PRK08114 cystathionine beta-ly 99.6 8.9E-14 1.9E-18 161.3 22.7 217 634-896 64-290 (395)
356 PRK07505 hypothetical protein; 99.6 2.5E-13 5.4E-18 159.7 26.9 291 631-971 90-399 (402)
357 PRK07046 aminotransferase; Val 99.6 1.7E-13 3.8E-18 162.6 25.4 329 592-973 87-452 (453)
358 PRK07568 aspartate aminotransf 99.6 3.3E-13 7.2E-18 158.2 27.6 257 679-972 111-393 (397)
359 PRK07036 hypothetical protein; 99.6 1E-12 2.3E-17 156.6 32.0 344 592-974 63-455 (466)
360 TIGR00713 hemL glutamate-1-sem 99.6 2.7E-13 5.9E-18 160.4 26.9 319 593-971 61-422 (423)
361 PRK06938 diaminobutyrate--2-ox 99.6 9.3E-13 2E-17 156.9 31.4 330 592-972 75-461 (464)
362 KOG1402 Ornithine aminotransfe 99.6 2.2E-13 4.8E-18 146.4 23.2 332 574-969 59-425 (427)
363 PRK07366 succinyldiaminopimela 99.6 2.6E-13 5.6E-18 158.7 26.1 301 627-968 67-387 (388)
364 PRK10534 L-threonine aldolase; 99.6 5.6E-14 1.2E-18 160.7 20.1 282 634-969 36-331 (333)
365 TIGR01140 L_thr_O3P_dcar L-thr 99.6 2.2E-13 4.7E-18 155.9 24.8 270 635-966 50-330 (330)
366 PRK15399 lysine decarboxylase 99.6 5.3E-13 1.1E-17 162.5 29.2 300 633-970 196-558 (713)
367 PRK05994 O-acetylhomoserine am 99.6 3.3E-13 7.1E-18 159.4 26.7 153 214-375 66-224 (427)
368 PRK09792 4-aminobutyrate trans 99.6 1.1E-12 2.3E-17 155.0 31.0 327 592-970 52-420 (421)
369 COG1982 LdcC Arginine/lysine/o 99.6 1.9E-13 4.2E-18 160.0 24.2 306 634-966 72-403 (557)
370 COG2873 MET17 O-acetylhomoseri 99.6 3.2E-13 6.9E-18 148.2 24.2 140 216-361 67-212 (426)
371 PRK06084 O-acetylhomoserine am 99.6 2.3E-13 5.1E-18 160.3 24.9 154 215-377 62-221 (425)
372 COG1103 Archaea-specific pyrid 99.6 3.6E-13 7.8E-18 141.2 23.2 302 634-971 63-380 (382)
373 PRK02936 argD acetylornithine 99.6 9.3E-13 2E-17 153.4 29.7 276 632-968 71-376 (377)
374 PRK07908 hypothetical protein; 99.6 3.2E-13 7E-18 155.6 25.3 280 634-970 60-346 (349)
375 PRK06460 hypothetical protein; 99.6 7.8E-13 1.7E-17 153.9 28.6 213 212-467 46-264 (376)
376 PRK03317 histidinol-phosphate 99.6 3.4E-13 7.5E-18 156.6 25.7 289 629-970 66-363 (368)
377 PRK08045 cystathionine gamma-s 99.6 6.6E-13 1.4E-17 154.8 27.9 212 214-468 55-273 (386)
378 TIGR00707 argD acetylornithine 99.6 8.4E-13 1.8E-17 153.7 28.7 291 633-968 70-378 (379)
379 TIGR03576 pyridox_MJ0158 pyrid 99.6 2.8E-13 6E-18 155.7 24.3 281 629-968 51-344 (346)
380 PRK08776 cystathionine gamma-s 99.6 4.7E-13 1E-17 156.9 26.3 212 214-468 63-281 (405)
381 PLN02721 threonine aldolase 99.6 3E-13 6.5E-18 155.7 24.4 273 213-529 42-348 (353)
382 PLN00143 tyrosine/nicotianamin 99.6 8.8E-13 1.9E-17 155.4 28.8 360 572-971 17-404 (409)
383 PRK05613 O-acetylhomoserine am 99.6 7.2E-13 1.6E-17 156.3 27.9 269 634-967 71-374 (437)
384 PRK07582 cystathionine gamma-l 99.6 2.9E-13 6.4E-18 156.9 24.2 275 634-966 53-364 (366)
385 PRK07050 cystathionine beta-ly 99.6 2.5E-13 5.5E-18 158.8 23.7 286 634-971 67-391 (394)
386 PRK08363 alanine aminotransfer 99.6 5.4E-13 1.2E-17 156.6 26.6 306 628-971 70-394 (398)
387 PRK15481 transcriptional regul 99.6 6.1E-13 1.3E-17 157.9 27.1 286 637-969 126-429 (431)
388 PRK05166 histidinol-phosphate 99.6 6.5E-13 1.4E-17 154.5 26.7 283 636-969 75-369 (371)
389 TIGR01324 cysta_beta_ly_B cyst 99.6 3.9E-13 8.4E-18 156.2 24.7 216 635-896 53-276 (377)
390 PRK08056 threonine-phosphate d 99.6 5.8E-13 1.3E-17 154.0 25.9 283 635-969 58-353 (356)
391 PRK05994 O-acetylhomoserine am 99.6 1.2E-12 2.6E-17 154.6 28.9 270 634-966 65-363 (427)
392 PRK04311 selenocysteine syntha 99.6 6E-13 1.3E-17 157.5 26.2 291 634-970 129-463 (464)
393 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.6 7.6E-13 1.7E-17 154.1 26.9 305 634-969 33-374 (375)
394 KOG0257 Kynurenine aminotransf 99.6 4.9E-13 1.1E-17 149.4 23.7 298 571-910 17-344 (420)
395 COG1982 LdcC Arginine/lysine/o 99.6 2.1E-13 4.5E-18 159.7 21.7 276 212-528 71-403 (557)
396 PRK06149 hypothetical protein; 99.6 9E-13 1.9E-17 170.0 29.7 329 592-971 595-970 (972)
397 TIGR03538 DapC_gpp succinyldia 99.6 9.2E-13 2E-17 154.4 27.3 296 627-967 63-391 (393)
398 PRK02627 acetylornithine amino 99.6 2.4E-12 5.2E-17 150.9 30.7 288 633-971 82-394 (396)
399 PRK04781 histidinol-phosphate 99.6 9.6E-13 2.1E-17 152.7 27.1 285 635-970 62-362 (364)
400 PRK06777 4-aminobutyrate amino 99.5 1.8E-12 3.8E-17 153.1 29.6 322 592-969 52-419 (421)
401 TIGR02379 ECA_wecE TDP-4-keto- 99.5 1.1E-12 2.4E-17 152.6 27.4 304 634-969 33-375 (376)
402 TIGR01265 tyr_nico_aTase tyros 99.5 2.7E-12 5.7E-17 151.1 31.0 302 636-970 77-400 (403)
403 PRK07503 methionine gamma-lyas 99.5 6.6E-13 1.4E-17 155.8 25.8 212 634-889 67-283 (403)
404 PLN02509 cystathionine beta-ly 99.5 3.1E-13 6.7E-18 159.9 22.8 216 634-896 135-359 (464)
405 PRK08134 O-acetylhomoserine am 99.5 8.4E-13 1.8E-17 155.8 26.4 271 634-966 66-364 (433)
406 PRK06767 methionine gamma-lyas 99.5 3.4E-13 7.3E-18 157.5 22.9 284 634-970 63-384 (386)
407 TIGR01326 OAH_OAS_sulfhy OAH/O 99.5 1.2E-12 2.5E-17 154.6 27.5 142 214-361 60-207 (418)
408 PRK06234 methionine gamma-lyas 99.5 6.8E-13 1.5E-17 155.6 25.4 212 634-889 66-284 (400)
409 TIGR00474 selA seryl-tRNA(sec) 99.5 7.9E-13 1.7E-17 156.1 26.0 288 633-965 123-453 (454)
410 cd00611 PSAT_like Phosphoserin 99.5 2.2E-13 4.8E-18 157.4 20.9 296 631-968 43-353 (355)
411 PRK05939 hypothetical protein; 99.5 2.7E-12 5.9E-17 150.1 30.2 229 634-896 49-294 (397)
412 TIGR02080 O_succ_thio_ly O-suc 99.5 1.6E-12 3.5E-17 151.4 28.2 212 214-468 54-272 (382)
413 PRK08636 aspartate aminotransf 99.5 2.1E-12 4.6E-17 151.9 29.4 307 627-971 70-400 (403)
414 PRK06931 diaminobutyrate--2-ox 99.5 2.7E-12 5.8E-17 152.8 30.3 328 592-973 70-456 (459)
415 PRK00615 glutamate-1-semialdeh 99.5 7.2E-13 1.6E-17 156.4 24.9 328 592-974 65-431 (433)
416 PRK02731 histidinol-phosphate 99.5 2.4E-12 5.2E-17 149.4 28.9 265 214-529 70-362 (367)
417 COG3844 Kynureninase [Amino ac 99.5 1.9E-12 4.1E-17 139.5 25.6 309 630-973 74-404 (407)
418 PF01041 DegT_DnrJ_EryC1: DegT 99.5 4.8E-13 1E-17 155.1 23.0 303 633-966 26-363 (363)
419 PRK05939 hypothetical protein; 99.5 1.8E-12 3.8E-17 151.7 27.8 142 213-361 49-196 (397)
420 PLN02242 methionine gamma-lyas 99.5 5.1E-13 1.1E-17 157.1 23.4 261 634-967 78-348 (418)
421 PRK08249 cystathionine gamma-s 99.5 5.1E-13 1.1E-17 156.4 23.2 217 634-896 66-290 (398)
422 PRK06148 hypothetical protein; 99.5 1.1E-12 2.3E-17 169.4 28.3 328 592-972 634-1011(1013)
423 cd00615 Orn_deC_like Ornithine 99.5 4.8E-14 1E-18 158.7 14.0 153 212-378 60-236 (294)
424 PRK08776 cystathionine gamma-s 99.5 1.2E-12 2.6E-17 153.4 26.3 217 634-896 62-287 (405)
425 cd00617 Tnase_like Tryptophana 99.5 1.8E-12 3.9E-17 152.3 27.7 319 634-988 55-425 (431)
426 PRK08175 aminotransferase; Val 99.5 2E-12 4.4E-17 151.6 28.2 305 627-969 66-387 (395)
427 PRK08045 cystathionine gamma-s 99.5 7.3E-13 1.6E-17 154.4 23.7 217 634-896 54-279 (386)
428 PRK08248 O-acetylhomoserine am 99.5 9.2E-13 2E-17 155.5 24.8 268 634-966 66-364 (431)
429 COG0399 WecE Predicted pyridox 99.5 2.7E-12 5.9E-17 146.2 27.6 300 634-970 36-372 (374)
430 PRK09265 aminotransferase AlaT 99.5 2.8E-12 6.2E-17 150.8 28.9 301 636-971 76-401 (404)
431 TIGR01325 O_suc_HS_sulf O-succ 99.5 5.5E-13 1.2E-17 155.4 22.6 256 634-967 56-320 (380)
432 PRK07811 cystathionine gamma-s 99.5 9.9E-13 2.1E-17 153.6 24.7 214 634-896 63-288 (388)
433 PRK08133 O-succinylhomoserine 99.5 2.7E-13 5.8E-18 158.5 19.7 257 634-967 63-328 (390)
434 KOG0629 Glutamate decarboxylas 99.5 2.1E-13 4.5E-18 151.2 17.5 327 625-968 134-506 (510)
435 PRK06358 threonine-phosphate d 99.5 1.5E-12 3.2E-17 150.6 25.5 281 635-969 57-353 (354)
436 PRK08574 cystathionine gamma-s 99.5 4.9E-13 1.1E-17 155.9 21.6 258 634-967 55-322 (385)
437 KOG0053 Cystathionine beta-lya 99.5 7E-13 1.5E-17 149.9 22.0 160 215-383 81-247 (409)
438 PRK07812 O-acetylhomoserine am 99.5 2.4E-12 5.3E-17 151.8 27.2 271 634-966 71-368 (436)
439 TIGR00699 GABAtrns_euk 4-amino 99.5 3.7E-12 7.9E-17 150.9 28.6 284 636-968 109-463 (464)
440 PRK05839 hypothetical protein; 99.5 1.7E-12 3.6E-17 151.2 25.5 325 589-969 24-372 (374)
441 PRK02610 histidinol-phosphate 99.5 1.7E-12 3.7E-17 151.2 25.4 285 636-970 70-370 (374)
442 TIGR00700 GABAtrnsam 4-aminobu 99.5 1E-11 2.2E-16 146.9 31.9 325 592-969 45-418 (420)
443 PRK11658 UDP-4-amino-4-deoxy-L 99.5 1.8E-12 3.9E-17 151.2 25.2 287 213-528 35-374 (379)
444 PRK05664 threonine-phosphate d 99.5 2.8E-12 6E-17 146.8 26.2 272 635-972 52-329 (330)
445 PRK06434 cystathionine gamma-l 99.5 2.4E-12 5.2E-17 149.4 25.7 210 213-467 66-281 (384)
446 PRK05387 histidinol-phosphate 99.5 5E-12 1.1E-16 145.9 28.1 268 215-528 64-348 (353)
447 PTZ00377 alanine aminotransfer 99.5 7.6E-12 1.6E-16 150.5 30.7 314 628-974 115-478 (481)
448 TIGR03251 LAT_fam L-lysine 6-t 99.5 2.6E-12 5.7E-17 152.1 26.2 326 591-967 49-430 (431)
449 PRK06425 histidinol-phosphate 99.5 3.3E-12 7.1E-17 146.3 26.2 276 635-969 43-331 (332)
450 PRK08297 L-lysine aminotransfe 99.5 3.5E-12 7.7E-17 151.3 27.2 330 592-972 57-442 (443)
451 PRK06918 4-aminobutyrate amino 99.5 9.6E-12 2.1E-16 148.3 30.8 332 592-974 66-446 (451)
452 PLN02376 1-aminocyclopropane-1 99.5 5.7E-12 1.2E-16 151.5 29.1 308 627-973 93-440 (496)
453 cd01494 AAT_I Aspartate aminot 99.5 5.6E-13 1.2E-17 135.7 17.5 161 634-812 2-170 (170)
454 PRK06176 cystathionine gamma-s 99.5 9.9E-13 2.1E-17 153.1 21.7 209 634-889 52-266 (380)
455 PRK06836 aspartate aminotransf 99.5 3.9E-12 8.4E-17 149.2 26.7 302 628-971 73-391 (394)
456 PF00282 Pyridoxal_deC: Pyrido 99.5 1.8E-12 4E-17 150.2 23.3 312 139-482 10-372 (373)
457 PTZ00376 aspartate aminotransf 99.5 1.2E-12 2.7E-17 153.9 22.1 300 627-970 71-402 (404)
458 TIGR01326 OAH_OAS_sulfhy OAH/O 99.5 4.5E-12 9.8E-17 149.5 26.7 291 634-994 59-377 (418)
459 PRK00062 glutamate-1-semialdeh 99.5 3.3E-12 7.2E-17 151.2 25.6 294 634-972 92-425 (426)
460 PRK06225 aspartate aminotransf 99.5 1.6E-11 3.5E-16 143.2 30.9 304 171-529 33-372 (380)
461 PLN02271 serine hydroxymethylt 99.5 2.5E-12 5.5E-17 151.3 23.7 291 216-528 199-535 (586)
462 TIGR03588 PseC UDP-4-keto-6-de 99.5 3.2E-12 6.9E-17 149.2 24.7 289 213-528 31-377 (380)
463 PRK07590 L,L-diaminopimelate a 99.5 6.4E-12 1.4E-16 148.1 27.3 355 570-968 17-408 (409)
464 PRK07671 cystathionine beta-ly 99.5 2.1E-12 4.6E-17 150.2 22.2 252 634-966 52-315 (377)
465 PRK07865 N-succinyldiaminopime 99.5 3.2E-12 6.9E-17 148.3 23.6 284 628-966 62-363 (364)
466 PRK07810 O-succinylhomoserine 99.5 8.1E-13 1.8E-17 154.9 18.2 210 634-889 72-287 (403)
467 PRK14809 histidinol-phosphate 99.5 4.9E-12 1.1E-16 146.4 24.4 277 635-969 68-355 (357)
468 PRK06108 aspartate aminotransf 99.5 2.2E-11 4.7E-16 142.0 30.1 278 207-528 61-377 (382)
469 KOG1357 Serine palmitoyltransf 99.5 1.1E-12 2.4E-17 146.6 18.0 313 168-530 144-499 (519)
470 PRK00854 rocD ornithine--oxo-a 99.5 1.1E-11 2.4E-16 145.6 27.8 276 211-528 83-396 (401)
471 PRK07505 hypothetical protein; 99.5 2E-11 4.3E-16 143.6 29.8 275 209-528 89-394 (402)
472 PRK05967 cystathionine beta-ly 99.5 8.1E-12 1.7E-16 145.2 26.0 217 634-896 66-290 (395)
473 PRK06959 putative threonine-ph 99.5 9.3E-12 2E-16 143.0 25.6 273 635-974 56-336 (339)
474 KOG1404 Alanine-glyoxylate ami 99.5 2.3E-12 5E-17 142.1 19.5 322 592-965 62-432 (442)
475 PRK08088 4-aminobutyrate amino 99.5 2.1E-11 4.5E-16 144.4 29.3 328 592-972 53-424 (425)
476 PRK06460 hypothetical protein; 99.5 4.7E-12 1E-16 147.3 23.0 257 634-966 47-311 (376)
477 PRK03967 histidinol-phosphate 99.5 5.7E-12 1.2E-16 144.7 23.4 272 635-970 58-333 (337)
478 PRK06702 O-acetylhomoserine am 99.5 6.4E-12 1.4E-16 147.5 24.1 273 634-967 63-362 (432)
479 PF00155 Aminotran_1_2: Aminot 99.5 8E-12 1.7E-16 144.5 24.4 279 195-527 37-363 (363)
480 PRK05957 aspartate aminotransf 99.5 3.6E-11 7.8E-16 140.8 30.0 306 170-528 31-380 (389)
481 PRK06855 aminotransferase; Val 99.4 2.3E-11 5E-16 144.4 28.5 316 627-971 72-429 (433)
482 PLN02607 1-aminocyclopropane-1 99.4 2.5E-11 5.3E-16 144.3 28.6 310 627-974 94-440 (447)
483 COG2873 MET17 O-acetylhomoseri 99.4 4.2E-11 9.1E-16 131.7 27.2 275 636-970 66-366 (426)
484 PLN02231 alanine transaminase 99.4 2.5E-11 5.4E-16 146.9 28.4 315 627-974 167-530 (534)
485 PRK09275 aspartate aminotransf 99.4 8.9E-12 1.9E-16 149.1 24.1 282 678-974 188-520 (527)
486 KOG1383 Glutamate decarboxylas 99.4 1.7E-11 3.7E-16 138.3 24.7 354 139-529 54-442 (491)
487 PLN02450 1-aminocyclopropane-1 99.4 3.2E-11 6.9E-16 144.4 28.9 307 628-972 86-431 (468)
488 PRK06084 O-acetylhomoserine am 99.4 1.2E-11 2.6E-16 145.9 24.6 223 635-890 61-309 (425)
489 PRK09105 putative aminotransfe 99.4 4.5E-11 9.7E-16 139.1 29.0 266 213-528 80-365 (370)
490 PRK04260 acetylornithine amino 99.4 5.9E-11 1.3E-15 138.3 29.6 264 651-968 87-374 (375)
491 PRK03158 histidinol-phosphate 99.4 4.7E-11 1E-15 138.2 28.6 264 214-528 67-356 (359)
492 PRK07269 cystathionine gamma-s 99.4 1.3E-11 2.9E-16 142.8 23.9 214 634-896 56-278 (364)
493 TIGR03539 DapC_actino succinyl 99.4 1.5E-11 3.2E-16 142.4 24.2 283 627-965 55-356 (357)
494 TIGR03537 DapC succinyldiamino 99.4 7.4E-11 1.6E-15 136.2 29.9 264 217-528 42-348 (350)
495 COG1103 Archaea-specific pyrid 99.4 3E-11 6.6E-16 127.0 23.6 277 212-529 62-376 (382)
496 PRK08247 cystathionine gamma-s 99.4 1.3E-11 2.7E-16 143.4 23.3 209 634-889 54-268 (366)
497 TIGR02618 tyr_phenol_ly tyrosi 99.4 1.7E-11 3.8E-16 142.0 24.2 315 634-988 73-443 (450)
498 PF01041 DegT_DnrJ_EryC1: DegT 99.4 1.5E-11 3.2E-16 142.8 23.3 281 212-528 26-363 (363)
499 PRK14807 histidinol-phosphate 99.4 1.1E-10 2.5E-15 134.7 30.4 263 214-528 62-347 (351)
500 PRK07049 methionine gamma-lyas 99.4 3.4E-11 7.4E-16 142.2 26.5 211 215-468 87-315 (427)
No 1
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-239 Score=1974.41 Aligned_cols=956 Identities=69% Similarity=1.132 Sum_probs=915.1
Q ss_pred cccccccccCCCCccccccCCCCCHHHHHHHHHHhCCCCHHHhhhccCCCcc-ccCCCCCCCCCCCCCHHHHHHHHHHHh
Q 001531 83 QTRGISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLA 161 (1058)
Q Consensus 83 ~~~~~~~~~~~~~~~f~~~~i~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~sE~e~~~~~~~la 161 (1058)
.++++....+++.|+|.+|||||++.|+++||+++|++|+|+|++++||++| +++++.+| ++++|.|++++++.+|
T Consensus 37 ~~~~~~~~~~~~~d~F~~RHigp~~~dq~~ml~tlG~~dl~~l~~~~VP~~Ir~~~~l~~~---~~~~E~eml~~l~~ia 113 (1001)
T KOG2040|consen 37 ATRSQSERIFPPLDTFPRRHIGPSPTDQQQMLDTLGYKDLDELIEKTVPKSIRLKRPLKMD---KPLCESEMLQHLEDIA 113 (1001)
T ss_pred hhcchhhhccCcccccccccCCCCchHHHHHHHhcChhhHHHHHHhhcchhhcccchhcCC---CCcCHHHHHHHHHHHH
Confidence 3455556678889999999999999999999999999999999999999999 88899997 8999999999999999
Q ss_pred cCCcccccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHH
Q 001531 162 SMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAA 241 (1058)
Q Consensus 162 ~~n~~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ 241 (1058)
+||+.|++|+|+|||++.+|++|.||+++||+|||+|||||||||||+||.+++||+||++|||++.+|+||+|+|||++
T Consensus 114 ~kNk~~ksfIGmGYyn~~vP~~I~RNilenp~W~TqYTPYQ~EIsQGRLEsllNyQTmi~dlTGL~~aNASLLDEgTAaa 193 (1001)
T KOG2040|consen 114 SKNKIWKSFIGMGYYNTHVPAVILRNILENPGWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMANASLLDEGTAAA 193 (1001)
T ss_pred hhhhHHHHhhccccccccCcHHHHHHhhhCCcceeccCCCchhhhhhhHHHHhhhHHhhhhccCCcccchhhhccchhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhhccCCCEeEEEEEcCCCceeeccHHHHHHH
Q 001531 242 EAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDYKSGDVCGVLVQYPGTEGEVLDYGDFIKN 321 (1058)
Q Consensus 242 ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~~l~~l~~~t~~V~v~~pn~~G~i~dl~~I~~~ 321 (1058)
|||.|+.+.. ++++++|+..+||+++++++|+++++|++++..++.+.....+++++|+||||++.|.|.|..++++.
T Consensus 194 EAm~l~~~~~--krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~~~~~~~s~~~v~gvlvQYP~t~G~i~d~~el~~~ 271 (1001)
T KOG2040|consen 194 EAMALCNRIN--KRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSDIKEADYSSKDVSGVLVQYPDTEGSVLDFDELVEL 271 (1001)
T ss_pred HHHHHHHhhc--ccceEEecCCCCcchhhhhhccccccceeEEecCHHHhhccccceeEEEEEcCCCCCcccCHHHHHHH
Confidence 9999998875 68889999999999999999999999999988887655444567999999999999999999999999
Q ss_pred HHhcCcEEEEEeccccccCCCCCCcccceEEEecCcccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCccee
Q 001531 322 AHANGVKVVMATDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALR 401 (1058)
Q Consensus 322 a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~ 401 (1058)
+|+.|.++++++|+++|.+|++||+|||||++||+|+||+||||||||+|||+|++++.|.||||+||+|+|+.|+++|+
T Consensus 272 a~~~~s~vv~atDLLaLtiLrpPgefGaDIavGSsQRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~R 351 (1001)
T KOG2040|consen 272 AHANGSLVVMATDLLALTILRPPGEFGADIAVGSSQRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYR 351 (1001)
T ss_pred hhccCceEEEeehhhHHHccCChhhcCceeeeccccccCccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEe
Q 001531 402 VAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVK 481 (1058)
Q Consensus 402 l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~ 481 (1058)
|+||||||||||+||||||||+|+|+|+|+|+|+.|||++||++|++|++..+.+|+.+|+..| .++.+.++||++.|.
T Consensus 352 LALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~ag-hel~~k~fFDTLkI~ 430 (1001)
T KOG2040|consen 352 LALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAG-HELQHKPFFDTLKIR 430 (1001)
T ss_pred HHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcc-hhhccccccceEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999998 899988999999999
Q ss_pred cCC-HHHHHHHHHHcCceeeeccCCeEEEEeccCCCHHHHHHHHHHHhCCCCCCCCHHhhhhhhh-----ccCCCCccCC
Q 001531 482 CAD-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVE-----TAIPSGLTRE 555 (1058)
Q Consensus 482 ~~~-~~~l~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~al~~~~~~~~~~~~l~~~~~-----~~ip~~~~~~ 555 (1058)
+.. ++++.++..+++|+++.+++++|.+|++|+.+++|+|+|+++|..+ +..++..+.. ..+|+.++|+
T Consensus 431 ~~~s~~~~l~rA~~~~iNlr~~ed~tigvslDETv~~~DvddLl~vf~~~-----ss~~~~~E~~~~e~~~~~~s~f~Rt 505 (1001)
T KOG2040|consen 431 CGCSAEEVLDRAAKRQINLRLVEDGTIGVSLDETVTEKDVDDLLWVFNEE-----SSVELVAESMGEECNGIPPSVFKRT 505 (1001)
T ss_pred ecCcHHHHHHHHHhhcCceEEeecCceEEeecccccHHHHHHHHHHHccC-----ChHHHHHHhhhhhccCCCCcccccC
Confidence 987 8999999999999999999999999999999999999999999865 4444443221 2478999999
Q ss_pred CCCCCCCccCCCCCHHHHHHHHHHHhcCccCcCcccccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHH
Q 001531 556 SPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFN 635 (1058)
Q Consensus 556 ~~~~~~p~~~~~~sE~e~~r~~~~l~~~~~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~ 635 (1058)
++||++|+|+.++||++++|||++|.+||+++.++||||||||||+|+..++.|++|++|.++|||+|.|+.||+.+++.
T Consensus 506 s~~L~hpVFn~yhSEt~lvRYm~kLenKDlSLvhSMiPLGSCTMKLNsttEmmPiTwp~fanIHPF~P~eQaqGY~~lf~ 585 (1001)
T KOG2040|consen 506 SPYLTHPVFNSYHSETELVRYMKKLENKDLSLVHSMIPLGSCTMKLNSTTEMMPITWPEFANIHPFAPVEQAQGYQQLFT 585 (1001)
T ss_pred CccccchhhhhcccHHHHHHHHHHhhccchhhhhhcccccceeeeccccceeccccchhhccCCCCCchHHHhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCCCC
Q 001531 636 NLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNI 715 (1058)
Q Consensus 636 el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g~i 715 (1058)
+++++||++||+|..++|||+|++||+++|++||+|+.++|+++|+.||||.|+||+||++|+|+|++|+.|.++.+|.+
T Consensus 586 ~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~MagmkvvpV~~~~~G~i 665 (1001)
T KOG2040|consen 586 ELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVPVGCDANGNI 665 (1001)
T ss_pred HHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCEEEEeeccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCCeEEEEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEEeCCcccc
Q 001531 716 NIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTF 795 (1058)
Q Consensus 716 D~e~L~~~i~~~~~~taaV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~~s~hKtf 795 (1058)
|+.+|+++.++|+++++++|||||+++|+|+++|+++|+++|+||++||+||||+|+++|+++||++|+||+|+|+||||
T Consensus 666 d~~dLk~kaekh~~~Laa~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd~GaDV~HLNLHKTF 745 (1001)
T KOG2040|consen 666 DMVDLKAKAEKHKDNLAALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPGDIGADVCHLNLHKTF 745 (1001)
T ss_pred cHHHHHHHHHHhhhhhheeEEecccccccccccHHHHHHHHHhcCCEEEecCCCccceecccCCccccccceeeccccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHH
Q 001531 796 CIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIA 875 (1058)
Q Consensus 796 ~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~ 875 (1058)
|+|||+||||+|+|+|++|+.++||++.|.... ..+.....+.+++++||++++++++|+||++||..|+++.++.+
T Consensus 746 cIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~---~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~A 822 (1001)
T KOG2040|consen 746 CIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPG---RPEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKDASKIA 822 (1001)
T ss_pred eecCCCCCCCCCccchhhhccccCCCCCccCCC---CCCCCCCccceeccCCCcceeehhHHHHHHHhcccccchhhHHH
Confidence 999999999999999999999999999765321 11223456778888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCH
Q 001531 876 ILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESK 955 (1058)
Q Consensus 876 ~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~ 955 (1058)
++|||||+++|+.+|+++|.++++.+.||||+|+++||+..|+++.||+|||+|+|||+|+++||++++|||+|||++++
T Consensus 823 iLNaNYMakRLe~hYkil~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFHaPTmswPV~gtLMIEPTESE~k 902 (1001)
T KOG2040|consen 823 ILNANYMAKRLESHYKILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFHAPTMSWPVAGTLMIEPTESEDK 902 (1001)
T ss_pred hhhhHHHHHHHhhccceeEecCCcceeeeeeeechhhccccCCcHHHHHHHHHhccCCCCccccccCCceEeccCccccH
Confidence 99999999999999999999998999999999999999988999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCCccCCCCCCCCCccccccccCCcccCCccccCCcccccccC
Q 001531 956 EELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYG 1035 (1058)
Q Consensus 956 eeid~fi~aL~~i~~e~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1058)
+|+||||++|.+|.+|+++||+|..|++.|+||+|||++++|++|.||||||||+||||+||++++||||+|+||||+||
T Consensus 903 ~ElDRfcdAliSIreEI~~ie~G~~dk~~n~Lk~aPH~~~~v~s~~WdrpYsRE~AafP~p~lk~~KfWPtv~RvDd~YG 982 (1001)
T KOG2040|consen 903 AELDRFCDALISIREEIAQIEEGRQDKRNNPLKMAPHPLEDVTSDNWDRPYSREYAAFPAPFLKENKFWPTVGRVDDAYG 982 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCcccCcccCCCCCHHHhhhhccCCccchhhhcCCchhhhhcccCCcccccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCchhhhHHH
Q 001531 1036 DRNLICTLLPAAQVAEE 1052 (1058)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~ 1052 (1058)
||||+|||||+++|+..
T Consensus 983 D~nLvCTcppv~~~~~~ 999 (1001)
T KOG2040|consen 983 DRNLVCTCPPVEEYQSA 999 (1001)
T ss_pred ccceeeeCCCchhhhcc
Confidence 99999999999999743
No 2
>PRK12566 glycine dehydrogenase; Provisional
Probab=100.00 E-value=1e-216 Score=1944.48 Aligned_cols=942 Identities=55% Similarity=0.960 Sum_probs=880.4
Q ss_pred CCCCccccccCCCCCHHHHHHHHHHhCCCCHHHhhhccCCCcc-ccCCCCCCCCCCCCCHHHHHHHHHHHhcCCcccccc
Q 001531 92 LKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSF 170 (1058)
Q Consensus 92 ~~~~~~f~~~~i~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~sE~e~~~~~~~la~~n~~~~~~ 170 (1058)
+.+.|+|+.||||||++|+++||++||++|+||||+++||++| ++++|+|| +++||.|+++||++|++||+.+.+|
T Consensus 7 ~~~~~~f~~rh~g~~~~~~~~ML~~iG~~s~d~l~~~~iP~~ir~~~~l~lp---~~~sE~e~~~~~~~~a~kN~~~~~f 83 (954)
T PRK12566 7 LQEPDAFLRRHLGPDAAEQQAMLDALGVASRAELIEQTVPPAIRLNRPLDLP---AALDEQAALARLRGYAEQNQVWTSL 83 (954)
T ss_pred cccccchhhccCCCCHHHHHHHHHhcCccCHHHHhhccCCHHHhcCCCCCCC---CCCCHHHHHHHHHHHHhcCCCcccc
Confidence 5557889999999999999999999999999999988899999 88889998 7999999999999999999999999
Q ss_pred cCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhcc
Q 001531 171 IGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI 250 (1058)
Q Consensus 171 lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~ 250 (1058)
+|+|||+|++|++|+|+|++||+|||+|||||||+|||+||+|||||+||++|||||++|+||||++||++|||+|+.+.
T Consensus 84 iG~G~y~~~~P~vi~~~i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~~~ 163 (954)
T PRK12566 84 IGMGYHGTVTPTVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAKRV 163 (954)
T ss_pred ccccccCCcCcHHHHHHHHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHHHH
Confidence 99999999999999889999999999999999999999999999999999999999999999999999999999999887
Q ss_pred ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhhc-cCCCEeEEEEEcCCCceeeccHHHHHHHHHhcCcEE
Q 001531 251 QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKV 329 (1058)
Q Consensus 251 ~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~~l~~-l~~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~gall 329 (1058)
+++++++|+|++.+||+++++++||++..|+++++.+ ++. +++++++|+||+||++|.|+|+++|++++|++|+++
T Consensus 164 ~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~~~---~~~~~~~~~~~v~vq~P~~~G~i~d~~~i~~~~h~~gal~ 240 (954)
T PRK12566 164 AKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVVDA---VDNLAAHAVFGALLQYPDTHGEIRDLRPLIDQLHGQQALA 240 (954)
T ss_pred hhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEEcc---hhhcCCCCEEEEEEECCCCceEEccHHHHHHHHHHcCCEE
Confidence 6435789999999999999999999999999999744 444 567899999999999999999999999999999999
Q ss_pred EEEeccccccCCCCCCcccceEEEecCcccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccc
Q 001531 330 VMATDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQ 409 (1058)
Q Consensus 330 iV~a~~~slg~l~~p~~~GaDivvgs~k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq 409 (1058)
+|++|+++|+++++||+|||||+||++|+||+||+|||||+|||+++++++|+|||||||+|+|.+|+++|+|+||||||
T Consensus 241 ~~~~d~laL~ll~~Pge~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQ 320 (954)
T PRK12566 241 CVAADLLSLLVLTPPGELGADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQ 320 (954)
T ss_pred EEEeCHHHHhCCCChhhcCCcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecC-CHHHH
Q 001531 410 HIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA-DAHAI 488 (1058)
Q Consensus 410 ~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~-~~~~l 488 (1058)
|||||||||||||+|+|+|++|++|++|||++||++|+++++.+|+||+++|++.| +++...++|++|++++. .+.++
T Consensus 321 HIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g-~~~~~~~fF~~~~v~~~~~~~~~ 399 (954)
T PRK12566 321 HIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKG-IKRLNRHFFDTLTLEVGGAQAAI 399 (954)
T ss_pred HhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcC-CccccCCccceEEEEccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999987 99987799999999986 37889
Q ss_pred HHHHHHcCceeeeccCCeEEEEeccCCCHHHHHHHHHHHhCCCCCCCCHHhhhhh-hhccCCCCccCCCCCCCCCccCCC
Q 001531 489 ASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEE-VETAIPSGLTRESPYLTHPVFNKY 567 (1058)
Q Consensus 489 ~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~al~~~~~~~~~~~~l~~~-~~~~ip~~~~~~~~~~~~p~~~~~ 567 (1058)
.++..++||+++.++++.+.+|++|++|.+|++.++++|...... .+.+.+... ....||+.++|++++++||+|+++
T Consensus 400 ~~~a~~~~~n~r~~~~~~~~~s~de~~~~~~~~~~~~~f~~~~~~-~~~~~~~~~~~~~~~p~~~~r~~~~~~~p~f~~~ 478 (954)
T PRK12566 400 IESAEAARINLRILGRGRLGVSLDETCDEATVARLFDIFLGADHG-LDVAALDQGALAEGIPAVLQRRTAYLQHPVFNAH 478 (954)
T ss_pred HHHHHHCCCeeEEeCCCeEEEEeCCCCCHHHHHHHHHHhcCCCcc-cchhhhccccccccCchhhhcCCccccCcccccC
Confidence 899999999999998899999999999999999999999632111 011112110 112499999999999999999999
Q ss_pred CCHHHHHHHHHHHhcCccCcCcccccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCC
Q 001531 568 HTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGF 647 (1058)
Q Consensus 568 ~sE~e~~r~~~~l~~~~~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~ 647 (1058)
+||.||+|||++|++||++++++||||||||||+|++.+++|++|+||++.|||||.|++||++|+++|+|+++|+||||
T Consensus 479 ~SE~el~r~~~~La~kn~~~~~~~~~LGsCTmK~n~~~~~~p~s~~eF~t~hPyqp~e~sQG~lq~i~elq~~l~eLtGm 558 (954)
T PRK12566 479 HSETEMLRYLKQLENKDLALNQSMIPLGSCTMKLNATSEMIPITWPEFAQLHPFAPREQAEGYRAMIDELEAWLCAITGF 558 (954)
T ss_pred CCHHHHHHHHHHHHhcCcCcccCcccCcccccCcCcHHhhhcccchhhhcCCCCCchhhhcCHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCCCCCHHHHHHHHHhc
Q 001531 648 DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEAN 727 (1058)
Q Consensus 648 ~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g~iD~e~L~~~i~~~ 727 (1058)
+.+++++++|++||++++|++|.||.++|+.+|++||+|.++|++||.++.+.|++++.|++|++|.+|+++|+++++++
T Consensus 559 d~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D~~G~iDle~L~a~I~~~ 638 (954)
T PRK12566 559 DAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVVIVECDPDGNVDLDDLKAKAAAA 638 (954)
T ss_pred CeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHhhcc
Confidence 99999999999999999999999999999888999999999999999999999999999999999999999999999877
Q ss_pred CCCeEEEEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEEeCCccccccCCCCCCCcee
Q 001531 728 RDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMG 807 (1058)
Q Consensus 728 ~~~taaV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~~s~hKtf~~P~g~GGPg~G 807 (1058)
++++++|++++||++|++++++++|+++||++|++|++||+|+++++++..|+++|+||+++++||||++|||+|||++|
T Consensus 639 ~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG 718 (954)
T PRK12566 639 GDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPADIGADVSHMNLHKTFCIPHGGGGPGMG 718 (954)
T ss_pred CCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhhcCCCEEEecCCcccCcCccCCCCccc
Confidence 89999999999999999986799999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCCCCCcccCCCC-CCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHH
Q 001531 808 PIGVKKHLAPFLPSHPVVSTGGI-PAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRL 886 (1058)
Q Consensus 808 ~i~~~~~l~~~lpg~~vg~~~d~-g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L 886 (1058)
++++++++.+++|+... .|. |.+.+.++++++| +|+++++.+||+||.+||.+ +++.++.++.+|+|++++|
T Consensus 719 ~iav~~~L~pfLp~~P~---~d~~G~~~r~ga~S~~~---~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL 791 (954)
T PRK12566 719 PIGVRAHLAPFVANHPV---VPVEGPDPNNGAVSAAP---WGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQL 791 (954)
T ss_pred hhhhhhhhhhhccCCCC---cCCCCCCCCCCceeecc---cchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHh
Confidence 99999998888876532 111 2233344444554 57999999999999999999 9999999999999999999
Q ss_pred hccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q 001531 887 EKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALI 966 (1058)
Q Consensus 887 ~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~ 966 (1058)
++.+++.|.+++++++|||++++..+++..|++..+|+++|.++||++++++||++++|||||||+++++|||+|+++|+
T Consensus 792 ~~~~~v~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d~Gihapt~~fPv~~~LmIepTE~eskeEIDrf~eAL~ 871 (954)
T PRK12566 792 GGAFPVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESKAELDRFVEAML 871 (954)
T ss_pred HhhCCCCcCCCCCCeeeEEEEEccccccccCCCHHHHHHHHHHCCcEEeEEeeccCCEEEEEeeeeCCHHHHHHHHHHHH
Confidence 98888888665568999999999877655678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCcccccCCCCCCccCCCCCCCCCccccccccCCcccCCccccCCcccccccCCCccccccCch
Q 001531 967 SIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLPA 1046 (1058)
Q Consensus 967 ~i~~e~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1058)
+|.+|+++|++|+||+++|+|||||||+.+|++ +|+||||||+||||++|++++||||||+||||+||||||+|+|||+
T Consensus 872 ~I~~e~~~v~~g~~~~~~n~l~~apht~~~~~~-~w~~~y~r~~a~~p~~~~~~~k~wp~v~r~d~~~gdrnl~c~c~~~ 950 (954)
T PRK12566 872 SIRAEIGKVQEGNWPAEDNPLKRAPHTLADVTG-VWQRPYSIEQAVTPSAHARAHKYWPAVNRVDNVYGDRNLFCACVPV 950 (954)
T ss_pred HHHHHHHHHHcCCCCcccCcccCCCCchHHhhc-cCCCCcChhhcccCCCcccCCCcCCCcCCcCccccccccccCCCCh
Confidence 999999999999999999999999999999998 8999999999999999999999999999999999999999999999
Q ss_pred hhh
Q 001531 1047 AQV 1049 (1058)
Q Consensus 1047 ~~~ 1049 (1058)
|+|
T Consensus 951 ~~~ 953 (954)
T PRK12566 951 DDY 953 (954)
T ss_pred hhc
Confidence 987
No 3
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=100.00 E-value=3.9e-210 Score=1902.33 Aligned_cols=935 Identities=59% Similarity=1.001 Sum_probs=878.9
Q ss_pred cCCCCCHHHHHHHHHHhCCCCHHHhhhccCCCcc-ccCCCCCCCCCCCCCHHHHHHHHHHHhcCCcccccccCCCCCCCC
Q 001531 101 RHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTH 179 (1058)
Q Consensus 101 ~~i~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~sE~e~~~~~~~la~~n~~~~~~lG~g~~~~~ 179 (1058)
|||||+++|+++||++||++|+||||+++||++| ++++++|| +++||.|+++||++|+++|+.+.+|+|+|+|+|+
T Consensus 1 rh~g~~~~~~~~ML~~iG~~s~d~l~~~~iP~~i~~~~~l~lp---~~~sE~e~~~~~~~la~~N~~~~~fig~G~y~~~ 77 (939)
T TIGR00461 1 RHLGPSPSDQKKMLKTMGYSDLNALIEQLVPPNILKRRPLQLE---APSKEYEALAHLKKIASKNHKFKSYIGMGYYGTI 77 (939)
T ss_pred CCCCcCHHHHHHHHHhcCCCCHHHHhhccCCHHHhcCCCCCCC---CCCCHHHHHHHHHHHHhcCCCccccCCCCcCCCc
Confidence 8999999999999999999999999999999999 88889998 7899999999999999999999999999999999
Q ss_pred ChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEE
Q 001531 180 VPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFI 259 (1058)
Q Consensus 180 ~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vl 259 (1058)
+|++|+|++++||+|||+|||||||+|||+||+|+|||+|+++||||+.+|+||+|++|+++|||+||.+..++++++||
T Consensus 78 ~p~~i~r~v~~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vl 157 (939)
T TIGR00461 78 LPPVIQRNLLENPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVSKKKANKFF 157 (939)
T ss_pred CChHHHHHHHhCchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999875534568999
Q ss_pred EcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhhc-cCCCEeEEEEEcCCCceeeccHHHHHHHHHhcCcEEEEEeccccc
Q 001531 260 IASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLAL 338 (1058)
Q Consensus 260 v~~~~Hps~~~~~~~~a~~~gi~v~~v~~~~l~~-l~~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~sl 338 (1058)
|++.+||+++.+++|+++..|++++++|.++|+. + ++++|++|+||++|.++|+++|++++|++|++++|++|++++
T Consensus 158 v~~~~hP~~~~v~~t~a~~~g~~v~~~~~~~l~~~~--~~~~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~al 235 (939)
T TIGR00461 158 VAKDLHPQTKSVLHTRAKPFGIEVIVVDCSDIKKAV--DVFGCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLMAL 235 (939)
T ss_pred ECCCCCcchHHHHHHHHHhcCcEEEEEcHHHHhhcC--CEEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechHHh
Confidence 9999999999999999999999999999988876 5 689999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccceEEEecCcccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCC
Q 001531 339 TILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATS 418 (1058)
Q Consensus 339 g~l~~p~~~GaDivvgs~k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTs 418 (1058)
+++++||+|||||+|+++|+||+||+|||||+|||+|+++++|+||||+||+|+|.+|+++|+|+|||||||||||||||
T Consensus 236 ~ll~~Pge~GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtS 315 (939)
T TIGR00461 236 TLLTPPGHYGADIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATS 315 (939)
T ss_pred CCcCCHHHcCCcEEeeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecC--CHHHHHHHHHHcC
Q 001531 419 NICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA--DAHAIASAAYKIE 496 (1058)
Q Consensus 419 ni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~--~~~~l~~~L~~~G 496 (1058)
||||+|+|++++|++|+.+||++||++|+++++.+++||+++|++.| +++..+++|++|+|+++ .+.++.++|.++|
T Consensus 316 NICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G-~~~~~~~fF~~~~v~~~~~~~~~i~~~~~~~g 394 (939)
T TIGR00461 316 NICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDP-HELINKTWFDTLTVKVGNGISSELLKAAEEFN 394 (939)
T ss_pred chhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCccceEEEEeCCCCHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999988 99987799999999987 3889999999999
Q ss_pred ceeeeccCCeEEEEeccCCCHHHHHHHHHHHhCCCCCCCCHHhhhhhhhccCCCCccCCCCCCCCCccCCCCCHHHHHHH
Q 001531 497 MNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRY 576 (1058)
Q Consensus 497 I~~~~~~~~~lris~~~~~t~edid~ll~al~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~~~~p~~~~~~sE~e~~r~ 576 (1058)
|+++...++.+++|+||++|++||+.|+++|........+.+.+.+.+...||+.++|+++++++|+|++++||.||+||
T Consensus 395 i~l~~~~~~~i~~s~~E~~t~~di~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~f~~~~sE~e~~r~ 474 (939)
T TIGR00461 395 INLRAVDTTTVGIALDETTTKADVENLLKVFDGEDNHGLSSQFLSEDVSNSFPREFQRTDEILRNEVFNMYHSETEMLRY 474 (939)
T ss_pred CeeeecCCCEEEEEeecCCCHHHHHHHHHHhcCCCccccchhhhhhhhcccCchhhhccCcccCCcccccCCCHHHHHHH
Confidence 99988767899999999999999999999996321100011111111112499999999999999999999999999999
Q ss_pred HHHHhcCccCcCcccccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCCceeeecCc
Q 001531 577 IHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNA 656 (1058)
Q Consensus 577 ~~~l~~~~~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~~~~l~~~s 656 (1058)
|++|++||++++++|+++||||||+|+.+++++++|++|++||||||.+++||++|+++|+|+|+|++|||+.+++++++
T Consensus 475 ~~~L~~kn~~~~~~fi~lGsctmk~na~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~eltGmd~~Sl~p~a 554 (939)
T TIGR00461 475 LHRLESKDLALNNSMIPLGSCTMKLNATAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSITGFDAISLQPNS 554 (939)
T ss_pred HHHHHhcCCCccccCCCCccCCCccCHHHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHHHCCCCcccCCch
Confidence 99999999999999999999999999999999999999999999999779999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEE
Q 001531 657 GAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMV 736 (1058)
Q Consensus 657 Ga~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~v 736 (1058)
||+||+++|+++|.||+++|+++|++|++|.++||+||+++.+.|++++.|++|++|.+|+++|++++++++++|++||+
T Consensus 555 GA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d~~G~iDle~L~~~i~~~~~~taaV~i 634 (939)
T TIGR00461 555 GAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVPVNCDQDGNIDLVDLKNKAEQHGDELAAVMV 634 (939)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhhcCCceEEEEE
Confidence 99999889999999999999888999999999999999999999999999999999999999999999877789999999
Q ss_pred EcCCCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCC
Q 001531 737 TYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLA 816 (1058)
Q Consensus 737 t~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~ 816 (1058)
++||++|+++++|++|+++||++|++++|||||+++++++.+|+++|+|++++|.||+|++|||+||||+|++++++++.
T Consensus 635 T~pst~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~ 714 (939)
T TIGR00461 635 TYPSTHGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLI 714 (939)
T ss_pred EeCCcCceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhch
Confidence 99999999996699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeecc
Q 001531 817 PFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRG 896 (1058)
Q Consensus 817 ~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g 896 (1058)
+++||+.++.+.|. .+++...+.+++.++|++++++++|+||++||.+|++++++.++++|+||+++|++.++++|++
T Consensus 715 ~~lPg~~v~~t~d~--~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~~~~l~~~ 792 (939)
T TIGR00461 715 PFLPKHDVVSMITG--IGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDHYPILFVG 792 (939)
T ss_pred hhcCCCcccccccC--CCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhccCcccccC
Confidence 99999988765332 0133333444444678999999999999999999999999999999999999999999999987
Q ss_pred CCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 001531 897 VNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIE 976 (1058)
Q Consensus 897 ~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~~~~ 976 (1058)
+.++++|||++++++++++.|++..+|+|+|+++|||+++++||+.++++|+|||.+|++|||+|+++|.+|.+|+++|+
T Consensus 793 ~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~~~~~ 872 (939)
T TIGR00461 793 TLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEEINALV 872 (939)
T ss_pred CCCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeeccccCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 66789999999998777777899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcccccCCCCCCccCCCCCCCCCccccccccCCcccCCccccCCcccccccCCCcccccc
Q 001531 977 NGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTL 1043 (1058)
Q Consensus 977 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1058)
+|+||++||+|||||||+.+|++++|+||||||+||||++|++++||||||+||||+||||||+|+|
T Consensus 873 ~g~~~~~~~~l~~ap~~~~~~~~~~w~~~y~r~~a~~p~~~~~~~k~wp~v~r~d~~~gd~nl~c~c 939 (939)
T TIGR00461 873 AGQPKGQDNPLKNAPHSLQSLITSEWWHPYSREEAAYPAPFLRYNKFWPTVARLDDTYGDRNLICSC 939 (939)
T ss_pred cCCCCCCcchHhhCCCCHHHhhcCCCCCCcChhhccCCCcccccCCcCCCcCCccccccccccccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999
No 4
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=100.00 E-value=1.4e-203 Score=1869.00 Aligned_cols=962 Identities=86% Similarity=1.357 Sum_probs=888.7
Q ss_pred CCCccccccCCCCCHHHHHHHHHHhCCCCHHHhhhccCCCccccCCCCCCCCCCCCCHHHHHHHHHHHhcCCcccccccC
Q 001531 93 KPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIG 172 (1058)
Q Consensus 93 ~~~~~f~~~~i~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~~~~~~~lp~~~~~~sE~e~~~~~~~la~~n~~~~~~lG 172 (1058)
.+.|.|..||||||++|+++||++||++|+||||+++||++|++++|+||.+.+++||.|+++||++|+.+|+.+.+|+|
T Consensus 30 ~~~~~f~~r~i~~~~~~~~~ML~~ig~~s~d~l~~~~iP~~i~~~~l~lp~~~~~~sE~e~~~~~~~la~kN~~~~~fiG 109 (993)
T PLN02414 30 KPSDTFPRRHNSATPEEQKAMAEYCGFDSLDALIDATVPKSIRLDSMKLSKYDEGLTESQMLEHMKSLASKNKVFKSYIG 109 (993)
T ss_pred ccccchhhccCCcCHHHHHHHHHhcCccCHHHHhhccCCHHHhcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCccccccC
Confidence 34568999999999999999999999999999998889999955578886333689999999999999999999999999
Q ss_pred CCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhcccc
Q 001531 173 MGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQK 252 (1058)
Q Consensus 173 ~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~ 252 (1058)
+|+|+|++|++|.+++++|++|||+|||||||+|||+||+++|||+|||+|+||+++|+||+|++|+++|+++|+.++.+
T Consensus 110 ~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~~ 189 (993)
T PLN02414 110 MGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNILK 189 (993)
T ss_pred CCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhccc
Confidence 99999999999988999999999999999999999999999999999999999999999999999999999999987754
Q ss_pred CCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhhccCCCEeEEEEEcCCCceeeccHHHHHHHHHhcCcEEEEE
Q 001531 253 GKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDYKSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMA 332 (1058)
Q Consensus 253 ~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~~l~~l~~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~ 332 (1058)
+++++|||++.+||+++.+|++++++.|+++++++.++....++++.++++|+||++|.+.|+++|+++||++|++++|+
T Consensus 190 g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~~~~~~~v~~vlvq~P~~~G~v~dv~~I~~~ah~~GaL~iVa 269 (993)
T PLN02414 190 GKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDFDYSSGDVCGVLVQYPATDGEVLDYAEFVKNAHANGVKVVMA 269 (993)
T ss_pred CCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhhccccCceEEEEEecCCCCeEEcCHHHHHHHHHHcCCEEEEE
Confidence 45689999999999999999999999999999999865322345788899999999999999999999999999999999
Q ss_pred eccccccCCCCCCcccceEEEecCcccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeeccccccccc
Q 001531 333 TDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIR 412 (1058)
Q Consensus 333 a~~~slg~l~~p~~~GaDivvgs~k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~ir 412 (1058)
+|+++++.+++|+++||||+++++|+|++|+|||||++|||++++++.|++|||++|+|+|.+|+++|+++|||||||||
T Consensus 270 ad~lal~~l~~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiR 349 (993)
T PLN02414 270 TDLLALTMLKPPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIR 349 (993)
T ss_pred ECHHHhcCCCCHhhccCcEEEECCCccccCCCCCCCCeeEEEECHHHHhhCCCcccCcccCCCCCcccccccccccchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCCHHHHHHHH
Q 001531 413 RDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAA 492 (1058)
Q Consensus 413 RekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~~~~l~~~L 492 (1058)
||+|||||||+|++++.++++|+.+||++|+++++++++++++|++++|.+.| +++..+++|++|+|..+...++.++|
T Consensus 350 rEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G-~~~~~~~~f~~vt~~~~~~~~v~~~L 428 (993)
T PLN02414 350 RDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLG-FQVQSLPFFDTVKVKCSDADAIADAA 428 (993)
T ss_pred hcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcC-CccCCCCCcCeEEEecCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988 99887788999999886688899999
Q ss_pred HHcCceeeeccCCeEEEEeccCCCHHHHHHHHHHHhCCCCCCCCHHhhhhhhhccCCCCccCCCCCCCCCccCCCCCHHH
Q 001531 493 YKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHE 572 (1058)
Q Consensus 493 ~~~GI~~~~~~~~~lris~~~~~t~edid~ll~al~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~~~~p~~~~~~sE~e 572 (1058)
.++||+++....+.+|+|+||+||++|||+|+++|..........+.+...+...||+.++|++++|++|+|++++||+|
T Consensus 429 ~~~gI~l~~~~~~~lrvs~~e~~T~edId~L~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~l~~p~f~~~~se~~ 508 (993)
T PLN02414 429 AKVGINLRVVDANTVTVSFDETTTLEDVDKLFKVFAGGKPVPFTAESLAPEVDSSIPSSLARESPYLTHPIFNQYHSEHE 508 (993)
T ss_pred HHCCCeeEEecCCeEEEEeeccCCHHHHHHHHHHHcccccccchhhhhhhhhcccCchhhhccCccccCcccccccCHHH
Confidence 99999999877788999999999999999999999743110000111211112359999999999999999999999999
Q ss_pred HHHHHHHHhcCccCcCcccccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCCceee
Q 001531 573 LLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSL 652 (1058)
Q Consensus 573 ~~r~~~~l~~~~~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~~~~l 652 (1058)
|+||+++|++||++++++||||||||||+|+.+++.+++|++|...|||+|.++.||+++++.++++++++++|++.++|
T Consensus 509 ~~r~~~~l~~~~~~~~~~~~plgsctmk~n~~~~~~~~~~~~~~~~hp~~p~~~~~g~~~~~~~~r~~la~i~g~~~v~f 588 (993)
T PLN02414 509 LLRYLHRLQNKDLSLVHSMIPLGSCTMKLNATTEMMPVTWPEFANIHPFAPVDQAQGYQEMFEDLGDLLCEITGFDSFSL 588 (993)
T ss_pred HHHHHHHHhhcccccccCCccCcccccccCchhhhhhhcCcchhhcCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCCCCCHHHHHHHHHhcCCCeE
Q 001531 653 QPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLS 732 (1058)
Q Consensus 653 ~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~ta 732 (1058)
++++|+|||++++++++.|++.+|+.+|++||+|.++|++|++.+.+.|++++.||+|++|.+|+++|+++++++.++|+
T Consensus 589 ~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d~~G~vDle~L~~~i~~~~~~ta 668 (993)
T PLN02414 589 QPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVVVGTDAKGNINIEELRKAAEAHKDNLA 668 (993)
T ss_pred cCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhccCCCeE
Confidence 99999999999999999999888887889999999999999999999999999999999999999999999986656899
Q ss_pred EEEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEEeCCccccccCCCCCCCceeEEEEe
Q 001531 733 TLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVK 812 (1058)
Q Consensus 733 aV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~ 812 (1058)
+||+++||++|.++.||++|+++||++|++|+||++|+++++++..|+++|+|++++|.||||+.|||+||||+|+++++
T Consensus 669 ~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~ 748 (993)
T PLN02414 669 ALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVK 748 (993)
T ss_pred EEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEc
Confidence 99999999988887689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCe
Q 001531 813 KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPI 892 (1058)
Q Consensus 813 ~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v 892 (1058)
+++.+++||+.++.+....+|.....++.+..++||+++++.+||+||.+||.+|+++++++++.+|+|++++|++.+++
T Consensus 749 ~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~ 828 (993)
T PLN02414 749 KHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPV 828 (993)
T ss_pred hhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCc
Confidence 99999999998765432211111122334444688999999999999999999999999999999999999999998899
Q ss_pred eeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 893 LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 893 ~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
.|.+++++++|||+++++.+++.+|+++.+|+++|.++|||+++++||++++|||||||++|++|||+|+++|++|..|+
T Consensus 829 ~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e~ 908 (993)
T PLN02414 829 LFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEI 908 (993)
T ss_pred cccCCCCCeeeeEEEeccccccccCCCHHHHHHHHHHcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHH
Confidence 88877778999999999877666678899999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCcccccCCCCCCccCCCCCCCCCccccccccCCcccCCccccCCcccccccCCCccccccCchhhhHHH
Q 001531 973 AQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLPAAQVAEE 1052 (1058)
Q Consensus 973 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1058)
++|++|+||++||+|||||||+.+|++++|+||||||+||||++|++++||||||+||||+||||||+|+|||+-+-+++
T Consensus 909 ~~~~~g~~~~~~~~l~~ap~~~~~~~~~~w~~~y~r~~a~~p~~~~~~~k~~~~v~r~d~~~gd~~l~c~c~~~~~~~~~ 988 (993)
T PLN02414 909 ADIENGKADRENNVLKGAPHPPSLLMADKWDKPYSREYAAFPAPWVRASKFWPTTGRVDNVYGDRNLVCTLPSAAEEEEA 988 (993)
T ss_pred HHHhcCCCCCCCchhhcCCCChHHhhcCCCCCCcChhhccCCCcccccCccCCCccccccccccccccccCCCccchHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998876655
Q ss_pred HHH
Q 001531 1053 QAA 1055 (1058)
Q Consensus 1053 ~~~ 1055 (1058)
.++
T Consensus 989 ~~~ 991 (993)
T PLN02414 989 AAA 991 (993)
T ss_pred Hhh
Confidence 443
No 5
>PRK05367 glycine dehydrogenase; Provisional
Probab=100.00 E-value=3.6e-199 Score=1841.86 Aligned_cols=943 Identities=62% Similarity=1.049 Sum_probs=884.2
Q ss_pred CCCccccccCCCCCHHHHHHHHHHhCCCCHHHhhhccCCCcc-ccCCCCCCCCCCCCCHHHHHHHHHHHhcCCccccccc
Q 001531 93 KPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFI 171 (1058)
Q Consensus 93 ~~~~~f~~~~i~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~sE~e~~~~~~~la~~n~~~~~~l 171 (1058)
.+.|+|+.||||||++|+++||++||++|+||||+++||++| ++++++|| +++||.|+++||++|++||+.+++|+
T Consensus 5 ~~~~~~~~~~i~~~~~~~~~ml~~~g~~s~~~l~~~~iP~~i~~~~~l~lp---~~~sE~e~~~~~~~la~~N~~~~~~i 81 (954)
T PRK05367 5 ENSDAFARRHIGPSAADQQAMLAALGADSLDALIDQAVPASIRLAEPLDLP---AALSEAEALAELRAIASKNKVFRSYI 81 (954)
T ss_pred cccccccccCCCcCHHHHHHHHHhcCCCCHHHHhhhhCCHHHhcCCCCCCC---CCCCHHHHHHHHHHHHhcCCCCCccc
Confidence 456789999999999999999999999999999999999999 88889998 79999999999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccc
Q 001531 172 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ 251 (1058)
Q Consensus 172 G~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~ 251 (1058)
|+|||+|++|++|+|+|++||+|||+|||||||+|||+||+++|||+|+|+|+||+++|+||+|++|+++|+++|++++.
T Consensus 82 g~G~y~~~~P~vi~~~i~~~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~ 161 (954)
T PRK05367 82 GQGYYGTHTPPVILRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVS 161 (954)
T ss_pred CCCCCCCcCcHHHHHHHHhCcchhhccCCCChHHHHHHHHHHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998875
Q ss_pred cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchh-hhccCCCEeEEEEEcCCCceeeccHHHHHHHHHhcCcEEE
Q 001531 252 KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD-IDYKSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVV 330 (1058)
Q Consensus 252 ~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~~-l~~l~~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galli 330 (1058)
++++++|||++.+||+++.+|+++++..|+++++++.++ ++ ++++.+|++|+||++|.+.|+++|+++||++|++++
T Consensus 162 ~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d~~--~~~~~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~ 239 (954)
T PRK05367 162 KSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKALD--HDDVFGVLLQYPGTSGEVRDYTALIAAAHARGALVA 239 (954)
T ss_pred cCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccCCC--cccEEEEEEecCCCCeeeccHHHHHHHHHHcCCEEE
Confidence 323589999999999999999999999999999998753 32 357889999999999999999999999999999999
Q ss_pred EEeccccccCCCCCCcccceEEEecCcccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeeccccccc
Q 001531 331 MATDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQH 410 (1058)
Q Consensus 331 V~a~~~slg~l~~p~~~GaDivvgs~k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~ 410 (1058)
|++++++++++++|+++||||+++++|+||+||||||||+|||+++++++|+||||++|+++|.+|+++|+|++||||||
T Consensus 240 vda~~~Al~~l~~pge~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqh 319 (954)
T PRK05367 240 VAADLLALTLLTPPGEMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQH 319 (954)
T ss_pred EEehhhhccCCCChhhcCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC-HHHHH
Q 001531 411 IRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIA 489 (1058)
Q Consensus 411 irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~-~~~l~ 489 (1058)
||||||||||||+|+++++++++|+.|||++|+++|+++++.+++||+++|++.| +++..+.+|++++++.+. +.++.
T Consensus 320 iRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G-~~~~~~~~f~~~~~~~~~~~~~i~ 398 (954)
T PRK05367 320 IRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALG-LEVVHDSFFDTLTVEVGGDAAAVL 398 (954)
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcC-cccCCCCCCCeEEEeCCCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999998877 998877889999998864 89999
Q ss_pred HHHHHcCceeeeccCCeEEEEeccCCCHHHHHHHHHHHhCCCCCCCCHHhhhhhh----hccCCCCccCCCCCCCCCccC
Q 001531 490 SAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEV----ETAIPSGLTRESPYLTHPVFN 565 (1058)
Q Consensus 490 ~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~al~~~~~~~~~~~~l~~~~----~~~ip~~~~~~~~~~~~p~~~ 565 (1058)
++|.++||+++...++.+|+|+||++|++||++|+++|+.... ..+.+.... ...||+.++|+++++++|+|+
T Consensus 399 ~~l~~~gi~~~~~~~~~l~is~~e~~t~~did~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~f~ 475 (954)
T PRK05367 399 ARALAAGINLRRVDDDHVGISLDETTTREDLAALLAVFGGAAL---DVDALDADVADASASALPAALLRTSAYLTHPVFN 475 (954)
T ss_pred HHHHHCCceeccccCCEEEEEecccCCHHHHHHHHHHHccccc---chhhhhhhhcccccccCCHHHhcCCcccCCcccC
Confidence 9999999999877678999999999999999999999974310 112111101 125999999999999999999
Q ss_pred CCCCHHHHHHHHHHHhcCccCcCcccccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHh
Q 001531 566 KYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTIT 645 (1058)
Q Consensus 566 ~~~sE~e~~r~~~~l~~~~~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~ 645 (1058)
+++||.|++|||++|++||++++++||+|||||||+|+.+++.+++|++|.+||||||.|++||++++++|+++|++++|
T Consensus 476 ~~~sE~e~~r~~~~l~~kn~~~~~~~i~lGsct~~~~p~~~~~~~~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~elt 555 (954)
T PRK05367 476 RYHSETEMMRYLRRLEDKDLALDRSMIPLGSCTMKLNAAAEMIPITWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEIT 555 (954)
T ss_pred CCCCHHHHHHHHHHHHhcCcCcccceeeCCcCCCcCCHHHHHHHHhCccccccCCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCCCCCHHHHHHHHH
Q 001531 646 GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAE 725 (1058)
Q Consensus 646 G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g~iD~e~L~~~i~ 725 (1058)
|++.+++++++|++||+++++++|.|+.++|+.+|++|++|+++|++||+++.+.|++++.+++|++|.+|+++|+++++
T Consensus 556 G~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~G~iD~~~L~~~i~ 635 (954)
T PRK05367 556 GYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDENGNIDLDDLRAKAE 635 (954)
T ss_pred CCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCCCCcCHHHHHHHHh
Confidence 99999999999999999999999999988887778899999999999999999999999999999899999999999998
Q ss_pred hcCCCeEEEEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEEeCCccccccCCCCCCCc
Q 001531 726 ANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPG 805 (1058)
Q Consensus 726 ~~~~~taaV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~~s~hKtf~~P~g~GGPg 805 (1058)
++++++++||+++|+++|+++.||++|+++||++|+++||||||++++.++.+|+++|+|++++|+||||++|||+||||
T Consensus 636 ~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi~~~s~HK~f~~P~G~GGPg 715 (954)
T PRK05367 636 EHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGADVSHLNLHKTFCIPHGGGGPG 715 (954)
T ss_pred ccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCCCEEEecCcccCCCCcCCCCCc
Confidence 65568999999999999998658999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHH
Q 001531 806 MGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKR 885 (1058)
Q Consensus 806 ~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~ 885 (1058)
+|++++++++.+++||+.++.+. ...+.+.++++++|+++++.++|+|+.++|.+|+++++++++.+|+|++++
T Consensus 716 ~G~l~vr~~l~p~lpg~~v~~~~------~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~ 789 (954)
T PRK05367 716 VGPIGVKAHLAPFLPGHPVQIAG------GETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKR 789 (954)
T ss_pred eEEEeecccccccCCCCccCcCC------CCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998765432 122346777778899999999999999999999999999999999999999
Q ss_pred HhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHH
Q 001531 886 LEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDAL 965 (1058)
Q Consensus 886 L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL 965 (1058)
|++.+++.|.+++++++|||+++++++++..|+++.+|+++|.++||++++++||+++++||+|||++|++|||+|+++|
T Consensus 790 L~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t~~~pv~~~l~i~ptE~~s~~elDr~~~al 869 (954)
T PRK05367 790 LKDHYPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLIDYGFHAPTMSFPVAGTLMVEPTESESKAELDRFCDAM 869 (954)
T ss_pred HHhhcCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHHHCCCeEeecCCccCCEEEEEeeecCCHHHHHHHHHHH
Confidence 99989998988777899999999977765567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCCcccccCCCCCCccCCCCCCCCCccccccccCCcccCCccccCCcccccccCCCccccccCc
Q 001531 966 ISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 1045 (1058)
Q Consensus 966 ~~i~~e~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1058)
++|..|+++|++|+||++||+|||||||..+|++++|+||||||+|+||++|++++||||||+||||+||||||+|+|||
T Consensus 870 ~~i~~e~~~~~~~~~~~~~~~~~~ap~~~~~~~~~~w~~~y~r~~~~~p~~~~~~~k~~~~~~r~~~~~gd~~~~c~~~~ 949 (954)
T PRK05367 870 IAIRAEIDEVEAGEWPAEDNPLKNAPHTAADLVADEWDHPYSREQAAFPLPSLRANKYWPPVGRIDNVYGDRNLVCSCPP 949 (954)
T ss_pred HHHHHHHHHhhcCCCCCCcchhhhCCCCHHHhccCCCCCCCCHHHhcCCCcccccCCcCCCcCcccccccceeeecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhH
Q 001531 1046 AAQVA 1050 (1058)
Q Consensus 1046 ~~~~~ 1050 (1058)
+|+|+
T Consensus 950 ~~~~~ 954 (954)
T PRK05367 950 IEAYA 954 (954)
T ss_pred hhhcC
Confidence 99884
No 6
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-113 Score=941.27 Aligned_cols=435 Identities=55% Similarity=0.885 Sum_probs=410.3
Q ss_pred CCCccccccCCCCCHHHHHHHHHHhCCCCHHHhhhccCCCcc-cc--CCCCCCCCCCCCCHHHHHHHHHHHhcCCccccc
Q 001531 93 KPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RI--DSMKFSKFDEGLTESQMIEHMQKLASMNKVYKS 169 (1058)
Q Consensus 93 ~~~~~f~~~~i~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~--~~~~lp~~~~~~sE~e~~~~~~~la~~n~~~~~ 169 (1058)
.+.+.|+.|||+|+++|+++||++||++|+||||+++||++| .+ ..+.+ ++++||.|+++++++++++|+.+.+
T Consensus 2 ~~~~~f~~rh~~P~~~d~~~ML~~iG~~Sld~L~~~~IP~~Ir~~~~~~~~~---~~~~sE~e~l~~l~~ia~kN~~~~s 78 (450)
T COG0403 2 EPLDAFMARHIGPSSADQQEMLAAIGVSSLDELFSQDIPPSIRKKLDTLLPL---PKPLSEYEALAELKEIASKNKVFTS 78 (450)
T ss_pred CccchhhhcCCCCChHHHHHHHHHcCCCCHHHHhhccCCHHHHhcccccCCC---CCCCCHHHHHHHHHHHHhcCchhhh
Confidence 356789999999999999999999999999999998899999 44 22334 4899999999999999999999999
Q ss_pred ccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhc
Q 001531 170 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN 249 (1058)
Q Consensus 170 ~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~ 249 (1058)
|+|+|||+|++|++|+|+|++||+|||+|||||||||||+||+|||||+++|||||||++|+||||++||++|||+||.|
T Consensus 79 fiG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r 158 (450)
T COG0403 79 FIGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKR 158 (450)
T ss_pred hccCcccCCcCcHHHHHHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhhc----cCCCEeEEEEEcCCCce-eeccHHHHHHHHHh
Q 001531 250 IQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY----KSGDVCGVLVQYPGTEG-EVLDYGDFIKNAHA 324 (1058)
Q Consensus 250 ~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~~l~~----l~~~t~~V~v~~pn~~G-~i~dl~~I~~~a~~ 324 (1058)
.+|+++++|+|+..+||+++++++||++++|++++.++.++++. .+.++++|+||+||++| .+.|+++|.+.+|+
T Consensus 159 ~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~d~~~l~~~~~~~~~gv~vQyP~~~G~~~~d~~~l~~~~h~ 238 (450)
T COG0403 159 VTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDADDLDDLESADDGDVFGVLVQYPNTFGIVEEDLRALIEAAHS 238 (450)
T ss_pred hhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccchhhhhhhccccCeEEEEEecCCCCCccchhHHHHHHHHhh
Confidence 87556899999999999999999999999999999998876543 24589999999999999 66789999999999
Q ss_pred cCcEEEEEeccccccCCCCCCcccceEEEecCcccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeec
Q 001531 325 NGVKVVMATDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAM 404 (1058)
Q Consensus 325 ~galliV~a~~~slg~l~~p~~~GaDivvgs~k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~l 404 (1058)
+|++++|++|+++|+++++||+|||||+||++|+||+||+|||||+|||+|+++++|+|||||||+|+|.+|+++|+|+|
T Consensus 239 ~~al~~v~aDplaL~LL~pPGe~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaL 318 (450)
T COG0403 239 AGALVIVAADPLALGLLKPPGEFGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLAL 318 (450)
T ss_pred cCCEEEEEechhHhhccCCccccCCceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCC-CeEEcCCCCccEEEEecC
Q 001531 405 QTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG-TVEVQGLPFFDTVKVKCA 483 (1058)
Q Consensus 405 qtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G-~~~l~~~~~~~~v~i~~~ 483 (1058)
||||||||||||||||||||+|+|++|++|++|||++||++|++|+++++++|+++|++++ |+++..+.+|++|+++++
T Consensus 319 QTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~~fFdt~~v~~~ 398 (450)
T COG0403 319 QTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFDHFFDTFTVRVP 398 (450)
T ss_pred HHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccccceeeEEEecc
Confidence 9999999999999999999999999999999999999999999999999999999999652 499987799999999998
Q ss_pred -C-HHHHHHHHHHcCceeeeccCCeEEEEeccCCCHHHHHHHHHHHhCC
Q 001531 484 -D-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGG 530 (1058)
Q Consensus 484 -~-~~~l~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~al~~~ 530 (1058)
+ ...+.++....||+++.++++++.+|++|++|++||+.|+++|+..
T Consensus 399 ~~~~~~l~~~~~~~G~~L~~~~~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 399 EEVAEALLAAAIAGGINLRRVDADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred hhHHHHHHHHHHhcCCceeeecCCceEEEeecccCHHHHHHHHHHHhhh
Confidence 4 7778888888999999998899999999999999999999999753
No 7
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-111 Score=922.64 Aligned_cols=459 Identities=60% Similarity=1.033 Sum_probs=428.6
Q ss_pred CCCCCCccCCC-----CCHHHHHHHHHHHhcCccCcCcccccccccccCCcccccccccccccccccCCCCchhhhhcHH
Q 001531 557 PYLTHPVFNKY-----HTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQ 631 (1058)
Q Consensus 557 ~~~~~p~~~~~-----~sE~e~~r~~~~l~~~~~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~ 631 (1058)
.+|++|+|++. +||.||+||+++|++||+.++.+||||||||||+|+.+++.++.|++|.++|||||.++.||++
T Consensus 29 ~~L~~~~~r~~~~~Pe~SE~e~~Rh~~rLs~kn~avd~~m~PLGSCTMK~Np~~e~~~~~~p~f~~iHP~~pe~~vqG~l 108 (496)
T COG1003 29 EYLPHPVFRRYPPLPEHSETEMVRHYTRLSQKDLAVDRGMIPLGSCTMKLNPKAEMKPATWPEFANIHPFQPEEQVQGYL 108 (496)
T ss_pred hhcCcHHhhcCCCCccccHHHHHHHHHHHHhcccccccCccCCcccccccCchhhcccccccchhhcCCCCChHHHHHHH
Confidence 44555555555 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCC
Q 001531 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA 711 (1058)
Q Consensus 632 ~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~ 711 (1058)
+++.+||+||+++||||.+++||++|||||+++|++||+||+++|+++|++||||+|||||||++|.|.|++||.|++++
T Consensus 109 ~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~~ 188 (496)
T COG1003 109 ELIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVKCDE 188 (496)
T ss_pred HHHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEEeCC
Q 001531 712 KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNL 791 (1058)
Q Consensus 712 ~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~~s~ 791 (1058)
+|.+|+++|+++++ ++|+++|+|||||+|+||++|.+||+++|++|++||+||||+|++.|+.+||++|+||+|+|+
T Consensus 189 ~G~VDlddLk~k~~---~~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~G~DV~HlNL 265 (496)
T COG1003 189 NGNVDLDDLRAKAE---DNLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDMGFDVVHLNL 265 (496)
T ss_pred CCCccHHHHHHHhc---cceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhhhccccccccccceEEeec
Confidence 99999999999998 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccC-CCC-CCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHH
Q 001531 792 HKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVST-GGI-PAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1058)
Q Consensus 792 hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~-~d~-g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1058)
|||||+||||||||+|+|+|+++|.+|||+...... ..+ ......++.+.++ ++||+++++.++|+||.+||.+|++
T Consensus 266 HKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~-a~~Gs~~il~~a~~YI~~mG~~GL~ 344 (496)
T COG1003 266 HKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSA-APYGSASILPIAWAYIRMMGADGLK 344 (496)
T ss_pred ccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeec-cccCcchHHHHHHHHHHHHhHHHHH
Confidence 999999999999999999999999999998541101 111 1111223444444 5999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCC--CCCEEEE
Q 001531 870 EASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP--VPGTLMI 947 (1058)
Q Consensus 870 ~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p--~~~~Lri 947 (1058)
+.++.+++|||||+++|++.|+++|.+.+ ++.||||+|.+++++++|+++.||+|||+|+|||+||++|| |+++|||
T Consensus 345 ~ase~AvLNANYia~rL~~~y~~~y~~~~-~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfHaPT~~FPliV~~tLMI 423 (496)
T COG1003 345 QASEVAVLNANYIARRLKGYYPVPYTGEN-RVAHECILDARPLKKETGVRALDVAKRLLDYGFHAPTMYFPLIVAGTLMI 423 (496)
T ss_pred HHHHHHHHhHHHHHHHhhhcCccccCCCC-cceeEEEeechHhHhhcCCcHHHHHHHHHhcCCCCCcccCccccccceee
Confidence 99999999999999999999999997754 79999999999898889999999999999999999999999 8999999
Q ss_pred EcCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCCccCCCCCCCCCccccccccCCcccCCc
Q 001531 948 EPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAK 1022 (1058)
Q Consensus 948 s~te~~t~eeid~fi~aL~~i~~e~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1022 (1058)
+|||+++|+|+|+|+++|++|.+|++++.+| +..+++++++||+.+++.+.+|+|||+|++++||+++++.+|
T Consensus 424 EPTEsEsk~eLDrf~dami~I~~Ea~~~~~~--~~~~~P~~~a~~r~~e~~a~~~~~p~~R~~~~~p~~~~~~~k 496 (496)
T COG1003 424 EPTESESKEELDRFIDAMIAIREEADAVPAG--PLKDNPLNTAPHRLDELLAARWDHPYSREEAAYPLGKLRADK 496 (496)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHhccCC--ccccCcccCCcchHHHHhhccCCCCeeeehccccccccccCC
Confidence 9999999999999999999999999999878 678999999999999999999999999999999999998665
No 8
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=100.00 E-value=8.1e-101 Score=873.17 Aligned_cols=425 Identities=44% Similarity=0.665 Sum_probs=330.5
Q ss_pred ccCCCCCHHHHHHHHHHhCCCCHHHhhhccCCCcc-ccCCCCCCCCCCCCCHHHHHHHHHHHhcCCcccccccCCCCCCC
Q 001531 100 RRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNT 178 (1058)
Q Consensus 100 ~~~i~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~sE~e~~~~~~~la~~n~~~~~~lG~g~~~~ 178 (1058)
+||||||++|+++||++||++|+||||+++||+++ ++++++|| +++||.|+++|+++|+++|..+.+|+|+|+|+|
T Consensus 1 ~ryi~~t~~~~~~ML~~iG~~sieeL~~~~IP~~i~~~~~~~lp---~~~sE~e~~r~~~~la~kN~~~~~fiG~G~y~~ 77 (429)
T PF02347_consen 1 MRYIPPTDEDIQEMLDAIGVKSIEELFDSDIPEEIRLKKPLNLP---EPLSEYELLRHLERLASKNKSYTSFIGAGSYTH 77 (429)
T ss_dssp -------HHHHHHHHHHCT-SSTGGGG-TTS-GGG-SS-------------HHHHHHHHHHHHTTS--TTS---CTTT--
T ss_pred CCCCCcCHHHHHHHHHhcCCCCHHHHhhhhCCHhhcCCCCCCCC---CCCCHHHHHHHHHHHHhcCCCCCccccccccCc
Confidence 59999999999999999999999999966799999 88889998 789999999999999999999999999999999
Q ss_pred CChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEE
Q 001531 179 HVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTF 258 (1058)
Q Consensus 179 ~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~V 258 (1058)
++|++|.+++++||+|||+|||||||+|||+||+|||||+|||+|||||.+|+|+||++||++||++|+.|..++++++|
T Consensus 78 ~~P~~i~~~i~~~~ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~v 157 (429)
T PF02347_consen 78 YVPAVIDRNILSRPEFYTAYTPYQPEISQGRLQALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKV 157 (429)
T ss_dssp ---HHHHH-HHCCHHCCCS-STTSGGGBHHHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EE
T ss_pred eeChhhcCccccChhhhccCCCCCcHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEE
Confidence 99999998899999999999999999999999999999999999999999999999999999999999988764456799
Q ss_pred EEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhhcc-CCCEeEEEEEcCCCceeeccHHHHHHHHHhcCcEEEEEecccc
Q 001531 259 IIASNCHPQTIDICITRADGFDIKVVVSDLKDIDYK-SGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLA 337 (1058)
Q Consensus 259 lv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~~l~~l-~~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~s 337 (1058)
+|++..||+++.+++++++..|++++.++.++-... ++++++|+||+||++|.++|+++|++++|++|+++++++|+++
T Consensus 158 lv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d~~~~a~v~vq~Pn~~G~~ed~~~i~~~~h~~gal~~~~ad~~a 237 (429)
T PF02347_consen 158 LVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTDDDDTAAVMVQNPNTFGVFEDIKEIADIAHAAGALVIVGADPNA 237 (429)
T ss_dssp EEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB-STTEEEEEEESS-TTSB--THHHHHHHHHHTT-EEEECGGCCG
T ss_pred EEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCccccCeEEEEeecCCCCceEeeHHHHHHHHHHcCCEEEEecCHHH
Confidence 999999999999999999999999999987643222 4789999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcccceEEEecCcccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccC
Q 001531 338 LTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKAT 417 (1058)
Q Consensus 338 lg~l~~p~~~GaDivvgs~k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaT 417 (1058)
++++++||+|||||+||++|+||+||+|||||+|||+|+++++|+||||+||+|+|.+|+++|+|+||||||||||||||
T Consensus 238 L~~l~~Pge~GADI~vg~~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAt 317 (429)
T PF02347_consen 238 LGGLKSPGEYGADIVVGEHQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKAT 317 (429)
T ss_dssp CCTC--GGGGT-SEEEECCTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCST
T ss_pred HhCcCChhhcCccEEeeCCCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC--HHHHHHHHHHc
Q 001531 418 SNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKI 495 (1058)
Q Consensus 418 sni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~--~~~l~~~L~~~ 495 (1058)
|||||+|+|+|++|++|+.++|++||++++++++.+|+||+++|+++.++.+.+..+|++|.+..+. ..++.+++...
T Consensus 318 SNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~~~f~e~v~~~~~~~~~~~l~~~~~~~ 397 (429)
T PF02347_consen 318 SNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPFDNPFFFEFVVVFSKDKEVEELLKRGIEG 397 (429)
T ss_dssp T---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSSSSSBSSEEEEESS-HHHHHHHHTT---
T ss_pred hhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCceeeeeecCCcHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999742444455677777776664 44466666666
Q ss_pred CceeeeccCCeEEEEeccCCCHHHHHHHHHHH
Q 001531 496 EMNLRVVDSNTVTASFDETTTLEDVDKLFIVF 527 (1058)
Q Consensus 496 GI~~~~~~~~~lris~~~~~t~edid~ll~al 527 (1058)
|++++....+++++|+||.+|++|||+|+++|
T Consensus 398 gl~~~~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 398 GLNLRYPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp -EEEGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred CCCccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 77776666679999999999999999999876
No 9
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=100.00 E-value=2.5e-68 Score=607.08 Aligned_cols=403 Identities=34% Similarity=0.526 Sum_probs=295.8
Q ss_pred CCCHHHHHHHHHHHhCCCCCCCCHHhhhhhhhccCCCCccCCCCCCCCCccCCCCCHHHHHHHHHHHhcCccCcCccccc
Q 001531 514 TTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIP 593 (1058)
Q Consensus 514 ~~t~edid~ll~al~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~~~~p~~~~~~sE~e~~r~~~~l~~~~~~~~~~~i~ 593 (1058)
-+|++|++.+++.++.+ |+|||+. ++||+++++++++ .+| .++||.|++||+++|++||.. ..++++
T Consensus 5 ~~t~~~~~~ML~~iG~~-----sieeL~~---~~IP~~i~~~~~~-~lp---~~~sE~e~~r~~~~la~kN~~-~~~fiG 71 (429)
T PF02347_consen 5 PPTDEDIQEMLDAIGVK-----SIEELFD---SDIPEEIRLKKPL-NLP---EPLSEYELLRHLERLASKNKS-YTSFIG 71 (429)
T ss_dssp ---HHHHHHHHHHCT-S-----STGGGG----TTS-GGG-SS--------------HHHHHHHHHHHHTTS---TTS---
T ss_pred CcCHHHHHHHHHhcCCC-----CHHHHhh---hhCCHhhcCCCCC-CCC---CCCCHHHHHHHHHHHHhcCCC-CCcccc
Confidence 36899999999999988 8999983 5899999998875 665 569999999999999999998 788999
Q ss_pred ccccccCCcccccccccccccccc-cCCCCchhhhhcHHHHHHHHHHHHHHHhCCCce--eeecCchHHHHHHHHHHHHH
Q 001531 594 LGSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRA 670 (1058)
Q Consensus 594 lGs~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~qG~~~~~~el~~~lael~G~~~~--~l~~~sGa~ge~a~llair~ 670 (1058)
+|+|+|++|+.+.+..++|++|++ |||||| |++||++|+++|+|+++|+|||||.+ ++++.+||+|| +++|++|.
T Consensus 72 ~G~y~~~~P~~i~~~i~~~~ef~TaYtPYQp-EisQG~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aE-a~~ma~r~ 149 (429)
T PF02347_consen 72 AGSYTHYVPAVIDRNILSRPEFYTAYTPYQP-EISQGRLQALFEYQSMICELTGMDVANASLYDGATAAAE-AMLMAVRA 149 (429)
T ss_dssp CTTT-----HHHHH-HHCCHHCCCS-STTSG-GGBHHHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHH-HHHHHHHH
T ss_pred ccccCceeChhhcCccccChhhhccCCCCCc-HHHHHHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHH-HHHHHHHh
Confidence 999999999999996699999987 999999 99999999999999999999999974 78999999998 88888876
Q ss_pred HHHHcCCCCCCEEEEcCCCCCccHH----HHHhCCcEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCCccccc
Q 001531 671 YHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYE 746 (1058)
Q Consensus 671 y~~~~G~~~r~~Vlip~saHg~~pa----~a~~~G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~G~i~ 746 (1058)
.+ +++++|++|.+.|+.+.+ ++...|++++.++++++|..| + +++++||+++||++|+|+
T Consensus 150 ~~-----~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d--------~---~~~a~v~vq~Pn~~G~~e 213 (429)
T PF02347_consen 150 TK-----RKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTD--------D---DDTAAVMVQNPNTFGVFE 213 (429)
T ss_dssp HT-----T---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB---------S---TTEEEEEEESS-TTSB--
T ss_pred cc-----cCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCcc--------c---cCeEEEEeecCCCCceEe
Confidence 42 235799999999998887 466799999999998888877 3 899999999999999999
Q ss_pred ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCccc
Q 001531 747 EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVS 826 (1058)
Q Consensus 747 ~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~ 826 (1058)
|+++|++++|++|+++++ ++|+++++++.+||++|+||++++ ||+|++||+||||+.|++++++++++++||+++|.
T Consensus 214 -d~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pge~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~ 290 (429)
T PF02347_consen 214 -DIKEIADIAHAAGALVIV-GADPNALGGLKSPGEYGADIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQ 290 (429)
T ss_dssp -THHHHHHHHHHTT-EEEE-CGGCCGCCTC--GGGGT-SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEE
T ss_pred -eHHHHHHHHHHcCCEEEE-ecCHHHHhCcCChhhcCccEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecc
Confidence 699999999999999999 999999999999999999999765 89999999999999999999999999999999998
Q ss_pred CCCC-CCC-------------CCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCe
Q 001531 827 TGGI-PAP-------------EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPI 892 (1058)
Q Consensus 827 ~~d~-g~~-------------~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v 892 (1058)
+.|. |++ +|+|+|+|||++ +++++.+|++|+.++|++|+++++++++++|+|++++|++.+.+
T Consensus 291 t~D~~G~~~~~ltLqtREQHIrReKAtSNIctn---qaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~ 367 (429)
T PF02347_consen 291 TKDADGKRAFVLTLQTREQHIRREKATSNICTN---QALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGL 367 (429)
T ss_dssp EEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBE
T ss_pred cccccccceeeeccccccccccccchhhhhhhh---HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 7664 433 278999999984 88888999999999999999999999999999999999987666
Q ss_pred eeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccC-CCCCCCCEEEEEcCCCCCHHHHHHHHHHH
Q 001531 893 LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWPVPGTLMIEPTESESKEELDRYCDAL 965 (1058)
Q Consensus 893 ~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~-~~~p~~~~Lris~te~~t~eeid~fi~aL 965 (1058)
.+. +++++++++...+ + ..+. +|.++++..+. ..++..++++||+||.+|++|||+|+++|
T Consensus 368 ~~~---~~~f~e~v~~~~~-------~-~~~~-~l~~~~~~~gl~~~~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 368 PFD---NPFFFEFVVVFSK-------D-KEVE-ELLKRGIEGGLNLRYPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp CSS---SSSBSSEEEEESS---------HHHH-HHHHTT----EEEGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred ccC---CCCceeeeeecCC-------c-HHHH-HHHHHHHhcCCCccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 554 3567788776541 1 2222 25555555441 12344679999999999999999999875
No 10
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=100.00 E-value=1.7e-60 Score=567.60 Aligned_cols=446 Identities=45% Similarity=0.778 Sum_probs=383.3
Q ss_pred ccCCCCccCCCCCCCCCccCCCCCHHHHHHHHHHHhcCccCcCcccccccccccCCcccccccccccccccccCCCCchh
Q 001531 546 TAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPAD 625 (1058)
Q Consensus 546 ~~ip~~~~~~~~~~~~p~~~~~~sE~e~~r~~~~l~~~~~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e 625 (1058)
.+||+++++++++ .+| + +||.|++||+++|+++|...+++++++|+|++++++.+....+++++|.+||||||..
T Consensus 32 ~~ip~~~~~~~~~-~~~---~-~se~~~~~~~~~l~~~n~~~~~~~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~ 106 (481)
T PRK04366 32 SLLPEELLRKEPP-ELP---E-VSELEVVRHYTRLSQKNYGVDTGFYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEE 106 (481)
T ss_pred ccCCHHHhcCCCC-CCC---C-CCHHHHHHHHHHHHhcCCCCCcceecCcccCCCCCHHHHHHHHhCcchhcCCCCCChh
Confidence 5799999998876 666 3 9999999999999999998778999999999999999998888888998999999944
Q ss_pred hhhcHHHHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEE
Q 001531 626 QAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1058)
Q Consensus 626 ~~qG~~~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv 705 (1058)
.+||.++++.++++++++++|++.+++.+++|+.+++.++++++.+...+|++++++||++...|+.+...+.+.|++++
T Consensus 107 ~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv 186 (481)
T PRK04366 107 TVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVV 186 (481)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEE
Confidence 99999999999999999999999888999999988865555566665556644667999999999999988999999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCc
Q 001531 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 785 (1058)
Q Consensus 706 ~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaD 785 (1058)
.++++++|.+|+++|+++++ ++|++|++++||++|+++.|+++|+++||++|++++||+||++++.+...|+++|+|
T Consensus 187 ~v~~~~~~~~D~e~L~~~i~---~~t~~V~v~~Pn~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~GaD 263 (481)
T PRK04366 187 EIPSNEDGLVDLEALKAAVG---EDTAALMLTNPNTLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKARPGDMGFD 263 (481)
T ss_pred EeecCCCCCcCHHHHHhhcc---cCCeEEEEeCCCCccccchHHHHHHHHHHHcCCEEEEEecChhhhcccCCccccCCC
Confidence 99998889999999999996 789999999999999884379999999999999999999998776666689999999
Q ss_pred EEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCC-C-CCCCCCCCCCCCCccchhhHHHHHHHHHHHHHH
Q 001531 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGG-I-PAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 863 (1058)
Q Consensus 786 i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d-~-g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~l 863 (1058)
++++++||+|+.|+|+||||+|++++++++.+++|+++++..+. + ....++....... +..++++.+.++|+|+..+
T Consensus 264 ~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~-a~t~~~l~~~~a~~~l~~~ 342 (481)
T PRK04366 264 VVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVR-AFYGNFGVLVRAYAYIRSL 342 (481)
T ss_pred EEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCCceeecccccccCCCcc-cccCchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987764221 1 0000111111111 1124667888999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCC--C
Q 001531 864 GSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP--V 941 (1058)
Q Consensus 864 G~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p--~ 941 (1058)
|++|+++++++++.+++||+++|++++++.+. ++++|+++|++..|. ..|++..+++++|.++||+++...+| .
T Consensus 343 G~~Gl~~~a~~~~~~a~~l~~~L~~~~~~~~~---~~~~~~~~~~~~~~~-~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~ 418 (481)
T PRK04366 343 GAEGLREVSEDAVLNANYLKARLKDIYDLPYD---RPCMHEFVLSGKKLK-ETGVRTLDIAKRLLDYGFHPPTIYFPLIV 418 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhCcccCC---CCeeEEEEEECcccc-ccCCCHHHHHHHHHHCCccCCcccccccc
Confidence 99999999999999999999999987676653 367899999875442 23568899999999999998877776 3
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCCccCCCCCCCCCccccccccCCcccCC
Q 001531 942 PGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFA 1021 (1058)
Q Consensus 942 ~~~Lris~te~~t~eeid~fi~aL~~i~~e~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1021 (1058)
.+++|+++|+++|++|||+|+++|+++.+++.+ +|+.+|+|||++
T Consensus 419 ~~~l~is~~e~~t~edid~l~~~l~~i~~~~~~--------~~~~~~~~p~~~--------------------------- 463 (481)
T PRK04366 419 PEALMIEPTETESKETLDAFIAAMKQIAEEAKE--------NPELVKEAPHNT--------------------------- 463 (481)
T ss_pred CCeEEEcccCCCCHHHHHHHHHHHHHHHHHHHh--------CcHhHhhCCCCC---------------------------
Confidence 679999999999999999999999999999888 899999999999
Q ss_pred ccccCCcccccccCCCcccccc
Q 001531 1022 KFWPATGRVDNVYGDRNLICTL 1043 (1058)
Q Consensus 1022 ~~~~~~~~~~~~~~~~~~~~~~ 1043 (1058)
||+|+|++.+.|.+..||
T Consensus 464 ----~~~~~~~~~~~~~~~~~~ 481 (481)
T PRK04366 464 ----PVRRLDEVKAARKPVLRW 481 (481)
T ss_pred ----CCCCcccccccccCcCCC
Confidence 999999999999998876
No 11
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-58 Score=508.40 Aligned_cols=408 Identities=24% Similarity=0.332 Sum_probs=349.4
Q ss_pred HHHHHHHHHHHhCCCCCCCCHHhhhhhhhccCCCCccCCCCCCCCCccCCCCCHHHHHHHHHHHhcCccCcCcccccccc
Q 001531 517 LEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGS 596 (1058)
Q Consensus 517 ~edid~ll~al~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~~~~p~~~~~~sE~e~~r~~~~l~~~~~~~~~~~i~lGs 596 (1058)
.+|.+.++++++.+ |+|+||. ++||++++.+ ...++..++++||.|+++++++++++|.. ..++|+.|+
T Consensus 16 ~~d~~~ML~~iG~~-----Sld~L~~---~~IP~~Ir~~--~~~~~~~~~~~sE~e~l~~l~~ia~kN~~-~~sfiG~Gy 84 (450)
T COG0403 16 SADQQEMLAAIGVS-----SLDELFS---QDIPPSIRKK--LDTLLPLPKPLSEYEALAELKEIASKNKV-FTSFIGAGY 84 (450)
T ss_pred hHHHHHHHHHcCCC-----CHHHHhh---ccCCHHHHhc--ccccCCCCCCCCHHHHHHHHHHHHhcCch-hhhhccCcc
Confidence 48999999999998 9999984 5899999865 11222246788999999999999999984 468899999
Q ss_pred cccCCcccccccccccccccc-cCCCCchhhhhcHHHHHHHHHHHHHHHhCCCce--eeecCchHHHHHHHHHHHHHHHH
Q 001531 597 CTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRAYHK 673 (1058)
Q Consensus 597 ~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~qG~~~~~~el~~~lael~G~~~~--~l~~~sGa~ge~a~llair~y~~ 673 (1058)
|..++|+.+....+++|+|++ |+|||| |++||.+|+++|+|+++|+||||+.+ |+++.+++.|| |++|+.|.
T Consensus 85 Y~~~~P~vI~rnile~pewyTaYTPYQp-EISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAE-Am~ma~r~--- 159 (450)
T COG0403 85 YDTYTPPVILRNILENPEWYTAYTPYQP-EISQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAE-AMLMAKRV--- 159 (450)
T ss_pred cCCcCcHHHHHHhhcCccccccCCCCch-hhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHHHH-HHHHHHHh---
Confidence 999999999977799999998 999999 99999999999999999999999964 68888888887 88888775
Q ss_pred HcCCCCCCEEEEcCCCCCccHHH----HHhCCcEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCCcccccccH
Q 001531 674 ARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGI 749 (1058)
Q Consensus 674 ~~G~~~r~~Vlip~saHg~~pa~----a~~~G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~G~i~~dI 749 (1058)
.+ .++++++|+...|...-.. ++.+|++++.++.+ |+++|+++ + ..++.+++++|||++|.+++|+
T Consensus 160 ~k--~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-----d~~~l~~~-~--~~~~~gv~vQyP~~~G~~~~d~ 229 (450)
T COG0403 160 TK--KKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-----DLDDLESA-D--DGDVFGVLVQYPNTFGIVEEDL 229 (450)
T ss_pred hc--CcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-----hhhhhhhc-c--ccCeEEEEEecCCCCCccchhH
Confidence 22 2478999998755333222 45689999999885 88899888 4 3699999999999999766689
Q ss_pred HHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCC
Q 001531 750 DEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGG 829 (1058)
Q Consensus 750 ~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d 829 (1058)
++|.+.+|++|++++| ++++.+++.+.+||++|+||++++. +.|++|+|||||+.|++++++++.+++|||++|.+.|
T Consensus 230 ~~l~~~~h~~~al~~v-~aDplaL~LL~pPGe~GADIvvG~~-QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D 307 (450)
T COG0403 230 RALIEAAHSAGALVIV-AADPLALGLLKPPGEFGADIVVGSA-QRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVD 307 (450)
T ss_pred HHHHHHHhhcCCEEEE-EechhHhhccCCccccCCceEEecC-cccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeec
Confidence 9999999999999999 8999999999999999999999988 8899999999999999999999999999999999877
Q ss_pred C-CCC-------------CCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCe
Q 001531 830 I-PAP-------------EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPI 892 (1058)
Q Consensus 830 ~-g~~-------------~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~---~~v 892 (1058)
. |++ +|+|+|+|||++ |++++.+|.+|+.++|++|+++++++++.++.||+++|++. +++
T Consensus 308 ~~G~~A~rLaLQTREQHIRReKATSNICTn---QaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~ 384 (450)
T COG0403 308 AAGKRAFRLALQTREQHIRREKATSNICTN---QALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVEL 384 (450)
T ss_pred CCCCchhhhhHHHHHHHHhhhccchhhhHH---HHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEe
Confidence 6 543 378999999984 99999999999999999999999999999999999999953 455
Q ss_pred eeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001531 893 LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 968 (1058)
Q Consensus 893 ~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i 968 (1058)
.+ ..+|.+|+++++. .....+.++....|+....+. .+++.|++||.+|+++||.|++++...
T Consensus 385 ~~----~~fFdt~~v~~~~------~~~~~l~~~~~~~G~~L~~~~---~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 385 VF----DHFFDTFTVRVPE------EVAEALLAAAIAGGINLRRVD---ADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred cc----ccceeeEEEecch------hHHHHHHHHHHhcCCceeeec---CCceEEEeecccCHHHHHHHHHHHhhh
Confidence 43 2588899988751 235667777777888776554 468999999999999999999998754
No 12
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=100.00 E-value=1e-54 Score=516.16 Aligned_cols=422 Identities=38% Similarity=0.625 Sum_probs=377.9
Q ss_pred ccCCCCCHHHHHHHHHHhCCCCHHHhhhccCCCcc-ccCCCCCCCCCCCCCHHHHHHHHHHHhcCCcc---cccccCCCC
Q 001531 100 RRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKV---YKSFIGMGY 175 (1058)
Q Consensus 100 ~~~i~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~sE~e~~~~~~~la~~n~~---~~~~lG~g~ 175 (1058)
++|||++++|+++||++||++|+||||+ .||+.+ ++.+++|| +++||.++++++.+++++|.. ..+++|.|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~lp---~~~~~~~v~~~~~~~~~~~~~~~~~~~~lg~g~ 77 (447)
T PRK00451 2 MPYIPHTEEDIREMLDAIGVKSIDELFA-DIPEELRLKRPLDLP---PGLSEMELLRHLRELAAKNKTAEEYPSFLGAGA 77 (447)
T ss_pred CCCCCCCHHHHHHHHHHhCCCCHHHHHH-hCCHHHHhCCCCCCC---CCCCHHHHHHHHHHHHhcCCCcCcCcccCcccc
Confidence 6899999999999999999999999995 599999 77778898 567999999999999987754 567999999
Q ss_pred CCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCC
Q 001531 176 YNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKK 255 (1058)
Q Consensus 176 ~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~g 255 (1058)
+++.+|..+. .++.+++|+++|+||+++.++|.++++.|+++++++++|++.+++++++|||++++++++++... ++
T Consensus 78 ~~~~~p~~~~-~~~~~~~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~--~g 154 (447)
T PRK00451 78 YDHYIPAVVD-HIISRSEFYTAYTPYQPEISQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMAVRIT--KR 154 (447)
T ss_pred cCCcCcHHHH-HHHhchhHHHhcCCCCCccchHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhc--CC
Confidence 9999999985 78888899999999999999999999999999999999999989999999999999999887543 78
Q ss_pred CEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch-------hhhc-cCCCEeEEEEEcCCCceeeccHHHHHHHHHhcCc
Q 001531 256 KTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-------DIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGV 327 (1058)
Q Consensus 256 d~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~-------~l~~-l~~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~ga 327 (1058)
++|++++..|+++...++.+++..|++++.++.+ ++++ ++++|++|++++||.+|.+.|+++|+++||++|+
T Consensus 155 ~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~d~~~l~~~i~~~t~~v~l~~pn~tG~v~~l~~I~~~a~~~~~ 234 (447)
T PRK00451 155 KKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDGVTDLEALEAAVDDDTAAVVVQYPNFFGVIEDLEEIAEIAHAGGA 234 (447)
T ss_pred CEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCCCCCHHHHHHhcCCCeEEEEEECCCCCCeeCCHHHHHHHHHHCCC
Confidence 9999999999999999988787789999988764 3555 7889999999999999999999999999999999
Q ss_pred EEEEEeccccccCCCCCCcccceEEEecCcccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccc
Q 001531 328 KVVMATDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTR 407 (1058)
Q Consensus 328 lliV~a~~~slg~l~~p~~~GaDivvgs~k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtr 407 (1058)
+++|+.|.+++|.+..++++|+|++++++|+|+.|+.+|||++||+++++++++.+|++++|++.+..++.+|.+.++.+
T Consensus 235 ~~iv~~d~~~~g~~~~~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 314 (447)
T PRK00451 235 LFIVGVDPVSLGLLKPPGEYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAR 314 (447)
T ss_pred EEEEEcChHHhccCCCcccCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeecccc
Confidence 99987677788888888999999999999999999999999999999999999999999999987767888899999999
Q ss_pred cccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC-HH
Q 001531 408 EQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AH 486 (1058)
Q Consensus 408 eq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~-~~ 486 (1058)
++++||+++|+|+|+++++.++.++.++.+++++|++++.+++.+++++++++|++++|+++...+++..+.++++. ..
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~v~~~~~~~ 394 (447)
T PRK00451 315 EQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFDGPFFNEFVVRLPKPAE 394 (447)
T ss_pred ccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecCCCeEEEEEEecCCCHH
Confidence 99999999999999999888888888888899999999999999999999999999966888755566666666543 78
Q ss_pred HHHHHHHHcCceee----ecc---CCeEEEEeccCCCHHHHHHHHHHHh
Q 001531 487 AIASAAYKIEMNLR----VVD---SNTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 487 ~l~~~L~~~GI~~~----~~~---~~~lris~~~~~t~edid~ll~al~ 528 (1058)
++.++|.++||... ... .+.+|+|+++++|++|+++|+++|.
T Consensus 395 ~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~ 443 (447)
T PRK00451 395 EVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALG 443 (447)
T ss_pred HHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHH
Confidence 99999999988632 111 3689999999999999999999985
No 13
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=100.00 E-value=3.7e-55 Score=537.55 Aligned_cols=401 Identities=20% Similarity=0.288 Sum_probs=347.0
Q ss_pred CCCHHHHHHHHHHHhCCCCCCCCHHhhhhhhhccCCCCccCCCCCCCCCccCCCCCHHHHHHHHHHHhcCccCcCccccc
Q 001531 514 TTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIP 593 (1058)
Q Consensus 514 ~~t~edid~ll~al~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~~~~p~~~~~~sE~e~~r~~~~l~~~~~~~~~~~i~ 593 (1058)
.-+++|++.|++.++.+ |+|+|+. +.||+++++++++ .+| +++||.|++||+++|+++|... .++|+
T Consensus 4 g~~~~~~~~ML~~iG~~-----s~d~l~~---~~iP~~i~~~~~l-~lp---~~~sE~e~~~~~~~la~~N~~~-~~fig 70 (939)
T TIGR00461 4 GPSPSDQKKMLKTMGYS-----DLNALIE---QLVPPNILKRRPL-QLE---APSKEYEALAHLKKIASKNHKF-KSYIG 70 (939)
T ss_pred CcCHHHHHHHHHhcCCC-----CHHHHhh---ccCCHHHhcCCCC-CCC---CCCCHHHHHHHHHHHHhcCCCc-cccCC
Confidence 34789999999999987 8999985 4499999988875 665 6789999999999999999874 57899
Q ss_pred ccccccCCcccccccccccccccc-cCCCCchhhhhcHHHHHHHHHHHHHHHhCCCce--eeecCchHHHHHHHHHHHHH
Q 001531 594 LGSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRA 670 (1058)
Q Consensus 594 lGs~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~qG~~~~~~el~~~lael~G~~~~--~l~~~sGa~ge~a~llair~ 670 (1058)
.|.+.+++|+.+.+..+++++|++ |||||| |++||++|+++|+|+++++||||+.+ ++++.+|+.+| +++++.|
T Consensus 71 ~G~y~~~~p~~i~r~v~~~p~~~TaytPyQ~-EisQG~Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aE-a~~~a~~- 147 (939)
T TIGR00461 71 MGYYGTILPPVIQRNLLENPGWYTAYTPYQP-EISQGRLEALLNFQTVVSDLTGLPVANASLLDEGTAAAE-AMALSFN- 147 (939)
T ss_pred CCcCCCcCChHHHHHHHhCchhhhcCCCCCh-hhhhHHHHHHHHHHHHHHHHHCCChhhhhccchhhHHHH-HHHHHHH-
Confidence 999999999999977789999877 999999 89999999999999999999999965 79999999888 7777654
Q ss_pred HHHHcCCCCCCEEEEcCCCCCccHH----HHHhCCcEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCCccccc
Q 001531 671 YHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYE 746 (1058)
Q Consensus 671 y~~~~G~~~r~~Vlip~saHg~~pa----~a~~~G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~G~i~ 746 (1058)
..++ ++++|+|+++.|+..-. +++..|++++.++ +++|++++ +++++|+++||++|.++
T Consensus 148 --~~~~--~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~--------~~~l~~~~-----~~~~v~~q~Pn~~G~ie 210 (939)
T TIGR00461 148 --VSKK--KANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD--------CSDIKKAV-----DVFGCLLQYPATDGSIL 210 (939)
T ss_pred --hhcC--CCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc--------HHHHhhcC-----CEEEEEEECCCCCeEEe
Confidence 2333 46789999998744432 2468999999874 45565544 58999999999999999
Q ss_pred ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCccc
Q 001531 747 EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVS 826 (1058)
Q Consensus 747 ~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~ 826 (1058)
|+++|++++|++|+++++ ++++++++++.+||++|+||+++ .||+|++|||||||+.|++++++++.+++||+++|+
T Consensus 211 -d~~~i~~~~h~~gal~~~-~ad~~al~ll~~Pge~GaDi~vg-~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~ 287 (939)
T TIGR00461 211 -DYKQLIDALHSHKSLVSV-AADLMALTLLTPPGHYGADIVLG-SSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGV 287 (939)
T ss_pred -cHHHHHHHHHHcCCEEEE-EechHHhCCcCCHHHcCCcEEee-CCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeE
Confidence 899999999999999999 68999999999999999999955 679999999999999999999999999999999997
Q ss_pred CCCC-C---------CC----CCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CC
Q 001531 827 TGGI-P---------AP----EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YP 891 (1058)
Q Consensus 827 ~~d~-g---------~~----~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~ 891 (1058)
+.|. | +| +|+++|+|||+ ++++++.+|++|+.++|++|+++++++++.++.||+++|++. ++
T Consensus 288 s~D~~G~~~~~l~LqtReqhIrRekAtSNICt---~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~ 364 (939)
T TIGR00461 288 SKDALGNTALRLALQTREQHIRRDKATSNICT---AQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDPHE 364 (939)
T ss_pred EecCCCCccceeecccccccccccccCcchhH---HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 6543 2 22 47899999998 589999999999999999999999999999999999999884 66
Q ss_pred eeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q 001531 892 ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALI 966 (1058)
Q Consensus 892 v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~ 966 (1058)
+++ .++|++|++++. +.++++|.++|.++||++.... .+++++|+||.+|++|||.|++++.
T Consensus 365 ~~~----~~fF~~~~v~~~------~~~~~~i~~~~~~~gi~l~~~~---~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 365 LIN----KTWFDTLTVKVG------NGISSELLKAAEEFNINLRAVD---TTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred ccC----CCccceEEEEeC------CCCHHHHHHHHHHCCCeeeecC---CCEEEEEeecCCCHHHHHHHHHHhc
Confidence 654 268899999874 2468899999999999976422 4789999999999999999999995
No 14
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=100.00 E-value=1.1e-53 Score=509.07 Aligned_cols=380 Identities=20% Similarity=0.300 Sum_probs=323.9
Q ss_pred hhccCCCcc-ccCCCCCCCCCCCCCHHHHHHHHHHHhcCCcc-cccccCCCCCCCCChHHHHHHHHhCCCcccccCCChh
Q 001531 126 IDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKV-YKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQA 203 (1058)
Q Consensus 126 ~~~~ip~~~-~~~~~~lp~~~~~~sE~e~~~~~~~la~~n~~-~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~ 203 (1058)
++++||+++ ++++++|| + +||.|+++|+++|+++|.. ..+|+|+|++...+|+.|.++++++++| ++||||||
T Consensus 30 ~~~~ip~~~~~~~~~~~~---~-~se~~~~~~~~~l~~~n~~~~~~~~g~G~~~~~~~p~i~~~~~~~~~~-~~~tpYq~ 104 (481)
T PRK04366 30 LESLLPEELLRKEPPELP---E-VSELEVVRHYTRLSQKNYGVDTGFYPLGSCTMKYNPKINEKVARLPGF-AELHPLQP 104 (481)
T ss_pred ccccCCHHHhcCCCCCCC---C-CCHHHHHHHHHHHHhcCCCCCcceecCcccCCCCCHHHHHHHHhCcch-hcCCCCCC
Confidence 456799999 88889998 4 9999999999999999987 6799999977777888888899999998 59999999
Q ss_pred H-HhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHH-hc---ccc--CCCCEEEEcCCCCHHHHHHHHHhh
Q 001531 204 E-IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMC-NN---IQK--GKKKTFIIASNCHPQTIDICITRA 276 (1058)
Q Consensus 204 e-~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a-~~---~~~--~~gd~Vlv~~~~Hps~~~~~~~~a 276 (1058)
| ++||+++.++++|+++++++|++ ++++++++++..+++.++ .+ ..+ +++++||++...||++..+++
T Consensus 105 e~~sqG~lel~~~~~~~la~l~G~~--~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~--- 179 (481)
T PRK04366 105 EETVQGALELMYELQEWLKEITGMD--AVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAA--- 179 (481)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhCCC--ceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHH---
Confidence 9 99999999999999999999997 689998888766665432 21 111 134599999999999998864
Q ss_pred cCCCeEEEEeCch--------hhhc-cCCCEeEEEEEcCCCceee-ccHHHHHHHHHhcCcEEEE-Eecccc-ccCCCCC
Q 001531 277 DGFDIKVVVSDLK--------DIDY-KSGDVCGVLVQYPGTEGEV-LDYGDFIKNAHANGVKVVM-ATDLLA-LTILKPP 344 (1058)
Q Consensus 277 ~~~gi~v~~v~~~--------~l~~-l~~~t~~V~v~~pn~~G~i-~dl~~I~~~a~~~galliV-~a~~~s-lg~l~~p 344 (1058)
..|++++.++.+ +|++ ++++|++|++++||++|.+ .|+++|+++||++|++++| ++|+.+ +|.+ +|
T Consensus 180 -~~G~~vv~v~~~~~~~~D~e~L~~~i~~~t~~V~v~~Pn~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~-~~ 257 (481)
T PRK04366 180 -MAGFKVVEIPSNEDGLVDLEALKAAVGEDTAALMLTNPNTLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKA-RP 257 (481)
T ss_pred -HcCCEEEEeecCCCCCcCHHHHHhhcccCCeEEEEeCCCCccccchHHHHHHHHHHHcCCEEEEEecChhhhcccC-Cc
Confidence 468898887652 3555 7789999999999999988 5899999999999999999 677666 4444 78
Q ss_pred CcccceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccch
Q 001531 345 GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTA 423 (1058)
Q Consensus 345 ~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~ 423 (1058)
+++|||++++++ |+|++|+++||||+||+++++++.++||++++|+ +|+ +|++++| |+|||||+++|+ +
T Consensus 258 ~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~----~g~-~~~l~~~-r~~~i~r~~a~t----~ 327 (481)
T PRK04366 258 GDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEK----DGD-RYRLDYD-RPKSIGRVRAFY----G 327 (481)
T ss_pred cccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeec----cCC-ceeeccc-ccccCCCccccc----C
Confidence 999999999999 9999999999999999999999999999999984 355 6999998 999999999985 4
Q ss_pred hHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEc-CCCCccEEEEecC-----C--HHHHHHHHHHc
Q 001531 424 QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ-GLPFFDTVKVKCA-----D--AHAIASAAYKI 495 (1058)
Q Consensus 424 ~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~-~~~~~~~v~i~~~-----~--~~~l~~~L~~~ 495 (1058)
+++.++++..|+.++|++|+++++++++.+++||+++|+++ +++. ..++++++.+..+ + +.++.++|.++
T Consensus 328 ~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~~ 405 (481)
T PRK04366 328 NFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI--YDLPYDRPCMHEFVLSGKKLKETGVRTLDIAKRLLDY 405 (481)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh--CcccCCCCeeEEEEEECccccccCCCHHHHHHHHHHC
Confidence 67888889999999999999999999999999999999986 3333 3456667766542 2 78999999999
Q ss_pred Cceeee-----ccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 496 EMNLRV-----VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 496 GI~~~~-----~~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
||+++. ...+++|+|++++||++|||+|+++|..
T Consensus 406 Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~ 444 (481)
T PRK04366 406 GFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAMKQ 444 (481)
T ss_pred CccCCccccccccCCeEEEcccCCCCHHHHHHHHHHHHH
Confidence 998752 2357899999999999999999999964
No 15
>PRK12566 glycine dehydrogenase; Provisional
Probab=100.00 E-value=5.8e-54 Score=522.92 Aligned_cols=396 Identities=19% Similarity=0.273 Sum_probs=345.3
Q ss_pred CCCHHHHHHHHHHHhCCCCCCCCHHhhhhhhhccCCCCccCCCCCCCCCccCCCCCHHHHHHHHHHHhcCccCcCccccc
Q 001531 514 TTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIP 593 (1058)
Q Consensus 514 ~~t~edid~ll~al~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~~~~p~~~~~~sE~e~~r~~~~l~~~~~~~~~~~i~ 593 (1058)
.-|++|++.|++.++.+ |+|||+. .+||+++|.++++ .+| +++||.|++++|+++++||..+ .++|+
T Consensus 19 g~~~~~~~~ML~~iG~~-----s~d~l~~---~~iP~~ir~~~~l-~lp---~~~sE~e~~~~~~~~a~kN~~~-~~fiG 85 (954)
T PRK12566 19 GPDAAEQQAMLDALGVA-----SRAELIE---QTVPPAIRLNRPL-DLP---AALDEQAALARLRGYAEQNQVW-TSLIG 85 (954)
T ss_pred CCCHHHHHHHHHhcCcc-----CHHHHhh---ccCCHHHhcCCCC-CCC---CCCCHHHHHHHHHHHHhcCCCc-ccccc
Confidence 34789999999999987 8999984 5899999888765 665 6899999999999999999874 68899
Q ss_pred ccccccCCcccccccccccccccc-cCCCCchhhhhcHHHHHHHHHHHHHHHhCCCc--eeeecCchHHHHHHHHHHHHH
Q 001531 594 LGSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRA 670 (1058)
Q Consensus 594 lGs~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~qG~~~~~~el~~~lael~G~~~--~~l~~~sGa~ge~a~llair~ 670 (1058)
.|++.+++|+.+....+++++|++ |||||| |++||.+|+++|+|+|+++||||+. +++++.++|.|| |++|+.|.
T Consensus 86 ~G~y~~~~P~vi~~~i~~~~~~yTaYTPYQp-EisQG~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~aE-A~~ma~~~ 163 (954)
T PRK12566 86 MGYHGTVTPTVILRNVLENPGWYTAYTPYQP-EIAQGRLEALLNFQQMTIDLTGLDLANASLLDEATAAAE-AMALAKRV 163 (954)
T ss_pred ccccCCcCcHHHHHHHHhCchhhhcCCCCCc-hhhhHHHHHHHHHHHHHHHHhCchhhhhhhccchhHHHH-HHHHHHHH
Confidence 999999999999666689999988 999999 9999999999999999999999995 479999999988 88887653
Q ss_pred HHHHcCCCCCCEEEEcCCCCCccHHHH-------HhCCcEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCCcc
Q 001531 671 YHKARGDHHRNVCIIPVSAHGTNPATA-------AMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHG 743 (1058)
Q Consensus 671 y~~~~G~~~r~~Vlip~saHg~~pa~a-------~~~G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~G 743 (1058)
. + .++++|+|+.+.| |.+. +..|++++. ++++++++ +++++|+++|||++|
T Consensus 164 -~--~--~k~~~~~v~~~~h---P~~~~v~~t~~~~~g~~i~~-----------~~~~~~~~---~~~~~v~vq~P~~~G 221 (954)
T PRK12566 164 -A--K--SKSNRFFVDEHCH---PQTLSVLRTRAEGFGFELVV-----------DAVDNLAA---HAVFGALLQYPDTHG 221 (954)
T ss_pred -h--h--cCCCEEEECCCCC---HHHHHHHHHhhhcCCcEEEE-----------cchhhcCC---CCEEEEEEECCCCce
Confidence 1 2 2367899998855 7754 478999875 34455554 689999999999999
Q ss_pred cccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCC
Q 001531 744 VYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHP 823 (1058)
Q Consensus 744 ~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~ 823 (1058)
.++ |+++|++++|++|+++++ ++++++++.+.+||++|+||++++ +|.|++|++||||+.||+++++++.+++|||+
T Consensus 222 ~i~-d~~~i~~~~h~~gal~~~-~~d~laL~ll~~Pge~GADI~vG~-~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRi 298 (954)
T PRK12566 222 EIR-DLRPLIDQLHGQQALACV-AADLLSLLVLTPPGELGADVVLGS-TQRFGVPMGYGGPHAAYFACRDDYKRAMPGRI 298 (954)
T ss_pred EEc-cHHHHHHHHHHcCCEEEE-EeCHHHHhCCCChhhcCCcEEeeC-CCcCCCCCCCCCCCeeeeeehHHHHhhCCCCc
Confidence 998 899999999999999765 899999999999999999999876 59999999999999999999999999999999
Q ss_pred cccCCCC-CCC-------------CCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc
Q 001531 824 VVSTGGI-PAP-------------EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH 889 (1058)
Q Consensus 824 vg~~~d~-g~~-------------~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~ 889 (1058)
+|.+.|. |++ +|+|+|+|||++ |++++.+|.+|+.++|++|+++++++++.++.||+++|++.
T Consensus 299 vG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~---qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~ 375 (954)
T PRK12566 299 IGVSRDARGNTALRMALQTREQHIRREKANSNICTA---QVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAK 375 (954)
T ss_pred cceeecCCCCeeeehhhhHHHHHhhhccccchhhHH---HHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9998776 443 379999999985 89999999999999999999999999999999999999884
Q ss_pred -CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q 001531 890 -YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALI 966 (1058)
Q Consensus 890 -~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~ 966 (1058)
+++.+ .++|++|++++. .++.++.++..++|+...... .+++.|++.|++|.+|++.+++++.
T Consensus 376 g~~~~~----~~fF~~~~v~~~-------~~~~~~~~~a~~~~~n~r~~~---~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 376 GIKRLN----RHFFDTLTLEVG-------GAQAAIIESAEAARINLRILG---RGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred CCcccc----CCccceEEEEcc-------CCHHHHHHHHHHCCCeeEEeC---CCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 66654 368999999863 257789999999999987654 4789999999999999999999885
No 16
>PRK05367 glycine dehydrogenase; Provisional
Probab=100.00 E-value=2e-51 Score=514.28 Aligned_cols=402 Identities=19% Similarity=0.267 Sum_probs=342.7
Q ss_pred ccCCCHHHHHHHHHHHhCCCCCCCCHHhhhhhhhccCCCCccCCCCCCCCCccCCCCCHHHHHHHHHHHhcCccCcCccc
Q 001531 512 DETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSM 591 (1058)
Q Consensus 512 ~~~~t~edid~ll~al~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~~~~p~~~~~~sE~e~~r~~~~l~~~~~~~~~~~ 591 (1058)
+.-+|++|+++|++.++.+ |+|+|++ +.||+++|+++++ .+| +++||.|++|++++|++||.. ..++
T Consensus 14 ~i~~~~~~~~~ml~~~g~~-----s~~~l~~---~~iP~~i~~~~~l-~lp---~~~sE~e~~~~~~~la~~N~~-~~~~ 80 (954)
T PRK05367 14 HIGPSAADQQAMLAALGAD-----SLDALID---QAVPASIRLAEPL-DLP---AALSEAEALAELRAIASKNKV-FRSY 80 (954)
T ss_pred CCCcCHHHHHHHHHhcCCC-----CHHHHhh---hhCCHHHhcCCCC-CCC---CCCCHHHHHHHHHHHHhcCCC-CCcc
Confidence 3456899999999999987 8999985 4599999988875 665 679999999999999999987 4588
Q ss_pred ccccccccCCcccccccccccccccc-cCCCCchhhhhcHHHHHHHHHHHHHHHhCCCce--eeecCchHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVI 668 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~qG~~~~~~el~~~lael~G~~~~--~l~~~sGa~ge~a~llai 668 (1058)
|+.|+|.++.|+.+....+++++|++ |||||| |++||.+|+++++|+++++|+||+.+ ++++++++.+| +++++.
T Consensus 81 ig~G~y~~~~P~vi~~~i~~~~~~~t~ytPyQ~-EisQG~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~e-a~~~a~ 158 (954)
T PRK05367 81 IGQGYYGTHTPPVILRNILENPAWYTAYTPYQP-EISQGRLEALLNFQTMVADLTGLEIANASLLDEATAAAE-AMALAK 158 (954)
T ss_pred cCCCCCCCcCcHHHHHHHHhCcchhhccCCCCh-HHHHHHHHHHHHHHHHHHHHHCCChhhccccccHHHHHH-HHHHhh
Confidence 99999998888878676688999877 999999 89999999999999999999999964 78888888887 777766
Q ss_pred HHHHHHcCCCCCCEEEEcCCCCCccHHH----HHhCCcEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCCccc
Q 001531 669 RAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGV 744 (1058)
Q Consensus 669 r~y~~~~G~~~r~~Vlip~saHg~~pa~----a~~~G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~G~ 744 (1058)
+. .++ ++++|++++..|+.+... ++..|++|+.++.+.+. + + ++++++++++||++|.
T Consensus 159 ~~---~~~--~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d~--~--------~---~~~~~vlvq~p~~~G~ 220 (954)
T PRK05367 159 RV---SKS--KSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKAL--D--------H---DDVFGVLLQYPGTSGE 220 (954)
T ss_pred hh---ccC--CCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccCC--C--------c---ccEEEEEEecCCCCee
Confidence 52 221 257999999887655432 46799999999975421 1 2 5789999999999999
Q ss_pred ccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCc
Q 001531 745 YEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPV 824 (1058)
Q Consensus 745 i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~v 824 (1058)
++ |+++|+++||++|++++||+ +.++++.+.+|+++|+||+++++|||. .|+|+||||.|++++++++.+++|++++
T Consensus 221 i~-d~~~i~~~ah~~Gal~~vda-~~~Al~~l~~pge~GaDi~vgs~qkfg-~P~g~GGP~aGflavr~~~~r~lpgriv 297 (954)
T PRK05367 221 VR-DYTALIAAAHARGALVAVAA-DLLALTLLTPPGEMGADIAVGSAQRFG-VPMGFGGPHAAYFAVRDAYKRSMPGRIV 297 (954)
T ss_pred ec-cHHHHHHHHHHcCCEEEEEe-hhhhccCCCChhhcCCCEEEeeCcccC-CCCCCCCCCEEEEEECHHHHhhCCCCee
Confidence 99 89999999999999999985 677888899999999999999999876 9999999999999999999999999999
Q ss_pred ccCCCC-CC-------------CCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-
Q 001531 825 VSTGGI-PA-------------PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH- 889 (1058)
Q Consensus 825 g~~~d~-g~-------------~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~- 889 (1058)
|++.|. |. .+++++|+|+|+ ++++.+.++++|+.++|++|++++++++..+++|++++|++.
T Consensus 298 G~s~d~~g~~~~~lalqtReqhiRrekaTsNict---~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G 374 (954)
T PRK05367 298 GVSVDAAGNPALRLALQTREQHIRREKATSNICT---AQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALG 374 (954)
T ss_pred eeecccCCCcccccccccccccccccccccccch---HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 976543 21 146899999998 488888899999999999999999999999999999999873
Q ss_pred CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q 001531 890 YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALI 966 (1058)
Q Consensus 890 ~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~ 966 (1058)
+++.. ..+++++++++. .+..+|.++|.++||+++... .+++|||++|++|++|||+|+++|.
T Consensus 375 ~~~~~----~~~f~~~~~~~~-------~~~~~i~~~l~~~gi~~~~~~---~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 375 LEVVH----DSFFDTLTVEVG-------GDAAAVLARALAAGINLRRVD---DDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred cccCC----CCCCCeEEEeCC-------CCHHHHHHHHHHCCceecccc---CCEEEEEecccCCHHHHHHHHHHHc
Confidence 56542 246677777753 368899999999999986443 5789999999999999999999997
No 17
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=100.00 E-value=1.4e-48 Score=485.93 Aligned_cols=403 Identities=20% Similarity=0.273 Sum_probs=341.7
Q ss_pred CCCHHHHHHHHHHHhCCCCCCCCHHhhhhhhhccCCCCccCCCCCCCCCccCCCCCHHHHHHHHHHHhcCccCcCccccc
Q 001531 514 TTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIP 593 (1058)
Q Consensus 514 ~~t~edid~ll~al~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~~~~p~~~~~~sE~e~~r~~~~l~~~~~~~~~~~i~ 593 (1058)
-+|++|++.|++.++.+ |+|+|+. ++||+++ |.+++ .+|.|++++||.|++|||++|+.+|..+ .++++
T Consensus 41 ~~~~~~~~~ML~~ig~~-----s~d~l~~---~~iP~~i-~~~~l-~lp~~~~~~sE~e~~~~~~~la~kN~~~-~~fiG 109 (993)
T PLN02414 41 SATPEEQKAMAEYCGFD-----SLDALID---ATVPKSI-RLDSM-KLSKYDEGLTESQMLEHMKSLASKNKVF-KSYIG 109 (993)
T ss_pred CcCHHHHHHHHHhcCcc-----CHHHHhh---ccCCHHH-hcCCC-CCCCCCCCCCHHHHHHHHHHHHhcCCcc-ccccC
Confidence 35899999999999987 8999984 5799999 45554 7775668999999999999999999864 47888
Q ss_pred ccccccCCcccccccccccccccc-cCCCCchhhhhcHHHHHHHHHHHHHHHhCCCc--eeeecCchHHHHHHHHHHHHH
Q 001531 594 LGSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRA 670 (1058)
Q Consensus 594 lGs~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~qG~~~~~~el~~~lael~G~~~--~~l~~~sGa~ge~a~llair~ 670 (1058)
.|.|.+++|+.+....+++++|++ |||||| |++||.+|.++++|+++|+|+|++. +++++++++.+| +++++.+.
T Consensus 110 ~G~y~~~~P~~v~~~i~~~~~~~TaytPYqa-EisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaae-a~~~a~~~ 187 (993)
T PLN02414 110 MGYYNTHVPPVILRNILENPGWYTQYTPYQA-EIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAE-AMAMCNNI 187 (993)
T ss_pred CCCCCccCCHHHHHHHHhChHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHH-HHHHHHhc
Confidence 899999999999666689999876 999999 9999999999999999999999996 578888888777 77776642
Q ss_pred HHHHcCCCCCCEEEEcCCCCCccHHH----HHhCCcEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCCccccc
Q 001531 671 YHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYE 746 (1058)
Q Consensus 671 y~~~~G~~~r~~Vlip~saHg~~pa~----a~~~G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~G~i~ 746 (1058)
.+| ++++||+++..|+.+-.. ++..|++|+.++.+.. | .. .++++++++++||++|.+.
T Consensus 188 ---~~g--~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~---~------~~---~~~v~~vlvq~P~~~G~v~ 250 (993)
T PLN02414 188 ---LKG--KKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF---D------YS---SGDVCGVLVQYPATDGEVL 250 (993)
T ss_pred ---ccC--CCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh---c------cc---cCceEEEEEecCCCCeEEc
Confidence 233 468899999888665433 4568999999987431 1 11 2578899999999999998
Q ss_pred ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCccc
Q 001531 747 EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVS 826 (1058)
Q Consensus 747 ~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~ 826 (1058)
|+++|+++||++|++++| ++|+++++++.+|+++|+||++++.|||. .|+|||||+.|++++++++.+.+||+++|+
T Consensus 251 -dv~~I~~~ah~~GaL~iV-aad~lal~~l~~pge~GADi~vgsgqKwg-~P~G~GGP~aGflavr~~~~r~~PgriVG~ 327 (993)
T PLN02414 251 -DYAEFVKNAHANGVKVVM-ATDLLALTMLKPPGEWGADIVVGSAQRFG-VPMGYGGPHAAFLATSQEYKRLMPGRIIGV 327 (993)
T ss_pred -CHHHHHHHHHHcCCEEEE-EECHHHhcCCCCHhhccCcEEEECCCccc-cCCCCCCCCeeEEEECHHHHhhCCCcccCc
Confidence 899999999999999999 99999999998899999999999999985 999999999999999999999999999998
Q ss_pred CCCC-CC---------C----CCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CC
Q 001531 827 TGGI-PA---------P----EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YP 891 (1058)
Q Consensus 827 ~~d~-g~---------~----~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~ 891 (1058)
+.|. |. | +++++|+|+|++ +++.+.++.+|+.++|++|++++++++..++.|++++|++. ++
T Consensus 328 s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~---qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~~ 404 (993)
T PLN02414 328 SVDSSGKPALRMAMQTREQHIRRDKATSNICTA---QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLGFQ 404 (993)
T ss_pred ccCCCCCcccccccccccchhhhcccccchhHH---HHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 6543 21 2 367999999984 77888888899999999999999999999999999999874 55
Q ss_pred eeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 001531 892 ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALIS 967 (1058)
Q Consensus 892 v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~ 967 (1058)
+.. .+++++++|+++ +..++.++|.++||.+.... .+.+|+|+++.+|++|||+|+++|..
T Consensus 405 ~~~----~~~f~~vt~~~~--------~~~~v~~~L~~~gI~l~~~~---~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 405 VQS----LPFFDTVKVKCS--------DADAIADAAAKVGINLRVVD---ANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred cCC----CCCcCeEEEecC--------CHHHHHHHHHHCCCeeEEec---CCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 532 267788888763 35889999999999876543 46899999999999999999999974
No 18
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=100.00 E-value=3.9e-43 Score=395.77 Aligned_cols=397 Identities=22% Similarity=0.307 Sum_probs=332.8
Q ss_pred CHHHHHHHHHHHhCCCCCCCCHHhhhhhhhccCCCCccCCCCCCCCCccCCCCCHHHHHHHHHHHhcCccCcCccccccc
Q 001531 516 TLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLG 595 (1058)
Q Consensus 516 t~edid~ll~al~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~~~~p~~~~~~sE~e~~r~~~~l~~~~~~~~~~~i~lG 595 (1058)
++.|..++++.++.+ ++++|++ ..+|.+++.++++ .+ +++++|.||+++++.+++||.. .+++|+.|
T Consensus 60 ~~~dq~~ml~tlG~~-----dl~~l~~---~~VP~~Ir~~~~l-~~---~~~~~E~eml~~l~~ia~kNk~-~ksfIGmG 126 (1001)
T KOG2040|consen 60 SPTDQQQMLDTLGYK-----DLDELIE---KTVPKSIRLKRPL-KM---DKPLCESEMLQHLEDIASKNKI-WKSFIGMG 126 (1001)
T ss_pred CchHHHHHHHhcChh-----hHHHHHH---hhcchhhcccchh-cC---CCCcCHHHHHHHHHHHHhhhhH-HHHhhccc
Confidence 567888999999876 7888875 6799999988875 55 4789999999999999999985 57899999
Q ss_pred ccccCCcccccccccccccccc-cCCCCchhhhhcHHHHHHHHHHHHHHHhCCCc--eeeecCchHHHHHHHHHHHHHHH
Q 001531 596 SCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYH 672 (1058)
Q Consensus 596 s~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~qG~~~~~~el~~~lael~G~~~--~~l~~~sGa~ge~a~llair~y~ 672 (1058)
++..++++.+.......++|++ |+|||| |++||.++.+-++|.++++|||++. +++...+++.|| |+.++.+.
T Consensus 127 Yyn~~vP~~I~RNilenp~W~TqYTPYQ~-EIsQGRLEsllNyQTmi~dlTGL~~aNASLLDEgTAaaE-Am~l~~~~-- 202 (1001)
T KOG2040|consen 127 YYNTHVPAVILRNILENPGWYTQYTPYQA-EISQGRLESLLNYQTMITDLTGLPMANASLLDEGTAAAE-AMALCNRI-- 202 (1001)
T ss_pred cccccCcHHHHHHhhhCCcceeccCCCch-hhhhhhHHHHhhhHHhhhhccCCcccchhhhccchhHHH-HHHHHHhh--
Confidence 9999999999999899999988 999999 9999999999999999999999985 478888888887 88877664
Q ss_pred HHcCCCCCCEEEEcCCCCCccHHH----HHhCCcEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCCccccccc
Q 001531 673 KARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEG 748 (1058)
Q Consensus 673 ~~~G~~~r~~Vlip~saHg~~pa~----a~~~G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~G~i~~d 748 (1058)
.+|++++|....|.-.-.. +..+|++++..+ +++.. ...+++++++++||++.|.+. |
T Consensus 203 -----~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~--------~~~~~----~s~~~v~gvlvQYP~t~G~i~-d 264 (1001)
T KOG2040|consen 203 -----NKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSD--------IKEAD----YSSKDVSGVLVQYPDTEGSVL-D 264 (1001)
T ss_pred -----cccceEEecCCCCcchhhhhhccccccceeEEecC--------HHHhh----ccccceeEEEEEcCCCCCccc-C
Confidence 3566788876655332222 345677755443 22221 123689999999999999998 8
Q ss_pred HHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCC
Q 001531 749 IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG 828 (1058)
Q Consensus 749 I~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~ 828 (1058)
..++++.+|+.|.++++ ++++.++..+.+||++|+||++++. |.|++|+|+|||+.||++|++++.+.+||+++|.+.
T Consensus 265 ~~el~~~a~~~~s~vv~-atDLLaLtiLrpPgefGaDIavGSs-QRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtk 342 (1001)
T KOG2040|consen 265 FDELVELAHANGSLVVM-ATDLLALTILRPPGEFGADIAVGSS-QRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTK 342 (1001)
T ss_pred HHHHHHHhhccCceEEE-eehhhHHHccCChhhcCceeeeccc-cccCccccCCCchHHHHHHHHHHHhhCCCceEeeee
Confidence 99999999999999888 7789999999999999999999987 899999999999999999999999999999999887
Q ss_pred CC-CC---------C----CCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCee
Q 001531 829 GI-PA---------P----EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPIL 893 (1058)
Q Consensus 829 d~-g~---------~----~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~ 893 (1058)
|. |. | +|+|+|+|||++ |++++.++.+|.-+.|++|++++++++...+-+|+..|++. .++.
T Consensus 343 D~~gk~a~RLALQTREQHIrRDKATSNICTA---QALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~aghel~ 419 (1001)
T KOG2040|consen 343 DALGKEAYRLALQTREQHIRRDKATSNICTA---QALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAGHELQ 419 (1001)
T ss_pred cccccHHHHHHHHHHHHHhhhhccchhhhHH---HHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcchhhc
Confidence 75 32 2 378999999985 89999999999999999999999999999999999999864 4543
Q ss_pred eccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q 001531 894 FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALI 966 (1058)
Q Consensus 894 ~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~ 966 (1058)
. .++|..+-+.+ +.+.+++.++..+++|...... .+++-+++.|+.+++|+|.++..+.
T Consensus 420 ~----k~fFDTLkI~~-------~~s~~~~l~rA~~~~iNlr~~e---d~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 420 H----KPFFDTLKIRC-------GCSAEEVLDRAAKRQINLRLVE---DGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred c----ccccceEEEEe-------cCcHHHHHHHHHhhcCceEEee---cCceEEeecccccHHHHHHHHHHHc
Confidence 2 23444343443 4478999999999998876544 5899999999999999999999886
No 19
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=100.00 E-value=1.2e-38 Score=378.55 Aligned_cols=415 Identities=25% Similarity=0.367 Sum_probs=317.2
Q ss_pred CCCHHHHHHHHHHHhCCCCCCCCHHhhhhhhhccCCCCccCCCCCCCCCccCCCCCHHHHHHHHHHHhcCccCcCccccc
Q 001531 514 TTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIP 593 (1058)
Q Consensus 514 ~~t~edid~ll~al~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~~~~p~~~~~~sE~e~~r~~~~l~~~~~~~~~~~i~ 593 (1058)
-|+++|++.|++.|+.+ |+|||+ +.||+.+|++.+. .+| ++.||.++++++.+++.+|.......++
T Consensus 6 ~~~~~~~~~~~~~~~~~-----~~~~~~----~~~p~~~~~~~~~-~lp---~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 72 (447)
T PRK00451 6 PHTEEDIREMLDAIGVK-----SIDELF----ADIPEELRLKRPL-DLP---PGLSEMELLRHLRELAAKNKTAEEYPSF 72 (447)
T ss_pred CCCHHHHHHHHHHhCCC-----CHHHHH----HhCCHHHHhCCCC-CCC---CCCCHHHHHHHHHHHHhcCCCcCcCccc
Confidence 36799999999999977 899998 4899999988875 666 4569999999999999888665545677
Q ss_pred ccccccC--Cccccccccccccccc-ccCCCCchhhhhcHHHHHHHHHHHHHHHhCCCceeeecCch-HHHHHHHHHHHH
Q 001531 594 LGSCTMK--LNATTEMMPVTWPSFA-NIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAG-AAGEYAGLMVIR 669 (1058)
Q Consensus 594 lGs~t~~--~~~~~~~~~~~~~~f~-~~~P~~p~e~~qG~~~~~~el~~~lael~G~~~~~l~~~sG-a~ge~a~llair 669 (1058)
+|.+.+. .+...... +...++. .|+|++| +.++|.++.+.|+++++++++|++..++...+| +.+.++++++++
T Consensus 73 lg~g~~~~~~p~~~~~~-~~~~~~~~~y~~~~~-~~~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~ 150 (447)
T PRK00451 73 LGAGAYDHYIPAVVDHI-ISRSEFYTAYTPYQP-EISQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMAVR 150 (447)
T ss_pred CcccccCCcCcHHHHHH-HhchhHHHhcCCCCC-ccchHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHH
Confidence 7764443 23333222 3444564 4999998 889999999999999999999998765444444 434344444443
Q ss_pred HHHHHcCCCCCCEEEEcCCCCCccHHHHH----hCCcEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCCcccc
Q 001531 670 AYHKARGDHHRNVCIIPVSAHGTNPATAA----MCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVY 745 (1058)
Q Consensus 670 ~y~~~~G~~~r~~Vlip~saHg~~pa~a~----~~G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~G~i 745 (1058)
. .++++|+++++.|+++...+. ..|++++.++++++ .+|+++|+++++ ++|++|++++||++|.+
T Consensus 151 ~-------~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~d~~~l~~~i~---~~t~~v~l~~pn~tG~v 219 (447)
T PRK00451 151 I-------TKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDG-VTDLEALEAAVD---DDTAAVVVQYPNFFGVI 219 (447)
T ss_pred h-------cCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCC-CCCHHHHHHhcC---CCeEEEEEECCCCCCee
Confidence 1 246789999999988776644 47999999999887 999999999996 78999999999999999
Q ss_pred cccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcc
Q 001531 746 EEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVV 825 (1058)
Q Consensus 746 ~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg 825 (1058)
+ |+++|+++||++|++++++ ++..+++.+..|+++|+|+++++.|| |++|+.+||||+|++++++++.+.+|+.++|
T Consensus 220 ~-~l~~I~~~a~~~~~~~iv~-~d~~~~g~~~~~~~~~~D~~~~s~~k-~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g 296 (447)
T PRK00451 220 E-DLEEIAEIAHAGGALFIVG-VDPVSLGLLKPPGEYGADIVVGEGQP-LGIPLSFGGPYLGFFATRKKLVRQMPGRLVG 296 (447)
T ss_pred C-CHHHHHHHHHHCCCEEEEE-cChHHhccCCCcccCCCCEEEECCCc-CCCCCCCCCCCchHHHhhHHHHhhCCCCEee
Confidence 8 7999999999999999983 23345666667899999999999876 8899999999999999999988888887776
Q ss_pred cCCCC-CC-------------CCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCC
Q 001531 826 STGGI-PA-------------PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYP 891 (1058)
Q Consensus 826 ~~~d~-g~-------------~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~ 891 (1058)
++.+. +. ..+.+++.++++. ....+.++++++..++++|++++.++...+++++.++|+++..
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g 373 (447)
T PRK00451 297 ETVDADGKRGFVLTLQAREQHIRREKATSNICTN---QALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGG 373 (447)
T ss_pred eecccCCCeeeEeecccccccccccccccccccc---HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 64322 11 1234455566542 2233345566778889999999999999999999999987522
Q ss_pred eeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCC---CCC-CCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 001531 892 ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM---SWP-VPGTLMIEPTESESKEELDRYCDALIS 967 (1058)
Q Consensus 892 v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~---~~p-~~~~Lris~te~~t~eeid~fi~aL~~ 967 (1058)
+... .+++++.++++++ .+..++.++|.++|+.+... .+| ..+++|+++++.+|++|||+|+++|++
T Consensus 374 ~~~~--~~~~~~~~~v~~~-------~~~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~ 444 (447)
T PRK00451 374 VELF--DGPFFNEFVVRLP-------KPAEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGE 444 (447)
T ss_pred EEec--CCCeEEEEEEecC-------CCHHHHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 2211 1345555566652 35789999999999875321 122 347999999999999999999999987
Q ss_pred HH
Q 001531 968 IR 969 (1058)
Q Consensus 968 i~ 969 (1058)
++
T Consensus 445 ~~ 446 (447)
T PRK00451 445 VL 446 (447)
T ss_pred Hh
Confidence 64
No 20
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=100.00 E-value=3.2e-39 Score=355.05 Aligned_cols=388 Identities=20% Similarity=0.305 Sum_probs=301.9
Q ss_pred CCCCHHHhhhccCCCcc-ccCCCCCCCCCCCCCHHHHHHHHHHHhcCCccc-ccccCCCCCCCCChHHHHHHHHhCCCcc
Q 001531 118 GLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKVY-KSFIGMGYYNTHVPPVILRNIMENPAWY 195 (1058)
Q Consensus 118 g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~sE~e~~~~~~~la~~n~~~-~~~lG~g~~~~~~p~~i~~~i~~~~~~~ 195 (1058)
|++..++-....+|..+ ++. +.+| ..||.|++||+.+|+++|... +.++=+|..-..+++.+.+.....|+|
T Consensus 19 ~~~l~~~~~~~~L~~~~~r~~-~~~P----e~SE~e~~Rh~~rLs~kn~avd~~m~PLGSCTMK~Np~~e~~~~~~p~f- 92 (496)
T COG1003 19 GYSLPEQVVEEYLPHPVFRRY-PPLP----EHSETEMVRHYTRLSQKDLAVDRGMIPLGSCTMKLNPKAEMKPATWPEF- 92 (496)
T ss_pred ccccccccchhhcCcHHhhcC-CCCc----cccHHHHHHHHHHHHhcccccccCccCCcccccccCchhhcccccccch-
Confidence 44444444444567777 443 3336 799999999999999999875 345566655566888887777788884
Q ss_pred cccCCChhH-HhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHH-HHHHhc-cc--c--CCCCEEEEcCCCCHHH
Q 001531 196 TQYTPYQAE-IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA-MAMCNN-IQ--K--GKKKTFIIASNCHPQT 268 (1058)
Q Consensus 196 t~ytpyq~e-~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea-~~~a~~-~~--~--~~gd~Vlv~~~~Hps~ 268 (1058)
...+||||| ..||.++.+.++|++++++||||. +||.+.+.+..|- -+++++ ++ + +.|+++||+++.|..+
T Consensus 93 ~~iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~Da--vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTN 170 (496)
T COG1003 93 ANIHPFQPEEQVQGYLELIYELQEWLKEITGMDA--VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTN 170 (496)
T ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHHhcCCce--eeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCC
Confidence 668999999 899999999999999999999998 9999877776663 344433 33 2 2578999999999544
Q ss_pred HHHHHHhhcCCCeEEEEeC--------chhhhc-cCCCEeEEEEEcCCCceeec-cHHHHHHHHHhcCcEEEE-Eecccc
Q 001531 269 IDICITRADGFDIKVVVSD--------LKDIDY-KSGDVCGVLVQYPGTEGEVL-DYGDFIKNAHANGVKVVM-ATDLLA 337 (1058)
Q Consensus 269 ~~~~~~~a~~~gi~v~~v~--------~~~l~~-l~~~t~~V~v~~pn~~G~i~-dl~~I~~~a~~~galliV-~a~~~s 337 (1058)
=+-. ...|++|++|+ ++||++ ++++++++++||||+.|.++ +|.+|++++|++|++|++ ||++.+
T Consensus 171 PASA----am~G~~VV~V~~~~~G~VDlddLk~k~~~~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA 246 (496)
T COG1003 171 PASA----AMAGFKVVVVKCDENGNVDLDDLRAKAEDNLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNA 246 (496)
T ss_pred hhhH----hhcCceEEEEecCCCCCccHHHHHHHhccceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhh
Confidence 4332 23488888764 467877 78999999999999999997 899999999999999999 889888
Q ss_pred ccCCCCCCcccceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeeccccccccccccc
Q 001531 338 LTILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKA 416 (1058)
Q Consensus 338 lg~l~~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irReka 416 (1058)
+..+..||++|+||+..+. |+|.+|+|.||||.|-+.|+..+..+||++. .. .+ +.. |.+....+ ..+.|-
T Consensus 247 ~vG~~rPGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~-~~-~~--~~~-y~~~~~~~-~s~g~~-- 318 (496)
T COG1003 247 IVGLARPGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPV-VY-HD--VGE-YRLDYDGK-KSIGVS-- 318 (496)
T ss_pred hhccccccccccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCc-cc-CC--Ccc-ccccCCCC-ccceee--
Confidence 8888899999999999999 9999999999999999999999999999865 21 11 111 33322111 222222
Q ss_pred CCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEc-CC--CCccEEEEecC------C--H
Q 001531 417 TSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ-GL--PFFDTVKVKCA------D--A 485 (1058)
Q Consensus 417 Tsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~-~~--~~~~~v~i~~~------~--~ 485 (1058)
.+++.+.+ .-..+-+|+..+|++||++..+....+|+|++++|+.. +++. .. ..-++|+++.. + +
T Consensus 319 ~a~~Gs~~--il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~--y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~ 394 (496)
T COG1003 319 AAPYGSAS--ILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGY--YPVPYTGENRVAHECILDARPLKKETGVRA 394 (496)
T ss_pred ccccCcch--HHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc--CccccCCCCcceeEEEeechHhHhhcCCcH
Confidence 23333322 23556779999999999999999999999999999873 7764 22 24678888765 3 7
Q ss_pred HHHHHHHHHcCceeee-----ccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 486 HAIASAAYKIEMNLRV-----VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 486 ~~l~~~L~~~GI~~~~-----~~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
.+|+|+|.+.|++... +..++++|.+||..+++++|+|+++|..
T Consensus 395 ~DvAKrLlD~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~ 443 (496)
T COG1003 395 LDVAKRLLDYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIA 443 (496)
T ss_pred HHHHHHHHhcCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHH
Confidence 8999999999997643 3579999999999999999999999963
No 21
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=100.00 E-value=4.3e-35 Score=342.78 Aligned_cols=375 Identities=44% Similarity=0.650 Sum_probs=302.2
Q ss_pred HHHHHHHHHHHhcCCcccc---cccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCC
Q 001531 150 ESQMIEHMQKLASMNKVYK---SFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL 226 (1058)
Q Consensus 150 E~e~~~~~~~la~~n~~~~---~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~ 226 (1058)
|.||++|+++++++|.... ..+|.|..+|..|.++.+...+. ...+.|+||.+..++|..+...++++.+++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~ 79 (398)
T cd00613 1 ETEVLRHLKRLASKNKALDQSMSFLGSGTYKHNPPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTGM 79 (398)
T ss_pred CHHHHHHHHHHHhcCcCcccCcccccccccCCcCcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCC
Confidence 5699999999998887542 57888888899999987434333 4468899999989999999999999999999999
Q ss_pred CCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cCCC
Q 001531 227 PMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGD 297 (1058)
Q Consensus 227 ~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~--------~~l~~-l~~~ 297 (1058)
+..++.++.+|+.++++++++.....++||+|++++..|+++...+....+..|++++.++. +++++ ++++
T Consensus 80 ~~~~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~ 159 (398)
T cd00613 80 DVANASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVSEE 159 (398)
T ss_pred CccceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcCCC
Confidence 87677788777766676555443321248999999999999999987665566788887764 34555 7788
Q ss_pred EeEEEEEcCCCceeeccH-HHHHHHHHhcCcEEEEEecccccc-CCCCCCcccceEEEecC-cccccccCCCCCceEEEE
Q 001531 298 VCGVLVQYPGTEGEVLDY-GDFIKNAHANGVKVVMATDLLALT-ILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLA 374 (1058)
Q Consensus 298 t~~V~v~~pn~~G~i~dl-~~I~~~a~~~galliV~a~~~slg-~l~~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~ 374 (1058)
|++|++++|+++|.+.|+ ++|+++||++|++++|+. .++.+ ....++++|+|++++++ |++ .|++.|||++||++
T Consensus 160 t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~-~~~~~~~~~~~~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~ 237 (398)
T cd00613 160 VAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDG-DNLNLTGLKPPGEYGADIVVGNLQKTG-VPHGGGGPGAGFFA 237 (398)
T ss_pred eEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEe-ccccccCCCChHHcCCCEEEeeccccC-CCCCCCCCceeEEE
Confidence 999999999989999985 999999999999999954 23322 34567889999999999 666 99999999999999
Q ss_pred EehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Q 001531 375 TSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLA 454 (1058)
Q Consensus 375 ~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a 454 (1058)
+++++.+.+++..+|+..+..+.+.|.+.+..+..+.|||++|+|+++...+.+..++..+..++.+|++++.+++.+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~ 317 (398)
T cd00613 238 VKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNA 317 (398)
T ss_pred EhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 99999999999888875443344557777766778889999999999988887777777788889999999999999999
Q ss_pred HHHHHHHhcCCCeEEcCCCCccEEEEecC---C--HHHHHHHHHHcCceeeec---cCCeEEEEeccCCCHHHHHHHHHH
Q 001531 455 GTFALGLKKLGTVEVQGLPFFDTVKVKCA---D--AHAIASAAYKIEMNLRVV---DSNTVTASFDETTTLEDVDKLFIV 526 (1058)
Q Consensus 455 ~~l~~~L~~~G~~~l~~~~~~~~v~i~~~---~--~~~l~~~L~~~GI~~~~~---~~~~lris~~~~~t~edid~ll~a 526 (1058)
++++++|+++++......+++..+.+..+ + +.++.+.|.++||.+... ..+.+|+|++.+||++|||+++++
T Consensus 318 ~~l~~~L~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi~~~~~~~~~~~~lRis~~~~~t~edid~~~~~ 397 (398)
T cd00613 318 NYLAKRLKEVGGVLPFNGPFFHEFVLRLPPLYGIRAEDLAKALIDGGFHAPTMYLPVDGTLMIEPTETETKEELDALLEA 397 (398)
T ss_pred HHHHHHHHhcCCcccCCCCeeEEEEEEcCCcchHHHHHHHHhhhhcCccccccccCCCCeEEEEcCCCCCHHHHHHHHHh
Confidence 99999999987333223344445566654 3 678999999999987653 457899999999999999999987
Q ss_pred H
Q 001531 527 F 527 (1058)
Q Consensus 527 l 527 (1058)
|
T Consensus 398 L 398 (398)
T cd00613 398 L 398 (398)
T ss_pred C
Confidence 5
No 22
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=100.00 E-value=5e-34 Score=333.81 Aligned_cols=375 Identities=44% Similarity=0.664 Sum_probs=282.8
Q ss_pred HHHHHHHHHHHhcCccCcCcccccccccccCCccccccccccc--ccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCC
Q 001531 570 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTW--PSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGF 647 (1058)
Q Consensus 570 E~e~~r~~~~l~~~~~~~~~~~i~lGs~t~~~~~~~~~~~~~~--~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~ 647 (1058)
|+||+||+++++++|...+.+++.+|.|.+.++.......+.. ..+..|+||.| ..+.|..++..++++++++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~la~~~g~ 79 (398)
T cd00613 1 ETEVLRHLKRLASKNKALDQSMSFLGSGTYKHNPPAVIKRNILENEFYTAYTPYQP-EISQGRLQALFELQTMLCELTGM 79 (398)
T ss_pred CHHHHHHHHHHHhcCcCcccCcccccccccCCcCcHHHHHHhccccCcccCCCCCh-hhhhhHHHHHHHHHHHHHHHHCC
Confidence 5799999999999999888888899988887766555432211 12334777766 66789999999999999999998
Q ss_pred C--ceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCC----cEEEEEcCCCCCCCCHHHHH
Q 001531 648 D--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCG----MKIVSVGTDAKGNINIEELR 721 (1058)
Q Consensus 648 ~--~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G----~~vv~V~~d~~g~iD~e~L~ 721 (1058)
+ .+.+.+++|++++ +.+++++. .+ +++++|+++++.|+.+...+...| ++++.+++++++.+|+++|+
T Consensus 80 ~~~~v~~~~~g~~~~~-~~~~~~~~---~~--~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~ 153 (398)
T cd00613 80 DVANASLQDEATAAAE-AAGLAAIR---AY--HKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALK 153 (398)
T ss_pred CccceeccCchHHHHH-HHHHHHHh---cc--cCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHH
Confidence 7 3445555555555 33333332 11 146899999999999988877766 99999999777889999999
Q ss_pred HHHHhcCCCeEEEEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEEeCCccccccCCCC
Q 001531 722 KAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGG 801 (1058)
Q Consensus 722 ~~i~~~~~~taaV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~~s~hKtf~~P~g~ 801 (1058)
++++ ++|++|++++|+++|.+.+.+++|+++|+++|+++++|+++.... +..+++.+|+|++++++||++ +|+|+
T Consensus 154 ~~i~---~~t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~-~~~~~~~~~~d~~~~s~~K~~-~p~g~ 228 (398)
T cd00613 154 EEVS---EEVAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDGDNLNLT-GLKPPGEYGADIVVGNLQKTG-VPHGG 228 (398)
T ss_pred HhcC---CCeEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEecccccc-CCCChHHcCCCEEEeeccccC-CCCCC
Confidence 9996 789999999999889997335999999999999999999875433 556778899999999999999 99999
Q ss_pred CCCceeEEEEeCCCCCCCCCCCcccCCCC----------C----CCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001531 802 GGPGMGPIGVKKHLAPFLPSHPVVSTGGI----------P----APEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1058)
Q Consensus 802 GGPg~G~i~~~~~l~~~lpg~~vg~~~d~----------g----~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1058)
|||++|++++++++.+.+++...++..+. . ..++++++.++.+ +....+..+++++..++.+|
T Consensus 229 Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~---~~~~~~~~a~~~l~~~~~~g 305 (398)
T cd00613 229 GGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICT---GQALLALMAAMYIVYLGPEG 305 (398)
T ss_pred CCCceeEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhccccccccccee---cHHHHHHHHHHHHHHhCHHH
Confidence 99999999999888877765544332110 0 0012234444433 35556667888888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEE
Q 001531 868 LTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLM 946 (1058)
Q Consensus 868 l~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lr 946 (1058)
+.++.++..++++|+.++|+++ ..... .+++.+.++++++.. .+.+..+++++|.++||+......+..+.+|
T Consensus 306 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~---~~~~~~~v~~~~~~~---~~~~~~~~~~~L~~~gi~~~~~~~~~~~~lR 379 (398)
T cd00613 306 LKEIAERAHLNANYLAKRLKEVGGVLPF---NGPFFHEFVLRLPPL---YGIRAEDLAKALIDGGFHAPTMYLPVDGTLM 379 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccC---CCCeeEEEEEEcCCc---chHHHHHHHHhhhhcCccccccccCCCCeEE
Confidence 9999999999999999999885 22211 234445556665410 0245788999999999987654322358999
Q ss_pred EEcCCCCCHHHHHHHHHHH
Q 001531 947 IEPTESESKEELDRYCDAL 965 (1058)
Q Consensus 947 is~te~~t~eeid~fi~aL 965 (1058)
++|+.++|++|||+++++|
T Consensus 380 is~~~~~t~edid~~~~~L 398 (398)
T cd00613 380 IEPTETETKEELDALLEAL 398 (398)
T ss_pred EEcCCCCCHHHHHHHHHhC
Confidence 9999999999999999875
No 23
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.4e-31 Score=306.28 Aligned_cols=360 Identities=19% Similarity=0.165 Sum_probs=277.1
Q ss_pred HHHHHHHHHHhcCC---cccccccCCCCCCCCChHHHHHHHHhCC-CcccccCCChhHHhhHHHHHHHHHHHHHHHhcCC
Q 001531 151 SQMIEHMQKLASMN---KVYKSFIGMGYYNTHVPPVILRNIMENP-AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL 226 (1058)
Q Consensus 151 ~e~~~~~~~la~~n---~~~~~~lG~g~~~~~~p~~i~~~i~~~~-~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~ 226 (1058)
..+++.+..+.+.- ..|.+.-+.+ ..|..+.+.+.+.- .|+.+.+......++-..+.+.+.++.+|+++|+
T Consensus 6 ~~~r~~fp~l~~~~~~~~vylD~aa~~----~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a 81 (405)
T COG0520 6 AAVRADFPALKREVGKPLVYLDNAATS----QKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNA 81 (405)
T ss_pred HHHHhhCHHHhhccCCCeEEecCcccc----cCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCC
Confidence 34677777776542 3344433333 37777765555321 1233334445557777788999999999999999
Q ss_pred CC-cceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch--------hhhc-cCC
Q 001531 227 PM-SNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--------DIDY-KSG 296 (1058)
Q Consensus 227 ~~-anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~--------~l~~-l~~ 296 (1058)
+. .++.++.++|.++..+..++.....+||+||++..+|++++.+|+.+++..|+++++++++ +++. +++
T Consensus 82 ~~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~ 161 (405)
T COG0520 82 DSSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLITP 161 (405)
T ss_pred CCCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCC
Confidence 95 8899999999887777666531113789999999999999999999998889999998853 3455 788
Q ss_pred CEeEEEEEc-CCCceeeccHHHHHHHHHhcCcEEEEEeccccccCCC-CCCcccceEEEecC-cccccccCCCCCceEEE
Q 001531 297 DVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFL 373 (1058)
Q Consensus 297 ~t~~V~v~~-pn~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~-~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l 373 (1058)
+|++|.+++ +|.+|.+.|+++|+++||++|++++||+ .++.+.++ +..++|+|++++|+ |+|++|. |.|+|
T Consensus 162 ~Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDa-aq~~~h~~idv~~l~~Df~afsgHKwl~gP~-----GiGvL 235 (405)
T COG0520 162 KTKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDA-AQAAGHLPIDVQELGCDFLAFSGHKWLLGPT-----GIGVL 235 (405)
T ss_pred CceEEEEECccccccccchHHHHHHHHHHcCCEEEEEC-ccccCccCCCchhcCCCEEEEcccccccCCC-----ceEEE
Confidence 999999987 6899999999999999999999999943 34565443 56899999999999 5575542 68999
Q ss_pred EEehhhhhcCCCcEEeee-ecCCCC-cceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHH
Q 001531 374 ATSQEYKRMMPGRIVGVS-IDSSGK-PALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVH 451 (1058)
Q Consensus 374 ~~~~~~~~~lpgrivG~s-~d~~g~-~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~ 451 (1058)
|+|+++++.|+|...|.. .+.... ..+ ...+...|.|.||+|| ...+++.+|+ .++...|+++|.++.+
T Consensus 236 y~r~~~l~~l~P~~~gg~~~~~~~~~~~~----~~~~~p~rfe~gTpn~---~~~i~l~aAl--~~~~~ig~~~i~~~e~ 306 (405)
T COG0520 236 YVRKELLEELEPFLGGGGMIEYVSRDEGV----TLAELPLRFEAGTPNI---AGAIGLAAAL--DYLLEIGMEAIEAHER 306 (405)
T ss_pred EEchHHHhhcCCcccCCCceeeecccccc----cccCcchhhccCCchH---HHHHhHHHHH--HHHHHHhHHHHHHHHH
Confidence 999999999988887742 111011 111 1234567789999999 4666777776 7777888999999999
Q ss_pred HHHHHHHHHHhcCCCeEEcCCC---CccEEEEecCC--HHHHHHHHHHcCceeeecc------------CCeEEEEeccC
Q 001531 452 GLAGTFALGLKKLGTVEVQGLP---FFDTVKVKCAD--AHAIASAAYKIEMNLRVVD------------SNTVTASFDET 514 (1058)
Q Consensus 452 ~~a~~l~~~L~~~G~~~l~~~~---~~~~v~i~~~~--~~~l~~~L~~~GI~~~~~~------------~~~lris~~~~ 514 (1058)
++++|+.+.|+++.++++++.+ ....++|.+++ +.++++.|.++||.++.-. .+.+|+|++.|
T Consensus 307 ~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~Y 386 (405)
T COG0520 307 ELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLY 386 (405)
T ss_pred HHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCCCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeec
Confidence 9999999999999669998643 45678888887 8999999999999876421 24599999999
Q ss_pred CCHHHHHHHHHHHhC
Q 001531 515 TTLEDVDKLFIVFAG 529 (1058)
Q Consensus 515 ~t~edid~ll~al~~ 529 (1058)
||+||||+|+++|+.
T Consensus 387 Nt~edid~l~~aL~~ 401 (405)
T COG0520 387 NTEEDVDRLLEALKK 401 (405)
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999999999964
No 24
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.95 E-value=9.1e-26 Score=265.06 Aligned_cols=360 Identities=16% Similarity=0.092 Sum_probs=255.8
Q ss_pred HHHHHHHHHHhcC----CcccccccCCCCCCCCChHHHHHHHHhCC-CcccccCCChhHHhhHHHHHHHHHHHHHHHhcC
Q 001531 151 SQMIEHMQKLASM----NKVYKSFIGMGYYNTHVPPVILRNIMENP-AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTG 225 (1058)
Q Consensus 151 ~e~~~~~~~la~~----n~~~~~~lG~g~~~~~~p~~i~~~i~~~~-~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G 225 (1058)
..++.++.-+... ...|.++-+.+. .|..+.+.+...- .++....+.....++-..+.+.++++.+|+++|
T Consensus 6 ~~~r~~fp~~~~~~~~~~~iYld~a~~~~----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~ 81 (406)
T PRK09295 6 EKVRADFPVLSREVNGLPLAYLDSAASAQ----KPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFIN 81 (406)
T ss_pred HHHHhhCccccCcCCCCceEEEeCccccc----CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcC
Confidence 3456666655321 235777777774 4444433332200 111111111112344566778889999999999
Q ss_pred C-CCcceEeecchHHHHHHHHHHhc--cccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-
Q 001531 226 L-PMSNASLLDEGTAAAEAMAMCNN--IQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY- 293 (1058)
Q Consensus 226 ~-~~anasl~~~~Taa~ea~~~a~~--~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~--------~~l~~- 293 (1058)
. ++.++.+..|+|.++..++.++. .. ++||+||++..+|+++...++.+++..|++++.++. +++++
T Consensus 82 ~~~~~~v~~t~g~t~~l~~~~~~~~~~~~-~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~ 160 (406)
T PRK09295 82 ARSAEELVFVRGTTEGINLVANSWGNSNV-RAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPAL 160 (406)
T ss_pred cCCCCeEEEeCCHHHHHHHHHHHhhhhcC-CCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHh
Confidence 8 56688888999988777665542 11 378999999999999998888777778999888754 35555
Q ss_pred cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCC-CCCcccceEEEecCcccccccCCCCCceE
Q 001531 294 KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAA 371 (1058)
Q Consensus 294 l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~-~p~~~GaDivvgs~k~lg~P~~~GGP~~G 371 (1058)
++++|++|++++| |.+|.+.|+++|+++||++|++++||+ .+++|... +..++|+|++++|++++.+| +|.|
T Consensus 161 i~~~t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~-a~~~g~~~~~~~~~~~D~~~~s~~K~~gp-----~G~G 234 (406)
T PRK09295 161 FDERTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDG-AQAVMHHPVDVQALDCDFYVFSGHKLYGP-----TGIG 234 (406)
T ss_pred cCCCcEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEc-ccccCccccCchhcCCCEEEeehhhccCC-----CCcE
Confidence 7788999999987 789999999999999999999999943 44666443 34578999999999446434 4579
Q ss_pred EEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHH
Q 001531 372 FLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVH 451 (1058)
Q Consensus 372 ~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~ 451 (1058)
++++++++.+.+|+...|.+.......... ...++...|++.||.|+ .++.++.+++ .++...|++++.+++.
T Consensus 235 ~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~r~e~GT~~~---~~~~~l~~al--~~~~~~g~~~i~~~~~ 307 (406)
T PRK09295 235 ILYVKEALLQEMPPWEGGGSMIATVSLTEG--TTWAKAPWRFEAGTPNT---GGIIGLGAAL--DYVSALGLNNIAEYEQ 307 (406)
T ss_pred EEEEchHhHhhCCCcccCCceeeeeecCCc--cccCCchhhcCCCCccH---HHHHHHHHHH--HHHHHhCHHHHHHHHH
Confidence 999999998889876655432100000000 11123345778999998 4666777776 5666679999999999
Q ss_pred HHHHHHHHHHhcCCCeEEcCC-CCccEEEEecCC--HHHHHHHHHHcCceeeec------------cCCeEEEEeccCCC
Q 001531 452 GLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCAD--AHAIASAAYKIEMNLRVV------------DSNTVTASFDETTT 516 (1058)
Q Consensus 452 ~~a~~l~~~L~~~G~~~l~~~-~~~~~v~i~~~~--~~~l~~~L~~~GI~~~~~------------~~~~lris~~~~~t 516 (1058)
+++++++++|+++++++++++ .....++|..++ +.++.+.|.++||.++.- .++.+|+|++.+||
T Consensus 308 ~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt 387 (406)
T PRK09295 308 NLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNT 387 (406)
T ss_pred HHHHHHHHHHhcCCCEEEeCCCCCceEEEEEECCcCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCC
Confidence 999999999999855888753 223457777765 788999999999988531 13579999999999
Q ss_pred HHHHHHHHHHHh
Q 001531 517 LEDVDKLFIVFA 528 (1058)
Q Consensus 517 ~edid~ll~al~ 528 (1058)
++|||+|+++|.
T Consensus 388 ~~did~l~~~l~ 399 (406)
T PRK09295 388 HEEVDRLVAGLQ 399 (406)
T ss_pred HHHHHHHHHHHH
Confidence 999999999995
No 25
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.95 E-value=1.8e-25 Score=259.03 Aligned_cols=359 Identities=18% Similarity=0.243 Sum_probs=243.2
Q ss_pred CCCHHHHHHHHHHHhcCccCcCcccccccc-cccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHh
Q 001531 567 YHTEHELLRYIHLLQSKELSLCHSMIPLGS-CTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTIT 645 (1058)
Q Consensus 567 ~~sE~e~~r~~~~l~~~~~~~~~~~i~lGs-~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~ 645 (1058)
++||+|++++|++++++|+++.+ | ||+ ||+..+...+... ++..-++..+ ...+|..+++.++++++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~a~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~ 72 (371)
T PRK13520 1 GLSEEEILEELEEYRSEDLKYER--I-LSSMCTEPHPIARKAHE----MFLETNLGDP-GLFPGTAKLEEEAVEMLGELL 72 (371)
T ss_pred CCCHHHHHHHHHHHHhcCCCHHH--e-eeeeecCchHHHHHHHH----HHHhcCCCCc-ccCccHHHHHHHHHHHHHHHh
Confidence 37999999999999999999874 4 887 7765554343331 1211111112 123567788889999999999
Q ss_pred CCCce-eeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCCCCCHHHHHHHH
Q 001531 646 GFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAA 724 (1058)
Q Consensus 646 G~~~~-~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g~iD~e~L~~~i 724 (1058)
|++.. .+..++|+.++. .+++.++. .+.+++++|++++..|.+....++..|++++.+|.++++.+|+++|++++
T Consensus 73 g~~~~~~~~~~ggt~a~~---~a~~~~~~-~~~~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i 148 (371)
T PRK13520 73 HLPDAYGYITSGGTEANI---QAVRAARN-LAKAEKPNIVVPESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLI 148 (371)
T ss_pred CCCCCCeEEecCcHHHHH---HHHHHHHh-hccCCCceEEecCcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHH
Confidence 98753 345556665543 33433322 11124578999988887777777889999999999888999999999999
Q ss_pred HhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCC--C----CccCCcEEEeCCcccccc
Q 001531 725 EANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS--P----GYIGADVCHLNLHKTFCI 797 (1058)
Q Consensus 725 ~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~--p----g~~GaDi~~~s~hKtf~~ 797 (1058)
+ +++++|++.++ |.+|.+. |+++|+++||++|++++||+++.....++.. + ...|+|.+.++.||+...
T Consensus 149 ~---~~~~~vi~~~~~~~tG~~~-~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a 224 (371)
T PRK13520 149 D---DNTIGIVGIAGTTELGQVD-PIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLA 224 (371)
T ss_pred h---hCCEEEEEEcCCcCCcccC-CHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCc
Confidence 7 67877777776 4689998 7999999999999999999987422211111 1 135889999999997532
Q ss_pred CCCCCCCceeEEEE-eCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHH
Q 001531 798 PHGGGGPGMGPIGV-KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI 876 (1058)
Q Consensus 798 P~g~GGPg~G~i~~-~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~ 876 (1058)
|.+.|++++ ++++.+.+.... .... + ........ + +.+ ..++.+++.+..++.+|+++..++..
T Consensus 225 -----~~~~G~~~~~~~~~~~~l~~~~-~~~~--~--~~~~~~~g--t-~~~--~~~~~~~~al~~l~~~g~~~~~~~~~ 289 (371)
T PRK13520 225 -----PIPAGGILFRDESYLDALAVDT-PYLT--S--KKQATLTG--T-RSG--AGVAATYAVMKYLGREGYRKVVERCM 289 (371)
T ss_pred -----cCCceEEEEcCHHHHHhhcccC-cccc--C--CCCcceEe--e-ccC--hHHHHHHHHHhhhcHhHHHHHHHHHH
Confidence 223444554 444444432100 0000 0 00000001 1 111 22445677788888999998899999
Q ss_pred HHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCH
Q 001531 877 LNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESK 955 (1058)
Q Consensus 877 ~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~ 955 (1058)
.+++++.++|++. +++.+ . +..+.+.++++ +..++.++|.++||.+..... ++.+||+++..+|+
T Consensus 290 ~~~~~l~~~L~~~g~~~~~-~---~~~~~v~~~~~--------~~~~v~~~L~~~gi~v~~~~~--~~~iRis~~~~~t~ 355 (371)
T PRK13520 290 ENTRWLAEELKERGFEPVI-E---PVLNIVAFDDP--------NPDEVREKLRERGWRVSVTRC--PEALRIVCMPHVTR 355 (371)
T ss_pred HHHHHHHHHHHhCCCEEec-C---CCceEEEEecC--------CHHHHHHHHHHCCceeccCCC--CCEEEEEEECCCCH
Confidence 9999999999875 44332 1 22333455542 468999999999998765432 46899999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 001531 956 EELDRYCDALISIRE 970 (1058)
Q Consensus 956 eeid~fi~aL~~i~~ 970 (1058)
+|||+|+++|++++.
T Consensus 356 edi~~~~~~l~~~~~ 370 (371)
T PRK13520 356 EHIENFLEDLKEVKK 370 (371)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999988653
No 26
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.94 E-value=1.1e-24 Score=255.33 Aligned_cols=362 Identities=16% Similarity=0.091 Sum_probs=255.4
Q ss_pred CCHHHHHHHHHHHhcCCcccccccCCCCCCCCChHHHHHHHHhCC-CcccccCCChhHHhhHHHHHHHHHHHHHHHhcCC
Q 001531 148 LTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENP-AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL 226 (1058)
Q Consensus 148 ~sE~e~~~~~~~la~~n~~~~~~lG~g~~~~~~p~~i~~~i~~~~-~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~ 226 (1058)
++-.++++++..+. .+..|.+.-+.|. .|..+.+.+...- .|+...+.......+...+.+.++++.+|+++|.
T Consensus 4 ~~~~~~r~~fp~l~-~~~~yld~a~~~~----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~ 78 (401)
T PRK10874 4 FNPAQFRAQFPALQ-DAGVYLDSAATAL----KPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNA 78 (401)
T ss_pred CCHHHHHHhCCCcC-CceEEEeCCcccC----CCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCC
Confidence 34455667776552 3456767666664 4434332222100 1221111112223455677788999999999999
Q ss_pred -CCcceEeecchHHHHHHHHHHhcc-ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cC
Q 001531 227 -PMSNASLLDEGTAAAEAMAMCNNI-QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS 295 (1058)
Q Consensus 227 -~~anasl~~~~Taa~ea~~~a~~~-~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~--------~~l~~-l~ 295 (1058)
++.++.+.+|+|.++..++.++.. ..++||+||+++..|++.+..|+.+++..|++++.++. +++++ ++
T Consensus 79 ~~~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~ 158 (401)
T PRK10874 79 PDAKNIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELIT 158 (401)
T ss_pred CCCCEEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcC
Confidence 677888899999888887766521 01378999999999999988888777778999988764 34555 77
Q ss_pred CCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCC-CCCcccceEEEecCcccccccCCCCCceEEE
Q 001531 296 GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAAFL 373 (1058)
Q Consensus 296 ~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~-~p~~~GaDivvgs~k~lg~P~~~GGP~~G~l 373 (1058)
++|++|++.+| |.+|.+.|+++|+++||++|++++||+ ..++|.+. +..++|+|++++|++++.+| ||+|++
T Consensus 159 ~~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~-a~~~g~~~~~~~~~~~d~~~~s~~K~~gp-----~G~G~l 232 (401)
T PRK10874 159 PRTRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDG-AQGAVHFPADVQALDIDFYAFSGHKLYGP-----TGIGVL 232 (401)
T ss_pred cCcEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEC-CcccccccCCchhcCCCEEEEecccccCC-----CccEEE
Confidence 89999999987 689999999999999999999999943 44555332 34578999999998335333 457999
Q ss_pred EEehhhhhcCCCcEEeeee-cCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHH
Q 001531 374 ATSQEYKRMMPGRIVGVSI-DSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHG 452 (1058)
Q Consensus 374 ~~~~~~~~~lpgrivG~s~-d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~ 452 (1058)
++++++.+.+++...|.+. +. ..+. .+..++.+.|.+.||.|+ ....++.+++ .++...|+.++.+++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~e~Gt~~~---~~~~al~~al--~~l~~~g~~~~~~~~~~ 303 (401)
T PRK10874 233 YGKSELLEAMSPWQGGGKMLTE---VSFD-GFTPQSAPWRFEAGTPNV---AGVIGLSAAL--EWLADIDINQAESWSRS 303 (401)
T ss_pred EEchHHHhcCCCeecCCcceEe---eccC-ccCCCCChhhccCCCcCH---HHHHHHHHHH--HHHHHhCHHHHHHHHHH
Confidence 9999999888765433210 00 0010 111223345677899998 5566667776 55667788899999999
Q ss_pred HHHHHHHHHhcCCCeEEcCCCCccEEEEecCC--HHHHHHHHHHcCceeeecc------------CCeEEEEeccCCCHH
Q 001531 453 LAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVVD------------SNTVTASFDETTTLE 518 (1058)
Q Consensus 453 ~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~--~~~l~~~L~~~GI~~~~~~------------~~~lris~~~~~t~e 518 (1058)
++++++++|+++.|++++..+....+.|.+++ ..++.+.|.++||.++... .+.+|+|++.+||++
T Consensus 304 l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~e 383 (401)
T PRK10874 304 LATLAEDALAKLPGFRSFRCQDSSLLAFDFAGVHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQS 383 (401)
T ss_pred HHHHHHHHHhcCCCEEEeCCCCCcEEEEEECCcCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHH
Confidence 99999999999833887743322345556655 7889999999999875421 478999999999999
Q ss_pred HHHHHHHHHhC
Q 001531 519 DVDKLFIVFAG 529 (1058)
Q Consensus 519 did~ll~al~~ 529 (1058)
|+++++++|..
T Consensus 384 did~ll~al~~ 394 (401)
T PRK10874 384 DVDALVNAVDR 394 (401)
T ss_pred HHHHHHHHHHH
Confidence 99999999963
No 27
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=8.2e-25 Score=254.04 Aligned_cols=315 Identities=20% Similarity=0.237 Sum_probs=227.5
Q ss_pred hhcHHHHHHHHHHHHHHHhCCCc-eeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHH----HHhCC
Q 001531 627 AQGYQEMFNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCG 701 (1058)
Q Consensus 627 ~qG~~~~~~el~~~lael~G~~~-~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~----a~~~G 701 (1058)
++-..+.+++.++.+++++|.+. ..+..+.|++ + ++.+..+.|... ..++|+||++...|.+|... ++..|
T Consensus 61 ~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT-~-aln~va~~l~~~--~~~gdeIv~s~~EH~sn~~pw~~~~~~~G 136 (405)
T COG0520 61 AEEATDLYEAAREAVARFLNADSSDEIVFTRGTT-E-ALNLVARGLGRS--LKPGDEIVVSDLEHHSNIVPWQELAKRTG 136 (405)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChh-H-HHHHHHHHhhhh--hcCCCEEEEccCcchhhHHHHHHHHHhcC
Confidence 34455678899999999999984 4444444433 1 344444544311 13568999999999887654 45679
Q ss_pred cEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCC
Q 001531 702 MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 780 (1058)
Q Consensus 702 ~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg 780 (1058)
++++++|.+++|.+|+++++++++ ++|++|.+++- |.+|.+. |+++|+++||++|++++||++|..+... ....
T Consensus 137 a~v~~i~~~~~g~~~~~~~~~~i~---~~Tklvais~vSn~tG~~~-pv~~I~~la~~~ga~v~VDaaq~~~h~~-idv~ 211 (405)
T COG0520 137 AKVRVIPLDDDGLLDLDALEKLIT---PKTKLVALSHVSNVTGTVN-PVKEIAELAHEHGALVLVDAAQAAGHLP-IDVQ 211 (405)
T ss_pred cEEEEEecCCCCCcCHHHHHHhcC---CCceEEEEECccccccccc-hHHHHHHHHHHcCCEEEEECccccCccC-CCch
Confidence 999999999889999999999887 89999999996 5799999 7999999999999999999998644432 2346
Q ss_pred ccCCcEEEeCCccccccCCCCCCC-ceeEEEEeCCCCCCCCCCCcccC-C---CC--------CCCCCCCCCCCCCccch
Q 001531 781 YIGADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVST-G---GI--------PAPEKSQPLGTIAAAPW 847 (1058)
Q Consensus 781 ~~GaDi~~~s~hKtf~~P~g~GGP-g~G~i~~~~~l~~~lpg~~vg~~-~---d~--------g~~~~~~~t~~i~sa~~ 847 (1058)
++|+|++++|.|||| +|| |+|++++++++.+.++....|.. . +. ..++.+.+|.++..
T Consensus 212 ~l~~Df~afsgHKwl------~gP~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~--- 282 (405)
T COG0520 212 ELGCDFLAFSGHKWL------LGPTGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAG--- 282 (405)
T ss_pred hcCCCEEEEcccccc------cCCCceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHH---
Confidence 789999999999998 467 89999999988887744333321 1 10 01123445555543
Q ss_pred hhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCC-ccceEEEEecccccccCCCCHHHHHHH
Q 001531 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNG-TVAHEFIVDLRGLKNTAGIEPEDVAKR 926 (1058)
Q Consensus 848 g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~-~~~~e~vv~~~~~~~~~g~~~~~v~k~ 926 (1058)
...+..|..|+. +.|+.++.++....++|+.++|+++..+..-|+.. .....+.|.+. ++...++++.
T Consensus 283 --~i~l~aAl~~~~---~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~------~~~~~dv~~~ 351 (405)
T COG0520 283 --AIGLAAALDYLL---EIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVK------GIHPHDVATL 351 (405)
T ss_pred --HHhHHHHHHHHH---HHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeC------CCCHHHHHHH
Confidence 112233444444 45577788888899999999999875453334322 12223445553 6789999999
Q ss_pred HHHCCccccCCCC---C------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001531 927 LMDYGFHGPTMSW---P------VPGTLMIEPTESESKEELDRYCDALISIRE 970 (1058)
Q Consensus 927 L~~~Gi~~~~~~~---p------~~~~Lris~te~~t~eeid~fi~aL~~i~~ 970 (1058)
|.++||.+....+ | +..++|+|+..++|++|||+|+++|+++.+
T Consensus 352 L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 352 LDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred HHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 9999987654321 2 346699999999999999999999998753
No 28
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.94 E-value=9.4e-25 Score=255.77 Aligned_cols=356 Identities=17% Similarity=0.111 Sum_probs=251.3
Q ss_pred HHHHHHHHHhcCCcccccccCCCCCCCCChHHHHHHHHh---CCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCC-
Q 001531 152 QMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIME---NPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP- 227 (1058)
Q Consensus 152 e~~~~~~~la~~n~~~~~~lG~g~~~~~~p~~i~~~i~~---~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~- 227 (1058)
++++++..+. .+..|.+.-+.|. .|..+.+.+.+ ....-..+.+|. ..+-..+.+.++++.+|+++|.+
T Consensus 5 ~~r~~fp~l~-~~~iyld~a~~~~----~p~~v~~a~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~r~~la~~~g~~~ 77 (398)
T TIGR03392 5 QFRQQFPALQ-DGTVYLDSAATAL----KPQAVIDATQQFYRLSSGTVHRSQHQ--QAQSLTARYELARQQVARFLNAPD 77 (398)
T ss_pred HHHHhCCccC-CCeEEeeCccccC----CCHHHHHHHHHHHHhcCCCCCCcccH--HHHHHHHHHHHHHHHHHHHhCCCC
Confidence 4555555442 3456777666664 44444433322 111111122332 23344567888999999999995
Q ss_pred CcceEeecchHHHHHHHHHHhccc-cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cCCC
Q 001531 228 MSNASLLDEGTAAAEAMAMCNNIQ-KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGD 297 (1058)
Q Consensus 228 ~anasl~~~~Taa~ea~~~a~~~~-~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~--------~~l~~-l~~~ 297 (1058)
+.++.+..|+|.++..++.++... .++||+||+++..|++....+...++..|++++.++. +++++ ++++
T Consensus 78 ~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~ 157 (398)
T TIGR03392 78 AENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTPR 157 (398)
T ss_pred CCeEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhccC
Confidence 568888999998888777665210 1378999999999999888887767788999988764 34555 6788
Q ss_pred EeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCC-CCCcccceEEEecCcccccccCCCCCceEEEEE
Q 001531 298 VCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAAFLAT 375 (1058)
Q Consensus 298 t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~-~p~~~GaDivvgs~k~lg~P~~~GGP~~G~l~~ 375 (1058)
|++|++.+| |.+|.+.|+++|+++||++|++++||+ ..+++... +..++++|++++|++++.+| +|+|++++
T Consensus 158 t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~-a~~~~~~~~~~~~~~~d~~~~s~~K~~gp-----~G~G~l~~ 231 (398)
T TIGR03392 158 TRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDG-AQGVVHGPPDVQALDIDFYAFSGHKLYGP-----TGIGVLYG 231 (398)
T ss_pred ceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEh-hhhcCCCCCChhhcCCCEEEEecccccCC-----CceEEEEE
Confidence 999999987 689999999999999999999999943 44554332 33568999999999445334 45899999
Q ss_pred ehhhhhcCCCcEEeeee-cCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Q 001531 376 SQEYKRMMPGRIVGVSI-DSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLA 454 (1058)
Q Consensus 376 ~~~~~~~lpgrivG~s~-d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a 454 (1058)
++++.+.+++...|... +... + .....++.+.|.+.||.|+ ....++.+++ .++...|++++.+++.+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~e~GT~~~---~~~~a~~~al--~~l~~~g~~~i~~~~~~l~ 302 (398)
T TIGR03392 232 KTELLEAMPPWQGGGKMLSHVS---F-DGFIPQAVPHRFEAGTPNI---AGVIGLSAAL--EWLTDIDIAAAEAWSVSLA 302 (398)
T ss_pred cHHHHhhCCCeecCCceEeecc---c-cccccCCChhhccCCCCCH---HHHHHHHHHH--HHHHHhCHHHHHHHHHHHH
Confidence 99998888765433211 1000 0 0111233445678899998 5566677776 5556678999999999999
Q ss_pred HHHHHHHhcCCCeEEcCCCCccEEEEecCC--HHHHHHHHHHcCceeeecc------------CCeEEEEeccCCCHHHH
Q 001531 455 GTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVVD------------SNTVTASFDETTTLEDV 520 (1058)
Q Consensus 455 ~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~--~~~l~~~L~~~GI~~~~~~------------~~~lris~~~~~t~edi 520 (1058)
+++++.|+++.|+++...+....+++.+++ ..++.+.|.++||.++... ++.||+|++.+||++|+
T Consensus 303 ~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei 382 (398)
T TIGR03392 303 DLAEERLAQLPGFRSFRCPGSSLLAFDFAGVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDV 382 (398)
T ss_pred HHHHHHHhcCCCeEEeCCCCCcEEEEEeCCcCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHH
Confidence 999999999844887743333356666655 7889999999999886321 46899999999999999
Q ss_pred HHHHHHHhC
Q 001531 521 DKLFIVFAG 529 (1058)
Q Consensus 521 d~ll~al~~ 529 (1058)
++++++|..
T Consensus 383 ~~l~~~l~~ 391 (398)
T TIGR03392 383 DALVDAVGA 391 (398)
T ss_pred HHHHHHHHH
Confidence 999999963
No 29
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.94 E-value=1.1e-24 Score=257.25 Aligned_cols=309 Identities=17% Similarity=0.125 Sum_probs=233.5
Q ss_pred hHHHHHHHHHHHHHHHhcCCC-CcceEeecchHHHHHHHHHHhcc-ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 001531 207 QGRLESLLNFQTMIADLTGLP-MSNASLLDEGTAAAEAMAMCNNI-QKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1058)
Q Consensus 207 qG~l~~l~e~q~~ia~L~G~~-~anasl~~~~Taa~ea~~~a~~~-~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~ 284 (1058)
.-..+.+.++++.+|+++|.+ +.++.+..|+|.++..++.++.. ..++|++|+++..+|+++...++.+++..|++++
T Consensus 72 ~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~ 151 (424)
T PLN02855 72 AKATDAYELARKKVAAFINASTSREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLK 151 (424)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEE
Confidence 334466788899999999996 46888899999887776654311 0137899999999999999998887778899988
Q ss_pred EeCc--------hhhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCC-CCCcccceEEE
Q 001531 285 VSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVV 353 (1058)
Q Consensus 285 ~v~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~-~p~~~GaDivv 353 (1058)
.++. +++++ +++++++|+++++ |.+|.+.|+++|+++||++|++++||+ .++.|... +..++|+|+++
T Consensus 152 ~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~-a~~~g~~~~~~~~~~~d~~~ 230 (424)
T PLN02855 152 FVGLTPDEVLDVEQLKELLSEKTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDA-CQSVPHMPVDVQTLGADFLV 230 (424)
T ss_pred EEecCCCCCcCHHHHHHHhccCceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEh-hhhcCCcCCCchhcCCCEEE
Confidence 8764 34555 7788999999987 689999999999999999999999943 34555432 34678999999
Q ss_pred ecCcccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHH
Q 001531 354 GSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1058)
Q Consensus 354 gs~k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~ 433 (1058)
++++++.+| +|.|++++++++++++++.+.|++.... . |......++.+.|++.||+|+ ...+++.+++
T Consensus 231 ~s~~K~~gp-----~G~G~l~~~~~~~~~~~p~~~g~~~~~~--~-~~~~~~~~~~~~r~e~GT~~~---~~~~~l~~al 299 (424)
T PLN02855 231 ASSHKMCGP-----TGIGFLWGKSDLLESMPPFLGGGEMISD--V-FLDHSTYAPPPSRFEAGTPAI---GEAIGLGAAI 299 (424)
T ss_pred eecccccCC-----CccEEEEEchhhhhcCCCEecCCCceee--e-ecCccccCCChhhccCCChHH---HHHHHHHHHH
Confidence 999556433 4689999999999999887766432100 0 100000123345678899998 4555666665
Q ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCC------CccEEEEecCC--HHHHHHHHHHc-Cceeeec--
Q 001531 434 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP------FFDTVKVKCAD--AHAIASAAYKI-EMNLRVV-- 502 (1058)
Q Consensus 434 yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~------~~~~v~i~~~~--~~~l~~~L~~~-GI~~~~~-- 502 (1058)
.++...|++++.+++.+++++++++|+++.|++++++. ....++|.+++ +.++.+.|.++ ||.++.-
T Consensus 300 --~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~~~~~v~~~L~~~~gI~v~~g~~ 377 (424)
T PLN02855 300 --DYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGIHPTDLSTFLDQQHGVAIRSGHH 377 (424)
T ss_pred --HHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCcCHHHHHHHhcccCCEEEechhh
Confidence 56666799999999999999999999998449988431 22456777765 78899999887 9987631
Q ss_pred ----------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 503 ----------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 503 ----------~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
.++.+|+|++.+||++|+++|+++|..
T Consensus 378 c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~ 414 (424)
T PLN02855 378 CAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKD 414 (424)
T ss_pred hhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHH
Confidence 136799999999999999999999963
No 30
>PLN03032 serine decarboxylase; Provisional
Probab=99.94 E-value=2.4e-24 Score=247.47 Aligned_cols=297 Identities=16% Similarity=0.204 Sum_probs=213.1
Q ss_pred hcHHHHHHHHHHHHHHHhCCCcee---eecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEE
Q 001531 628 QGYQEMFNNLGEWLCTITGFDSFS---LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1058)
Q Consensus 628 qG~~~~~~el~~~lael~G~~~~~---l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~v 704 (1058)
....+++.++.+++++++|++... +++++|+.++ ++++..++.. .++.+|+++..+|.+..+.+.++|+++
T Consensus 62 ~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaN---l~al~~ar~~---~~~~~vi~s~~~H~Sv~kaa~~lg~~~ 135 (374)
T PLN03032 62 VHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGN---LHGILVGREV---FPDGILYASRESHYSVFKAARMYRMEA 135 (374)
T ss_pred ccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHH---HHHHHHHHHh---CCCcEEEeCCCceeHHHHHHHHcCCCC
Confidence 367899999999999999998532 5555666555 4554443321 123478999999999999999999999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcC-----CEEEEeccCcccccCcC-
Q 001531 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNG-----GQVYMDGANMNAQVGLT- 777 (1058)
Q Consensus 705 v~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g-----~lv~vD~a~~~al~gl~- 777 (1058)
+.||+|++|++|+++|+++|++...++.+|+++..| .+|.++ ||++|+++|+++| +++|||+|+..+...+.
T Consensus 136 ~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~id-pi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~ 214 (374)
T PLN03032 136 VKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVD-DLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVS 214 (374)
T ss_pred eEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCC-CHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccC
Confidence 999999999999999999998433368888888875 589999 7999999999997 48999998643322221
Q ss_pred -C---CCccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHH
Q 001531 778 -S---PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (1058)
Q Consensus 778 -~---pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~ 853 (1058)
. ....++|.+++|.||+++.|+ |.|++.+++.+...+.... ++.. ... ..+..+. ++..+
T Consensus 215 ~~~~~~~~~~vDSis~s~HK~~g~P~-----g~G~ll~r~~~~~~~~~~~-----~Yl~--~~d--~ti~gSR--~g~~~ 278 (374)
T PLN03032 215 RAPEVTFRKPIGSVSVSGHKFLGCPM-----PCGVALTRKKHVKALSQNV-----EYLN--SRD--ATIMGSR--NGHAP 278 (374)
T ss_pred CCcccCCCcCCcEEEECcccccCCCc-----CeEEEEEEchhhHhhccCC-----cccC--CCC--CcccCCC--chHHH
Confidence 1 123479999999999875553 5679999976654432110 0000 000 1121111 12445
Q ss_pred HHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCc
Q 001531 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 932 (1058)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi 932 (1058)
+..|+.|..+|.+|+++..++++++|+|+.++|++. +++.. + |....++|..+ ..+. ..+||
T Consensus 279 l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~-~---p~~~~V~f~~~--------~~~~-----~~~~w 341 (374)
T PLN03032 279 LYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRL-N---ELSSTVVFERP--------MDEA-----FIKKW 341 (374)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEE-C---CCceEEEEcCC--------CcHh-----Hhhee
Confidence 678999999999999999999999999999999885 55543 2 33333444422 1111 23689
Q ss_pred cccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001531 933 HGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 968 (1058)
Q Consensus 933 ~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i 968 (1058)
++.+. .+.++|++++..+++.+|+|+++|+++
T Consensus 342 ~l~~~----~~~~hi~vm~~~~~~~id~fi~dl~~~ 373 (374)
T PLN03032 342 QLACE----GDIAHVVVMPNVTVEKLDEFVEELVEV 373 (374)
T ss_pred eeccc----CCEEEEEECCCCCHHHHHHHHHHHhcc
Confidence 88754 368999999999999999999999764
No 31
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.94 E-value=1.2e-24 Score=244.08 Aligned_cols=310 Identities=18% Similarity=0.230 Sum_probs=224.4
Q ss_pred HHHHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHH-HHHHcCCCCCCEEEEcCCCCCccHHHHHh---CCcEEE
Q 001531 630 YQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRA-YHKARGDHHRNVCIIPVSAHGTNPATAAM---CGMKIV 705 (1058)
Q Consensus 630 ~~~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~-y~~~~G~~~r~~Vlip~saHg~~pa~a~~---~G~~vv 705 (1058)
..+++++.++.+++++|.+...+..+||++ ++..++++. +...+...+++.|+++...|...-..++. .|++|.
T Consensus 42 A~~~ve~AR~~iA~llga~~~eIiFTSG~T--EsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vt 119 (386)
T COG1104 42 ARKAVEEAREQIAKLLGADPEEIIFTSGAT--ESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVT 119 (386)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEecCCc--HHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEE
Confidence 567899999999999999986555555543 245555553 11111123567899988877544444443 599999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCC
Q 001531 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA 784 (1058)
Q Consensus 706 ~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~Ga 784 (1058)
++|+|.+|.+|+++|+++|+ ++|.+|.|.+.| .+|+++ ||++|+++|+++|+++|+|++|..+-..+ .+.++++
T Consensus 120 yl~V~~~G~v~~e~L~~al~---~~T~LVSim~aNnE~G~IQ-pI~ei~~i~k~~~i~fHvDAvQa~Gkipi-~~~~~~v 194 (386)
T COG1104 120 YLPVDSNGLVDLEQLEEALR---PDTILVSIMHANNETGTIQ-PIAEIGEICKERGILFHVDAVQAVGKIPI-DLEELGV 194 (386)
T ss_pred EeCCCCCCeEcHHHHHHhcC---CCceEEEEEecccCeeecc-cHHHHHHHHHHcCCeEEEehhhhcCceec-cccccCc
Confidence 99999999999999999997 899999998875 799999 79999999999999999999986433322 3456799
Q ss_pred cEEEeCCccccccCCCCCCC-ceeEEEEeCC--CCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHH
Q 001531 785 DVCHLNLHKTFCIPHGGGGP-GMGPIGVKKH--LAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 861 (1058)
Q Consensus 785 Di~~~s~hKtf~~P~g~GGP-g~G~i~~~~~--l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~ 861 (1058)
|++.+|.||. +|| |+|++++++. +.+.+.|. | ++++++.+|.|+.+ ..+...+ .
T Consensus 195 D~ls~SaHK~-------~GpkGiGaLyv~~~~~~~p~i~GG--g-----QE~g~RsGTenv~~----Ivg~~~A-----~ 251 (386)
T COG1104 195 DLLSFSAHKF-------GGPKGIGALYVRPGVRLEPLIHGG--G-----QERGLRSGTENVPG----IVGFGKA-----A 251 (386)
T ss_pred ceEEeehhhc-------cCCCceEEEEECCCCccCceeccC--c-----CCCCCCCCCccHHH----HHHHHHH-----H
Confidence 9999999994 567 9999999764 33344332 1 23344456666542 2222111 1
Q ss_pred HHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCC-CccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCC-
Q 001531 862 MMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVN-GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS- 938 (1058)
Q Consensus 862 ~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~-~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~- 938 (1058)
.+..+.+.....+.....++|.++|++. ..+...|.. ....|.+.|.++ |++++.+.-.|..+||.+++-+
T Consensus 252 ~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~------gv~gE~ll~~L~~~gI~vStGSA 325 (386)
T COG1104 252 EIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFP------GVEGESLLLALDLAGIAVSTGSA 325 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeC------CCcHHHHHHhccccCeEEecccc
Confidence 2223445556666667788888888875 455555542 345677778776 6889999999999999875421
Q ss_pred ------CC-------------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 001531 939 ------WP-------------VPGTLMIEPTESESKEELDRYCDALISIREEIAQI 975 (1058)
Q Consensus 939 ------~p-------------~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~~~ 975 (1058)
-| ..++|||+++..+|++|+|+++++|.++++.++++
T Consensus 326 CsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~~ 381 (386)
T COG1104 326 CSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLREL 381 (386)
T ss_pred ccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhhh
Confidence 12 14789999999999999999999999999998873
No 32
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.94 E-value=2.8e-25 Score=257.82 Aligned_cols=304 Identities=21% Similarity=0.178 Sum_probs=232.3
Q ss_pred HhhHHHHHHHHHHHHHHHhcCCCC-cceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEE
Q 001531 205 IAQGRLESLLNFQTMIADLTGLPM-SNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKV 283 (1058)
Q Consensus 205 ~sqG~l~~l~e~q~~ia~L~G~~~-anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v 283 (1058)
.++...+.+.++++.+++++|++. .++.+..++|.+++.++.++.....++++|+++...|+++..+|+..++..|+++
T Consensus 37 ~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v 116 (371)
T PF00266_consen 37 RSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEV 116 (371)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEE
T ss_pred hhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccchhhh
Confidence 345567788899999999999998 7888889999988888877732113799999999999999999988887889999
Q ss_pred EEeCc--------hhhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCC-CCCcccceEE
Q 001531 284 VVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIV 352 (1058)
Q Consensus 284 ~~v~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~-~p~~~GaDiv 352 (1058)
++++. +++++ ++++++.|++++- +.+|.+.|+++|+++||++|++++||+ .+++|.+. +..++|+|++
T Consensus 117 ~~i~~~~~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~-~~~~g~~~id~~~~~~D~~ 195 (371)
T PF00266_consen 117 RVIPADPGGSLDLEDLEEALNPDTRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDA-AQSAGCVPIDLDELGADFL 195 (371)
T ss_dssp EEEEEGTTSSCSHHHHHHHHHTTESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE--TTTTTTSS--TTTTTESEE
T ss_pred ccccccccchhhhhhhhhhhccccceEEeecccccccEEeeeceehhhhhccCCceeEec-hhcccccccccccccccee
Confidence 88764 34555 7899999999875 789999999999999999999999954 45777553 4578999999
Q ss_pred EecCcccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeee-cccccccccccccCCCccchhHHHHHHH
Q 001531 353 VGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVA-MQTREQHIRRDKATSNICTAQALLANMA 431 (1058)
Q Consensus 353 vgs~k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~-lqtreq~irRekaTsni~t~~~l~a~~A 431 (1058)
++++|+|++ +||+|++++++++.+++.+...|+..- .. ..+. ........|++.||.|+ ..++++..
T Consensus 196 ~~s~~Kl~g-----p~G~g~l~v~~~~~~~~~p~~~~~~~~---~~-~~~~~~~~~~~~~~~~~GT~~~---~~~~~l~~ 263 (371)
T PF00266_consen 196 VFSSHKLGG-----PPGLGFLYVRPEAIERLRPAKPGGGYL---DF-PSLQEYGLADDARRFEGGTPNV---PAIYALNE 263 (371)
T ss_dssp EEESTSTTS-----SSTEEEEEEEHHHHHHHHTSSSSSSTT---TH-HHHHHHCHHSTTTGSSSSS--H---HHHHHHHH
T ss_pred eecccccCC-----CCchhhheehhhhhhcccccccccccc---cc-ccchhcccccccccccccceee---ehhhhHHH
Confidence 999955864 467999999999888886555553200 00 0000 00122344567789998 45556666
Q ss_pred HHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC----CCccEEEEecCC--HHHHHHHHHHcCceeeec--c
Q 001531 432 AMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL----PFFDTVKVKCAD--AHAIASAAYKIEMNLRVV--D 503 (1058)
Q Consensus 432 a~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~----~~~~~v~i~~~~--~~~l~~~L~~~GI~~~~~--~ 503 (1058)
++ .++...|++++.+++.++++++++.|+++++++++++ .....+++.+++ +.++.+.|.++||.++.- .
T Consensus 264 al--~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~~~I~~~~G~~~ 341 (371)
T PF00266_consen 264 AL--KLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLPGSDADDVVKYLEERGIAVSTGSAC 341 (371)
T ss_dssp HH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEETTSSHHHHHHHHHHHTEEEEESTTT
T ss_pred HH--hhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeecCCCHHHHHHHHhhcCEEEeccCcc
Confidence 65 5556779999999999999999999999986888642 123456777666 889999999999988651 1
Q ss_pred ----------CCeEEEEeccCCCHHHHHHH
Q 001531 504 ----------SNTVTASFDETTTLEDVDKL 523 (1058)
Q Consensus 504 ----------~~~lris~~~~~t~edid~l 523 (1058)
.+.+|+|++.+||++|||+|
T Consensus 342 ~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 342 AGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp CHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred cHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 38999999999999999986
No 33
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.94 E-value=1.2e-23 Score=246.58 Aligned_cols=380 Identities=14% Similarity=0.108 Sum_probs=253.6
Q ss_pred CCCccCCCCCHHHHHHHHHHHhcCccCcCcccccccccccCCcccc-cccccccccccccCCCCchhhhhcHHHHHHHHH
Q 001531 560 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATT-EMMPVTWPSFANIHPFAPADQAQGYQEMFNNLG 638 (1058)
Q Consensus 560 ~~p~~~~~~sE~e~~r~~~~l~~~~~~~~~~~i~lGs~t~~~~~~~-~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~ 638 (1058)
++| +++++.+|+++.+....-.|... ....+|+||....+.. +.+. .+.+-++..| ..+....+++.++.
T Consensus 16 ~~p--~~~~~~~~~~~~~~~~iyld~~a--~~~~~~~~tt~~~p~~~~~~~----~~l~~~~~np-~s~~~~~~le~~~~ 86 (431)
T TIGR01788 16 RMP--EEEMPPDAAYQLIHDELSLDGNP--RLNLATFVTTWMEPEARKLMD----ETINKNMIDK-DEYPQTAEIENRCV 86 (431)
T ss_pred cCC--CCCCCHHHHHHHHHHHhhhcCCc--ceeeeeeeCCCCCHHHHHHHH----HHHhcCCCCc-ccCccHHHHHHHHH
Confidence 456 68899999999999765444332 3456777876544332 2221 1111112222 22344558999999
Q ss_pred HHHHHHhCCC-c---eeee-cCchHHHHHHHHHHHHHHHHH----cCC-CCCCEEEEcCCCCCccHHHHHhCCcEEEEEc
Q 001531 639 EWLCTITGFD-S---FSLQ-PNAGAAGEYAGLMVIRAYHKA----RGD-HHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (1058)
Q Consensus 639 ~~lael~G~~-~---~~l~-~~sGa~ge~a~llair~y~~~----~G~-~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~ 708 (1058)
+|+++++|++ . ..+. +++|++++..++.++|..... .|. ..+..|+++..+|.+..+.+.+.|++++.||
T Consensus 87 ~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~ 166 (431)
T TIGR01788 87 NMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVP 166 (431)
T ss_pred HHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEe
Confidence 9999999998 2 2222 345555554444444321111 121 1234789999999888888888999999999
Q ss_pred CCCC-CCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHc------CCEEEEeccCcccccCcCC--
Q 001531 709 TDAK-GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN------GGQVYMDGANMNAQVGLTS-- 778 (1058)
Q Consensus 709 ~d~~-g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~------g~lv~vD~a~~~al~gl~~-- 778 (1058)
+|++ |.+|+++|+++|+ ++|.+|+++..| .+|.++ ||++|+++|+++ |+++|||+|+..++..+..
T Consensus 167 ~d~~~~~vd~~~L~~~i~---~~t~lV~~t~g~t~tG~id-pi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~ 242 (431)
T TIGR01788 167 MDPGRYVIDPEQVVEAVD---ENTIGVVCILGTTYTGEYE-DVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPD 242 (431)
T ss_pred cCCCceeeCHHHHHHHHh---hCCeEEEEEeCCCCCcccC-CHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCC
Confidence 9986 5999999999997 789999999886 589999 799999999999 9999999996522211111
Q ss_pred -C---CccCCcEEEeCCccccccCCCCCCCceeEEEEeCC--CCCCCCCC--CcccCCCCCCCCCCCCCCCCCccchhhH
Q 001531 779 -P---GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFLPSH--PVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (1058)
Q Consensus 779 -p---g~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~--l~~~lpg~--~vg~~~d~g~~~~~~~t~~i~sa~~g~~ 850 (1058)
+ ...++|.+++|.||++. |.+|+|+++++++ +.+.+... .++. .. .. ..+..+..|
T Consensus 243 ~~~~~~~~~~DSis~s~HK~~~-----~P~g~G~l~~r~~~~l~~~~~~~~~yl~~-----~~-~~---~t~~~sR~g-- 306 (431)
T TIGR01788 243 LEWDFRLPRVKSINVSGHKYGL-----VYPGVGWVIWRDEEALPEELIFHVNYLGG-----DE-PT---FTLNFSRPA-- 306 (431)
T ss_pred chhhcCCCCceEEEECchhccC-----CCCCcEEEEEeChHHcchhheecccccCC-----CC-CC---cceecCchH--
Confidence 1 23578999999999863 3237889999874 33322100 1110 00 00 011111111
Q ss_pred HHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHH
Q 001531 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 928 (1058)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~--~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~ 928 (1058)
..++..|..|..+|.+|++++.++++++++|+.++|++. ++++.+ .+..+.+.|...+.. ..+.+..++.++|.
T Consensus 307 ~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~---~~~~~iV~Fr~~~~~-~~~~~~~~l~~~L~ 382 (431)
T TIGR01788 307 NQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISD---GSGIPLVAFKLKDDA-DPGYTLYDLSHRLR 382 (431)
T ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeC---CCCceEEEEEeCCCC-CCCcCHHHHHHHHH
Confidence 123357999999999999999999999999999999875 555422 124455556654211 11356789999999
Q ss_pred HCCccccCCCCC--CC--CEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 929 DYGFHGPTMSWP--VP--GTLMIEPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 929 ~~Gi~~~~~~~p--~~--~~Lris~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
++||.++....| +. -.+|+++....+++.+|+|+++|++++.++
T Consensus 383 ~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 383 ERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred HCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 999986543333 22 358999988899999999999999988764
No 34
>PLN02263 serine decarboxylase
Probab=99.93 E-value=5.2e-24 Score=247.77 Aligned_cols=296 Identities=18% Similarity=0.238 Sum_probs=217.0
Q ss_pred cHHHHHHHHHHHHHHHhCCCc---eeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEE
Q 001531 629 GYQEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1058)
Q Consensus 629 G~~~~~~el~~~lael~G~~~---~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv 705 (1058)
+..+++.++.+|+++++|++. ....+++|+++++.++++.|.+. ++..+++|+.+|.+..+++.++|++++
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~------~~~vvy~S~~aH~Sv~KAa~llgi~~~ 203 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVF------PDGILYASRESHYSVFKAARMYRMECV 203 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhc------CCcEEEEcCCccHHHHHHHHhcCCcce
Confidence 678999999999999999964 24556677766655555555421 234788999999999999999999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCC-----EEEEeccCcccccCcCCC
Q 001531 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGG-----QVYMDGANMNAQVGLTSP 779 (1058)
Q Consensus 706 ~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~-----lv~vD~a~~~al~gl~~p 779 (1058)
.||+|++|++|+++|+++|++...++..|+.+.++ .+|.+| ||++|+++|+++|+ |+||||| ++|+..|
T Consensus 204 ~Vp~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiD-pi~eIa~i~~~~g~~~~~iwlHVDAA----~GG~~lP 278 (470)
T PLN02263 204 KVDTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVD-DLDLVIKTLEECGFSQDRFYIHCDGA----LFGLMMP 278 (470)
T ss_pred EeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCC-CHHHHHHHHHHcCCccCCeeEEEecc----chhhHhh
Confidence 99999999999999999998544456778788886 489999 79999999999997 9999998 4443222
Q ss_pred ---------CccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhH
Q 001531 780 ---------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (1058)
Q Consensus 780 ---------g~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~ 850 (1058)
+..++|.++.|.||++..|+++ |++.++++....+... .++.. ... ..+..+.-|
T Consensus 279 f~~~~~~~df~~~vDSIsvD~HK~l~~P~~c-----gvll~R~~~~~~~~~~-----~~Yl~-~~d---~ti~gSR~g-- 342 (470)
T PLN02263 279 FVKRAPKVTFKKPIGSVSVSGHKFVGCPMPC-----GVQITRMEHINVLSSN-----VEYLA-SRD---ATIMGSRNG-- 342 (470)
T ss_pred hcccccccCCCcCccEEEECCccccCCCcCE-----EEEEEehhhHhhhccC-----hHhhC-CCC---CCcCCCCCc--
Confidence 2234999999999999888765 5888886544322111 01100 000 112211112
Q ss_pred HHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHH
Q 001531 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD 929 (1058)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~ 929 (1058)
..++..|+.|+.+|.+|+++..++++++|+|+.++|++. +.++. . |....++|..+ . ++ +..
T Consensus 343 ~~al~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~-~---p~s~~V~f~~p--------~-~~----~~~ 405 (470)
T PLN02263 343 HAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREAGISAML-N---ELSSTVVFERP--------K-DE----EFV 405 (470)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-C---CCceEEEEecC--------c-hH----Hhh
Confidence 234678999999999999999999999999999999886 44432 2 33344555432 1 11 235
Q ss_pred CCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 930 YGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 930 ~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
+||+..+. ++.++|+++...+++.+|+|+++|++.....
T Consensus 406 ~gW~L~~~----~~~~Hivvmphv~~~~id~fi~DL~~~~~~~ 444 (470)
T PLN02263 406 RRWQLACQ----GNIAHVVVMPSVTIEKLDYFLKELVEKRSTW 444 (470)
T ss_pred cceEEccC----CCcEEEEEcCCCCHHHHHHHHHHHHHHHhhh
Confidence 79988754 3569999999889999999999999887644
No 35
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.93 E-value=4.5e-24 Score=238.23 Aligned_cols=372 Identities=15% Similarity=0.229 Sum_probs=267.6
Q ss_pred CCCCccCCCCCHHHHHHHHHHHhcCccCcCcccccccccccCCc--ccccccccccccccccCCCCchhhhhcHHHHHHH
Q 001531 559 LTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLN--ATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNN 636 (1058)
Q Consensus 559 ~~~p~~~~~~sE~e~~r~~~~l~~~~~~~~~~~i~lGs~t~~~~--~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~e 636 (1058)
-++| ..+++.+++++.+.+...-|--+..+ +-|+.++.. ...+.+.. -+..++|..+ +.+++..++..+
T Consensus 54 ~~lP--~~gl~~d~v~~~i~~~~~ld~~~~~~---~vS~~v~~~~~~~~~l~~~---~~~k~N~l~~-d~fp~~~~~e~~ 124 (491)
T KOG1383|consen 54 FTLP--SKGLPKDAVLELINDELMLDGNPRLG---LASGVVYWGEPELDKLIME---AYNKFNPLHP-DEFPVVRKLEAE 124 (491)
T ss_pred ecCC--CCCCCHHHHHHHHHHHhccCCCcccC---eeeEEEecCCcchhhHHHH---HHhhcCccCc-cccchhHHHHHH
Confidence 3678 68899999999999887766433322 224433322 11122111 1222478887 899999999999
Q ss_pred HHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHH----cCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCC-
Q 001531 637 LGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKA----RGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA- 711 (1058)
Q Consensus 637 l~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~----~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~- 711 (1058)
..+|+|.|++.+...+ +..++.+.++++++.+.|+.. +|. .++.|+++.+.|-...+++.+++++++.||+++
T Consensus 125 ~Vnm~~~L~~~~~~~~-g~~t~G~Ses~l~~~k~~~~~r~~~k~I-~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~~ 202 (491)
T KOG1383|consen 125 CVNMIANLFNAPSDSC-GCGTVGGSESGLAAKKSYRNRRKAQKGI-DKPNIVTPQNVHAAFEKAARYFEVELREVPLDEG 202 (491)
T ss_pred HHHHHHHHhcCCcccc-CccccccchHHHHHHHHHHHHHHhccCC-CCccccchHHHHHHHHHHHhhEEEEEEeeecccc
Confidence 9999999999885422 222222345788888777642 344 346788899999888899999999999999994
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHH-cCCEEEEeccCcccccCcCCC-Cc-----cC
Q 001531 712 KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHD-NGGQVYMDGANMNAQVGLTSP-GY-----IG 783 (1058)
Q Consensus 712 ~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~-~g~lv~vD~a~~~al~gl~~p-g~-----~G 783 (1058)
+.++|+..+.+.++ ++|++|+...|+ ++|.++ |+++|.++.-+ +++++|||+| +|||..| +. ||
T Consensus 203 ~~~~D~~k~~~~i~---eNti~lv~~~~~~p~G~~e-~ve~l~~l~~e~w~ipiHvDa~----~GgFi~p~~~~~~~~fd 274 (491)
T KOG1383|consen 203 DYRVDPGKVVRMID---ENTIMLVGSLPNFPTGEIE-DVEKLADLLLEIWDIPIHVDAC----LGGFINPAGYLNEEEFD 274 (491)
T ss_pred ceEecHHHHHHHhc---cceEEEEEEcCCCCccchh-hHHHHHHHHHHHhCCceeeccc----CccccccccccCccccc
Confidence 58999999999997 899999999998 589999 89999999999 9999999998 7888776 32 22
Q ss_pred -----CcEEEeCCccccccCCCCCCCceeEEEEeC-CCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHH
Q 001531 784 -----ADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 857 (1058)
Q Consensus 784 -----aDi~~~s~hKtf~~P~g~GGPg~G~i~~~~-~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~ 857 (1058)
.-.+..+.||. |+--+|+|++.-+. ++.+. .++. ..|| .++..++.++..+..| ...+++|
T Consensus 275 Fr~p~V~Sisa~~HKY-----Gl~~~G~~~vl~r~k~~~~~---q~~~-~~~w--~Gg~y~s~TlngSR~g--~~va~~w 341 (491)
T KOG1383|consen 275 FRVPGVTSISADGHKY-----GLAPAGSSWVLYRNKELLPH---QLFF-HTDW--LGGIYASPTLNGSRPG--SQVAAQW 341 (491)
T ss_pred cCCCCceeEeecccee-----eeeecCcEEEEEcccccccc---eEEE-eccc--cCccccCcccccCCcc--cHHHHHH
Confidence 23445667884 23335677777664 33221 1111 1123 0122344444433323 3456789
Q ss_pred HHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCcccc
Q 001531 858 TYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 935 (1058)
Q Consensus 858 a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~--~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~ 935 (1058)
+.|..+|.+||++.++++++++.+|++.|+++ +.+. |. |.. .++.+.+ ...+..++.+.|.++||+++
T Consensus 342 a~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~--gk--p~v--s~~~~~s----~~~~i~elsd~l~~~GW~ln 411 (491)
T KOG1383|consen 342 AALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIV--GK--PLV--SFILFGS----NDVNIFELSDLLRKKGWILN 411 (491)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceec--CC--CcE--EEEEccC----CccchhhhhHHHHhcCcCcc
Confidence 99999999999999999999999999999986 3332 32 222 2222221 24788999999999999999
Q ss_pred CCCCCCCCEEEEEcCCCCCHHH-HHHHHHHHHHHHHHHHH
Q 001531 936 TMSWPVPGTLMIEPTESESKEE-LDRYCDALISIREEIAQ 974 (1058)
Q Consensus 936 ~~~~p~~~~Lris~te~~t~ee-id~fi~aL~~i~~e~~~ 974 (1058)
.+++| .++.||+|..+..++ .|+|+.+++++++++..
T Consensus 412 alq~P--~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~ 449 (491)
T KOG1383|consen 412 ALQFP--AAIHICVTRVHAREDVADRFVADIRKVVEELKS 449 (491)
T ss_pred ccCCC--CceEEEEEeeeccHHHHHHHHHHHHHHHHHHHh
Confidence 99887 488999999887777 59999999999999988
No 36
>PRK02769 histidine decarboxylase; Provisional
Probab=99.93 E-value=1e-23 Score=243.81 Aligned_cols=299 Identities=17% Similarity=0.179 Sum_probs=216.4
Q ss_pred cHHHHHHHHHHHHHHHhCCCce---eeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEE
Q 001531 629 GYQEMFNNLGEWLCTITGFDSF---SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1058)
Q Consensus 629 G~~~~~~el~~~lael~G~~~~---~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv 705 (1058)
+..+++.++.+++++++|++.. .+.+++|++++ ++++..++. . .++++|+++..+|.++...+.++|++++
T Consensus 62 ~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean---~~a~~~ar~-~--~~~~~ii~s~~~H~Sv~ka~~~lg~~~~ 135 (380)
T PRK02769 62 NSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGN---LYGCYLARE-L--FPDGTLYYSKDTHYSVSKIARLLRIKSR 135 (380)
T ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHH---HHHHHHHHH-h--CCCcEEEeCCCceehHHHHHHHcCCCCc
Confidence 5678999999999999999742 24455556554 444443332 1 1346899999999999999999999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcC---CEEEEeccCcccccCcCC---
Q 001531 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNG---GQVYMDGANMNAQVGLTS--- 778 (1058)
Q Consensus 706 ~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g---~lv~vD~a~~~al~gl~~--- 778 (1058)
.|+++++|++|+++|+++|++.+.+|++|+++.++ .+|.++ ||++|+++|+++| +++|||+|+..+...+..
T Consensus 136 ~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~id-pi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~ 214 (380)
T PRK02769 136 VITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAID-NIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPP 214 (380)
T ss_pred eeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccC-CHHHHHHHHHHhCCCceEEEEEecccceeecccCccc
Confidence 99999899999999999998544459999999986 589999 7999999999998 699999986433222111
Q ss_pred C--CccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHH
Q 001531 779 P--GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPIS 856 (1058)
Q Consensus 779 p--g~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a 856 (1058)
+ +..|+|.+++|.||+++.|+ |.|++.++++....+... .++.. ... ..+.++. ++..++..
T Consensus 215 ~~d~~~~vDsis~s~HK~~~~P~-----g~G~l~~r~~~~~~~~~~-----~~yl~-~~d---~t~~GSR--~g~~~l~l 278 (380)
T PRK02769 215 PFSFADGIDSIAISGHKFIGSPM-----PCGIVLAKKKYVERISVD-----VDYIG-SRD---QTISGSR--NGHTALLL 278 (380)
T ss_pred cCCccCCCCEEEECCcccCCCCC-----CcEEEEEehhhhhhcccC-----ccccC-CCC---CCccCCC--CcHHHHHH
Confidence 1 22389999999999985443 577999998665544211 01100 000 1112112 12334567
Q ss_pred HHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCcccc
Q 001531 857 YTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 935 (1058)
Q Consensus 857 ~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~ 935 (1058)
|+.|..+|.+|+++..++++++++|+.++|++. +++.. .|..+.++|..+ + +++. +||++.
T Consensus 279 w~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~----~p~~~~v~f~~~--------~-~~~~-----~~w~l~ 340 (380)
T PRK02769 279 WAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQANGIPAWR----NPNSITVVFPCP--------S-ERIW-----KKWHLA 340 (380)
T ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEc----CCCceEEEEcCC--------C-HHHH-----hCeeEc
Confidence 999999999999999999999999999999875 55432 244444555432 1 2332 689887
Q ss_pred CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 936 TMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 936 ~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
+. ++.++|+++..+|++.||+|+++|.......
T Consensus 341 ~~----~~~~hi~~~~~~~~~~~~~f~~dl~~~~~~~ 373 (380)
T PRK02769 341 TS----GNQAHIITMPHHNKQQIDSLIDELIFDLKNP 373 (380)
T ss_pred cc----CCEEEEEECCCCCHHHHHHHHHHHHHHHhcc
Confidence 54 3689999999999999999999999876543
No 37
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.93 E-value=1.2e-23 Score=236.08 Aligned_cols=290 Identities=17% Similarity=0.181 Sum_probs=226.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHH--hccc-cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 001531 208 GRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMC--NNIQ-KGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1058)
Q Consensus 208 G~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a--~~~~-~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~ 284 (1058)
-..+++.+.++.||+++|+++.++.++.|||.+...++.. .... ++++++||++..+||++++.++.+ +..|++|.
T Consensus 41 ~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~L-e~~g~~Vt 119 (386)
T COG1104 41 EARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYL-ERQGFEVT 119 (386)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHH-HhcCCeEE
Confidence 3567899999999999999999999999999776655544 2111 136889999999999999999887 77899999
Q ss_pred EeCc--------hhhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCC-CCCcccceEEE
Q 001531 285 VSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVV 353 (1058)
Q Consensus 285 ~v~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~-~p~~~GaDivv 353 (1058)
++++ ++|++ |++||.+|.|.+. |.+|+|+||++|+++|+++|++++||+ ..++|-++ ++.++|+|++.
T Consensus 120 yl~V~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDA-vQa~Gkipi~~~~~~vD~ls 198 (386)
T COG1104 120 YLPVDSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQPIAEIGEICKERGILFHVDA-VQAVGKIPIDLEELGVDLLS 198 (386)
T ss_pred EeCCCCCCeEcHHHHHHhcCCCceEEEEEecccCeeecccHHHHHHHHHHcCCeEEEeh-hhhcCceeccccccCcceEE
Confidence 8776 46777 8999999999986 689999999999999999999999954 45777654 56788999999
Q ss_pred ecCcccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHH
Q 001531 354 GSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1058)
Q Consensus 354 gs~k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~ 433 (1058)
.|+++|++|. |.|++|+++.. ++.+.+.| |.+ |. - +-.||.|+ .++.|+.+|+
T Consensus 199 ~SaHK~~Gpk-----GiGaLyv~~~~--~~~p~i~G------GgQ---------E~-g-~RsGTenv---~~Ivg~~~A~ 251 (386)
T COG1104 199 FSAHKFGGPK-----GIGALYVRPGV--RLEPLIHG------GGQ---------ER-G-LRSGTENV---PGIVGFGKAA 251 (386)
T ss_pred eehhhccCCC-----ceEEEEECCCC--ccCceecc------CcC---------CC-C-CCCCCccH---HHHHHHHHHH
Confidence 9999997664 47889997654 24556666 221 11 1 22599998 5666666665
Q ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHHHhcC-CCeEEcCC--C-CccEEEEecCC--HHHHHHHHHHcCceeee------
Q 001531 434 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGL--P-FFDTVKVKCAD--AHAIASAAYKIEMNLRV------ 501 (1058)
Q Consensus 434 yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~-G~~~l~~~--~-~~~~v~i~~~~--~~~l~~~L~~~GI~~~~------ 501 (1058)
. +..+.++....++..+-++|.++|.+. +.+.+.+. + ..+.+.|.+++ ++.+.-.|..+||.++.
T Consensus 252 ~---~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~gE~ll~~L~~~gI~vStGSACsS 328 (386)
T COG1104 252 E---IAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVEGESLLLALDLAGIAVSTGSACSS 328 (386)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCcHHHHHHhccccCeEEeccccccC
Confidence 3 334567778888889999999999976 54666543 2 23567788887 88888889889998742
Q ss_pred -------------c----cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 502 -------------V----DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 502 -------------~----~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
. -.+.||+|++.+||++|+|.++++|..
T Consensus 329 ~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~ 373 (386)
T COG1104 329 GSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKE 373 (386)
T ss_pred CCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHH
Confidence 0 137899999999999999999999964
No 38
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.93 E-value=3e-23 Score=243.44 Aligned_cols=305 Identities=18% Similarity=0.141 Sum_probs=226.7
Q ss_pred HHHHHHHHHHHHHHhcCCC-CcceEeecchHHHHHHHHHHhccc-cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 001531 209 RLESLLNFQTMIADLTGLP-MSNASLLDEGTAAAEAMAMCNNIQ-KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 286 (1058)
Q Consensus 209 ~l~~l~e~q~~ia~L~G~~-~anasl~~~~Taa~ea~~~a~~~~-~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v 286 (1058)
..+.+.++++.+|+++|.+ +.++.+..|+|.++..++.++... .++|++||+++.+|++....++..++..|++++.+
T Consensus 60 ~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v 139 (403)
T TIGR01979 60 ATEAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFI 139 (403)
T ss_pred HHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEE
Confidence 4456778999999999998 567888899998877766654211 13789999999999999888887777789998887
Q ss_pred Cc--------hhhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCC-CCCcccceEEEec
Q 001531 287 DL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGS 355 (1058)
Q Consensus 287 ~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~-~p~~~GaDivvgs 355 (1058)
+. +++++ +++++++|++++| |.+|.+.|+++|+++||++|++++||. .++.|.+. +..++|+|+++++
T Consensus 140 ~~~~~~~~~~~~l~~~i~~~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~-a~~~g~~~~~~~~~~~d~~~~s 218 (403)
T TIGR01979 140 PLDDDGTLDLDDLEKLLTEKTKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDG-AQAVPHMPVDVQALDCDFYVFS 218 (403)
T ss_pred ecCCCCCCCHHHHHHHhccCCeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEc-hhhcCccccCccccCCCEEEEe
Confidence 64 34555 6788999999987 789999999999999999999999943 44555442 3457899999999
Q ss_pred CcccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeee-cccccccccccccCCCccchhHHHHHHHHHH
Q 001531 356 AQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVA-MQTREQHIRRDKATSNICTAQALLANMAAMY 434 (1058)
Q Consensus 356 ~k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~-lqtreq~irRekaTsni~t~~~l~a~~Aa~y 434 (1058)
++++.+| +|+|++++++++.+.+++...|+.... .+.+. ...+....|.+.||.|+ ..++++.+++
T Consensus 219 ~~K~~gp-----~G~g~l~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~~~~~~gt~~~---~~~~al~~al- 285 (403)
T TIGR01979 219 GHKMYGP-----TGIGVLYGKEELLEQMPPFLGGGEMIA----EVSFEETTYNEAPHKFEAGTPNI---AGVIGLGAAI- 285 (403)
T ss_pred cccccCC-----CCceEEEEchHHHhcCCCeecCCCcee----ecccCccccCCChhhcCCCCccH---HHHHHHHHHH-
Confidence 9334223 458999999999888876655532110 00000 00011223456688887 4455555555
Q ss_pred HHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCC----CccEEEEecCC--HHHHHHHHHHcCceeeec------
Q 001531 435 AVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP----FFDTVKVKCAD--AHAIASAAYKIEMNLRVV------ 502 (1058)
Q Consensus 435 l~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~----~~~~v~i~~~~--~~~l~~~L~~~GI~~~~~------ 502 (1058)
.++...|++++.+++.+++++++++|+++++++++.+. ....+.|.+++ ..++.+.|.++||.++..
T Consensus 286 -~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~~ 364 (403)
T TIGR01979 286 -DYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEGVHPHDVGTILDEEGIAVRSGHHCAQP 364 (403)
T ss_pred -HHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCCcCHHHHHHHHhhCCEEEcchhhhhHH
Confidence 55556689999999999999999999988449987432 23456666655 678999999999988531
Q ss_pred ------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001531 503 ------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 503 ------~~~~lris~~~~~t~edid~ll~al~ 528 (1058)
.++.+|+|++.+||++|+++++++|.
T Consensus 365 ~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~ 396 (403)
T TIGR01979 365 LMRRFGVPATCRASFYIYNTEEDIDALVEALK 396 (403)
T ss_pred HHHHhCCCCEEEEEeccCCCHHHHHHHHHHHH
Confidence 14789999999999999999999986
No 39
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.92 E-value=2.8e-23 Score=243.96 Aligned_cols=293 Identities=13% Similarity=0.091 Sum_probs=213.1
Q ss_pred HhcCCCCcceEeecchHHHHHHHHHHhccccC-CCCEEEEcCCCCHHHHHHHHHhhcCCCeEE----EEeCc--------
Q 001531 222 DLTGLPMSNASLLDEGTAAAEAMAMCNNIQKG-KKKTFIIASNCHPQTIDICITRADGFDIKV----VVSDL-------- 288 (1058)
Q Consensus 222 ~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~-~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v----~~v~~-------- 288 (1058)
+++|+++.++.+..++|.++..++.++ +..+ ++++|+++..+||++...|+..++..|+++ +.++.
T Consensus 80 ~l~g~~~~~v~~~~~~t~~l~~~~~~~-~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~ 158 (406)
T TIGR01814 80 RLVGAKEDEVVVMNTLTINLHLLLASF-YKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRL 158 (406)
T ss_pred cccCCCCCcEEEeCCchHHHHHHHHHh-cCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCH
Confidence 899999888999999998888776665 2211 234788999999999988876566678776 33332
Q ss_pred hhhhc-c---CCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCC-CCCcccceEEEecC-ccccc
Q 001531 289 KDIDY-K---SGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGV 361 (1058)
Q Consensus 289 ~~l~~-l---~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~-~p~~~GaDivvgs~-k~lg~ 361 (1058)
+++++ + +++|++|+++++ |.+|.+.|+++|+++||++|++++|++ .+++|.++ +..++|+|++++++ |+|+
T Consensus 159 ~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~-aq~~G~~~id~~~~gvD~~~~s~hK~l~- 236 (406)
T TIGR01814 159 EDILDTIEKNGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDL-AHAVGNVPLDLHDWGVDFACWCTYKYLN- 236 (406)
T ss_pred HHHHHHHHhcCCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEc-ccccCCcccccccCCCCEEEEcCccccC-
Confidence 34544 3 578999999987 578999999999999999999999943 55777653 44689999999999 6563
Q ss_pred ccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcc
Q 001531 362 PMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPE 441 (1058)
Q Consensus 362 P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~ 441 (1058)
|||| |+++++++....+.+++.|+.-..... .|........+..|++.||+|+ .+.+++.+++ .++...
T Consensus 237 ----g~pG-~~l~v~~~~~~~~~p~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~GT~~~---~~~~~l~~al--~~~~~~ 305 (406)
T TIGR01814 237 ----AGPG-AGAFVHEKHAHTERPRLAGWWGHARPT-RFKMDNTLGLIPCGFRISNPPI---LSVAALRGSL--DIFDQA 305 (406)
T ss_pred ----CCCC-eEEEEehhhhhhcCCCCCcccCCCCcc-ccccccccCCCccceeeCCccH---HHHHHHHHHH--HHHHhc
Confidence 4576 667776655444555566642111100 0111000012234677899998 5666777776 666677
Q ss_pred cHHHHHHHHHHHHHHHHHHHhcC-C---CeEEcCCC----CccEEEEecC-CHHHHHHHHHHcCceeeeccCCeEEEEe-
Q 001531 442 GLKTIAQRVHGLAGTFALGLKKL-G---TVEVQGLP----FFDTVKVKCA-DAHAIASAAYKIEMNLRVVDSNTVTASF- 511 (1058)
Q Consensus 442 Gl~~ia~~~~~~a~~l~~~L~~~-G---~~~l~~~~----~~~~v~i~~~-~~~~l~~~L~~~GI~~~~~~~~~lris~- 511 (1058)
|++++.+++..+++++++.|+++ | +++++++. ....++|..+ .+.++.+.|.++||.+....++.+|+|+
T Consensus 306 g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~~~~~~~~~~L~~~gi~v~~~~~~~iRiS~~ 385 (406)
T TIGR01814 306 GMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHPVPGKAVFQALIKRGVIGDKREPSVIRVAPV 385 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEecCCHHHHHHHHHHCCEEEeccCCCeEEEech
Confidence 99999999999999999999875 2 38877531 1235667766 4788999999999988654457899999
Q ss_pred ccCCCHHHHHHHHHHHh
Q 001531 512 DETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 512 ~~~~t~edid~ll~al~ 528 (1058)
+.+||++||++++++|.
T Consensus 386 ~~~nt~~did~l~~~l~ 402 (406)
T TIGR01814 386 PLYNTFVDVYDAVNVLE 402 (406)
T ss_pred hccCCHHHHHHHHHHHH
Confidence 68999999999999986
No 40
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.92 E-value=6.1e-23 Score=240.26 Aligned_cols=297 Identities=20% Similarity=0.192 Sum_probs=220.8
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 001531 206 AQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (1058)
Q Consensus 206 sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~ 285 (1058)
+++..+.+.++++.+++++|.+..++.+..++|.++..+..++....++||+||+++..|+++...+...++..|++++.
T Consensus 55 ~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~ 134 (397)
T TIGR01976 55 SRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKW 134 (397)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEE
Confidence 46677788899999999999987778777888876665554442111379999999999999998886667778999888
Q ss_pred eCc---------hhhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCC-CCCCcccceEEE
Q 001531 286 SDL---------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVV 353 (1058)
Q Consensus 286 v~~---------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l-~~p~~~GaDivv 353 (1058)
++. +++++ +++++++|++.+| |++|.+.|+++|+++||++|++++||. .++.+.. .+..++|+|+++
T Consensus 135 ~~~~~~~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~-a~~~~~~~~~~~~~~~d~~~ 213 (397)
T TIGR01976 135 ARVDEATGELHPDDLASLLSPRTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDA-VHYAPHGLIDVQATGADFLT 213 (397)
T ss_pred EeccccCCCcCHHHHHHhcCCCceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEeh-hhhccccCCCHHHcCCCEEE
Confidence 654 33555 6778999999988 789999999999999999999999943 3344432 234578999999
Q ss_pred ecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHH
Q 001531 354 GSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAA 432 (1058)
Q Consensus 354 gs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa 432 (1058)
+++ |+| ||..|++++++++++++.+....+ .. .....|.+.||.|+ ..+.++.++
T Consensus 214 ~s~~K~~-------g~~~G~l~~~~~~~~~l~~~~~~~----------~~----~~~~~~~~~gt~~~---~~~~~l~~a 269 (397)
T TIGR01976 214 CSAYKFF-------GPHMGILWGRPELLMNLPPYKLTF----------SY----DTGPERFELGTPQY---ELLAGVVAA 269 (397)
T ss_pred Eechhhc-------CCceEEEEEcHHHHhhCCCccccC----------cc----CCCcchhcCCCCCH---HHHHHHHHH
Confidence 998 544 245799999999888775432211 11 11223567899887 445555555
Q ss_pred H-HHHHhCc-----------ccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC----CCccEEEEecCC--HHHHHHHHHH
Q 001531 433 M-YAVYHGP-----------EGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL----PFFDTVKVKCAD--AHAIASAAYK 494 (1058)
Q Consensus 433 ~-yl~~~g~-----------~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~----~~~~~v~i~~~~--~~~l~~~L~~ 494 (1058)
+ ++...|. ++++++.+++.+++++++++|+++++++++.+ ...+.+.+..++ +.++.++|.+
T Consensus 270 l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 349 (397)
T TIGR01976 270 VDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVHGLPPQRVVRRLAD 349 (397)
T ss_pred HHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeCCcCHHHHHHHHHH
Confidence 5 2333332 14788899999999999999999866888743 133456666654 7889999999
Q ss_pred cCceeeec---------------cCCeEEEEeccCCCHHHHHHHHHHH
Q 001531 495 IEMNLRVV---------------DSNTVTASFDETTTLEDVDKLFIVF 527 (1058)
Q Consensus 495 ~GI~~~~~---------------~~~~lris~~~~~t~edid~ll~al 527 (1058)
+||.++.. ..+.+|+|++.+||++|+++++++|
T Consensus 350 ~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 350 QGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred CCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 99998642 1357999999999999999999875
No 41
>PLN02651 cysteine desulfurase
Probab=99.92 E-value=5.5e-23 Score=238.05 Aligned_cols=283 Identities=17% Similarity=0.138 Sum_probs=214.7
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHh-ccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 001531 207 QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCN-NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (1058)
Q Consensus 207 qG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~-~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~ 285 (1058)
....+.+.++++.+++++|.+..++.+..++|.++..++.++ ....++|++|+++..+||++...++.+. ..|++++.
T Consensus 39 ~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~-~~g~~v~~ 117 (364)
T PLN02651 39 WESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQ-QEGFEVTY 117 (364)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHH-hcCCEEEE
Confidence 344667888999999999998888888888887766554433 2111368999999999999999887654 57888888
Q ss_pred eCc--------hhhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCC-CCCCcccceEEEe
Q 001531 286 SDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVG 354 (1058)
Q Consensus 286 v~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l-~~p~~~GaDivvg 354 (1058)
++. +++++ +++++++|+++++ |.+|.+.|+++|+++||++|++++||+ .++.|.+ .+..++|+|++++
T Consensus 118 v~~~~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~-a~~~g~~~~~~~~~~~D~~~~ 196 (364)
T PLN02651 118 LPVKSDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDA-AQAVGKIPVDVDDLGVDLMSI 196 (364)
T ss_pred EccCCCCcCCHHHHHHhcCCCcEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEc-chhhCCcccCcccCCCCEEEe
Confidence 764 34555 7888999999886 689999999999999999999999943 4566644 3567899999999
Q ss_pred cCcccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHH
Q 001531 355 SAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 434 (1058)
Q Consensus 355 s~k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~y 434 (1058)
++++|++| +|.|++++++++..++.+.+.|.. . ..+++.||.|+ .+++++.+++
T Consensus 197 s~hK~~gp-----~G~g~l~v~~~~~~~l~p~~~g~~------~-----------~~~~~~GT~~~---~~~~~l~~al- 250 (364)
T PLN02651 197 SGHKIYGP-----KGVGALYVRRRPRVRLEPLMSGGG------Q-----------ERGRRSGTENT---PLVVGLGAAC- 250 (364)
T ss_pred chhhhCCC-----CceEEEEEcCCCCCCCCccccCCC------c-----------cCCccCCCccH---HHHHHHHHHH-
Confidence 99657544 468999999998888877665521 0 11356799998 5677888887
Q ss_pred HHHhCcccHHHHHHHHHHHHHHHHHHHhc-CCCeEEcCC--CC---ccEEEEecCC--HHHHHHHHHHcCceeee-----
Q 001531 435 AVYHGPEGLKTIAQRVHGLAGTFALGLKK-LGTVEVQGL--PF---FDTVKVKCAD--AHAIASAAYKIEMNLRV----- 501 (1058)
Q Consensus 435 l~~~g~~Gl~~ia~~~~~~a~~l~~~L~~-~G~~~l~~~--~~---~~~v~i~~~~--~~~l~~~L~~~GI~~~~----- 501 (1058)
.++.. +.+++.+++..++++++++|++ ++|++++.+ +. ...++|.+++ +.++.++|.+ |.++.
T Consensus 251 -~~~~~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~--i~v~~g~~c~ 326 (364)
T PLN02651 251 -ELAMK-EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAYVEGESLLMGLKE--VAVSSGSACT 326 (364)
T ss_pred -HHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCCCCHHHHHHHhCC--EEEEchhhcC
Confidence 33333 4589999999999999999986 534998853 21 2357777776 7889999865 65531
Q ss_pred ------------c------cCCeEEEEeccCCCHHHHH
Q 001531 502 ------------V------DSNTVTASFDETTTLEDVD 521 (1058)
Q Consensus 502 ------------~------~~~~lris~~~~~t~edid 521 (1058)
+ ..+.||+|++.+||++|||
T Consensus 327 ~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 327 SASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred CCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 0 1368999999999999985
No 42
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.92 E-value=1.2e-22 Score=235.58 Aligned_cols=361 Identities=18% Similarity=0.246 Sum_probs=234.1
Q ss_pred CHHHHHHHHHHHhcCccCcCcccccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCC
Q 001531 569 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD 648 (1058)
Q Consensus 569 sE~e~~r~~~~l~~~~~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~ 648 (1058)
||+|++..+.++-+..+....+.+.+..|++..+...+... .+...+...+ ....|..++..++++++++++|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~g~~ 75 (373)
T TIGR03812 1 SEEEVLEELKEYRSEDLKYSDGRILGSMCTNPHPIAVKAYD----MFIETNLGDP-GLFPGTKKIEEEVVGSLGNLLHLP 75 (373)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCcEEEEEeCCchHHHHHHHH----HHhhcCCCCc-ccCccHHHHHHHHHHHHHHHhCCC
Confidence 68999999999987777653333333445554444322221 1111011111 223466778889999999999997
Q ss_pred cee-eecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCCCCCHHHHHHHHHhc
Q 001531 649 SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEAN 727 (1058)
Q Consensus 649 ~~~-l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g~iD~e~L~~~i~~~ 727 (1058)
... +..++|+.+...++.+++... ..+ .++++|+++...|.++...+++.|++++.++.++++.+|+++|+++++
T Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~-~~~-~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~l~-- 151 (373)
T TIGR03812 76 DAYGYIVSGGTEANIQAVRAAKNLA-REE-KRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDEDYTVDVKDVEDLID-- 151 (373)
T ss_pred CCCeEEeccHHHHHHHHHHHHHHHH-hcc-CCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCCCCcCHHHHHHHHh--
Confidence 543 445555544433222332211 111 245789999988877777788999999999998889999999999997
Q ss_pred CCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCc-----CCCC----ccCCcEEEeCCcccccc
Q 001531 728 RDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-----TSPG----YIGADVCHLNLHKTFCI 797 (1058)
Q Consensus 728 ~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl-----~~pg----~~GaDi~~~s~hKtf~~ 797 (1058)
+++.++++..| |.+|.+. |+++|+++||++|+++++|+++.....++ ..+. ..|+|.++++.||+...
T Consensus 152 -~~~~~vv~~~~~~~tG~~~-~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~ 229 (373)
T TIGR03812 152 -DNTIGIVGIAGTTELGQID-DIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLS 229 (373)
T ss_pred -hCcEEEEEECCCCCCCccC-CHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCC
Confidence 55654444445 5689998 79999999999999999999974222111 1111 24889999999996532
Q ss_pred CCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHH
Q 001531 798 PHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAIL 877 (1058)
Q Consensus 798 P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~ 877 (1058)
|. |..|+++.++++.+.+.... .+.. . ... ....++ . +...++.+++.+..++++|+.+..++..+
T Consensus 230 ~~----~~G~~~~~~~~~~~~l~~~~-~~~~--~--~~~--~~~~gt-~--~~~~~~~~~~~l~~l~~~g~~~~~~~~~~ 295 (373)
T TIGR03812 230 PI----PAGGILFRSKSYLKYLSVDA-PYLT--V--KKQ--ATITGT-R--SGASAAATYAVIKYLGREGYRKIVAECME 295 (373)
T ss_pred cC----CceEEEEeCHHHHhhhcccC-cccC--C--CCC--cceEee-c--hhHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 21 23345656666554442110 0000 0 000 000011 1 12234456777888899999999999999
Q ss_pred HHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHH
Q 001531 878 NANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKE 956 (1058)
Q Consensus 878 ~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~e 956 (1058)
++++|+++|++. +...+. +..+.+.+..+ +..++.++|.++||.+..... ++.+||+++..+|++
T Consensus 296 ~~~~l~~~L~~~g~~~~~~----~~~~~v~~~~~--------~~~~v~~~L~~~gi~v~~~~~--~~~iRis~~~~~t~e 361 (373)
T TIGR03812 296 NTRYLVEELKKIGFEPVIE----PVLNIVAFEVD--------DPEEVRKKLRDRGWYVSVTRC--PKALRIVVMPHVTRE 361 (373)
T ss_pred HHHHHHHHHHhCCCeEEcC----CCceEEEEEeC--------CHHHHHHHHHHCCceeccCCC--CCEEEEEEECCCCHH
Confidence 999999999885 433332 23343445432 356899999999998864432 478999999999999
Q ss_pred HHHHHHHHHHHH
Q 001531 957 ELDRYCDALISI 968 (1058)
Q Consensus 957 eid~fi~aL~~i 968 (1058)
|+|+|+++|++|
T Consensus 362 did~l~~~L~~~ 373 (373)
T TIGR03812 362 HIEEFLEDLKEI 373 (373)
T ss_pred HHHHHHHHHhhC
Confidence 999999999764
No 43
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.92 E-value=1.5e-22 Score=234.99 Aligned_cols=307 Identities=18% Similarity=0.149 Sum_probs=228.8
Q ss_pred HhhHHHHHHHHHHHHHHHhcCCC-CcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEE
Q 001531 205 IAQGRLESLLNFQTMIADLTGLP-MSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKV 283 (1058)
Q Consensus 205 ~sqG~l~~l~e~q~~ia~L~G~~-~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v 283 (1058)
.++...+.+.++++.+++++|.+ ..++.+.+|+|.++..++.++.....++++|+++...|++....+...++..|+++
T Consensus 37 ~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~ 116 (373)
T cd06453 37 LSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKL 116 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEE
Confidence 34556677888999999999998 66788889999887777766532101689999999999998877766666778888
Q ss_pred EEeCc--------hhhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCC-CCCcccceEE
Q 001531 284 VVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIV 352 (1058)
Q Consensus 284 ~~v~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~-~p~~~GaDiv 352 (1058)
+.++. +++++ +++++++|++.+| |++|.+.|+++|.++||++|+++++|+ .++.+.+. +..++|+|++
T Consensus 117 ~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~-a~~~~~~~~~~~~~~~d~~ 195 (373)
T cd06453 117 KVVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDG-AQSAGHMPVDVQDLGCDFL 195 (373)
T ss_pred EEeecCCCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEh-hhhcCceeeeccccCCCEE
Confidence 88764 34555 6778999999887 689999999999999999999999953 44555443 3457899999
Q ss_pred EecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeee-cCCCCcceeeecccccccccccccCCCccchhHHHHHH
Q 001531 353 VGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSI-DSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANM 430 (1058)
Q Consensus 353 vgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~-d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~ 430 (1058)
++++ |.|+ +|+.|++++++++.+.+.....|... +......+ +......+.+.+|+|++ .++++.
T Consensus 196 ~~s~~K~~~------~~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~~~t~~~~---~~~al~ 262 (373)
T cd06453 196 AFSGHKMLG------PTGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEET----TYADLPHKFEAGTPNIA---GAIGLG 262 (373)
T ss_pred EeccccccC------CCCcEEEEEchHHhhcCCCeecCCCcccccccccc----ccCCCccccCCCCCCHH---HHHHHH
Confidence 9998 6554 25679999999998888765544311 10000001 11223445566788874 455656
Q ss_pred HHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEecCC--HHHHHHHHHHcCceeeec----
Q 001531 431 AAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCAD--AHAIASAAYKIEMNLRVV---- 502 (1058)
Q Consensus 431 Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~--~~~~~v~i~~~~--~~~l~~~L~~~GI~~~~~---- 502 (1058)
+++ .++..+|++++.++..++++++++.|+++++++++.+ .....+.|..++ +.++.+.|.++||.++..
T Consensus 263 ~al--~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gi~i~~g~~~~ 340 (373)
T cd06453 263 AAI--DYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLEGIHPHDVATILDQYGIAVRAGHHCA 340 (373)
T ss_pred HHH--HHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEECCcCHHHHHHHHHHCCEEeccCccch
Confidence 555 6777789999999999999999999999955888732 123345666654 789999999999987531
Q ss_pred --------cCCeEEEEeccCCCHHHHHHHHHHH
Q 001531 503 --------DSNTVTASFDETTTLEDVDKLFIVF 527 (1058)
Q Consensus 503 --------~~~~lris~~~~~t~edid~ll~al 527 (1058)
.++.+|+|++.++|++|+|+|+++|
T Consensus 341 ~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 341 QPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred hHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 1468999999999999999999875
No 44
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.92 E-value=3.3e-23 Score=243.25 Aligned_cols=333 Identities=20% Similarity=0.235 Sum_probs=237.9
Q ss_pred CCCCCHHHHHHHHHHHhcCccCcCcc-c--ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHH
Q 001531 565 NKYHTEHELLRYIHLLQSKELSLCHS-M--IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWL 641 (1058)
Q Consensus 565 ~~~~sE~e~~r~~~~l~~~~~~~~~~-~--i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~l 641 (1058)
+.+..+++++.++..+..+|..+..+ . ...++|.....+...... ..+.+-+...+ +++++..++..++..|+
T Consensus 35 ~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~---~~~~~~nl~d~-~~~p~a~~~E~~~v~~l 110 (460)
T COG0076 35 EKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELL---VSALNKNLGDP-DESPAAAELEERVVNML 110 (460)
T ss_pred ccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHH---HHHHhhcCCCc-ccChhHHHHHHHHHHHH
Confidence 57889999999999998787655431 1 234555444333333221 12333444555 77889999999999999
Q ss_pred HHHhCCCc--eeeecCchHHHHHHHHHHHHHHHH-Hc----C-CCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCC-C
Q 001531 642 CTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHK-AR----G-DHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-K 712 (1058)
Q Consensus 642 ael~G~~~--~~l~~~sGa~ge~a~llair~y~~-~~----G-~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~-~ 712 (1058)
++++|.+. +...+.+|+++++-+++++|.... .. + ..+.++|++|.++|.++.+++.++|++++.++.++ +
T Consensus 111 ~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~ 190 (460)
T COG0076 111 SDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTD 190 (460)
T ss_pred HHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccCc
Confidence 99999953 345666777777666666665432 11 1 11234799999999999999999999999999988 7
Q ss_pred CCCCHHHHHHHHHhcCCCeEE--EEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCC-----Cc---
Q 001531 713 GNINIEELRKAAEANRDNLST--LMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP-----GY--- 781 (1058)
Q Consensus 713 g~iD~e~L~~~i~~~~~~taa--V~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~p-----g~--- 781 (1058)
.++|+++|+++|+ ++++. |+.+.++ .+|.+| ||++|+++|+++|+++|||+| +||+..| +.
T Consensus 191 ~~id~~~l~~~i~---~~t~~g~vV~~aGtT~~G~iD-di~~ia~ia~~~~i~lHVDAA----~GG~~~pf~~~~~~~~f 262 (460)
T COG0076 191 YRIDVDALEEAID---ENTIGGVVVGTAGTTDTGSID-DIEELADIAEEYGIWLHVDAA----FGGFLLPFLEPDGRWDF 262 (460)
T ss_pred cccCHHHHHHHHH---hhccCceEEEEecCCCCCccC-CHHHHHHHHHHcCCcEEEEcc----ccceeecccCccchhhc
Confidence 9999999999998 67776 8888886 589999 899999999999999999998 5555433 22
Q ss_pred --cCCcEEEeCCccccccCCCCCCCceeEEEEeCC--CCC-------CCCCCCcccCCCCCCCCCCCCCCCCCccchhhH
Q 001531 782 --IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAP-------FLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (1058)
Q Consensus 782 --~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~--l~~-------~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~ 850 (1058)
.++|.++.|+||++..|++ .|++.+++. +.+ ++|+. ......+.++..|
T Consensus 263 ~l~~vdSIt~d~HK~g~aP~~-----~G~il~rd~e~l~~~~~~~~~yl~~~-------------~~~~~ti~~sr~~-- 322 (460)
T COG0076 263 GLEGVDSITVDGHKYGLAPIG-----CGVVLFRDEEALRRILIFADYYLPGG-------------GIPNFTILGSRPG-- 322 (460)
T ss_pred CCCCceEEEECcccccCCCCC-----ceEEEEECHHHhhhhhhcccccCCCC-------------CcCceeEeeccch--
Confidence 2789999999999887754 568888864 322 22221 0011111111212
Q ss_pred HHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCccceEEEEecccccccCCC-CHHHHHHHH
Q 001531 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGI-EPEDVAKRL 927 (1058)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~--~~v~~~g~~~~~~~e~vv~~~~~~~~~g~-~~~~v~k~L 927 (1058)
..+++.|+.+..+|.+|++++.++++++++|++++|++. ++++. .|..+.+.|+.++ .. ...+..+++
T Consensus 323 ~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~----~p~l~~V~fr~~~-----~~~~~~~~~~~~ 393 (460)
T COG0076 323 RQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVN----EPELPIVAFRLKD-----DEDTLADLSERL 393 (460)
T ss_pred HHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeec----CCccceEEEEcCC-----cccchhchHHHH
Confidence 256678999999999999999999999999999999985 67653 2445556666532 11 256777888
Q ss_pred HHCCccccCCC
Q 001531 928 MDYGFHGPTMS 938 (1058)
Q Consensus 928 ~~~Gi~~~~~~ 938 (1058)
...||.++...
T Consensus 394 ~~~gw~v~~~~ 404 (460)
T COG0076 394 DRRGWQVPAQL 404 (460)
T ss_pred HhcCceeeccc
Confidence 88999976433
No 45
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.92 E-value=8.2e-24 Score=241.43 Aligned_cols=316 Identities=18% Similarity=0.214 Sum_probs=244.7
Q ss_pred CcccccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHH
Q 001531 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (1058)
Q Consensus 164 n~~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea 243 (1058)
|.+.++|||+..+|..+.+++. .+.+ |++..+ .++...|+.+.+.++|+.+|+++|.+. +.+|.+|..++.+
T Consensus 43 nf~SNdYLGLa~~~~~~~a~~~-~~~~---~g~g~~--gsR~i~G~~~~h~~LE~~lA~f~g~e~--al~f~SGy~AN~~ 114 (388)
T COG0156 43 NFCSNDYLGLASHPELIEAAKA-AIRR---YGVGAG--GSRLISGTSDLHVELEEELADFLGAEA--ALLFSSGFVANLG 114 (388)
T ss_pred eeeccCcccccCCHHHHHHHHH-HHHH---hCCCCC--CcCcccCCcHHHHHHHHHHHHHhCCCc--EEEEcccchhHHH
Confidence 4567899999999998888875 5554 333333 667889999999999999999999997 8899999999999
Q ss_pred HHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhhc-cCC---C--EeEEEEEcC--CCceeeccH
Q 001531 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-KSG---D--VCGVLVQYP--GTEGEVLDY 315 (1058)
Q Consensus 244 ~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~~l~~-l~~---~--t~~V~v~~p--n~~G~i~dl 315 (1058)
++-++. +++|.|+.++.+|.|.++.++ +.+..-+.+.+.|+++|++ +.+ . .+.++|+.. ++.|.+.|+
T Consensus 115 ~i~~l~---~~~dli~~D~lnHASiidG~r-ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL 190 (388)
T COG0156 115 LLSALL---KKGDLIFSDELNHASIIDGIR-LSRAEVRRFKHNDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPL 190 (388)
T ss_pred HHHHhc---CCCcEEEEechhhhhHHHHHH-hCCCcEEEecCCCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCH
Confidence 988874 378999999999999999997 3555567777889988887 532 1 245555654 899999999
Q ss_pred HHHHHHHHhcCcEEEEEeccccccCCCCCC-----ccc-----ceEEEecC-cccccccCCCCCceEEEEEehhhhhcCC
Q 001531 316 GDFIKNAHANGVKVVMATDLLALTILKPPG-----ELG-----ADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMP 384 (1058)
Q Consensus 316 ~~I~~~a~~~galliV~a~~~slg~l~~p~-----~~G-----aDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp 384 (1058)
++|++++++||++++| ++.|+.|++.+-| .+| +||++++. |.||. .| ||+.++..+++.+
T Consensus 191 ~~l~~L~~ky~a~L~V-DEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs---~G----g~v~g~~~~~d~L- 261 (388)
T COG0156 191 PELVELAEKYGALLYV-DEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGS---SG----GYIAGSAALIDYL- 261 (388)
T ss_pred HHHHHHHHHhCcEEEE-EccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcc---cC----ceeeCcHHHHHHH-
Confidence 9999999999999999 5789999997654 244 38999997 99983 34 6888888877765
Q ss_pred CcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcC
Q 001531 385 GRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL 464 (1058)
Q Consensus 385 grivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~ 464 (1058)
|.++.+.|+|++..++.+++...++---+-..+..+++..++.++++.++..
T Consensus 262 ----------------------------~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~ 313 (388)
T COG0156 262 ----------------------------RNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKAL 313 (388)
T ss_pred ----------------------------HHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 3346678888877777776654332222233567788899999999887777
Q ss_pred CCeEEcC-CCCccEEEEecCC-HHHHHHHHHHcCceeeec-----c--CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 465 GTVEVQG-LPFFDTVKVKCAD-AHAIASAAYKIEMNLRVV-----D--SNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 465 G~~~l~~-~~~~~~v~i~~~~-~~~l~~~L~~~GI~~~~~-----~--~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
| +.+.. ...+-++.+..+. +.++.+.|.++||++..+ + ..++|+|++..||++||++++++|..
T Consensus 314 ~-~~~~~s~s~I~pv~~gd~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~ 386 (388)
T COG0156 314 G-LVLLPSESPIIPVILGDEERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSE 386 (388)
T ss_pred C-CccCCCCCCeeeeEeCCHHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHh
Confidence 7 66542 2223345565545 889999999999998653 1 26899999999999999999999863
No 46
>PLN02590 probable tyrosine decarboxylase
Probab=99.92 E-value=1.8e-22 Score=240.76 Aligned_cols=381 Identities=12% Similarity=0.074 Sum_probs=247.5
Q ss_pred CCCCCHHHHHHHHHHHhcCccCcCccccccccccc---CCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHH
Q 001531 565 NKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTM---KLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWL 641 (1058)
Q Consensus 565 ~~~~sE~e~~r~~~~l~~~~~~~~~~~i~lGs~t~---~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~l 641 (1058)
+++.+-+++++.+.+..........+..++|+... ......+++.. ..+-+.+.. +.+++..+++.++.+|+
T Consensus 105 ~~g~~~~~il~~~~~~i~p~~~~~~hP~f~a~~~~~~~~~~~lgd~l~s----a~n~~~~~~-~~sPa~t~lE~~vi~wl 179 (539)
T PLN02590 105 ERPESLKELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNA----GLSVVGFTW-LTSPAATELEIIVLDWL 179 (539)
T ss_pred CCCCCHHHHHHHHHHHHhccCCcCCCCCeeEeccCCCcHHHHHHHHHHH----hcccccCCc-ccCchhHHHHHHHHHHH
Confidence 45678889999998866555433344455664221 11111112111 112223333 56778889999999999
Q ss_pred HHHhCCCce--------eeecCchHHHHHHHHHHHHHHHH-HcCCC--CCCEEEEcCCCCCccHHHHHhCCc---EEEEE
Q 001531 642 CTITGFDSF--------SLQPNAGAAGEYAGLMVIRAYHK-ARGDH--HRNVCIIPVSAHGTNPATAAMCGM---KIVSV 707 (1058)
Q Consensus 642 ael~G~~~~--------~l~~~sGa~ge~a~llair~y~~-~~G~~--~r~~Vlip~saHg~~pa~a~~~G~---~vv~V 707 (1058)
++++|++.. .+..++|+.+++.++.++|.... ..|.. ++-.|++++.+|.+..+++.++|+ .++.|
T Consensus 180 ~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~V 259 (539)
T PLN02590 180 AKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLL 259 (539)
T ss_pred HHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEE
Confidence 999999852 34566777777767777765332 12221 233566788899999999999998 58999
Q ss_pred cCCC--CCCCCHHHHHHHHHhc---CCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCC--
Q 001531 708 GTDA--KGNINIEELRKAAEAN---RDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP-- 779 (1058)
Q Consensus 708 ~~d~--~g~iD~e~L~~~i~~~---~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~p-- 779 (1058)
|+|. ++++|+++|+++|++. +..+.+|+.|..+ .+|.|| ||++|+++|+++|+|+|||||+..+. +..|
T Consensus 260 p~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiD-pl~~Ia~i~~~~g~WlHVDaA~GG~a--l~~~~~ 336 (539)
T PLN02590 260 KTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVD-PLVPLGNIAKKYGIWLHVDAAYAGNA--CICPEY 336 (539)
T ss_pred eCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccC-CHHHHHHHHHHhCCeEEEecchhhhh--hcChhh
Confidence 9984 4799999999999742 2245678888876 489999 79999999999999999999843111 1222
Q ss_pred -----CccCCcEEEeCCccccccCCCCCCCceeEEEEeCC--CC-------CCCCCCCc--ccCCCCCCCCCCCCCCCCC
Q 001531 780 -----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LA-------PFLPSHPV--VSTGGIPAPEKSQPLGTIA 843 (1058)
Q Consensus 780 -----g~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~--l~-------~~lpg~~v--g~~~d~g~~~~~~~t~~i~ 843 (1058)
|-..+|.++.|.|||+..|+++ |++.+++. +. +++....- +...|. +... .. +
T Consensus 337 r~~~~Gie~ADSit~D~HK~l~~p~~c-----g~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~----~d~~-i~-l 405 (539)
T PLN02590 337 RKFIDGIENADSFNMNAHKWLFANQTC-----SPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNY----KDWQ-IS-L 405 (539)
T ss_pred HHHhcCCccCCEEEECchhhcCcCcCE-----EEEEecCHHHHHHHhhcCHHHhCCcccccccCCCc----cccC-CC-C
Confidence 2235899999999999988765 58888863 21 12211000 000000 0111 11 1
Q ss_pred ccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCccceEEEEeccccccc-C--CC
Q 001531 844 AAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNT-A--GI 918 (1058)
Q Consensus 844 sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~--~~v~~~g~~~~~~~e~vv~~~~~~~~-~--g~ 918 (1058)
+ ...-++..|+.|+.+|.+|+++..+++++.|+|+.+.|++. |+++. .+.+..++|+..+-... . +.
T Consensus 406 s----Rr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~----~~~l~iVcFr~~~~~~~~~~~~~ 477 (539)
T PLN02590 406 S----RRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVT----TRYFSLVCFRLAPVDGDEDQCNE 477 (539)
T ss_pred C----CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec----CCceEEEEEEecCCCCCHHHHHH
Confidence 1 11235678999999999999999999999999999999875 66653 24556667765421000 0 00
Q ss_pred CHHHHHHHHHHCCccc-cCCCCCCCCEEEEEcCC-CCCHHHHHHHHHHHHHHHHHH
Q 001531 919 EPEDVAKRLMDYGFHG-PTMSWPVPGTLMIEPTE-SESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 919 ~~~~v~k~L~~~Gi~~-~~~~~p~~~~Lris~te-~~t~eeid~fi~aL~~i~~e~ 972 (1058)
-..++.++|.+.|... ....+.-...||+++.. .++++|||.+++.|.+...++
T Consensus 478 ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~ 533 (539)
T PLN02590 478 RNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKF 533 (539)
T ss_pred HHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Confidence 1246777777777642 21112113478998854 677899999999998875554
No 47
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.92 E-value=2e-22 Score=234.60 Aligned_cols=292 Identities=17% Similarity=0.173 Sum_probs=217.7
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 001531 206 AQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (1058)
Q Consensus 206 sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~ 285 (1058)
+.-..+.+.++++.+++++|.++.++.+..++|.++..++.++.....++++|+++..+||++...++... ..|++++.
T Consensus 37 ~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~-~~G~~v~~ 115 (379)
T TIGR03402 37 GGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHLE-KQGYKVTY 115 (379)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHHH-HcCCEEEE
Confidence 34456778899999999999988888899999988887766542111256899999999999999887654 47999888
Q ss_pred eCc--------hhhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCC-CCCcccceEEEe
Q 001531 286 SDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVG 354 (1058)
Q Consensus 286 v~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~-~p~~~GaDivvg 354 (1058)
++. +++++ +++++++|+++++ |.+|.+.|+++|+++||++|++++||+ .++.|... +..++|+|++++
T Consensus 116 v~~~~~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~-~~~~g~~~~~~~~~~~D~~~~ 194 (379)
T TIGR03402 116 LPVDEEGRLDLEELRAAITDDTALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDA-VQAVGKIPIDLKEMNIDMLSL 194 (379)
T ss_pred EccCCCCcCCHHHHHHhcCCCcEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEEC-cccccccccCcccCCCCEEEE
Confidence 764 34555 7788999999886 789999999999999999999999943 45666443 446799999999
Q ss_pred cCcccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHH
Q 001531 355 SAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 434 (1058)
Q Consensus 355 s~k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~y 434 (1058)
+++++++| +|+|+++++++. .+.+.+.|. . +..+++.||.|+ .+++++.+++
T Consensus 195 s~~K~~gp-----~G~g~l~v~~~~--~~~p~~~g~------~-----------~~~~~~~gt~~~---~~~~~l~~al- 246 (379)
T TIGR03402 195 SGHKLHGP-----KGVGALYIRKGT--RFRPLLRGG------H-----------QERGRRAGTENV---PGIVGLGKAA- 246 (379)
T ss_pred cHHHcCCC-----CceEEEEECCCC--CCCCcccCC------c-----------cCCCcCCCCccH---HHHHHHHHHH-
Confidence 99447544 468999998764 233333331 0 011234688887 5666777766
Q ss_pred HHHhCcccHHHHHHHHHHHHHHHHHHHhc-CCCeEEcCCC--C-ccEEEEecCC--HHHHHHHHHHcCceeeec------
Q 001531 435 AVYHGPEGLKTIAQRVHGLAGTFALGLKK-LGTVEVQGLP--F-FDTVKVKCAD--AHAIASAAYKIEMNLRVV------ 502 (1058)
Q Consensus 435 l~~~g~~Gl~~ia~~~~~~a~~l~~~L~~-~G~~~l~~~~--~-~~~v~i~~~~--~~~l~~~L~~~GI~~~~~------ 502 (1058)
.+. .++++++.+++.++.++++++|++ +.++++.+++ . ...+.+.++. +.++.+.|.++||.++.-
T Consensus 247 -~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~ 324 (379)
T TIGR03402 247 -ELA-TEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYIEGEAILLLLDMEGICASSGSACTSG 324 (379)
T ss_pred -HHH-HHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecCCCHHHHHHhhccCCEEEEchhhcCCC
Confidence 222 346788889999999999999985 6548877532 2 1245555554 788999998899987531
Q ss_pred -----------------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 503 -----------------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 503 -----------------~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
..+.||+|++.+||++|||+++++|..
T Consensus 325 ~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~ 368 (379)
T TIGR03402 325 SLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPP 368 (379)
T ss_pred CCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHH
Confidence 136899999999999999999999964
No 48
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.91 E-value=5.8e-22 Score=230.18 Aligned_cols=301 Identities=15% Similarity=0.175 Sum_probs=222.0
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCc-ceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 001531 207 QGRLESLLNFQTMIADLTGLPMS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (1058)
Q Consensus 207 qG~l~~l~e~q~~ia~L~G~~~a-nasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~ 285 (1058)
++..+.+.++++.+++++|.+.. ++.+..++|.++..++.++ + ++|++|+++...|+++...++..++..|++++.
T Consensus 40 ~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~-~--~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~ 116 (376)
T TIGR01977 40 LRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGL-L--KEGDHVITTPMEHNSVARPLECLKEQIGVEITI 116 (376)
T ss_pred HHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhc-c--CCCCEEEECcchhhHHHHHHHHHHHHcCcEEEE
Confidence 34457788899999999999754 7878889998887776664 2 379999999999999998887777777988888
Q ss_pred eCc--------hhhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCC-CCCcccceEEEe
Q 001531 286 SDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVG 354 (1058)
Q Consensus 286 v~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~-~p~~~GaDivvg 354 (1058)
++. +++++ +++++++|++++| |.+|.+.|+++|.++||++|++++|| ..+++|.+. ...++|+|++++
T Consensus 117 v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD-~a~~~g~~~~~~~~~~~D~~~~ 195 (376)
T TIGR01977 117 VKCDNEGLISPERIKRAIKTNTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILD-AAQTAGVIPIDMTELAIDMLAF 195 (376)
T ss_pred EecCCCCCcCHHHHHHhcCCCCeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEE-hhhccCccCCCchhcCCCEEEe
Confidence 654 34555 7778999999987 68999999999999999999999994 456777553 345689999999
Q ss_pred cC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHH
Q 001531 355 SA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1058)
Q Consensus 355 s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~ 433 (1058)
++ |++++| ++.|+++++++. .+.....|.. +.+.+.+.. .+.-..|.+.+|.|+ ..+.++.+++
T Consensus 196 s~~K~l~~p-----~g~g~l~~~~~~--~~~~~~~~~~----~~~~~~~~~-~~~~~~r~~~~t~~~---~~~~a~~~al 260 (376)
T TIGR01977 196 TGHKGLLGP-----QGTGGLYIREGI--KLKPLKSGGT----GSHSALIDQ-PSELPDRFESGTLNT---PGIAGLNAGI 260 (376)
T ss_pred cccccccCC-----CCceEEEEcCCc--CcCceecCCC----ccccccccc-cccchhhccCCCCCH---HHHHHHHHHH
Confidence 99 666544 346788888764 1222222210 000111111 111122456788776 4455666565
Q ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--C--CccEEEEecCC--HHHHHHHHHHc-Cceeee-----
Q 001531 434 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--P--FFDTVKVKCAD--AHAIASAAYKI-EMNLRV----- 501 (1058)
Q Consensus 434 yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~--~--~~~~v~i~~~~--~~~l~~~L~~~-GI~~~~----- 501 (1058)
.++...|++++.++++++++++++.|.++++++++.+ + ....+.|..++ ..++.+.|.++ ||.++.
T Consensus 261 --~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~ 338 (376)
T TIGR01977 261 --KFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEGIDSEEVADILDEKFDIATRTGLHCA 338 (376)
T ss_pred --HHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECCCCHHHHHHHHhccCCEEEEcccccc
Confidence 6777889999999999999999999998765888742 1 23346666665 78899999987 887743
Q ss_pred ---------ccCCeEEEEeccCCCHHHHHHHHHHHh
Q 001531 502 ---------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 502 ---------~~~~~lris~~~~~t~edid~ll~al~ 528 (1058)
...+.+|++++.++|.+|+++++++|+
T Consensus 339 ~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~ 374 (376)
T TIGR01977 339 PLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALS 374 (376)
T ss_pred hHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHh
Confidence 124789999999999999999999985
No 49
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.91 E-value=6.7e-22 Score=229.13 Aligned_cols=343 Identities=15% Similarity=0.175 Sum_probs=236.1
Q ss_pred CCCHHHHHHHHHHHhcCCcccccccCCCCCCCCChHHHH---HHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHh
Q 001531 147 GLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVIL---RNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADL 223 (1058)
Q Consensus 147 ~~sE~e~~~~~~~la~~n~~~~~~lG~g~~~~~~p~~i~---~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L 223 (1058)
+.||.|++++|+++++++..+..|+|..+-+ .-|.++. +.+..+.+ .+....+..+.+.+++++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~la~~ 71 (371)
T PRK13520 1 GLSEEEILEELEEYRSEDLKYERILSSMCTE-PHPIARKAHEMFLETNLG--------DPGLFPGTAKLEEEAVEMLGEL 71 (371)
T ss_pred CCCHHHHHHHHHHHHhcCCCHHHeeeeeecC-chHHHHHHHHHHHhcCCC--------CcccCccHHHHHHHHHHHHHHH
Confidence 3689999999999999998877788887532 3444432 12222211 1111245677778999999999
Q ss_pred cCCCCcceEeecchHHHHHHHHHHhccc-cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-
Q 001531 224 TGLPMSNASLLDEGTAAAEAMAMCNNIQ-KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY- 293 (1058)
Q Consensus 224 ~G~~~anasl~~~~Taa~ea~~~a~~~~-~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~--------~~l~~- 293 (1058)
+|++..++.++++||.++..++.+.+.. .+++++|++++..|+++.+.++ ..|++++.++. ++|++
T Consensus 72 ~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~----~~g~~~~~v~~~~~~~~d~~~l~~~ 147 (371)
T PRK13520 72 LHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDKAAD----MLGVELRRAPLDDDYRVDVKAVEDL 147 (371)
T ss_pred hCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHHHHH----HcCceEEEecCCCCCcCCHHHHHHH
Confidence 9998777888899998877766544211 1257899999999999777653 35788877653 45666
Q ss_pred cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCC---CC-----CCcccceEEEecCcccccccC
Q 001531 294 KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL---KP-----PGELGADIVVGSAQRFGVPMG 364 (1058)
Q Consensus 294 l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l---~~-----p~~~GaDivvgs~k~lg~P~~ 364 (1058)
+++++++|++.++ |.+|.+.|+++|+++||++|++++||. .++.+.+ .. ...+|+|.+.+++++|+.+
T Consensus 148 i~~~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~-a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a-- 224 (371)
T PRK13520 148 IDDNTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDA-AFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLA-- 224 (371)
T ss_pred HhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEe-cchhHHHHhhcCCCCccccCCCCceEEECCccccCc--
Confidence 7777877776665 689999999999999999999999943 3333221 11 1246899999998666532
Q ss_pred CCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHH
Q 001531 365 YGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 444 (1058)
Q Consensus 365 ~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~ 444 (1058)
|+|..++++.++++.+.+... .+ |...- .+. -..+|.+. ....++.++ +..++.+|++
T Consensus 225 -~~~~G~~~~~~~~~~~~l~~~----------~~-~~~~~-~~~----~~~gt~~~---~~~~~~~~a--l~~l~~~g~~ 282 (371)
T PRK13520 225 -PIPAGGILFRDESYLDALAVD----------TP-YLTSK-KQA----TLTGTRSG---AGVAATYAV--MKYLGREGYR 282 (371)
T ss_pred -cCCceEEEEcCHHHHHhhccc----------Cc-cccCC-CCc----ceEeeccC---hHHHHHHHH--HhhhcHhHHH
Confidence 234445555566676665310 00 10000 000 01234333 223333344 3667888999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCCHHHHHHHHHHcCceeeecc-CCeEEEEeccCCCHHHHHHH
Q 001531 445 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVD-SNTVTASFDETTTLEDVDKL 523 (1058)
Q Consensus 445 ~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~~~~l~~~L~~~GI~~~~~~-~~~lris~~~~~t~edid~l 523 (1058)
++.+++.+++++|+++|+++| ++++..+..+.+.+..+.+.++.++|.++||.++... ++.+|+|++.++|++|++++
T Consensus 283 ~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~v~~~~~~~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edi~~~ 361 (371)
T PRK13520 283 KVVERCMENTRWLAEELKERG-FEPVIEPVLNIVAFDDPNPDEVREKLRERGWRVSVTRCPEALRIVCMPHVTREHIENF 361 (371)
T ss_pred HHHHHHHHHHHHHHHHHHhCC-CEEecCCCceEEEEecCCHHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHH
Confidence 999999999999999999997 8844333344566666667899999999999887653 46799999999999999999
Q ss_pred HHHHh
Q 001531 524 FIVFA 528 (1058)
Q Consensus 524 l~al~ 528 (1058)
+++|.
T Consensus 362 ~~~l~ 366 (371)
T PRK13520 362 LEDLK 366 (371)
T ss_pred HHHHH
Confidence 99985
No 50
>PLN02880 tyrosine decarboxylase
Probab=99.90 E-value=8.3e-22 Score=234.98 Aligned_cols=386 Identities=13% Similarity=0.082 Sum_probs=245.5
Q ss_pred CCCCCHHHHHHHHHHHhcCccCcCcccccccccccCCcccccccccccccccc--cCCCC-chhhhhcHHHHHHHHHHHH
Q 001531 565 NKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFAN--IHPFA-PADQAQGYQEMFNNLGEWL 641 (1058)
Q Consensus 565 ~~~~sE~e~~r~~~~l~~~~~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~--~~P~~-p~e~~qG~~~~~~el~~~l 641 (1058)
+++.+-+++++.+.+.-.......++..++|+........ ... .++.. +++.. ..+.+++..+++.++.+|+
T Consensus 57 ~~~~~~~~~l~~~~~~i~~~~~~~~hP~f~~~~~~~~~~~-~~l----ad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl 131 (490)
T PLN02880 57 NQPETLDQVLDDVQAKILPGVTHWQSPNYFAYYPSNSSVA-GFL----GEMLSAGLNIVGFSWITSPAATELEMIVLDWL 131 (490)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeccCCCcHH-HHH----HHHHHHhhccCCcccccCcccHHHHHHHHHHH
Confidence 4667888999999875554433334455566421111110 110 11111 22111 1145677889999999999
Q ss_pred HHHhCCCce--------eeecCchHHHHHHHHHHHHHHHH-HcCCC--CCCEEEEcCCCCCccHHHHHhCCcE---EEEE
Q 001531 642 CTITGFDSF--------SLQPNAGAAGEYAGLMVIRAYHK-ARGDH--HRNVCIIPVSAHGTNPATAAMCGMK---IVSV 707 (1058)
Q Consensus 642 ael~G~~~~--------~l~~~sGa~ge~a~llair~y~~-~~G~~--~r~~Vlip~saHg~~pa~a~~~G~~---vv~V 707 (1058)
++++|++.. .+..++|+.+++.+|++.|.+.. ..|.. ++-.|++++.+|.+..+++.++|+. ++.|
T Consensus 132 ~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~V 211 (490)
T PLN02880 132 AKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLL 211 (490)
T ss_pred HHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEe
Confidence 999999852 34556778888777777775432 22221 2345677888999999999999994 8899
Q ss_pred cCCC--CCCCCHHHHHHHHHhc---CCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCC---
Q 001531 708 GTDA--KGNINIEELRKAAEAN---RDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS--- 778 (1058)
Q Consensus 708 ~~d~--~g~iD~e~L~~~i~~~---~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~--- 778 (1058)
|+|+ ++++|+++|+++|++. +..+.+|+.+..+ .+|.++ |+++|+++|+++|+|+|||||+..+. +..
T Consensus 212 p~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiD-pl~eI~~i~~~~~iwlHVDaA~gg~~--~~~~~~ 288 (490)
T PLN02880 212 KTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVD-PLLELGKIAKSNGMWFHVDAAYAGSA--CICPEY 288 (490)
T ss_pred ecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccC-cHHHHHHHHHHcCCEEEEehhhHHHH--HhCHHH
Confidence 9975 5799999999999742 2246778888876 489999 79999999999999999999853221 112
Q ss_pred ----CCccCCcEEEeCCccccccCCCCCCCceeEEEEeCC--CCCCC---CCCCcccCCCC-CCCC-CCCCCCCCCccch
Q 001531 779 ----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFL---PSHPVVSTGGI-PAPE-KSQPLGTIAAAPW 847 (1058)
Q Consensus 779 ----pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~--l~~~l---pg~~vg~~~d~-g~~~-~~~~t~~i~sa~~ 847 (1058)
.|-.++|.++.|+|||++.|++ .|++.+++. +...+ +..+.....+. +... ...... ++
T Consensus 289 ~~~l~gie~aDSit~d~HKwl~~P~~-----~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~--~~--- 358 (490)
T PLN02880 289 RHYIDGVEEADSFNMNAHKWFLTNFD-----CSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQIP--LG--- 358 (490)
T ss_pred HHHhcCchhcCEEEECchhhcCCCcc-----EEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCcC--CC---
Confidence 2335799999999999988765 468888852 11111 00000000000 0000 000100 11
Q ss_pred hhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCccceEEEEecccccccCCCCH----H
Q 001531 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEP----E 921 (1058)
Q Consensus 848 g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~--~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~----~ 921 (1058)
....++..|+.++.+|.+|+++..++++++|+|+.+.|++. ++++. + +..+.++|.+++... ..... .
T Consensus 359 -rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~--~--~~~~iv~Fr~~~~~~-~~~~~~~~n~ 432 (490)
T PLN02880 359 -RRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVT--P--RIFSLVCFRLVPPKN-NEDNGNKLNH 432 (490)
T ss_pred -CcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEec--C--CceEEEEEEEeCCCC-ChhhHHHHHH
Confidence 11224567999999999999999999999999999999875 55542 1 345556676643110 00011 3
Q ss_pred HHHHHHHHCCcc-ccCCCCCCCCEEEEEcCCCC-CHHHHHHHHHHHHHHHHHHHH
Q 001531 922 DVAKRLMDYGFH-GPTMSWPVPGTLMIEPTESE-SKEELDRYCDALISIREEIAQ 974 (1058)
Q Consensus 922 ~v~k~L~~~Gi~-~~~~~~p~~~~Lris~te~~-t~eeid~fi~aL~~i~~e~~~ 974 (1058)
++.++|.+.|.. +....+.....+|+++.... +++|+|++++.|.++.+++..
T Consensus 433 ~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~~ 487 (490)
T PLN02880 433 DLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLLG 487 (490)
T ss_pred HHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 455666655543 33222333457999987754 569999999999998777643
No 51
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.90 E-value=2.7e-21 Score=227.19 Aligned_cols=311 Identities=17% Similarity=0.190 Sum_probs=211.1
Q ss_pred HHHHHHHHHHHHHHHhCC-Ccee-eecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccH----HHHHhCCcE
Q 001531 630 YQEMFNNLGEWLCTITGF-DSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMK 703 (1058)
Q Consensus 630 ~~~~~~el~~~lael~G~-~~~~-l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~p----a~a~~~G~~ 703 (1058)
..+.+.++++.+++++|. +... +.+++++++. ..+++.+... ...++++||++...|..+. ..++..|++
T Consensus 65 ~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l---~~~~~~~~~~-~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~ 140 (406)
T PRK09295 65 ATEKMENVRKQAALFINARSAEELVFVRGTTEGI---NLVANSWGNS-NVRAGDNIIISEMEHHANIVPWQMLCARVGAE 140 (406)
T ss_pred HHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHH---HHHHHHhhhh-cCCCcCEEEECcchhhHHHHHHHHHHHHcCcE
Confidence 456788999999999997 4433 3344444443 2333332110 1135678999988775431 235678999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc
Q 001531 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (1058)
Q Consensus 704 vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~ 782 (1058)
++.++.+++|.+|+++|+++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++..+...+ ...++
T Consensus 141 v~~v~~~~~~~~d~~~l~~~i~---~~t~lv~l~~~~n~tG~~~-~~~~i~~~~~~~~~~vivD~a~~~g~~~~-~~~~~ 215 (406)
T PRK09295 141 LRVIPLNPDGTLQLETLPALFD---ERTRLLAITHVSNVLGTEN-PLAEMIALAHQHGAKVLVDGAQAVMHHPV-DVQAL 215 (406)
T ss_pred EEEEecCCCCCCCHHHHHHhcC---CCcEEEEEecchhcccccC-CHHHHHHHHHHcCCEEEEEcccccCcccc-Cchhc
Confidence 9999998889999999999996 78999999998 4799998 79999999999999999999975332222 22467
Q ss_pred CCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCC----CC--------CCCCCCCCCCCCCccchhhH
Q 001531 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG----GI--------PAPEKSQPLGTIAAAPWGSA 850 (1058)
Q Consensus 783 GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~----d~--------g~~~~~~~t~~i~sa~~g~~ 850 (1058)
|+|++++++||.+ |.+|+|++++++++.+.+|....|... +. +.++.+.+|.++.
T Consensus 216 ~~D~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~------- 282 (406)
T PRK09295 216 DCDFYVFSGHKLY------GPTGIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTG------- 282 (406)
T ss_pred CCCEEEeehhhcc------CCCCcEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHH-------
Confidence 9999999999955 334789999998877767643332210 00 0011122222222
Q ss_pred HHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHC
Q 001531 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (1058)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~ 930 (1058)
......+.+..+.+.|+.++.++....++++.++|+++..+...++. ...+.+.|.++ +.+..++.+.|.++
T Consensus 283 -~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~-~~~~iv~~~~~------~~~~~~~~~~L~~~ 354 (406)
T PRK09295 283 -GIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQ-NRLGVIAFNLG------KHHAYDVGSFLDNY 354 (406)
T ss_pred -HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC-CCceEEEEEEC------CcCHHHHHHHHHhC
Confidence 12223444555555577777777778899999999875333222321 12233445543 35678899999999
Q ss_pred CccccCCC---------CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001531 931 GFHGPTMS---------WPVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1058)
Q Consensus 931 Gi~~~~~~---------~p~~~~Lris~te~~t~eeid~fi~aL~~i~~ 970 (1058)
||.+..-. +..++.+|+|++.++|++|||+|+++|+++..
T Consensus 355 gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 355 GIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred CeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 99874321 11347899999999999999999999998743
No 52
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.90 E-value=3.4e-21 Score=226.06 Aligned_cols=313 Identities=17% Similarity=0.189 Sum_probs=210.7
Q ss_pred HHHHHHHHHHHHHHhCCC-cee-eecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccH----HHHHhCCcEE
Q 001531 631 QEMFNNLGEWLCTITGFD-SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMKI 704 (1058)
Q Consensus 631 ~~~~~el~~~lael~G~~-~~~-l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~p----a~a~~~G~~v 704 (1058)
.+.+.++++.+++++|.+ ... +..+++++|. .++++.+... ..+++++||+++..|.++. ..+...|+++
T Consensus 61 ~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l---~~~~~~~~~~-~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~ 136 (403)
T TIGR01979 61 TEAYEAVREKVAKFINAASDEEIVFTRGTTESI---NLVAYSWGDS-NLKAGDEIVISEMEHHANIVPWQLLAERTGATL 136 (403)
T ss_pred HHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHH---HHHHHHhhhh-cCCCCCEEEECcchhhHHHHHHHHHHHhcCcEE
Confidence 346778999999999998 333 3444444443 2223322110 1135678999988886643 2345789999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccC
Q 001531 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 783 (1058)
Q Consensus 705 v~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~G 783 (1058)
+.++++++|.+|+++|+++++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+... ....+++
T Consensus 137 ~~v~~~~~~~~~~~~l~~~i~---~~~~lv~~~~~~~~tG~~~-~~~~i~~~~~~~~~~~ivD~a~~~g~~~-~~~~~~~ 211 (403)
T TIGR01979 137 KFIPLDDDGTLDLDDLEKLLT---EKTKLVAITHVSNVLGTVN-PVEEIAKLAHQVGAKVLVDGAQAVPHMP-VDVQALD 211 (403)
T ss_pred EEEecCCCCCCCHHHHHHHhc---cCCeEEEEEcccccccccC-CHHHHHHHHHHcCCEEEEEchhhcCccc-cCccccC
Confidence 999999889999999999996 789999999985 689998 7999999999999999999987532211 1224578
Q ss_pred CcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCC-CC----C-C-----CCCCCCCCCCCccchhhHHH
Q 001531 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG-GI----P-A-----PEKSQPLGTIAAAPWGSALI 852 (1058)
Q Consensus 784 aDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~-d~----g-~-----~~~~~~t~~i~sa~~g~~~~ 852 (1058)
+|++++++||+|+ .+|+|++++++++.+.++....+... +. . . +..+.++. +...
T Consensus 212 ~d~~~~s~~K~~g------p~G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~--------~~~~ 277 (403)
T TIGR01979 212 CDFYVFSGHKMYG------PTGIGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTP--------NIAG 277 (403)
T ss_pred CCEEEEecccccC------CCCceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCc--------cHHH
Confidence 9999999999763 34689999998776666432222110 00 0 0 00011111 1122
Q ss_pred HHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCC--ccceEEEEecccccccCCCCHHHHHHHHHHC
Q 001531 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNG--TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (1058)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~--~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~ 930 (1058)
+++.++.+..+.+.|+.+..++....++++.++|+++..+..-++.. ...+.+.|.++ +.+..++.+.|.++
T Consensus 278 ~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~------~~~~~~~~~~L~~~ 351 (403)
T TIGR01979 278 VIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVE------GVHPHDVGTILDEE 351 (403)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeC------CcCHHHHHHHHhhC
Confidence 23334555555556777778888899999999998752221112211 12233445554 35678899999999
Q ss_pred CccccCCC---------CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 931 GFHGPTMS---------WPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 931 Gi~~~~~~---------~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
||.+.... +..++++||+++.++|++|+|+|+++|+++++++
T Consensus 352 gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 352 GIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred CEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 99875321 2235789999999999999999999999887653
No 53
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.89 E-value=7.4e-21 Score=222.92 Aligned_cols=311 Identities=16% Similarity=0.144 Sum_probs=208.9
Q ss_pred HHHHHHHHHHHHHHHhCCC-cee-eecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccH----HHHHhCCcE
Q 001531 630 YQEMFNNLGEWLCTITGFD-SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMK 703 (1058)
Q Consensus 630 ~~~~~~el~~~lael~G~~-~~~-l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~p----a~a~~~G~~ 703 (1058)
..+.+.++++.+++++|.+ ... +..+++++|.. ++++.+.. +...++++||+++..|.++. ..++..|++
T Consensus 58 ~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~---~~~~~~~~-~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~ 133 (398)
T TIGR03392 58 LTARYELARQQVARFLNAPDAENIVWTRGTTESIN---LVAQSYAR-PRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAK 133 (398)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHH---HHHHHhhh-ccCCCCCEEEECCcchhHHHHHHHHHHHHcCcE
Confidence 3456788999999999985 433 33444554443 33333311 11135678999988776532 235788999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc
Q 001531 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (1058)
Q Consensus 704 vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~ 782 (1058)
++.++.++++.+|+++|+++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+...+ ...++
T Consensus 134 v~~v~~~~~~~~~~~~l~~~i~---~~t~lv~i~~~~n~tG~~~-~~~~i~~~~~~~~~~~ivD~a~~~~~~~~-~~~~~ 208 (398)
T TIGR03392 134 VVKLPIGADLLPDIRQLPELLT---PRTRILALGQMSNVTGGCP-DLARAITLAHQYGAVVVVDGAQGVVHGPP-DVQAL 208 (398)
T ss_pred EEEEecCCCCCcCHHHHHHHhc---cCceEEEEECccccccccC-CHHHHHHHHHHcCCEEEEEhhhhcCCCCC-Chhhc
Confidence 9999998888899999999996 789999999985 789998 79999999999999999999974322111 12356
Q ss_pred CCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCC----C---CC----CCCCCCCCCCCCccchhhHH
Q 001531 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG----G---IP----APEKSQPLGTIAAAPWGSAL 851 (1058)
Q Consensus 783 GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~----d---~g----~~~~~~~t~~i~sa~~g~~~ 851 (1058)
++|++++++||.| |.+|+|++++++++.+.++....+... + +. .++.+.+|.++. .
T Consensus 209 ~~d~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~-----~-- 275 (398)
T TIGR03392 209 DIDFYAFSGHKLY------GPTGIGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIA-----G-- 275 (398)
T ss_pred CCCEEEEeccccc------CCCceEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHH-----H--
Confidence 8999999999966 334689999998776666432211100 0 00 001122222221 1
Q ss_pred HHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCC
Q 001531 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 931 (1058)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~G 931 (1058)
.+...+.+..+...|+.++.++....++++.+.|+++..+...++.. ...+.|.++ +.+.+++.++|.++|
T Consensus 276 -~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~~--~~i~~~~~~------~~~~~~l~~~L~~~g 346 (398)
T TIGR03392 276 -VIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFRCPG--SSLLAFDFA------GVHHSDLAALLAESG 346 (398)
T ss_pred -HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC--CcEEEEEeC------CcCHHHHHHHHHhCC
Confidence 11223334444455677777777788999999998753332212111 122344443 467789999999999
Q ss_pred ccccCCCC---------CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 932 FHGPTMSW---------PVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 932 i~~~~~~~---------p~~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
|.+..... ...+.+|||+...+|++|+|+|+++|++++++
T Consensus 347 I~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~ 395 (398)
T TIGR03392 347 IALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAALEL 395 (398)
T ss_pred EEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHHHHH
Confidence 98753221 12478999999999999999999999988765
No 54
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.89 E-value=8.7e-21 Score=220.16 Aligned_cols=308 Identities=20% Similarity=0.208 Sum_probs=209.5
Q ss_pred cHHHHHHHHHHHHHHHhCCC-cee-eecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccH----HHHHhCCc
Q 001531 629 GYQEMFNNLGEWLCTITGFD-SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGM 702 (1058)
Q Consensus 629 G~~~~~~el~~~lael~G~~-~~~-l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~p----a~a~~~G~ 702 (1058)
...+.+.++++.+++++|.+ ... +..++++.+. .++++++... ..++++||+++..|+.+. ..++..|+
T Consensus 40 ~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~---~~~~~~l~~~--~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~ 114 (373)
T cd06453 40 RATDAYEAAREKVARFINAPSPDEIIFTRNTTEAI---NLVAYGLGRA--NKPGDEIVTSVMEHHSNIVPWQQLAERTGA 114 (373)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHH---HHHHHHhhhc--CCCCCEEEECcchhHHHHHHHHHHHhhcCc
Confidence 34566788999999999988 433 3444454443 3344443221 114678999888776542 23457899
Q ss_pred EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCc
Q 001531 703 KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY 781 (1058)
Q Consensus 703 ~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~ 781 (1058)
+++.|+.+.++.+|+++|+++++ +++++|++++|+ .+|.+. |+++|.++|+++|+++++|+++..+... ....+
T Consensus 115 ~~~~v~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~~~tG~~~-~~~~i~~~~~~~~~~li~D~a~~~~~~~-~~~~~ 189 (373)
T cd06453 115 KLKVVPVDDDGQLDLEALEKLLT---ERTKLVAVTHVSNVLGTIN-PVKEIGEIAHEAGVPVLVDGAQSAGHMP-VDVQD 189 (373)
T ss_pred EEEEeecCCCCCcCHHHHHHHhc---CCceEEEEeCcccccCCcC-CHHHHHHHHHHcCCEEEEEhhhhcCcee-eeccc
Confidence 99999998889999999999997 689999999985 689998 7999999999999999999986422211 12245
Q ss_pred cCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccC--CC----CCCCC--CCCCCCCCCccchhhHHHH
Q 001531 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVST--GG----IPAPE--KSQPLGTIAAAPWGSALIL 853 (1058)
Q Consensus 782 ~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~--~d----~g~~~--~~~~t~~i~sa~~g~~~~~ 853 (1058)
+|+|++++++||+|+ ++|+|++++++++.+.+.....+.. .. ...+. ..+.. ..+ + +...+
T Consensus 190 ~~~d~~~~s~~K~~~------~~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~t-~--~~~~~ 258 (373)
T cd06453 190 LGCDFLAFSGHKMLG------PTGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFE--AGT-P--NIAGA 258 (373)
T ss_pred cCCCEEEeccccccC------CCCcEEEEEchHHhhcCCCeecCCCccccccccccccCCCccccC--CCC-C--CHHHH
Confidence 799999999999984 3788999999877665543221110 00 00000 00000 011 1 11223
Q ss_pred HHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCC
Q 001531 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 931 (1058)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~--~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~G 931 (1058)
.+.+..+..+..+|++++.++...+++|+.+.|+++ +++.. . .....+.+.|.++ +.+..++.++|.++|
T Consensus 259 ~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~-~~~~~~~~~~~~~------~~~~~~i~~~l~~~g 330 (373)
T cd06453 259 IGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYG-D-AEDRAGVVSFNLE------GIHPHDVATILDQYG 330 (373)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeC-C-ccccCCeEEEEEC------CcCHHHHHHHHHHCC
Confidence 344556677788888888888889999999999875 33331 1 1112234555543 357789999999999
Q ss_pred ccccCCCC---------CCCCEEEEEcCCCCCHHHHHHHHHHH
Q 001531 932 FHGPTMSW---------PVPGTLMIEPTESESKEELDRYCDAL 965 (1058)
Q Consensus 932 i~~~~~~~---------p~~~~Lris~te~~t~eeid~fi~aL 965 (1058)
|.+..... ..++++||+++..+|++|+|+|+++|
T Consensus 331 i~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 331 IAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred EEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 98643221 12578999999999999999999875
No 55
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.89 E-value=7.8e-22 Score=226.28 Aligned_cols=293 Identities=18% Similarity=0.226 Sum_probs=207.4
Q ss_pred hhhcHHHHHHHHHHHHHHHhCCC---ceeeecCchHHHHHHHHHHHHHHHHH----c--CCCCCCEEEEcCCCCCccHHH
Q 001531 626 QAQGYQEMFNNLGEWLCTITGFD---SFSLQPNAGAAGEYAGLMVIRAYHKA----R--GDHHRNVCIIPVSAHGTNPAT 696 (1058)
Q Consensus 626 ~~qG~~~~~~el~~~lael~G~~---~~~l~~~sGa~ge~a~llair~y~~~----~--G~~~r~~Vlip~saHg~~pa~ 696 (1058)
.+++..+++.++.+++++++|.+ ...+.+++|++++..++.+++..... . +.+.+.+|+++...|.++...
T Consensus 32 ~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~ 111 (345)
T cd06450 32 ESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKA 111 (345)
T ss_pred cCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHH
Confidence 36678888999999999999986 22456677777775555554431110 0 011245788899899888888
Q ss_pred HHhCCcEEEEEcCCCCCCCCHHHHHHHHHh---cCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCccc
Q 001531 697 AAMCGMKIVSVGTDAKGNINIEELRKAAEA---NRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNA 772 (1058)
Q Consensus 697 a~~~G~~vv~V~~d~~g~iD~e~L~~~i~~---~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~a 772 (1058)
+...|.+++.+++++++.+|+++|++++++ .+.++.+|++++|+ .+|.++ |+++|+++|+++|+++|+|+++...
T Consensus 112 ~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~-~~~~i~~~~~~~~~~l~vD~a~~~~ 190 (345)
T cd06450 112 AAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAID-PLEEIADLAEKYDLWLHVDAAYGGF 190 (345)
T ss_pred HHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCC-CHHHHHHHHHHhCCeEEEechhhHH
Confidence 888899999999988899999999999973 12278888889885 689998 7999999999999999999997533
Q ss_pred ccCcCCC-----CccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccch
Q 001531 773 QVGLTSP-----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPW 847 (1058)
Q Consensus 773 l~gl~~p-----g~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~ 847 (1058)
....... +..++|++++++||+++.|+ |.|+++++
T Consensus 191 ~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~-----g~g~~~~~----------------------------------- 230 (345)
T cd06450 191 LLPFPEPRHLDFGIERVDSISVDPHKYGLVPL-----GCSAVLVR----------------------------------- 230 (345)
T ss_pred HhhChhhHHHhcCccccCEEEEchhHhhCCCc-----chHHHHHH-----------------------------------
Confidence 2211111 11378999999999986443 33333222
Q ss_pred hhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHH
Q 001531 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL 927 (1058)
Q Consensus 848 g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L 927 (1058)
++..|+.+..++.+|+++..++..++++++.+.|++...+...++ +..+.+.|.+.+- ...+++..++.++|
T Consensus 231 -----~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~~iv~f~~~~~-~~~~~~~~~i~~~L 302 (345)
T cd06450 231 -----ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGE--PNLSLVCFRLKPS-VKLDELNYDLSDRL 302 (345)
T ss_pred -----HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CceeEEEEEECCc-chhhHHHHHHHHHH
Confidence 233567778889999999999999999999999987533221121 1223344554310 00124567899999
Q ss_pred HHCC-ccccCCCCCCCCEEEEEcCCC-CCHHHHHHHHHHHHH
Q 001531 928 MDYG-FHGPTMSWPVPGTLMIEPTES-ESKEELDRYCDALIS 967 (1058)
Q Consensus 928 ~~~G-i~~~~~~~p~~~~Lris~te~-~t~eeid~fi~aL~~ 967 (1058)
.++| ++++...++..+.+|++++.. +|++|+|+|+++|++
T Consensus 303 ~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 303 NERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred HhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 9985 555433333357899999976 499999999999975
No 56
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.89 E-value=1.1e-20 Score=223.42 Aligned_cols=314 Identities=16% Similarity=0.149 Sum_probs=213.3
Q ss_pred HHHHHHHHHHHHHhCCCc-ee-eecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHH----HHHhCCcEEE
Q 001531 632 EMFNNLGEWLCTITGFDS-FS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIV 705 (1058)
Q Consensus 632 ~~~~el~~~lael~G~~~-~~-l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa----~a~~~G~~vv 705 (1058)
+.+.++++.+++++|.+. .. +..++++++. .++++.+... ...++++||++...|.++.. .++..|++++
T Consensus 76 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al---~~i~~~~~~~-~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~ 151 (424)
T PLN02855 76 DAYELARKKVAAFINASTSREIVFTRNATEAI---NLVAYTWGLA-NLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLK 151 (424)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHH---HHHHHHhhhh-cCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEE
Confidence 457789999999999853 33 3344444443 2333322100 11356789999887765422 2567899999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCC
Q 001531 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA 784 (1058)
Q Consensus 706 ~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~Ga 784 (1058)
.++++.++.+|++++++.++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+...+ ...++|+
T Consensus 152 ~v~~~~~~~~~~~~l~~~i~---~~t~lv~i~~~~n~tG~~~-~~~~I~~l~~~~g~~vivD~a~~~g~~~~-~~~~~~~ 226 (424)
T PLN02855 152 FVGLTPDEVLDVEQLKELLS---EKTKLVATHHVSNVLGSIL-PVEDIVHWAHAVGAKVLVDACQSVPHMPV-DVQTLGA 226 (424)
T ss_pred EEecCCCCCcCHHHHHHHhc---cCceEEEEeCccccccccC-CHHHHHHHHHHcCCEEEEEhhhhcCCcCC-CchhcCC
Confidence 99998888899999999996 789999999985 689998 79999999999999999999975433222 2346789
Q ss_pred cEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCC------CCC-----CCCCCCCCCCCCccchhhHHHH
Q 001531 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG------GIP-----APEKSQPLGTIAAAPWGSALIL 853 (1058)
Q Consensus 785 Di~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~------d~g-----~~~~~~~t~~i~sa~~g~~~~~ 853 (1058)
|+++.++||.+ |.+|+|++++++++.+.++....|... +.. ..+.+.+|.++ ..+
T Consensus 227 d~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~--------~~~ 292 (424)
T PLN02855 227 DFLVASSHKMC------GPTGIGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAI--------GEA 292 (424)
T ss_pred CEEEeeccccc------CCCccEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHH--------HHH
Confidence 99999999943 334799999998877776543333211 000 00111122222 112
Q ss_pred HHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCC----ccceEEEEecccccccCCCCHHHHHHHHHH
Q 001531 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNG----TVAHEFIVDLRGLKNTAGIEPEDVAKRLMD 929 (1058)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~----~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~ 929 (1058)
+...+.+..+...|+.++.++....+++++++|+++..+..-++.. ...+.+.|.++ +++..++.+.|.+
T Consensus 293 ~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~------~~~~~~v~~~L~~ 366 (424)
T PLN02855 293 IGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVE------GIHPTDLSTFLDQ 366 (424)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEEC------CcCHHHHHHHhcc
Confidence 2233445555556788888888899999999998753332112211 12233445543 4577899999987
Q ss_pred C-CccccCCCC---------CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001531 930 Y-GFHGPTMSW---------PVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1058)
Q Consensus 930 ~-Gi~~~~~~~---------p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~~ 974 (1058)
+ ||.+..-.+ ...+.+|||++.++|.+|||+|+++|++++...++
T Consensus 367 ~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~~~~ 421 (424)
T PLN02855 367 QHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIAFFSS 421 (424)
T ss_pred cCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 7 998753211 12468999999999999999999999999877665
No 57
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.89 E-value=1.3e-20 Score=220.94 Aligned_cols=312 Identities=15% Similarity=0.140 Sum_probs=210.1
Q ss_pred cHHHHHHHHHHHHHHHhCC-Ccee-eecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccH----HHHHhCCc
Q 001531 629 GYQEMFNNLGEWLCTITGF-DSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGM 702 (1058)
Q Consensus 629 G~~~~~~el~~~lael~G~-~~~~-l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~p----a~a~~~G~ 702 (1058)
...+.+.++++.+++++|. +... +..++++++.. ++++.+.. +...++++||+++..|.++- ..++..|+
T Consensus 60 ~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~---~~~~~~~~-~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~ 135 (401)
T PRK10874 60 RLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESIN---LVAQSYAR-PRLQPGDEIIVSEAEHHANLVPWLMVAQQTGA 135 (401)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHH---HHHHHhhh-ccCCCcCEEEECCcchHHHHHHHHHHHHHhCC
Confidence 3456788999999999999 5433 34455555543 33333311 01135688999988776532 23567899
Q ss_pred EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCc
Q 001531 703 KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY 781 (1058)
Q Consensus 703 ~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~ 781 (1058)
+++.++.+.++.+|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+...+ ...+
T Consensus 136 ~v~~v~~~~~~~~d~~~l~~~i~---~~t~lv~i~~~~n~tG~~~-~~~~i~~l~~~~g~~~ivD~a~~~g~~~~-~~~~ 210 (401)
T PRK10874 136 KVVKLPLGADRLPDVDLLPELIT---PRTRILALGQMSNVTGGCP-DLARAITLAHQAGMVVMVDGAQGAVHFPA-DVQA 210 (401)
T ss_pred EEEEEecCCCCcCCHHHHHHhcC---cCcEEEEEeCCcccccCcC-CHHHHHHHHHHcCCEEEEECCcccccccC-Cchh
Confidence 99999998889999999999996 789999999985 689998 79999999999999999999975322211 2245
Q ss_pred cCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCC----CCC-------CCCCCCCCCCCCccchhhH
Q 001531 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG----GIP-------APEKSQPLGTIAAAPWGSA 850 (1058)
Q Consensus 782 ~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~----d~g-------~~~~~~~t~~i~sa~~g~~ 850 (1058)
+++|++++++||.| |.+|+|++++++++.+.++....+... ++. .++.+.++.++. .
T Consensus 211 ~~~d~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~-----~- 278 (401)
T PRK10874 211 LDIDFYAFSGHKLY------GPTGIGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVA-----G- 278 (401)
T ss_pred cCCCEEEEeccccc------CCCccEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHH-----H-
Confidence 78999999999965 334789999998877666532211100 000 000111222221 1
Q ss_pred HHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHC
Q 001531 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (1058)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~ 930 (1058)
.++..+.+..+...|+.+..++....++++.+.|+++..+...++... ..+.|+++ +.+.+++.+.|.++
T Consensus 279 --~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~--~i~~~~~~------~~~~~~~~~~L~~~ 348 (401)
T PRK10874 279 --VIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSFRCQDS--SLLAFDFA------GVHHSDLVTLLAEY 348 (401)
T ss_pred --HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCC--cEEEEEEC------CcCHHHHHHHHHHC
Confidence 112223334444556666777777888999999987534322121111 12344543 45678999999999
Q ss_pred CccccCCCC---------CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 931 GFHGPTMSW---------PVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 931 Gi~~~~~~~---------p~~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
||.+..... ...+.+||++...+|++|||+|+++|+++++.
T Consensus 349 gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~~~ 398 (401)
T PRK10874 349 GIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRALEL 398 (401)
T ss_pred CcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHHHH
Confidence 998754221 12578999999999999999999999988764
No 58
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.89 E-value=1.4e-21 Score=225.80 Aligned_cols=312 Identities=20% Similarity=0.244 Sum_probs=201.9
Q ss_pred CCCccCCCCCHHHHHHHHHHHhcCccCcCcccccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHH
Q 001531 560 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGE 639 (1058)
Q Consensus 560 ~~p~~~~~~sE~e~~r~~~~l~~~~~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~ 639 (1058)
.+| +++.+.+++++.+++.........++..++|.-+...+ ......-....+.+-+.+.. +.++...+++.++.+
T Consensus 11 ~lp--~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~~~~-~~~i~~~~l~~~~n~n~~~~-~~~P~~~~~E~~vi~ 86 (373)
T PF00282_consen 11 ELP--EEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPGGPS-PASILADLLASALNQNGFTW-EASPAATEIEREVIR 86 (373)
T ss_dssp CHH--SSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT--C-HHHHHHHHHHHHHT-BTTST-TTSHHHHHHHHHHHH
T ss_pred ccc--cCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccCCcc-HHHHHHHHHHhhhccccccc-ccccccccchHHHHH
Confidence 455 45678999999998876555443344445554321111 11111000011222223333 556788899999999
Q ss_pred HHHHHhCCC--------ceeeecCchHHHHHHHHHHHHHHHH----HcCC--CCCCEEEEcCCCCCccHHHHHhCCcEEE
Q 001531 640 WLCTITGFD--------SFSLQPNAGAAGEYAGLMVIRAYHK----ARGD--HHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1058)
Q Consensus 640 ~lael~G~~--------~~~l~~~sGa~ge~a~llair~y~~----~~G~--~~r~~Vlip~saHg~~pa~a~~~G~~vv 705 (1058)
|+++++|++ ...+.+++|+.+++.+++++|.... ..|. .++..|+++..+|-+..+++.++|+.++
T Consensus 87 ~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~ 166 (373)
T PF00282_consen 87 WLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVR 166 (373)
T ss_dssp HHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEE
T ss_pred HHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcceeeeEEE
Confidence 999999999 2356677888888777777775432 2232 1345688899999999999999999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCC---eEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccC--cCCC
Q 001531 706 SVGTDAKGNINIEELRKAAEANRDN---LSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG--LTSP 779 (1058)
Q Consensus 706 ~V~~d~~g~iD~e~L~~~i~~~~~~---taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~g--l~~p 779 (1058)
.||+|++|++|+++|+++|++...+ ..+|+.+..+ .+|.+| ||++|+++|+++++|+|||+|. +| +..|
T Consensus 167 ~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D-~l~~i~~i~~~~~~wlHVDaA~----gg~~~~~~ 241 (373)
T PF00282_consen 167 KIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAID-PLEEIADICEKYNIWLHVDAAY----GGSALLSP 241 (373)
T ss_dssp EE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB--SHHHHHHHHHHCT-EEEEEETT----GGGGGGHC
T ss_pred EecCCcchhhhHHHhhhhhcccccccccceeeeccCCCccccccc-CHHHHhhhccccceeeeecccc----cccccccc
Confidence 9999999999999999999753222 4467778776 489999 8999999999999999999984 33 2222
Q ss_pred -------CccCCcEEEeCCccccccCCCCCCCceeEEEEeCCC--CCCC--CCCCcccC-CCCCCCCCCCCCCCCCccch
Q 001531 780 -------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHL--APFL--PSHPVVST-GGIPAPEKSQPLGTIAAAPW 847 (1058)
Q Consensus 780 -------g~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l--~~~l--pg~~vg~~-~d~g~~~~~~~t~~i~sa~~ 847 (1058)
|-.++|.++.|.||++..|+++ |++.++++. ...+ ....++.. .+.+ .........+..+
T Consensus 242 ~~~~~~~gi~~adSit~d~HK~l~~P~~~-----~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~-~~~~~~~~tl~~S-- 313 (373)
T PF00282_consen 242 EYRHLLFGIERADSITIDPHKWLGVPYGC-----GVLLVRDKSDLRDAFSINADYLGNDDRESD-ESYDYGDYTLQGS-- 313 (373)
T ss_dssp TTGGGGTTGGGESEEEEETTTTTS-SSS------EEEEESSGGGHHGGGEEEETCTT-S-SSS--GGGCEEEGSSSSS--
T ss_pred cccccccccccccccccchhhhhcCCccc-----eeEEeecccchHHHhccChhhhcccccccc-ccccccccccccc--
Confidence 2346899999999999988765 588888632 1111 00011100 0000 0000011122211
Q ss_pred hhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc
Q 001531 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH 889 (1058)
Q Consensus 848 g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~ 889 (1058)
-...++..|+.++.+|.+|+++..++.+++|+|++++|++.
T Consensus 314 -R~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~ 354 (373)
T PF00282_consen 314 -RRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKD 354 (373)
T ss_dssp -GHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred -ccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 23455678999999999999999999999999999999986
No 59
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.88 E-value=7e-21 Score=219.51 Aligned_cols=312 Identities=15% Similarity=0.144 Sum_probs=210.3
Q ss_pred cHHHHHHHHHHHHHHHhCCCc--eeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCcc--HHHHHhCCcEE
Q 001531 629 GYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTN--PATAAMCGMKI 704 (1058)
Q Consensus 629 G~~~~~~el~~~lael~G~~~--~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~--pa~a~~~G~~v 704 (1058)
+..+...++++.+++++|.+. ..+.+++|+++. .++++.+. .++++|+++...|..+ ...+.+.|.++
T Consensus 29 ~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al---~~~~~~~~-----~~g~~vl~~~~~~~~~~~~~~~~~~g~~~ 100 (356)
T cd06451 29 EFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAM---EAALSNLL-----EPGDKVLVGVNGVFGDRWADMAERYGADV 100 (356)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHH---HHHHHHhC-----CCCCEEEEecCCchhHHHHHHHHHhCCCe
Confidence 345678899999999999953 235566666554 33333331 2467888877655543 23467899999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCc-CCCCcc
Q 001531 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYI 782 (1058)
Q Consensus 705 v~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl-~~pg~~ 782 (1058)
+.++.++++.+|++++++++++ .++++|++++|+ .+|.+. |+++|+++||++|+++++|+++. ++.. .....+
T Consensus 101 ~~v~~~~~~~~~~~~l~~~i~~--~~~~~v~i~~~~~~~G~~~-~~~~i~~~a~~~~~~li~D~~~~--~g~~~~~~~~~ 175 (356)
T cd06451 101 DVVEKPWGEAVSPEEIAEALEQ--HDIKAVTLTHNETSTGVLN-PLEGIGALAKKHDALLIVDAVSS--LGGEPFRMDEW 175 (356)
T ss_pred EEeecCCCCCCCHHHHHHHHhc--cCCCEEEEeccCCCccccc-CHHHHHHHHHhcCCEEEEeeehh--ccCcccccccc
Confidence 9999988889999999999972 378899999884 689987 79999999999999999999864 3322 234567
Q ss_pred CCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCC--CCcccCCCC----CCCCCCCCCCCCCccchhhHHHHHHH
Q 001531 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPS--HPVVSTGGI----PAPEKSQPLGTIAAAPWGSALILPIS 856 (1058)
Q Consensus 783 GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg--~~vg~~~d~----g~~~~~~~t~~i~sa~~g~~~~~~~a 856 (1058)
|+|++++++||+|+.| +|+|++++++++.+.+.. ...++..+. +.+....... .+. +...+..+
T Consensus 176 ~~d~~~~s~~K~l~~p-----~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~t~---~~~~~~a~ 245 (356)
T cd06451 176 GVDVAYTGSQKALGAP-----PGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYP--HTP---PVNLLYAL 245 (356)
T ss_pred CccEEEecCchhccCC-----CCcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCC--CCC---hHHHHHHH
Confidence 8999999999999633 468999999876554421 111110000 0000000111 111 11112233
Q ss_pred HHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHC-Cccc
Q 001531 857 YTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY-GFHG 934 (1058)
Q Consensus 857 ~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~-Gi~~ 934 (1058)
.+.+..+..+|+.+..++...+++++.+.|.+. +++..+ +.......+.+.++ .+.+..+++++|.++ ||.+
T Consensus 246 ~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~L~~~~gI~~ 319 (356)
T cd06451 246 REALDLILEEGLENRWARHRRLAKALREGLEALGLKLLAK-PELRSPTVTAVLVP-----EGVDGDEVVRRLMKRYNIEI 319 (356)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccC-cccCCCceEEEECC-----CCCCHHHHHHHHHHhCCEEE
Confidence 445566666788888888889999999999875 444321 11111111234433 245788999999998 9986
Q ss_pred cCCCCC-CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001531 935 PTMSWP-VPGTLMIEPTESESKEELDRYCDALISIR 969 (1058)
Q Consensus 935 ~~~~~p-~~~~Lris~te~~t~eeid~fi~aL~~i~ 969 (1058)
.....+ .++.+|++++..+|++||++|+++|++++
T Consensus 320 ~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 320 AGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEAL 355 (356)
T ss_pred ecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 532222 35799999999999999999999998865
No 60
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.88 E-value=3.2e-20 Score=217.90 Aligned_cols=288 Identities=15% Similarity=0.131 Sum_probs=208.8
Q ss_pred HHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhcc-ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc
Q 001531 210 LESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI-QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 288 (1058)
Q Consensus 210 l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~-~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~ 288 (1058)
.+.+.++++.+++++|.++.++.+..|+|.+++.++.++.. ..+++++|+++...|+++...++.. +..|++++.++.
T Consensus 46 ~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~-~~~g~~v~~v~~ 124 (402)
T TIGR02006 46 EEAVENARNQVAELIGADSREIVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYL-EREGFEVTYLPP 124 (402)
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHH-HhcCCEEEEEcc
Confidence 46788889999999999888888889999888877655421 1137899999999999999988653 456899888764
Q ss_pred --------hhhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCC-CCCcccceEEEecCc
Q 001531 289 --------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQ 357 (1058)
Q Consensus 289 --------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~-~p~~~GaDivvgs~k 357 (1058)
+++++ +++++++|+++++ |.+|.+.|+++|+++||++|++++||+ .++.|... +..++|+|+++++++
T Consensus 125 ~~~~~~d~~~l~~~l~~~~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~-a~a~g~~~~~~~~~~~D~~~~s~~ 203 (402)
T TIGR02006 125 KSNGLIDLEELKAAIRDDTILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDA-AQSVGKIPINVNELKVDLMSISGH 203 (402)
T ss_pred CCCCcCCHHHHHHhcCCCCEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEc-chhcCCcccCccccCCCEEEEehh
Confidence 34555 6778999999987 689999999999999999999999943 45666543 456789999999995
Q ss_pred ccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHH
Q 001531 358 RFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY 437 (1058)
Q Consensus 358 ~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~ 437 (1058)
++.+| +|.|+++++++....+.+.+.| |.. ..+.+.||.|+ ..+.++.+++ .+
T Consensus 204 K~~gp-----~G~G~l~~~~~~~~~~~~~~~g------~~~-----------~~~~~~gt~~~---~~~~al~~al--~~ 256 (402)
T TIGR02006 204 KIYGP-----KGIGALYVRRKPRVRLEALIHG------GGH-----------ERGMRSGTLPT---HQIVGMGEAF--RI 256 (402)
T ss_pred hhcCC-----CceEEEEEccCCCCCCCceecC------CCc-----------cCCccCCCccH---HHHHHHHHHH--HH
Confidence 45333 4689999998765555443332 111 01235688888 4555666665 23
Q ss_pred hCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCc-c--EEEEecCCHHHHHHHHHHcCceeee-----------
Q 001531 438 HGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFF-D--TVKVKCADAHAIASAAYKIEMNLRV----------- 501 (1058)
Q Consensus 438 ~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~--~~~-~--~v~i~~~~~~~l~~~L~~~GI~~~~----------- 501 (1058)
+ .++++++.++..++.++++++|+++.++++.++ ... . .|+|......++...| +||.++.
T Consensus 257 ~-~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~~~~~~~~~~l--~~i~v~~G~~c~~~~~~~ 333 (402)
T TIGR02006 257 A-KEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNYVEGESLIMAL--KDLAVSSGSACTSASLEP 333 (402)
T ss_pred H-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEeCcCHHHHHHhc--CCEEEechhhcCCCCCCc
Confidence 2 347888999999999999999998755877642 112 1 2444422255666665 3554321
Q ss_pred ------------ccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 502 ------------VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 502 ------------~~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
...+.||+|++.+||++|+|+++++|..
T Consensus 334 ~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~ 373 (402)
T TIGR02006 334 SYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKS 373 (402)
T ss_pred cHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 0137899999999999999999999964
No 61
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.88 E-value=1.5e-20 Score=220.11 Aligned_cols=311 Identities=18% Similarity=0.199 Sum_probs=205.4
Q ss_pred hhcHHHHHHHHHHHHHHHhCCCceeee-cCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccH----HHHHhCC
Q 001531 627 AQGYQEMFNNLGEWLCTITGFDSFSLQ-PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCG 701 (1058)
Q Consensus 627 ~qG~~~~~~el~~~lael~G~~~~~l~-~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~p----a~a~~~G 701 (1058)
+++..+.+.++++.+++++|.+...+. .++++++. .++++.+.. ..+++++||++...|.++. ..++..|
T Consensus 55 ~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l---~~~~~~~~~--~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g 129 (397)
T TIGR01976 55 SRRADQVVDDAREAVADLLNADPPEVVFGANATSLT---FLLSRAISR--RWGPGDEVIVTRLDHEANISPWLQAAERAG 129 (397)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHH---HHHHHHHHh--cCCCCCEEEEcCCchHhHHHHHHHHHHhcC
Confidence 345667788999999999998754333 33444333 222232211 0135688999888786653 2356789
Q ss_pred cEEEEEcCCC-CCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCC
Q 001531 702 MKIVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP 779 (1058)
Q Consensus 702 ~~vv~V~~d~-~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~p 779 (1058)
++++.++.++ ++.+|+++++++++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+.. ....
T Consensus 130 ~~~~~~~~~~~~~~~~~~~l~~~i~---~~~~lv~i~~~~n~tG~~~-~~~~i~~~~~~~~~~~ivD~a~~~~~~-~~~~ 204 (397)
T TIGR01976 130 AKVKWARVDEATGELHPDDLASLLS---PRTRLVAVTAASNTLGSIV-DLAAITELVHAAGALVVVDAVHYAPHG-LIDV 204 (397)
T ss_pred CEEEEEeccccCCCcCHHHHHHhcC---CCceEEEEeCCCCCCCccC-CHHHHHHHHHHcCCEEEEehhhhcccc-CCCH
Confidence 9999999886 68999999999996 789999999995 689998 799999999999999999999753222 1223
Q ss_pred CccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHH
Q 001531 780 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 859 (1058)
Q Consensus 780 g~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~ 859 (1058)
.++|+|++++++||+| ||++|++++++++.+.+..............+.+.++.++ +....+..|..+
T Consensus 205 ~~~~~d~~~~s~~K~~-------g~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~-----~~~~~l~~al~~ 272 (397)
T TIGR01976 205 QATGADFLTCSAYKFF-------GPHMGILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQY-----ELLAGVVAAVDY 272 (397)
T ss_pred HHcCCCEEEEechhhc-------CCceEEEEEcHHHHhhCCCccccCccCCCcchhcCCCCCH-----HHHHHHHHHHHH
Confidence 4679999999999987 3668999999876655532211110000000112222221 222333344555
Q ss_pred HHHHchh-----------hHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCccceEEEEecccccccCCCCHHHHHHH
Q 001531 860 IAMMGSK-----------GLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR 926 (1058)
Q Consensus 860 l~~lG~e-----------Gl~~~a~~~~~~a~yL~~~L~~~--~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~ 926 (1058)
+...|.+ ++++..++..+.++++.++|+++ +++..+.......+.+.+.+. +.+..++.++
T Consensus 273 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~ 346 (397)
T TIGR01976 273 LAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVH------GLPPQRVVRR 346 (397)
T ss_pred HHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeC------CcCHHHHHHH
Confidence 5555521 35566677778889999999874 333211000112333444433 3567899999
Q ss_pred HHHCCccccCCC-C----------C-CCCEEEEEcCCCCCHHHHHHHHHHH
Q 001531 927 LMDYGFHGPTMS-W----------P-VPGTLMIEPTESESKEELDRYCDAL 965 (1058)
Q Consensus 927 L~~~Gi~~~~~~-~----------p-~~~~Lris~te~~t~eeid~fi~aL 965 (1058)
|.++||.+.... + + ..+.+||+++..+|++|+|+|+++|
T Consensus 347 L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 347 LADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred HHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 999999986431 1 1 1368999999999999999999875
No 62
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.88 E-value=2.3e-20 Score=217.51 Aligned_cols=288 Identities=17% Similarity=0.136 Sum_probs=208.2
Q ss_pred HHHHHHHHHHHHHhcCC-CCcceEeecchHHHHHHHHHHhcc---ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 001531 210 LESLLNFQTMIADLTGL-PMSNASLLDEGTAAAEAMAMCNNI---QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (1058)
Q Consensus 210 l~~l~e~q~~ia~L~G~-~~anasl~~~~Taa~ea~~~a~~~---~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~ 285 (1058)
.+.+.+....+++.+|. ++.++.++.|+|.++..++.++.+ .+.++++|+++..+||++...+.. ++..|++++.
T Consensus 41 ~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~-~~~~G~~v~~ 119 (382)
T TIGR03403 41 HPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAF-LESLGVEVTY 119 (382)
T ss_pred HHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHH-HHHCCCEEEE
Confidence 44566666677777776 567888889988776665554311 112357899999999999998864 4567999988
Q ss_pred eCc--------hhhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCC-CCCCcccceEEEe
Q 001531 286 SDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVG 354 (1058)
Q Consensus 286 v~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l-~~p~~~GaDivvg 354 (1058)
++. +++++ +++++++|++++| |.+|.+.|+++|.++||++|++++||+ .+++|.. .+..++|+|+++.
T Consensus 120 v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~-a~~~g~~~~~~~~~~~D~~~~ 198 (382)
T TIGR03403 120 LPINEQGTITAEQVREAITEKTALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDA-VQAIGKIPVDVQKAGVDFLSF 198 (382)
T ss_pred EecCCCCCCCHHHHHHhcccCCeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEec-hhhcCCCccCccccCCCEEEE
Confidence 765 34555 6778999999886 789999999999999999999999943 3455543 2456799999999
Q ss_pred cCcccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHH
Q 001531 355 SAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 434 (1058)
Q Consensus 355 s~k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~y 434 (1058)
++++|. |.||.|++++++++ .+.+.+.|. .. ..+++.+|.|+ .+++++.+++
T Consensus 199 s~~K~~-----gp~G~g~l~vr~~~--~~~p~~~g~------~~-----------~~~~~~gt~~~---~~~~al~~al- 250 (382)
T TIGR03403 199 SAHKFH-----GPKGVGGLYIRKGV--ELTPLFHGG------EH-----------MGGRRSGTLNV---PYIVAMGEAM- 250 (382)
T ss_pred cchhhC-----CCCceEEEEECCCC--CCCCcccCC------CC-----------CCCcccCCcCh---HHHHHHHHHH-
Confidence 995463 33568999999875 233333331 10 01134588887 4555666665
Q ss_pred HHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCC--C-ccEEEEecCC--HHHHHHHHHHcCceeee--------
Q 001531 435 AVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP--F-FDTVKVKCAD--AHAIASAAYKIEMNLRV-------- 501 (1058)
Q Consensus 435 l~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~--~-~~~v~i~~~~--~~~l~~~L~~~GI~~~~-------- 501 (1058)
.++ .++++.+.+++..+.++|.++|+++++++++++. . .+.+.+.+++ +.++.+.|.++||.++.
T Consensus 251 -~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~ 328 (382)
T TIGR03403 251 -RLA-NEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKGVEGEAMLWDLNKAGIAASTGSACASED 328 (382)
T ss_pred -HHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCCCHHHHHHhhccCCEEEEchhccCCCC
Confidence 222 3357888899999999999999988659887531 1 2244555554 77888889999998863
Q ss_pred ---------c------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 502 ---------V------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 502 ---------~------~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
+ ..+.+|+|++.+||++|||+++++|+.
T Consensus 329 ~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~ 371 (382)
T TIGR03403 329 LEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKK 371 (382)
T ss_pred CCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHH
Confidence 0 125799999999999999999999963
No 63
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.88 E-value=1.4e-20 Score=237.65 Aligned_cols=351 Identities=15% Similarity=0.139 Sum_probs=234.4
Q ss_pred HHHHHhcCCcccccccCCCCCCCCChHHHHHHHHhC-CCcccccCCCh-hHHhhHHHHHHHHHHHHHHHhcCCCCcc--e
Q 001531 156 HMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMEN-PAWYTQYTPYQ-AEIAQGRLESLLNFQTMIADLTGLPMSN--A 231 (1058)
Q Consensus 156 ~~~~la~~n~~~~~~lG~g~~~~~~p~~i~~~i~~~-~~~~t~ytpyq-~e~sqG~l~~l~e~q~~ia~L~G~~~an--a 231 (1058)
++..+ ++..|.++-|.+.++ |.++.+.+... ...+. .|.. ...++-..+.+.+.++.+|+++|++..+ +
T Consensus 28 ~fp~l--~~~iYLD~Aatt~~~---~~~V~~~~~~~~~~~~~--np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~V 100 (805)
T PLN02724 28 EFARL--KGVVYLDHAGATLYS---ESQLEAALADFSSNVYG--NPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYAC 100 (805)
T ss_pred Hhhhc--CCCEeEeCCCCCCCC---HHHHHHHHHHHHhhccC--CCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEE
Confidence 45555 345677777777532 33443222110 01111 1211 1245556778999999999999997654 5
Q ss_pred EeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch------------------hhhc
Q 001531 232 SLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK------------------DIDY 293 (1058)
Q Consensus 232 sl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~------------------~l~~ 293 (1058)
.++.++|.++..+..++.+ ++|++||++..+|++++. |+.+++..|+++++++++ +++.
T Consensus 101 vFtsnaT~alnlva~~l~~--~~gd~Iv~t~~eH~svl~-~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~ 177 (805)
T PLN02724 101 VFTSGATAALKLVGETFPW--SSESHFCYTLENHNSVLG-IREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQR 177 (805)
T ss_pred EEeCChHHHHHHHHHHCCC--CCCCeEEEeeccccchHH-HHHHHHHcCCeEEeccchhccccccccccccccchhhhhh
Confidence 6778888877766655544 378999999999999885 556667789999887653 1221
Q ss_pred -c----------CCCEeEEEEEc-CCCceeeccHHHHHHHHHhc-------C-cEEEEEeccccccCCC-CCCcccceEE
Q 001531 294 -K----------SGDVCGVLVQY-PGTEGEVLDYGDFIKNAHAN-------G-VKVVMATDLLALTILK-PPGELGADIV 352 (1058)
Q Consensus 294 -l----------~~~t~~V~v~~-pn~~G~i~dl~~I~~~a~~~-------g-alliV~a~~~slg~l~-~p~~~GaDiv 352 (1058)
+ ++.|++|++++ +|.+|.+.|+++|.++++.. | ++++|++ ..++|.+. +..++|+|++
T Consensus 178 ~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDa-aQ~~g~~piDv~~~~~Dfl 256 (805)
T PLN02724 178 RNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDA-AKGCGTSPPDLSRYPADFV 256 (805)
T ss_pred hhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeeh-hhhcCCCCCChhhcCCCEE
Confidence 1 13567888887 68999999999775555432 3 4677843 33555443 4578999999
Q ss_pred EecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEee-eecCC-CCcceeeecccccccccccccCCCccchhHHHHH
Q 001531 353 VGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGV-SIDSS-GKPALRVAMQTREQHIRRDKATSNICTAQALLAN 429 (1058)
Q Consensus 353 vgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~-s~d~~-g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~ 429 (1058)
++|+ |.||+|. |+|+|++++++.+.|.+.++|. +.+.. ....|.. ...+.+.|+|.||.|+ .++.++
T Consensus 257 ~~S~HK~~GgP~-----G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~--~~~~~~~rfE~GT~n~---~~i~~l 326 (805)
T PLN02724 257 VVSFYKIFGYPT-----GLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVK--RRERVEQRFEDGTISF---LSIAAL 326 (805)
T ss_pred EEecceeccCCC-----CceEEEEehhhhhhhcCCccCCCceEEEecccceee--ccccHHHHhcCCCcch---hHHHHH
Confidence 9999 5443342 5789999999888888777774 22100 0001111 1112345789999999 566677
Q ss_pred HHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCC------CeEEcCCC--------CccEEEEecCC-------HHHH
Q 001531 430 MAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG------TVEVQGLP--------FFDTVKVKCAD-------AHAI 488 (1058)
Q Consensus 430 ~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G------~~~l~~~~--------~~~~v~i~~~~-------~~~l 488 (1058)
.+++ .++...|+++|.+++..++++|.++|+++. ++++++.. ...+|+|++.+ ..++
T Consensus 327 ~aal--~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v 404 (805)
T PLN02724 327 RHGF--KLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREV 404 (805)
T ss_pred HHHH--HHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHH
Confidence 7776 566666899999999999999999999873 37787532 23466666543 3445
Q ss_pred HHHHHHcCceeee------------c---------------------------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 489 ASAAYKIEMNLRV------------V---------------------------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 489 ~~~L~~~GI~~~~------------~---------------------------~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
.+.+.++||.++. + ..+.+|+|++.+||.+|||+|+++|..
T Consensus 405 ~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~ 484 (805)
T PLN02724 405 EKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIIS 484 (805)
T ss_pred HHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHH
Confidence 5555677997632 0 127899999999999999999999964
No 64
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.88 E-value=1.6e-20 Score=212.49 Aligned_cols=325 Identities=18% Similarity=0.233 Sum_probs=237.6
Q ss_pred ccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCcc-eEeecchHHHHHHHHHHh
Q 001531 170 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSN-ASLLDEGTAAAEAMAMCN 248 (1058)
Q Consensus 170 ~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~an-asl~~~~Taa~ea~~~a~ 248 (1058)
.+..| |..+|+.|.+.+. ++- ....+ ++ -.+.+.+.++.+-.+++.+-.. +.+..+||+++||++.++
T Consensus 8 Ll~PG--P~~v~~~V~~am~-~~~-~~h~s---~~----F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl 76 (383)
T COG0075 8 LLTPG--PVPVPPRVLLAMA-RPM-VGHRS---PD----FVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASL 76 (383)
T ss_pred eeeCC--CCCCCHHHHHHhc-CCC-CCCCC---HH----HHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhc
Confidence 45666 6778888875444 332 22222 23 2345556667888889987433 445588999999998776
Q ss_pred ccccCCCCEEEEc-CCCCHHHHHHHHHhhcCCCeEEEEeC--------chhhhc-cC--CCEeEEEEEcC-CCceeeccH
Q 001531 249 NIQKGKKKTFIIA-SNCHPQTIDICITRADGFDIKVVVSD--------LKDIDY-KS--GDVCGVLVQYP-GTEGEVLDY 315 (1058)
Q Consensus 249 ~~~~~~gd~Vlv~-~~~Hps~~~~~~~~a~~~gi~v~~v~--------~~~l~~-l~--~~t~~V~v~~p-n~~G~i~dl 315 (1058)
- .+||+||+. .+.|.....-+ ++.+|.+++.++ ++++++ |+ ++.++|.++|. +++|.++|+
T Consensus 77 ~---~pgdkVLv~~nG~FG~R~~~i---a~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl 150 (383)
T COG0075 77 V---EPGDKVLVVVNGKFGERFAEI---AERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPL 150 (383)
T ss_pred c---CCCCeEEEEeCChHHHHHHHH---HHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcH
Confidence 3 378887755 57887655544 556787777754 356666 54 67888888775 899999999
Q ss_pred HHHHHHHHhcCcEEEEEeccccccCC-CCCCcccceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeec
Q 001531 316 GDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSID 393 (1058)
Q Consensus 316 ~~I~~~a~~~galliV~a~~~slg~l-~~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d 393 (1058)
++|+++++++|++++||+ ..|+|.. ..+.+||+|++++++ |.|+.| ||+|+++++++.++.+..+
T Consensus 151 ~~I~~~~k~~g~l~iVDa-VsS~Gg~~~~vd~wgiDv~itgSQK~l~~P-----PGla~v~~S~~a~e~~~~~------- 217 (383)
T COG0075 151 KEIAKAAKEHGALLIVDA-VSSLGGEPLKVDEWGIDVAITGSQKALGAP-----PGLAFVAVSERALEAIEER------- 217 (383)
T ss_pred HHHHHHHHHcCCEEEEEe-cccCCCcccchhhcCccEEEecCchhccCC-----CccceeEECHHHHHHHhcC-------
Confidence 999999999999999965 4577765 367899999999999 778776 8899999999988877422
Q ss_pred CCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC-
Q 001531 394 SSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL- 472 (1058)
Q Consensus 394 ~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~- 472 (1058)
-.++|+++|....+...+...++.....+.++|+..++ ..+..+|++++.+|++.++++++++++++| ++++.+
T Consensus 218 --~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al--~~i~~EGle~r~~RH~~~~~a~r~~~~alG-l~~~~~~ 292 (383)
T COG0075 218 --KHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREAL--DLILEEGLEARIARHRRLAEALRAGLEALG-LELFADP 292 (383)
T ss_pred --CCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH--HHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CccccCc
Confidence 12268999865545444434566666668888988887 677789999999999999999999999999 998852
Q ss_pred -CCccEEE-EecCC---HHHHHHHHH-HcCceeee----ccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 473 -PFFDTVK-VKCAD---AHAIASAAY-KIEMNLRV----VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 473 -~~~~~v~-i~~~~---~~~l~~~L~-~~GI~~~~----~~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
...++++ +..+. ..++...+. ++||.+.. +.+..+||..+-.-+.+|+...+.+|+.
T Consensus 293 ~~~s~tvta~~~P~g~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~ 359 (383)
T COG0075 293 ERRSPTVTAIKVPEGVDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEA 359 (383)
T ss_pred ccCCCceEEEECCCCCCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHH
Confidence 2233443 45554 334444555 45887743 3356899999889999999999999864
No 65
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.88 E-value=4.7e-20 Score=214.65 Aligned_cols=309 Identities=17% Similarity=0.205 Sum_probs=203.4
Q ss_pred HHHHHHHHHHHHHHHhCCCcee-eecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHH---HHhCCcEEE
Q 001531 630 YQEMFNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCGMKIV 705 (1058)
Q Consensus 630 ~~~~~~el~~~lael~G~~~~~-l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~---a~~~G~~vv 705 (1058)
..+.+.++++++++++|.+... +..++|++|...++.++..+ . .++++|+++...|.++... ++..|++++
T Consensus 40 ~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~--~---~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~ 114 (379)
T TIGR03402 40 VGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAA--Q---PEKRHIITTAVEHPAVLSLCQHLEKQGYKVT 114 (379)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHh--c---CCCCeEEEcccccHHHHHHHHHHHHcCCEEE
Confidence 4566889999999999988643 44455665554444333211 1 1346788888777655433 334799999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCC
Q 001531 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA 784 (1058)
Q Consensus 706 ~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~Ga 784 (1058)
.++.+++|.+|+++++++++ +++++++++++ |.+|.+. |+++|+++||++|+++++|+++..+...+ ...++|+
T Consensus 115 ~v~~~~~g~~~~~~l~~~i~---~~~~lv~i~~~~n~tG~~~-~~~~I~~l~~~~g~~vivD~~~~~g~~~~-~~~~~~~ 189 (379)
T TIGR03402 115 YLPVDEEGRLDLEELRAAIT---DDTALVSVMWANNETGTIF-PIEEIGEIAKERGALFHTDAVQAVGKIPI-DLKEMNI 189 (379)
T ss_pred EEccCCCCcCCHHHHHHhcC---CCcEEEEEEcccCCeeecc-cHHHHHHHHHHcCCEEEEECccccccccc-CcccCCC
Confidence 99998889999999999996 78899999988 4689998 79999999999999999999975332211 2345799
Q ss_pred cEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHc
Q 001531 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1058)
Q Consensus 785 Di~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1058)
|++++++|| +. |.+|+|++++++... .-| ...|.. .....+.++.++.. . ..+..+ +..+
T Consensus 190 D~~~~s~~K-~~-----gp~G~g~l~v~~~~~-~~p-~~~g~~---~~~~~~~gt~~~~~----~-~~l~~a---l~~~- 249 (379)
T TIGR03402 190 DMLSLSGHK-LH-----GPKGVGALYIRKGTR-FRP-LLRGGH---QERGRRAGTENVPG----I-VGLGKA---AELA- 249 (379)
T ss_pred CEEEEcHHH-cC-----CCCceEEEEECCCCC-CCC-cccCCc---cCCCcCCCCccHHH----H-HHHHHH---HHHH-
Confidence 999999999 52 334799999987642 112 111110 00111222222221 1 111122 2222
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhc-cCCeeeccCCC-ccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCC----
Q 001531 865 SKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNG-TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS---- 938 (1058)
Q Consensus 865 ~eGl~~~a~~~~~~a~yL~~~L~~-~~~v~~~g~~~-~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~---- 938 (1058)
.+++.+..++...+++++.++|++ +..+...++.. ...+.+.+.++ +.+..++.+.|.++||.+..-.
T Consensus 250 ~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~gI~v~~g~~c~~ 323 (379)
T TIGR03402 250 TEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFE------YIEGEAILLLLDMEGICASSGSACTS 323 (379)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEec------CCCHHHHHHhhccCCEEEEchhhcCC
Confidence 334566666777888899999875 43332223211 11122334333 4577899999999999864211
Q ss_pred -------------CC---CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001531 939 -------------WP---VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1058)
Q Consensus 939 -------------~p---~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~~ 974 (1058)
.+ .++.+|+|+...+|++|||+++++|++++++.++
T Consensus 324 ~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~~ 375 (379)
T TIGR03402 324 GSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLRA 375 (379)
T ss_pred CCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 00 1378999999999999999999999998877553
No 66
>PRK02948 cysteine desulfurase; Provisional
Probab=99.88 E-value=3.9e-20 Score=215.49 Aligned_cols=291 Identities=13% Similarity=0.087 Sum_probs=209.4
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccc-cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 001531 206 AQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ-KGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1058)
Q Consensus 206 sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~-~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~ 284 (1058)
.....+.+.++++.+|+++|.++.++.+..|+|.++..++.++... .+++++|+++..+||++...++. ++..|++++
T Consensus 38 ~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~-~~~~g~~v~ 116 (381)
T PRK02948 38 GGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQS-LESQGYTVT 116 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHH-HHhCCCEEE
Confidence 3344567888999999999998888888888898877665544210 12689999999999999998865 455788888
Q ss_pred EeCc--------hhhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCC-CCCcccceEEE
Q 001531 285 VSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVV 353 (1058)
Q Consensus 285 ~v~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~-~p~~~GaDivv 353 (1058)
.++. +++++ +++++++|++++| |.+|.+.|+++|+++||++|++++|| ..+++|... ...++|+|+++
T Consensus 117 ~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD-~~~~~g~~~~~~~~~~~d~~~ 195 (381)
T PRK02948 117 EIPVDKSGLIRLVDLERAITPDTVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSD-CVQTFGKLPIDVFEMGIDSLS 195 (381)
T ss_pred EEeeCCCCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEE-ChhhccccccCcccCCCCEEE
Confidence 8764 34555 6778899999998 68999999999999999999999995 355666432 34678999999
Q ss_pred ecCcccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHH
Q 001531 354 GSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1058)
Q Consensus 354 gs~k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~ 433 (1058)
.+++++. |.||+|++++++++. +.....| + . +..+.+.+|.|+ .+..++.+++
T Consensus 196 ~s~~K~~-----gp~G~G~l~~~~~~~--~~~~~~~------~-------~----~~~~~~~~t~~~---~~~~a~~~al 248 (381)
T PRK02948 196 VSAHKIY-----GPKGVGAVYINPQVR--WKPVFPG------T-------T----HEKGFRPGTVNV---PGIAAFLTAA 248 (381)
T ss_pred ecHHhcC-----CCCcEEEEEEcCCCC--CCCcccC------C-------C----CCCCcCCCCccH---HHHHHHHHHH
Confidence 9984343 334689999987641 1110000 0 0 112235677777 4455555555
Q ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEc--C-CC-Cc-cEEEEecCC--HHHHHHHHHHcCceeeecc---
Q 001531 434 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ--G-LP-FF-DTVKVKCAD--AHAIASAAYKIEMNLRVVD--- 503 (1058)
Q Consensus 434 yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~--~-~~-~~-~~v~i~~~~--~~~l~~~L~~~GI~~~~~~--- 503 (1058)
.++ .++++++.+++.++.++++++|+++| +++. + .. .. ..+.+..++ +.++...|.++||.++...
T Consensus 249 --~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~-~~v~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~ 324 (381)
T PRK02948 249 --ENI-LKNMQEESLRFKELRSYFLEQIQTLP-LPIEVEGHSTSCLPHIIGVTIKGIEGQYTMLECNRRGIAISTGSACQ 324 (381)
T ss_pred --HHH-HHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEeCCCccCcCCEEEEEeCCCCHHHHHHhcccCCEEEEchHhcC
Confidence 222 23678889999999999999999987 6544 2 11 12 234455454 6778888988999886310
Q ss_pred --------------------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 504 --------------------SNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 504 --------------------~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
.+.+|+|++.+||++|+++++++|..
T Consensus 325 ~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~ 370 (381)
T PRK02948 325 VGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALET 370 (381)
T ss_pred CCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHH
Confidence 36899999999999999999999964
No 67
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.88 E-value=5.2e-20 Score=213.58 Aligned_cols=340 Identities=15% Similarity=0.191 Sum_probs=223.1
Q ss_pred CHHHHHHHHHHHhcCCccc---ccccCCCCCCCCChHHHH--HHHH-hCCCcccccCCChhHHhhHHHHHHHHHHHHHHH
Q 001531 149 TESQMIEHMQKLASMNKVY---KSFIGMGYYNTHVPPVIL--RNIM-ENPAWYTQYTPYQAEIAQGRLESLLNFQTMIAD 222 (1058)
Q Consensus 149 sE~e~~~~~~~la~~n~~~---~~~lG~g~~~~~~p~~i~--~~i~-~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~ 222 (1058)
||.|+++.++++-+....+ ..++..+..| .|.+.. ...+ .+.+ .+....|..+.+.++++.+|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~a~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~la~ 70 (373)
T TIGR03812 1 SEEEVLEELKEYRSEDLKYSDGRILGSMCTNP--HPIAVKAYDMFIETNLG--------DPGLFPGTKKIEEEVVGSLGN 70 (373)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCcEEEEEeCCc--hHHHHHHHHHHhhcCCC--------CcccCccHHHHHHHHHHHHHH
Confidence 6899999999985554433 2234444433 333221 1111 1111 011123455667788899999
Q ss_pred hcCCCCcceEeecchHHHHHHHHHHhcc--c-cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhh
Q 001531 223 LTGLPMSNASLLDEGTAAAEAMAMCNNI--Q-KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDI 291 (1058)
Q Consensus 223 L~G~~~anasl~~~~Taa~ea~~~a~~~--~-~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~--------~~l 291 (1058)
++|++..++.++.++|.++..++.++.. . .+++++|++++..|+++...++ ..|++++.++. +++
T Consensus 71 ~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~----~~G~~~~~v~~~~~~~~d~~~l 146 (373)
T TIGR03812 71 LLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAE----MLGLELRYAPLDEDYTVDVKDV 146 (373)
T ss_pred HhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHH----HcCCeEEEEeeCCCCCcCHHHH
Confidence 9999888888899988776665544321 1 1256899999999999777653 45888877654 345
Q ss_pred hc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCC-------C----CCCcccceEEEecCcc
Q 001531 292 DY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-------K----PPGELGADIVVGSAQR 358 (1058)
Q Consensus 292 ~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l-------~----~p~~~GaDivvgs~k~ 358 (1058)
++ +++++.++++..| |.+|.+.|+++|+++||++|++++||. .++.+.+ . .....|+|.+..++++
T Consensus 147 ~~~l~~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~-a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K 225 (373)
T TIGR03812 147 EDLIDDNTIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDA-AFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHK 225 (373)
T ss_pred HHHHhhCcEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEc-CchhHHHHHHhcCCCCCCccccCCCCCEEEECccc
Confidence 55 6666655554444 689999999999999999999999943 3332211 0 1112489999888855
Q ss_pred cccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHh
Q 001531 359 FGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYH 438 (1058)
Q Consensus 359 lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~ 438 (1058)
|+.+ +.|..|+++.++++++.+... .+ |.. ...+. ...||.|. ....++.++ +.++
T Consensus 226 ~~~~---~~~~G~~~~~~~~~~~~l~~~----------~~-~~~-~~~~~----~~~gt~~~---~~~~~~~~~--l~~l 281 (373)
T TIGR03812 226 MGLS---PIPAGGILFRSKSYLKYLSVD----------AP-YLT-VKKQA----TITGTRSG---ASAAATYAV--IKYL 281 (373)
T ss_pred cCCC---cCCceEEEEeCHHHHhhhccc----------Cc-ccC-CCCCc----ceEeechh---HHHHHHHHH--HHHh
Confidence 6431 123346776777777665210 00 100 00000 01234443 223333333 4778
Q ss_pred CcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCCHHHHHHHHHHcCceeeec-cCCeEEEEeccCCCH
Q 001531 439 GPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVV-DSNTVTASFDETTTL 517 (1058)
Q Consensus 439 g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~~~~l~~~L~~~GI~~~~~-~~~~lris~~~~~t~ 517 (1058)
+++|++++.+++.+++++|+++|+++| ++.+..+..+.+.+..++..++.++|.++||.++.. .+..+|+|++.++|+
T Consensus 282 ~~~g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~v~~~~~~~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~ 360 (373)
T TIGR03812 282 GREGYRKIVAECMENTRYLVEELKKIG-FEPVIEPVLNIVAFEVDDPEEVRKKLRDRGWYVSVTRCPKALRIVVMPHVTR 360 (373)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEcCCCceEEEEEeCCHHHHHHHHHHCCceeccCCCCCEEEEEEECCCCH
Confidence 899999999999999999999999997 654433444556676666678999999999998765 357899999999999
Q ss_pred HHHHHHHHHHh
Q 001531 518 EDVDKLFIVFA 528 (1058)
Q Consensus 518 edid~ll~al~ 528 (1058)
+|+++++++|.
T Consensus 361 edid~l~~~L~ 371 (373)
T TIGR03812 361 EHIEEFLEDLK 371 (373)
T ss_pred HHHHHHHHHHh
Confidence 99999999985
No 68
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.87 E-value=1e-19 Score=217.60 Aligned_cols=377 Identities=16% Similarity=0.173 Sum_probs=233.5
Q ss_pred CCCccCCCCCHHHHHHHHHHHhcCccCcCcccccccccccCCcccc---cccccccccccccCCCCchhhhhcHHHHHHH
Q 001531 560 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATT---EMMPVTWPSFANIHPFAPADQAQGYQEMFNN 636 (1058)
Q Consensus 560 ~~p~~~~~~sE~e~~r~~~~l~~~~~~~~~~~i~lGs~t~~~~~~~---~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~e 636 (1058)
.+| +.+.+..++++.+.+.-..+.....+..++|+-+.-++... ..+.. ..+-+.+.. +.++...+++.+
T Consensus 61 ~~p--~~~~~~~~~~~~~~~~~~~~~~~~~hP~f~g~~~~~~p~~~~~l~~l~~----~lN~n~~~~-~~spa~t~lE~~ 133 (522)
T TIGR03799 61 EIP--EQPTFVSEHTQFLLDKLVAHSVHTASPSFIGHMTSALPYFMLPLSKLMV----ALNQNLVKI-ETSKAFTPLERQ 133 (522)
T ss_pred CCC--CCCCChHHHHHHHHHHHHcCCCCCCCCCeEEeccCCCchHHHHHHHHHH----HhcCCccee-ecCcchHHHHHH
Confidence 456 46677888888866544333222334556665332222221 11111 111122222 567778889999
Q ss_pred HHHHHHHHhCC------------C--ceeeecCchHHHHHHHHHHHHHHHHHc-----CC-------------CCCCEEE
Q 001531 637 LGEWLCTITGF------------D--SFSLQPNAGAAGEYAGLMVIRAYHKAR-----GD-------------HHRNVCI 684 (1058)
Q Consensus 637 l~~~lael~G~------------~--~~~l~~~sGa~ge~a~llair~y~~~~-----G~-------------~~r~~Vl 684 (1058)
+..|++++++. + ......++|+.+++.++.++|.....+ |. .++..|+
T Consensus 134 v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~ 213 (522)
T TIGR03799 134 VLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAIL 213 (522)
T ss_pred HHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEE
Confidence 99999999852 1 113456677777777777776542110 00 1245788
Q ss_pred EcCCCCCccHHHHHhCCc---EEEEEcCCCCCCCCHHHHHHHHHh---cCCCeEEEEEEcCC-CcccccccHHHHHHHHH
Q 001531 685 IPVSAHGTNPATAAMCGM---KIVSVGTDAKGNINIEELRKAAEA---NRDNLSTLMVTYPS-THGVYEEGIDEICKIIH 757 (1058)
Q Consensus 685 ip~saHg~~pa~a~~~G~---~vv~V~~d~~g~iD~e~L~~~i~~---~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah 757 (1058)
++..+|.+..+.+...|+ +++.||+|++|++|+++|+++|++ .+.++.+|+.+..+ .+|.++ ||++|+++|+
T Consensus 214 ~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiD-pl~eIa~i~~ 292 (522)
T TIGR03799 214 VSERGHYSLGKAADVLGIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNID-PLDEMADIAQ 292 (522)
T ss_pred ECCCchHHHHHHHHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcC-CHHHHHHHHH
Confidence 999999999988999998 899999999999999999999963 22345566666554 589999 7999999999
Q ss_pred HcCCEEEEeccCcccccCcCC------CCccCCcEEEeCCccccccCCCCCCCceeEEEEeC-CCCCCCCC---CCcc-c
Q 001531 758 DNGGQVYMDGANMNAQVGLTS------PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPS---HPVV-S 826 (1058)
Q Consensus 758 ~~g~lv~vD~a~~~al~gl~~------pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~-~l~~~lpg---~~vg-~ 826 (1058)
++|+++|||+|+..+.. +.. .|-.++|.+++|.||||..|+ |.|++++++ ++.+.+.. .+.. .
T Consensus 293 ~~g~~lHVDaA~gg~~~-~~~~~r~~l~gle~aDSit~d~HK~l~~P~-----g~G~llvr~~~~~~~~~~~~~Yl~~~~ 366 (522)
T TIGR03799 293 ELGCHFHVDAAWGGATL-LSNTYRHLLKGIERADSVTIDAHKQLYVPM-----GAGMVLFKDPALMSAIEHHAEYILRKG 366 (522)
T ss_pred HcCCeEEEEchhhhHHH-hCHHHHHHhcCchhCCEEEEChhhcCCcCc-----ccEEEEEeCHHHHHHhccCcchhcCCC
Confidence 99999999998542211 111 122479999999999996554 467888885 33222211 1100 0
Q ss_pred CCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCccceE
Q 001531 827 TGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHE 904 (1058)
Q Consensus 827 ~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~--~~v~~~g~~~~~~~e 904 (1058)
..+.+ ..... ++ . ...+...|+.+..+|.+|++++.++.+.+++|+.++|++. ++++. .+..+.
T Consensus 367 ~~d~~----~~~le--gs-R---~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~----~p~l~i 432 (522)
T TIGR03799 367 SKDLG----SHTLE--GS-R---PGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVT----EPELCL 432 (522)
T ss_pred CCccc----cceee--cC-c---chHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEec----CCCccE
Confidence 00111 01111 11 1 1223357999999999999999999999999999999875 55542 234555
Q ss_pred EEEecccccccC-------------C--CC--HHHHHHHHHHCCccc-c-C-C---CCCC--CCEEEEEcC-CCCCHHHH
Q 001531 905 FIVDLRGLKNTA-------------G--IE--PEDVAKRLMDYGFHG-P-T-M---SWPV--PGTLMIEPT-ESESKEEL 958 (1058)
Q Consensus 905 ~vv~~~~~~~~~-------------g--~~--~~~v~k~L~~~Gi~~-~-~-~---~~p~--~~~Lris~t-e~~t~eei 958 (1058)
++|+..+-.... + .+ ...|.+++.+.|... . + + .|.- .-.+|+++. ..+|+++|
T Consensus 433 v~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i 512 (522)
T TIGR03799 433 LTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEIL 512 (522)
T ss_pred EEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCCHHHH
Confidence 666643210000 0 00 135667777777652 1 1 1 1210 135899885 46778888
Q ss_pred HHHHHH
Q 001531 959 DRYCDA 964 (1058)
Q Consensus 959 d~fi~a 964 (1058)
+.+++.
T Consensus 513 ~~~l~~ 518 (522)
T TIGR03799 513 QDILDE 518 (522)
T ss_pred HHHHHH
Confidence 887654
No 69
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.87 E-value=2.3e-20 Score=217.92 Aligned_cols=307 Identities=17% Similarity=0.202 Sum_probs=211.0
Q ss_pred HHHHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHH-----------------------HHHcCCCCCCEEEEc
Q 001531 630 YQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY-----------------------HKARGDHHRNVCIIP 686 (1058)
Q Consensus 630 ~~~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y-----------------------~~~~G~~~r~~Vlip 686 (1058)
..++.....+..++++|.+.++++|.||++++.++++++..- -.-|..-++++|+..
T Consensus 93 ~d~ie~l~~~ra~~lf~a~~anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l 172 (493)
T PRK13580 93 VDTVEWEAAEHAKELFGAEHAYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGM 172 (493)
T ss_pred HHHHHHHHHHHHHHHhCCCcccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEee
Confidence 334555567788999999999999999999998888776521 000111126788876
Q ss_pred CCCCCccHH-----HHHhCCcEEEEEcCCC-CCCCCHHHHHHHHHhcCCCeEEEEEEcCCCcccccccHHHHHHHHHHcC
Q 001531 687 VSAHGTNPA-----TAAMCGMKIVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNG 760 (1058)
Q Consensus 687 ~saHg~~pa-----~a~~~G~~vv~V~~d~-~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~G~i~~dI~eI~~lah~~g 760 (1058)
+..||-|-. ......++++..++|+ +|.+|++++++++. +++..|+++..+.+|... |+++|+++|+++|
T Consensus 173 ~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~---~~~plvii~g~S~~~~~~-dl~~i~eia~~~g 248 (493)
T PRK13580 173 SLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAR---EFKPLILVAGYSAYPRRV-NFAKLREIADEVG 248 (493)
T ss_pred cCCCCCeeecCcccchhhheeeeEecccCcccCccCHHHHHHHHh---hcCCEEEEeCccccCCCc-CHHHHHHHHHHcC
Confidence 666665422 1222236777778875 59999999999997 667777777765445555 7999999999999
Q ss_pred CEEEEeccCcccccCc-C-----CCCccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCC
Q 001531 761 GQVYMDGANMNAQVGL-T-----SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPE 834 (1058)
Q Consensus 761 ~lv~vD~a~~~al~gl-~-----~pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~ 834 (1058)
++++||+||..++.+. . .| ..++||+++++||+| +||.+|+|++++++.+++- ..
T Consensus 249 A~L~VD~AH~~Gligg~~~~~~~~~-~~~~D~vtgT~hKaL------~GP~GG~I~~~~~l~~~L~-~a----------- 309 (493)
T PRK13580 249 AVLMVDMAHFAGLVAGKVFTGDEDP-VPHADIVTTTTHKTL------RGPRGGLVLAKKEYADAVD-KG----------- 309 (493)
T ss_pred CEEEEECchhhceeccccchhhcCC-CCCCcEEEeCChhhc------cCCCeEEEEecHHHHHHHh-hC-----------
Confidence 9999999997665431 1 12 237999999999998 4687799999987766551 00
Q ss_pred CCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEeccccc
Q 001531 835 KSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLK 913 (1058)
Q Consensus 835 ~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~ 913 (1058)
+ +.+.+++. ...+++.+.+. ..+...++++.+++.+.|+++|++.|++. +.++..+ ...|.+.+++.+.
T Consensus 310 ~----P~i~gg~l-~p~iAA~avAl-~e~~~~ef~~y~~~l~~Na~~La~~L~~~G~~vv~gg---TdshIV~V~lg~~- 379 (493)
T PRK13580 310 C----PLVLGGPL-PHVMAAKAVAL-AEARTPEFQKYAQQVVDNARALAEGFLKRGARLVTGG---TDNHLVLIDVTSF- 379 (493)
T ss_pred C----CcccCCCc-cHHHHHHHHHH-HHHhCccHHHHHHHHHHHHHHHHHHHHhcCCCccCCC---CCCCEEEEEeCCH-
Confidence 0 00110011 11233333333 33333345778889999999999999875 7764322 2347777887531
Q ss_pred ccCCCCHHHHHHHHHHCCccccCCCCC-C------CCEEEEEcCCC----CCHHHHHHHHHHHHHHHHHH
Q 001531 914 NTAGIEPEDVAKRLMDYGFHGPTMSWP-V------PGTLMIEPTES----ESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 914 ~~~g~~~~~v~k~L~~~Gi~~~~~~~p-~------~~~Lris~te~----~t~eeid~fi~aL~~i~~e~ 972 (1058)
+.....+.++|.+.||.++....| + ...|||+++.. .+++||+++++.|.++++..
T Consensus 380 ---~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 380 ---GLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred ---HHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 233457888999999998766555 2 35799999984 46999999999999887654
No 70
>PRK02948 cysteine desulfurase; Provisional
Probab=99.87 E-value=1e-19 Score=211.91 Aligned_cols=306 Identities=16% Similarity=0.203 Sum_probs=204.9
Q ss_pred HHHHHHHHHHHHHHhCCCceeeec-CchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHH---HHhCCcEEEE
Q 001531 631 QEMFNNLGEWLCTITGFDSFSLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCGMKIVS 706 (1058)
Q Consensus 631 ~~~~~el~~~lael~G~~~~~l~~-~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~---a~~~G~~vv~ 706 (1058)
.+.+.++++.+++++|.+...+.. ++++++.. ++++.+.... ..++++|+++...|.++..+ ++..|++++.
T Consensus 42 ~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~---~~~~~~~~~~-~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~ 117 (381)
T PRK02948 42 SSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNY---LAIQSLLNAL-PQNKKHIITTPMEHASIHSYFQSLESQGYTVTE 117 (381)
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHH---HHHHHHHHhc-cCCCCEEEECCcccHHHHHHHHHHHhCCCEEEE
Confidence 456888999999999987654444 44454443 3333332211 12457899988888776655 4567999999
Q ss_pred EcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCc
Q 001531 707 VGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 785 (1058)
Q Consensus 707 V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaD 785 (1058)
++++++|.+|+++|+++++ +++++|++++|+ .+|.+. |+++|+++|+++|+++++|+++..+...+ ...++|+|
T Consensus 118 v~~~~~~~~d~~~l~~~l~---~~~~lv~~~~~~n~tG~~~-~~~~I~~l~~~~~~~vivD~~~~~g~~~~-~~~~~~~d 192 (381)
T PRK02948 118 IPVDKSGLIRLVDLERAIT---PDTVLASIQHANSEIGTIQ-PIAEIGALLKKYNVLFHSDCVQTFGKLPI-DVFEMGID 192 (381)
T ss_pred EeeCCCCCCCHHHHHHhcC---CCCEEEEEECCcCCcEeeh-hHHHHHHHHHHcCCEEEEEChhhcccccc-CcccCCCC
Confidence 9998889999999999996 788999999995 799998 79999999999999999998865332222 23467999
Q ss_pred EEEeCCccccccCCCCCCCceeEEEEeCCCC--CCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHH
Q 001531 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLA--PFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 863 (1058)
Q Consensus 786 i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~--~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~l 863 (1058)
+++.++||+| |.+|+|++++++++. +..++.. ...+.+.++.++. + ..++.+.+..+
T Consensus 193 ~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~~~-------~~~~~~~~t~~~~-------~-~~a~~~al~~~ 251 (381)
T PRK02948 193 SLSVSAHKIY------GPKGVGAVYINPQVRWKPVFPGTT-------HEKGFRPGTVNVP-------G-IAAFLTAAENI 251 (381)
T ss_pred EEEecHHhcC------CCCcEEEEEEcCCCCCCCcccCCC-------CCCCcCCCCccHH-------H-HHHHHHHHHHH
Confidence 9999999976 345789999987641 1111110 0000111111111 1 11122223332
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCc-cceEEEEecccccccCCCCHHHHHHHHHHCCccccCCC---
Q 001531 864 GSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGT-VAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS--- 938 (1058)
Q Consensus 864 G~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~-~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~--- 938 (1058)
. +++.+..++...+++++.++|++. +++...+.... ..+.+.+.++ +.+..++.+.|.++||.+...+
T Consensus 252 ~-~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~l~~~gI~v~~g~~c~ 324 (381)
T PRK02948 252 L-KNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIK------GIEGQYTMLECNRRGIAISTGSACQ 324 (381)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCcCCEEEEEeC------CCCHHHHHHhcccCCEEEEchHhcC
Confidence 2 346667778888999999999886 55533221111 1111223322 4567888889989999875321
Q ss_pred --C--C-------------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001531 939 --W--P-------------VPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1058)
Q Consensus 939 --~--p-------------~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~ 973 (1058)
+ | ..+.+||+++..+|++|+|+++++|++++++..
T Consensus 325 ~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 376 (381)
T PRK02948 325 VGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQFY 376 (381)
T ss_pred CCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 1 1 136899999999999999999999999877654
No 71
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.87 E-value=1.1e-20 Score=208.57 Aligned_cols=337 Identities=20% Similarity=0.258 Sum_probs=233.0
Q ss_pred HhcCccCcCcccccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCCceeeecCchHH
Q 001531 580 LQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAA 659 (1058)
Q Consensus 580 l~~~~~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~~~~l~~~sGa~ 659 (1058)
++++|+....-|--+||. -.|.++|-.|-.+ |+.-+-| .-++..-..+..++|+|.+.+++||.||++
T Consensus 32 IASEN~~S~aV~~A~gS~--ltnKYAEGyPgkR--yYgGce~--------VD~vE~laierak~LFga~~anVQPhSGs~ 99 (413)
T COG0112 32 IASENFTSPAVMEAQGSD--LTNKYAEGYPGKR--YYGGCEY--------VDEVEELAIERAKKLFGAEYANVQPHSGSQ 99 (413)
T ss_pred eeccccCCHHHHHHHhhh--hhhccccCCCCcc--ccCCCee--------HHHHHHHHHHHHHHHhCCCccccCCCCchH
Confidence 566775433223344552 2355666665332 3222222 123444566788999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHH---HHhCC--cEEEEEcCCCC-CCCCHHHHHHHHHhcCCCeEE
Q 001531 660 GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCG--MKIVSVGTDAK-GNINIEELRKAAEANRDNLST 733 (1058)
Q Consensus 660 ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~---a~~~G--~~vv~V~~d~~-g~iD~e~L~~~i~~~~~~taa 733 (1058)
++.+.++++. .++|+|+-.+-.||-|-.. ....| ++++..++|++ +.+|.|++++++.+++++ .
T Consensus 100 AN~av~~All--------~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK--~ 169 (413)
T COG0112 100 ANQAVYLALL--------QPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVKPK--L 169 (413)
T ss_pred HHHHHHHHHc--------CCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHHhCCC--E
Confidence 9988888764 3678899777777765432 22223 57788888855 999999999999976555 4
Q ss_pred EEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCcccc---cCcCCCCccCCcEEEeCCccccccCCCCCCCceeEEE
Q 001531 734 LMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ---VGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIG 810 (1058)
Q Consensus 734 V~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al---~gl~~pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~ 810 (1058)
|+.-...+.-.+ |+++++++|++.|+.|.+|.||..++ +.+..|-.. +||++.+.|||| .||+.|+|.
T Consensus 170 ii~G~SaY~r~i--d~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~-AdvVTtTTHKTl------rGPrGG~Il 240 (413)
T COG0112 170 IIAGGSAYSRPI--DFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH-ADVVTTTTHKTL------RGPRGGIIL 240 (413)
T ss_pred EEECcccccccc--CHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCc-cceEeCCcccCC------CCCCceEEE
Confidence 555544454444 69999999999999999999985433 345667666 999999999998 689999999
Q ss_pred EeC-CCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc
Q 001531 811 VKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH 889 (1058)
Q Consensus 811 ~~~-~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~ 889 (1058)
+++ ++..++...++ +.+.+.+. .-.+++.+.++ ......++++.+++.+.||+.|++.|.+.
T Consensus 241 ~~~eel~kkin~aVF---------------Pg~qggpl-~HviAakaVa~-~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~ 303 (413)
T COG0112 241 TNDEELAKKINSAVF---------------PGLQGGPL-MHVIAAKAVAF-KEALEPEFKEYAKQVVKNAKALAEALKER 303 (413)
T ss_pred eccHHHHHHhhhhcC---------------CccCCChH-HHHHHHHHHHH-HHHcChhHHHHHHHHHHHHHHHHHHHHHc
Confidence 996 66655532221 11111111 11233444444 44445679999999999999999999875
Q ss_pred -CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccC--CCC----C-CCCEEEEEcCCCCC----HHH
Q 001531 890 -YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT--MSW----P-VPGTLMIEPTESES----KEE 957 (1058)
Q Consensus 890 -~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~--~~~----p-~~~~Lris~te~~t----~ee 957 (1058)
++++. | ++..|.+++|+++ .+++..++.+.|.+.||.++. +-| | ++..+||...+.+| ++|
T Consensus 304 G~~vvs-G--gTdnHl~lVDl~~----~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e 376 (413)
T COG0112 304 GFKVVS-G--GTDNHLVLVDLRS----KGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAE 376 (413)
T ss_pred CCeEec-C--CccceEEEEEccc----CCCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHH
Confidence 88764 3 4677999999873 367889999999999998764 222 2 35679998777554 567
Q ss_pred HHHHHHHHHHHHHH
Q 001531 958 LDRYCDALISIREE 971 (1058)
Q Consensus 958 id~fi~aL~~i~~e 971 (1058)
+.+..+.+.+++..
T Consensus 377 ~~~Ia~~I~~vl~~ 390 (413)
T COG0112 377 MEEIADLIADVLDG 390 (413)
T ss_pred HHHHHHHHHHHHhc
Confidence 77777776666554
No 72
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.87 E-value=7.4e-21 Score=221.87 Aligned_cols=312 Identities=18% Similarity=0.212 Sum_probs=221.7
Q ss_pred CcccccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHH
Q 001531 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (1058)
Q Consensus 164 n~~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea 243 (1058)
|...++|||++.+|.++.+++. .+.. |.+ ++-.+.+..|+...+.++|+.+|+++|.+. +.+|++|..++.+
T Consensus 106 ~FsSndYLGL~~~p~v~~a~~~-ai~~---yG~--g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~--all~sSGy~AN~~ 177 (476)
T PLN02955 106 LFSGNDYLGLSSHPTISNAAAN-AAKE---YGM--GPKGSALICGYTTYHRLLESSLADLKKKED--CLVCPTGFAANMA 177 (476)
T ss_pred EeeccCccCCCCCHHHHHHHHH-HHHH---cCC--CCCCcCccccChHHHHHHHHHHHHHHCCCc--EEEECChHHHHHH
Confidence 4556789999998887777774 4442 334 333667889999999999999999999988 8899999999888
Q ss_pred HHHHhc-----c------ccCCCCEEEEcCCCCHHHHHHHHHhhcCC-CeE---EEEeCchhhhc-c---CCCEeEEEEE
Q 001531 244 MAMCNN-----I------QKGKKKTFIIASNCHPQTIDICITRADGF-DIK---VVVSDLKDIDY-K---SGDVCGVLVQ 304 (1058)
Q Consensus 244 ~~~a~~-----~------~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~-gi~---v~~v~~~~l~~-l---~~~t~~V~v~ 304 (1058)
++-++. . ..++++.|+.++.+|+|+++.++. ++.. +.+ +.+.|+++|++ + .++.+ ++|+
T Consensus 178 ~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~l-s~~~~~a~~~~f~HND~~~Le~~L~~~~~~~~-~Vv~ 255 (476)
T PLN02955 178 AMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRL-AERQGNVEVFVYRHCDMYHLNSLLSSCKMKRK-VVVT 255 (476)
T ss_pred HHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHh-ccccCCceEEEeCCCCHHHHHHHHHhCCCCce-EEEE
Confidence 876651 0 013567899999999999999974 3322 344 35567788876 4 23334 4555
Q ss_pred cC--CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCC-----cc----cceEEEecC-cccccccCCCCCceEE
Q 001531 305 YP--GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPG-----EL----GADIVVGSA-QRFGVPMGYGGPHAAF 372 (1058)
Q Consensus 305 ~p--n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~-----~~----GaDivvgs~-k~lg~P~~~GGP~~G~ 372 (1058)
.+ ++.|.+.|+++|.++++++|++++| +|.++.|++.+-| .+ ..||++++. |.||.. | ||
T Consensus 256 EgV~SmdGdiapL~eL~~L~~~~ga~LiV-DEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~---G----Gf 327 (476)
T PLN02955 256 DSLFSMDGDFAPMEELSQLRKKYGFLLVI-DDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCH---G----GF 327 (476)
T ss_pred eCCCCCCCCcCCHHHHHHHHHHcCcEEEE-cccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhcc---C----ce
Confidence 54 8999999999999999999999999 5678888776532 24 368999996 998742 3 68
Q ss_pred EEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHH-HhCcccHHHHHHHHH
Q 001531 373 LATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAV-YHGPEGLKTIAQRVH 451 (1058)
Q Consensus 373 l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~-~~g~~Gl~~ia~~~~ 451 (1058)
+++++++++.+ +..+.++|+|+...++++++...+ .+...+ ....++++
T Consensus 328 i~gs~~~~~~l-----------------------------~~~~~~~ifStalpp~~aaa~laal~l~~~~-~~~r~~L~ 377 (476)
T PLN02955 328 IACSKKWKQLI-----------------------------QSRGRSFIFSTAIPVPMAAAAYAAVVVARKE-KWRRKAIW 377 (476)
T ss_pred eecHHHHHHHH-----------------------------HHhCCCCeecccccHHHHHHHHHHHHHHhcC-HHHHHHHH
Confidence 88888766554 122345566654444444333211 121222 34678889
Q ss_pred HHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC-HHHHHHHHHHcCceeeec-----c--CCeEEEEeccCCCHHHHHHH
Q 001531 452 GLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVV-----D--SNTVTASFDETTTLEDVDKL 523 (1058)
Q Consensus 452 ~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~-~~~l~~~L~~~GI~~~~~-----~--~~~lris~~~~~t~edid~l 523 (1058)
++.+|+++. .| +.+ ..|.+ ++.+..+. +.++.+.|.++||++..+ + ..++|++++..||++||+++
T Consensus 378 ~n~~~fr~~---~G-~~~-~sPI~-pI~ig~~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~l 451 (476)
T PLN02955 378 ERVKEFKAL---SG-VDI-SSPII-SLVVGNQEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKL 451 (476)
T ss_pred HHHHHHHHh---cC-CCC-CCCEE-EEEeCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHH
Confidence 999999984 35 553 22322 34444333 788999999999998643 1 25799999999999999999
Q ss_pred HHHHhC
Q 001531 524 FIVFAG 529 (1058)
Q Consensus 524 l~al~~ 529 (1058)
+++|..
T Consensus 452 v~~L~~ 457 (476)
T PLN02955 452 ITALSS 457 (476)
T ss_pred HHHHHH
Confidence 999963
No 73
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.87 E-value=1.4e-20 Score=218.44 Aligned_cols=303 Identities=19% Similarity=0.245 Sum_probs=209.3
Q ss_pred cHHHHHHHHHHHHHHHhCCCc-ee-eecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHH----HHhCCc
Q 001531 629 GYQEMFNNLGEWLCTITGFDS-FS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGM 702 (1058)
Q Consensus 629 G~~~~~~el~~~lael~G~~~-~~-l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~----a~~~G~ 702 (1058)
-..+++.++++.+++++|.+. .. +...+++.+...++.++.. . ..++++|++....|.++... ++..|+
T Consensus 40 ~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~---~--~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~ 114 (371)
T PF00266_consen 40 EFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLN---P--LKPGDEVLVTSNEHPSNRYPWEEIAKRKGA 114 (371)
T ss_dssp HHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHH---H--GTTTCEEEEEESSHHHHHHHHHHHHHHTTE
T ss_pred hhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhcccc---c--cccccccccccccccccccccccccccchh
Confidence 356788899999999999998 54 3444555454333333321 1 12567899888777666522 347899
Q ss_pred EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCc
Q 001531 703 KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY 781 (1058)
Q Consensus 703 ~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~ 781 (1058)
+++.++.+.++.+|+++++++|+ +++.+|++++- +.+|++. |+++|+++||++|+++++|+++..+...+ ...+
T Consensus 115 ~v~~i~~~~~~~~~~~~~~~~l~---~~~~lv~~~~~~~~tG~~~-pi~~I~~~~~~~~~~~~vD~~~~~g~~~i-d~~~ 189 (371)
T PF00266_consen 115 EVRVIPADPGGSLDLEDLEEALN---PDTRLVSISHVENSTGVRN-PIEEIAKLAHEYGALLVVDAAQSAGCVPI-DLDE 189 (371)
T ss_dssp EEEEEEEGTTSSCSHHHHHHHHH---TTESEEEEESBETTTTBBS-SHHHHHHHHHHTTSEEEEE-TTTTTTSS---TTT
T ss_pred hhccccccccchhhhhhhhhhhc---cccceEEeecccccccEEe-eeceehhhhhccCCceeEechhccccccc-cccc
Confidence 99999998889999999999997 89999999987 5689998 79999999999999999999986555433 3457
Q ss_pred cCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccC-CCC------C----CCCCCCCCCCCCccchhhH
Q 001531 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVST-GGI------P----APEKSQPLGTIAAAPWGSA 850 (1058)
Q Consensus 782 ~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~-~d~------g----~~~~~~~t~~i~sa~~g~~ 850 (1058)
+|+|+++++.|| |+ |+||+|++++++++...+.....++. .+. + .+..+.+|.++.
T Consensus 190 ~~~D~~~~s~~K-l~-----gp~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~------- 256 (371)
T PF00266_consen 190 LGADFLVFSSHK-LG-----GPPGLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVP------- 256 (371)
T ss_dssp TTESEEEEESTS-TT-----SSSTEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HH-------
T ss_pred cccceeeecccc-cC-----CCCchhhheehhhhhhccccccccccccccccchhcccccccccccccceeee-------
Confidence 899999999999 84 56789999999865544421111111 000 0 000111222221
Q ss_pred HHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccC--CCccceEEEEecccccccCCCCHHHHHHHHH
Q 001531 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGV--NGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 928 (1058)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~--~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~ 928 (1058)
.+......+..+.+.|++++.++...+++++.+.|+++..+...++ .......+.+.++ +.+..++.++|.
T Consensus 257 -~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~L~ 329 (371)
T PF00266_consen 257 -AIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLP------GSDADDVVKYLE 329 (371)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEET------TSSHHHHHHHHH
T ss_pred -hhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeec------CCCHHHHHHHHh
Confidence 1222344566666778888889999999999999998744433232 1112233455554 578899999999
Q ss_pred HCCccccCCCC---C------CCCEEEEEcCCCCCHHHHHHH
Q 001531 929 DYGFHGPTMSW---P------VPGTLMIEPTESESKEELDRY 961 (1058)
Q Consensus 929 ~~Gi~~~~~~~---p------~~~~Lris~te~~t~eeid~f 961 (1058)
++||.+..-.. | ..+.+|+++..++|++|||+|
T Consensus 330 ~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 330 ERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp HHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred hcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 99998754111 1 248999999999999999986
No 74
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.87 E-value=2.3e-19 Score=209.16 Aligned_cols=308 Identities=15% Similarity=0.160 Sum_probs=198.5
Q ss_pred HHHHHHHHHHHhCC-Cceeee-cCchHHHHHHHHHHHHHHHHHcC-CCCCCEEEEcCCCCCccHHH---HHhCCcEEEEE
Q 001531 634 FNNLGEWLCTITGF-DSFSLQ-PNAGAAGEYAGLMVIRAYHKARG-DHHRNVCIIPVSAHGTNPAT---AAMCGMKIVSV 707 (1058)
Q Consensus 634 ~~el~~~lael~G~-~~~~l~-~~sGa~ge~a~llair~y~~~~G-~~~r~~Vlip~saHg~~pa~---a~~~G~~vv~V 707 (1058)
+.+..+.+.+.+|. +...+. .++++++. .++++.+....- ..++++|+++...|.++..+ ++..|++++.+
T Consensus 44 l~~a~~~~~~~~~~~~~~~i~~t~g~teal---~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v 120 (382)
T TIGR03403 44 IAEALDKLYKGINARDLDDIIITSCATESN---NWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYL 120 (382)
T ss_pred HHHHHHHHHHHcCcCCCCeEEEeCCHHHHH---HHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEE
Confidence 44444555555665 343444 44444333 344443321000 11346799988878766654 45689999999
Q ss_pred cCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcE
Q 001531 708 GTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 786 (1058)
Q Consensus 708 ~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi 786 (1058)
|++++|.+|+++|+++++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+... ....++|+|+
T Consensus 121 ~~~~~g~~d~~~l~~~i~---~~t~lv~~~~~~n~tG~~~-~~~~I~~la~~~g~~~ivD~a~~~g~~~-~~~~~~~~D~ 195 (382)
T TIGR03403 121 PINEQGTITAEQVREAIT---EKTALVSVMWANNETGMIF-PIKEIGEICKERGVLFHTDAVQAIGKIP-VDVQKAGVDF 195 (382)
T ss_pred ecCCCCCCCHHHHHHhcc---cCCeEEEEEcccCCCcccc-CHHHHHHHHHHcCCEEEEechhhcCCCc-cCccccCCCE
Confidence 999889999999999996 788899999884 789998 7999999999999999999996533221 2334689999
Q ss_pred EEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001531 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1058)
Q Consensus 787 ~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1058)
+++++||++ |.||+|++++++.+. .-| .+.|. .+ ....+.++.++. +++ .+...+..+ .+
T Consensus 196 ~~~s~~K~~------gp~G~g~l~vr~~~~-~~p-~~~g~--~~-~~~~~~gt~~~~-------~~~-al~~al~~~-~~ 255 (382)
T TIGR03403 196 LSFSAHKFH------GPKGVGGLYIRKGVE-LTP-LFHGG--EH-MGGRRSGTLNVP-------YIV-AMGEAMRLA-NE 255 (382)
T ss_pred EEEcchhhC------CCCceEEEEECCCCC-CCC-cccCC--CC-CCCcccCCcChH-------HHH-HHHHHHHHH-HH
Confidence 999999975 446789999987642 112 11111 00 001111222221 111 112222222 33
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCeeeccCCC-ccceEEEEecccccccCCCCHHHHHHHHHHCCccccCC--------
Q 001531 867 GLTEASKIAILNANYMAKRLEKHYPILFRGVNG-TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM-------- 937 (1058)
Q Consensus 867 Gl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~-~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~-------- 937 (1058)
++....++....+++|.++|+++..+.+.++.. ...+.+.+.++ +++..++.+.|.++||.+..-
T Consensus 256 ~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~L~~~gI~v~~g~~c~~~~~ 329 (382)
T TIGR03403 256 YLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIK------GVEGEAMLWDLNKAGIAASTGSACASEDL 329 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeC------CCCHHHHHHhhccCCEEEEchhccCCCCC
Confidence 455566677778889999998753333323211 11223345543 567889999999999987631
Q ss_pred ---------CCC---CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 001531 938 ---------SWP---VPGTLMIEPTESESKEELDRYCDALISIREEIAQI 975 (1058)
Q Consensus 938 ---------~~p---~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~~~ 975 (1058)
... ..+.+|++++..+|++|||+|+++|++++++++.+
T Consensus 330 ~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~~~ 379 (382)
T TIGR03403 330 EANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLRAI 379 (382)
T ss_pred CcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 110 12679999999999999999999999998887653
No 75
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.87 E-value=5.5e-20 Score=218.80 Aligned_cols=304 Identities=19% Similarity=0.202 Sum_probs=204.4
Q ss_pred HHHHH-HHHHHHHHhCCCc----eeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHH--------
Q 001531 632 EMFNN-LGEWLCTITGFDS----FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA-------- 698 (1058)
Q Consensus 632 ~~~~e-l~~~lael~G~~~----~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~-------- 698 (1058)
+.+++ .++.+++++|.+. .++++.+|++++.+++.++. +++++|++....||.+.....
T Consensus 79 ~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al~--------~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~ 150 (452)
T PTZ00094 79 DKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTALL--------QPHDRIMGLDLPSGGHLTHGFYTAKKKVS 150 (452)
T ss_pred HHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHhc--------CCCCEEEecccccCCcccccccccccccc
Confidence 44443 6779999999875 34566788877754444441 246789998888988765321
Q ss_pred --hCCcEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCcccccCc
Q 001531 699 --MCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL 776 (1058)
Q Consensus 699 --~~G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl 776 (1058)
..+++++.++++.+|.+|+++|+++++++ +++.|+++. +.+|... |+++|+++||++|++++||++|..++.+.
T Consensus 151 ~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~--~~~lvi~~~-s~~g~~~-di~~I~~i~~~~ga~l~vDaaq~~G~i~~ 226 (452)
T PTZ00094 151 ATSIYFESLPYQVNEKGLIDYDKLEELAKAF--RPKLIIAGA-SAYPRDI-DYKRFREICDSVGAYLMADIAHTSGLVAA 226 (452)
T ss_pred cceeeeeeeecccCCCCCcCHHHHHHHHHHh--CCCEEEEeC-CCCCCcc-CHHHHHHHHHHcCCEEEEeccchhccccC
Confidence 12355667777778999999999999743 344455554 4578887 89999999999999999999987555432
Q ss_pred ---CCCCccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHH
Q 001531 777 ---TSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (1058)
Q Consensus 777 ---~~pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~ 853 (1058)
..|. .|+|++++++|||| +||.+|++++++++.+.+.... .. ...+...+++ +...+
T Consensus 227 ~~~~~~~-~~~D~l~~S~hK~l------~GP~Gg~l~~~~~~~~~l~~~~-~~----------~~~p~~~G~~--~~~~i 286 (452)
T PTZ00094 227 GVLPSPF-PYADVVTTTTHKSL------RGPRSGLIFYRKKVKPDIENKI-NE----------AVFPGLQGGP--HNHQI 286 (452)
T ss_pred CCCCCCC-CCCcEEEcCCccCC------CCCCceEEEEecccchHHHHhh-cc----------ccCCCCCCCc--hHHHH
Confidence 1232 38999999999998 4676688888876543321110 00 0000111111 11222
Q ss_pred HHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCc
Q 001531 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 932 (1058)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi 932 (1058)
++..+.+..+...++.+..++...++++|.+.|++. +++...+. . .|..++++.. .+++..++.+.|.++||
T Consensus 287 aal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g~~v~~~~~-~--~~~~~v~~~~----~~~~~~~~~~~L~~~gI 359 (452)
T PTZ00094 287 AAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRGYDLVTGGT-D--NHLVLVDLRP----FGITGSKMEKLLDAVNI 359 (452)
T ss_pred HHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCCcEEecCCC-C--CceEeecCCc----CCCCHHHHHHHHHHCCc
Confidence 233444566655677778888999999999999874 66643221 1 2445666542 35678899999988999
Q ss_pred cccCCCCC------CCCEEEEEcCCCCC----HHHHHHHHHHHHHHHHHHHH
Q 001531 933 HGPTMSWP------VPGTLMIEPTESES----KEELDRYCDALISIREEIAQ 974 (1058)
Q Consensus 933 ~~~~~~~p------~~~~Lris~te~~t----~eeid~fi~aL~~i~~e~~~ 974 (1058)
.+....-| .++.+|+++++.+| ++||++++++|.+++.....
T Consensus 360 ~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~~~~ 411 (452)
T PTZ00094 360 SVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKLAQE 411 (452)
T ss_pred EEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 87422111 24789999988776 99999999999999887544
No 76
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.86 E-value=6.4e-20 Score=215.16 Aligned_cols=323 Identities=14% Similarity=0.105 Sum_probs=226.2
Q ss_pred ccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCc-ceEeecchHHHHHHHHHHh
Q 001531 170 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMS-NASLLDEGTAAAEAMAMCN 248 (1058)
Q Consensus 170 ~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~a-nasl~~~~Taa~ea~~~a~ 248 (1058)
+.+.| |..+|..+.+++. ++. ..+. +.+..+.+.+.++.+++++|.+.. .+.+..+||+++++++.++
T Consensus 12 l~~pG--P~~~~~~V~~a~~-~~~--~~~~------~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~ 80 (401)
T PLN02409 12 LFVPG--PVNIPERVLRAMN-RPN--EDHR------SPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNT 80 (401)
T ss_pred eccCC--CCCCCHHHHHHhc-CCC--CCCC------CHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhc
Confidence 44666 6778777765543 222 2221 334456777888999999999754 4556678888887777654
Q ss_pred ccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cCC----CEeEEEEEcC-CCceeecc
Q 001531 249 NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSG----DVCGVLVQYP-GTEGEVLD 314 (1058)
Q Consensus 249 ~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~--------~~l~~-l~~----~t~~V~v~~p-n~~G~i~d 314 (1058)
+ ++||+|+++...|++.. |...++..|++++.++. +++++ +++ ++++|+++++ |.+|.+.|
T Consensus 81 -~--~~Gd~Vlv~~~~~~~~~--~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~ 155 (401)
T PLN02409 81 -L--SPGDKVVSFRIGQFSLL--WIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTND 155 (401)
T ss_pred -C--CCCCEEEEeCCCchhHH--HHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCC
Confidence 3 38999999999887764 33445667888887754 34554 543 7899998875 78999999
Q ss_pred HHHHHHH--HHhcCcEEEEEeccccccCCC-CCCcccceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEee
Q 001531 315 YGDFIKN--AHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGV 390 (1058)
Q Consensus 315 l~~I~~~--a~~~galliV~a~~~slg~l~-~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~ 390 (1058)
+++|+++ ||++|++++||+ ..++|.+. +..+||+|++++++ |+|++| ||+||+++++++.+++...-
T Consensus 156 ~~~i~~l~~~~~~g~~~vvD~-v~s~g~~~id~~~~~~D~~~~s~~K~l~~P-----~G~G~l~~~~~~~~~~~~~~--- 226 (401)
T PLN02409 156 LAGVRKLLDCAQHPALLLVDG-VSSIGALDFRMDEWGVDVALTGSQKALSLP-----TGLGIVCASPKALEASKTAK--- 226 (401)
T ss_pred HHHHHHHHhhhccCcEEEEEc-ccccCCccccccccCccEEEEcCccccCcC-----CCcceeEECHHHHHHHhcCC---
Confidence 9999999 999999999943 45666553 44689999999999 667654 56899999998877663210
Q ss_pred eecCCCCcceeeeccccc---ccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCe
Q 001531 391 SIDSSGKPALRVAMQTRE---QHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTV 467 (1058)
Q Consensus 391 s~d~~g~~~~~l~lqtre---q~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~ 467 (1058)
...+.+.+.... +.-.+...|+|+ ..++++.+++ .++..+|++++.+++..+++++++.|+++| +
T Consensus 227 ------~~~~~~~~~~~~~~~~~g~~~~~Tp~~---~~~~al~~al--~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g-~ 294 (401)
T PLN02409 227 ------SPRVFFDWADYLKFYKLGTYWPYTPSI---QLLYGLRAAL--DLIFEEGLENVIARHARLGEATRLAVEAWG-L 294 (401)
T ss_pred ------CCCeecCHHHHHHHHhcCCCCCCCccH---HHHHHHHHHH--HHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-C
Confidence 000111110000 000111235555 5667777776 566678999999999999999999999997 9
Q ss_pred EEcCC--C-CccEE-EEecCC---HHHHHHHHH-HcCceeee----ccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 468 EVQGL--P-FFDTV-KVKCAD---AHAIASAAY-KIEMNLRV----VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 468 ~l~~~--~-~~~~v-~i~~~~---~~~l~~~L~-~~GI~~~~----~~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
+++.+ . ...++ .+..+. +.++.+.|. ++||.+.. ..+..+||+.+-+++.+|+.+++++|+.
T Consensus 295 ~~~~~~~~~~s~~v~~~~~p~~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~ 368 (401)
T PLN02409 295 KLCTKKPEWRSDTVTAVVVPEGIDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEM 368 (401)
T ss_pred eeccCChhhcccceEEEeCCCCCCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHH
Confidence 98742 1 23333 355543 678888875 56998753 2357899999999999999999999974
No 77
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.86 E-value=1.5e-19 Score=212.18 Aligned_cols=308 Identities=15% Similarity=0.163 Sum_probs=202.2
Q ss_pred HHHHHHHHHHHHHhCCCce-eeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHH---HHhCCcEEEEE
Q 001531 632 EMFNNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCGMKIVSV 707 (1058)
Q Consensus 632 ~~~~el~~~lael~G~~~~-~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~---a~~~G~~vv~V 707 (1058)
+.+.++++.+++++|.+.. .+.+++|+.+...++.++..+.. +++++|+++...|.++... ++..|++++.+
T Consensus 47 ~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~----~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v 122 (402)
T TIGR02006 47 EAVENARNQVAELIGADSREIVFTSGATESNNLAIKGIAHFYK----SKGNHIITSKTEHKAVLDTCRYLEREGFEVTYL 122 (402)
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhhc----CCCCEEEECCCccHHHHHHHHHHHhcCCEEEEE
Confidence 5677899999999998753 34455566565444444332111 2467899998888765544 34569999999
Q ss_pred cCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcE
Q 001531 708 GTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 786 (1058)
Q Consensus 708 ~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi 786 (1058)
+++++|.+|+++|+++++ +++++|++++++ .+|.+. |+++|+++||++|+++++|+++..+...+ ...++|+|+
T Consensus 123 ~~~~~~~~d~~~l~~~l~---~~~~lv~v~~~~n~tG~~~-~~~~I~~l~~~~g~~livD~a~a~g~~~~-~~~~~~~D~ 197 (402)
T TIGR02006 123 PPKSNGLIDLEELKAAIR---DDTILVSIMHVNNEIGVIQ-DIAAIGEICRERKVFFHVDAAQSVGKIPI-NVNELKVDL 197 (402)
T ss_pred ccCCCCcCCHHHHHHhcC---CCCEEEEEECCCcCceecc-cHHHHHHHHHHcCCEEEEEcchhcCCccc-CccccCCCE
Confidence 999889999999999996 688999999985 689998 79999999999999999999975433222 234679999
Q ss_pred EEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001531 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1058)
Q Consensus 787 ~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1058)
+++++||++ |.+|+|+++++++....+.....+. ++ .++.+.++.++. ....+ ...+..+ .+
T Consensus 198 ~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~~g~--~~-~~~~~~gt~~~~-----~~~al---~~al~~~-~~ 259 (402)
T TIGR02006 198 MSISGHKIY------GPKGIGALYVRRKPRVRLEALIHGG--GH-ERGMRSGTLPTH-----QIVGM---GEAFRIA-KE 259 (402)
T ss_pred EEEehhhhc------CCCceEEEEEccCCCCCCCceecCC--Cc-cCCccCCCccHH-----HHHHH---HHHHHHH-HH
Confidence 999999965 3347999999975444332211111 00 011112222221 11111 1223333 23
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCeeeccCC-CccceEEEEecccccccCCCCHHHHHHHHHHCCccccC-------CC
Q 001531 867 GLTEASKIAILNANYMAKRLEKHYPILFRGVN-GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-------MS 938 (1058)
Q Consensus 867 Gl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~-~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~-------~~ 938 (1058)
++....++....++++.++|+++..+...++. ....+.+++.+. +.+.+++..+|. |+.+.+ ..
T Consensus 260 ~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~------~~~~~~~~~~l~--~i~v~~G~~c~~~~~ 331 (402)
T TIGR02006 260 EMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFN------YVEGESLIMALK--DLAVSSGSACTSASL 331 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEe------CcCHHHHHHhcC--CEEEechhhcCCCCC
Confidence 56667777778889999999875334222211 112233345543 345667776663 543211 00
Q ss_pred --------CCC-----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001531 939 --------WPV-----PGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1058)
Q Consensus 939 --------~p~-----~~~Lris~te~~t~eeid~fi~aL~~i~~e~~~ 974 (1058)
.++ .+.+|+|+...+|++|||+|+++|++++++.+.
T Consensus 332 ~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~~~ 380 (402)
T TIGR02006 332 EPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKLRE 380 (402)
T ss_pred CccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 001 378999999999999999999999999887655
No 78
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.86 E-value=1.3e-19 Score=210.39 Aligned_cols=306 Identities=16% Similarity=0.178 Sum_probs=204.1
Q ss_pred HHHHHHHHHHHHHHHhCCCce-e-eecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHH----HHHhCCcE
Q 001531 630 YQEMFNNLGEWLCTITGFDSF-S-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMK 703 (1058)
Q Consensus 630 ~~~~~~el~~~lael~G~~~~-~-l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa----~a~~~G~~ 703 (1058)
..+.+.++++++++++|.+.. . +..++++++.. ++++.+. .++++|+++...|+++.. .++..|++
T Consensus 42 ~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~---~~~~~~~-----~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~ 113 (376)
T TIGR01977 42 ASREVEETRQLLAKLFNAPSSAHVVFTNNATTALN---IALKGLL-----KEGDHVITTPMEHNSVARPLECLKEQIGVE 113 (376)
T ss_pred HHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHH---HHHHhcc-----CCCCEEEECcchhhHHHHHHHHHHHHcCcE
Confidence 345677899999999998643 3 33445554442 3333321 256789998877766542 24567999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc
Q 001531 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (1058)
Q Consensus 704 vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~ 782 (1058)
++.++.++++.+|+++|+++++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+...+ ....+
T Consensus 114 ~~~v~~~~~~~~d~~~l~~~~~---~~~~~v~~~~~~n~tG~~~-~~~~i~~l~~~~~~~livD~a~~~g~~~~-~~~~~ 188 (376)
T TIGR01977 114 ITIVKCDNEGLISPERIKRAIK---TNTKLIVVSHASNVTGTIL-PIEEIGELAQENGIFFILDAAQTAGVIPI-DMTEL 188 (376)
T ss_pred EEEEecCCCCCcCHHHHHHhcC---CCCeEEEEECCCCCccccC-CHHHHHHHHHHcCCEEEEEhhhccCccCC-Cchhc
Confidence 9999998888999999999996 789999999985 689998 79999999999999999999975332222 12357
Q ss_pred CCcEEEeCCccccccCCCCCCCceeEEEEeCCC-CCCC-CCCCcccCCCCCC-----CCCCCCCCCCCccchhhHHHHHH
Q 001531 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHL-APFL-PSHPVVSTGGIPA-----PEKSQPLGTIAAAPWGSALILPI 855 (1058)
Q Consensus 783 GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l-~~~l-pg~~vg~~~d~g~-----~~~~~~t~~i~sa~~g~~~~~~~ 855 (1058)
|+|++++++||+|+.| +|.|+++++++. .+.+ .+.......++.. .+.+.++.++ ..+.+
T Consensus 189 ~~D~~~~s~~K~l~~p-----~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~--------~~~~a 255 (376)
T TIGR01977 189 AIDMLAFTGHKGLLGP-----QGTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNT--------PGIAG 255 (376)
T ss_pred CCCEEEecccccccCC-----CCceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCH--------HHHHH
Confidence 9999999999998533 367788887653 2221 1110000000000 0011111111 11223
Q ss_pred HHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCC--CccceEEEEecccccccCCCCHHHHHHHHHHC-Cc
Q 001531 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVN--GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY-GF 932 (1058)
Q Consensus 856 a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~--~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~-Gi 932 (1058)
..+.+..+...|+..+.++...+++++.++|++...+...++. ....+.+.|.++ +.+..++.++|.++ ||
T Consensus 256 ~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~------~~~~~~~~~~L~~~~gi 329 (376)
T TIGR01977 256 LNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVE------GIDSEEVADILDEKFDI 329 (376)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEEC------CCCHHHHHHHHhccCCE
Confidence 3455677777788888888899999999999875322111211 111223444543 46788999999987 88
Q ss_pred cccCCCC----------C-CCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 001531 933 HGPTMSW----------P-VPGTLMIEPTESESKEELDRYCDALIS 967 (1058)
Q Consensus 933 ~~~~~~~----------p-~~~~Lris~te~~t~eeid~fi~aL~~ 967 (1058)
.+..-.+ + ..+.+||+++..+|.+|||+++++|++
T Consensus 330 ~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 330 ATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred EEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 8642110 0 247899999999999999999999976
No 79
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.86 E-value=3.8e-21 Score=202.18 Aligned_cols=309 Identities=15% Similarity=0.140 Sum_probs=227.9
Q ss_pred CcccccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHH
Q 001531 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (1058)
Q Consensus 164 n~~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea 243 (1058)
|.+.+||+|+..||+++.+..+ .+-+.+ .+|-..+...|+-..+.++++.||++-|-+. ..+|+++-.+..+
T Consensus 71 nFcaNnYLGLsshPeii~a~~~-aleeyG-----aGlssvrfIcGtq~iHk~LE~kiAqfh~rED--~ilypscfdANag 142 (417)
T KOG1359|consen 71 NFCANNYLGLSSHPEIINAGQK-ALEEYG-----AGLSSVRFICGTQDIHKLLESKIAQFHGRED--TILYPSCFDANAG 142 (417)
T ss_pred eecccccccccCChHHHHHHHH-HHHHhC-----CCccceeEEecchHHHHHHHHHHHHHhCCCc--eEEeccccccchH
Confidence 5677899999999999988875 343322 2444666789999999999999999999987 6677766666555
Q ss_pred HHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhhc-c-C--CCEeEEEEEcC--CCceeeccHHH
Q 001531 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-K-S--GDVCGVLVQYP--GTEGEVLDYGD 317 (1058)
Q Consensus 244 ~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~~l~~-l-~--~~t~~V~v~~p--n~~G~i~dl~~ 317 (1058)
++-|+. .+.|-|+.++.+|.|+++.++. ++ +..++|+-+++. + . +--.-++++.. ++.|.+.|+++
T Consensus 143 ~feail---~pedAvfSDeLNhASIIdGirL-ck----ry~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaPl~e 214 (417)
T KOG1359|consen 143 AFEAIL---TPEDAVFSDELNHASIIDGIRL-CK----RYRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAPLEE 214 (417)
T ss_pred HHHHhc---ChhhhhhccccccchhhhhhHH-Hh----hhccchhHHHHHHHHHhhhheEEEEEecceeccCCCcccHHH
Confidence 555542 3789999999999999999864 55 344566656654 2 1 11234667775 89999999999
Q ss_pred HHHHHHhcCcEEEEEeccccccCCCCCC-----ccc----ceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcE
Q 001531 318 FIKNAHANGVKVVMATDLLALTILKPPG-----ELG----ADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRI 387 (1058)
Q Consensus 318 I~~~a~~~galliV~a~~~slg~l~~p~-----~~G----aDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgri 387 (1058)
|++++++||+++++ ++.++.|++...| ++| +||+.++. |.+|+- +.||..+.+.++..|
T Consensus 215 i~~La~kYgaLlfi-DecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga------~GGyttgp~~li~ll---- 283 (417)
T KOG1359|consen 215 ISQLAKKYGALLFI-DECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGA------SGGYTTGPKPLISLL---- 283 (417)
T ss_pred HHHHHHhcCcEEEE-eecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCC------CCCCccCChhHHHHH----
Confidence 99999999999999 4567887776543 244 79998886 988643 447888777776554
Q ss_pred EeeeecCCCCcceeeecccccccccccccCCCccchhHHH---HHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcC
Q 001531 388 VGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALL---ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL 464 (1058)
Q Consensus 388 vG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~---a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~ 464 (1058)
|.++++++++++..+ +..+..|..++.. .++..+...+++++++..+..
T Consensus 284 -------------------------rqr~RpylFSnslppavV~~a~ka~dllm~s---~~~i~~~~a~~qrfr~~me~a 335 (417)
T KOG1359|consen 284 -------------------------RQRSRPYLFSNSLPPAVVGMAAKAYDLLMVS---SKEIQSRQANTQRFREFMEAA 335 (417)
T ss_pred -------------------------HhcCCceeecCCCChhhhhhhHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHhc
Confidence 345667777776554 4444455555543 455667788999999999988
Q ss_pred CCeEEcCC-CCccEEEEecCC-HHHHHHHHHHcCceee----e-cc--CCeEEEEeccCCCHHHHHHHHHHHh
Q 001531 465 GTVEVQGL-PFFDTVKVKCAD-AHAIASAAYKIEMNLR----V-VD--SNTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 465 G~~~l~~~-~~~~~v~i~~~~-~~~l~~~L~~~GI~~~----~-~~--~~~lris~~~~~t~edid~ll~al~ 528 (1058)
| |++.+. ...-++.+.... +...++.|.+.||++- + ++ ..++|+.++..||+||||+++++|.
T Consensus 336 G-ftIsg~~hPI~pv~lGda~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~ 407 (417)
T KOG1359|consen 336 G-FTISGASHPICPVMLGDARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFS 407 (417)
T ss_pred C-ceecCCCCCccceecccHHHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHH
Confidence 8 999753 233356665544 8889999999999872 2 22 2579999999999999999999996
No 80
>PLN02651 cysteine desulfurase
Probab=99.86 E-value=1.3e-19 Score=209.84 Aligned_cols=295 Identities=13% Similarity=0.159 Sum_probs=196.3
Q ss_pred HHHHHHHHHHHHHHHhCCCcee-eecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHH---HHhCCcEEE
Q 001531 630 YQEMFNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCGMKIV 705 (1058)
Q Consensus 630 ~~~~~~el~~~lael~G~~~~~-l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~---a~~~G~~vv 705 (1058)
..+.+.++++.+++++|.+... +..++|+++...++.++.... ..++++|+++...|.++... +...|++++
T Consensus 41 ~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~----~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~ 116 (364)
T PLN02651 41 SEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFY----KDKKKHVITTQTEHKCVLDSCRHLQQEGFEVT 116 (364)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhc----cCCCCEEEEcccccHHHHHHHHHHHhcCCEEE
Confidence 3566889999999999987543 444455555433333332111 12467899988888765443 235799999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCC
Q 001531 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA 784 (1058)
Q Consensus 706 ~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~Ga 784 (1058)
.++++++|.+|+++|+++++ +++++|++++++ .+|.+. |+++|+++||++|++++||+++..+... ....++|+
T Consensus 117 ~v~~~~~~~~d~~~l~~~i~---~~t~lv~v~~~~n~tG~~~-~l~~I~~~~~~~g~~~~vD~a~~~g~~~-~~~~~~~~ 191 (364)
T PLN02651 117 YLPVKSDGLVDLDELAAAIR---PDTALVSVMAVNNEIGVIQ-PVEEIGELCREKKVLFHTDAAQAVGKIP-VDVDDLGV 191 (364)
T ss_pred EEccCCCCcCCHHHHHHhcC---CCcEEEEEECCCCCceecc-cHHHHHHHHHHcCCEEEEEcchhhCCcc-cCcccCCC
Confidence 99998889999999999997 789999999885 689998 7999999999999999999997644322 23467899
Q ss_pred cEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHc
Q 001531 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1058)
Q Consensus 785 Di~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1058)
|+++++.||++ |.+|+|++++++++...+.....|... ..+.+.+|.++.. ...+..| +..+-
T Consensus 192 D~~~~s~hK~~------gp~G~g~l~v~~~~~~~l~p~~~g~~~---~~~~~~GT~~~~~-----~~~l~~a---l~~~~ 254 (364)
T PLN02651 192 DLMSISGHKIY------GPKGVGALYVRRRPRVRLEPLMSGGGQ---ERGRRSGTENTPL-----VVGLGAA---CELAM 254 (364)
T ss_pred CEEEechhhhC------CCCceEEEEEcCCCCCCCCccccCCCc---cCCccCCCccHHH-----HHHHHHH---HHHHH
Confidence 99999999963 335899999998777666443333210 1112233444331 1112222 33332
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCC---ccceEEEEecccccccCCCCHHHHHHHHHHCCccccCC---
Q 001531 865 SKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNG---TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM--- 937 (1058)
Q Consensus 865 ~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~---~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~--- 937 (1058)
. +..++.++....++++.++|++. ..+..-++.+ ...+.+.|.++ +++.++++++|.+ |.+..-
T Consensus 255 ~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~L~~--i~v~~g~~c 325 (364)
T PLN02651 255 K-EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFA------YVEGESLLMGLKE--VAVSSGSAC 325 (364)
T ss_pred H-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeC------CCCHHHHHHHhCC--EEEEchhhc
Confidence 2 34666677788889999998752 2232223211 11234445543 5688899999965 554211
Q ss_pred --------------CCC---CCCEEEEEcCCCCCHHHHH
Q 001531 938 --------------SWP---VPGTLMIEPTESESKEELD 959 (1058)
Q Consensus 938 --------------~~p---~~~~Lris~te~~t~eeid 959 (1058)
..+ ..+.+|+|+..++|++|||
T Consensus 326 ~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 326 TSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred CCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 111 1378999999999999986
No 81
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.85 E-value=1.3e-19 Score=210.93 Aligned_cols=296 Identities=13% Similarity=0.027 Sum_probs=207.4
Q ss_pred HHHHHHHHHHHHHhcCCCC-cceEeec-chHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCe-EEEEe
Q 001531 210 LESLLNFQTMIADLTGLPM-SNASLLD-EGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDI-KVVVS 286 (1058)
Q Consensus 210 l~~l~e~q~~ia~L~G~~~-anasl~~-~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi-~v~~v 286 (1058)
.+.+.+.++.+++++|.+. ..+.++. +||.++++++.++ +. +++.+++..++|++....+ .++..|+ +++.+
T Consensus 47 ~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l-~~--~~~~~vi~~g~f~~~~~~~--~~~~~g~~~v~~~ 121 (378)
T PRK03080 47 KALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSL-LG--ARRVDHLAWESFGSKWATD--VVKQLKLEDPRVL 121 (378)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhc-CC--CCcceEEEeCHHHHHHHHH--HHhhcCCCCceEe
Confidence 4677888999999999854 3577776 8999999998876 32 3333444468999865431 1245677 77776
Q ss_pred Cch-----hhhccCCCEeEEEEEc-CCCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCC-CCcccceEEEecC-cc
Q 001531 287 DLK-----DIDYKSGDVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP-PGELGADIVVGSA-QR 358 (1058)
Q Consensus 287 ~~~-----~l~~l~~~t~~V~v~~-pn~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~-p~~~GaDivvgs~-k~ 358 (1058)
+.+ ++++++. ++.|.+++ .|.+|.+.|+++|++ |++|++++||+ ..++|..+- ..+ +|++++++ |+
T Consensus 122 ~~~~g~~~d~~~i~~-~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa-~qs~G~~pidv~~--iD~~~~s~~K~ 195 (378)
T PRK03080 122 EADYGSLPDLSAVDF-DRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDA-TSAAFALPLDWSK--LDVYTFSWQKV 195 (378)
T ss_pred ccCCCCCCCHhhcCC-CCCEEEEecCCccceeccchhhcc--ccCCCeEEEec-ccccccCCCCHHH--CcEEEEehhhh
Confidence 543 2222333 45577766 689999999999999 89999999954 457776542 233 79999999 65
Q ss_pred cccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeeccc--ccccccccccCCCccchhHHHHHHHHHHHH
Q 001531 359 FGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQT--REQHIRRDKATSNICTAQALLANMAAMYAV 436 (1058)
Q Consensus 359 lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqt--req~irRekaTsni~t~~~l~a~~Aa~yl~ 436 (1058)
|++| ||+||+++++++++++.+...|+.. + +.+++.. .....+++.+|.|.....+++++.+++ .
T Consensus 196 l~~P-----~G~g~l~v~~~~~~~~~p~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al--~ 262 (378)
T PRK03080 196 LGGE-----GGHGMAILSPRAVERLESYTPARPI-----P-KFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQL--D 262 (378)
T ss_pred CCCC-----CceEEEEECHHHHHhhhcccCCCCC-----c-hhheeccchHHhhhhhcCCcccCchHHHHHHHHHHH--H
Confidence 6544 6799999999998888666555321 1 1222211 011123456777766556777777776 6
Q ss_pred HhCcc-cHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC-C--Cc-cEEEEecCC-----HHHHHHHHHHcCceeee--c--
Q 001531 437 YHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-P--FF-DTVKVKCAD-----AHAIASAAYKIEMNLRV--V-- 502 (1058)
Q Consensus 437 ~~g~~-Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~-~--~~-~~v~i~~~~-----~~~l~~~L~~~GI~~~~--~-- 502 (1058)
++..+ |++++.+|+.+++++++++|+++|+++++.. + .. ..++|..++ ..++...|.++||.++. .
T Consensus 263 ~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~l~~~~i~v~~g~~~~ 342 (378)
T PRK03080 263 WANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQAAVDAAAVAKLLRENGAVDIEPYRD 342 (378)
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCchHHHHHHHHHHHHHcCCeeccccccC
Confidence 66676 8999999999999999999999975677631 1 12 245666553 34566777777887743 1
Q ss_pred cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 503 DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 503 ~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
..+.+|+|++.+||++||++++++|..
T Consensus 343 ~~~~vRis~~~~~t~~di~~l~~al~~ 369 (378)
T PRK03080 343 APNGLRIWCGPTVEPADVEALTPWLDW 369 (378)
T ss_pred CCCcEEEecCCCCCHHHHHHHHHHHHH
Confidence 247899999999999999999999963
No 82
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.85 E-value=1.2e-19 Score=203.26 Aligned_cols=320 Identities=21% Similarity=0.302 Sum_probs=225.1
Q ss_pred cccccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhC-CCceeeecCchHHHHHHHHHH
Q 001531 589 HSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMV 667 (1058)
Q Consensus 589 ~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G-~~~~~l~~~sGa~ge~a~lla 667 (1058)
.++..||+|++++..+...+. ..-...+ +-|.. +...++.+.|+++++ ++.+ |+.|||++++++++..
T Consensus 51 iav~~lGH~hP~iv~al~~Q~-~kl~h~s-n~~~~--------~~~~~la~~L~~~s~~~d~v-ff~NSGaEA~EaAiKl 119 (404)
T COG4992 51 IAVNNLGHCHPALVEALKEQA-EKLWHVS-NLFYN--------EPQAELAEKLVELSPFADRV-FFCNSGAEANEAALKL 119 (404)
T ss_pred eeeeccCCCCHHHHHHHHHHH-HHhhhcc-cccCC--------hHHHHHHHHHHhhCccccEE-EEcCCcHHHHHHHHHH
Confidence 456689999998887777763 2111111 11111 124478899999997 5554 7889999999999999
Q ss_pred HHHHHHHcCCCCCCEEEEcCCCCCccH---------HHHHhCC---cEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEE
Q 001531 668 IRAYHKARGDHHRNVCIIPVSAHGTNP---------ATAAMCG---MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLM 735 (1058)
Q Consensus 668 ir~y~~~~G~~~r~~Vlip~saHg~~p---------a~a~~~G---~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~ 735 (1058)
+|.|.. +.++...|-.-.+.||-.. ++.+.++ -.++.+|+ -|+++++++|+ ++|++|+
T Consensus 120 ARk~~~--~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpf-----nDi~al~~ai~---~~taAvi 189 (404)
T COG4992 120 ARKYTG--DPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPF-----NDIEALEAAID---EDTAAVI 189 (404)
T ss_pred HHHHcC--CCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCC-----CCHHHHHHHhc---cCeEEEE
Confidence 998853 2223333445788898543 3333222 02456776 59999999998 7999999
Q ss_pred EEcC-CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc--------CCcEEEeCCccccccCCCCCC
Q 001531 736 VTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGG 803 (1058)
Q Consensus 736 vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~--------GaDi~~~s~hKtf~~P~g~GG 803 (1058)
++.- ...|++.+ .++++.++|++||+++|+|++ |.|+.+.|++ -+||+++ .|.+ |+|
T Consensus 190 vEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEV----QtG~GRTGk~fA~e~~gV~PDI~tl--aK~L----gGG- 258 (404)
T COG4992 190 VEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEV----QTGLGRTGKLFAYEHYGVEPDILTL--AKAL----GGG- 258 (404)
T ss_pred EecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEecc----ccCCCccchHHHHHHhCCCCCEEEe--eccc----cCC-
Confidence 9863 57788752 589999999999999999999 6788899864 3799876 4766 344
Q ss_pred CceeEEEEeCCCCCCC-CCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHH
Q 001531 804 PGMGPIGVKKHLAPFL-PSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYM 882 (1058)
Q Consensus 804 Pg~G~i~~~~~l~~~l-pg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL 882 (1058)
-.+|.+.+++.....+ ||.. .+++.|+++.++++.+.+..+-++++.+.++ +...||
T Consensus 259 ~PigA~la~~~~~~~~~~G~H-------------------gSTfGGNpLacAv~~a~l~~l~~e~ll~~v~---~~g~~~ 316 (404)
T COG4992 259 FPIGAMLATEEIASAFTPGDH-------------------GSTFGGNPLACAVALAVLEVLLEEGLLENVR---EKGEYL 316 (404)
T ss_pred ccceeeEEchhhhhcCCCCcc-------------------cCCCCcCHHHHHHHHHHHHHHcchhHHHHHH---HHHHHH
Confidence 5577777775544432 3221 1236688999999999999999888766544 667899
Q ss_pred HHHHhcc---CCee--eccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHH
Q 001531 883 AKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEE 957 (1058)
Q Consensus 883 ~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~ee 957 (1058)
.++|+++ |++. +.|. | .+.-+.++. ...+.++.+.|.++|+.+.... ++.+|+.|+...|++|
T Consensus 317 ~~~L~~l~~~~~~v~~vRG~-G-LmiGiel~~-------~~~a~~~~~~~~~~gvL~~~a~---~~ViR~~PpL~i~~ee 384 (404)
T COG4992 317 LQRLRELKRRYPLVKEVRGR-G-LMIGIELKE-------PYRARDIVRALREEGVLVLPAG---PNVIRFLPPLVITEEE 384 (404)
T ss_pred HHHHHHHhhcCCceeeeecc-e-eEEEEEecC-------cccHHHHHHHHHHCCeEEecCC---CCeEEecCCccCCHHH
Confidence 9999875 4432 2231 2 222222221 1247899999999999876444 5799999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 001531 958 LDRYCDALISIREEIAQ 974 (1058)
Q Consensus 958 id~fi~aL~~i~~e~~~ 974 (1058)
||..+++|+++++....
T Consensus 385 i~~~~~~l~~~l~~~~~ 401 (404)
T COG4992 385 IDEALDALERALAAASA 401 (404)
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 99999999999876543
No 83
>PLN02271 serine hydroxymethyltransferase
Probab=99.85 E-value=2.5e-19 Score=209.52 Aligned_cols=352 Identities=17% Similarity=0.140 Sum_probs=231.3
Q ss_pred HhcCccCcCcccccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCCc----eeeecC
Q 001531 580 LQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDS----FSLQPN 655 (1058)
Q Consensus 580 l~~~~~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~~----~~l~~~ 655 (1058)
++++|+.....+-.+||+- .|.+.+..|-.+ |+.. .+-..++..-.++...+++|.+. ++++|.
T Consensus 154 IASEN~~S~av~~algS~l--tnkYaEG~pG~R-----yy~G-----~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~ 221 (586)
T PLN02271 154 IASENFVCRAVMEALGSHL--TNKYSEGMPGAR-----YYTG-----NQYIDQIERLCCERALAAFGLDSEKWGVNVQPY 221 (586)
T ss_pred ccccccCCHHHHHHhcCcc--cccCCCCCCCCc-----CCCC-----ChhHHHHHHHHHHHHHHHhCCcccccccceeec
Confidence 4566654333344566642 244555543221 1111 11122444445678888999886 789999
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHH---------HHhCCcEEEEEc--CC-CCCCCCHHHHHHH
Q 001531 656 AGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---------AAMCGMKIVSVG--TD-AKGNINIEELRKA 723 (1058)
Q Consensus 656 sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~---------a~~~G~~vv~V~--~d-~~g~iD~e~L~~~ 723 (1058)
||+.|+.++++++. .++|+|+..+..||.|... +...|+.+..++ +| ++|.+|+++|++.
T Consensus 222 SGs~AN~aV~~ALl--------~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~ 293 (586)
T PLN02271 222 SCTSANFAVYTGLL--------LPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEK 293 (586)
T ss_pred cHHHHHHHHHHHhc--------CCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHH
Confidence 99999988777663 3678999888888877543 234565444444 65 4599999999996
Q ss_pred HHhcCCCeEEEEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCcccccCc---CCCCccCCcEEEeCCccccccCCC
Q 001531 724 AEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL---TSPGYIGADVCHLNLHKTFCIPHG 800 (1058)
Q Consensus 724 i~~~~~~taaV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl---~~pg~~GaDi~~~s~hKtf~~P~g 800 (1058)
+.+ .++++|++..-.+.-.+ |+++|+++|+++|+++++|++|..++... ..|.. ++|+++++.||||
T Consensus 294 a~~--~rPKLII~g~Saypr~~--D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~-~aDvvt~TTHKtL----- 363 (586)
T PLN02271 294 ALD--FRPKILICGGSSYPREW--DYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFD-YCDIVTSTTHKSL----- 363 (586)
T ss_pred hhh--cCCeEEEECchhccCcC--CHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCc-CCcEEEeCCcccC-----
Confidence 542 78888888664443222 79999999999999999999997655432 23433 6999999999999
Q ss_pred CCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCC----CCCC-CCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHH
Q 001531 801 GGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPE----KSQP-LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIA 875 (1058)
Q Consensus 801 ~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~----~~~~-t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~ 875 (1058)
.||..|+|.++++..+...|...++..+.-.+. -.++ .+.+.+.+..+. +++.|.+ +.......+++.+++.
T Consensus 364 -rGPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~-IAalAva-lkea~~~efk~Ya~QV 440 (586)
T PLN02271 364 -RGPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNH-IAALAIA-LKQVATPEYKAYMQQV 440 (586)
T ss_pred -CCCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHH-HHHHHHH-HHHHhChHHHHHHHHH
Confidence 478668999987766655555433321100000 0011 122222222222 3333333 3333344568999999
Q ss_pred HHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCC--C---C-CCCEEEEE
Q 001531 876 ILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS--W---P-VPGTLMIE 948 (1058)
Q Consensus 876 ~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~--~---p-~~~~Lris 948 (1058)
++||+.|++.|.+. |+++.. ++..|.+++|+++ .|++...+.+.|.+.||.++... + | .++.+||.
T Consensus 441 v~NAkaLA~~L~~~G~~vv~g---gTdnHlvLvDl~~----~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiG 513 (586)
T PLN02271 441 KKNAQALASALLRRKCRLVTG---GTDNHLLLWDLTT----LGLTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIG 513 (586)
T ss_pred HHHHHHHHHHHHHCCCeEeeC---CCCcceeeecCcc----cCCCHHHHHHHHHHcCeEeccccCCCCCCCCCCCccccc
Confidence 99999999999775 888753 3556889999875 36788999999999999875422 2 1 35779998
Q ss_pred cCCCCC----HHHHHHHHHHHHHHHHH
Q 001531 949 PTESES----KEELDRYCDALISIREE 971 (1058)
Q Consensus 949 ~te~~t----~eeid~fi~aL~~i~~e 971 (1058)
..+.++ ++|++.+.+.+.++++.
T Consensus 514 T~alT~rG~~e~d~~~iA~~i~~~~~~ 540 (586)
T PLN02271 514 TPAMTSRGCLESDFETIADFLLRAAQI 540 (586)
T ss_pred CHHHHhcCCCcHHHHHHHHHHHHHHhh
Confidence 877554 57888888888887763
No 84
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.85 E-value=2.1e-19 Score=211.27 Aligned_cols=295 Identities=14% Similarity=0.175 Sum_probs=189.6
Q ss_pred HHhCCCcee-eecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHH----HHHhCCcEE----EEEcCCCCC
Q 001531 643 TITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKI----VSVGTDAKG 713 (1058)
Q Consensus 643 el~G~~~~~-l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa----~a~~~G~~v----v~V~~d~~g 713 (1058)
+++|.+... +...+++.+. .++++.+. .+|. ++++|+++...|+++.. .++..|+++ +.++.+.+|
T Consensus 80 ~l~g~~~~~v~~~~~~t~~l---~~~~~~~~-~~~~-~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g 154 (406)
T TIGR01814 80 RLVGAKEDEVVVMNTLTINL---HLLLASFY-KPTP-KRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEE 154 (406)
T ss_pred cccCCCCCcEEEeCCchHHH---HHHHHHhc-CCcC-CccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCC
Confidence 789987643 3333444443 22233321 1221 23468887777876433 245678887 567776678
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEEeCCc
Q 001531 714 NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLH 792 (1058)
Q Consensus 714 ~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~~s~h 792 (1058)
.+|++++++.+++.+++|++|++++++ .+|.+. |+++|+++||++|+++++|++|..+...+ ...++|+|++++++|
T Consensus 155 ~~~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~-~~~~i~~~~~~~g~~~~vD~aq~~G~~~i-d~~~~gvD~~~~s~h 232 (406)
T TIGR01814 155 TLRLEDILDTIEKNGDDIAVILLSGVQYYTGQLF-DMAAITRAAHAKGALVGFDLAHAVGNVPL-DLHDWGVDFACWCTY 232 (406)
T ss_pred ccCHHHHHHHHHhcCCCeEEEEEeccccccceec-CHHHHHHHHHHcCCEEEEEcccccCCccc-ccccCCCCEEEEcCc
Confidence 899999999987555789999999986 579998 79999999999999999999986544332 234689999999999
Q ss_pred cccccCCCCCCCceeEEEEeC-CCCCCCCCCCcccCCC-----C------C--CCCCCCCCCCCCccchhhHHHHHHHHH
Q 001531 793 KTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGG-----I------P--APEKSQPLGTIAAAPWGSALILPISYT 858 (1058)
Q Consensus 793 Ktf~~P~g~GGPg~G~i~~~~-~l~~~lpg~~vg~~~d-----~------g--~~~~~~~t~~i~sa~~g~~~~~~~a~a 858 (1058)
|||+ |||| |.+++.+ .+....| ...|+... + + ..+.+.+|.++. .+....+
T Consensus 233 K~l~-----g~pG-~~l~v~~~~~~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~--------~~~~l~~ 297 (406)
T TIGR01814 233 KYLN-----AGPG-AGAFVHEKHAHTERP-RLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPIL--------SVAALRG 297 (406)
T ss_pred cccC-----CCCC-eEEEEehhhhhhcCC-CCCcccCCCCccccccccccCCCccceeeCCccHH--------HHHHHHH
Confidence 9984 5677 5555543 3222222 11221110 0 0 000111222221 1222233
Q ss_pred HHHHHchhhHHHHHHHHHHHHHHHHHHHhccCC----eeeccCCCc--cceEEEEecccccccCCCCHHHHHHHHHHCCc
Q 001531 859 YIAMMGSKGLTEASKIAILNANYMAKRLEKHYP----ILFRGVNGT--VAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 932 (1058)
Q Consensus 859 ~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~----v~~~g~~~~--~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi 932 (1058)
.+..+...|+.++.++....++|+.+.|++... +...++..+ ..+.+.|.++ ++..++.++|.++||
T Consensus 298 al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-------~~~~~~~~~L~~~gi 370 (406)
T TIGR01814 298 SLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-------VPGKAVFQALIKRGV 370 (406)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-------CCHHHHHHHHHHCCE
Confidence 455555667888888888999999999977421 321122111 1122344432 357899999999999
Q ss_pred cccCCCCCCCCEEEEEc-CCCCCHHHHHHHHHHHHHHH
Q 001531 933 HGPTMSWPVPGTLMIEP-TESESKEELDRYCDALISIR 969 (1058)
Q Consensus 933 ~~~~~~~p~~~~Lris~-te~~t~eeid~fi~aL~~i~ 969 (1058)
.+... .++.+||++ +.++|++|||+++++|++++
T Consensus 371 ~v~~~---~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 371 IGDKR---EPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred EEecc---CCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 86421 247899999 57999999999999998764
No 85
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.85 E-value=2e-19 Score=207.47 Aligned_cols=295 Identities=16% Similarity=0.083 Sum_probs=206.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCcc-eEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC
Q 001531 209 RLESLLNFQTMIADLTGLPMSN-ASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD 287 (1058)
Q Consensus 209 ~l~~l~e~q~~ia~L~G~~~an-asl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~ 287 (1058)
..+.+.++++.+++++|.+..+ +.++.++|.+...++.++. ++|++|+++...|++.. +...++..|.+++.++
T Consensus 30 ~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~---~~g~~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~ 104 (356)
T cd06451 30 FLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLL---EPGDKVLVGVNGVFGDR--WADMAERYGADVDVVE 104 (356)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhC---CCCCEEEEecCCchhHH--HHHHHHHhCCCeEEee
Confidence 4466788899999999996544 5566777877766666652 37999999988887631 1122344577777765
Q ss_pred c--------hhhhc-cCC-CEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCC-CCCCcccceEEEec
Q 001531 288 L--------KDIDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVGS 355 (1058)
Q Consensus 288 ~--------~~l~~-l~~-~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l-~~p~~~GaDivvgs 355 (1058)
. +++++ +++ ++++|++++| |.+|.+.|+++|+++||++|+++++|+ .+++|.. .+..++|+|+++++
T Consensus 105 ~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~-~~~~g~~~~~~~~~~~d~~~~s 183 (356)
T cd06451 105 KPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDA-VSSLGGEPFRMDEWGVDVAYTG 183 (356)
T ss_pred cCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEee-ehhccCccccccccCccEEEec
Confidence 3 35555 665 8899999887 679999999999999999999999953 4566643 34567899999998
Q ss_pred C-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccc--c-ccccCCCccchhHHHHHHH
Q 001531 356 A-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHI--R-RDKATSNICTAQALLANMA 431 (1058)
Q Consensus 356 ~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~i--r-RekaTsni~t~~~l~a~~A 431 (1058)
+ |+|+.| ++.|++++++++.+.+.. + .+..++.+.++...+.. + .+.+|.|+ ..++++.+
T Consensus 184 ~~K~l~~p-----~g~G~l~~~~~~~~~~~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~t~~~---~~~~a~~a 247 (356)
T cd06451 184 SQKALGAP-----PGLGPIAFSERALERIKK---K-----TKPKGFYFDLLLLLKYWGEGYSYPHTPPV---NLLYALRE 247 (356)
T ss_pred CchhccCC-----CCcceeEECHHHHHHHHh---c-----CCCCceeecHHHHHhhhcccCCCCCCChH---HHHHHHHH
Confidence 8 778655 357899999988776631 0 00111222221111111 1 12233332 34555656
Q ss_pred HHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEE-EEecC-C--HHHHHHHHHHc-Cceeeec--
Q 001531 432 AMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTV-KVKCA-D--AHAIASAAYKI-EMNLRVV-- 502 (1058)
Q Consensus 432 a~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~--~~~~~v-~i~~~-~--~~~l~~~L~~~-GI~~~~~-- 502 (1058)
++ .++..+|++++.++..++++++++.|.++| +++..+ .+...+ .+..+ + ..++++.|.++ ||.+...
T Consensus 248 al--~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gI~~~~g~~ 324 (356)
T cd06451 248 AL--DLILEEGLENRWARHRRLAKALREGLEALG-LKLLAKPELRSPTVTAVLVPEGVDGDEVVRRLMKRYNIEIAGGLG 324 (356)
T ss_pred HH--HHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CeeccCcccCCCceEEEECCCCCCHHHHHHHHHHhCCEEEecccc
Confidence 65 556667999999999999999999999987 888742 223333 23443 2 78899999998 9988642
Q ss_pred --cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001531 503 --DSNTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 503 --~~~~lris~~~~~t~edid~ll~al~ 528 (1058)
.++.+|+|++.++|++|+++++++|.
T Consensus 325 ~~~~~~iRis~~~~~~~e~v~~~~~~l~ 352 (356)
T cd06451 325 PTAGKVFRIGHMGEATREDVLGVLSALE 352 (356)
T ss_pred cccCCEEEEecCCCCCHHHHHHHHHHHH
Confidence 24689999999999999999999986
No 86
>PRK02769 histidine decarboxylase; Provisional
Probab=99.85 E-value=5.8e-19 Score=204.41 Aligned_cols=280 Identities=18% Similarity=0.141 Sum_probs=198.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcc--eEeecchHHHHHHHHH-HhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 001531 208 GRLESLLNFQTMIADLTGLPMSN--ASLLDEGTAAAEAMAM-CNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1058)
Q Consensus 208 G~l~~l~e~q~~ia~L~G~~~an--asl~~~~Taa~ea~~~-a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~ 284 (1058)
++.+...+..+++|+|+|++... ..++.|||.++...+. ++.+ .++++|++++.+|+++.+.++.+ |++.+
T Consensus 62 ~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~--~~~~~ii~s~~~H~Sv~ka~~~l----g~~~~ 135 (380)
T PRK02769 62 NSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLAREL--FPDGTLYYSKDTHYSVSKIARLL----RIKSR 135 (380)
T ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHh--CCCcEEEeCCCceehHHHHHHHc----CCCCc
Confidence 45667778889999999997544 4677888866443222 2222 26789999999999999988653 33333
Q ss_pred Ee--------Cchhhhc-cCCC---EeEEEEEcC-CCceeeccHHHHHHHHHhcC---cEEEEEeccccccCCC------
Q 001531 285 VS--------DLKDIDY-KSGD---VCGVLVQYP-GTEGEVLDYGDFIKNAHANG---VKVVMATDLLALTILK------ 342 (1058)
Q Consensus 285 ~v--------~~~~l~~-l~~~---t~~V~v~~p-n~~G~i~dl~~I~~~a~~~g---alliV~a~~~slg~l~------ 342 (1058)
.+ |+++|++ ++++ |.+|+++++ |.+|.++|+++|+++||++| ++++||+ .++.+.+.
T Consensus 136 ~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDa-A~gg~~~p~~~~~~ 214 (380)
T PRK02769 136 VITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADA-ALSGMILPFVNNPP 214 (380)
T ss_pred eeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEe-cccceeecccCccc
Confidence 32 3356666 6555 888999887 68999999999999999998 6999954 33444332
Q ss_pred -CCCcccceEEEecCccc-ccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCc
Q 001531 343 -PPGELGADIVVGSAQRF-GVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNI 420 (1058)
Q Consensus 343 -~p~~~GaDivvgs~k~l-g~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni 420 (1058)
-....|+|.++.++++| ++|+ +.|++++++++.+.+.... .|.- ..+. -..||.|.
T Consensus 215 ~~d~~~~vDsis~s~HK~~~~P~-----g~G~l~~r~~~~~~~~~~~-----------~yl~---~~d~---t~~GSR~g 272 (380)
T PRK02769 215 PFSFADGIDSIAISGHKFIGSPM-----PCGIVLAKKKYVERISVDV-----------DYIG---SRDQ---TISGSRNG 272 (380)
T ss_pred cCCccCCCCEEEECCcccCCCCC-----CcEEEEEehhhhhhcccCc-----------cccC---CCCC---CccCCCCc
Confidence 11223999999999544 4464 3678999988777663210 0110 0000 12456665
Q ss_pred cchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCCHHHHHHHHHHcCceee
Q 001531 421 CTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLR 500 (1058)
Q Consensus 421 ~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~~~~l~~~L~~~GI~~~ 500 (1058)
.+.. ++-++ +.++|.+|++++.+++.++++|+.++|++.| ++++..|...+|+|..+.. ++. +|+.+.
T Consensus 273 ~~~l---~lw~a--L~~lg~~G~~~~~~~~~~la~~l~~~L~~~g-~~~~~~p~~~~v~f~~~~~-~~~-----~~w~l~ 340 (380)
T PRK02769 273 HTAL---LLWAA--IRSLGSKGLRQRVQHCLDMAQYAVDRLQANG-IPAWRNPNSITVVFPCPSE-RIW-----KKWHLA 340 (380)
T ss_pred HHHH---HHHHH--HHHHCHHHHHHHHHHHHHHHHHHHHHHHhCC-CEEEcCCCceEEEEcCCCH-HHH-----hCeeEc
Confidence 3322 33333 4789999999999999999999999999987 9988777777888876542 221 688887
Q ss_pred eccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 501 VVDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 501 ~~~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
.. .+.++++++..+|++.+|.|++.|..
T Consensus 341 ~~-~~~~hi~~~~~~~~~~~~~f~~dl~~ 368 (380)
T PRK02769 341 TS-GNQAHIITMPHHNKQQIDSLIDELIF 368 (380)
T ss_pred cc-CCEEEEEECCCCCHHHHHHHHHHHHH
Confidence 65 45899999999999999999999864
No 87
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.84 E-value=6.6e-19 Score=205.69 Aligned_cols=305 Identities=16% Similarity=0.176 Sum_probs=194.3
Q ss_pred HHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcC--C
Q 001531 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGT--D 710 (1058)
Q Consensus 633 ~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~--d 710 (1058)
.+.++++.+++++|.+.+.+ .+++++|..++ ++.+. .++++|+++...|.+....+...|++++.++. +
T Consensus 64 ~~~~l~~~lA~~~g~~~~~~-~~g~t~a~~~a---l~~l~-----~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~ 134 (387)
T PRK09331 64 PIADFHEDLAEFLGMDEARV-THGAREGKFAV---MHSLC-----KKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGY 134 (387)
T ss_pred HHHHHHHHHHHHhCCCcEEE-eCCHHHHHHHH---HHHhc-----CCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccC
Confidence 46789999999999987644 55666555433 33321 25678999988887666567889999999998 6
Q ss_pred CCCCCCHHHHHHHHHhc----CCCeEEEEEEcCCC-cccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCc
Q 001531 711 AKGNINIEELRKAAEAN----RDNLSTLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 785 (1058)
Q Consensus 711 ~~g~iD~e~L~~~i~~~----~~~taaV~vt~Pn~-~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaD 785 (1058)
+++.+|+++++++++++ .+++++|++++|++ +|.+. |+++|+++||++|+++++|+++..+..++ ...++|+|
T Consensus 135 ~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~-~l~~I~~la~~~g~~livD~a~~~g~~~~-~~~~~g~D 212 (387)
T PRK09331 135 PEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLA-DAKKVAKVAHEYGIPFLLNGAYTVGRMPV-DGKKLGAD 212 (387)
T ss_pred cCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccc-cHHHHHHHHHHcCCEEEEECCcccCCcCC-CHHHcCCC
Confidence 77889999999999743 24789999999974 89998 79999999999999999999975332222 22357999
Q ss_pred EEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCC-CCCccchhhHHHHHHHHHHHHHHc
Q 001531 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLG-TIAAAPWGSALILPISYTYIAMMG 864 (1058)
Q Consensus 786 i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~-~i~sa~~g~~~~~~~a~a~l~~lG 864 (1058)
++++++||+|+ +++|+|++++++++.+.+...... +... .....+ +... .... .+++.+..+-
T Consensus 213 ~~~~s~~K~l~-----~~~~~G~l~~~~~~i~~~~~~~~~----~~~~-~~~~~~~~~~~----~~~~--~~~aal~~~~ 276 (387)
T PRK09331 213 FIVGSGHKSMA-----ASAPSGVLATTEEYADKVFRTSRK----FGVK-EVELLGCTLRG----APLV--TLMASFPHVV 276 (387)
T ss_pred EEEeeCccccc-----CCCCEEEEEECHHHHhhcccccCC----Cccc-ceeeeceecCc----hHHH--HHHHHHHHHH
Confidence 99999999995 446799999988765544211000 0000 000000 1110 1111 1111122211
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCccceEEEEeccccc---ccCCCCHHHHHHHHHHCCccccCCCC
Q 001531 865 SKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLK---NTAGIEPEDVAKRLMDYGFHGPTMSW 939 (1058)
Q Consensus 865 ~eGl~~~a~~~~~~a~yL~~~L~~~--~~v~~~g~~~~~~~e~vv~~~~~~---~~~g~~~~~v~k~L~~~Gi~~~~~~~ 939 (1058)
.. + +..++...++++++++|+++ +++.-.++ ...+.+.++.+.+. ...+.++..+.++|.++||..-.
T Consensus 277 ~~-~-~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~--- 349 (387)
T PRK09331 277 ER-V-KRWDEEVKKARWFVDELEKIEGFKQLGEKP--RNHDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHGIK--- 349 (387)
T ss_pred HH-H-HHHHHHHHHHHHHHHHHhcCCCEEEeccCc--CcCCeEEEeCCchhHHhhhccccchhHHHHHHHcCceEEc---
Confidence 11 1 23344567888999999876 44431111 11112234543210 01123456799999999997311
Q ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 940 PVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 940 p~~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
+..+.++...+..+|++|+++++++|++++++
T Consensus 350 ~~~~~i~ri~~~g~t~~di~~l~~aL~~i~~~ 381 (387)
T PRK09331 350 PGATKEFKLSTYGLTWEQVEYVADAFKEIAEK 381 (387)
T ss_pred cCCceEEEEEeccCCHHHHHHHHHHHHHHHHh
Confidence 22234444444447899999999999998665
No 88
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.84 E-value=2.4e-19 Score=209.70 Aligned_cols=312 Identities=14% Similarity=0.166 Sum_probs=211.1
Q ss_pred ccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHH
Q 001531 168 KSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMC 247 (1058)
Q Consensus 168 ~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a 247 (1058)
.+|+|.+..|..+.+.+. .+.+ |.+.|++ +....|+.+.+.++++.+|+++|.+. +.++.+|+.+..+++.+
T Consensus 46 ~~~lg~~~~~~v~~~~~~-~~~~---~~~~~~~--s~~~~G~~~~~~~le~~ia~~~g~~~--~ii~~~~~~a~~~~~~~ 117 (393)
T TIGR01822 46 NNYLGLSSHPDLIQAAKD-ALDE---HGFGMSS--VRFICGTQDIHKELEAKIAAFLGTED--TILYASCFDANGGLFET 117 (393)
T ss_pred CCccccCCCHHHHHHHHH-HHHH---hCCCCCC--cCcccCChHHHHHHHHHHHHHhCCCc--EEEECchHHHHHHHHHH
Confidence 356666655444444442 3322 2234443 23445888888999999999999864 77889999887877766
Q ss_pred hccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhhc-cCC------CEeEEEEEcC-CCceeeccHHHHH
Q 001531 248 NNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-KSG------DVCGVLVQYP-GTEGEVLDYGDFI 319 (1058)
Q Consensus 248 ~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~~l~~-l~~------~t~~V~v~~p-n~~G~i~dl~~I~ 319 (1058)
+ . ++||+|+++...|+++...++. ++..++.+..++++++++ +.+ ++++|++.++ |++|.+.|+++|+
T Consensus 118 l-~--~~gd~vi~~~~~~~s~~~~~~~-~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~ 193 (393)
T TIGR01822 118 L-L--GAEDAIISDALNHASIIDGVRL-CKAKRYRYANNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEIC 193 (393)
T ss_pred h-C--CCCCEEEEeccccHHHHHHHHh-cCCceEEeCCCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHH
Confidence 6 3 3899999999999999988753 444455555577788776 532 6777777765 7899999999999
Q ss_pred HHHHhcCcEEEEEeccccccCCCCCC---------cccceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEe
Q 001531 320 KNAHANGVKVVMATDLLALTILKPPG---------ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVG 389 (1058)
Q Consensus 320 ~~a~~~galliV~a~~~slg~l~~p~---------~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG 389 (1058)
++||++|+++++| +.+++|.+...+ ..++|++++|. |.|+ |+.+|++++++++.+.+...
T Consensus 194 ~la~~~~~~li~D-e~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~------g~r~G~~~~~~~~~~~l~~~--- 263 (393)
T TIGR01822 194 DLADKYDALVMVD-ECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALG------GASGGFTTARKEVVELLRQR--- 263 (393)
T ss_pred HHHHHcCCEEEEE-CCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhh------CCCcEEEEeCHHHHHHHHHh---
Confidence 9999999999994 455666543211 12689999998 7664 34568999988777655110
Q ss_pred eeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 001531 390 VSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEV 469 (1058)
Q Consensus 390 ~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l 469 (1058)
...+.. .+|.+ .....+..+++ ..+ ++.+++.++..++.+++.+.|++.| +++
T Consensus 264 -------~~~~~~------------~~~~~---~~~~~a~~~al--~~~--~~~~~~~~~~~~~~~~l~~~L~~~g-~~~ 316 (393)
T TIGR01822 264 -------SRPYLF------------SNSLP---PAVVGASIKVL--EML--EASNELRDRLWANTRYFRERMEAAG-FDI 316 (393)
T ss_pred -------Ccccee------------cCCCC---HHHHHHHHHHH--HHH--hcCHHHHHHHHHHHHHHHHHHHHcC-CCC
Confidence 000100 11111 12222333332 332 3456788899999999999999887 776
Q ss_pred cCCCCccEEEEecCC---HHHHHHHHHHcCceeeec-------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 470 QGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 470 ~~~~~~~~v~i~~~~---~~~l~~~L~~~GI~~~~~-------~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
.... ...+.+..++ +.++.+.|.++||.+... ....+|+|++.++|++||++++++|..
T Consensus 317 ~~~~-~~~~~i~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~ 385 (393)
T TIGR01822 317 KPAD-HPIIPVMLYDAVLAQRFARRLLEEGIYVTGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTR 385 (393)
T ss_pred CCCC-CCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 5321 2233444333 678999999999987521 124699999999999999999999963
No 89
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.84 E-value=8.6e-19 Score=203.55 Aligned_cols=306 Identities=14% Similarity=0.134 Sum_probs=195.9
Q ss_pred HHHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCC
Q 001531 631 QEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD 710 (1058)
Q Consensus 631 ~~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d 710 (1058)
.....++++.+++++|++.+.+ .++|.++..+++.++. +++++|+++...|.+....+++.|++++.++.+
T Consensus 50 ~~~~~~~~e~lA~~~g~~~~~i-~~g~~~a~~~~~~~l~--------~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~ 120 (370)
T TIGR02539 50 KPPIHDFLEDLAEFLGMDEARV-THGAREGKFAVMHALC--------KEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHT 120 (370)
T ss_pred chHHHHHHHHHHHHhCCCceEE-ECChHHHHHHHHHHhh--------CCCCEEEECCcccHHHHHHHHHcCCEEEEEecC
Confidence 3346677888999999997655 4667666644444331 246789998877766655678899999999986
Q ss_pred C--CCCCCHHHHHHHHHhc----CCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCC-Ccc
Q 001531 711 A--KGNINIEELRKAAEAN----RDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP-GYI 782 (1058)
Q Consensus 711 ~--~g~iD~e~L~~~i~~~----~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~p-g~~ 782 (1058)
. ++.+|+++|++++++. .+++++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+ .+..+ ..+
T Consensus 121 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~-~l~~i~~la~~~~~~livDea~~~g--~~~~~~~~~ 197 (370)
T TIGR02539 121 GHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLP-DAGKVAKVCREKGVPLLLNCAYTVG--RMPVSAKEI 197 (370)
T ss_pred CcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCcccc-CHHHHHHHHHHcCCeEEEECccccC--CcCCCHHHc
Confidence 3 4789999999999632 1367889999995 689988 7999999999999999999997643 22222 356
Q ss_pred CCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHH
Q 001531 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 862 (1058)
Q Consensus 783 GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~ 862 (1058)
+.|+++.++||+|+. | .++|++++++++.+.+......+. .........++. ..+ +..+++.+..
T Consensus 198 ~~di~v~s~sK~~~~----~-g~~G~l~~~~~~i~~l~~~~~~~~-------~~~~~~~~~~~~-~~~--~~~~~~al~~ 262 (370)
T TIGR02539 198 GADFIVGSGHKSMAA----S-GPCGVLGMSEEWEDIVLRKSRYSP-------VKEVELLGCTSR-GAP--IVTMMASFPH 262 (370)
T ss_pred CCCEEEeeCcccccC----C-CCEEEEEECHHHHhhhcccccCCc-------cceeeeeccccc-ccH--HHHHHHHHHH
Confidence 899999999999961 2 248999999877766532110000 000000001100 011 1112222221
Q ss_pred HchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccc---cCCCCHHHHHHHHHHCCcc-ccCC
Q 001531 863 MGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKN---TAGIEPEDVAKRLMDYGFH-GPTM 937 (1058)
Q Consensus 863 lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~---~~g~~~~~v~k~L~~~Gi~-~~~~ 937 (1058)
. .+.+.+ .++...++++|+++|++. +++....+ ...+-+.++++.+.. ....+...+.++|.++||. +.
T Consensus 263 ~-~~~l~~-~~~~~~~~~~l~~~L~~~g~~~~~~~~--s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir-- 336 (370)
T TIGR02539 263 V-VERVKR-WDEEVKKTRWFVAELEDIGFIQLGQKP--KEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIR-- 336 (370)
T ss_pred H-HHHHHH-HHHHHHHHHHHHHHHHhCCcEEEccCC--CcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCcccc--
Confidence 1 222222 334456678999999886 55421111 112223455432100 0012346799999999997 32
Q ss_pred CCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 938 SWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 938 ~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
++..+.+||++. ..|++|+++++++|++++++
T Consensus 337 -~~~~~~iRis~~-~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 337 -SGQTKYFKLSVY-GLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred -CCcceEEEEEec-CCCHHHHHHHHHHHHHHHHh
Confidence 233568999974 57999999999999988654
No 90
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.84 E-value=9.8e-19 Score=202.41 Aligned_cols=317 Identities=12% Similarity=0.093 Sum_probs=200.7
Q ss_pred HHHHHHHHHHHHHHHhCCCc---eeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCcc-HHHHHhCCcEEE
Q 001531 630 YQEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTN-PATAAMCGMKIV 705 (1058)
Q Consensus 630 ~~~~~~el~~~lael~G~~~---~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~-pa~a~~~G~~vv 705 (1058)
..+.+.++++.+++++|.+. ..+.+.+|++|..+++.++. .+ +++.|++....|+.. ...++..|++++
T Consensus 33 ~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~----~~---~~~vlv~~~~~~~~~~~~~a~~~g~~~~ 105 (363)
T TIGR02326 33 YNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAV----PK---DGKLLVVINGAYGARIVQIAEYLGIPHH 105 (363)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcC----CC---CCeEEEEeCChhhHHHHHHHHHcCCceE
Confidence 45678899999999999974 23455666766644443331 11 223344455555443 234678999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcC-CCCccC
Q 001531 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGYIG 783 (1058)
Q Consensus 706 ~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~-~pg~~G 783 (1058)
.+++++++.+|+++++++++++ +++..|.++++ |.+|+.. |+++|+++||++|+++++|+++. ++... ...+++
T Consensus 106 ~v~~~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~-~i~~I~~l~~~~g~~livD~~~~--~g~~~~~~~~~~ 181 (363)
T TIGR02326 106 VVDTGEVEPPDVVEVEAILAAD-PAITHIALVHCETTTGILN-PIEAVAKLAHRHGKVTIVDAMSS--FGGIPIDIAELH 181 (363)
T ss_pred EEeCCCCCCCCHHHHHHHHhhC-CCccEEEEEeecCCccccC-cHHHHHHHHHHcCCEEEEEcccc--ccCcccchhhcC
Confidence 9999888899999999999742 35566767765 5689998 79999999999999999999864 33321 224679
Q ss_pred CcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCC----CCCCCCCCCCCCCCccchhhHHHHHHHHHH
Q 001531 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGG----IPAPEKSQPLGTIAAAPWGSALILPISYTY 859 (1058)
Q Consensus 784 aDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d----~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~ 859 (1058)
+|++++++||+|+ |+||+|+++++++....+.+...+...+ +.......+......+ ... ..+....
T Consensus 182 ~D~~~~s~~K~l~-----~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~---~~~-~~al~~a 252 (363)
T TIGR02326 182 IDYLISSANKCIQ-----GVPGFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSP---THV-VHAFAQA 252 (363)
T ss_pred ccEEEecCccccc-----cCCcceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCc---HHH-HHHHHHH
Confidence 9999999999994 5568999999876554432111110000 0000000000011111 111 1122233
Q ss_pred HHHHchh-hHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCC
Q 001531 860 IAMMGSK-GLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 937 (1058)
Q Consensus 860 l~~lG~e-Gl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~ 937 (1058)
+..+..+ |+.++.++...+++++.+.|++. +++... +.........+.++. ....+..++.+.|.++||.+...
T Consensus 253 l~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~v~~~L~~~gi~v~~g 328 (363)
T TIGR02326 253 LLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPLLD-DEIQSPIITSFYSPE---DPDYRFADFYQRLKEQGFVIYPG 328 (363)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccC-cccCCceEEEEECCC---CCCCCHHHHHHHHHHCCEEEECC
Confidence 4444344 57777788889999999999875 544321 100111112344431 00246788999999999987432
Q ss_pred CCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001531 938 SWPVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1058)
Q Consensus 938 ~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~ 970 (1058)
..+..+.+||++...++.+|+++++++|++++.
T Consensus 329 ~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 329 KVSQVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred cCCCCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 211247899998777899999999999988753
No 91
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.84 E-value=7.5e-19 Score=206.12 Aligned_cols=319 Identities=10% Similarity=0.025 Sum_probs=212.5
Q ss_pred cHHHHHHHHHHHHHHHhCCCc--eeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccH--HHHHhCCcEE
Q 001531 629 GYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP--ATAAMCGMKI 704 (1058)
Q Consensus 629 G~~~~~~el~~~lael~G~~~--~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~p--a~a~~~G~~v 704 (1058)
+..+++.++++++++++|.+. ..+.+++|+++.+ +++... ..++++||+++..|..+. ..++..|+++
T Consensus 39 ~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~---~a~~~~-----~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v 110 (401)
T PLN02409 39 AFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWE---SALTNT-----LSPGDKVVSFRIGQFSLLWIDQMQRLNFDV 110 (401)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHH---HHHHhc-----CCCCCEEEEeCCCchhHHHHHHHHHcCCce
Confidence 456678899999999999874 3466666655443 233221 135688999886664443 3366789999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcC-CCeEEEEEEcC-CCcccccccHHHHHHH--HHHcCCEEEEeccCcccccCc-CCC
Q 001531 705 VSVGTDAKGNINIEELRKAAEANR-DNLSTLMVTYP-STHGVYEEGIDEICKI--IHDNGGQVYMDGANMNAQVGL-TSP 779 (1058)
Q Consensus 705 v~V~~d~~g~iD~e~L~~~i~~~~-~~taaV~vt~P-n~~G~i~~dI~eI~~l--ah~~g~lv~vD~a~~~al~gl-~~p 779 (1058)
+.++.+.++.+|+++|++++++.. +++++|+++++ |.+|++. |+++|+++ ||++|+++++|+++.. +.. ...
T Consensus 111 ~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~-~~~~i~~l~~~~~~g~~~vvD~v~s~--g~~~id~ 187 (401)
T PLN02409 111 DVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTN-DLAGVRKLLDCAQHPALLLVDGVSSI--GALDFRM 187 (401)
T ss_pred EEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccC-CHHHHHHHHhhhccCcEEEEEccccc--CCccccc
Confidence 999998766799999999997321 27899999987 4789998 79999999 9999999999998753 222 123
Q ss_pred CccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCC-CCcccCCCCCC--CCCCCCCC-CCCccchhhHHHHHH
Q 001531 780 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPS-HPVVSTGGIPA--PEKSQPLG-TIAAAPWGSALILPI 855 (1058)
Q Consensus 780 g~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg-~~vg~~~d~g~--~~~~~~t~-~i~sa~~g~~~~~~~ 855 (1058)
.++|+|+++.+.||||+. .||+|++++++++.+.+.. .......+|.. ...+.+.. ..+. +.....+
T Consensus 188 ~~~~~D~~~~s~~K~l~~-----P~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp----~~~~~~a 258 (401)
T PLN02409 188 DEWGVDVALTGSQKALSL-----PTGLGIVCASPKALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTP----SIQLLYG 258 (401)
T ss_pred cccCccEEEEcCccccCc-----CCCcceeEECHHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCc----cHHHHHH
Confidence 568999999999999963 3579999999766544321 10000001100 00000000 1111 1111122
Q ss_pred HHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHH-HCCcc
Q 001531 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFH 933 (1058)
Q Consensus 856 a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~-~~Gi~ 933 (1058)
....+..+..+|+.++.++...+++++.+.|++. +++..+.+..+......+.++ .+++..++.++|. ++||.
T Consensus 259 l~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~~~~p-----~~~~~~~l~~~l~~~~~i~ 333 (401)
T PLN02409 259 LRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTAVVVP-----EGIDSAEIVKNAWKKYNLS 333 (401)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEEEeCC-----CCCCHHHHHHHHHHhCCEE
Confidence 2334455556788888888889999999999875 544321111112122335543 2578888988886 67998
Q ss_pred ccCCCCC-CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 934 GPTMSWP-VPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 934 ~~~~~~p-~~~~Lris~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
+..-..+ ....+||+....++.+|+.+++++|.+++.+.
T Consensus 334 i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~ 373 (401)
T PLN02409 334 LGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDV 373 (401)
T ss_pred EEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 7543334 25789999999999999999999999987664
No 92
>PRK14012 cysteine desulfurase; Provisional
Probab=99.84 E-value=2.3e-18 Score=202.27 Aligned_cols=311 Identities=13% Similarity=0.149 Sum_probs=196.5
Q ss_pred HHHHHHHHHHHHHhCCCce-eeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHH---HhCCcEEEEE
Q 001531 632 EMFNNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA---AMCGMKIVSV 707 (1058)
Q Consensus 632 ~~~~el~~~lael~G~~~~-~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a---~~~G~~vv~V 707 (1058)
+.+.++++.+++++|.+.. .+..++|+++...++.++..+.. +++++|+++...|.++...+ ...|++++.+
T Consensus 49 ~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~~~----~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v 124 (404)
T PRK14012 49 EAVDIARNQIADLIGADPREIVFTSGATESDNLAIKGAAHFYQ----KKGKHIITSKTEHKAVLDTCRQLEREGFEVTYL 124 (404)
T ss_pred HHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHhhc----CCCCEEEEecCccHHHHHHHHHHHhCCCEEEEE
Confidence 5677899999999999763 34555666655433333321111 24678999888776654433 3469999999
Q ss_pred cCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcE
Q 001531 708 GTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 786 (1058)
Q Consensus 708 ~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi 786 (1058)
+.+++|.+|+++|+++|+ +++++|+++++ |.+|.+. |+++|+++||++|+++++|+++..+... .....+++|+
T Consensus 125 ~~~~~g~~d~~~l~~~i~---~~t~lv~~~~~~n~tG~~~-~~~~I~~la~~~g~~vivD~a~~~g~~~-~~~~~~~~D~ 199 (404)
T PRK14012 125 DPQSNGIIDLEKLEAAMR---DDTILVSIMHVNNEIGVIQ-DIAAIGEICRERGIIFHVDAAQSVGKVP-IDLSKLKVDL 199 (404)
T ss_pred ccCCCCcCCHHHHHHhcC---CCCEEEEEECcCCCccchh-hHHHHHHHHHHcCCEEEEEcchhcCCcc-cCcccCCCCE
Confidence 999889999999999997 78999999987 4789998 7999999999999999999997532221 1234578999
Q ss_pred EEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001531 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1058)
Q Consensus 787 ~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1058)
+++++||.+ |.+|.|+++++++....+.....|... .++.+.++.++. ....+..+. ..+ ..
T Consensus 200 ~~~s~~K~~------gp~g~G~l~~~~~~~~~~~~~~~g~~~---~~~~~~gt~~~~-----~~~~l~~al---~~~-~~ 261 (404)
T PRK14012 200 MSFSAHKIY------GPKGIGALYVRRKPRVRLEAQMHGGGH---ERGMRSGTLPTH-----QIVGMGEAA---RIA-KE 261 (404)
T ss_pred EEEehhhcc------CCCceEEEEEecCCCCCCCceecCCCc---cCCccCCCcCHH-----HHHHHHHHH---HHH-Hh
Confidence 999999965 223678998887543332211112100 000111222211 111111122 221 23
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCeeeccC-CCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCC-------
Q 001531 867 GLTEASKIAILNANYMAKRLEKHYPILFRGV-NGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS------- 938 (1058)
Q Consensus 867 Gl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~-~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~------- 938 (1058)
++.+..++....++++.+.|+++..+...+. .....+.+.+.+. ..+..++.+.|.+.++..+...
T Consensus 262 ~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~~i~~g~~~~~~~~~~ 335 (404)
T PRK14012 262 EMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFN------YVEGESLIMALKDLAVSSGSACTSASLEP 335 (404)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEe------CcCHHHHHHhCCCeEEEchhhhCCCCCCC
Confidence 4555667777888899999987533322121 1111222333322 1234567777754333221110
Q ss_pred ------CC-----CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 001531 939 ------WP-----VPGTLMIEPTESESKEELDRYCDALISIREEIAQI 975 (1058)
Q Consensus 939 ------~p-----~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~~~ 975 (1058)
+| ..+.+|+++...+|++|+|+++++|++++++.+.+
T Consensus 336 ~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~~~ 383 (404)
T PRK14012 336 SYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKLREL 383 (404)
T ss_pred CHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 11 13789999999999999999999999998887653
No 93
>PRK14012 cysteine desulfurase; Provisional
Probab=99.83 E-value=2.4e-18 Score=202.12 Aligned_cols=290 Identities=15% Similarity=0.139 Sum_probs=204.1
Q ss_pred HHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhc-cccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc
Q 001531 210 LESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-IQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 288 (1058)
Q Consensus 210 l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~-~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~ 288 (1058)
-+.+.++++.+|+++|.+..++.+.+++|.+...++.++. ...++||+|+++..+|+++...++.+ +..|++++.++.
T Consensus 48 ~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~-~~~g~~~~~v~~ 126 (404)
T PRK14012 48 EEAVDIARNQIADLIGADPREIVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQL-EREGFEVTYLDP 126 (404)
T ss_pred HHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHH-HhCCCEEEEEcc
Confidence 3567889999999999988888888999988777665542 11137899999999999999888654 346888888754
Q ss_pred --------hhhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCC-CCCcccceEEEecCc
Q 001531 289 --------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQ 357 (1058)
Q Consensus 289 --------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~-~p~~~GaDivvgs~k 357 (1058)
+++++ +++++++|+++++ |.+|.+.|+++|.++||++|+++++|+ .+++|... +..++|+|+++++++
T Consensus 127 ~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~-a~~~g~~~~~~~~~~~D~~~~s~~ 205 (404)
T PRK14012 127 QSNGIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDA-AQSVGKVPIDLSKLKVDLMSFSAH 205 (404)
T ss_pred CCCCcCCHHHHHHhcCCCCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEc-chhcCCcccCcccCCCCEEEEehh
Confidence 34555 7888999999886 789999999999999999999999943 45666553 456789999999994
Q ss_pred ccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHH
Q 001531 358 RFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY 437 (1058)
Q Consensus 358 ~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~ 437 (1058)
++.+| ++.|+++++++...++.+.+.|.. . ..+.+.+|.|+. .+.++.+++-..
T Consensus 206 K~~gp-----~g~G~l~~~~~~~~~~~~~~~g~~------~-----------~~~~~~gt~~~~---~~~~l~~al~~~- 259 (404)
T PRK14012 206 KIYGP-----KGIGALYVRRKPRVRLEAQMHGGG------H-----------ERGMRSGTLPTH---QIVGMGEAARIA- 259 (404)
T ss_pred hccCC-----CceEEEEEecCCCCCCCceecCCC------c-----------cCCccCCCcCHH---HHHHHHHHHHHH-
Confidence 45333 257889998765444433333311 0 012345777763 445555555222
Q ss_pred hCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC---CCccE--EEEecCCHHHHHHHHHHcCceee----e-------
Q 001531 438 HGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL---PFFDT--VKVKCADAHAIASAAYKIEMNLR----V------- 501 (1058)
Q Consensus 438 ~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~---~~~~~--v~i~~~~~~~l~~~L~~~GI~~~----~------- 501 (1058)
..+++++.++...+++++.+.|+++.++++.+. ..... +.+...+..++.+.|.+.+|..+ .
T Consensus 260 --~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~g~~~~~~~~~~~~ 337 (404)
T PRK14012 260 --KEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSY 337 (404)
T ss_pred --HhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCcCHHHHHHhCCCeEEEchhhhCCCCCCCCH
Confidence 235777889999999999999998755776532 11122 33333334567666653333211 0
Q ss_pred ----------ccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 502 ----------VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 502 ----------~~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
...+.||+|++.++|++|+|+++++|..
T Consensus 338 ~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~ 375 (404)
T PRK14012 338 VLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRK 375 (404)
T ss_pred HHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 1137899999999999999999999964
No 94
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.83 E-value=1.5e-18 Score=199.69 Aligned_cols=313 Identities=12% Similarity=0.136 Sum_probs=201.4
Q ss_pred HHHHHHHHHHHHHHHhCCCce--e-eecCchHHHHHHHHHHHHHHHHHcCCCCCCEEE-EcCCCCCc-cHHHHHhCCcEE
Q 001531 630 YQEMFNNLGEWLCTITGFDSF--S-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGT-NPATAAMCGMKI 704 (1058)
Q Consensus 630 ~~~~~~el~~~lael~G~~~~--~-l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vl-ip~saHg~-~pa~a~~~G~~v 704 (1058)
+.+.+.++++++++++|.+.. . +...+|+.|..+.+.++. .++++++ +....++. ....++..|+++
T Consensus 29 ~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~--------~~~~~vi~~~~~~~~~~~~~~a~~~g~~~ 100 (355)
T TIGR03301 29 FNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLV--------PRDGKLLVLINGAYGERLAKICEYLGIPH 100 (355)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhcc--------CCCCeEEEECCCchhhHHHHHHHHcCCce
Confidence 346688999999999999752 2 345566665544333321 1234544 44444443 234467899999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCc-CCCCcc
Q 001531 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYI 782 (1058)
Q Consensus 705 v~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl-~~pg~~ 782 (1058)
+.++.++++.+|+++++++++++ ++++.|+++++ |.+|... |+++|+++|+++|+++++|+++. ++.. ....++
T Consensus 101 ~~i~~~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~~G~~~-~~~~i~~l~~~~~~~livD~~~s--~g~~~~~~~~~ 176 (355)
T TIGR03301 101 TDLNFSEYEPPDLNRIEEALAAD-PDITHVATVHHETTTGILN-PLEAIAKVARSHGAVLIVDAMSS--FGAIPIDIEEL 176 (355)
T ss_pred EEEecCCCCCCCHHHHHHHHHhC-CCceEEEEEecCCcccchh-HHHHHHHHHHHcCCEEEEEeccc--cCCcccchhhc
Confidence 99998877889999999999753 56777777776 4689998 79999999999999999998754 3322 123467
Q ss_pred CCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCC----CCCCCCCCCCCCCccchhhHHHHHHHHH
Q 001531 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI----PAPEKSQPLGTIAAAPWGSALILPISYT 858 (1058)
Q Consensus 783 GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~----g~~~~~~~t~~i~sa~~g~~~~~~~a~a 858 (1058)
++|+++.++||+|+ |+||+|++++++++.+.+.+.......+. ....+...+. ... +.....++..
T Consensus 177 ~~d~~~~s~~K~l~-----~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~t~----~~~~~~a~~~ 246 (355)
T TIGR03301 177 DVDALIASANKCLE-----GVPGFGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWR-FTP----PTHTVYAFAQ 246 (355)
T ss_pred CccEEEecCCcccc-----cCCceeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCC-CCC----cHHHHHHHHH
Confidence 89999999999984 56789999999876554432110000000 0000000011 111 1122223344
Q ss_pred HHHHHchhh-HHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccC
Q 001531 859 YIAMMGSKG-LTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 936 (1058)
Q Consensus 859 ~l~~lG~eG-l~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~ 936 (1058)
.+..+..+| +.+..++...+++++.+.|++. +++..+....... .+.+.++.. ...+..++.++|.++||.+..
T Consensus 247 al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~l~~~gi~i~~ 322 (355)
T TIGR03301 247 ALEELEAEGGVPARIARYRRNRELLVDGLRALGFQPLLPERWQSPI-IVSFLYPDD---PDFDFDDFYQELKERGFVIYP 322 (355)
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCc-EEEEECCCC---CcchHHHHHHHHHHCCEEEEC
Confidence 555565565 7777777888999999999875 4443221101011 133444310 113567899999999998754
Q ss_pred CCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001531 937 MSWPVPGTLMIEPTESESKEELDRYCDALISI 968 (1058)
Q Consensus 937 ~~~p~~~~Lris~te~~t~eeid~fi~aL~~i 968 (1058)
......+.+||++...++++|+++++++|+++
T Consensus 323 ~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 323 GKLTLADTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred CccccccEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 33122378999998889999999999999875
No 95
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.82 E-value=2e-18 Score=199.90 Aligned_cols=319 Identities=14% Similarity=0.119 Sum_probs=214.1
Q ss_pred cCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCc--ceEeecchHHHHHHHHHHh
Q 001531 171 IGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMS--NASLLDEGTAAAEAMAMCN 248 (1058)
Q Consensus 171 lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~a--nasl~~~~Taa~ea~~~a~ 248 (1058)
.+.| |..+++.+.+.+.. .| ..++ ++ ..+.+.+.++.+++|+|.+.. .+.+..+||.++++++.++
T Consensus 7 ~~pg--p~~~~~~v~~~~~~--~~-~~~~---~~----~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l 74 (363)
T TIGR02326 7 LTPG--PLTTSRTVKEAMLF--DW-CTWD---SD----YNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSA 74 (363)
T ss_pred ecCC--CCCCCHHHHHHhCC--CC-CCCC---hH----HHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhc
Confidence 3555 66777777644332 23 2222 22 345677888999999999754 5778899999999888776
Q ss_pred ccccCCCCE-EEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cC--CCEeEEEEEc-CCCceeeccH
Q 001531 249 NIQKGKKKT-FIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS--GDVCGVLVQY-PGTEGEVLDY 315 (1058)
Q Consensus 249 ~~~~~~gd~-Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~--------~~l~~-l~--~~t~~V~v~~-pn~~G~i~dl 315 (1058)
. . ++++ |+++...|+.... ..++..|++++.++. +++++ ++ ++++.|.+.+ .|.+|.+.|+
T Consensus 75 ~-~--~~~~vlv~~~~~~~~~~~---~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i 148 (363)
T TIGR02326 75 V-P--KDGKLLVVINGAYGARIV---QIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNPI 148 (363)
T ss_pred C-C--CCCeEEEEeCChhhHHHH---HHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcH
Confidence 3 2 4555 5567778876532 224557888887654 34554 43 3556676666 4789999999
Q ss_pred HHHHHHHHhcCcEEEEEeccccccCCC-CCCcccceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeec
Q 001531 316 GDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSID 393 (1058)
Q Consensus 316 ~~I~~~a~~~galliV~a~~~slg~l~-~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d 393 (1058)
++|+++||++|++++||+ .+++|... +..++|+|++++++ |+|++ +||+||++++++.++++.+...+
T Consensus 149 ~~I~~l~~~~g~~livD~-~~~~g~~~~~~~~~~~D~~~~s~~K~l~~-----p~G~G~l~~~~~~~~~~~~~~~~---- 218 (363)
T TIGR02326 149 EAVAKLAHRHGKVTIVDA-MSSFGGIPIDIAELHIDYLISSANKCIQG-----VPGFGFVIARQAELAACKGNARS---- 218 (363)
T ss_pred HHHHHHHHHcCCEEEEEc-cccccCcccchhhcCccEEEecCcccccc-----CCcceEEEECHHHHHHhhcCCCc----
Confidence 999999999999999953 55666543 34679999999999 66753 45789999999877665332211
Q ss_pred CCCCcceeeecccccccccc----cccCCCccchhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 001531 394 SSGKPALRVAMQTREQHIRR----DKATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVE 468 (1058)
Q Consensus 394 ~~g~~~~~l~lqtreq~irR----ekaTsni~t~~~l~a~~Aa~yl~~~g~~-Gl~~ia~~~~~~a~~l~~~L~~~G~~~ 468 (1058)
+.+++....+.... ..-|.|+ ....++.+++ .++..+ |++++.+++.++..++++.|+++| ++
T Consensus 219 ------~~~~~~~~~~~~~~~~~~~~ft~~~---~~~~al~~al--~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g-~~ 286 (363)
T TIGR02326 219 ------LSLDLYDQWRCMEDNHGKWRFTSPT---HVVHAFAQAL--LELEKEGGVAARHQRYQQNQKTLVAGMRALG-FE 286 (363)
T ss_pred ------eeecHHHHHHHHhccCCCCCCCCcH---HHHHHHHHHH--HHHHHhhCHHHHHHHHHHHHHHHHHHHHHcC-Ce
Confidence 22221100000000 0112332 4455555555 333333 689999999999999999999997 88
Q ss_pred EcCCC--CccE-EEEecCC-----HHHHHHHHHHcCceeeec---cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 469 VQGLP--FFDT-VKVKCAD-----AHAIASAAYKIEMNLRVV---DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 469 l~~~~--~~~~-v~i~~~~-----~~~l~~~L~~~GI~~~~~---~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
++.++ .... +.+..+. ..++.+.|.++||.++.. ..+.+|++++.+++.+|+++++++|+.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~ 358 (363)
T TIGR02326 287 PLLDDEIQSPIITSFYSPEDPDYRFADFYQRLKEQGFVIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGK 358 (363)
T ss_pred eccCcccCCceEEEEECCCCCCCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 76432 2222 2344332 478999999999998643 146899999889999999999999863
No 96
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.82 E-value=4.5e-18 Score=197.19 Aligned_cols=315 Identities=13% Similarity=0.130 Sum_probs=201.7
Q ss_pred HHHHHHHHHHHHHHhCCCc--e-eeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCC-CCCcc-HHHHHhCCcEEE
Q 001531 631 QEMFNNLGEWLCTITGFDS--F-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVS-AHGTN-PATAAMCGMKIV 705 (1058)
Q Consensus 631 ~~~~~el~~~lael~G~~~--~-~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~s-aHg~~-pa~a~~~G~~vv 705 (1058)
.+.+.++++.+++++|.+. . .+..++|++|..+++.++. .++++|+++.. .++.. ...++..|++++
T Consensus 36 ~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~--------~~~~~vlv~~~~~~~~~~~~~~~~~g~~~~ 107 (368)
T PRK13479 36 NALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLV--------PRDGKVLVPDNGAYGARIAQIAEYLGIAHV 107 (368)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhcc--------CCCCeEEEEeCCchHHHHHHHHHHcCCcEE
Confidence 3567899999999999864 2 3456677776644444331 13456666543 22222 144678999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcC-CCCccC
Q 001531 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGYIG 783 (1058)
Q Consensus 706 ~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~-~pg~~G 783 (1058)
.++.++++.+|+++++++++++ ++++.|++++|+ .+|... |+++|+++||++|+++++|+++. ++... ...+++
T Consensus 108 ~i~~~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~-~~~~i~~l~~~~~~~livDa~~~--~g~~~~~~~~~~ 183 (368)
T PRK13479 108 VLDTGEDEPPDAAEVEAALAAD-PRITHVALVHCETTTGILN-PLDEIAAVAKRHGKRLIVDAMSS--FGAIPIDIAELG 183 (368)
T ss_pred EEECCCCCCCCHHHHHHHHHhC-CCCcEEEEEcccCcccccc-CHHHHHHHHHHcCCEEEEEcccc--cCCccccccccC
Confidence 9999877889999999999742 467788899985 689988 79999999999999999998754 33221 224578
Q ss_pred CcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCC-CCC--CCCCCCCCCccchhhHHHHHHHHHHH
Q 001531 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIP-APE--KSQPLGTIAAAPWGSALILPISYTYI 860 (1058)
Q Consensus 784 aDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g-~~~--~~~~t~~i~sa~~g~~~~~~~a~a~l 860 (1058)
+|++++++||+|+ |.||+|++++++++.+.+.........|.. ... ..........+. .......+.+
T Consensus 184 ~d~~v~s~~K~l~-----g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~----~~~~~l~~al 254 (368)
T PRK13479 184 IDALISSANKCIE-----GVPGFGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPT----HVVAAFYQAL 254 (368)
T ss_pred ceEEEecCccccc-----cCCCceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcH----HHHHHHHHHH
Confidence 9999999999984 557899999998665554322111000100 000 000000011111 1112223334
Q ss_pred HHHchh-hHHHHHHHHHHHHHHHHHHHhcc-CCeeeccC-CCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCC
Q 001531 861 AMMGSK-GLTEASKIAILNANYMAKRLEKH-YPILFRGV-NGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 937 (1058)
Q Consensus 861 ~~lG~e-Gl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~-~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~ 937 (1058)
..+..+ ++.+..++...+++++.+.|++. +++..+.. ..+. .+.+.++. ..+.+..++.++|.++||.+...
T Consensus 255 ~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~l~~~L~~~gi~v~~g 329 (368)
T PRK13479 255 LELEEEGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQSPI--IVTFHAPA---DPAYDFKEFYERLKEQGFVIYPG 329 (368)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCce--EEEEECCC---CCCcCHHHHHHHHHHCCEEEecC
Confidence 444333 47777778888999999999875 44432110 0111 12232221 01246789999999999987532
Q ss_pred CCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 938 SWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 938 ~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
..+..+.+|++..-.++.+|+++++++|++++++
T Consensus 330 ~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~ 363 (368)
T PRK13479 330 KLTQVDTFRIGCIGDVDAADIRRLVAAIAEALYW 363 (368)
T ss_pred CCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 2112368999987778999999999999988764
No 97
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.82 E-value=2.8e-18 Score=200.43 Aligned_cols=366 Identities=16% Similarity=0.152 Sum_probs=228.7
Q ss_pred CCCccCCCCCHHHHHHHHHHHhcCccCcCcccccccccccCCccccccccccccccccc---------CCCCchhhhh--
Q 001531 560 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANI---------HPFAPADQAQ-- 628 (1058)
Q Consensus 560 ~~p~~~~~~sE~e~~r~~~~l~~~~~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~---------~P~~p~e~~q-- 628 (1058)
++| +.|+++..+...+.+|+..|..-...-++.| .-. .++.--.+.+..|.-| .-.|| ....
T Consensus 29 ~~p--~~g~~~~~i~~~l~~l~~~~~~~~~~~~~~g--ere--~rv~~~~~~~~~~~~~hgigr~~~l~~~q~-ka~gss 101 (444)
T TIGR03531 29 KIP--EEGWDDETIELFLHELSVMDTNNFPNNVGVG--ERE--GRVFSKLVARRHYRFCHGIGRSGDLVAPQP-KAAGSS 101 (444)
T ss_pred cCC--ccCCCHHHHHHHHHHHhcCCcCCCccccCcC--ccc--ceeechhhhhcccceecCCCCcccccccCc-cccCcc
Confidence 457 6899999999999999988754333223333 110 0000000111111112 22444 2221
Q ss_pred cHHHHHHHHHHHHHHHhCCCc--eeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEE
Q 001531 629 GYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVS 706 (1058)
Q Consensus 629 G~~~~~~el~~~lael~G~~~--~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~ 706 (1058)
....+..++++++++++|.+. ..+..++|+ |. +..+++.+.+. ++ .++++||+|...|.+..+++.+.|++++.
T Consensus 102 ~~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~T-g~-al~laL~alr~-~~-~~gd~VI~p~~th~S~~kAi~~~G~~pv~ 177 (444)
T TIGR03531 102 LLYKLTNKLVKDFLKLLGLRSIKSAFVVPLAT-GM-SLSLCLSALRH-KR-PKAKYVIWPRIDQKSCIKAISTAGFEPRV 177 (444)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEECCHH-HH-HHHHHHHHcCC-cC-CCCCEEEEECcChHHHHHHHHHcCCeEEE
Confidence 256788899999999999982 223344444 21 33333333211 11 13578999998888888889999999999
Q ss_pred EcC--C-CCCCCCHHHHHHHHHhcCCCeEEEEEEcCCCcc--cccccHHHHHHHHHHcCCEEEEeccCcccccC---cCC
Q 001531 707 VGT--D-AKGNINIEELRKAAEANRDNLSTLMVTYPSTHG--VYEEGIDEICKIIHDNGGQVYMDGANMNAQVG---LTS 778 (1058)
Q Consensus 707 V~~--d-~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~G--~i~~dI~eI~~lah~~g~lv~vD~a~~~al~g---l~~ 778 (1058)
|++ + +++.+|+++|+++|++..+++.++++++|++++ ..+ |+++|+++|++||+++|+|+|+.....- +..
T Consensus 178 Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~d-dL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~ 256 (444)
T TIGR03531 178 IETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPD-DIEEIAKICANYDIPHIVNNAYGLQSNKYMELIN 256 (444)
T ss_pred eeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchh-CHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhh
Confidence 995 3 347899999999998433266777888887654 566 8999999999999999999997521110 111
Q ss_pred C-CccC-CcEEEeCCccccccCCCCCCCceeEEEEe-CCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHH
Q 001531 779 P-GYIG-ADVCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 855 (1058)
Q Consensus 779 p-g~~G-aDi~~~s~hKtf~~P~g~GGPg~G~i~~~-~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~ 855 (1058)
+ .+.| +|++++++||+|.+|.+ .|.++++ +++.+.+... + .+.... .....
T Consensus 257 ~g~~~Grad~vv~s~hK~l~~pg~-----Gg~I~~~d~el~~~i~~~-------y--------~g~~~~------s~~~~ 310 (444)
T TIGR03531 257 KAIKVGRVDAVVSSTDKNFMVPVG-----GAIIYSFDENFIQEISKS-------Y--------PGRASA------SPSLD 310 (444)
T ss_pred ccccccCCCeEEEeCccCCCCCCC-----EEEEEECCHHHHHHHHHh-------c--------cCCCCC------hHHHH
Confidence 2 2344 79999999999987632 3566674 3444332100 0 000011 12345
Q ss_pred HHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---C-CeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCC
Q 001531 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---Y-PILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 931 (1058)
Q Consensus 856 a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~---~-~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~G 931 (1058)
+|+.+..+|.+|+++..++..++++++.++|+++ + +.+...+.+|.. +.+.+..+. +.+...+...|..++
T Consensus 311 ~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is--~~~~~~~~~---~~~~~~~g~~l~~~~ 385 (444)
T TIGR03531 311 VLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPIS--SAMTLSTLK---GKDPTMLGSMLYSRR 385 (444)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCcee--EEEeccccc---ccCHHHHHHHHHhCC
Confidence 6888899999999999999999999999999874 1 112222223332 334443331 456788888898888
Q ss_pred cccc-----CC-------C---CCC------CCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001531 932 FHGP-----TM-------S---WPV------PGTLMIEPTESESKEELDRYCDALISI 968 (1058)
Q Consensus 932 i~~~-----~~-------~---~p~------~~~Lris~te~~t~eeid~fi~aL~~i 968 (1058)
+..+ .- . |.- ...|.+......+++|||.|++.|.++
T Consensus 386 v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 386 VTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred CCCceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 7431 11 1 110 123444444567899999999999865
No 98
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.82 E-value=2.3e-18 Score=198.92 Aligned_cols=326 Identities=13% Similarity=0.034 Sum_probs=220.8
Q ss_pred CCCCCCCCChHHHHHHHHhCC-CcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCc-ceEee-cchHHHHHHHHHHh
Q 001531 172 GMGYYNTHVPPVILRNIMENP-AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMS-NASLL-DEGTAAAEAMAMCN 248 (1058)
Q Consensus 172 G~g~~~~~~p~~i~~~i~~~~-~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~a-nasl~-~~~Taa~ea~~~a~ 248 (1058)
+.| |..+|+.+.+++.... +.+ ......++. .+.+.+.++.+++|+|.+.. ++.++ .+||.++++++.++
T Consensus 8 ~pG--P~~~~~~v~~a~~~~~~~~~-~~~hr~~~f----~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l 80 (361)
T TIGR01366 8 GSG--PSKVRLEQLQALTTTAASLF-GTSHRQAPV----KNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGL 80 (361)
T ss_pred cCC--CcCCCHHHHHHHHhcCcccc-ccCcCChHH----HHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhc
Confidence 455 6678888775544221 000 011223333 36788889999999998543 56665 55999999998776
Q ss_pred ccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---hhhc-cCCCEeEEEEEc-CCCceeeccHHHHHHHHH
Q 001531 249 NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---DIDY-KSGDVCGVLVQY-PGTEGEVLDYGDFIKNAH 323 (1058)
Q Consensus 249 ~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~---~l~~-l~~~t~~V~v~~-pn~~G~i~dl~~I~~~a~ 323 (1058)
- .++.++++.+.|.+....+-.++...+ ++.+++.+ .++. ++++++.|++++ +|.+|.+.|+++| +|
T Consensus 81 ~----~~~~l~i~~G~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~lV~~~h~et~tG~~~pi~~I---~~ 152 (361)
T TIGR01366 81 I----EKKSLHLSFGEFSSKFAKAVKLAPWLG-EPIIVTADPGSAPEPQADPGVDVIAWAHNETSTGVAVPVRRP---EG 152 (361)
T ss_pred c----cccccEEecCHHHHHHHHHHHhhhccC-CceEEecCCCCCCCCccCCCCCEEEEcccCCccceecccccc---cc
Confidence 2 234556777888777666544332223 44554432 3333 567899998876 6899999999998 48
Q ss_pred hcCcEEEEEeccccccCCC-CCCcccceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCccee
Q 001531 324 ANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALR 401 (1058)
Q Consensus 324 ~~galliV~a~~~slg~l~-~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~ 401 (1058)
++|++++||+ ..++|... +.. .+|++++++ |.||.| ||++++++++++++++.+...|.. +.+ +.
T Consensus 153 ~~g~~~iVDa-vqs~g~~~idv~--~~D~~~~s~~K~lg~~-----~Gl~~~~~s~~~~~~~~~~~~~~~----~~p-~~ 219 (361)
T TIGR01366 153 SDDALVVIDA-TSGAGGLPVDIA--ETDVYYFAPQKNFASD-----GGLWLAIMSPAALERIEAIAASGR----WVP-EF 219 (361)
T ss_pred cCCCeEEEEc-CccccCCCCCHH--HCCEEEEEchhhcCCC-----CceEEEEECHHHHhhhhcccCCCC----CCc-hh
Confidence 9999999954 34666543 223 289999999 555433 368888999998877754433210 111 23
Q ss_pred eecccccccccccccCCCccchhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHHHHHHhcCCCeEEcC-CC--Cc--
Q 001531 402 VAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LP--FF-- 475 (1058)
Q Consensus 402 l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~-Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~-~~--~~-- 475 (1058)
+++..... .+.+.+|.|......++++.+++ .++..+ |++.+.+|+.+++++++++|.++++++++. .. ..
T Consensus 220 ~d~~~~~~-~~~~~~t~~tp~i~~i~~l~~al--~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~ 296 (361)
T TIGR01366 220 LSLPTAVD-NSLKNQTYNTPAIATLALLAEQI--DWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQV 296 (361)
T ss_pred hhHHHHHh-ccccCCCCCCchHHHHHHHHHHH--HHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccc
Confidence 44322211 23456888887778888888887 666666 699999999999999999999997556552 11 11
Q ss_pred -cEEEEecCC--HHHHHHHHHHcCceeee----ccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 476 -DTVKVKCAD--AHAIASAAYKIEMNLRV----VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 476 -~~v~i~~~~--~~~l~~~L~~~GI~~~~----~~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
.+|++. ++ ..++.+.|.++||.+.. +.++.+|+|++.+||.+|+++|+++|+.
T Consensus 297 v~~v~~~-~g~~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~ 356 (361)
T TIGR01366 297 VGTIDFV-DDIDAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDW 356 (361)
T ss_pred eEEEECC-CccCHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHH
Confidence 234442 33 78899999999998743 2246799999999999999999999964
No 99
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.82 E-value=5e-18 Score=195.74 Aligned_cols=262 Identities=11% Similarity=0.104 Sum_probs=192.5
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccc-cCCC-CEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 001531 207 QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ-KGKK-KTFIIASNCHPQTIDICITRADGFDIKVV 284 (1058)
Q Consensus 207 qG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~-~~~g-d~Vlv~~~~Hps~~~~~~~~a~~~gi~v~ 284 (1058)
....+.+.++++.+++++|++..++.+.+|+|.+++.++.++... ..++ ++|+++..+||++...++.. +..|++++
T Consensus 38 ~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~-~~~G~~v~ 116 (353)
T TIGR03235 38 HNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIRAL-ERNGFTVT 116 (353)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHHHH-HhcCCEEE
Confidence 334567888999999999998888888899998888777665311 1134 78999999999999998764 45699988
Q ss_pred EeCc--------hhhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCC-CCCcccceEEE
Q 001531 285 VSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVV 353 (1058)
Q Consensus 285 ~v~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~-~p~~~GaDivv 353 (1058)
.++. +++++ +++++++|+++++ |.+|.+.|+++|+++||++|++++|| ..+++|.+. +..++|+|+++
T Consensus 117 ~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD-~a~~~g~~~~~~~~~~~D~~~ 195 (353)
T TIGR03235 117 YLPVDESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVD-AAQVVGKITVDLSADRIDLIS 195 (353)
T ss_pred EEccCCCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEE-chhhcCCccccccccCCCEEE
Confidence 8764 34555 6778999999887 78999999999999999999999994 355676553 34578999999
Q ss_pred ecCcccccccCCCCCceEEEEEehhhhhc--CCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHH
Q 001531 354 GSAQRFGVPMGYGGPHAAFLATSQEYKRM--MPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMA 431 (1058)
Q Consensus 354 gs~k~lg~P~~~GGP~~G~l~~~~~~~~~--lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~A 431 (1058)
++++++.+| ||.|+++++++.... +.+.+.| +. +..+.+.+|.|+ ..++++.+
T Consensus 196 ~s~~K~~gp-----~g~g~l~~~~~~~~~~~~~~~~~~------~~-----------~~~~~~~gt~~~---~~~~al~~ 250 (353)
T TIGR03235 196 CSGHKIYGP-----KGIGALVIRKRGKPKAPLKPIMFG------GG-----------QERGLRPGTLPV---HLIVGMGE 250 (353)
T ss_pred eehhhcCCC-----CceEEEEEccCcccccccCceeeC------CC-----------CcCccccCCCCh---HHHHHHHH
Confidence 999445434 468999999875432 3332222 10 112345688888 45566666
Q ss_pred HHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCC---CccEEEEecCC--HHHHHHHHHHcCceee
Q 001531 432 AMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP---FFDTVKVKCAD--AHAIASAAYKIEMNLR 500 (1058)
Q Consensus 432 a~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~---~~~~v~i~~~~--~~~l~~~L~~~GI~~~ 500 (1058)
++- ++ .+|++++.+++.+++++++++|++.| ++++.++ ....++|..++ .+++.+.|.+ ||.++
T Consensus 251 al~--~~-~~~~~~~~~~~~~l~~~l~~~l~~~g-~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~L~~-~i~v~ 319 (353)
T TIGR03235 251 AAE--IA-RRNAQAWEVKLRAMRNQLRDALQTLG-VKLNGDPAETIPHILNFSIDGVNSEALIVNLRA-DAAVS 319 (353)
T ss_pred HHH--HH-HhhHHHHHHHHHHHHHHHHHHhccCC-eEEeCCcccccCCEEEEEeCCcCHHHHHHHHhC-CeEEE
Confidence 663 32 35889999999999999999999877 9987432 12245565555 7889999965 77765
No 100
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.82 E-value=6.6e-18 Score=198.18 Aligned_cols=344 Identities=15% Similarity=0.116 Sum_probs=221.9
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcC-CcccccccCCCCCCCC-ChHHHHHHHH----hCCCcccccCCChhHHhhHHHHH
Q 001531 139 MKFSKFDEGLTESQMIEHMQKLASM-NKVYKSFIGMGYYNTH-VPPVILRNIM----ENPAWYTQYTPYQAEIAQGRLES 212 (1058)
Q Consensus 139 ~~lp~~~~~~sE~e~~~~~~~la~~-n~~~~~~lG~g~~~~~-~p~~i~~~i~----~~~~~~t~ytpyq~e~sqG~l~~ 212 (1058)
..|| +++++..|+++++...-.. +.....|.|. ..+. .|.+.. .+. .+.. .|.. +....+.
T Consensus 15 ~~~p--~~~~~~~~~~~~~~~~iyld~~a~~~~~~~--~tt~~~p~~~~-~~~~~l~~~~~-----np~s---~~~~~~l 81 (431)
T TIGR01788 15 YRMP--EEEMPPDAAYQLIHDELSLDGNPRLNLATF--VTTWMEPEARK-LMDETINKNMI-----DKDE---YPQTAEI 81 (431)
T ss_pred ccCC--CCCCCHHHHHHHHHHHhhhcCCcceeeeee--eCCCCCHHHHH-HHHHHHhcCCC-----Cccc---CccHHHH
Confidence 3677 6899999999999865332 1111122222 1122 444432 222 1221 2222 1222377
Q ss_pred HHHHHHHHHHhcCCCC--cce--EeecchHHHHHHHHHHhccc--c-----C---CCCEEEEcCCCCHHHHHHHHHhhcC
Q 001531 213 LLNFQTMIADLTGLPM--SNA--SLLDEGTAAAEAMAMCNNIQ--K-----G---KKKTFIIASNCHPQTIDICITRADG 278 (1058)
Q Consensus 213 l~e~q~~ia~L~G~~~--ana--sl~~~~Taa~ea~~~a~~~~--~-----~---~gd~Vlv~~~~Hps~~~~~~~~a~~ 278 (1058)
+.+..+++|+++|++. ..+ .+++|||.++..++.+.+.. + + .+.+|+++..+|+++.+.++.
T Consensus 82 e~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~---- 157 (431)
T TIGR01788 82 ENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARY---- 157 (431)
T ss_pred HHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHH----
Confidence 8888999999999983 233 34688886555444333211 0 0 124799999999999988653
Q ss_pred CCeEEEEeCc---------hhhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhc------CcEEEEEecccc----
Q 001531 279 FDIKVVVSDL---------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN------GVKVVMATDLLA---- 337 (1058)
Q Consensus 279 ~gi~v~~v~~---------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~------galliV~a~~~s---- 337 (1058)
.|++++.+++ ++|++ ++++|.+|+++.. |.+|.++|+++|+++|+++ |++++||+ ..+
T Consensus 158 lg~~v~~i~~d~~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDa-aq~g~~~ 236 (431)
T TIGR01788 158 FDVELREVPMDPGRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDA-ASGGFIA 236 (431)
T ss_pred cCceeEEEecCCCceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEec-ccHHHHH
Confidence 4677766554 33555 7788999999986 6899999999999999999 99999954 223
Q ss_pred ---ccCCC-CCCcccceEEEecCcccc-cccCCCCCceEEEEEehh--hhhcCC--CcEEeeeecCCCCcceeeeccccc
Q 001531 338 ---LTILK-PPGELGADIVVGSAQRFG-VPMGYGGPHAAFLATSQE--YKRMMP--GRIVGVSIDSSGKPALRVAMQTRE 408 (1058)
Q Consensus 338 ---lg~l~-~p~~~GaDivvgs~k~lg-~P~~~GGP~~G~l~~~~~--~~~~lp--grivG~s~d~~g~~~~~l~lqtre 408 (1058)
.+-+. +....|+|.+..++++|+ +| ++.|+++++++ +.+.+. ...+|. +...+.+..
T Consensus 237 p~~~~~~~~~~~~~~~DSis~s~HK~~~~P-----~g~G~l~~r~~~~l~~~~~~~~~yl~~-----~~~~~t~~~---- 302 (431)
T TIGR01788 237 PFVYPDLEWDFRLPRVKSINVSGHKYGLVY-----PGVGWVIWRDEEALPEELIFHVNYLGG-----DEPTFTLNF---- 302 (431)
T ss_pred HHhCCCchhhcCCCCceEEEECchhccCCC-----CCcEEEEEeChHHcchhheecccccCC-----CCCCcceec----
Confidence 11111 113458999999997664 45 35789999875 222220 111120 000011111
Q ss_pred ccccccccCCCccchhHHHHHHHHHH--HHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC-CCccEEEEecC--
Q 001531 409 QHIRRDKATSNICTAQALLANMAAMY--AVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCA-- 483 (1058)
Q Consensus 409 q~irRekaTsni~t~~~l~a~~Aa~y--l~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~-~~~~~v~i~~~-- 483 (1058)
.|+ +.-++ ++| +..+|.+|++++.+++.+++++|.++|++.++|+++.+ +.+..|+|+.+
T Consensus 303 --sR~-----------g~~al--~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~ 367 (431)
T TIGR01788 303 --SRP-----------ANQVI--AQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDD 367 (431)
T ss_pred --Cch-----------HHHHH--HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCC
Confidence 111 11111 133 57889999999999999999999999999977999865 56777777654
Q ss_pred ---C--HHHHHHHHHHcCceeeec-c------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 484 ---D--AHAIASAAYKIEMNLRVV-D------SNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 484 ---~--~~~l~~~L~~~GI~~~~~-~------~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
+ ..++.++|.++||.+... . .-.+|+++....+++.+++|++.|+.
T Consensus 368 ~~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~ 425 (431)
T TIGR01788 368 ADPGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEA 425 (431)
T ss_pred CCCCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHH
Confidence 2 578999999999975321 1 13589999999999999999999864
No 101
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.82 E-value=1.8e-18 Score=200.87 Aligned_cols=316 Identities=16% Similarity=0.150 Sum_probs=208.8
Q ss_pred cccccccCCCCCCCCChHHHHHHHHhCCCccc--ccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHH
Q 001531 165 KVYKSFIGMGYYNTHVPPVILRNIMENPAWYT--QYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAE 242 (1058)
Q Consensus 165 ~~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t--~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~e 242 (1058)
...++|||....|...|+++. .+......+. ..+...+++.+|..+.+.++++.+|+++|.+. +.++++|+.++.
T Consensus 9 ~~s~~YL~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~--~l~~~sG~~a~~ 85 (370)
T PRK05937 9 FVTNDFLGFSRSDTLVHEVEK-RYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE--AFIVPSGYMANL 85 (370)
T ss_pred eECCCccCCCCCHHHHHHHHH-HHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe--EEEECChHHHHH
Confidence 346789999988877887774 4443211111 13445667889999999999999999999975 567788886665
Q ss_pred HHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhhc-cC------CCEeEEEEEcC-CCceeecc
Q 001531 243 AMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-KS------GDVCGVLVQYP-GTEGEVLD 314 (1058)
Q Consensus 243 a~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~~l~~-l~------~~t~~V~v~~p-n~~G~i~d 314 (1058)
++...+ . ++++.|+++..+|+++...++.. ....+.+.++|+++|++ ++ +++.+|++.++ |++|.+.|
T Consensus 86 ~~~~~~--~-~~~d~ii~d~~~H~sv~~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~p 161 (370)
T PRK05937 86 GLCAHL--S-SVTDYVLWDEQVHISVVYSLSVI-SGWHQSFRHNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAP 161 (370)
T ss_pred HHHHHh--C-CCCCEEEEEhhhhHHHHHHHHHc-CCceEEecCCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccC
Confidence 544433 1 36789999999999999998753 22334455567777776 53 34666777776 68999999
Q ss_pred HHHHHHHHHhcCcEEEEEeccccccCCCCCC-----cccc---eEEEecC-cccccccCCCCCceEEEEEehhhhhcCCC
Q 001531 315 YGDFIKNAHANGVKVVMATDLLALTILKPPG-----ELGA---DIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPG 385 (1058)
Q Consensus 315 l~~I~~~a~~~galliV~a~~~slg~l~~p~-----~~Ga---Divvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpg 385 (1058)
+++|.++||++|++++|| +.++.|.+...+ +||+ |+++.+. |.+| ++|+|+++.++ ....+..
T Consensus 162 l~eI~~l~~~~~~~livD-ea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g------~~G~~vl~~~~-~~~~~~~ 233 (370)
T PRK05937 162 LEQIIALSKKYHAHLIVD-EAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALG------SMGAALLSSSE-VKQDLML 233 (370)
T ss_pred HHHHHHHHHHcCCEEEEE-CCccccccCCCCCchHHhhCCCCCcEEEEechhhhh------cCceEEEcCHH-HHHHHHH
Confidence 999999999999999994 466777655433 3553 3556665 6554 23466766543 2221100
Q ss_pred cEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCC
Q 001531 386 RIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG 465 (1058)
Q Consensus 386 rivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G 465 (1058)
+..+.+++.+. |. ....++.+++ .++..+| +.+.+++.++.+++.+.|...+
T Consensus 234 ---------------------~~~~~~~s~~~-~~---~~~~a~~aal--~~l~~~~-~~~~~~l~~l~~~l~~~l~~~~ 285 (370)
T PRK05937 234 ---------------------NSPPLRYSTGL-PP---HLLISIQVAY--DFLSQEG-ELARKQLFRLKEYFAQKFSSAA 285 (370)
T ss_pred ---------------------hCCCCeecCCC-CH---HHHHHHHHHH--HHHHhCc-HHHHHHHHHHHHHHHHhcCCCC
Confidence 00011122221 11 2344444444 4444455 4567888899999998886542
Q ss_pred CeEEcCCCCccEEEEecCCHHHHHHHHHHcCceeeec---cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 466 TVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVV---DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 466 ~~~l~~~~~~~~v~i~~~~~~~l~~~L~~~GI~~~~~---~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
. .. ...+.+......++.+.|.++||.++.. ..+.+|+|++.+||++|+++++++|..
T Consensus 286 -~----~~-~~~i~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L~~ 346 (370)
T PRK05937 286 -P----GC-VQPIFLPGISEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVLAT 346 (370)
T ss_pred -C----CC-EEEEEeCChhHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 1 01 1123332112678899999999988643 136899999999999999999999963
No 102
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.82 E-value=1e-17 Score=194.34 Aligned_cols=320 Identities=14% Similarity=0.154 Sum_probs=213.5
Q ss_pred ccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCC--cceEeecchHHHHHHHHHH
Q 001531 170 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPM--SNASLLDEGTAAAEAMAMC 247 (1058)
Q Consensus 170 ~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~--anasl~~~~Taa~ea~~~a 247 (1058)
..+.| |..+++.+.+.+... | ..++ ++ ..+.+.++++.+++++|.+. ..+.+..+||.++++++.+
T Consensus 8 ~~~pg--P~~~~~~~~~a~~~~--~-~~~~---~~----~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~ 75 (368)
T PRK13479 8 LLTPG--PLTTSRTVREAMLRD--W-GSWD---DD----FNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGS 75 (368)
T ss_pred eecCC--CCCCCHHHHHHhCCC--C-CCCC---hH----HHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHh
Confidence 34666 555777776555442 4 2222 22 12467788899999999865 3466788999999998887
Q ss_pred hccccCCCCEEEEcCC-CCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cC--CCEeEEEEEcC-CCceeecc
Q 001531 248 NNIQKGKKKTFIIASN-CHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS--GDVCGVLVQYP-GTEGEVLD 314 (1058)
Q Consensus 248 ~~~~~~~gd~Vlv~~~-~Hps~~~~~~~~a~~~gi~v~~v~~--------~~l~~-l~--~~t~~V~v~~p-n~~G~i~d 314 (1058)
+. . ++++|++... .++... ...++..|++++.++. +++++ ++ ++++.|++.+| |.+|.+.|
T Consensus 76 l~-~--~~~~vlv~~~~~~~~~~---~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~ 149 (368)
T PRK13479 76 LV-P--RDGKVLVPDNGAYGARI---AQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNP 149 (368)
T ss_pred cc-C--CCCeEEEEeCCchHHHH---HHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC
Confidence 73 2 6777777654 444432 2335567888887765 23444 43 45677888888 68999999
Q ss_pred HHHHHHHHHhcCcEEEEEeccccccCCC-CCCcccceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeee
Q 001531 315 YGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSI 392 (1058)
Q Consensus 315 l~~I~~~a~~~galliV~a~~~slg~l~-~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~ 392 (1058)
+++|+++||++|++++|| ..+++|... +..++|+|++++++ |+|+ |+||+||+++++++++.+....
T Consensus 150 ~~~i~~l~~~~~~~livD-a~~~~g~~~~~~~~~~~d~~v~s~~K~l~-----g~~G~G~l~~~~~~~~~~~~~~----- 218 (368)
T PRK13479 150 LDEIAAVAKRHGKRLIVD-AMSSFGAIPIDIAELGIDALISSANKCIE-----GVPGFGFVIARRSELEACKGNS----- 218 (368)
T ss_pred HHHHHHHHHHcCCEEEEE-cccccCCccccccccCceEEEecCccccc-----cCCCceEEEECHHHHHHhhcCC-----
Confidence 999999999999999996 455666432 34678999999998 7675 3466899999998887764321
Q ss_pred cCCCCcceeeecccccccccccc---cCCCccchhHHHHHHHHHHHHHhCc-ccHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 001531 393 DSSGKPALRVAMQTREQHIRRDK---ATSNICTAQALLANMAAMYAVYHGP-EGLKTIAQRVHGLAGTFALGLKKLGTVE 468 (1058)
Q Consensus 393 d~~g~~~~~l~lqtreq~irRek---aTsni~t~~~l~a~~Aa~yl~~~g~-~Gl~~ia~~~~~~a~~l~~~L~~~G~~~ 468 (1058)
..+.+++........+.. -|.|+ ..++++.+++ .++.. .|++++.+++.++.+++++.|+++| ++
T Consensus 219 -----~~~~~~~~~~~~~~~~~~~~~~t~~~---~~~~~l~~al--~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~ 287 (368)
T PRK13479 219 -----RSLSLDLYDQWAYMEKTGQWRFTPPT---HVVAAFYQAL--LELEEEGGVPARGARYANNQRTLVAGMRALG-FE 287 (368)
T ss_pred -----CCeeecHHHHHhhhcccCCCCCCCcH---HHHHHHHHHH--HHHHHhhCHHHHHHHHHHHHHHHHHHHHHcC-Cc
Confidence 112222111000000111 14443 4455555555 33333 3688889999999999999999997 88
Q ss_pred EcCCC--Ccc-EEEEecCC-----HHHHHHHHHHcCceeeecc---CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 469 VQGLP--FFD-TVKVKCAD-----AHAIASAAYKIEMNLRVVD---SNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 469 l~~~~--~~~-~v~i~~~~-----~~~l~~~L~~~GI~~~~~~---~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
++.++ ..+ .+.+..+. ..++.+.|.++||.++... .+.+|++..-+++++|+++++++|..
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~ 359 (368)
T PRK13479 288 PLLDAEIQSPIIVTFHAPADPAYDFKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAE 359 (368)
T ss_pred ccCCchhcCceEEEEECCCCCCcCHHHHHHHHHHCCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 76322 111 23344321 5789999999999986531 35899998889999999999999963
No 103
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.81 E-value=9.7e-18 Score=194.73 Aligned_cols=284 Identities=17% Similarity=0.167 Sum_probs=193.4
Q ss_pred HhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 001531 205 IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1058)
Q Consensus 205 ~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~ 284 (1058)
..+|....+.++++.+|+++|++. +.++++++.++.+++.++. +++|+|+++...|.+.+..+ +..|++++
T Consensus 45 ~~~~~~~~~~~~~e~lA~~~g~~~--~~i~~g~~~a~~~~~~~l~---~~gd~Vl~~~~~h~s~~~~~----~~~g~~~~ 115 (370)
T TIGR02539 45 LDQITKPPIHDFLEDLAEFLGMDE--ARVTHGAREGKFAVMHALC---KEGDWVVLDGLAHYTSYVAA----ERAGLNVK 115 (370)
T ss_pred cccccchHHHHHHHHHHHHhCCCc--eEEECChHHHHHHHHHHhh---CCCCEEEECCcccHHHHHHH----HHcCCEEE
Confidence 456666678888899999999987 5668999999988888773 37999999999999888654 34577777
Q ss_pred EeCc----------hhhhc-cC-------CCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCC-CC
Q 001531 285 VSDL----------KDIDY-KS-------GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PP 344 (1058)
Q Consensus 285 ~v~~----------~~l~~-l~-------~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~-~p 344 (1058)
.++. +++++ +. +++++|++++| |++|.+.|+++|+++||++|++++|| +.++.|.+. +.
T Consensus 116 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livD-ea~~~g~~~~~~ 194 (370)
T TIGR02539 116 EVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLN-CAYTVGRMPVSA 194 (370)
T ss_pred EEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEE-CccccCCcCCCH
Confidence 6643 45555 53 36788999998 58999999999999999999999994 466777544 33
Q ss_pred CcccceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccch
Q 001531 345 GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTA 423 (1058)
Q Consensus 345 ~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~ 423 (1058)
..+++|++++|+ |+|+. ||| +||+++++++++++.... +.|.+.. ..-..+|++.
T Consensus 195 ~~~~~di~v~s~sK~~~~----~g~-~G~l~~~~~~i~~l~~~~----------~~~~~~~------~~~~~~~~~~--- 250 (370)
T TIGR02539 195 KEIGADFIVGSGHKSMAA----SGP-CGVLGMSEEWEDIVLRKS----------RYSPVKE------VELLGCTSRG--- 250 (370)
T ss_pred HHcCCCEEEeeCcccccC----CCC-EEEEEECHHHHhhhcccc----------cCCccce------eeeecccccc---
Confidence 468899999998 87752 333 899999999888763211 0011100 0000122221
Q ss_pred hHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcC--CCCccEEEEecCC-----------HHHHHH
Q 001531 424 QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG--LPFFDTVKVKCAD-----------AHAIAS 490 (1058)
Q Consensus 424 ~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~--~~~~~~v~i~~~~-----------~~~l~~ 490 (1058)
.+..+.++++ ... .+-+++ ..+..+++++|+++|+++| ++++. +...+.+.++++. +..+.+
T Consensus 251 ~~~~~~~~al--~~~-~~~l~~-~~~~~~~~~~l~~~L~~~g-~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~ 325 (370)
T TIGR02539 251 APIVTMMASF--PHV-VERVKR-WDEEVKKTRWFVAELEDIG-FIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYE 325 (370)
T ss_pred cHHHHHHHHH--HHH-HHHHHH-HHHHHHHHHHHHHHHHhCC-cEEEccCCCcCceEEEECCchhHHhhhhccccHHHHH
Confidence 1222333333 111 122222 2334556789999999998 98752 2222233344332 346899
Q ss_pred HHHHcCce-eeeccCCeEEEEeccCCCHHHHHHHHHHHh
Q 001531 491 AAYKIEMN-LRVVDSNTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 491 ~L~~~GI~-~~~~~~~~lris~~~~~t~edid~ll~al~ 528 (1058)
.|.++||. ++.-.++.+|+++. .+|++|+++++++|.
T Consensus 326 ~L~e~GI~~ir~~~~~~iRis~~-~~t~e~i~~l~~~L~ 363 (370)
T TIGR02539 326 ELKKRGIHGIRSGQTKYFKLSVY-GLTKEQVEYVVDSFE 363 (370)
T ss_pred HHHhCCCccccCCcceEEEEEec-CCCHHHHHHHHHHHH
Confidence 99999997 55322468999985 679999999999996
No 104
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.81 E-value=2.3e-18 Score=201.16 Aligned_cols=310 Identities=14% Similarity=0.136 Sum_probs=207.4
Q ss_pred CcccccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHH
Q 001531 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (1058)
Q Consensus 164 n~~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea 243 (1058)
|...++|||+..+|+...+++. .+.. |.+.++ .++..-|+...+.++|+.+|+++|.+. +.++.+|++++.+
T Consensus 2 ~f~s~dyLgl~~~~~~~~~~~~-a~~~---~g~~~~--~sr~~yg~~~~~~~LE~~lA~~~g~e~--al~~~sG~~a~~~ 73 (392)
T PLN03227 2 NFATHDFLSTSSSPTLRQTALE-SLSH---YGCGSC--GPRGFYGTIDAHLELEQCMAEFLGTES--AILYSDGASTTSS 73 (392)
T ss_pred CCcCcCccCCCCCHHHHHHHHH-HHHH---hCCCCc--ccccccCChHHHHHHHHHHHHHhCCCc--EEEecCcHHHHHH
Confidence 4456789999998887777764 5543 445443 344456777789999999999999875 7788899888887
Q ss_pred HHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe---Cchhhhc----cC-----------CCEeEEEEEc
Q 001531 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS---DLKDIDY----KS-----------GDVCGVLVQY 305 (1058)
Q Consensus 244 ~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v---~~~~l~~----l~-----------~~t~~V~v~~ 305 (1058)
+++++ . ++||+||+++..|++++..++. . +.+++++ +.++++. +. ++++.|++..
T Consensus 74 ~i~~l-~--~~GD~Vl~~~~~h~s~~~~~~l-~---~~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~ 146 (392)
T PLN03227 74 TVAAF-A--KRGDLLVVDRGVNEALLVGVSL-S---RANVRWFRHNDMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEG 146 (392)
T ss_pred HHHHh-C--CCCCEEEEeccccHHHHHHHHH-c---CCeEEEeCCCCHHHHHHHHHHhhhhccccccccCCCcEEEEEcC
Confidence 77776 2 3899999999999999988732 2 3454443 3444432 21 2577777776
Q ss_pred C-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCC-----------CcccceEEEecC-cccccccCCCCCceEE
Q 001531 306 P-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP-----------GELGADIVVGSA-QRFGVPMGYGGPHAAF 372 (1058)
Q Consensus 306 p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p-----------~~~GaDivvgs~-k~lg~P~~~GGP~~G~ 372 (1058)
+ |+.|.+.|+++|.++||++|+++++ ++.+++|.+... ...|+||++++. |.+| |.+|+
T Consensus 147 v~~~~G~i~~l~~i~~l~~~~g~~liv-De~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g-------~~gg~ 218 (392)
T PLN03227 147 LYKNTGTLAPLKELVALKEEFHYRLIL-DESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG-------SVGGM 218 (392)
T ss_pred CcCCCCcccCHHHHHHHHHHcCCEEEE-ECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhh-------ccCcE
Confidence 6 7899999999999999999999999 466776655431 134779999996 6553 34477
Q ss_pred EEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchh--HHHHHHHHHH-HHHhCcccHHHHHHH
Q 001531 373 LATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQ--ALLANMAAMY-AVYHGPEGLKTIAQR 449 (1058)
Q Consensus 373 l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~--~l~a~~Aa~y-l~~~g~~Gl~~ia~~ 449 (1058)
+.+++++.+.+.. .+..+++++. +. ...|++. +..+ .+ .+++.++
T Consensus 219 v~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~p~-~~~aa~~al~~~-~~-~~~~~~~ 266 (392)
T PLN03227 219 TVGSEEVVDHQRL-----------------------------SGSGYCFSASAPPF-LAKADATATAGE-LA-GPQLLNR 266 (392)
T ss_pred EecCHHHHHHHHH-----------------------------hCcCccccCCCCHH-HHHHHHHHHHHH-hc-CHHHHHH
Confidence 7778776543310 0111111111 21 1112221 1111 11 2456778
Q ss_pred HHHHHHHHHHHHhcCCCeEEc----------CCCCccEEEEecCC------------HHHHHHHHHHcCceeee------
Q 001531 450 VHGLAGTFALGLKKLGTVEVQ----------GLPFFDTVKVKCAD------------AHAIASAAYKIEMNLRV------ 501 (1058)
Q Consensus 450 ~~~~a~~l~~~L~~~G~~~l~----------~~~~~~~v~i~~~~------------~~~l~~~L~~~GI~~~~------ 501 (1058)
.++++++|+++|++.+ +..+ .......+.|.+.+ ..++.+.|.++||.+..
T Consensus 267 l~~~~~~l~~~L~~~~-~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~ 345 (392)
T PLN03227 267 LHDSIANLYSTLTNSS-HPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVK 345 (392)
T ss_pred HHHHHHHHHHHHHhcC-CccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccC
Confidence 8999999999998643 3311 11111223343322 14888999999997742
Q ss_pred -----ccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 502 -----VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 502 -----~~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
.++..+|++++..+|+|||++++++|..
T Consensus 346 ~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~ 378 (392)
T PLN03227 346 KFLQLVPPPCLRVVANASHTREDIDKLLTVLGE 378 (392)
T ss_pred CcCCCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 2357899999999999999999999964
No 105
>PLN03032 serine decarboxylase; Provisional
Probab=99.81 E-value=7.3e-18 Score=193.97 Aligned_cols=283 Identities=12% Similarity=0.025 Sum_probs=193.0
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCcce--EeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 001531 207 QGRLESLLNFQTMIADLTGLPMSNA--SLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1058)
Q Consensus 207 qG~l~~l~e~q~~ia~L~G~~~ana--sl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~ 284 (1058)
..+.+...+..+++|+|+|+++..+ .++.|||.++...+++.|.. .++.+|+++..+|+|+.+.++.+ |++++
T Consensus 62 ~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~-~~~~~vi~s~~~H~Sv~kaa~~l----g~~~~ 136 (374)
T PLN03032 62 VHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREV-FPDGILYASRESHYSVFKAARMY----RMEAV 136 (374)
T ss_pred ccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHh-CCCcEEEeCCCceeHHHHHHHHc----CCCCe
Confidence 3456778888899999999987654 78888886655433332211 14568999999999999987653 44444
Q ss_pred EeC--------chhhhc-cCC---CEeEEEEEcC-CCceeeccHHHHHHHHHhcC-----cEEEEEeccccccCCC----
Q 001531 285 VSD--------LKDIDY-KSG---DVCGVLVQYP-GTEGEVLDYGDFIKNAHANG-----VKVVMATDLLALTILK---- 342 (1058)
Q Consensus 285 ~v~--------~~~l~~-l~~---~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~g-----alliV~a~~~slg~l~---- 342 (1058)
.++ +++|++ +++ ++.+|+++.. |.+|.|+|+++|+++|+++| ++++||+ .++.+.+.
T Consensus 137 ~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDa-A~gg~~~p~~~~ 215 (374)
T PLN03032 137 KVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDG-ALFGLMMPFVSR 215 (374)
T ss_pred EeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEc-cchhhhhhccCC
Confidence 443 346666 644 4678888876 67999999999999999997 4899954 22222221
Q ss_pred C---CCcccceEEEecCccccc-ccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCC
Q 001531 343 P---PGELGADIVVGSAQRFGV-PMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATS 418 (1058)
Q Consensus 343 ~---p~~~GaDivvgs~k~lg~-P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTs 418 (1058)
. ....++|.+..++++|++ |++ .|++++|+++.+.+... ..|.-.. . .+
T Consensus 216 ~~~~~~~~~vDSis~s~HK~~g~P~g-----~G~ll~r~~~~~~~~~~-----------~~Yl~~~---d--------~t 268 (374)
T PLN03032 216 APEVTFRKPIGSVSVSGHKFLGCPMP-----CGVALTRKKHVKALSQN-----------VEYLNSR---D--------AT 268 (374)
T ss_pred CcccCCCcCCcEEEECcccccCCCcC-----eEEEEEEchhhHhhccC-----------CcccCCC---C--------Cc
Confidence 0 123589999999965544 753 57899998776655211 0010000 0 00
Q ss_pred CccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCCHHHHHHHHHHcCce
Q 001531 419 NICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMN 498 (1058)
Q Consensus 419 ni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~~~~l~~~L~~~GI~ 498 (1058)
-.||-.+..++..-+.+.++|.+|++++.+++.++|+||.+.|++.| ++++..|...+|+|..+.... + .+|+.
T Consensus 269 i~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~-~~~~~~p~~~~V~f~~~~~~~----~-~~~w~ 342 (374)
T PLN03032 269 IMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAG-LTCRLNELSSTVVFERPMDEA----F-IKKWQ 342 (374)
T ss_pred ccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEECCCceEEEEcCCCcHh----H-hheee
Confidence 11111122122222236899999999999999999999999999987 887755666677777653222 2 25888
Q ss_pred eeeccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 499 LRVVDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 499 ~~~~~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
+... .+.++++++..++++.+|+|++.|..
T Consensus 343 l~~~-~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 343 LACE-GDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred eccc-CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 8753 46899999999999999999999864
No 106
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.81 E-value=1.4e-18 Score=204.09 Aligned_cols=314 Identities=14% Similarity=0.144 Sum_probs=206.7
Q ss_pred CcccccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHH
Q 001531 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (1058)
Q Consensus 164 n~~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea 243 (1058)
|...++|+|.+.+|.++.+.+. .+. +.+ +..+ .+....|..+...++++.+|+++|.+. +.++.+|+.++++
T Consensus 49 ~~~sn~ylgl~~~p~v~~a~~~-~~~-~~~--~~~~--~s~~~~g~~~~~~~Le~~la~~~g~~~--~l~~~sG~~an~~ 120 (402)
T TIGR01821 49 VWCSNDYLGMGQHPEVLQAMHE-TLD-KYG--AGAG--GTRNISGTNIPHVELEAELADLHGKES--ALVFTSGYVANDA 120 (402)
T ss_pred EeEccCcCCCCCCHHHHHHHHH-HHH-HcC--CCCc--chhhhhCCcHHHHHHHHHHHHHhCCCe--EEEECchHHHHHH
Confidence 3456789999987776666654 443 222 2111 234455666778889999999999754 6788899988887
Q ss_pred HHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe---Cchhhhc-cC---C-CEeEEEEEcC-CCceeecc
Q 001531 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS---DLKDIDY-KS---G-DVCGVLVQYP-GTEGEVLD 314 (1058)
Q Consensus 244 ~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v---~~~~l~~-l~---~-~t~~V~v~~p-n~~G~i~d 314 (1058)
++.++... .+++.|+.+...|+++...++. .|+++..+ |.+++++ ++ + ++++|++.+| |++|.+.|
T Consensus 121 ai~~l~~~-~~~~~v~~~~~~h~s~~~~~~~----~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~ 195 (402)
T TIGR01821 121 TLATLAKI-IPGCVIFSDELNHASMIEGIRH----SGAEKFIFRHNDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAP 195 (402)
T ss_pred HHHHhhCC-CCCCEEEEcchHhHHHHHHHHH----cCCeEEEECCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccC
Confidence 77654311 2577888888899999988753 35665444 3455655 32 3 5788888887 68999999
Q ss_pred HHHHHHHHHhcCcEEEEEeccccccCCCCCC-----c----ccceEEEecC-cccccccCCCCCceEEEEEehhhhhcCC
Q 001531 315 YGDFIKNAHANGVKVVMATDLLALTILKPPG-----E----LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMP 384 (1058)
Q Consensus 315 l~~I~~~a~~~galliV~a~~~slg~l~~p~-----~----~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp 384 (1058)
+++|.++|+++|++++|| +.+++|++.+.+ . ...||++++. |.||.+ | ||+++++++++.+.
T Consensus 196 l~~i~~l~~~~~~~livD-ea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~---G----G~i~~~~~~~~~l~ 267 (402)
T TIGR01821 196 IEEICDLADKYGALTYLD-EVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVV---G----GYIAASRKLIDAIR 267 (402)
T ss_pred HHHHHHHHHHcCCEEEEe-CcccccccCCCCCccchhccCCCCCeEEEEechhhhccC---C----ceeecCHHHHHHHH
Confidence 999999999999999994 566666543321 1 1368998887 988642 2 67878877766541
Q ss_pred CcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcC
Q 001531 385 GRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL 464 (1058)
Q Consensus 385 grivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~ 464 (1058)
.. .+.|.. ..+.| +....+..+++ .++..+ +++.++..++.+++++.|+++
T Consensus 268 ~~----------~~~~~~------------t~~~~---~~~~aaa~aaL--~~~~~~--~~~~~~~~~~~~~l~~~L~~~ 318 (402)
T TIGR01821 268 SY----------APGFIF------------TTSLP---PAIAAGATASI--RHLKES--QDLRRAHQENVKRLKNLLEAL 318 (402)
T ss_pred Hh----------CcCcee------------cCcCC---HHHHHHHHHHH--HHhhcC--HHHHHHHHHHHHHHHHHHHHc
Confidence 00 000100 00011 01122222333 333222 556667778999999999998
Q ss_pred CCeEEcCCCCccEEEEecCC---HHHHHHHHHH-cCceeeec-------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 465 GTVEVQGLPFFDTVKVKCAD---AHAIASAAYK-IEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 465 G~~~l~~~~~~~~v~i~~~~---~~~l~~~L~~-~GI~~~~~-------~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
| ++++.+. ...+.+.++. +.++.+.|.+ +||.++.. ..+++|++++.++|++|+++++++|..
T Consensus 319 g-~~~~~~~-~~i~~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~ 392 (402)
T TIGR01821 319 G-IPVIPNP-SHIVPVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLL 392 (402)
T ss_pred C-CCcCCCC-CCEEEEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 7 7765321 1123333332 6788899875 59988653 125799999999999999999999963
No 107
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.81 E-value=8.5e-18 Score=193.34 Aligned_cols=317 Identities=14% Similarity=0.127 Sum_probs=209.8
Q ss_pred CCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCc--ceEeecchHHHHHHHHHHhccccCC
Q 001531 177 NTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMS--NASLLDEGTAAAEAMAMCNNIQKGK 254 (1058)
Q Consensus 177 ~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~a--nasl~~~~Taa~ea~~~a~~~~~~~ 254 (1058)
|..+++.+.+++.. .|.. +.++ -.+.+.++++++++++|.+.. .+.+..+||.++++++.++. . +
T Consensus 7 p~~~~~~~~~~~~~--~~~~----~~~~----~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~-~--~ 73 (355)
T TIGR03301 7 PLSTSATVRDAMLV--DWCH----WDSE----FNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLV-P--R 73 (355)
T ss_pred CCCCCHHHHHHhhh--hccC----CCHH----HHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhcc-C--C
Confidence 55677777645443 2211 1112 235677888999999999864 45577899999888887763 2 4
Q ss_pred CCE-EEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cC--CCEeEEEEEcC-CCceeeccHHHHHHH
Q 001531 255 KKT-FIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS--GDVCGVLVQYP-GTEGEVLDYGDFIKN 321 (1058)
Q Consensus 255 gd~-Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~--------~~l~~-l~--~~t~~V~v~~p-n~~G~i~dl~~I~~~ 321 (1058)
+++ |+++...|++.... .++..|++++.++. +++++ +. ++++.|++.++ |.+|.+.|+++|+++
T Consensus 74 ~~~vi~~~~~~~~~~~~~---~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l 150 (355)
T TIGR03301 74 DGKLLVLINGAYGERLAK---ICEYLGIPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKV 150 (355)
T ss_pred CCeEEEECCCchhhHHHH---HHHHcCCceEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHH
Confidence 565 55666777763322 24456887777654 34555 43 45666766665 789999999999999
Q ss_pred HHhcCcEEEEEeccccccCCC-CCCcccceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcc
Q 001531 322 AHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPA 399 (1058)
Q Consensus 322 a~~~galliV~a~~~slg~l~-~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~ 399 (1058)
||++|++++||+ .+++|... +..++|+|++++++ |+|+ |+||+|++++++++++.+.++. +.
T Consensus 151 ~~~~~~~livD~-~~s~g~~~~~~~~~~~d~~~~s~~K~l~-----~~~G~g~~~~~~~~~~~~~~~~----------~~ 214 (355)
T TIGR03301 151 ARSHGAVLIVDA-MSSFGAIPIDIEELDVDALIASANKCLE-----GVPGFGFVIARRDLLEASAGNA----------RS 214 (355)
T ss_pred HHHcCCEEEEEe-ccccCCcccchhhcCccEEEecCCcccc-----cCCceeEEEECHHHHHHhhCCC----------CC
Confidence 999999999963 56666542 34678999999998 7664 4467899999999887764221 11
Q ss_pred eeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCccc-HHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCC-cc-
Q 001531 400 LRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEG-LKTIAQRVHGLAGTFALGLKKLGTVEVQGLPF-FD- 476 (1058)
Q Consensus 400 ~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~G-l~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~-~~- 476 (1058)
+.+++.+-.+...+...+.+..+...++++.+++ ..+..+| ++++.++..++.+++++.|+++| +++..++. ..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al--~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g-~~~~~~~~~~~~ 291 (355)
T TIGR03301 215 LYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQAL--EELEAEGGVPARIARYRRNRELLVDGLRALG-FQPLLPERWQSP 291 (355)
T ss_pred ceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHH--HHHHHcccHHHHHHHHHHHHHHHHHHHHHcC-CeeecCCCCCCC
Confidence 2222211001111111222222223444544554 4444555 88899999999999999999987 88653221 11
Q ss_pred -EEEEecCC-----HHHHHHHHHHcCceeeecc---CCeEEEEeccCCCHHHHHHHHHHHh
Q 001531 477 -TVKVKCAD-----AHAIASAAYKIEMNLRVVD---SNTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 477 -~v~i~~~~-----~~~l~~~L~~~GI~~~~~~---~~~lris~~~~~t~edid~ll~al~ 528 (1058)
.+.+..+. ..++.++|.++||.+.... .+.+|++++.+++++|+++++++|.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~ 352 (355)
T TIGR03301 292 IIVSFLYPDDPDFDFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIK 352 (355)
T ss_pred cEEEEECCCCCcchHHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHHHHH
Confidence 23444432 4689999999999886532 2689999999999999999999986
No 108
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.81 E-value=7.8e-18 Score=196.67 Aligned_cols=284 Identities=17% Similarity=0.125 Sum_probs=194.7
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 001531 207 QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 286 (1058)
Q Consensus 207 qG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v 286 (1058)
.+....+.++++.+|+++|++. +.+++|+|.++.+++.++ . ++|++|+++...|.+.+..++ ..|++++.+
T Consensus 59 ~~~~~~~~~l~~~lA~~~g~~~--~~~~~g~t~a~~~al~~l-~--~~gd~Vlv~~~~h~s~~~~~~----~~G~~~~~v 129 (387)
T PRK09331 59 QIKKPPIADFHEDLAEFLGMDE--ARVTHGAREGKFAVMHSL-C--KKGDYVVLDGLAHYTSYVAAE----RAGLNVREV 129 (387)
T ss_pred cccChHHHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHh-c--CCCCEEEECCCchHHHHHHHH----HcCCEEEEE
Confidence 3444568899999999999975 677899998888887776 2 379999999999999987653 358888877
Q ss_pred Cc----------hhhhc-cC-------CCEeEEEEEcCC-CceeeccHHHHHHHHHhcCcEEEEEeccccccCCC-CCCc
Q 001531 287 DL----------KDIDY-KS-------GDVCGVLVQYPG-TEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGE 346 (1058)
Q Consensus 287 ~~----------~~l~~-l~-------~~t~~V~v~~pn-~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~-~p~~ 346 (1058)
+. +++++ +. +++++|++++|+ .+|.+.|+++|+++||++|++++|+ ..+++|.++ +..+
T Consensus 130 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD-~a~~~g~~~~~~~~ 208 (387)
T PRK09331 130 PKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLN-GAYTVGRMPVDGKK 208 (387)
T ss_pred eCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEE-CCcccCCcCCCHHH
Confidence 54 33444 43 378999999985 5999999999999999999999994 466777653 3457
Q ss_pred ccceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhH
Q 001531 347 LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA 425 (1058)
Q Consensus 347 ~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~ 425 (1058)
+|+|++++++ |+|+. +|++||+++++++++.+... .+.|... . ......+++. .+
T Consensus 209 ~g~D~~~~s~~K~l~~-----~~~~G~l~~~~~~i~~~~~~----------~~~~~~~-----~-~~~~~~~~~~---~~ 264 (387)
T PRK09331 209 LGADFIVGSGHKSMAA-----SAPSGVLATTEEYADKVFRT----------SRKFGVK-----E-VELLGCTLRG---AP 264 (387)
T ss_pred cCCCEEEeeCcccccC-----CCCEEEEEECHHHHhhcccc----------cCCCccc-----c-eeeeceecCc---hH
Confidence 8999999998 77753 35689999999877765211 0111100 0 0001112211 23
Q ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcC-CCeEEcCC-CC-ccEEEEecCC-----------HHHHHHH
Q 001531 426 LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGL-PF-FDTVKVKCAD-----------AHAIASA 491 (1058)
Q Consensus 426 l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~-G~~~l~~~-~~-~~~v~i~~~~-----------~~~l~~~ 491 (1058)
.+++++++. .+- +-+ +..++.++++++++++|+++ | ++++.. +. .+.+.+..+. +.++.+.
T Consensus 265 ~~~~~aal~--~~~-~~~-~~~~~~~~~~~~l~~~L~~l~g-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (387)
T PRK09331 265 LVTLMASFP--HVV-ERV-KRWDEEVKKARWFVDELEKIEG-FKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEE 339 (387)
T ss_pred HHHHHHHHH--HHH-HHH-HHHHHHHHHHHHHHHHHhcCCC-EEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHH
Confidence 444455541 111 112 24456678999999999999 6 998732 11 1112233221 3569999
Q ss_pred HHHcCceeeeccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 492 AYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 492 L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
|.++||.......+.++...+..+|++|+++++++|+.
T Consensus 340 L~~~gI~~~~~~~~~i~ri~~~g~t~~di~~l~~aL~~ 377 (387)
T PRK09331 340 LKKRGIHGIKPGATKEFKLSTYGLTWEQVEYVADAFKE 377 (387)
T ss_pred HHHcCceEEccCCceEEEEEeccCCHHHHHHHHHHHHH
Confidence 99999974333345666666666899999999999963
No 109
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.80 E-value=6.6e-18 Score=198.19 Aligned_cols=292 Identities=21% Similarity=0.237 Sum_probs=192.4
Q ss_pred HHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHH-----HHhCCcEEEEEcCCC
Q 001531 637 LGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-----AAMCGMKIVSVGTDA 711 (1058)
Q Consensus 637 l~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~-----a~~~G~~vv~V~~d~ 711 (1058)
.++++++++|.+...+.+++|++|..+++.++. +++++|+++...|+.+... ++..|.+++.++++.
T Consensus 70 ~~~~~~~~~g~~~~~v~~~sgt~a~~~~l~~l~--------~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 141 (402)
T cd00378 70 AIERAKKLFGAEYANVQPHSGSQANLAVYFALL--------EPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGV 141 (402)
T ss_pred HHHHHHHHhCCCceeeecCCcHHHHHHHHHHhc--------CCCCEEEEecCccCccccccccccccccceeEEEecCCc
Confidence 567788999998766777777766644443331 2567899988888766443 566788777776643
Q ss_pred ---CCCCCHHHHHHHHHhcCCCeEEEEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCccccc--C-cCCCCccCCc
Q 001531 712 ---KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV--G-LTSPGYIGAD 785 (1058)
Q Consensus 712 ---~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~--g-l~~pg~~GaD 785 (1058)
++.+|++++++++.+ +++++|++++|++ |... |+++|+++||++|+++++|+++..++. + ...+.. ++|
T Consensus 142 ~~~~~~id~~~l~~~i~~--~~~~~v~~~~~~~-~~~~-~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~-~~d 216 (402)
T cd00378 142 DPETGLIDYDALEKMALE--FKPKLIVAGASAY-PRPI-DFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP-GAD 216 (402)
T ss_pred CcccCCcCHHHHHHHHHh--CCCCEEEecCccc-CCCc-CHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc-CCc
Confidence 588999999999963 4677888877754 6665 799999999999999999999744332 1 122223 789
Q ss_pred EEEeCCccccccCCCCCCCceeEEEEeC-CCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHc
Q 001531 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1058)
Q Consensus 786 i~~~s~hKtf~~P~g~GGPg~G~i~~~~-~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1058)
+++.++||+| +||++|++++++ ++...+.... .....++.... ..++.+ ..+..+-
T Consensus 217 v~~~s~sK~l------~G~~gg~i~~~~~~~~~~l~~~~--------------~~~~~~~~~~~--~~~a~~-~al~~~~ 273 (402)
T cd00378 217 VVTTTTHKTL------RGPRGGLILTRKGELAKKINSAV--------------FPGLQGGPHLH--VIAAKA-VALKEAL 273 (402)
T ss_pred EEEeccccCC------CCCCceEEEeccHHHHHHHHHHh--------------CccccCCchHH--HHHHHH-HHHHHHh
Confidence 9999999988 367778888876 6554431100 00011111111 111111 1222222
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCC--
Q 001531 865 SKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPV-- 941 (1058)
Q Consensus 865 ~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~-- 941 (1058)
..++.+..++..++++++.+.|++. +++.. .+.+ .+.+++++++ .+.+...+.+.|.++||.+....+|.
T Consensus 274 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~--~~~v~v~~~~----~~~~~~~~~~~l~~~gI~v~~~~~p~~~ 346 (402)
T cd00378 274 EPEFKAYAKQVVENAKALAEALKERGFKVVS-GGTD--NHLVLVDLRP----KGITGKAAEDALEEAGITVNKNTLPWDP 346 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCeEee-cCCC--CeEEEEeCCc----cCCCHHHHHHHHHHcCcEEcCCcCCCCC
Confidence 2245666677888999999999875 54432 2212 3446677652 13456778888888999886444442
Q ss_pred -----CCEEEEEcCCCC----CHHHHHHHHHHHHHHHHH
Q 001531 942 -----PGTLMIEPTESE----SKEELDRYCDALISIREE 971 (1058)
Q Consensus 942 -----~~~Lris~te~~----t~eeid~fi~aL~~i~~e 971 (1058)
++.+||+++..+ +.+||+++++.|++++.+
T Consensus 347 ~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~ 385 (402)
T cd00378 347 SSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKD 385 (402)
T ss_pred CCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence 257999998754 689999999999987654
No 110
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.80 E-value=1e-17 Score=193.80 Aligned_cols=301 Identities=16% Similarity=0.174 Sum_probs=188.3
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g 713 (1058)
..++++.+++++|++.+ +..++++++... +++.+. .++++|+++...|......+...|++++.++.+.++
T Consensus 46 ~~~l~~~la~~~g~~~i-~~~~g~t~al~~---~l~~~~-----~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 116 (361)
T cd06452 46 IKDFHHDLAEFLGMDEA-RVTPGAREGKFA---VMHSLC-----EKGDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHP 116 (361)
T ss_pred HHHHHHHHHHHcCCceE-EEeCCHHHHHHH---HHHHhc-----CCCCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCC
Confidence 55889999999999654 344455555433 333321 256789999887876666688899999999998765
Q ss_pred --CCCHHHHHHHHHhcC----CCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCc-CCCCccCCc
Q 001531 714 --NINIEELRKAAEANR----DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIGAD 785 (1058)
Q Consensus 714 --~iD~e~L~~~i~~~~----~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl-~~pg~~GaD 785 (1058)
.+|+++|+++++++. +++++|++++|+ .+|... |+++|+++|+++|+++++|+++.. +.+ ..+.++|+|
T Consensus 117 ~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~-~~~~i~~~~~~~~~~vivD~a~~~--g~~~~~~~~~~~d 193 (361)
T cd06452 117 EYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLH-DAKKIAKVCHEYGVPLLLNGAYTV--GRMPVSGKELGAD 193 (361)
T ss_pred CcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeec-cHHHHHHHHHHcCCeEEEECCccc--CCcCCCHHHcCCC
Confidence 899999999996421 378899999996 589988 799999999999999999999753 222 123357899
Q ss_pred EEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHch
Q 001531 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1058)
Q Consensus 786 i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1058)
+++.++||+|+ +++++|++++++++.+.+-... .. + .. .......++. .... +..+++.+..+ .
T Consensus 194 ~~~~s~~K~l~-----~~~~~G~l~~~~~~~~~l~~~~-~~---~---~~-~~~~~~~~~~-~~~~-~~~~~~al~~~-~ 257 (361)
T cd06452 194 FIVGSGHKSMA-----ASAPIGVLATTEEWADIVFRTS-QM---F---KI-KEVELLGCTL-RGAP-LVTLMASFPHV-K 257 (361)
T ss_pred EEEecCCcccc-----CCCCeEEEEECHHHHHHHhccc-cc---c---cc-ceeeeecccc-CchH-HHHHHHHHHHH-H
Confidence 99999999995 2347899999876655431100 00 0 00 0000000000 0001 11112222221 1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCccceEEEEeccccc---ccCCCCHHHHHHHHHHCCccccCCCCC
Q 001531 866 KGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLK---NTAGIEPEDVAKRLMDYGFHGPTMSWP 940 (1058)
Q Consensus 866 eGl~~~a~~~~~~a~yL~~~L~~~--~~v~~~g~~~~~~~e~vv~~~~~~---~~~g~~~~~v~k~L~~~Gi~~~~~~~p 940 (1058)
+.++ ..++..+++++++++|+++ +++.-..+ ...+-+.++...+. .....+..++.++|.++||.+. ++
T Consensus 258 ~~~~-~~~~~~~~~~~l~~~L~~l~g~~v~~~~~--~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~---~~ 331 (361)
T cd06452 258 ERVK-RWDEEVEKARWFVAELEKIEGIKQLGEKP--KNHDLMFFETPSFDEIAKKHKRRGYFLYSELKKRGIHGI---KP 331 (361)
T ss_pred HHHH-HHHHHHHHHHHHHHHHhcCCCeEEECCCC--CCCceEEEEcCCcchhhhhccccchhHHHHHHHcCceEE---cC
Confidence 2222 3344456778999999875 33321111 11122334433110 0001234579999999999842 22
Q ss_pred -CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001531 941 -VPGTLMIEPTESESKEELDRYCDALISIR 969 (1058)
Q Consensus 941 -~~~~Lris~te~~t~eeid~fi~aL~~i~ 969 (1058)
....+|++.. ..+++|+++++++|+++.
T Consensus 332 ~~~~~~ri~~~-g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 332 GLTRYFKLSTY-GLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred CCceEEEEEec-CCCHHHHHHHHHHHHHHh
Confidence 2356888773 368999999999998764
No 111
>PLN02483 serine palmitoyltransferase
Probab=99.80 E-value=1.2e-17 Score=200.18 Aligned_cols=317 Identities=17% Similarity=0.218 Sum_probs=207.8
Q ss_pred CcccccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHH
Q 001531 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (1058)
Q Consensus 164 n~~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea 243 (1058)
|-...||||.+..+...++.+.+.+.. |.++.. .++...|+...+.++++.+|+++|.+. +.++.+|++++.+
T Consensus 104 n~~s~~YLgl~~~~~~~~~~~~~ai~~---~g~~~~--~sr~~~g~~~~~~ele~~lA~~~g~~~--ai~~~~G~~an~~ 176 (489)
T PLN02483 104 NLGSYNYLGFAAADEYCTPRVIESLKK---YSASTC--SSRVDGGTTKLHRELEELVARFVGKPA--AIVFGMGYATNST 176 (489)
T ss_pred EeecCCccCcCCCCHHHHHHHHHHHHH---hCCCCC--ccccccCCcHHHHHHHHHHHHHhCCCc--EEEECCHHHHHHH
Confidence 445668999996433333333345543 233322 334556778889999999999999765 6778888877776
Q ss_pred HHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---hhhhc-c-------CCCE-----eEEEEEcC-
Q 001531 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KDIDY-K-------SGDV-----CGVLVQYP- 306 (1058)
Q Consensus 244 ~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~---~~l~~-l-------~~~t-----~~V~v~~p- 306 (1058)
++.++ . ++||+|++++..|++++..++ ..|++++.++. +++++ + .++| +.+++..+
T Consensus 177 ~i~al-~--~~Gd~Vi~d~~~h~s~~~~~~----~~Ga~v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v 249 (489)
T PLN02483 177 IIPAL-I--GKGGLIISDSLNHNSIVNGAR----GSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGI 249 (489)
T ss_pred HHHHh-C--CCCCEEEEcchhhHHHHHHHH----HcCCeEEEEeCCCHHHHHHHHHhhhhccccccccCCceEEEEECCC
Confidence 66555 2 389999999999999998764 35788877653 44443 2 1333 55555544
Q ss_pred -CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCC----------CcccceEEEecC-cccccccCCCCCceEEEE
Q 001531 307 -GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP----------GELGADIVVGSA-QRFGVPMGYGGPHAAFLA 374 (1058)
Q Consensus 307 -n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p----------~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~ 374 (1058)
|+.|.+.|+++|+++|+++|+++++| +.+++|.+... ...++||+++|. |.||.+ | ||++
T Consensus 250 ~s~~G~~~~l~~I~~la~~~~~~livD-Ea~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~---G----G~i~ 321 (489)
T PLN02483 250 YSMEGELCKLPEIVAVCKKYKAYVYLD-EAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSC---G----GYIA 321 (489)
T ss_pred CCCCCcccCHHHHHHHHHHcCCEEEEE-CcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccC---c----eEEE
Confidence 78999999999999999999999994 56666544321 123679999998 988642 2 7999
Q ss_pred EehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCccc---HHHHHHHHH
Q 001531 375 TSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEG---LKTIAQRVH 451 (1058)
Q Consensus 375 ~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~G---l~~ia~~~~ 451 (1058)
+++++++.+.... +++ .. ++ .+++....+..+++- ...+.+| ..+..++++
T Consensus 322 ~~~~li~~l~~~~----------~~~------------~~-~~--~~~p~~~~~~~aaL~-~l~~~~g~~~~~~~~~~l~ 375 (489)
T PLN02483 322 GSKELIQYLKRTC----------PAH------------LY-AT--SMSPPAVQQVISAIK-VILGEDGTNRGAQKLAQIR 375 (489)
T ss_pred cCHHHHHHHHHhC----------ccc------------cc-cC--CcCHHHHHHHHHHHH-HHHhCccccchHHHHHHHH
Confidence 8888777652100 000 00 00 011122222233331 1122222 244567889
Q ss_pred HHHHHHHHHHhcCCCeEEcCCCC--ccEEEEecCC-HHHHHHHHHHcCceeeec-------cCCeEEEEeccCCCHHHHH
Q 001531 452 GLAGTFALGLKKLGTVEVQGLPF--FDTVKVKCAD-AHAIASAAYKIEMNLRVV-------DSNTVTASFDETTTLEDVD 521 (1058)
Q Consensus 452 ~~a~~l~~~L~~~G~~~l~~~~~--~~~v~i~~~~-~~~l~~~L~~~GI~~~~~-------~~~~lris~~~~~t~edid 521 (1058)
++.+++++.|+++| +++..... .-.+.+..+. ..++.+.|.++||.+... ..+.+|++++..+|++||+
T Consensus 376 ~~~~~l~~~L~~~G-~~v~~~~~sp~~~l~l~~~~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId 454 (489)
T PLN02483 376 ENSNFFRSELQKMG-FEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQNVAVVVVGFPATPLLLARARICISASHSREDLI 454 (489)
T ss_pred HHHHHHHHHHHHCC-CcccCCCCCCEEEEEECCHHHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHH
Confidence 99999999999997 87763211 1122222222 568999999999987532 1268999999999999999
Q ss_pred HHHHHHhC
Q 001531 522 KLFIVFAG 529 (1058)
Q Consensus 522 ~ll~al~~ 529 (1058)
+++++|..
T Consensus 455 ~~l~~L~~ 462 (489)
T PLN02483 455 KALEVISE 462 (489)
T ss_pred HHHHHHHH
Confidence 99999963
No 112
>PRK07179 hypothetical protein; Provisional
Probab=99.80 E-value=4.7e-18 Score=199.90 Aligned_cols=310 Identities=15% Similarity=0.160 Sum_probs=205.4
Q ss_pred cccccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHH
Q 001531 165 KVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAM 244 (1058)
Q Consensus 165 ~~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~ 244 (1058)
...++|||...+|.++.+... .+...+ +.. ..+....+..+...++++.+|+++|.+. +.++++|+.+++++
T Consensus 59 ~~~~~YL~l~~~p~v~~a~~~-~~~~~~---~~~--~~s~~~~~~~~~~~~le~~la~~~g~~~--~~~~~sG~~An~~~ 130 (407)
T PRK07179 59 LQSNDYLNLSGHPDIIKAQIA-ALQEEG---DSL--VMSAVFLHDDSPKPQFEKKLAAFTGFES--CLLCQSGWAANVGL 130 (407)
T ss_pred eecCCccCCCCCHHHHHHHHH-HHHHhC---CCC--CccccccCCchHHHHHHHHHHHHhCCCc--EEEECCHHHHHHHH
Confidence 345679999977766655553 443321 111 0011111212355567789999999875 56789999888887
Q ss_pred HHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe---Cchhhhc-cCC-CEeEEEEEcC-CCceeeccHHHH
Q 001531 245 AMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS---DLKDIDY-KSG-DVCGVLVQYP-GTEGEVLDYGDF 318 (1058)
Q Consensus 245 ~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v---~~~~l~~-l~~-~t~~V~v~~p-n~~G~i~dl~~I 318 (1058)
+.++. ++++.|+++...|+++...++. .|++++.. +++++++ +++ ++++|++.++ |++|.+.|+++|
T Consensus 131 l~~l~---~~g~~v~~~~~~h~s~~~~~~~----~g~~~~~~~~~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I 203 (407)
T PRK07179 131 LQTIA---DPNTPVYIDFFAHMSLWEGVRA----AGAQAHPFRHNDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADI 203 (407)
T ss_pred HHHhC---CCCCEEEEECCcCHHHHHHHHH----CCCeEEEecCCCHHHHHHHHHhcCCeEEEECCCCCCCCccccHHHH
Confidence 77763 2689999999999999877643 36665544 5567776 654 4677777776 689999999999
Q ss_pred HHHHHhcCcEEEEEeccccccCCCCCC-----cc----cceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEE
Q 001531 319 IKNAHANGVKVVMATDLLALTILKPPG-----EL----GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIV 388 (1058)
Q Consensus 319 ~~~a~~~galliV~a~~~slg~l~~p~-----~~----GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgriv 388 (1058)
.++|+++|+++++| +.+++|.....+ .+ ++|++++|. |.++. ..|++++++++.+.++..
T Consensus 204 ~~l~~~~~~~livD-ea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g~-------~~G~l~~~~~~~~~~~~~-- 273 (407)
T PRK07179 204 VDIAEEFGCVLVVD-ESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAG-------RAGIITCPRELAEYVPFV-- 273 (407)
T ss_pred HHHHHHcCCEEEEE-CcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhhc-------cCeEEEeCHHHHHHHHHh--
Confidence 99999999999994 455665442211 23 469999997 87752 257899888776654200
Q ss_pred eeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 001531 389 GVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVE 468 (1058)
Q Consensus 389 G~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~ 468 (1058)
..+ + ...+|.+ .+.+.++.+++ .++. ..+++.+++.++.+++++.|+++| ++
T Consensus 274 -------~~~-~------------~~~~t~~---~~~~aa~~aal--~~~~--~~~~~~~~l~~~~~~l~~~L~~~g-~~ 325 (407)
T PRK07179 274 -------SYP-A------------IFSSTLL---PHEIAGLEATL--EVIE--SADDRRARLHANARFLREGLSELG-YN 325 (407)
T ss_pred -------CcC-e------------eeCCCCC---HHHHHHHHHHH--HHHh--cCHHHHHHHHHHHHHHHHHHHHcC-CC
Confidence 000 0 0112222 12333333333 3332 124577889999999999999997 87
Q ss_pred EcCCCCccEEEEecCC---HHHHHHHHHHcCceeeec-------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 469 VQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 469 l~~~~~~~~v~i~~~~---~~~l~~~L~~~GI~~~~~-------~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
+.+.. ..+.+..+. +..+.+.|.++||.++.. ..+.+|++++..+|++|+++++++|..
T Consensus 326 v~~~~--~i~~l~~~~~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~ 394 (407)
T PRK07179 326 IRSES--QIIALETGSERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCRE 394 (407)
T ss_pred CCCCC--CEEEEEeCCHHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 66432 223344332 577888999999974321 136899999999999999999999964
No 113
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.80 E-value=5.8e-18 Score=201.52 Aligned_cols=283 Identities=12% Similarity=0.085 Sum_probs=192.7
Q ss_pred HHHHHH-HHHHHHHhcCCCCcceEe---ecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhc------CC
Q 001531 210 LESLLN-FQTMIADLTGLPMSNASL---LDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRAD------GF 279 (1058)
Q Consensus 210 l~~l~e-~q~~ia~L~G~~~anasl---~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~------~~ 279 (1058)
.+.+.+ .++.+++++|.+.++... +.+||.++.+++.++ + ++||+|++++.+|++....++.+.+ ..
T Consensus 78 ~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al-~--~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~ 154 (452)
T PTZ00094 78 VDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTAL-L--QPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSI 154 (452)
T ss_pred HHHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHh-c--CCCCEEEecccccCCccccccccccccccccee
Confidence 355553 778999999998755322 257888888877777 3 3799999999999998877643221 11
Q ss_pred CeEEEE--------eCchhhhc-cC-CCEeEEEEEcCCCceeeccHHHHHHHHHhcCcEEEEEeccccccCCC-----CC
Q 001531 280 DIKVVV--------SDLKDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-----PP 344 (1058)
Q Consensus 280 gi~v~~--------v~~~~l~~-l~-~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~-----~p 344 (1058)
++++.. +|++++++ +. .+++.|++.++ .+|.+.|+++|+++||++|++++||+ .+++|.+. .+
T Consensus 155 ~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~~s-~~g~~~di~~I~~i~~~~ga~l~vDa-aq~~G~i~~~~~~~~ 232 (452)
T PTZ00094 155 YFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAGAS-AYPRDIDYKRFREICDSVGAYLMADI-AHTSGLVAAGVLPSP 232 (452)
T ss_pred eeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEeCC-CCCCccCHHHHHHHHHHcCCEEEEec-cchhccccCCCCCCC
Confidence 233332 34456666 53 24566666544 59999999999999999999999943 56777652 12
Q ss_pred CcccceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccch
Q 001531 345 GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTA 423 (1058)
Q Consensus 345 ~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~ 423 (1058)
. .|+|++++|+ |+|++| ..|++++++++.+.+..++ + ...| .. ..|+.+.
T Consensus 233 ~-~~~D~l~~S~hK~l~GP------~Gg~l~~~~~~~~~l~~~~-----~---~~~~-p~----------~~G~~~~--- 283 (452)
T PTZ00094 233 F-PYADVVTTTTHKSLRGP------RSGLIFYRKKVKPDIENKI-----N---EAVF-PG----------LQGGPHN--- 283 (452)
T ss_pred C-CCCcEEEcCCccCCCCC------CceEEEEecccchHHHHhh-----c---cccC-CC----------CCCCchH---
Confidence 2 3899999999 767544 4478888876544332111 0 0000 00 1233333
Q ss_pred hHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC---CCccEEEEecCC--HHHHHHHHHHcCce
Q 001531 424 QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL---PFFDTVKVKCAD--AHAIASAAYKIEMN 498 (1058)
Q Consensus 424 ~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~---~~~~~v~i~~~~--~~~l~~~L~~~GI~ 498 (1058)
..++++.+++ .++...+.+++++++.+++++|++.|.+.| +++... .....+.+..++ ..++.+.|.++||.
T Consensus 284 ~~iaal~~al--~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~ 360 (452)
T PTZ00094 284 HQIAAIAVQL--KEVQSPEWKEYAKQVLKNAKALAAALEKRG-YDLVTGGTDNHLVLVDLRPFGITGSKMEKLLDAVNIS 360 (452)
T ss_pred HHHHHHHHHH--HHHhChhHHHHHHHHHHHHHHHHHHHHhCC-cEEecCCCCCceEeecCCcCCCCHHHHHHHHHHCCcE
Confidence 3455666665 555566888999999999999999998887 888732 222234444444 67888999888999
Q ss_pred eee---------ccCCeEEEEeccCCC----HHHHHHHHHHHhC
Q 001531 499 LRV---------VDSNTVTASFDETTT----LEDVDKLFIVFAG 529 (1058)
Q Consensus 499 ~~~---------~~~~~lris~~~~~t----~edid~ll~al~~ 529 (1058)
+.. ..++.||+|++++|| ++|+++++++|..
T Consensus 361 vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~ 404 (452)
T PTZ00094 361 VNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDR 404 (452)
T ss_pred EecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHH
Confidence 842 124789999999987 9999999999953
No 114
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.80 E-value=2.8e-18 Score=196.59 Aligned_cols=299 Identities=20% Similarity=0.245 Sum_probs=180.9
Q ss_pred HHHHHHHHHHHHhCCC----ceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHH---HH-------H
Q 001531 633 MFNNLGEWLCTITGFD----SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TA-------A 698 (1058)
Q Consensus 633 ~~~el~~~lael~G~~----~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa---~a-------~ 698 (1058)
+..-.++.+++++|++ .+++++.||++++.++++++. +++|+|+..+..||-|.. .. .
T Consensus 67 iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl--------~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~ 138 (399)
T PF00464_consen 67 IEELAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMALL--------KPGDTIMGLSLPHGGHLSHGSSVNFKKISAS 138 (399)
T ss_dssp HHHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT---------TT-EEEEEEGGGT--GGGT-TTSHSBSSHH
T ss_pred HHHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHHH--------hhcCcEEecChhhcccccccccccccccccc
Confidence 3444667899999999 889999999999987777664 256888876666765532 21 2
Q ss_pred hCCcEEEEEcCCC-CCCCCHHHHHHHHHhcCCCeEEEEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCcccc---c
Q 001531 699 MCGMKIVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ---V 774 (1058)
Q Consensus 699 ~~G~~vv~V~~d~-~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al---~ 774 (1058)
...++++..++|+ ++.+|++++++.+.+++++ +|++...++.-.+ |++++.++|++.|++|++|.+|..++ +
T Consensus 139 ~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPk--lIi~G~S~y~~~~--d~~~~reIad~vga~l~~D~sH~~GLIa~g 214 (399)
T PF00464_consen 139 GLYFESVPYPVDPDTGLIDYDELEKLAKEHKPK--LIICGASSYPRPI--DFKRFREIADEVGAYLMADISHIAGLIAGG 214 (399)
T ss_dssp HHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--S--EEEEE-SSTSS-----HHHHHHHHHHTT-EEEEE-TTTHHHHHTT
T ss_pred cceEEEEeeeeecCCCeECHHHHHHHHhhcCCC--EEEECchhccCcc--CHHHHHHHHHhcCcEEEecccccccceehh
Confidence 3457889999984 5999999999999876555 4666554443333 79999999999999999999996544 3
Q ss_pred CcCCCCccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCC-CCCCcccCCCCCCCCC-CCC-CCCCCccchhhHH
Q 001531 775 GLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL-PSHPVVSTGGIPAPEK-SQP-LGTIAAAPWGSAL 851 (1058)
Q Consensus 775 gl~~pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~l-pg~~vg~~~d~g~~~~-~~~-t~~i~sa~~g~~~ 851 (1058)
.+..|.+. +||++++.|||| .||..|+|.+++....-- .+..... +. ..+ .++ .+...+++..+ .
T Consensus 215 ~~~~P~~~-ADvvt~sThKtl------~GPrggiI~~~~~~~~~~~~~~~~~~--~l--~~~I~~avfP~~qg~~h~~-~ 282 (399)
T PF00464_consen 215 LFPNPFPY-ADVVTGSTHKTL------RGPRGGIILTNKGSKNVDKKGKEIDE--EL--AEKIDSAVFPGLQGGPHMH-R 282 (399)
T ss_dssp SS--GCCT-SSEEEEESSGGG-------SSS-EEEEES-SEEEE-TTS-EEEH--HH--HHHHHHHHTTTT-SS--HH-H
T ss_pred eecCcccc-ceEEEeeccccc------cccCceEEEEcCCccccCCcccccHH--HH--HHHhccccCCCcccCcchh-H
Confidence 35677765 999999999999 589999999993211100 0000000 00 000 000 01111111111 2
Q ss_pred HHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHC
Q 001531 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (1058)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~ 930 (1058)
+++.|.+. ..+....+++.+++.++||+.|++.|.+. ++++.. ++..|.+++|+++ .+++..++.++|.+.
T Consensus 283 iaalAval-~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G~~v~~g---gTd~H~vlvd~~~----~~~~g~~a~~~Le~~ 354 (399)
T PF00464_consen 283 IAALAVAL-KEALSPEFKEYAKQVVKNAKALAEALQERGFKVVTG---GTDNHQVLVDLRS----FGIDGKEAEKALEEA 354 (399)
T ss_dssp HHHHHHHH-HHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-EEGGG---S-SSSEEEEEGGG----GTS-HHHHHHHHHHT
T ss_pred HHHHHHHH-hcccCHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEC---CCCCCeEEEEecc----cccchHHHHHHHHhc
Confidence 23334443 33334456899999999999999999885 888653 4567889999874 367889999999999
Q ss_pred CccccCCCCC------CCCEEEEEcCCCC----CHHHHHHHHH
Q 001531 931 GFHGPTMSWP------VPGTLMIEPTESE----SKEELDRYCD 963 (1058)
Q Consensus 931 Gi~~~~~~~p------~~~~Lris~te~~----t~eeid~fi~ 963 (1058)
||.+.....| .+..|||...+.+ .++|+..+.+
T Consensus 355 gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~ 397 (399)
T PF00464_consen 355 GIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEIAE 397 (399)
T ss_dssp TEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHHHH
T ss_pred CeeecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHHHh
Confidence 9987532112 3468999987643 3455555443
No 115
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.80 E-value=1.7e-17 Score=199.92 Aligned_cols=336 Identities=15% Similarity=0.164 Sum_probs=215.4
Q ss_pred CHHHHHHHHHHHhcCccCcCccc-cccccc-ccCCcccccccccccccccc--cCCCC-chhhhhcHHHHHHHHHHHHHH
Q 001531 569 TEHELLRYIHLLQSKELSLCHSM-IPLGSC-TMKLNATTEMMPVTWPSFAN--IHPFA-PADQAQGYQEMFNNLGEWLCT 643 (1058)
Q Consensus 569 sE~e~~r~~~~l~~~~~~~~~~~-i~lGs~-t~~~~~~~~~~~~~~~~f~~--~~P~~-p~e~~qG~~~~~~el~~~lae 643 (1058)
+-.++++.+.+.-.++.....+. ..+|+- +....+.. ..++.. |+|.. ..|.+++..+++.++.+|+|+
T Consensus 61 ~~~~~l~~l~~~l~~~sv~~~~P~ry~ghm~~~~~~pai------la~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~ 134 (608)
T TIGR03811 61 NMKDVLDELSSRLRTESVPWHSAGRYWGHMNSETLMPAI------LAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFAT 134 (608)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCccceEEECcCCCCHHHH------HHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHH
Confidence 67778888887554443222334 456652 11111111 111211 33211 126788999999999999999
Q ss_pred HhCCCce-eeecCchHHHHHHHHHHHHHHHH-----HcCC----------------------------------------
Q 001531 644 ITGFDSF-SLQPNAGAAGEYAGLMVIRAYHK-----ARGD---------------------------------------- 677 (1058)
Q Consensus 644 l~G~~~~-~l~~~sGa~ge~a~llair~y~~-----~~G~---------------------------------------- 677 (1058)
++|++.. ...+.+|+.+++.+|.++|.... ..+.
T Consensus 135 l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~ 214 (608)
T TIGR03811 135 LMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSAR 214 (608)
T ss_pred HhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccc
Confidence 9999863 35667888888877777775320 0000
Q ss_pred ----CCC-CEEEEcCCCCCccHHHHHhCCc---EEEEEcCCCCCCCCHHHHHHHHHhc---CCCeEEEEEEcCCC-cccc
Q 001531 678 ----HHR-NVCIIPVSAHGTNPATAAMCGM---KIVSVGTDAKGNINIEELRKAAEAN---RDNLSTLMVTYPST-HGVY 745 (1058)
Q Consensus 678 ----~~r-~~Vlip~saHg~~pa~a~~~G~---~vv~V~~d~~g~iD~e~L~~~i~~~---~~~taaV~vt~Pn~-~G~i 745 (1058)
..+ .++++|.++|-+.++++.++|+ .++.||+|+++++|+++|+++|++. +..+.+|+.+..+| +|.+
T Consensus 215 ~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~Gai 294 (608)
T TIGR03811 215 SGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAV 294 (608)
T ss_pred cccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCccc
Confidence 001 1688999999999999999999 5999999999999999999999742 23466788887764 8999
Q ss_pred cccHHHHHHHH---HHcCC--EEEEeccCcccccCcC-----C-----------------------------C-------
Q 001531 746 EEGIDEICKII---HDNGG--QVYMDGANMNAQVGLT-----S-----------------------------P------- 779 (1058)
Q Consensus 746 ~~dI~eI~~la---h~~g~--lv~vD~a~~~al~gl~-----~-----------------------------p------- 779 (1058)
| ||++|+++| +++|+ ++|||+|. ||+. . +
T Consensus 295 D-pl~eI~~l~~~~~~~gl~~~lHVDAAy----GG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~ 369 (608)
T TIGR03811 295 D-GIDKIVALRNKLMKEGIYFYLHVDAAY----GGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYK 369 (608)
T ss_pred C-CHHHHHHHHHHHHHcCCceeEeeeccc----cchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHh
Confidence 9 799999998 67887 69999984 3321 1 0
Q ss_pred CccCCcEEEeCCccccccCCCCCCCceeEEEEeCC-CCCCC---CCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHH
Q 001531 780 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPFL---PSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 855 (1058)
Q Consensus 780 g~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~-l~~~l---pg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~ 855 (1058)
|-.++|.++.+.||++..|+++ |.+++|+. +.+.+ +..+.....+. . ..-+...+.++..| ..++.
T Consensus 370 gle~ADSItvDpHK~g~~Py~~-----G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~--p-~~~g~~~legSR~g--a~Alk 439 (608)
T TIGR03811 370 AISEAESVTIDPHKMGYIPYSA-----GGIVIQDIRMRDVISYFATYVFEKGADI--P-ALLGAYILEGSKAG--ATAAS 439 (608)
T ss_pred cCcCceEEEeCcccccccCCCe-----EEEEEeCHHHHHHHhcCcchhccccccC--c-ccccccceecCCcc--HHHHH
Confidence 1237999999999999998775 47888853 21111 10000000000 0 00000112222222 34567
Q ss_pred HHHHHHHH--chhhHHHHHHHHHHHHHHHHHHHhcc--------CCeeeccCCCccceEEEEecccccccCCC----CHH
Q 001531 856 SYTYIAMM--GSKGLTEASKIAILNANYMAKRLEKH--------YPILFRGVNGTVAHEFIVDLRGLKNTAGI----EPE 921 (1058)
Q Consensus 856 a~a~l~~l--G~eGl~~~a~~~~~~a~yL~~~L~~~--------~~v~~~g~~~~~~~e~vv~~~~~~~~~g~----~~~ 921 (1058)
.|+.++.+ |.+|+.++.++++++|+++.+.|++. +++..- ..|.++.++|.+.+ .|. ...
T Consensus 440 lW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~--~~pdlniV~Fr~~~----~g~~~l~~~n 513 (608)
T TIGR03811 440 VWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPL--TKPDFNMVDYVFNE----KGNDDLVKMN 513 (608)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEec--CCCCcceEEEEEec----CCCccHHHHH
Confidence 89999998 99999999999999999999999873 233101 12455656666532 122 245
Q ss_pred HHHHHHHHCC
Q 001531 922 DVAKRLMDYG 931 (1058)
Q Consensus 922 ~v~k~L~~~G 931 (1058)
++.+++.++.
T Consensus 514 ~ln~~i~~~~ 523 (608)
T TIGR03811 514 KLNHAFYDYA 523 (608)
T ss_pred HHHHHHHHhh
Confidence 6777776653
No 116
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.79 E-value=1.3e-17 Score=194.04 Aligned_cols=350 Identities=16% Similarity=0.162 Sum_probs=223.0
Q ss_pred CHHHHHHHHHHHhcCccCcCcccccccccccCCcccccccccc-----cccccccCCCCchhhhhcHHHHHHHHHHHHHH
Q 001531 569 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVT-----WPSFANIHPFAPADQAQGYQEMFNNLGEWLCT 643 (1058)
Q Consensus 569 sE~e~~r~~~~l~~~~~~~~~~~i~lGs~t~~~~~~~~~~~~~-----~~~f~~~~P~~p~e~~qG~~~~~~el~~~lae 643 (1058)
...++++..+++..+... ...|.||.|.+.++...+..... .+.+ .|+| ++|..++.+.+.+++.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~--~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~-~Y~~------~~G~~~LReaia~~~~~ 80 (393)
T COG0436 10 YTFAVLAEAKAAAELKGK--EDVIDLSIGEPDFPTPEHIIEAAIEALEEGGT-HYTP------SAGIPELREAIAEKYKR 80 (393)
T ss_pred hhHHHHhHHHHHHHhcCC--CCEEEeCCCCCCCCCCHHHHHHHHHHHhcccC-CCCC------CCCCHHHHHHHHHHHHH
Confidence 334455533333333221 35678888888776655544321 1112 3443 47888888888888888
Q ss_pred HhCCCc--ee-eecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCC---CCCCCCH
Q 001531 644 ITGFDS--FS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD---AKGNINI 717 (1058)
Q Consensus 644 l~G~~~--~~-l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d---~~g~iD~ 717 (1058)
..|.+. .+ +..+.|++. +..+++.++. +++|+||+|++.+..+.....++|.+++.++++ .+..+|+
T Consensus 81 ~~~~~~~~~~eiivt~Ga~~--al~~~~~a~~-----~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~ 153 (393)
T COG0436 81 RYGLDVDPEEEIIVTAGAKE--ALFLAFLALL-----NPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDL 153 (393)
T ss_pred HhCCCCCCCCeEEEeCCHHH--HHHHHHHHhc-----CCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCH
Confidence 888553 23 555555542 3333333332 367899999998888888899999999999975 2579999
Q ss_pred HHHHHHHHhcCCCeEEEEEEcCC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCc-ccccC--cCCCCccC--Cc--EE
Q 001531 718 EELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANM-NAQVG--LTSPGYIG--AD--VC 787 (1058)
Q Consensus 718 e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~-~al~g--l~~pg~~G--aD--i~ 787 (1058)
++|+++++ ++|++|++++|| .+|.+- +.+++|+++|++||++++.|+++. +...+ +.+..+.. .| |.
T Consensus 154 ~~l~~~i~---~ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~ 230 (393)
T COG0436 154 EDLEAAIT---PKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTIT 230 (393)
T ss_pred HHHHhhcC---ccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEE
Confidence 99999998 799999999995 788874 469999999999999999999863 12222 11112221 23 55
Q ss_pred EeCCccccccCCCCCCCceeEEEEe-CCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHch-
Q 001531 788 HLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS- 865 (1058)
Q Consensus 788 ~~s~hKtf~~P~g~GGPg~G~i~~~-~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~- 865 (1058)
+.+++|+|++ .|+++|+++++ +++.+.+- . -+....+|++...|.++ .+. +-++
T Consensus 231 i~s~SK~~~m----tGwRvG~~v~~~~~l~~~~~-~-------------~~~~~~~~~~~~~Q~aa----~~a--L~~~~ 286 (393)
T COG0436 231 INSFSKTYGM----TGWRIGWVVGPPEELIAALR-K-------------LKSYLTSCAPTPAQYAA----IAA--LNGPQ 286 (393)
T ss_pred Eecccccccc----cccceeEeecChHHHHHHHH-H-------------HHHhcccCCCHHHHHHH----HHH--hcCcc
Confidence 5678898875 48999999999 55554331 0 01112234322334321 111 1222
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHH-CCccc-cCCCC
Q 001531 866 --KGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD-YGFHG-PTMSW 939 (1058)
Q Consensus 866 --eGl~~~a~~~~~~a~yL~~~L~~~--~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~-~Gi~~-~~~~~ 939 (1058)
+.+++..+...++++.+.++|.+. +.+.. .++|.++ ..++++. ..+..+++++|.+ .|+.+ |...|
T Consensus 287 ~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~-~p~Ga~Y--~~~~i~~-----~~d~~~f~~~Ll~~~gV~v~PG~~F 358 (393)
T COG0436 287 SDEVVEEMREEYRERRDLLVEALNEIGGLSVVK-PPEGAFY--LFPKIPE-----LLDSEEFAKKLLEEAGVAVVPGSGF 358 (393)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhcCCeeecc-CCCeeEE--EEeecCC-----CCCHHHHHHHHHHhCCEEEeccccc
Confidence 233444456668889999999976 44322 1334442 3455542 2578899999885 57874 55555
Q ss_pred CC---CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 940 PV---PGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 940 p~---~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
.. .+.+||+.... .+++++.++.+.+.++.
T Consensus 359 g~~~g~~~vRis~~~~--~~~l~~a~~rl~~~~~~ 391 (393)
T COG0436 359 GEPPGEGYVRLSLATS--EETLEEALRRLARFLAE 391 (393)
T ss_pred CCCCCCCeEEEEEecC--HHHHHHHHHHHHHHHHh
Confidence 42 47999999765 47777777777766543
No 117
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.79 E-value=6.7e-18 Score=198.52 Aligned_cols=314 Identities=14% Similarity=0.136 Sum_probs=203.8
Q ss_pred CcccccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHH
Q 001531 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (1058)
Q Consensus 164 n~~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea 243 (1058)
|...++|+|+..+|.++.+... .+. + |.+..+ .+....|..+...++++.+|+++|.+. +.++++|+.++++
T Consensus 49 ~~~sn~ylgl~~~p~v~~a~~~-~~~-~--~~~~~~--~s~~~~~~~~~~~~le~~la~~~g~~~--~~~~~SG~~An~~ 120 (406)
T PRK13393 49 VWCSNDYLGMGQHPAVLAAMHE-ALD-T--CGAGAG--GTRNISGTNHYHVLLEAELADLHGKEA--ALLFTSGYVSNWA 120 (406)
T ss_pred EeecccccCCCCCHHHHHHHHH-HHH-H--cCCCCc--ccccccCChHHHHHHHHHHHHHhCCCc--EEEeCCcHHHHHH
Confidence 3345789999988776666653 443 2 222221 122333555677889999999999764 7788899888888
Q ss_pred HHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe---Cchhhhc-c---C-CCEeEEEEEcC-CCceeecc
Q 001531 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS---DLKDIDY-K---S-GDVCGVLVQYP-GTEGEVLD 314 (1058)
Q Consensus 244 ~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v---~~~~l~~-l---~-~~t~~V~v~~p-n~~G~i~d 314 (1058)
++.++... .+++.|++++..|+++...++. .|.+++.+ +++++++ + + +++++|++.++ |++|.+.|
T Consensus 121 ai~~l~~~-~~g~~I~~~~~~H~s~~~~~~~----~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~ 195 (406)
T PRK13393 121 ALSTLGSR-LPGCVILSDELNHASMIEGIRH----SRAEKRIFRHNDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAP 195 (406)
T ss_pred HHHHhhcC-CCCCEEEEccchhHHHHHHHHH----cCCeEEEeCCCCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhC
Confidence 77644211 1578888899999999998853 25555544 4455554 3 2 36778888877 68999999
Q ss_pred HHHHHHHHHhcCcEEEEEeccccccCCCCCCc---------ccceEEEecC-cccccccCCCCCceEEEEEehhhhhcCC
Q 001531 315 YGDFIKNAHANGVKVVMATDLLALTILKPPGE---------LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMP 384 (1058)
Q Consensus 315 l~~I~~~a~~~galliV~a~~~slg~l~~p~~---------~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp 384 (1058)
+++|.++|+++|++++|| +.++.|++.+.|. -..||++++. |.||.+ | ||+..++++.+.+.
T Consensus 196 l~~i~~l~~~~~~~livD-ea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~---G----G~~~~~~~~~~~l~ 267 (406)
T PRK13393 196 IAEICDVAEKHGAMTYLD-EVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVM---G----GYITGSAALCDFIR 267 (406)
T ss_pred HHHHHHHHHHcCCEEEEE-CCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhccc---C----ceeeCCHHHHHHHH
Confidence 999999999999999994 5666666543321 1258888886 988742 2 67777777665441
Q ss_pred CcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcC
Q 001531 385 GRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL 464 (1058)
Q Consensus 385 grivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~ 464 (1058)
. ..+.|.. ++-..+....+..+++ .++...+. ..++..++.+++++.|+++
T Consensus 268 ~----------~~~~~~~---------------t~~~~p~~~aa~~aaL--~~~~~~~~--~~~~~~~~~~~l~~~L~~~ 318 (406)
T PRK13393 268 S----------FASGFIF---------------TTSLPPAVAAGALASV--RHLKASSA--ERERHQDRVARLRARLDKA 318 (406)
T ss_pred H----------hCcCcee---------------cCccCHHHHHHHHHHH--HHHhhCHH--HHHHHHHHHHHHHHHHHHc
Confidence 0 0000100 0000011122333333 33333332 2356678899999999988
Q ss_pred CCeEEcCCCCccEEEEecCC---HHHHHHHHHH-cCceeeec-------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 465 GTVEVQGLPFFDTVKVKCAD---AHAIASAAYK-IEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 465 G~~~l~~~~~~~~v~i~~~~---~~~l~~~L~~-~GI~~~~~-------~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
| ++++... ...+.+..++ +.++.+.|.+ +||.++.. ..+.+|++++.++|++|+++++++|..
T Consensus 319 g-~~~~~~~-~~i~~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~ 392 (406)
T PRK13393 319 G-IPHLPNP-SHIVPVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSE 392 (406)
T ss_pred C-CCcCCCC-CCeEEEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 7 7765321 1123333332 5789999987 59998643 126799999999999999999999964
No 118
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.79 E-value=4.4e-17 Score=193.70 Aligned_cols=309 Identities=18% Similarity=0.150 Sum_probs=200.0
Q ss_pred HHHHHHHHhCCCc----eeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHH------H--hCCcEE
Q 001531 637 LGEWLCTITGFDS----FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA------A--MCGMKI 704 (1058)
Q Consensus 637 l~~~lael~G~~~----~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a------~--~~G~~v 704 (1058)
.++..+++++.+. ++++++||++++++++.++. +++++|+..+-.||.|..-+ . ..+..+
T Consensus 85 ~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~--------~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~ 156 (475)
T PLN03226 85 CQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALL--------QPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYF 156 (475)
T ss_pred HHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhC--------CCCCEEEECCCCcCcchhhhhhhcccccccceEEE
Confidence 4456788899775 57788999999987777663 35688887554344433211 1 122222
Q ss_pred E--EEcCC-CCCCCCHHHHHHHHHhcCCCeEEEEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCcccccCc---CC
Q 001531 705 V--SVGTD-AKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL---TS 778 (1058)
Q Consensus 705 v--~V~~d-~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl---~~ 778 (1058)
. ..+.+ ++|.+|+++|++++.++ +++.|++.. +.+|... |+++|+++||++|++++||+||..++.+. ..
T Consensus 157 ~~~~y~~~~~~g~iD~d~Le~~l~~~--~pklIv~~~-S~~s~~~-D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~ 232 (475)
T PLN03226 157 ESMPYRLDESTGLIDYDKLEKKAMLF--RPKLIIAGA-SAYPRDW-DYARMRKIADKVGALLMCDMAHISGLVAAQEAAS 232 (475)
T ss_pred EeeeeeecCCCCCcCHHHHHHHHhhc--CCeEEEEec-CcCCCcc-CHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCC
Confidence 2 33334 45899999999999743 455555543 4467655 89999999999999999999987555432 23
Q ss_pred CCccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCC-CCCCCCCCCCCCccchhhHHHHHHHH
Q 001531 779 PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIP-APEKSQPLGTIAAAPWGSALILPISY 857 (1058)
Q Consensus 779 pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g-~~~~~~~t~~i~sa~~g~~~~~~~a~ 857 (1058)
|.+ ++|++++++|||| +||.+|+|++++++.+.+.+...+. .++. ...... .....+++ +...+++..
T Consensus 233 p~~-~~Div~~t~hK~L------~GP~Gg~I~~~~~~~~~~~~g~~~~-~d~~~~i~~a~-~~~~~g~p--~~~~iaal~ 301 (475)
T PLN03226 233 PFE-YCDVVTTTTHKSL------RGPRGGMIFFRKGPKPPKGQGEGAV-YDYEDKINFAV-FPGLQGGP--HNHTIAALA 301 (475)
T ss_pred CCC-CCeEEEecCcccc------cCCCceEEEEchhhcccccCCCccH-HHHHHHhcccc-CCccCCCc--hHHHHHHHH
Confidence 332 7999999999999 4675689999876654332221000 0000 000000 00111111 112223334
Q ss_pred HHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccC
Q 001531 858 TYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 936 (1058)
Q Consensus 858 a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~ 936 (1058)
+.+..+-..|++++.++...++++|++.|++. +++...+ ...|.++|++.+ .+++..++.+.|.+.||.+..
T Consensus 302 aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~G~~l~~~~---t~~hi~lv~~~~----~gi~~~~~~~~L~~~~I~~nk 374 (475)
T PLN03226 302 VALKQAMTPEFKAYQKQVKANAAALANRLMSKGYKLVTGG---TDNHLVLWDLRP----LGLTGSRVEKVLDLAHITLNK 374 (475)
T ss_pred HHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhCCCEEEcCC---CCCCEEEEEccC----CCCCHHHHHHHHHHCCCEECC
Confidence 44566666678888899999999999999874 7765432 234778888853 367888999999999998753
Q ss_pred CC-----CC-CCCEEEE----EcCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 001531 937 MS-----WP-VPGTLMI----EPTESESKEELDRYCDALISIREEIAQI 975 (1058)
Q Consensus 937 ~~-----~p-~~~~Lri----s~te~~t~eeid~fi~aL~~i~~e~~~~ 975 (1058)
-. .| .+.++|+ -.+...+++|++++++.|.++++....+
T Consensus 375 ~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~~~~~~ 423 (475)
T PLN03226 375 NAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTIALKI 423 (475)
T ss_pred CCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence 21 12 2467888 3445677899999999999998876553
No 119
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.79 E-value=9.5e-18 Score=197.30 Aligned_cols=314 Identities=14% Similarity=0.151 Sum_probs=202.4
Q ss_pred CcccccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHH
Q 001531 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (1058)
Q Consensus 164 n~~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea 243 (1058)
|...++|+|.+.+|..+.+... .+ .+.++. . ..+....|..+.+.++++.+|+++|.+. +.++.+|+.+.++
T Consensus 50 ~~~s~dylgl~~~p~v~~a~~~-~~-~~~~~~--~--~~s~~~~g~~~~~~~l~~~la~~~g~~~--~~~~~sG~~an~~ 121 (407)
T PRK09064 50 VWCSNDYLGMGQHPKVIEAMIE-AL-DRCGAG--A--GGTRNISGTNHYHVELERELADLHGKEA--ALVFTSGYVSNDA 121 (407)
T ss_pred EEECCCCcCCCCCHHHHHHHHH-HH-HHcCCC--C--CCcCcCccCHHHHHHHHHHHHHHhCCCc--EEEECcHHHHHHH
Confidence 3456789999987655555442 33 222211 1 1222333556677889999999999654 6677888887776
Q ss_pred HHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe---Cchhhhc-cC----CCEeEEEEEcC-CCceeecc
Q 001531 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS---DLKDIDY-KS----GDVCGVLVQYP-GTEGEVLD 314 (1058)
Q Consensus 244 ~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v---~~~~l~~-l~----~~t~~V~v~~p-n~~G~i~d 314 (1058)
++..+... .+++.|+.+...|.+....++. .++++..+ |++++++ ++ +++++|++.++ |++|.+.|
T Consensus 122 ai~~l~~~-~~~~~i~~~~~~h~s~~~~~~~----~~~~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~ 196 (407)
T PRK09064 122 TLSTLAKL-IPDCVIFSDELNHASMIEGIRR----SRCEKHIFRHNDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAP 196 (407)
T ss_pred HHHHHhCC-CCCCEEEEeCcchHHHHHHHHH----cCCcEEEECCCCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccC
Confidence 65543211 2567777888899999888753 24444443 4456665 42 46888888887 68999999
Q ss_pred HHHHHHHHHhcCcEEEEEeccccccCCCCCC-----cc----cceEEEecC-cccccccCCCCCceEEEEEehhhhhcCC
Q 001531 315 YGDFIKNAHANGVKVVMATDLLALTILKPPG-----EL----GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMP 384 (1058)
Q Consensus 315 l~~I~~~a~~~galliV~a~~~slg~l~~p~-----~~----GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp 384 (1058)
+++|.++|+++|++++| ++.+++|++.+.+ .. ..||++++. |.||.+ | ||+++++++++.+.
T Consensus 197 l~~i~~l~~~~~~~liv-DEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~---G----G~~~~~~~~~~~l~ 268 (407)
T PRK09064 197 IAEICDLADKYNALTYL-DEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVM---G----GYIAGSAALVDAVR 268 (407)
T ss_pred HHHHHHHHHHcCCEEEE-ECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhcc---C----ceEecCHHHHHHHH
Confidence 99999999999999999 4566666543322 11 358999887 988642 2 68888877766541
Q ss_pred CcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcC
Q 001531 385 GRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL 464 (1058)
Q Consensus 385 grivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~ 464 (1058)
.. .+.|.. |... ++....+..+++ .++... ....+++.++.+++.+.|+++
T Consensus 269 ~~----------~~~~~~--------------t~~~-~~~~~~aa~~al--~~~~~~--~~~~~~~~~~~~~l~~~L~~~ 319 (407)
T PRK09064 269 SY----------APGFIF--------------TTSL-PPAIAAAALASI--RHLKES--NEERERHQERAAKLKAALDAA 319 (407)
T ss_pred Hh----------Cccccc--------------cCcC-CHHHHHHHHHHH--HHHhcC--HHHHHHHHHHHHHHHHHHHHc
Confidence 00 000100 0000 011122222333 444333 344678889999999999998
Q ss_pred CCeEEcCCCCccEEEEecCC---HHHHHHHHHH-cCceeeecc-------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 465 GTVEVQGLPFFDTVKVKCAD---AHAIASAAYK-IEMNLRVVD-------SNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 465 G~~~l~~~~~~~~v~i~~~~---~~~l~~~L~~-~GI~~~~~~-------~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
| ++++.+. ...+.+.+++ +.++.++|.+ +||.++... .+++|+|++.++|++|+++++++|..
T Consensus 320 g-~~~~~~~-~~iv~i~~~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~ 393 (407)
T PRK09064 320 G-IPVMPNE-SHIVPVMVGDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVE 393 (407)
T ss_pred C-CCCCCCC-CCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 7 8776421 1123333332 6789998875 699986531 25799999999999999999999963
No 120
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.78 E-value=1.5e-17 Score=195.72 Aligned_cols=312 Identities=14% Similarity=0.152 Sum_probs=200.4
Q ss_pred ccccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHH
Q 001531 166 VYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMA 245 (1058)
Q Consensus 166 ~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~ 245 (1058)
..++|+|.+.+|..+.+.+. .+. + |.+..+ .+....|..+...++++.+|+++|.+. +.++.+|+.++++++
T Consensus 52 ~sn~yl~l~~~p~v~~a~~~-~~~-~--~~~~~~--~s~~~~~~~~~~~~Le~~la~~~g~~~--~i~~~sG~~a~~~~i 123 (410)
T PRK13392 52 CSNDYLGMGQHPDVIGAMVD-ALD-R--YGAGAG--GTRNISGTSHPHVLLERELADLHGKES--ALLFTSGYVSNDAAL 123 (410)
T ss_pred ECCCccCCCCCHHHHHHHHH-HHH-H--cCCCCc--hhhhcccChHHHHHHHHHHHHHhCCCC--EEEECcHHHHHHHHH
Confidence 35679999977665555553 332 2 222111 222334555567789999999999754 678888887777766
Q ss_pred HHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---hhhhc-c----CCCEeEEEEEcC-CCceeeccHH
Q 001531 246 MCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KDIDY-K----SGDVCGVLVQYP-GTEGEVLDYG 316 (1058)
Q Consensus 246 ~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~---~~l~~-l----~~~t~~V~v~~p-n~~G~i~dl~ 316 (1058)
.++... .+++.|+++...|.++...++ ..|.++..++. +++++ + ++++++|++.+| |++|.+.|++
T Consensus 124 ~~l~~~-~~g~~vi~~~~~h~s~~~~~~----~~g~~~~~~~~~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~ 198 (410)
T PRK13392 124 STLGKL-LPGCVILSDALNHASMIEGIR----RSGAEKQVFRHNDLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIE 198 (410)
T ss_pred HHHhcC-CCCCEEEEehhhhHHHHHHHH----HcCCeEEEEeCCCHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHH
Confidence 544211 267899999999999988664 24666665543 33433 2 357889999988 6899999999
Q ss_pred HHHHHHHhcCcEEEEEeccccccCCCCCC---------cccceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCc
Q 001531 317 DFIKNAHANGVKVVMATDLLALTILKPPG---------ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGR 386 (1058)
Q Consensus 317 ~I~~~a~~~galliV~a~~~slg~l~~p~---------~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgr 386 (1058)
+|.++|+++|++++|| +.+++|++.+.+ .-.+|+++++. |.||.+ | ||++.++++++.+-..
T Consensus 199 ~i~~l~~~~~~~livD-ea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~------G-G~~~~~~~~~~~l~~~ 270 (410)
T PRK13392 199 AICDLADRYNALTYVD-EVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCL------G-GYIAASADLIDFVRSF 270 (410)
T ss_pred HHHHHHHHcCCEEEEE-CCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhcc------c-chhhcCHHHHHHHHHh
Confidence 9999999999999994 566666543221 11468888887 888753 2 6787777766543100
Q ss_pred EEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCC
Q 001531 387 IVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGT 466 (1058)
Q Consensus 387 ivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~ 466 (1058)
.+.|.. ++.. ++....+..+++ ..+... .+..+++.++.+++++.|+++|
T Consensus 271 ----------~~~~~~--------------s~~~-~~~~~~a~~aaL--~~~~~~--~~~~~~~~~~~~~l~~~L~~~g- 320 (410)
T PRK13392 271 ----------APGFIF--------------TTAL-PPAVAAGATAAI--RHLKTS--QTERDAHQDRVAALKAKLNANG- 320 (410)
T ss_pred ----------Ccchhc--------------cCcC-CHHHHHHHHHHH--HHHhcC--HHHHHHHHHHHHHHHHHHHHcC-
Confidence 000000 0000 001222333333 232222 2345777888999999999987
Q ss_pred eEEcCCCCccEEEEecCC---HHHHHHHHH-HcCceeeecc-------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 467 VEVQGLPFFDTVKVKCAD---AHAIASAAY-KIEMNLRVVD-------SNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 467 ~~l~~~~~~~~v~i~~~~---~~~l~~~L~-~~GI~~~~~~-------~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
+++..+. .+.+.+..+. +.++.++|. ++||.++... ...+|++++..+|++|+++++++|..
T Consensus 321 ~~~~~~~-~~~~~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~ 393 (410)
T PRK13392 321 IPVMPSP-SHIVPVMVGDPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVA 393 (410)
T ss_pred CCCCCCC-CCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 8765321 1122333332 568999886 6799986531 25799999999999999999999963
No 121
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.78 E-value=2.2e-17 Score=193.22 Aligned_cols=296 Identities=18% Similarity=0.253 Sum_probs=194.9
Q ss_pred hcHHHHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEE
Q 001531 628 QGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSV 707 (1058)
Q Consensus 628 qG~~~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V 707 (1058)
.|..+...++++.+++++|.+.+. ..++|++|..+++.++. +++|+|+++...|.+....+.+.+.+.+.+
T Consensus 79 ~G~~~~~~~le~~ia~~~g~~~~i-i~~~~~~a~~~~~~~l~--------~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~ 149 (393)
T TIGR01822 79 CGTQDIHKELEAKIAAFLGTEDTI-LYASCFDANGGLFETLL--------GAEDAIISDALNHASIIDGVRLCKAKRYRY 149 (393)
T ss_pred cCChHHHHHHHHHHHHHhCCCcEE-EECchHHHHHHHHHHhC--------CCCCEEEEeccccHHHHHHHHhcCCceEEe
Confidence 477777889999999999987653 34567666644333321 356899999888877666667777776554
Q ss_pred cCCCCCCCCHHHHHHHHHhc---CCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcC------
Q 001531 708 GTDAKGNINIEELRKAAEAN---RDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT------ 777 (1058)
Q Consensus 708 ~~d~~g~iD~e~L~~~i~~~---~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~------ 777 (1058)
+ .+|+++|++++++. +.+|++|++.++ |.+|.+. ++++|+++|++||+++++|+++..+..+..
T Consensus 150 ~-----~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~-~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~ 223 (393)
T TIGR01822 150 A-----NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIA-PLDEICDLADKYDALVMVDECHATGFLGPTGRGSHE 223 (393)
T ss_pred C-----CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcC-CHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHH
Confidence 4 38999999999742 227888888766 5789987 799999999999999999999753332211
Q ss_pred CCC-ccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHH
Q 001531 778 SPG-YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPIS 856 (1058)
Q Consensus 778 ~pg-~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a 856 (1058)
..+ ..++|+++.++||+| ||+++|++++++++.+.+.... .....++.. . . ..++++
T Consensus 224 ~~~~~~~~di~~~s~sK~l------~g~r~G~~~~~~~~~~~l~~~~-----------~~~~~~~~~-~---~-~~~~a~ 281 (393)
T TIGR01822 224 LCGVMGRVDIITGTLGKAL------GGASGGFTTARKEVVELLRQRS-----------RPYLFSNSL-P---P-AVVGAS 281 (393)
T ss_pred hcCCCCCCeEEEEEChHHh------hCCCcEEEEeCHHHHHHHHHhC-----------ccceecCCC-C---H-HHHHHH
Confidence 011 125799999999987 3567899998876655431100 000001100 0 1 111122
Q ss_pred HHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCcccc
Q 001531 857 YTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 935 (1058)
Q Consensus 857 ~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~ 935 (1058)
.+.+..+ ++..+..++...+++++.+.|++. +++. ++.++. +.+.+.+ +.+..++.++|.++||.+.
T Consensus 282 ~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~---~~i~~~~-----~~~~~~l~~~L~~~gI~v~ 349 (393)
T TIGR01822 282 IKVLEML--EASNELRDRLWANTRYFRERMEAAGFDIK--PADHPI---IPVMLYD-----AVLAQRFARRLLEEGIYVT 349 (393)
T ss_pred HHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHcCCCCC--CCCCCE---EEEEeCC-----HHHHHHHHHHHHHCCeeEe
Confidence 3333333 234455566778889999999874 4432 212222 2232221 1346789999999999876
Q ss_pred CCCCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 936 TMSWPV----PGTLMIEPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 936 ~~~~p~----~~~Lris~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
...||. ...+||+++..+|++|||+++++|+++.+++
T Consensus 350 ~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 350 GFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGREL 390 (393)
T ss_pred eeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 444552 2469999999999999999999999986653
No 122
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.78 E-value=4.6e-17 Score=192.07 Aligned_cols=292 Identities=21% Similarity=0.235 Sum_probs=190.4
Q ss_pred HHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHH-----HHhCCcEEEEEcCCC
Q 001531 637 LGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-----AAMCGMKIVSVGTDA 711 (1058)
Q Consensus 637 l~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~-----a~~~G~~vv~V~~d~ 711 (1058)
.++.+++++|.+...+.+++|+++..++ ++.+. +++++|+++...|+.+... ....|++++.++.+.
T Consensus 76 ~~~~la~~~g~~~~~i~~~sgt~al~~~---l~~l~-----~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 147 (416)
T PRK00011 76 AIDRAKELFGAEYANVQPHSGSQANAAV---YFALL-----KPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDE 147 (416)
T ss_pred HHHHHHHHhCCCceeeecCCchHHHHHH---HHHhc-----CCCCEEEEeccccCCccccccccccccceeeEeecCcCc
Confidence 5668999999987666666777665433 33321 2568899998888765322 234567888998874
Q ss_pred -CCCCCHHHHHHHHHhcCCCeEEEEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCcccccC---cCCCCccCCcEE
Q 001531 712 -KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG---LTSPGYIGADVC 787 (1058)
Q Consensus 712 -~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~g---l~~pg~~GaDi~ 787 (1058)
++.+|++++++++++ .++++|+++.++ +|... |+++|+++|+++|+++++|+++..++.. ...+.. ++|++
T Consensus 148 ~~~~~d~~~l~~~i~~--~~~k~v~~~~~~-~~~~~-~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-~~di~ 222 (416)
T PRK00011 148 ETGLIDYDEVEKLALE--HKPKLIIAGASA-YSRPI-DFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-HADVV 222 (416)
T ss_pred ccCCcCHHHHHHHHHh--cCCCEEEECCCc-CCCcc-CHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-CCcEE
Confidence 488999999999973 367778876554 46555 7999999999999999999997543321 112223 78999
Q ss_pred EeCCccccccCCCCCCCceeEEEEe-CCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001531 788 HLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1058)
Q Consensus 788 ~~s~hKtf~~P~g~GGPg~G~i~~~-~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1058)
+.++||+| +||.+|+++++ +++.+.+.... ..+..++ +. ....++...+. .....+
T Consensus 223 ~~S~~K~l------~g~~gg~i~~~~~~~~~~l~~~~--------------~~~~~~~-~~-~~~~aa~~~a~-~~~~~~ 279 (416)
T PRK00011 223 TTTTHKTL------RGPRGGLILTNDEELAKKINSAV--------------FPGIQGG-PL-MHVIAAKAVAF-KEALEP 279 (416)
T ss_pred EecCCcCC------CCCCceEEEeCCHHHHHHHHHHh--------------CccccCC-cc-HHHHHHHHHHH-HHHHhh
Confidence 99999987 36777888886 45554331100 0001111 10 11112212222 223345
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCC------
Q 001531 867 GLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW------ 939 (1058)
Q Consensus 867 Gl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~------ 939 (1058)
++.+..++..+++++++++|++. +++. .+ +...|-+++++++ .+.+..++.+.|.++||.+.....
T Consensus 280 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~--~~~~~~~~i~~~~----~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~ 352 (416)
T PRK00011 280 EFKEYAQQVVKNAKALAEALAERGFRVV-SG--GTDNHLVLVDLRS----KGLTGKEAEAALEEANITVNKNAVPFDPRS 352 (416)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCeee-ec--CCCCeEEEEeCcc----cCCCHHHHHHHHHHcCcEEccCcCCCCCCC
Confidence 67778888889999999999875 4443 11 1223445666542 234678899999999998753211
Q ss_pred C-CCCEEEEEcCC----CCCHHHHHHHHHHHHHHHHH
Q 001531 940 P-VPGTLMIEPTE----SESKEELDRYCDALISIREE 971 (1058)
Q Consensus 940 p-~~~~Lris~te----~~t~eeid~fi~aL~~i~~e 971 (1058)
| .+..+|++... ..|++|+|+++++|++++..
T Consensus 353 ~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 353 PFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred CCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 1 24578986533 45689999999999987543
No 123
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.78 E-value=1.2e-17 Score=192.78 Aligned_cols=317 Identities=13% Similarity=0.078 Sum_probs=204.6
Q ss_pred CCCChHHHHHHHHhCCCcccccCCChhHHh---hHHHHHHHHHHHHHHHhcCCC-CcceEeecc-hHHHHHHHHHHhccc
Q 001531 177 NTHVPPVILRNIMENPAWYTQYTPYQAEIA---QGRLESLLNFQTMIADLTGLP-MSNASLLDE-GTAAAEAMAMCNNIQ 251 (1058)
Q Consensus 177 ~~~~p~~i~~~i~~~~~~~t~ytpyq~e~s---qG~l~~l~e~q~~ia~L~G~~-~anasl~~~-~Taa~ea~~~a~~~~ 251 (1058)
|..+|+.|.+++...-..+.+.+....+++ .-..+.+.+.++.+++|+|.+ ..++.++.+ +|.++++++.++-..
T Consensus 7 p~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~ 86 (355)
T cd00611 7 PAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGD 86 (355)
T ss_pred CCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCC
Confidence 566777776565531111111111111233 344577889999999999984 456777766 999999998887211
Q ss_pred cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch------h---hh-c-cCCCEeEEEEEc-CCCceeeccHHHHH
Q 001531 252 KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK------D---ID-Y-KSGDVCGVLVQY-PGTEGEVLDYGDFI 319 (1058)
Q Consensus 252 ~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~------~---l~-~-l~~~t~~V~v~~-pn~~G~i~dl~~I~ 319 (1058)
.+++++|++....|.+ ...++..|+++++++.+ + ++ . ++++++.|.+++ .|.+|.+. .
T Consensus 87 ~~~~~~i~~g~~~~~~-----~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~--~--- 156 (355)
T cd00611 87 KGTADYVVTGAWSAKA-----AKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAPDAAYVHYCSNETIHGVEF--D--- 156 (355)
T ss_pred CCeEEEEECCHHHHHH-----HHHHHhcCCCcEEEecccccCCCCCCCHhhcCCCCCCCEEEEeCCcccccEEc--c---
Confidence 1245666653333332 22345668877776542 2 11 2 567899998876 68999973 2
Q ss_pred HHHHhcCcEEEEEeccccccCCC-CCCcccceEEEecCcccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCc
Q 001531 320 KNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKP 398 (1058)
Q Consensus 320 ~~a~~~galliV~a~~~slg~l~-~p~~~GaDivvgs~k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~ 398 (1058)
++++.+|++++||+ ..++|..+ +..++|+ ++.++|++. |.||+|++++++++.+++++....
T Consensus 157 ~i~~~~g~~~~VDa-~qs~g~~~idv~~~~~--~~ss~~K~l-----GP~G~g~l~~~~~~~~~~~~~~~~--------- 219 (355)
T cd00611 157 EVPDTGGVPLVADM-SSNILSRPIDVSKFGV--IYAGAQKNL-----GPAGVTVVIVRKDLLGKARKITPS--------- 219 (355)
T ss_pred eecccCCCeEEEEc-cccccCCCCCHHHhCE--EEeeccccc-----CCCceEEEEECHHHHhhcccCCCC---------
Confidence 34455999999954 34666553 3456664 455565552 336789999999998877653211
Q ss_pred ceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHHHHHHhcC-CCeE-EcCC--C
Q 001531 399 ALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKL-GTVE-VQGL--P 473 (1058)
Q Consensus 399 ~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~-Gl~~ia~~~~~~a~~l~~~L~~~-G~~~-l~~~--~ 473 (1058)
+ +...+.... ....+|+|+ .+++++.+++ .++..+ |++++.+|..+++++|+++|+++ | +. .... .
T Consensus 220 -~-~~~~~~~~~-~~~~~Tpn~---~~i~~L~aal--~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~g-l~~~~~~~~~ 290 (355)
T cd00611 220 -M-LNYKTHADN-NSLYNTPPT---FAIYMMGLVL--KWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNG-FYRGPVDKRA 290 (355)
T ss_pred -c-ccHHHHHhc-CCCCCCChH---HHHHHHHHHH--HHHHHcCCHHHHHHHHHHHHHHHHHHHHhCcc-ccccCCCHHH
Confidence 0 001010010 012478887 6788888887 777777 79999999999999999999999 6 63 2211 1
Q ss_pred Ccc-EEEEecCC---HHHHHHHHHHcCceeeec--cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 474 FFD-TVKVKCAD---AHAIASAAYKIEMNLRVV--DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 474 ~~~-~v~i~~~~---~~~l~~~L~~~GI~~~~~--~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
... .++|+.++ ..++.+.+.+.|+..... ..+.+|+|+..+||++||++|+++|..
T Consensus 291 rs~~vvsf~~~~~~l~~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~ 352 (355)
T cd00611 291 RSRMNVPFRLGKEELEKEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMKE 352 (355)
T ss_pred cCceEEEEEcCChhhhHHHHHHHHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHHHHHHH
Confidence 222 36677665 345556777899975433 247899999999999999999999863
No 124
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.78 E-value=5.5e-17 Score=190.94 Aligned_cols=297 Identities=20% Similarity=0.261 Sum_probs=190.8
Q ss_pred HHHHHHHH----HHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHH-HHH--hCCcEE
Q 001531 632 EMFNNLGE----WLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA-TAA--MCGMKI 704 (1058)
Q Consensus 632 ~~~~el~~----~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa-~a~--~~G~~v 704 (1058)
+...++++ .+++++|.+.+.+.++||..|+.+++.++. +++++|+++...|+.+-. .+. ..+...
T Consensus 70 ~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A~~~~l~al~--------~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~ 141 (416)
T PRK13034 70 EFVDEVEALAIERAKQLFGCDYANVQPHSGSQANGAVYLALL--------KPGDTILGMSLSHGGHLTHGAKVSLSGKWY 141 (416)
T ss_pred hHHHHHHHHHHHHHHHHhCCCceEEecCCcHHHHHHHHHHhc--------CCCCEEEEcCccceeeeecCCcceecccee
Confidence 33455665 999999999876777889887766555541 367899999888876311 111 122222
Q ss_pred --EEEcCCC-CCCCCHHHHHHHHHhcCCCeEEEEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcC-CCC
Q 001531 705 --VSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPG 780 (1058)
Q Consensus 705 --v~V~~d~-~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~-~pg 780 (1058)
+.++.+. ++.+|++++++++++ .++++|+++.+. +|..- |+++|.++|+++|+++++|++|..+..+.. .++
T Consensus 142 ~~~~~~~~~~~~~~d~~~le~~l~~--~~~klVi~~~~~-~g~~~-dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~ 217 (416)
T PRK13034 142 NAVQYGVDRLTGLIDYDEVEELAKE--HKPKLIIAGFSA-YPREL-DFARFREIADEVGALLMVDMAHIAGLVAAGEHPN 217 (416)
T ss_pred eeEEcccccccCCcCHHHHHHHHhh--cCCeEEEECCCc-ccccc-CHHHHHHHHHHcCCEEEEeCcccccCcccCCCCC
Confidence 3444443 367999999999964 357778776654 47665 899999999999999999999865443221 122
Q ss_pred c-cCCcEEEeCCccccccCCCCCCCceeEEEEeCC-CCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHH
Q 001531 781 Y-IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYT 858 (1058)
Q Consensus 781 ~-~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~-l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a 858 (1058)
. .++|++++++||+|+ ||.+|+++++++ +...+..... .+..++.. ....++.+.+
T Consensus 218 ~~~~~Di~~~s~~K~l~------g~~GG~v~~~~~~~~~~~~~~~~--------------~~~~~~~~--~~~~aa~~~a 275 (416)
T PRK13034 218 PFPHAHVVTTTTHKTLR------GPRGGMILTNDEEIAKKINSAVF--------------PGLQGGPL--MHVIAAKAVA 275 (416)
T ss_pred CCCCceEEEEeCcccCC------CCCCeEEEECcHHHHHHHHhhcC--------------CcccCCcc--HHHHHHHHHH
Confidence 2 258999999999984 454577777653 2222110000 00001111 1112222333
Q ss_pred HHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccC-
Q 001531 859 YIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT- 936 (1058)
Q Consensus 859 ~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~- 936 (1058)
.+..+.. +..+..++..+++++|+++|++. +++...+ ...|...+++.. .+.+...+.++|.++||.+..
T Consensus 276 l~~~~~~-~~~~~~~~l~~~a~~l~~~L~~~G~~~~~~~---~~t~i~~v~~~~----~~~~~~~~~~~L~~~GI~v~~~ 347 (416)
T PRK13034 276 FGEALQP-EFKTYAKQVIANAQALAEVLKERGYDLVSGG---TDNHLLLVDLRP----KGLSGKDAEQALERAGITVNKN 347 (416)
T ss_pred HHHHhCh-hHHHHHHHHHHHHHHHHHHHHHcCCEeccCC---CCCcEEEEEcCC----CCCCHHHHHHHHHhCCcEEecc
Confidence 3333332 33455678889999999999875 5554211 123445666542 245677888999999998764
Q ss_pred -----CCCC-CCCEEEEEcCC----CCCHHHHHHHHHHHHHHHH
Q 001531 937 -----MSWP-VPGTLMIEPTE----SESKEELDRYCDALISIRE 970 (1058)
Q Consensus 937 -----~~~p-~~~~Lris~te----~~t~eeid~fi~aL~~i~~ 970 (1058)
..+| ++..||++++. .++++||++++++|.+++.
T Consensus 348 ~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~ 391 (416)
T PRK13034 348 TVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLD 391 (416)
T ss_pred CCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 2334 45689999988 6679999999999998865
No 125
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.77 E-value=5.1e-17 Score=174.21 Aligned_cols=298 Identities=15% Similarity=0.130 Sum_probs=215.9
Q ss_pred HHHHHHHHhcCCCCcceEeecchHHHHHHHHH-HhccccCCCCEEEEcC-CCCHHHHHHHHHhhcCCC--eEEEE-eCch
Q 001531 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAM-CNNIQKGKKKTFIIAS-NCHPQTIDICITRADGFD--IKVVV-SDLK 289 (1058)
Q Consensus 215 e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~-a~~~~~~~gd~Vlv~~-~~Hps~~~~~~~~a~~~g--i~v~~-v~~~ 289 (1058)
.+-..+|-|.|+...++.+.|+.+....-++. +++.. ++++||+++ ..+|+-..+....++-.+ .++.. +.+.
T Consensus 80 ~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~--~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~~~~~~P~ 157 (407)
T COG3844 80 RLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQ--EGRRVIVSEGDNFPTDLYIAEGLADLLGIGYDLEGVIAPR 157 (407)
T ss_pred HHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccC--CCceEEeecCCCCCcchhhhcchhhhhcccccceeeeChH
Confidence 34468899999998888888887765555544 44433 577777776 577887776654444333 23332 3345
Q ss_pred hhhc-cCCCEeEEEEEcCC-CceeeccHHHHHHHHHhcCcEEEEEeccccccCCC-CCCcccceEEEecC-cccccccCC
Q 001531 290 DIDY-KSGDVCGVLVQYPG-TEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGY 365 (1058)
Q Consensus 290 ~l~~-l~~~t~~V~v~~pn-~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~-~p~~~GaDivvgs~-k~lg~P~~~ 365 (1058)
++++ +++|++.|++++.| .+|...|+.+|.++||++|++++.+ =.+|.|.+. .-..+|+|+.++++ |.| .
T Consensus 158 ~~~~~~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wD-LAHsaGavp~~Lh~~gaDfaigcsyKYL-----N 231 (407)
T COG3844 158 ALEEAITDDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWD-LAHSAGAVPVDLHAAGADFAIGCSYKYL-----N 231 (407)
T ss_pred HHHHhhccceEEEEeccccccccceeeHHHHHHHHHhcCceEEee-hhcccCCcceeecccCCCeeeeeeceec-----c
Confidence 7777 88999999999988 4899999999999999999988883 245777653 44789999999999 666 3
Q ss_pred CCCce-EEEEEehhhhhcCCCcEEeeeecCCCCcceeeecc-cccccccccccCCCccchhHHHHHHHHH-HHHHhCccc
Q 001531 366 GGPHA-AFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQ-TREQHIRRDKATSNICTAQALLANMAAM-YAVYHGPEG 442 (1058)
Q Consensus 366 GGP~~-G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lq-treq~irRekaTsni~t~~~l~a~~Aa~-yl~~~g~~G 442 (1058)
||||+ +|+++.+++.+..-+++-||.- +.++ |.|.-. +--.+++| +.|+++..+.+.+-- -+.....-+
T Consensus 232 gGPGapa~l~v~~~h~e~~~~~lsgW~g--ha~p-f~m~~~y~p~~ga~r-----f~~gt~~V~s~aal~~aLDifa~~~ 303 (407)
T COG3844 232 GGPGAPAGLFVAPRHRERSWPPLSGWWG--HARP-FAMEEVYAPGPGARR-----FLCGTQPVLSLAALEGALDIFADVD 303 (407)
T ss_pred CCCCCceeEEeccccccccccccccccC--CCCc-chhhhccCcCccccc-----eeeCCcchhhhHHHhhhhhhhhhcC
Confidence 77766 8999998887777677888632 1222 444210 11245555 456666655443311 146677788
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC-C--CeEEcCC----CCccEEEEecCCHHHHHHHHHHcCceeeeccCCeEEEEecc-C
Q 001531 443 LKTIAQRVHGLAGTFALGLKKL-G--TVEVQGL----PFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDE-T 514 (1058)
Q Consensus 443 l~~ia~~~~~~a~~l~~~L~~~-G--~~~l~~~----~~~~~v~i~~~~~~~l~~~L~~~GI~~~~~~~~~lris~~~-~ 514 (1058)
|.+++++...++.|+.+-++.. + ++++.++ ..-..|++..+...++++.|.++||......++.+|+.+++ |
T Consensus 304 i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp~~~~V~qaLi~rGVigD~R~P~vlRfgftPlY 383 (407)
T COG3844 304 ITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHPHGYQVMQALIDRGVIGDFREPDVLRFGFTPLY 383 (407)
T ss_pred HHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecCcHHHHHHHHHHcCccccccCCCeeeecCccce
Confidence 9999999999999999999875 2 2677643 22345888877799999999999998766668999999998 8
Q ss_pred CCHHHHHHHHHHHh
Q 001531 515 TTLEDVDKLFIVFA 528 (1058)
Q Consensus 515 ~t~edid~ll~al~ 528 (1058)
++.+|+-..+++|.
T Consensus 384 ~~~~DVw~AV~~L~ 397 (407)
T COG3844 384 VSFVDVWDAVDALE 397 (407)
T ss_pred echhHHHHHHHHHH
Confidence 99999988888875
No 126
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.77 E-value=1.5e-16 Score=180.37 Aligned_cols=313 Identities=16% Similarity=0.201 Sum_probs=217.2
Q ss_pred HHHHHHHHHHHHHHHhCCCc--eeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccH----HHHHhCCcE
Q 001531 630 YQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMK 703 (1058)
Q Consensus 630 ~~~~~~el~~~lael~G~~~--~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~p----a~a~~~G~~ 703 (1058)
...++.++.+.|..+++.+. +.+.+++|+.|.+|++..+- .++++||+..+ |.+- ..++++|.+
T Consensus 36 F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~--------~pgdkVLv~~n--G~FG~R~~~ia~~~g~~ 105 (383)
T COG0075 36 FVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLV--------EPGDKVLVVVN--GKFGERFAEIAERYGAE 105 (383)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhcc--------CCCCeEEEEeC--ChHHHHHHHHHHHhCCc
Confidence 34567789999999999883 45666777777666654432 35678887643 3333 347889999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCc-CCCCc
Q 001531 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGY 781 (1058)
Q Consensus 704 vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl-~~pg~ 781 (1058)
++.+.+.+.-.+|+++++++++++ ++..+|.+++. +.+|+.. |+++|+++|++||++++||++. ++|+. ..+.+
T Consensus 106 v~~~~~~wg~~v~p~~v~~~L~~~-~~~~~V~~vH~ETSTGvln-pl~~I~~~~k~~g~l~iVDaVs--S~Gg~~~~vd~ 181 (383)
T COG0075 106 VVVLEVEWGEAVDPEEVEEALDKD-PDIKAVAVVHNETSTGVLN-PLKEIAKAAKEHGALLIVDAVS--SLGGEPLKVDE 181 (383)
T ss_pred eEEEeCCCCCCCCHHHHHHHHhcC-CCccEEEEEeccCcccccC-cHHHHHHHHHHcCCEEEEEecc--cCCCcccchhh
Confidence 999998776789999999999853 56777877776 4689999 8999999999999999999874 45553 35678
Q ss_pred cCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCc-ccCCCC---CC-CCCCCCCCCCCccchhhHHHHHHH
Q 001531 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPV-VSTGGI---PA-PEKSQPLGTIAAAPWGSALILPIS 856 (1058)
Q Consensus 782 ~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~v-g~~~d~---g~-~~~~~~t~~i~sa~~g~~~~~~~a 856 (1058)
||+|+++.+.+|.|+.| ||+|++.++++....+-.+-. +..-|. .. +.....+..+. + .....+.
T Consensus 182 wgiDv~itgSQK~l~~P-----PGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tp--p---v~~i~aL 251 (383)
T COG0075 182 WGIDVAITGSQKALGAP-----PGLAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTP--P---VNLIYAL 251 (383)
T ss_pred cCccEEEecCchhccCC-----CccceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCC--C---HHHHHHH
Confidence 99999999999999755 799999999765443322110 111111 00 00101111111 1 1122233
Q ss_pred HHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHH-HCCccc
Q 001531 857 YTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHG 934 (1058)
Q Consensus 857 ~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~-~~Gi~~ 934 (1058)
..++..+-+||+..+.+++..+++++++.++++ +++.. .+........++..+ .|++..++...+. ++|+.+
T Consensus 252 ~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~-~~~~~s~tvta~~~P-----~g~~~~~~~~~~~~~~g~~i 325 (383)
T COG0075 252 REALDLILEEGLEARIARHRRLAEALRAGLEALGLELFA-DPERRSPTVTAIKVP-----EGVDDKKVRRALLKEYGVEI 325 (383)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCcccc-CcccCCCceEEEECC-----CCCCcHHHHHHHHHhCCEEe
Confidence 566788889999999999999999999999986 66543 111111112334444 3666555555555 568886
Q ss_pred cCCCCCCC-CEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 935 PTMSWPVP-GTLMIEPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 935 ~~~~~p~~-~~Lris~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
..-.-|+. ..+||.-.-..+..++.+.+.+|..++.+.
T Consensus 326 ~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 326 AGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALREL 364 (383)
T ss_pred cccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHc
Confidence 54333443 689999999889999999999999998875
No 127
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.77 E-value=6.3e-17 Score=186.00 Aligned_cols=281 Identities=12% Similarity=0.058 Sum_probs=192.2
Q ss_pred HHHHHHHHHHHHhcCCCC-cceEeecc-hHHHHHHHHHHhccccCCCCEEEE-cCCCCHHHHHHHHHhhcCCCeEEEEeC
Q 001531 211 ESLLNFQTMIADLTGLPM-SNASLLDE-GTAAAEAMAMCNNIQKGKKKTFII-ASNCHPQTIDICITRADGFDIKVVVSD 287 (1058)
Q Consensus 211 ~~l~e~q~~ia~L~G~~~-anasl~~~-~Taa~ea~~~a~~~~~~~gd~Vlv-~~~~Hps~~~~~~~~a~~~gi~v~~v~ 287 (1058)
+.+.+.++.+.+++|.+. ..+.++.| ||.++|++++++. . +++++++ ..+.+..-. ...++..|+ +..+.
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~-~--~~~~~l~i~~G~fg~r~---~~~a~~~g~-~~~~~ 109 (349)
T TIGR01364 37 AVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLL-A--EGKVADYIVTGAWSKKA---AKEAKKYGV-VNVVA 109 (349)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcC-C--CCCeEEEEECCHHHHHH---HHHHHHhCC-cEEEe
Confidence 677888999999999743 34666755 9999999998763 2 5666554 344443322 233556676 44433
Q ss_pred ---------chhhhc--cCCCEeEEEEEc-CCCceeeccHHHHHHHHHhcCcEEEEEeccccccCCC-CCCcccceEEEe
Q 001531 288 ---------LKDIDY--KSGDVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVG 354 (1058)
Q Consensus 288 ---------~~~l~~--l~~~t~~V~v~~-pn~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~-~p~~~GaDivvg 354 (1058)
..+++. ++++++.|.+++ .|++|+..+ ++++.+|++++||+ ..++|..+ +..+| |++++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVDa-vss~g~~~id~~~~--d~~~~ 181 (349)
T TIGR01364 110 SGKEGNYTKIPDPSTWEISEDAAYVHYCANETIHGVEFR-----ELPDVKNAPLVADM-SSNILSRPIDVSKF--GLIYA 181 (349)
T ss_pred ccccCCCCCCCCHHhcCCCCCCCEEEEcCCCCcccEecc-----eecccCCCeEEEEc-cccccCccCCHHHc--cEEEE
Confidence 123332 456788898876 589999876 66777899999954 34665443 33455 59999
Q ss_pred cCcccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHH
Q 001531 355 SAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 434 (1058)
Q Consensus 355 s~k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~y 434 (1058)
++|++ +|.||+|++++++++++++++... ..+.+....+. ..-.+|+|+ ..++++.+++
T Consensus 182 ssqK~-----lgP~Glg~l~~s~~~~~~~~~~~~-----------~~~~~~~~~~~-~~~~~Tp~~---~~i~al~~al- 240 (349)
T TIGR01364 182 GAQKN-----IGPAGLTVVIVRKDLLGRASRITP-----------SMLNYKIHAEN-DSMYNTPPT---FAIYVSGLVF- 240 (349)
T ss_pred ecccc-----cCCCceEEEEECHHHHhhcccCCC-----------CcchHHHHHhc-CCCCCCCcH---HHHHHHHHHH-
Confidence 99443 233679999999999888754211 11111100000 011267777 7788888887
Q ss_pred HHHhCcc-cHHHHHHHHHHHHHHHHHHHhcCCCeEEcC-CC--Ccc-EEEEecCC---HHHHHHHHHHcCceeeecc--C
Q 001531 435 AVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LP--FFD-TVKVKCAD---AHAIASAAYKIEMNLRVVD--S 504 (1058)
Q Consensus 435 l~~~g~~-Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~-~~--~~~-~v~i~~~~---~~~l~~~L~~~GI~~~~~~--~ 504 (1058)
.++..+ |++++.+|..+++++++++|++++|+.... .+ ... .++|..++ ..++.+.+.++||.+.... .
T Consensus 241 -~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~ 319 (349)
T TIGR01364 241 -KWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEELEKRFLKEAEERGLVSLKGHRSV 319 (349)
T ss_pred -HHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChhHhHHHHHHHHHCCCcccCCcccc
Confidence 777788 799999999999999999999995475542 21 232 36667664 3667678888999654432 4
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHh
Q 001531 505 NTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 505 ~~lris~~~~~t~edid~ll~al~ 528 (1058)
+.+|+|+..+||.||||+|+++|.
T Consensus 320 g~vRvS~~~~nt~edid~l~~al~ 343 (349)
T TIGR01364 320 GGMRASIYNAMPLEGVQALVDFMK 343 (349)
T ss_pred CeeEEECcCCCCHHHHHHHHHHHH
Confidence 789999999999999999999986
No 128
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.76 E-value=1.2e-16 Score=184.95 Aligned_cols=294 Identities=15% Similarity=0.195 Sum_probs=185.5
Q ss_pred HHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCC-----------CCCCEEEEcCCCCCcc----HHH
Q 001531 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGD-----------HHRNVCIIPVSAHGTN----PAT 696 (1058)
Q Consensus 632 ~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~-----------~~r~~Vlip~saHg~~----pa~ 696 (1058)
+.+.++++.+++++|.+.+ +..++++.|...+++++. .+|+ .++++|++|......+ ...
T Consensus 45 ~~~~~~~~~~a~~~g~~~~-~~~~g~t~al~~al~al~----~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~ 119 (363)
T TIGR01437 45 ELVNKTGEYIANLLGVEDA-VIVSSASAGIAQSVAAVI----TRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETM 119 (363)
T ss_pred HHHHHHHHHHHHhhCCCeE-EEEcCHHHHHHHHHHHHh----cCCCcchhhcccccccccceEEEECccchhcCCchHHH
Confidence 5677899999999999865 566677766655544431 2332 1245888887322222 345
Q ss_pred HHhCCcEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEE-EEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCccccc
Q 001531 697 AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLM-VTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV 774 (1058)
Q Consensus 697 a~~~G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~-vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~ 774 (1058)
+.+.|+++++++. ++.+|+++++++|+ ++|++++ +++| |++|.+. |+++|+++||++|+++++|+++..
T Consensus 120 ~~~~g~~~v~v~~--~~~~d~~~le~ai~---~~t~ai~~v~~~~~~~g~~~-~~~~i~~~a~~~gi~vivD~a~~~--- 190 (363)
T TIGR01437 120 VRLGGGKVVEAGY--ANECSAEQLEAAIT---EKTAAILYIKSHHCVQKSML-SVEDAAQVAQEHNLPLIVDAAAEE--- 190 (363)
T ss_pred HHhcCCeEEEEcC--CCCCCHHHHHHhcC---hhceEEEEEecCCCCcCCcC-CHHHHHHHHHHcCCeEEEECCCCC---
Confidence 6789999999986 46699999999997 7888776 5554 6788776 799999999999999999999741
Q ss_pred CcCCCCccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHH
Q 001531 775 GLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILP 854 (1058)
Q Consensus 775 gl~~pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~ 854 (1058)
.+..+..+|+|++++|+||+| +||.+|+++.++++.+.+.....+. + +..+ ..+ .+.. .+.
T Consensus 191 ~~~~~~~~g~D~~~~S~~K~l------~gp~~G~l~~~~~~i~~~~~~~~~~----~-~~~~-----~~~--~~~~-gl~ 251 (363)
T TIGR01437 191 DLQKYYRLGADLVIYSGAKAI------EGPTSGLVLGKKKYIEWVKLQSKGI----G-RAMK-----VGK--ENIL-GLT 251 (363)
T ss_pred chHHHHHcCCCEEEEeCCccc------CCCceEEEEEcHHHHHHHHhccCCC----c-ceec-----cCH--HHHH-HHH
Confidence 122234678999999999988 4677889888765554432110000 0 0000 000 0111 112
Q ss_pred HHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeec-cCCCccceE--EEEecccccccCCCCHHHHHHHHHH
Q 001531 855 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFR-GVNGTVAHE--FIVDLRGLKNTAGIEPEDVAKRLMD 929 (1058)
Q Consensus 855 ~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~--~~v~~~-g~~~~~~~e--~vv~~~~~~~~~g~~~~~v~k~L~~ 929 (1058)
.+..++...+.+-+. ...+++.++.++|+++ +.+... +..+..... +.++.. ..|++..++.++|.+
T Consensus 252 aAl~~~~~~~~~~~~----~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~----~~g~~~~~l~~~L~~ 323 (363)
T TIGR01437 252 AALEQYLSTGKESGA----EMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDES----ELGMTAADVVQALRQ 323 (363)
T ss_pred HHHHHHHccCcccHH----HHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEecc----CCCCCHHHHHHHHhc
Confidence 233333333433222 2334677899999875 333211 111111112 223332 136789999999998
Q ss_pred CC--ccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001531 930 YG--FHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 968 (1058)
Q Consensus 930 ~G--i~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i 968 (1058)
+| |.+.. .+...+.+++.+.- .+++|+|+++++|+++
T Consensus 324 ~~~~I~~r~-~~~~~~~~~l~~~~-~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 324 GEPAIYTRG-YKANEGIIEIDPRS-VTGGQLDIIVERIREI 362 (363)
T ss_pred CCCCEEEee-eeecCCeEEEEeec-CCHHHHHHHHHHHHHh
Confidence 77 54432 22236789999885 5599999999999876
No 129
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.76 E-value=4.7e-17 Score=187.91 Aligned_cols=318 Identities=13% Similarity=0.078 Sum_probs=205.1
Q ss_pred cCCCCCCCCChHHHHHHHHhCC-Cc-ccccCCCh-hHHhhHHHHHHHHHHHHHHHhcCCCC-cceEee-cchHHHHHHHH
Q 001531 171 IGMGYYNTHVPPVILRNIMENP-AW-YTQYTPYQ-AEIAQGRLESLLNFQTMIADLTGLPM-SNASLL-DEGTAAAEAMA 245 (1058)
Q Consensus 171 lG~g~~~~~~p~~i~~~i~~~~-~~-~t~ytpyq-~e~sqG~l~~l~e~q~~ia~L~G~~~-anasl~-~~~Taa~ea~~ 245 (1058)
...| |..+|..|.+++...- .| -+..+.+. ..-+.--.+.+.+.++.+++|+|.+. ..+.++ .+||+++||++
T Consensus 7 ~~pG--P~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~ 84 (360)
T PRK05355 7 FSAG--PAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVP 84 (360)
T ss_pred ccCC--CCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHH
Confidence 3556 6678888765554321 11 01111110 00122223677788899999999743 234444 78899999998
Q ss_pred HHhccccCCCCEEE-EcCCCCHHHHHHHHHhhcCCCeEEEEeCc---------hhhhc--cCCCEeEEEEEc-CCCceee
Q 001531 246 MCNNIQKGKKKTFI-IASNCHPQTIDICITRADGFDIKVVVSDL---------KDIDY--KSGDVCGVLVQY-PGTEGEV 312 (1058)
Q Consensus 246 ~a~~~~~~~gd~Vl-v~~~~Hps~~~~~~~~a~~~gi~v~~v~~---------~~l~~--l~~~t~~V~v~~-pn~~G~i 312 (1058)
+.+- . ++++++ +..+.+.... ...++..|.. .++.. .++++ ++++++.|.+++ .|++|.+
T Consensus 85 ~nl~-~--~g~~~l~i~~G~fg~r~---~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~~~~~V~~th~eTstGv~ 157 (360)
T PRK05355 85 MNLL-G--GGKKADYVDTGSWSKKA---IKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLSDDAAYVHYTSNETIDGTE 157 (360)
T ss_pred HhcC-C--CCCeEEEEECCHHHHHH---HHHHHHhCCc-eEEecccccCCCCCCChhhccCCCCCCEEEEccCCCcceEe
Confidence 8763 2 455544 4444443322 2224445654 32221 12322 667888888876 6899999
Q ss_pred c-cHHHHHHHHHhcCcEEEEEeccccccCCC-CCCcccceEEEecCcccccccCCCCCceEEEEEehhhhhcCCCcEEee
Q 001531 313 L-DYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGV 390 (1058)
Q Consensus 313 ~-dl~~I~~~a~~~galliV~a~~~slg~l~-~p~~~GaDivvgs~k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~ 390 (1058)
. ||++| +|++++||+ ..++|..+ +..+| |++++++|++ +|.||+|++++++++++++.+.+ +
T Consensus 158 ~~~i~~i------~g~l~vVDa-vss~g~~~idv~~~--d~~~~ssqK~-----lgP~Glg~l~~s~~~l~~~~~~~-~- 221 (360)
T PRK05355 158 FHELPDT------GDVPLVADM-SSDILSRPIDVSKF--GLIYAGAQKN-----IGPAGLTIVIVREDLLGRALPSI-P- 221 (360)
T ss_pred cCccccc------CCCcEEEEc-CccccCccCCHHHc--cEEEEecccc-----ccCCceEEEEECHHHHhhcccCC-C-
Confidence 8 88877 799999954 34666443 34555 5999999543 23367999999999988876531 1
Q ss_pred eecCCCCcceeeecccccccccc-cccCCCccchhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 001531 391 SIDSSGKPALRVAMQTREQHIRR-DKATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVE 468 (1058)
Q Consensus 391 s~d~~g~~~~~l~lqtreq~irR-ekaTsni~t~~~l~a~~Aa~yl~~~g~~-Gl~~ia~~~~~~a~~l~~~L~~~G~~~ 468 (1058)
..+++....+ +. -.+|+|+ ..++++.+++ .++..+ |++++.+|..+++++++++|+++|.+.
T Consensus 222 ---------~~~~~~~~~~--~~~~~~Tp~~---~~i~aL~~aL--~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~ 285 (360)
T PRK05355 222 ---------SMLDYKTHAD--NDSMYNTPPT---FAIYLAGLVF--KWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYR 285 (360)
T ss_pred ---------hHHHHHHHHh--cCCccCCCcH---HHHHHHHHHH--HHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 1111111000 01 1277777 7888888887 677778 899999999999999999999998333
Q ss_pred EcCC--CCcc-EEEEecCC---HHHHHHHHHHcCceeeec--cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 469 VQGL--PFFD-TVKVKCAD---AHAIASAAYKIEMNLRVV--DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 469 l~~~--~~~~-~v~i~~~~---~~~l~~~L~~~GI~~~~~--~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
.+.. ...+ .++|..++ ..++.+.+.++||.+... ..+.+|+|+..+||.+||++|+++|+.
T Consensus 286 ~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~l~~~l~~ 354 (360)
T PRK05355 286 NPVAPEDRSRMNVPFTLADEELDKKFLAEAKAAGLVGLKGHRSVGGMRASIYNAMPLEGVQALVDFMKE 354 (360)
T ss_pred cCCChhhcCCcEEEEEcCChHHHHHHHHHHHHCCCcccCCCCccCcEEEECCCCCCHHHHHHHHHHHHH
Confidence 3322 2232 36677766 356767888899987433 247899999999999999999999963
No 130
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.76 E-value=4.7e-17 Score=187.13 Aligned_cols=301 Identities=17% Similarity=0.108 Sum_probs=189.7
Q ss_pred HHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCC-
Q 001531 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA- 711 (1058)
Q Consensus 633 ~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~- 711 (1058)
...++++.+++++|.+.+ +..++|+++...++.+++ ..++++|+++...|..+...+...|++++.+++++
T Consensus 19 ~~~~~~~~la~~~~~~~~-~~~~sgt~al~~~l~~l~-------~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 90 (352)
T cd00616 19 KVREFEKAFAEYLGVKYA-VAVSSGTAALHLALRALG-------IGPGDEVIVPSFTFVATANAILLLGATPVFVDIDPD 90 (352)
T ss_pred HHHHHHHHHHHHhCCCeE-EEECCHHHHHHHHHHHcC-------CCCCCEEEeCCcchHHHHHHHHHcCCeEEEEecCCC
Confidence 356889999999998754 445577766544433321 12568899998888777667788999999999987
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCC-CCccCCcEEEeC
Q 001531 712 KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS-PGYIGADVCHLN 790 (1058)
Q Consensus 712 ~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~-pg~~GaDi~~~s 790 (1058)
++.+|+++|+++++ +++++|+++++ +|... |+++|.++|+++|+++++|+++..+...... .+.+ .|+.+++
T Consensus 91 ~~~~d~~~l~~~i~---~~~~~v~~~~~--~G~~~-~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~~-~d~~~~S 163 (352)
T cd00616 91 TYNIDPELIEAAIT---PRTKAIIPVHL--YGNPA-DMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGTF-GDAGAFS 163 (352)
T ss_pred cCCcCHHHHHHhcC---cCCeEEEEECC--CCCcC-CHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcccC-cceeEEc
Confidence 68899999999996 78999998864 68877 7999999999999999999997533221111 1222 5788888
Q ss_pred Cc--cccccCCCCCCCceeEEEEeC-CCCCCCCCC-CcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001531 791 LH--KTFCIPHGGGGPGMGPIGVKK-HLAPFLPSH-PVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1058)
Q Consensus 791 ~h--Ktf~~P~g~GGPg~G~i~~~~-~l~~~lpg~-~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1058)
+| |+|+ ++.+|++++++ ++.+.+... ..+...+. ......+.+.... .+...++. .....+
T Consensus 164 ~~~~K~~~------~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~aa~-----~~~~l~ 228 (352)
T cd00616 164 FHPTKNLT------TGEGGAVVTNDEELAERARLLRNHGRDRDR--FKYEHEILGYNYR--LSEIQAAI-----GLAQLE 228 (352)
T ss_pred CCCCCCCc------ccCceEEEECCHHHHHHHHHHHHcCCCCCC--CccccceeeeccC--cCHHHHHH-----HHHHHH
Confidence 66 8772 23346777764 443322100 00000000 0000001111000 01111111 112234
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCC-CccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCC--
Q 001531 867 GLTEASKIAILNANYMAKRLEKH--YPILFRGVN-GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPV-- 941 (1058)
Q Consensus 867 Gl~~~a~~~~~~a~yL~~~L~~~--~~v~~~g~~-~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~-- 941 (1058)
++.+..++...+++++++.|+++ +++....+. ....+.+.+.++. ..+.+..++.+.|.++||.++....|.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~L~~~gI~~~~~~~~~~~ 305 (352)
T cd00616 229 KLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDP---EAGESRDELIEALKEAGIETRVHYPPLHH 305 (352)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECC---cCCCCHHHHHHHHHHCCCCeeeecCcccc
Confidence 55666677778999999999875 444321110 1122334454431 014678999999999999765322121
Q ss_pred ----------------------CCEEEEEcCCCCCHHHHHHHHHHHH
Q 001531 942 ----------------------PGTLMIEPTESESKEELDRYCDALI 966 (1058)
Q Consensus 942 ----------------------~~~Lris~te~~t~eeid~fi~aL~ 966 (1058)
.+.+|+++...+|++||++++++|+
T Consensus 306 ~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 306 QPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred CHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 1579999999999999999999874
No 131
>PRK07179 hypothetical protein; Provisional
Probab=99.76 E-value=1.2e-16 Score=188.08 Aligned_cols=286 Identities=17% Similarity=0.189 Sum_probs=187.7
Q ss_pred HHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCC
Q 001531 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1058)
Q Consensus 633 ~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~ 712 (1058)
...++++.+++++|.+.+ +..++|+.++.+++.++. .+++.|+++...|.+....+...|.+++.++.
T Consensus 100 ~~~~le~~la~~~g~~~~-~~~~sG~~An~~~l~~l~--------~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~--- 167 (407)
T PRK07179 100 PKPQFEKKLAAFTGFESC-LLCQSGWAANVGLLQTIA--------DPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH--- 167 (407)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHhC--------CCCCEEEEECCcCHHHHHHHHHCCCeEEEecC---
Confidence 455778899999999866 567788876654443332 13577888877776555556778888766653
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCC---CCc----cCC
Q 001531 713 GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS---PGY----IGA 784 (1058)
Q Consensus 713 g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~---pg~----~Ga 784 (1058)
.|+++|++++++ .++++|++.+|+ .+|.+. |+++|+++|+++|+++++|+++..+..|..- ... .++
T Consensus 168 --~d~~~l~~~l~~--~~~~lV~v~~v~n~tG~i~-pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~v 242 (407)
T PRK07179 168 --NDVDHLRRQIER--HGPGIIVVDSVYSTTGTIA-PLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRV 242 (407)
T ss_pred --CCHHHHHHHHHh--cCCeEEEECCCCCCCCccc-cHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCC
Confidence 699999999972 247788888874 789998 7999999999999999999998533221110 012 246
Q ss_pred cEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHc
Q 001531 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1058)
Q Consensus 785 Di~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1058)
|+++.++||+|+ +++|++++++++.+.++... .. ....+++..+ . ++++.+.+..+.
T Consensus 243 di~~~S~sK~~g-------~~~G~l~~~~~~~~~~~~~~-----------~~---~~~~~t~~~~-~-~aa~~aal~~~~ 299 (407)
T PRK07179 243 HFITASLAKAFA-------GRAGIITCPRELAEYVPFVS-----------YP---AIFSSTLLPH-E-IAGLEATLEVIE 299 (407)
T ss_pred CEEEeechHhhh-------ccCeEEEeCHHHHHHHHHhC-----------cC---eeeCCCCCHH-H-HHHHHHHHHHHh
Confidence 999999999984 24789998876655442100 00 0001111111 1 112223344432
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCC---
Q 001531 865 SKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP--- 940 (1058)
Q Consensus 865 ~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p--- 940 (1058)
. ..+..++...+++++.++|+++ +++. +. +++ +.+.+.. ..+...+.+.|.++||.+....+|
T Consensus 300 ~--~~~~~~~l~~~~~~l~~~L~~~g~~v~--~~-~~i---~~l~~~~-----~~~~~~~~~~L~~~GI~~~~~~~p~~~ 366 (407)
T PRK07179 300 S--ADDRRARLHANARFLREGLSELGYNIR--SE-SQI---IALETGS-----ERNTEVLRDALEERNVFGAVFCAPATP 366 (407)
T ss_pred c--CHHHHHHHHHHHHHHHHHHHHcCCCCC--CC-CCE---EEEEeCC-----HHHHHHHHHHHHHCCceEeeecCCCCC
Confidence 2 1345566778889999999885 4443 21 222 3333321 124567888999999975433333
Q ss_pred -CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 941 -VPGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 941 -~~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
..+.+||+++..+|++|||+++++|++++++
T Consensus 367 ~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~ 398 (407)
T PRK07179 367 KNRNLIRLSLNADLTASDLDRVLEVCREARDE 398 (407)
T ss_pred CCCceEEEEECCCCCHHHHHHHHHHHHHHHHh
Confidence 2478999999999999999999999988765
No 132
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.76 E-value=8.5e-17 Score=183.76 Aligned_cols=295 Identities=18% Similarity=0.176 Sum_probs=193.2
Q ss_pred hcHHHHHHHHHHHHHHHhCCC--c-eeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEE
Q 001531 628 QGYQEMFNNLGEWLCTITGFD--S-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1058)
Q Consensus 628 qG~~~~~~el~~~lael~G~~--~-~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~v 704 (1058)
+|..++..++++++....|.. . ..+..++|+++..+++.++. .++++|+++...|..+...++..|+++
T Consensus 36 ~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~--------~~g~~vl~~~~~~~~~~~~~~~~~~~~ 107 (350)
T cd00609 36 PGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL--------NPGDEVLVPDPTYPGYEAAARLAGAEV 107 (350)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC--------CCCCEEEEcCCCchhHHHHHHHCCCEE
Confidence 566666666666666665531 2 23445555555433333221 246789999999998888899999999
Q ss_pred EEEcCCCCCCCCH--HHHHHHHHhcCCCeEEEEEEcCC-Ccccccc--cHHHHHHHHHHcCCEEEEeccCccccc-Cc--
Q 001531 705 VSVGTDAKGNINI--EELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQV-GL-- 776 (1058)
Q Consensus 705 v~V~~d~~g~iD~--e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~--dI~eI~~lah~~g~lv~vD~a~~~al~-gl-- 776 (1058)
+.++.++++..+. +.++.+++ +++++|++++|+ .+|.+.+ ++++|.++||++|+++++|+++..... +.
T Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~~---~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~ 184 (350)
T cd00609 108 VPVPLDEEGGFLLDLELLEAAKT---PKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPP 184 (350)
T ss_pred EEEecccccCCccCHHHHHhhcC---ccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCccc
Confidence 9999988877665 66666654 789999999985 6898862 355666899999999999998742211 11
Q ss_pred ---CCCCccCCcEEEeCCccccccCCCCCCCceeEEEEeC-CCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHH
Q 001531 777 ---TSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1058)
Q Consensus 777 ---~~pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~-~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~ 852 (1058)
..++..+.|++..++||+|+ .+|+++|++++++ .+.+.+.... ...+.+.+ . ..
T Consensus 185 ~~~~~~~~~~~~~~~~s~~K~~~----~~g~~~G~i~~~~~~~~~~~~~~~------------~~~~~~~~--~----~~ 242 (350)
T cd00609 185 PALALLDAYERVIVLRSFSKTFG----LPGLRIGYLIAPPEELLERLKKLL------------PYTTSGPS--T----LS 242 (350)
T ss_pred ccccCcCccCcEEEEeecccccC----CcccceEEEecCHHHHHHHHHHHH------------HhcccCCC--h----HH
Confidence 22445678999999999985 3467899999988 6665543110 00011111 1 11
Q ss_pred HHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCC
Q 001531 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 931 (1058)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~G 931 (1058)
..++...+.... +++++..++..++++++.+.|++. ..... .+.. ...+++.++. +.+...+.+.|.++|
T Consensus 243 ~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~--g~~~~~~~~~-----~~~~~~~~~~l~~~g 313 (350)
T cd00609 243 QAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVV-KPSG--GFFLWLDLPE-----GDDEEFLERLLLEAG 313 (350)
T ss_pred HHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCc--cEEEEEecCC-----CChHHHHHHHHHhCC
Confidence 112233333222 667778888889999999999886 22211 1111 2224455441 224567777888889
Q ss_pred ccccCCC-CC--CCCEEEEEcCCCCCHHHHHHHHHHHH
Q 001531 932 FHGPTMS-WP--VPGTLMIEPTESESKEELDRYCDALI 966 (1058)
Q Consensus 932 i~~~~~~-~p--~~~~Lris~te~~t~eeid~fi~aL~ 966 (1058)
+.+.... |. ....+||++... ++|+++++++|+
T Consensus 314 i~i~~~~~~~~~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 314 VVVRPGSAFGEGGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred EEEecccccccCCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 9876432 22 357899999887 999999999886
No 133
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.76 E-value=1.1e-17 Score=182.48 Aligned_cols=311 Identities=15% Similarity=0.168 Sum_probs=220.3
Q ss_pred cccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHH
Q 001531 167 YKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAM 246 (1058)
Q Consensus 167 ~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~ 246 (1058)
.++|||++-||.+..+.-+ .| ++.+-...-| +-..|+-+-..+++..+|+|-+-|. +.+|.+-.-|..+.+.
T Consensus 178 SNDYLgms~Hp~V~~A~~~-tl-~~hG~GAGGT----RNIsG~s~~hv~LE~eLA~LHqK~a--ALlFsSCfVANDstLf 249 (570)
T KOG1360|consen 178 SNDYLGMSRHPEVLDAMHD-TL-DRHGAGAGGT----RNISGHSKHHVRLEAELADLHQKEA--ALLFSSCFVANDSTLF 249 (570)
T ss_pred cCccccccCChHHHHHHHH-HH-HHcCCCcCCc----cccCCCCchhhhHHHHHHHHhcCcc--eeeeeeeeeccchHHH
Confidence 4689999998877766654 33 3333233334 3456777788889999999999887 6677777667777655
Q ss_pred HhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhhc-c---CC-CEeEEEEEcC-CCceeeccHHHHHH
Q 001531 247 CNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-K---SG-DVCGVLVQYP-GTEGEVLDYGDFIK 320 (1058)
Q Consensus 247 a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~~l~~-l---~~-~t~~V~v~~p-n~~G~i~dl~~I~~ 320 (1058)
.+.-. =++-+|+.+..+|.|.+..++. ++--.+-+++.|+++|++ + ++ -.+.|.+... ++.|.|.||+||++
T Consensus 250 tLak~-lpgcei~SD~gNHASMI~GIrn-s~v~K~IFrHND~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcD 327 (570)
T KOG1360|consen 250 TLAKK-LPGCEIFSDEGNHASMIQGIRN-SRVPKHIFRHNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCD 327 (570)
T ss_pred HHHHH-CCCcEEeccccchHHHHHHhhh-cCCcceeeccCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHH
Confidence 44211 2788999999999999999985 333466778899998886 3 33 2466666654 89999999999999
Q ss_pred HHHhcCcEEEEEeccccccCCCCCCc-----c----cceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEee
Q 001531 321 NAHANGVKVVMATDLLALTILKPPGE-----L----GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGV 390 (1058)
Q Consensus 321 ~a~~~galliV~a~~~slg~l~~p~~-----~----GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~ 390 (1058)
++|++|++..+ ++.++.|+..+-|. - -+||+.|+. |+||. .| ||++.+..+++.+.
T Consensus 328 vah~yGAiTFl-DEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGc---VG----GYIAat~~LvDmiR------ 393 (570)
T KOG1360|consen 328 VAHKYGAITFL-DEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGC---VG----GYIAATRKLVDMIR------ 393 (570)
T ss_pred HHHHhCceeee-ehhhhhccccCCCCCccccCCcchhhhhcccchhhhccc---cc----ceehhhhhHHHHHH------
Confidence 99999999999 56788888765432 2 269999997 99975 34 69998888776541
Q ss_pred eecCCCCcceeeecccccccccccccCCCccchhHHH----HHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCC
Q 001531 391 SIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALL----ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGT 466 (1058)
Q Consensus 391 s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~----a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~ 466 (1058)
--|-.+|+|++..+ +...++- -+-..|| +.+++..+++..|+++.|.++|
T Consensus 394 -----------------------SyAaGFIFTTSLPP~vl~GAleaVr-~lk~~eg-~~lR~~hqrnv~~~kq~l~~~G- 447 (570)
T KOG1360|consen 394 -----------------------SYAAGFIFTTSLPPMVLAGALEAVR-ILKSEEG-RVLRRQHQRNVKYVKQLLMELG- 447 (570)
T ss_pred -----------------------HhcCceEEecCCChHHHHhHHHHHH-HHhhhhh-HHHHHHHHHHHHHHHHHHHHcC-
Confidence 11223444444333 3333331 1223445 3456667788999999999998
Q ss_pred eEEcCCCCccEEEEecCC---HHHHHHHHHH-cCceeeec-------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001531 467 VEVQGLPFFDTVKVKCAD---AHAIASAAYK-IEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 467 ~~l~~~~~~~~v~i~~~~---~~~l~~~L~~-~GI~~~~~-------~~~~lris~~~~~t~edid~ll~al~ 528 (1058)
+.++..| .+.+.+.+.+ +.++.+.|.. +||++..+ ....+||.+|+.||.+-++.|++++.
T Consensus 448 iPVi~~p-SHIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~ 519 (570)
T KOG1360|consen 448 IPVIPNP-SHIIPVRVGDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALL 519 (570)
T ss_pred CcccCCC-cceeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHH
Confidence 8877432 2344454444 6788888874 69988543 13689999999999999999998885
No 134
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.76 E-value=9e-17 Score=188.73 Aligned_cols=295 Identities=18% Similarity=0.210 Sum_probs=188.8
Q ss_pred cHHHHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEc
Q 001531 629 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (1058)
Q Consensus 629 G~~~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~ 708 (1058)
|..+...++++.+++++|.+. .+..++|++++.+++.++..+ .+++.|+.....|++....+...|++++.++
T Consensus 87 g~~~~~~~Le~~la~~~g~~~-~l~~~sG~~an~~ai~~l~~~------~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~ 159 (402)
T TIGR01821 87 GTNIPHVELEAELADLHGKES-ALVFTSGYVANDATLATLAKI------IPGCVIFSDELNHASMIEGIRHSGAEKFIFR 159 (402)
T ss_pred CCcHHHHHHHHHHHHHhCCCe-EEEECchHHHHHHHHHHhhCC------CCCCEEEEcchHhHHHHHHHHHcCCeEEEEC
Confidence 334456689999999999765 466778887765554443211 1345666665677666555677888877665
Q ss_pred CCCCCCCCHHHHHHHHHhcCC-CeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCc-C-----CCC
Q 001531 709 TDAKGNINIEELRKAAEANRD-NLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-T-----SPG 780 (1058)
Q Consensus 709 ~d~~g~iD~e~L~~~i~~~~~-~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl-~-----~pg 780 (1058)
. .|+++++++++..++ ++++|++++|+ .+|.+. |+++|+++|+++|+++++|+++..+..+- . .++
T Consensus 160 ~-----~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~-~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~ 233 (402)
T TIGR01821 160 H-----NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIA-PIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDG 233 (402)
T ss_pred C-----CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCcc-CHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhcc
Confidence 4 488999998875433 68889999984 689988 79999999999999999999986433211 0 011
Q ss_pred -ccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHH
Q 001531 781 -YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 859 (1058)
Q Consensus 781 -~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~ 859 (1058)
...+|++..++.|.|+. +| |++++++++.+.+.... . +.+.+ ..+++..++++.+.
T Consensus 234 ~~~~~div~~t~sKa~g~------~G-G~i~~~~~~~~~l~~~~-----------~----~~~~t-~~~~~~~~aaa~aa 290 (402)
T TIGR01821 234 LMHRIDIIEGTLAKAFGV------VG-GYIAASRKLIDAIRSYA-----------P----GFIFT-TSLPPAIAAGATAS 290 (402)
T ss_pred CCCCCeEEEEechhhhcc------CC-ceeecCHHHHHHHHHhC-----------c----Cceec-CcCCHHHHHHHHHH
Confidence 11368888889998853 33 67777766554432100 0 00000 00122233334445
Q ss_pred HHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHH-CCccccCC
Q 001531 860 IAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD-YGFHGPTM 937 (1058)
Q Consensus 860 l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~-~Gi~~~~~ 937 (1058)
+..+..+ .+..++..++++++.++|++. +++. ++.+++ +.+.+.. ...+.++.++|.+ +||.+...
T Consensus 291 L~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~i---~~i~~~~-----~~~a~~~~~~L~~~~Gi~v~~~ 358 (402)
T TIGR01821 291 IRHLKES--QDLRRAHQENVKRLKNLLEALGIPVI--PNPSHI---VPVIIGD-----AALCKKVSDLLLNKHGIYVQPI 358 (402)
T ss_pred HHHhhcC--HHHHHHHHHHHHHHHHHHHHcCCCcC--CCCCCE---EEEEeCC-----HHHHHHHHHHHHhcCCEEEEeE
Confidence 5554433 333344457889999999875 4432 112222 2222220 1135689999875 69987655
Q ss_pred CCC-C---CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 938 SWP-V---PGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 938 ~~p-~---~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
.+| + .+.+||+++..+|++|||+++++|++++++
T Consensus 359 ~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~ 396 (402)
T TIGR01821 359 NYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDR 396 (402)
T ss_pred CCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 454 2 257999999999999999999999998765
No 135
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.76 E-value=9.5e-17 Score=184.29 Aligned_cols=275 Identities=18% Similarity=0.198 Sum_probs=187.6
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 001531 207 QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 286 (1058)
Q Consensus 207 qG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v 286 (1058)
.|......++++.+++++|++. ..++.+||+++.+++.++. ++||+|++++..|+++...++ ..|++++.+
T Consensus 42 ~~~~~~~~~l~~~la~~~~~~~--~iv~~sg~~a~~~~~~~~~---~~gd~Vl~~~~~~~~~~~~~~----~~g~~~~~~ 112 (349)
T cd06454 42 SGTSDLHEELEEELAEFHGKEA--ALVFSSGYAANDGVLSTLA---GKGDLIISDSLNHASIIDGIR----LSGAKKRIF 112 (349)
T ss_pred cCCchHHHHHHHHHHHHhCCCC--EEEeccHHHHHHHHHHHhc---CCCCEEEEehhhhHHHHHHHH----HcCCceEEe
Confidence 3455566778899999999874 5677788888777666552 379999999999999887764 357777765
Q ss_pred ---Cchhhhc-cC-----CCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCC---------CCCcc
Q 001531 287 ---DLKDIDY-KS-----GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK---------PPGEL 347 (1058)
Q Consensus 287 ---~~~~l~~-l~-----~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~---------~p~~~ 347 (1058)
+.+++++ +. +.+++|++.++ |.+|.+.|+++|+++||++|+++++| +.++.|.+. .....
T Consensus 113 ~~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD-~a~~~g~~~~~~~~~~~~~~~~~ 191 (349)
T cd06454 113 KHNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVD-EAHSVGVYGPHGRGVEEFGGLTD 191 (349)
T ss_pred cCCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEE-ccccccccCCCCCChhhhccccc
Confidence 3455655 43 34677777776 68999999999999999999999994 344544332 12356
Q ss_pred cceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHH
Q 001531 348 GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL 426 (1058)
Q Consensus 348 GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l 426 (1058)
++|++++|+ |.|+. |+ |+++.++++.+.+.... ..+. ..++.| ....
T Consensus 192 ~~~i~~~s~sK~~~~------~g-G~i~~~~~~~~~~~~~~----------~~~~------------~~~~~~---~~~~ 239 (349)
T cd06454 192 DVDIIMGTLGKAFGA------VG-GYIAGSKELIDYLRSYA----------RGFI------------FSTSLP---PAVA 239 (349)
T ss_pred cCcEEEeechhhhcc------cC-CEEECCHHHHHHHHHhc----------hhhh------------ccCCCC---HHHH
Confidence 899999998 87753 22 67777777665441100 0000 001111 1223
Q ss_pred HHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecC-C--HHHHHHHHHHcCceeeec-
Q 001531 427 LANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA-D--AHAIASAAYKIEMNLRVV- 502 (1058)
Q Consensus 427 ~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~-~--~~~l~~~L~~~GI~~~~~- 502 (1058)
.++.+++ .++.. .+++.++..++.+++.+.|+++| +++...+....+.+..+ . ..++.+.|.++||.+...
T Consensus 240 ~a~~~~l--~~~~~--~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~ 314 (349)
T cd06454 240 AAALAAL--EVLQG--GPERRERLQENVRYLRRGLKELG-FPVGGSPSHIIPPLIGDDPAKAVAFSDALLERGIYVQAIR 314 (349)
T ss_pred HHHHHHH--HHHhc--CHHHHHHHHHHHHHHHHHHHhcC-CcccCCCCCcEEEEeCCChHHHHHHHHHHHhCCceEEEec
Confidence 3344443 33322 46678899999999999999987 77664321112222223 2 788999999999987542
Q ss_pred ------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001531 503 ------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 503 ------~~~~lris~~~~~t~edid~ll~al~ 528 (1058)
..+.+|++++.+++++|+++++++|.
T Consensus 315 ~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~ 346 (349)
T cd06454 315 YPTVPRGTARLRISLSAAHTKEDIDRLLEALK 346 (349)
T ss_pred CCccCCCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence 13689999999999999999999985
No 136
>PLN02822 serine palmitoyltransferase
Probab=99.75 E-value=1.2e-16 Score=191.04 Aligned_cols=279 Identities=12% Similarity=0.104 Sum_probs=188.4
Q ss_pred hHHhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeE
Q 001531 203 AEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIK 282 (1058)
Q Consensus 203 ~e~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~ 282 (1058)
|+..-|+.+.+.++++.+|+++|.+. +.+|.+|.+++.+++.++. +++|.|+++...|.++...++. .+.+
T Consensus 146 ~r~~yg~~~~~~~Lee~La~~~~~~~--~i~~s~G~~a~~sai~a~~---~~gd~Ii~d~~~H~s~~~~~~l----s~~~ 216 (481)
T PLN02822 146 PRGFYGTIDVHLDCETKIAKFLGTPD--SILYSYGLSTIFSVIPAFC---KKGDIIVADEGVHWGIQNGLYL----SRST 216 (481)
T ss_pred cCccccCHHHHHHHHHHHHHHhCCCC--EEEECCHHHHHHHHHHHhC---CCCCEEEEeCCccHHHHHHHHH----cCCe
Confidence 44456778889999999999999764 5677777667777776652 3799999999999999877643 2456
Q ss_pred EEEeCc---hhhhc-c---C------CCE-eEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCC--
Q 001531 283 VVVSDL---KDIDY-K---S------GDV-CGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPG-- 345 (1058)
Q Consensus 283 v~~v~~---~~l~~-l---~------~~t-~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~-- 345 (1058)
+++++. ++++. + . +++ ++|++..+ +++|.+.|+++|.++|+++|+++++ ++.+++|++...|
T Consensus 217 ~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIv-DEa~s~gvlG~~G~G 295 (481)
T PLN02822 217 IVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLL-DESNSFGVLGKSGRG 295 (481)
T ss_pred EEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEE-ECCccccccCCCCCC
Confidence 666543 34432 2 1 234 56666555 6799999999999999999999999 5778888775433
Q ss_pred ---cc-----cceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeeccccccccccccc
Q 001531 346 ---EL-----GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKA 416 (1058)
Q Consensus 346 ---~~-----GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irReka 416 (1058)
.+ ..||+++|. |+|+.+ | ||+++++++++.+. ..+
T Consensus 296 ~~e~~~v~~~~~dii~~s~sKalg~~---G----G~i~g~~~ii~~~~-----------------------------~~~ 339 (481)
T PLN02822 296 LSEHFGVPIEKIDIITAAMGHALATE---G----GFCTGSARVVDHQR-----------------------------LSS 339 (481)
T ss_pred hHHHcCCCCCCCeEEEecchhhhhhC---C----eEEEcCHHHHHHHH-----------------------------hcC
Confidence 23 358999986 998632 2 78888887766541 011
Q ss_pred CCCccchh-HHHHHHHHH-HHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCC--CccEEEEecC------C--
Q 001531 417 TSNICTAQ-ALLANMAAM-YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP--FFDTVKVKCA------D-- 484 (1058)
Q Consensus 417 Tsni~t~~-~l~a~~Aa~-yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~--~~~~v~i~~~------~-- 484 (1058)
.++++++. +.+...|++ .+..+ .+ ..++.++++++.+++++.|+++.|+++.... ++-.+.+... +
T Consensus 340 ~~~~fsa~lPp~~~~Aa~~aL~~l-~~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l~l~~~~~~~~~~~~ 417 (481)
T PLN02822 340 SGYVFSASLPPYLASAAITAIDVL-ED-NPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFLHLEKSTGSAKEDLS 417 (481)
T ss_pred CceeeccccCHHHHHHHHHHHHHH-Hh-CHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEEEeCCCcccccchHH
Confidence 12222211 122222222 12222 12 2567888999999999999987237765322 2212333211 1
Q ss_pred -HHHHHHHHH-HcCceeeec---------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 485 -AHAIASAAY-KIEMNLRVV---------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 485 -~~~l~~~L~-~~GI~~~~~---------~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
..++++.|. ++||.+... .+..+|++++..+|++||++++++|..
T Consensus 418 ~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~ 473 (481)
T PLN02822 418 LLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKR 473 (481)
T ss_pred HHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 367899987 789987542 124699999999999999999999964
No 137
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.75 E-value=9.4e-17 Score=184.34 Aligned_cols=288 Identities=18% Similarity=0.195 Sum_probs=187.6
Q ss_pred HHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCC
Q 001531 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA 711 (1058)
Q Consensus 632 ~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~ 711 (1058)
....++++.+++++|.+.. +.+++|+++.++.+.++. +++++|++++..|+.....+...|.+++.++.
T Consensus 46 ~~~~~l~~~la~~~~~~~~-iv~~sg~~a~~~~~~~~~--------~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-- 114 (349)
T cd06454 46 DLHEELEEELAEFHGKEAA-LVFSSGYAANDGVLSTLA--------GKGDLIISDSLNHASIIDGIRLSGAKKRIFKH-- 114 (349)
T ss_pred hHHHHHHHHHHHHhCCCCE-EEeccHHHHHHHHHHHhc--------CCCCEEEEehhhhHHHHHHHHHcCCceEEecC--
Confidence 3456788999999998754 666777766543333221 25678999988887666667788999988863
Q ss_pred CCCCCHHHHHHHHHhcC--CCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCc-------CCCCc
Q 001531 712 KGNINIEELRKAAEANR--DNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-------TSPGY 781 (1058)
Q Consensus 712 ~g~iD~e~L~~~i~~~~--~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl-------~~pg~ 781 (1058)
+|++++++++++.. +++++|++++| |.+|.+. |+++|+++|+++|+++++|+++..+..+. .....
T Consensus 115 ---~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~-~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~ 190 (349)
T cd06454 115 ---NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIA-PLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLT 190 (349)
T ss_pred ---CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCcc-CHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhcccc
Confidence 68899999997532 46788888887 4689998 79999999999999999999975322111 11134
Q ss_pred cCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHH
Q 001531 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 861 (1058)
Q Consensus 782 ~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~ 861 (1058)
.+.|+++.++||+|+. +| |+++.++++.+.+...... . ..++... ...++++.+.+.
T Consensus 191 ~~~~i~~~s~sK~~~~------~g-G~i~~~~~~~~~~~~~~~~---------~-~~~~~~~------~~~~~a~~~~l~ 247 (349)
T cd06454 191 DDVDIIMGTLGKAFGA------VG-GYIAGSKELIDYLRSYARG---------F-IFSTSLP------PAVAAAALAALE 247 (349)
T ss_pred ccCcEEEeechhhhcc------cC-CEEECCHHHHHHHHHhchh---------h-hccCCCC------HHHHHHHHHHHH
Confidence 5789999999999853 33 6777776654332111000 0 0001111 111222233344
Q ss_pred HHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCC
Q 001531 862 MMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP 940 (1058)
Q Consensus 862 ~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p 940 (1058)
.+-. +.+..++...+++++.+.|++. +++. ++.+.. .+++.+. .+.+..++.++|.++||.+....++
T Consensus 248 ~~~~--~~~~~~~~~~~~~~l~~~l~~~g~~~~--~~~~~~--~~~~~~~-----~~~~~~~~~~~L~~~gI~~~~~~~~ 316 (349)
T cd06454 248 VLQG--GPERRERLQENVRYLRRGLKELGFPVG--GSPSHI--IPPLIGD-----DPAKAVAFSDALLERGIYVQAIRYP 316 (349)
T ss_pred HHhc--CHHHHHHHHHHHHHHHHHHHhcCCccc--CCCCCc--EEEEeCC-----ChHHHHHHHHHHHhCCceEEEecCC
Confidence 3322 3445667778889999999875 3332 211111 1222121 1235688999999999987533332
Q ss_pred ----CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001531 941 ----VPGTLMIEPTESESKEELDRYCDALISI 968 (1058)
Q Consensus 941 ----~~~~Lris~te~~t~eeid~fi~aL~~i 968 (1058)
..+.+||++...++++|+++++++|+++
T Consensus 317 ~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 317 TVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred ccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 1468999999889999999999999864
No 138
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.75 E-value=3.8e-17 Score=186.84 Aligned_cols=287 Identities=16% Similarity=0.136 Sum_probs=181.7
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHH---HHHhCCcEEEEEcCC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TAAMCGMKIVSVGTD 710 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa---~a~~~G~~vv~V~~d 710 (1058)
..++++.+++++| +...+..++|+++. .++++.+. +++++|+++.+.|.+... .+.+.|++++.++.+
T Consensus 34 ~~~l~~~~a~~~g-~~~~~~~~~gt~a~---~~~~~~l~-----~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 104 (338)
T cd06502 34 TAKLEARAAELFG-KEAALFVPSGTAAN---QLALAAHT-----QPGGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGE 104 (338)
T ss_pred HHHHHHHHHHHhC-CCeEEEecCchHHH---HHHHHHhc-----CCCCeEEEecCcceeeecCCcHHHHcCceEEeecCC
Confidence 5578899999999 54455566676554 33444331 256789999888865432 345689999999985
Q ss_pred CCCCCCHHHHHHHHHhc----CCCeEEEEEEcCCCcccc-c-ccHHHHHHHHHHcCCEEEEeccCcccc-cCcC-CC--C
Q 001531 711 AKGNINIEELRKAAEAN----RDNLSTLMVTYPSTHGVY-E-EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLT-SP--G 780 (1058)
Q Consensus 711 ~~g~iD~e~L~~~i~~~----~~~taaV~vt~Pn~~G~i-~-~dI~eI~~lah~~g~lv~vD~a~~~al-~gl~-~p--g 780 (1058)
. +.+|+++|++++++. .+++++|++++||..|.+ . .++++|+++|+++|+++++|+++.... .... .. .
T Consensus 105 ~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~ 183 (338)
T cd06502 105 N-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTY 183 (338)
T ss_pred C-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHH
Confidence 4 789999999999732 137899999999755643 2 378999999999999999999863211 0111 11 1
Q ss_pred ccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHH
Q 001531 781 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 860 (1058)
Q Consensus 781 ~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l 860 (1058)
..++|+++.++||+|+.| |+++++.++++.+.+...... ..++... ++..+ ++.+
T Consensus 184 ~~~~d~~~~s~sK~~~~~------~g~~~~~~~~~~~~~~~~~~~------------~~~~~~~----~~~~~---~a~~ 238 (338)
T cd06502 184 KSGVDSVSFCLSKGGGAP------VGAVVVGNRDFIARARRRRKQ------------AGGGMRQ----SGFLA---AAGL 238 (338)
T ss_pred HhcCCEEEEeccccCCCc------cceEEECCHHHHHHHHHHHHH------------hCCChhh----HHHHH---HHHH
Confidence 247899999999999644 435566666655443210000 0001110 11111 2223
Q ss_pred HHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHH---HCCccccC
Q 001531 861 AMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM---DYGFHGPT 936 (1058)
Q Consensus 861 ~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~---~~Gi~~~~ 936 (1058)
..+...++.+..++...+++++.+.|++. +.+ ++ +..+-+.+..+. ......++.+.|. ++|+.+..
T Consensus 239 ~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~----~~~~~~~v~~~~----~~~~~~~l~~~l~~~~~~gi~~~~ 309 (338)
T cd06502 239 AALENDLWLRRLRHDHEMARRLAEALEELGGLE-SE----VQTNIVLLDPVE----ANAVFVELSKEAIERRGEGVLFYA 309 (338)
T ss_pred HHhcCchHHHHHHHHHHHHHHHHHHHHhcCCCc-cc----ccCCeEEEecCC----ccHHHHHHHHHHHHhhhCCEEEEe
Confidence 33444456666678888899999999875 322 21 122334444321 0112234445554 67887653
Q ss_pred CCCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 001531 937 MSWPVPGTLMIEPTESESKEELDRYCDALIS 967 (1058)
Q Consensus 937 ~~~p~~~~Lris~te~~t~eeid~fi~aL~~ 967 (1058)
.. .+.+||+++..+|++|++++++++++
T Consensus 310 ~~---~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 310 WG---EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred cC---CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 32 27899999999999999999999864
No 139
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.75 E-value=3.1e-17 Score=188.82 Aligned_cols=265 Identities=18% Similarity=0.200 Sum_probs=180.3
Q ss_pred HHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--
Q 001531 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 288 (1058)
Q Consensus 211 ~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~-- 288 (1058)
..|.|.|+.+|+++|++.+.. +++|+|.++.++++|+. ++||+||+++++|.|+...+.. .|++++++++
T Consensus 66 G~I~eAe~~aA~~fGAd~t~f-lvnGsT~g~~a~i~a~~---~~gd~VLv~RN~HkSv~~alil----~ga~Pvyi~p~~ 137 (417)
T PF01276_consen 66 GIIKEAEELAARAFGADKTFF-LVNGSTSGNQAMIMALC---RPGDKVLVDRNCHKSVYNALIL----SGAIPVYIPPED 137 (417)
T ss_dssp THHHHHHHHHHHHHTESEEEE-ESSHHHHHHHHHHHHHT---TTTCEEEEETT--HHHHHHHHH----HTEEEEEEEEEE
T ss_pred cHHHHHHHHHHHhcCCCeEEE-EecCchHHHHHHHHHhc---CCCCEEEEcCCcHHHHHHHHHH----cCCeEEEecCCc
Confidence 468899999999999998655 67899999999999874 3899999999999999998753 3788887654
Q ss_pred ----------------hhhhc-c--CCCEeE---EEEEcCCCceeeccHHHHHHHHHhcCcEEEEEeccc-----cccCC
Q 001531 289 ----------------KDIDY-K--SGDVCG---VLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLL-----ALTIL 341 (1058)
Q Consensus 289 ----------------~~l~~-l--~~~t~~---V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~-----slg~l 341 (1058)
+++++ + .++.++ |++++|||+|.+.|+++|+++||++|.+++|+ ++| -..+.
T Consensus 138 ~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h~~~~~llvD-EAhGah~~F~~lp 216 (417)
T PF01276_consen 138 NEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICHKHGIPLLVD-EAHGAHFGFHPLP 216 (417)
T ss_dssp -TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHCCTECEEEEE--TT-TTGGCSGGG
T ss_pred cccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhcccCCEEEEE-ccccccccCCCCc
Confidence 23333 3 355555 99999999999999999999999999999993 232 11233
Q ss_pred CCCCcccce-------EEEecC-cccccccCCCCCceEEEEEehhh-hhcCCCcEEeeeecCCCCcceeeeccccccccc
Q 001531 342 KPPGELGAD-------IVVGSA-QRFGVPMGYGGPHAAFLATSQEY-KRMMPGRIVGVSIDSSGKPALRVAMQTREQHIR 412 (1058)
Q Consensus 342 ~~p~~~GaD-------ivvgs~-k~lg~P~~~GGP~~G~l~~~~~~-~~~lpgrivG~s~d~~g~~~~~l~lqtreq~ir 412 (1058)
.+.-.+||| +++.|. |.++.- . ++++|.++... ++. .|
T Consensus 217 ~~a~~~gad~~~~~~~~vvqS~HKtL~al-t----Qts~lh~~~~~~v~~----------------------------~~ 263 (417)
T PF01276_consen 217 RSALALGADRPNDPGIIVVQSTHKTLPAL-T----QTSMLHVKGDRIVDH----------------------------ER 263 (417)
T ss_dssp TTCSSTTSS-CTSBEEEEEEEHHHHSSS--T----T-EEEEEETCCCTTH----------------------------HH
T ss_pred cchhhccCccccccceeeeechhhccccc-c----cceEEEecCCCcccH----------------------------HH
Confidence 344679999 999999 777542 2 46889887653 110 00
Q ss_pred ccccCCCccchhHHHHHHHHHH--HHHh-CcccHHHHHHHHHHHHHHHHHHH---hcCCCeEEcCC------C-------
Q 001531 413 RDKATSNICTAQALLANMAAMY--AVYH-GPEGLKTIAQRVHGLAGTFALGL---KKLGTVEVQGL------P------- 473 (1058)
Q Consensus 413 RekaTsni~t~~~l~a~~Aa~y--l~~~-g~~Gl~~ia~~~~~~a~~l~~~L---~~~G~~~l~~~------~------- 473 (1058)
...+-+-.-|+++.+.++|++- ..++ +.+| +++.++..+++..++++| +++.+|+++++ .
T Consensus 264 ~~~~l~~~~TTSPSY~lmASlD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 342 (417)
T PF01276_consen 264 VNEALSMHQTTSPSYPLMASLDVARAQMEEEEG-RELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPG 342 (417)
T ss_dssp HHHHHHHHS-SS--HHHHHHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT
T ss_pred HHHHHHHHcCCChHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCcc
Confidence 0111112235678889999883 2355 4455 567788888999999999 55544777632 1
Q ss_pred --------------Ccc--EEEEecC-----------C--HHHHHHHHHHcCceeeeccCCeEEEEeccCCCHH
Q 001531 474 --------------FFD--TVKVKCA-----------D--AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLE 518 (1058)
Q Consensus 474 --------------~~~--~v~i~~~-----------~--~~~l~~~L~~~GI~~~~~~~~~lris~~~~~t~e 518 (1058)
.+| -++|.++ + +..+.+.|+++||.++..+...+++-++..+|++
T Consensus 343 ~~whgf~~~~~~~~~lDP~K~ti~~pG~~~~g~~~~~Gi~g~~~~~~L~~~~I~~Ek~d~~~vL~l~t~G~t~~ 416 (417)
T PF01276_consen 343 ENWHGFEGLADDYYMLDPTKLTINTPGIDADGELSELGIPGYIVEKYLREHGIQVEKTDLYNVLFLFTIGDTKE 416 (417)
T ss_dssp -TTT--TT--TTSEEE-TTEEEEE-STBETTSSB-SS---HHHHHHHHHHTTEE-SEEESSEEEEE--TTS-HH
T ss_pred ccchhchhcccCccccCCcEEEEEccCcCcCCcccccCCCHHHHHHHHHHcCCEEEeccCccEEEEecCCCCCC
Confidence 022 2555541 2 6789999999999999988889999999888875
No 140
>PLN02721 threonine aldolase
Probab=99.75 E-value=1.1e-16 Score=184.05 Aligned_cols=292 Identities=14% Similarity=0.136 Sum_probs=185.1
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHH---HHHhCCcEEEEEcCC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TAAMCGMKIVSVGTD 710 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa---~a~~~G~~vv~V~~d 710 (1058)
..++++.+++++|.+.. +..++|+++..+++.++. . .++++|++++..|..... .+...|++++.++.+
T Consensus 42 ~~~l~~~la~~~~~~~~-~~~~~Gs~a~~~~l~~~~----~---~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 113 (353)
T PLN02721 42 ALRLEEEMAKIFGKEAA-LFVPSGTMGNLISVLVHC----D---VRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNN 113 (353)
T ss_pred HHHHHHHHHHHhCCcee-EEecCccHHHHHHHHHHc----c---CCCCeEEEcCccceehhcccchhhhcCceeEecCCC
Confidence 45788999999998864 445567665543333221 1 146789999887743333 467789999999988
Q ss_pred CCCCCCHHHHHHHHHhcC----CCeEEEEEEcC-C-Cccccc--ccHHHHHHHHHHcCCEEEEeccCcccc---cCcCCC
Q 001531 711 AKGNINIEELRKAAEANR----DNLSTLMVTYP-S-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ---VGLTSP 779 (1058)
Q Consensus 711 ~~g~iD~e~L~~~i~~~~----~~taaV~vt~P-n-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~al---~gl~~p 779 (1058)
+++.+|+++++++++++. +++++|+++++ | ++|.+. +++++|+++|+++|+++++|+++.... .+. .+
T Consensus 114 ~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~-~~ 192 (353)
T PLN02721 114 EDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGV-PV 192 (353)
T ss_pred cCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCC-CH
Confidence 889999999999997421 47889999775 3 467764 248999999999999999999864211 111 22
Q ss_pred C--ccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHH
Q 001531 780 G--YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 857 (1058)
Q Consensus 780 g--~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~ 857 (1058)
. ..++|+++.++||+|+ ||.++++..++++...+.. . . ....+... ..+. .++.+.
T Consensus 193 ~~~~~~~d~~~~s~sK~l~------~~~G~~~~~~~~~~~~~~~-~-~----------~~~~~~~~--~~~~--~~~~~~ 250 (353)
T PLN02721 193 HRLVKAADSVSVCLSKGLG------APVGSVIVGSKSFIRKAKR-L-R----------KTLGGGMR--QVGV--LAAAAL 250 (353)
T ss_pred HHHhhhCCEEEEecccccC------CceeeEEecCHHHHHhHHH-H-H----------HhcCCCee--hhHH--HHHHHH
Confidence 2 2378999999999985 4433445556555443210 0 0 00000011 1111 111122
Q ss_pred HHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCe--eeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCcccc
Q 001531 858 TYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPI--LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 935 (1058)
Q Consensus 858 a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v--~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~ 935 (1058)
..+.. -+. ..++...+++++.+.|+++..+ ....+ ..+.+.++++. ..+.+..+++++|.++||.+.
T Consensus 251 ~~l~~----~~~-~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~~L~~~gi~v~ 319 (353)
T PLN02721 251 VALQE----NVP-KLEDDHKKAKLLAEGLNQIKGLRVNVAAV---ETNIVYFDITD---GSRITAEKLCKSLEEHGVLLM 319 (353)
T ss_pred HHHHH----HHH-HHHHHHHHHHHHHHHHHhCCCcEEecCCc---cceEEEEEccC---CccccHHHHHHHHHhCCcEEe
Confidence 22211 122 2233356778999999875222 12222 22334556541 012467899999999999976
Q ss_pred CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001531 936 TMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1058)
Q Consensus 936 ~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~ 970 (1058)
... .+.+|++++...+++|+++++++|++++.
T Consensus 320 ~~~---~~~lR~~~~~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 320 PGN---SSRIRVVTHHQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred cCC---CceEEEEecCcCCHHHHHHHHHHHHHHhh
Confidence 432 47899999888899999999999988754
No 141
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.75 E-value=7.1e-16 Score=178.22 Aligned_cols=331 Identities=19% Similarity=0.251 Sum_probs=220.5
Q ss_pred ccccccccccCCcccccccccccccccc--cCCCCchhhhhcHHHHHHHHHHHHHHHhCCC--ceeeecCchHHHHHHHH
Q 001531 590 SMIPLGSCTMKLNATTEMMPVTWPSFAN--IHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGL 665 (1058)
Q Consensus 590 ~~i~lGs~t~~~~~~~~~~~~~~~~f~~--~~P~~p~e~~qG~~~~~~el~~~lael~G~~--~~~l~~~sGa~ge~a~l 665 (1058)
+...+|++++++..+++.+... -..+. +.+| +...++.+.|.+++..+ ...++.++|+.++++++
T Consensus 66 ~v~~~GH~hP~Vv~Av~~q~~~-~~h~~~~~~~~----------e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~Ai 134 (447)
T COG0160 66 AVLNLGHNHPRVVEAVKRQLAK-LNHTHTRDLYY----------EPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAI 134 (447)
T ss_pred chhccCCCCHHHHHHHHHHHHH-hhcccCCcccc----------hhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHH
Confidence 3456889988888888877321 11111 2222 23457778888887653 33578889999999999
Q ss_pred HHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhC--------C-----cEEEEEcCCCCC------------CCCHHHH
Q 001531 666 MVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMC--------G-----MKIVSVGTDAKG------------NINIEEL 720 (1058)
Q Consensus 666 lair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~--------G-----~~vv~V~~d~~g------------~iD~e~L 720 (1058)
..+|.|. ++...|....++||....++.+. | -.|..+|..... .-..+.+
T Consensus 135 KiAr~~T-----gr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~ 209 (447)
T COG0160 135 KIARAYT-----GRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYI 209 (447)
T ss_pred HHHHHHh-----CCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHH
Confidence 9888873 23344446788999776654321 1 136777764321 1124445
Q ss_pred HHHHHhc---CCCeEEEEEEcC-CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc------C--Cc
Q 001531 721 RKAAEAN---RDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--AD 785 (1058)
Q Consensus 721 ~~~i~~~---~~~taaV~vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~------G--aD 785 (1058)
+..+... ..+++++++..- +..|++.+ -++++.++|++||+++|+|++ |.|+.+.|+| | +|
T Consensus 210 e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEV----QtG~GRTG~~fa~E~~gv~PD 285 (447)
T COG0160 210 ERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEV----QTGFGRTGKMFAFEHFGVEPD 285 (447)
T ss_pred HHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc----ccCCCccccchhhhhcCCCCC
Confidence 6655432 347888888764 56788763 489999999999999999999 6788888864 4 79
Q ss_pred EEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHch
Q 001531 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1058)
Q Consensus 786 i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1058)
|+++ .|.++ + |-.+|.+..++++....|+... + ++.|+++.++++.+.|..+-+
T Consensus 286 ivt~--aK~ig----~-G~Pl~avv~r~ei~~~~~g~~~----------------~---Tf~GNpva~Aaa~AvL~vie~ 339 (447)
T COG0160 286 IVTL--AKSLG----G-GLPLSAVVGRAEIMDWPPGGHG----------------G---TFGGNPVACAAALAVLDVIEE 339 (447)
T ss_pred EEEe--ccccc----C-CCceeEEeccHHhcccCCcccC----------------C---CCCcCHHHHHHHHHHHHHHHH
Confidence 9987 37663 4 5557788888888875454321 1 134677888888899998888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCcc-ceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCC
Q 001531 866 KGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTV-AHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW 939 (1058)
Q Consensus 866 eGl~~~a~~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~-~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~ 939 (1058)
++|.+. +....+||+++|.++ ++++ ..|. |.. .-|++-|-. -+.....-..+|.+++.++|+...+.+
T Consensus 340 e~L~~~---a~~~G~~l~~~L~~l~~~~~~IgdVRG~-Glm~giE~v~d~~-t~~p~~~~~~~i~~~~~~~Glil~~~G- 413 (447)
T COG0160 340 ENLLER---AAELGEYLRDRLEELQEKHPLIGDVRGL-GLMIGVELVKDRD-TKEPDAELAAKIVARAFERGLLLLTCG- 413 (447)
T ss_pred ccHHHH---HHHHHHHHHHHHHHHHhhcCceeccccc-ceEEEEEEecCCC-CCCCCHHHHHHHHHHHHHcCCEEeccC-
Confidence 776654 446778999999764 5433 1231 222 123332211 010011235689999999998765443
Q ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 940 PVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 940 p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
+..+.+||.|+...|++++|+++++|.+++.++
T Consensus 414 ~~~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 414 PHGNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred CCCcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 236899999999999999999999999988764
No 142
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.75 E-value=1.7e-16 Score=179.11 Aligned_cols=205 Identities=19% Similarity=0.277 Sum_probs=147.8
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHH--HHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQE--MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIR 669 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~--~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair 669 (1058)
+..|++++.-+...+.+ ..|-.++.++|... +.|+.. .+.+.++.+|++.|.|...+..++|++ ++..++++
T Consensus 47 ld~~at~p~~~~Vldam-~~~~~~~~~nPh~~---~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~AT--Es~Nlvl~ 120 (428)
T KOG1549|consen 47 LDNQATGPMDPRVLDAM-LPYLLEYLGNPHSR---SYGWKAEDAVEAAREQVAKLINADPSDIVFTSGAT--ESNNLVLK 120 (428)
T ss_pred EecCcCCCCCHHHHHHH-HHHHHHhhcCCCcc---ccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCch--HHHHHHHH
Confidence 34577655433333322 22222333445332 345444 388899999999999976555555553 25566666
Q ss_pred HHHHHcCCCCCCEEEEcCCCCCccHHHH---HhCCcEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-Ccccc
Q 001531 670 AYHKARGDHHRNVCIIPVSAHGTNPATA---AMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVY 745 (1058)
Q Consensus 670 ~y~~~~G~~~r~~Vlip~saHg~~pa~a---~~~G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i 745 (1058)
......+++..+.||+...+|++.-.++ +-.|++|+.+|++.+|.+|++.+++.|+ ++|++|.|..-| ..|+.
T Consensus 121 ~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~---~~T~lv~I~~Vnn~~gv~ 197 (428)
T KOG1549|consen 121 GVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIR---SKTRLVSIMHVNNEIGVL 197 (428)
T ss_pred HhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcC---CCceEEEEEecccCcccc
Confidence 6544334312227888888898876653 4579999999999889999999999998 899999888875 57999
Q ss_pred cccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEEeCCccccccCCCCCCCceeEEEEeC
Q 001531 746 EEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK 813 (1058)
Q Consensus 746 ~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~ 813 (1058)
. |++||+++|++.|++||+|+||..+... ....++++|+++.++|||| |-||+|++++++
T Consensus 198 ~-Pv~EI~~icr~~~v~v~~DaAQavG~i~-vDV~eln~D~~s~s~HK~y------gp~~iGaLYvr~ 257 (428)
T KOG1549|consen 198 Q-PVKEIVKICREEGVQVHVDAAQAVGKIP-VDVQELNADFLSISAHKIY------GPPGIGALYVRR 257 (428)
T ss_pred c-cHHHHHHHhCcCCcEEEeehhhhcCCcc-ccHHHcCchheeeeccccc------CCCcceEEEEcc
Confidence 9 7999999999999999999998643322 1235789999999999988 456899999996
No 143
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.75 E-value=2.6e-16 Score=185.25 Aligned_cols=282 Identities=13% Similarity=0.094 Sum_probs=179.4
Q ss_pred HHhhHHHHHHHHHHH----HHHHhcCCCCcceEe-ecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHH-HHHHHH-hh
Q 001531 204 EIAQGRLESLLNFQT----MIADLTGLPMSNASL-LDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQT-IDICIT-RA 276 (1058)
Q Consensus 204 e~sqG~l~~l~e~q~----~ia~L~G~~~anasl-~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~-~~~~~~-~a 276 (1058)
+...| .+.+.++|+ .+++++|.+. +.+ +.+||+|+.++++++ . ++||+|++++..|.+. ...++. ..
T Consensus 64 r~~~G-~~~~~~lE~~~~~~la~l~g~~~--alv~~~SG~~A~~~~l~al-~--~~GD~Vl~~~~~~~~~~~~g~~~~~~ 137 (416)
T PRK13034 64 RYYGG-CEFVDEVEALAIERAKQLFGCDY--ANVQPHSGSQANGAVYLAL-L--KPGDTILGMSLSHGGHLTHGAKVSLS 137 (416)
T ss_pred cccCC-ChHHHHHHHHHHHHHHHHhCCCc--eEEecCCcHHHHHHHHHHh-c--CCCCEEEEcCccceeeeecCCcceec
Confidence 34445 366777777 9999999886 434 479999999998887 3 3899999999999873 222211 00
Q ss_pred ------cCCCeEE--EEeCchhhhc-cC-CCEeEEEEEcCCCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCC--
Q 001531 277 ------DGFDIKV--VVSDLKDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP-- 344 (1058)
Q Consensus 277 ------~~~gi~v--~~v~~~~l~~-l~-~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p-- 344 (1058)
..++++. ..+|++++++ +. .++++|++..+ .+|...|+++|.++||++|++++|| +.+++|+....
T Consensus 138 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~-~~g~~~dl~~l~~la~~~g~~livD-~Aha~G~~~~g~~ 215 (416)
T PRK13034 138 GKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFS-AYPRELDFARFREIADEVGALLMVD-MAHIAGLVAAGEH 215 (416)
T ss_pred cceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCC-ccccccCHHHHHHHHHHcCCEEEEe-CcccccCcccCCC
Confidence 0111111 1156677776 53 35677766554 4688889999999999999999994 45666654321
Q ss_pred -Cc-ccceEEEecC-cccccccCCCCCceEEEEEehh-hhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCc
Q 001531 345 -GE-LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQE-YKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNI 420 (1058)
Q Consensus 345 -~~-~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~-~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni 420 (1058)
+. .++|++++++ |+|++| ..|+++++++ +..++... +. . .++ +.++
T Consensus 216 ~~~~~~~Di~~~s~~K~l~g~------~GG~v~~~~~~~~~~~~~~-~~-----------~-~~~----------~~~~- 265 (416)
T PRK13034 216 PNPFPHAHVVTTTTHKTLRGP------RGGMILTNDEEIAKKINSA-VF-----------P-GLQ----------GGPL- 265 (416)
T ss_pred CCCCCCceEEEEeCcccCCCC------CCeEEEECcHHHHHHHHhh-cC-----------C-ccc----------CCcc-
Confidence 11 2589999998 877543 3367766553 32222100 00 0 000 0011
Q ss_pred cchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC-CCccE--EEEecCC--HHHHHHHHHHc
Q 001531 421 CTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDT--VKVKCAD--AHAIASAAYKI 495 (1058)
Q Consensus 421 ~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~-~~~~~--v~i~~~~--~~~l~~~L~~~ 495 (1058)
.....+...++ ..+-..+..+..+++++++++|+++|.++| +++... ...+. +.+...+ ...+.++|.++
T Consensus 266 --~~~~aa~~~al--~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G-~~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~~ 340 (416)
T PRK13034 266 --MHVIAAKAVAF--GEALQPEFKTYAKQVIANAQALAEVLKERG-YDLVSGGTDNHLLLVDLRPKGLSGKDAEQALERA 340 (416)
T ss_pred --HHHHHHHHHHH--HHHhChhHHHHHHHHHHHHHHHHHHHHHcC-CEeccCCCCCcEEEEEcCCCCCCHHHHHHHHHhC
Confidence 01121221111 222123445678999999999999999997 988642 22223 4444444 56777899999
Q ss_pred Cceeeec----------cCCeEEEEecc----CCCHHHHHHHHHHHh
Q 001531 496 EMNLRVV----------DSNTVTASFDE----TTTLEDVDKLFIVFA 528 (1058)
Q Consensus 496 GI~~~~~----------~~~~lris~~~----~~t~edid~ll~al~ 528 (1058)
||.+... .+..+|+++++ .++++|+++++++|.
T Consensus 341 GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~ 387 (416)
T PRK13034 341 GITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWIL 387 (416)
T ss_pred CcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHH
Confidence 9988641 23579999999 666999999999996
No 144
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.75 E-value=4.5e-16 Score=179.52 Aligned_cols=270 Identities=12% Similarity=0.138 Sum_probs=174.6
Q ss_pred HHHHHHHHHHHHHHhCCCceeee-cCchHHHHHHHHHHHHHHHHHcCCCC-CCEEEEcCCCCCccHHH---HHhCCcEEE
Q 001531 631 QEMFNNLGEWLCTITGFDSFSLQ-PNAGAAGEYAGLMVIRAYHKARGDHH-RNVCIIPVSAHGTNPAT---AAMCGMKIV 705 (1058)
Q Consensus 631 ~~~~~el~~~lael~G~~~~~l~-~~sGa~ge~a~llair~y~~~~G~~~-r~~Vlip~saHg~~pa~---a~~~G~~vv 705 (1058)
.+.+.++++++++++|.+...+. .++++++...++.++.. .+..+ ++.|+++...|+++... ++..|++++
T Consensus 41 ~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~----~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~ 116 (353)
T TIGR03235 41 KKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLAR----AGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVT 116 (353)
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHH----hcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEE
Confidence 45678999999999999864433 44445454444433321 12112 36788888888776554 345799999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCC
Q 001531 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA 784 (1058)
Q Consensus 706 ~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~Ga 784 (1058)
.++.++++.+|+++|+++++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+...+ ...++++
T Consensus 117 ~v~~~~~~~~d~~~l~~~l~---~~~~lv~~~~~~n~tG~~~-~~~~I~~l~~~~~~~~ivD~a~~~g~~~~-~~~~~~~ 191 (353)
T TIGR03235 117 YLPVDESGRIDVDELADAIR---PDTLLVSIMHVNNETGSIQ-PIREIAEVLEAHEAFFHVDAAQVVGKITV-DLSADRI 191 (353)
T ss_pred EEccCCCCcCCHHHHHHhCC---CCCEEEEEEcccCCceecc-CHHHHHHHHHHcCCEEEEEchhhcCCccc-cccccCC
Confidence 99998889999999999996 688999999984 689998 79999999999999999999976433322 2235789
Q ss_pred cEEEeCCccccccCCCCCCCceeEEEEeCCCCCC--CCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHH
Q 001531 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPF--LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 862 (1058)
Q Consensus 785 Di~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~--lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~ 862 (1058)
|++++++||+++ .||+|+++++++.... +....++.. ..++.+.++.++.. ...+ .+.+..
T Consensus 192 D~~~~s~~K~~g------p~g~g~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~gt~~~~~-----~~al---~~al~~ 254 (353)
T TIGR03235 192 DLISCSGHKIYG------PKGIGALVIRKRGKPKAPLKPIMFGGG---QERGLRPGTLPVHL-----IVGM---GEAAEI 254 (353)
T ss_pred CEEEeehhhcCC------CCceEEEEEccCcccccccCceeeCCC---CcCccccCCCChHH-----HHHH---HHHHHH
Confidence 999999999762 2478999999875322 221111110 00111122233221 1111 222232
Q ss_pred HchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCcccc
Q 001531 863 MGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 935 (1058)
Q Consensus 863 lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~ 935 (1058)
+ .+|+.+..++...+++++.++|++. +++. ..+.......+.|.++ +.+.+++.++|.+ ||.+.
T Consensus 255 ~-~~~~~~~~~~~~~l~~~l~~~l~~~g~~~~-~~~~~~~~~i~~~~~~------~~~~~~v~~~L~~-~i~v~ 319 (353)
T TIGR03235 255 A-RRNAQAWEVKLRAMRNQLRDALQTLGVKLN-GDPAETIPHILNFSID------GVNSEALIVNLRA-DAAVS 319 (353)
T ss_pred H-HhhHHHHHHHHHHHHHHHHHHhccCCeEEe-CCcccccCCEEEEEeC------CcCHHHHHHHHhC-CeEEE
Confidence 2 2467777788888999999999873 3332 1111222222334333 5678899999965 76653
No 145
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.75 E-value=2.3e-16 Score=183.27 Aligned_cols=291 Identities=14% Similarity=0.161 Sum_probs=182.1
Q ss_pred hhhhcHHHHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEE
Q 001531 625 DQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1058)
Q Consensus 625 e~~qG~~~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~v 704 (1058)
....|..+...++++.+++++|.+.+ +..++|+.++.+. +..+ . ++++.|++....|++.-..+.......
T Consensus 49 ~~~~g~~~~~~~~e~~la~~~~~~~~-l~~~sG~~a~~~~---~~~~---~--~~~d~ii~d~~~H~sv~~~~~~~~~~~ 119 (370)
T PRK05937 49 RAILGPSSLLDDLEHKIAHFHGAPEA-FIVPSGYMANLGL---CAHL---S--SVTDYVLWDEQVHISVVYSLSVISGWH 119 (370)
T ss_pred CcccCChHHHHHHHHHHHHHhCCCeE-EEECChHHHHHHH---HHHh---C--CCCCEEEEEhhhhHHHHHHHHHcCCce
Confidence 34456777889999999999999765 6677887665322 2221 1 245677777888876655555443222
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcC---CCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCC
Q 001531 705 VSVGTDAKGNINIEELRKAAEANR---DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 780 (1058)
Q Consensus 705 v~V~~d~~g~iD~e~L~~~i~~~~---~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg 780 (1058)
+.+ +.+|+++|++++++.. +++.+|++++++ ..|.+. |+++|+++|+++|+++++|++|..+..+..--|
T Consensus 120 ~~~-----~~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~-pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g 193 (370)
T PRK05937 120 QSF-----RHNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLA-PLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKG 193 (370)
T ss_pred EEe-----cCCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCcc-CHHHHHHHHHHcCCEEEEECCccccccCCCCCc
Confidence 333 3479999999997532 356677788885 689998 799999999999999999999864432221101
Q ss_pred ---ccCC---cEEEeCCccccccCCCCCCCceeEEEEeCCCCC---CCCCCCcccCCCCCCCCCCCCCCCCCccchhhHH
Q 001531 781 ---YIGA---DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAP---FLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1058)
Q Consensus 781 ---~~Ga---Di~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~---~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~ 851 (1058)
.+|+ |+...+++|.| |++|+|+++.++.... ..+... . . ... ++.+
T Consensus 194 ~~~~~~~~~~~~~~~tlsK~~------g~~G~~vl~~~~~~~~~~~~~~~~~-----------~--s-~~~--~~~~--- 248 (370)
T PRK05937 194 FCHSLGYENFYAVLVTYSKAL------GSMGAALLSSSEVKQDLMLNSPPLR-----------Y--S-TGL--PPHL--- 248 (370)
T ss_pred hHHhhCCCCCcEEEEechhhh------hcCceEEEcCHHHHHHHHHhCCCCe-----------e--c-CCC--CHHH---
Confidence 2442 35567778877 3346676665431111 111100 0 0 111 1111
Q ss_pred HHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCC
Q 001531 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 931 (1058)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~G 931 (1058)
+++..+.+..+-.+| ....++...+.+++.+.|... ++ +. ...+. ++ +.+...+.+.|.++|
T Consensus 249 -~~a~~aal~~l~~~~-~~~~~~l~~l~~~l~~~l~~~------~~-~~-~~~i~--~~------~~~~~~~~~~L~~~g 310 (370)
T PRK05937 249 -LISIQVAYDFLSQEG-ELARKQLFRLKEYFAQKFSSA------AP-GC-VQPIF--LP------GISEQELYSKLVETG 310 (370)
T ss_pred -HHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHhcCCC------CC-CC-EEEEE--eC------ChhHHHHHHHHHHCC
Confidence 122223344443444 233445556677777766532 00 11 11122 22 235678999999999
Q ss_pred ccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001531 932 FHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1058)
Q Consensus 932 i~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~ 973 (1058)
|.++...+|..+.+||+++..+|++|||+|+++|+++++++.
T Consensus 311 i~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~ 352 (370)
T PRK05937 311 IRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQ 352 (370)
T ss_pred eeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 988765567667899999999999999999999999887654
No 146
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.74 E-value=2.3e-16 Score=178.08 Aligned_cols=286 Identities=19% Similarity=0.182 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCC----EEEEcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 001531 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKK----TFIIASNCHPQTIDICITRADGFDIKVVVS 286 (1058)
Q Consensus 211 ~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd----~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v 286 (1058)
.++.+.++.+|+|+|+++.++++++++|.++..++....+. .++ +||+...+||++...|+.+. ..|++++.+
T Consensus 85 ~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlvl~~v~~~--~~~~~~k~iitl~~eH~~v~~s~~~l~-~~g~~Vt~l 161 (428)
T KOG1549|consen 85 DAVEAAREQVAKLINADPSDIVFTSGATESNNLVLKGVARF--FGDKTKKHIITLQTEHPCVLDSCRALQ-EEGLEVTYL 161 (428)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHHHHHhhcc--ccccccceEEEecccCcchhHHHHHHH-hcCeEEEEe
Confidence 35888999999999999999999999996666555544332 233 89999999999999998865 468999998
Q ss_pred Cch--------hhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCC-CCCcccceEEEec
Q 001531 287 DLK--------DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGS 355 (1058)
Q Consensus 287 ~~~--------~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~-~p~~~GaDivvgs 355 (1058)
|++ +++. |+++|++|.+.+. |..|++.|++||+++|++.|+.+++|+ +++.|.++ +..++|+|+++.+
T Consensus 162 pv~~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~Da-AQavG~i~vDV~eln~D~~s~s 240 (428)
T KOG1549|consen 162 PVEDSGLVDISKLREAIRSKTRLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDA-AQAVGKIPVDVQELNADFLSIS 240 (428)
T ss_pred ccCccccccHHHHHHhcCCCceEEEEEecccCccccccHHHHHHHhCcCCcEEEeeh-hhhcCCccccHHHcCchheeee
Confidence 763 3455 8899999999875 789999999999999999999999954 45777653 5689999999999
Q ss_pred CcccccccCCCCCceEEEEEeh--hhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHH
Q 001531 356 AQRFGVPMGYGGPHAAFLATSQ--EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1058)
Q Consensus 356 ~k~lg~P~~~GGP~~G~l~~~~--~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~ 433 (1058)
+++| ||.|+.|+||||+ ...+..| .+.| |. |-|. .+.||-+...+- ++-+++
T Consensus 241 ~HK~-----ygp~~iGaLYvr~~~~~~~~~p-~~~G------Gg-------q~r~----~rsGT~~~~~~~---~~gsA~ 294 (428)
T KOG1549|consen 241 AHKI-----YGPPGIGALYVRRKRPRLRVEP-PLSG------GG-------QERG----LRSGTVATPLAV---GLGSAA 294 (428)
T ss_pred cccc-----cCCCcceEEEEccCCCcccccC-cccC------Cc-------cccc----cccCCcCchhhh---hhHHHH
Confidence 9555 3446799999996 2333333 3333 11 1111 234666663323 334444
Q ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHHHhc-CCCeEEcCC-C--CccEEEEecC---C---HHHHHHHHHHcCce-----
Q 001531 434 YAVYHGPEGLKTIAQRVHGLAGTFALGLKK-LGTVEVQGL-P--FFDTVKVKCA---D---AHAIASAAYKIEMN----- 498 (1058)
Q Consensus 434 yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~-~G~~~l~~~-~--~~~~v~i~~~---~---~~~l~~~L~~~GI~----- 498 (1058)
-..--...+.+.+.++ +...+..++.. +..+.+.+. + .-..+.|.++ + ..+..+....-|..
T Consensus 295 e~~~~~~~~~~~~~~~---~~~~ll~~i~~~~~~~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~ 371 (428)
T KOG1549|consen 295 EFVNKEMAYDEAIIKR---LSEKLLMGIGQSLPEVTLNGSGKSRYPGLVSLSFPYVEGESLLMDLKDVALSSGSACTSAS 371 (428)
T ss_pred HHHHhhcchhHHHHHH---HHHHHHHHHhhhCchhhccCCcccccccceeeecccccCcchhhhhhhhhhcccchhhcCC
Confidence 2222222233444333 44555555533 221233322 1 1123444444 1 11111111111111
Q ss_pred eee------------ccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 499 LRV------------VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 499 ~~~------------~~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
+.+ .....+|||+.-+|+++|++.+++.+..
T Consensus 372 ~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di~~~~~~i~~ 414 (428)
T KOG1549|consen 372 LEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDIDYLVDAIKK 414 (428)
T ss_pred CCcchhhhhcCcchhhhcceeEEeeeeeCcHHHHHHHHHHHHH
Confidence 000 0136799999999999999999999864
No 147
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.74 E-value=5e-16 Score=182.06 Aligned_cols=314 Identities=18% Similarity=0.246 Sum_probs=199.8
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY 671 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y 671 (1058)
..+|++.+++..++..+. ....+.. ..+. .+...++.+.|+++++.+.+ +..++|++++++++.++|.|
T Consensus 52 ~~lGh~~p~v~~ai~~~~-~~~~~~~-~~~~--------~~~~~~l~~~l~~~~~~~~~-~~~~SGseA~e~Alk~a~~~ 120 (396)
T PRK04073 52 VNQGHRHPKIIQALKDQA-DKVTLTS-RAFH--------SDQLGPWYEKVAKLTGKDMV-LPMNTGAEAVETAIKAARRW 120 (396)
T ss_pred ccCCCCCHHHHHHHHHHH-hhccccc-cccC--------CHHHHHHHHHHHhcCCCCeE-EEcCChHHHHHHHHHHHHHH
Confidence 357778777665555542 2111111 0111 12244788899999887644 66789999998888888877
Q ss_pred HHH-cCC-CCCCEEE-EcCCCCCccHHHHHhCCc------------EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEE
Q 001531 672 HKA-RGD-HHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMV 736 (1058)
Q Consensus 672 ~~~-~G~-~~r~~Vl-ip~saHg~~pa~a~~~G~------------~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~v 736 (1058)
+.. +|. .++++|+ ...+.||.........+- .++.++. .|+++++++++ +++++|++
T Consensus 121 ~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~---~~~~~vii 192 (396)
T PRK04073 121 AYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-----GDLEALKAAIT---PNTAAFLV 192 (396)
T ss_pred hhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-----CCHHHHHHhcc---cCeEEEEE
Confidence 432 232 1345555 457889987655443321 1233443 28899999986 78999999
Q ss_pred EcC-CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCc--------cCCcEEEeCCccccccCCCCCCC
Q 001531 737 TYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGP 804 (1058)
Q Consensus 737 t~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~--------~GaDi~~~s~hKtf~~P~g~GGP 804 (1058)
+.| |..|.+.+ .+++|.++|+++|+++++|+++. ++.+.|. ..+|++++ .|.+ ++||.
T Consensus 193 ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~----g~g~~g~~~~~~~~~~~pdi~~~--sK~l----g~gg~ 262 (396)
T PRK04073 193 EPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQT----GLGRTGKLFACDWDNVTPDMYIL--GKAL----GGGVF 262 (396)
T ss_pred cCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh----CCCcCcHHHHhhhcCCCCCEEEe--cccc----cCCCC
Confidence 888 57888753 28999999999999999999864 3333321 24677765 4765 45667
Q ss_pred ceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHH
Q 001531 805 GMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAK 884 (1058)
Q Consensus 805 g~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~ 884 (1058)
.+|++.+++++.+.+.... .....+ ++...++++.+.|..+-++++.+ +..++.++|.+
T Consensus 263 ~ig~~~~~~~i~~~~~~~~--------------~~~t~~----~~~~~~aaa~aaL~~~~~~~l~~---~~~~~~~~l~~ 321 (396)
T PRK04073 263 PISCVAANRDILGVFTPGS--------------HGSTFG----GNPLACAVSIAALEVLEEEKLPE---RSLELGEYFKE 321 (396)
T ss_pred cceEEEEcHHHHhhhcCCC--------------CCCCCC----CCHHHHHHHHHHHHHHHhcCHHH---HHHHHHHHHHH
Confidence 7999999987766542110 001111 23344445556666654555543 34456888999
Q ss_pred HHhcc-CCee--eccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHH
Q 001531 885 RLEKH-YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRY 961 (1058)
Q Consensus 885 ~L~~~-~~v~--~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~f 961 (1058)
.|+++ +..+ .++ .+.+ +.+++. .+..++.++|.++|+.+.... ++.+||+|+...|++|||++
T Consensus 322 ~L~~l~~~~i~~~~~-~g~~---~~~~~~-------~~~~~~~~~l~~~Gv~~~~~~---~~~iRi~p~l~~t~e~i~~~ 387 (396)
T PRK04073 322 QLKEIDNPMIKEVRG-RGLF---IGVELN-------EPARPYCEALKEEGLLCKETH---ETVIRFAPPLVITKEELDWA 387 (396)
T ss_pred HHHhhcCCcccceec-ceEE---EEEEec-------chHHHHHHHHHHCCeEEecCC---CCEEEEECCcccCHHHHHHH
Confidence 98874 2211 112 1221 334432 246789999999999874321 47899999999999999999
Q ss_pred HHHHHHHH
Q 001531 962 CDALISIR 969 (1058)
Q Consensus 962 i~aL~~i~ 969 (1058)
+++|++++
T Consensus 388 ~~~l~~~l 395 (396)
T PRK04073 388 FEKIKAVL 395 (396)
T ss_pred HHHHHHHh
Confidence 99998764
No 148
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.74 E-value=8.4e-16 Score=180.18 Aligned_cols=287 Identities=18% Similarity=0.220 Sum_probs=190.4
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCCc----------
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM---------- 702 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G~---------- 702 (1058)
..++.+.|+++++.+. .+..+||++++++++.++|.|...++..+|++|+ ...++||.........|.
T Consensus 79 ~~~la~~L~~~~~~~~-~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~ 157 (397)
T TIGR03246 79 VLRLAKKLVDATFADK-VFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPL 157 (397)
T ss_pred HHHHHHHHHhhCCCCE-EEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCC
Confidence 4588899999987764 4678899999999999999886544322455555 466889987665444332
Q ss_pred --EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc---ccHHHHHHHHHHcCCEEEEeccCcccccCc
Q 001531 703 --KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGL 776 (1058)
Q Consensus 703 --~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~gl 776 (1058)
.+..++. .|+++++++++ +++++|+++.++ +.|++. ..+++|+++|++||+++++|+++ .|+
T Consensus 158 ~~~~~~~~~-----~d~~~l~~~l~---~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~----tG~ 225 (397)
T TIGR03246 158 PGGIKHAPY-----NDLAAAKALIS---DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQ----TGV 225 (397)
T ss_pred CCceEEeCC-----CCHHHHHHHhc---cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh----hcC
Confidence 2334443 48999999996 789999998654 456552 36999999999999999999986 233
Q ss_pred CCCCcc--------CCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchh
Q 001531 777 TSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 848 (1058)
Q Consensus 777 ~~pg~~--------GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g 848 (1058)
.+.|.+ .+|++++ .|.+ + ||..+|++++++++.+.+.... .+.+ +.+
T Consensus 226 Gr~G~~~a~~~~gv~pDi~t~--~K~l----g-gG~pigav~~~~~i~~~~~~~~---------------~~~t---~~~ 280 (397)
T TIGR03246 226 GRTGELYAYMHYGVTPDILTS--AKAL----G-GGFPIGAMLTTTEIAAHLKVGT---------------HGTT---YGG 280 (397)
T ss_pred CccccchhhhhcCCCCCEEEe--ehhh----h-CCcceeEEEEcHHHHHhccCCC---------------cCCC---CCC
Confidence 333322 3577654 4665 3 4566888988888766542110 0011 123
Q ss_pred hHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCccceEEEEecccccccCCCCHHHH
Q 001531 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDV 923 (1058)
Q Consensus 849 ~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v 923 (1058)
++..++++.+.+..+..+.+ .++..++.++|.++|+++ +.+. ..| .+.. +.+.+.+ ........+
T Consensus 281 ~p~~~aaa~a~l~~~~~~~l---~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg-~G~~---~~i~~~~---~~~~~~~~~ 350 (397)
T TIGR03246 281 NPLACAVAGKVLDLVNTPEL---LAGVKQRHDLFVDGLEKINARYNVFSEIRG-KGLL---IGAVLTE---AYQGKAKQF 350 (397)
T ss_pred CHHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHHHHHHHHhcCCCeEeeec-CceE---EEEEEcC---chhhHHHHH
Confidence 44455566666766654443 344556788899988774 2322 122 1211 1222210 001245789
Q ss_pred HHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 924 AKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 924 ~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
.+.|.++|+.+.... ++.+|++|+..+|++|||+++++|.+++.+
T Consensus 351 ~~~l~~~Gv~~~~~g---~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~ 395 (397)
T TIGR03246 351 VNAAAEEGVIALIAG---PNVVRFAPSLVISDDDIDEGLARFERAIEQ 395 (397)
T ss_pred HHHHHHCCeEEeecC---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999875332 378999999999999999999999988765
No 149
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.74 E-value=1.9e-16 Score=181.67 Aligned_cols=263 Identities=15% Similarity=0.129 Sum_probs=185.5
Q ss_pred hhHHHHHHHHHHHHHHHhcCCC--CcceEeecchHHHHHHHHHHhccc-----------cCCCCEEEEcCCCCHHHHHHH
Q 001531 206 AQGRLESLLNFQTMIADLTGLP--MSNASLLDEGTAAAEAMAMCNNIQ-----------KGKKKTFIIASNCHPQTIDIC 272 (1058)
Q Consensus 206 sqG~l~~l~e~q~~ia~L~G~~--~anasl~~~~Taa~ea~~~a~~~~-----------~~~gd~Vlv~~~~Hps~~~~~ 272 (1058)
+.+..+...++.+++++++|.+ ..++.++.|||.+...++.+.+.. .+.+.+|+++...|+++...+
T Consensus 33 ~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~ 112 (345)
T cd06450 33 SPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAA 112 (345)
T ss_pred CchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHH
Confidence 4555666677788999999986 346778899998777666554311 012348899999999988876
Q ss_pred HHhhcCCCeEEEEeCc--------hhhhc-cCC------CEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccc
Q 001531 273 ITRADGFDIKVVVSDL--------KDIDY-KSG------DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLL 336 (1058)
Q Consensus 273 ~~~a~~~gi~v~~v~~--------~~l~~-l~~------~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~ 336 (1058)
+. .|++++.++. ++|++ +++ ++++|++++| |.+|.+.|+++|+++||++|+++++|+ .+
T Consensus 113 ~~----~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~-a~ 187 (345)
T cd06450 113 AY----LDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDA-AY 187 (345)
T ss_pred HH----HhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEec-hh
Confidence 53 2666666543 44555 554 6788888887 579999999999999999999999943 34
Q ss_pred cccCCC-CC------CcccceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeeccccc
Q 001531 337 ALTILK-PP------GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTRE 408 (1058)
Q Consensus 337 slg~l~-~p------~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtre 408 (1058)
+.+.+. .. ...++|++++++ |+++.|+ +.|+++++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~-----g~g~~~~~-------------------------------- 230 (345)
T cd06450 188 GGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPL-----GCSAVLVR-------------------------------- 230 (345)
T ss_pred hHHHhhChhhHHHhcCccccCEEEEchhHhhCCCc-----chHHHHHH--------------------------------
Confidence 444331 11 113799999888 7666553 33444322
Q ss_pred ccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecC-----
Q 001531 409 QHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA----- 483 (1058)
Q Consensus 409 q~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~----- 483 (1058)
..++.++ +.+++.+|++++.++..++++++.+.|+++++++++.++..+.+.|..+
T Consensus 231 -----------------~~~~~~~--l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~~~~~~ 291 (345)
T cd06450 231 -----------------ALKLWAT--LRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKPSVKL 291 (345)
T ss_pred -----------------HHHHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEECCcchh
Confidence 1122222 3677889999999999999999999999985588875444445555543
Q ss_pred C--HHHHHHHHHHcCce-eeec---cCCeEEEEeccC-CCHHHHHHHHHHHhC
Q 001531 484 D--AHAIASAAYKIEMN-LRVV---DSNTVTASFDET-TTLEDVDKLFIVFAG 529 (1058)
Q Consensus 484 ~--~~~l~~~L~~~GI~-~~~~---~~~~lris~~~~-~t~edid~ll~al~~ 529 (1058)
+ ..++.++|.++|+. +... .++.+|++++.+ +|++|+++++++|..
T Consensus 292 ~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 292 DELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred hHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 2 56899999998654 4322 246899999986 599999999999853
No 150
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.74 E-value=3.5e-16 Score=184.26 Aligned_cols=291 Identities=18% Similarity=0.209 Sum_probs=186.2
Q ss_pred HHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCC
Q 001531 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1058)
Q Consensus 633 ~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~ 712 (1058)
...++++.+++++|.+. .+..++|++++.+++.++. + ..+++.|+++...|++....+.+.|.+++.++.
T Consensus 92 ~~~~Le~~la~~~g~~~-~i~~~sG~~a~~~~i~~l~-----~-~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~--- 161 (410)
T PRK13392 92 PHVLLERELADLHGKES-ALLFTSGYVSNDAALSTLG-----K-LLPGCVILSDALNHASMIEGIRRSGAEKQVFRH--- 161 (410)
T ss_pred HHHHHHHHHHHHhCCCC-EEEECcHHHHHHHHHHHHh-----c-CCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeC---
Confidence 35589999999999764 4666778776644443221 1 013467777777787776667788999877764
Q ss_pred CCCCHHHHHHHHHhcC-CCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcC------CCC-ccC
Q 001531 713 GNINIEELRKAAEANR-DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT------SPG-YIG 783 (1058)
Q Consensus 713 g~iD~e~L~~~i~~~~-~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~------~pg-~~G 783 (1058)
.|.+++++.+++.. +++++|++++|+ .+|.+. |+++|.++|+++|+++++|+++..+..+-. .++ ...
T Consensus 162 --~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~-~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~ 238 (410)
T PRK13392 162 --NDLADLEEQLASVDPDRPKLIAFESVYSMDGDIA-PIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDR 238 (410)
T ss_pred --CCHHHHHHHHHhccCCCCEEEEEeCCCCCCcccc-cHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCC
Confidence 36777777776432 578999999995 689887 799999999999999999999863331110 011 114
Q ss_pred CcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHH
Q 001531 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 863 (1058)
Q Consensus 784 aDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~l 863 (1058)
.|+++.+++|+|+. +| |++++++++.+.+.... . .. ..+++ .++..++++.+.+..+
T Consensus 239 ~div~~tlsK~~g~------~G-G~~~~~~~~~~~l~~~~-----------~--~~-~~s~~--~~~~~~~a~~aaL~~~ 295 (410)
T PRK13392 239 IDMIQGTLAKAFGC------LG-GYIAASADLIDFVRSFA-----------P--GF-IFTTA--LPPAVAAGATAAIRHL 295 (410)
T ss_pred CcEEEEEChHhhhc------cc-chhhcCHHHHHHHHHhC-----------c--ch-hccCc--CCHHHHHHHHHHHHHH
Confidence 68888899999853 33 67777766554321000 0 00 01110 1112223333444444
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHH-HCCccccCCCCC-
Q 001531 864 GSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHGPTMSWP- 940 (1058)
Q Consensus 864 G~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~-~~Gi~~~~~~~p- 940 (1058)
...+ +..++...+++++.+.|++. +++. ++ .+.+ +.+.+. .+.+..++.++|. ++||.+....+|
T Consensus 296 ~~~~--~~~~~~~~~~~~l~~~L~~~g~~~~-~~-~~~~---~~i~~~-----~~~~~~~~~~~L~~~~GI~v~~~~~p~ 363 (410)
T PRK13392 296 KTSQ--TERDAHQDRVAALKAKLNANGIPVM-PS-PSHI---VPVMVG-----DPTLCKAISDRLMSEHGIYIQPINYPT 363 (410)
T ss_pred hcCH--HHHHHHHHHHHHHHHHHHHcCCCCC-CC-CCCE---EEEEeC-----CHHHHHHHHHHHHHhCCEEEeeeCCCC
Confidence 3322 23355667889999999874 4442 11 2222 223322 0123568999997 689998655444
Q ss_pred C---CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 941 V---PGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 941 ~---~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
+ ...+||+++..+|++|+|+++++|.++.++
T Consensus 364 ~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~ 397 (410)
T PRK13392 364 VPRGTERLRITPTPLHDDEDIDALVAALVAIWDR 397 (410)
T ss_pred CCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 2 258999999999999999999999988544
No 151
>PRK15029 arginine decarboxylase; Provisional
Probab=99.73 E-value=1.9e-16 Score=194.20 Aligned_cols=277 Identities=13% Similarity=0.070 Sum_probs=195.8
Q ss_pred HHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--
Q 001531 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 288 (1058)
Q Consensus 211 ~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~-- 288 (1058)
..|.|.|+..|+++|++.+.+ +++|+|.++.+++++.. ++||+|||++++|.|+...+.. .|++.+++++
T Consensus 205 G~I~eAq~~aA~~fgA~~t~F-lvNGST~gn~a~i~a~~---~~gd~Vlv~RN~HKSv~~al~L----~ga~Pvyl~P~~ 276 (755)
T PRK15029 205 GAFGESEKYAARVFGADRSWS-VVVGTSGSNRTIMQACM---TDNDVVVVDRNCHKSIEQGLIL----TGAKPVYMVPSR 276 (755)
T ss_pred cHHHHHHHHHHHHhCCCcEEE-EeCChhHHHHHHHHHhc---CCCCEEEeecccHHHHHHHHHH----cCCeEEEecccc
Confidence 478899999999999997655 77899999999998874 3899999999999999998743 4788887643
Q ss_pred ----------------hhhhc-c--CCCEe--------EEEEEcCCCceeeccHHHHHHHHHhcCcEEEEEeccc-c---
Q 001531 289 ----------------KDIDY-K--SGDVC--------GVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLL-A--- 337 (1058)
Q Consensus 289 ----------------~~l~~-l--~~~t~--------~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~-s--- 337 (1058)
+.+++ + .++++ +|++++|||+|.+.|+++|+++||++|++++|+ ++| +
T Consensus 277 ~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~Gv~~di~~I~~~~h~~~~~llvD-EAhGah~~ 355 (755)
T PRK15029 277 NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFD-EAWYGYAR 355 (755)
T ss_pred cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCcceeeCHHHHHHHHHhcCCeEEEE-Cccccccc
Confidence 23433 3 34455 899999999999999999999999999999993 232 1
Q ss_pred -ccCCC--CCC-----c-ccce-EEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeeccc
Q 001531 338 -LTILK--PPG-----E-LGAD-IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQT 406 (1058)
Q Consensus 338 -lg~l~--~p~-----~-~GaD-ivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqt 406 (1058)
...++ .+- . .||| +++.|. |.|+. ++ ++++|+++.. .+++.
T Consensus 356 F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~a-lT----QaS~LHv~~~-~~~id---------------------- 407 (755)
T PRK15029 356 FNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNA-LS----QASYIHVREG-RGAIN---------------------- 407 (755)
T ss_pred cCccccccccccccccccCCCceEEEEchhhcccc-hh----hhhhheeCCC-ccccC----------------------
Confidence 11121 111 3 7999 889999 77754 23 3467777543 11111
Q ss_pred ccccccccccCCCccchhHHHHHHHHHH-H-HHhCc-ccHHHHHHHHHHHHHHHHHHHhcCCC-----------------
Q 001531 407 REQHIRRDKATSNICTAQALLANMAAMY-A-VYHGP-EGLKTIAQRVHGLAGTFALGLKKLGT----------------- 466 (1058)
Q Consensus 407 req~irRekaTsni~t~~~l~a~~Aa~y-l-~~~g~-~Gl~~ia~~~~~~a~~l~~~L~~~G~----------------- 466 (1058)
+.|...+-+-..|+++.|.++|++- + .++.. .| +++.++..+.+..+++.|.++.+
T Consensus 408 ---~~r~~~~l~~~qSTSPSY~LmASLD~ar~~m~~~~G-~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~ 483 (755)
T PRK15029 408 ---FSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSG-LSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEV 483 (755)
T ss_pred ---HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhccccccccccccccccCccc
Confidence 0011112223346688999999983 2 23332 34 44667778888899999977643
Q ss_pred -------------------------eEEcCC--C------------CccE--EEEecCC----HH---------HHHHHH
Q 001531 467 -------------------------VEVQGL--P------------FFDT--VKVKCAD----AH---------AIASAA 492 (1058)
Q Consensus 467 -------------------------~~l~~~--~------------~~~~--v~i~~~~----~~---------~l~~~L 492 (1058)
+.++.+ . .+|+ ++|.+++ .. ++.+.|
T Consensus 484 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L 563 (755)
T PRK15029 484 VTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWL 563 (755)
T ss_pred cccccccccccccccchhhhccccceeeecccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHH
Confidence 222211 0 1243 4555432 33 899999
Q ss_pred HHcCceeeeccCCeEEEEeccCCCHHHHHHHHHHHh
Q 001531 493 YKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 493 ~~~GI~~~~~~~~~lris~~~~~t~edid~ll~al~ 528 (1058)
.++||.++..+...+.+.++..+|++++++|+++|.
T Consensus 564 ~~~gI~~E~~~~~~vL~l~s~g~t~~~~~~L~~aL~ 599 (755)
T PRK15029 564 GRHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLC 599 (755)
T ss_pred HHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 889999999888999999999999999999999986
No 152
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.73 E-value=1.7e-15 Score=175.40 Aligned_cols=279 Identities=17% Similarity=0.146 Sum_probs=186.5
Q ss_pred HHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--
Q 001531 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 288 (1058)
Q Consensus 211 ~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~-- 288 (1058)
..+.++++.+|+++|++ ++.++.|+|.++.+++.++. ++||+|+++...|.+....+ +..|++++.++.
T Consensus 44 ~~~~~l~~~la~~~g~~--~i~~~~g~t~al~~~l~~~~---~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~v~~~~ 114 (361)
T cd06452 44 PPIKDFHHDLAEFLGMD--EARVTPGAREGKFAVMHSLC---EKGDWVVVDGLAHYTSYVAA----ERAGLNVREVPNTG 114 (361)
T ss_pred chHHHHHHHHHHHcCCc--eEEEeCCHHHHHHHHHHHhc---CCCCEEEEcCCcchHHHHHH----HhcCCEEEEEecCC
Confidence 35778889999999994 58888999988887777662 37999999999998887654 346888887654
Q ss_pred --------hhhhc-cC-------CCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCC-CCCcccce
Q 001531 289 --------KDIDY-KS-------GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGAD 350 (1058)
Q Consensus 289 --------~~l~~-l~-------~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~-~p~~~GaD 350 (1058)
+++++ ++ +++++|++++| |.+|.+.|+++|+++||++|++++|| +.++.|.+. +..++|+|
T Consensus 115 ~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD-~a~~~g~~~~~~~~~~~d 193 (361)
T cd06452 115 HPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLN-GAYTVGRMPVSGKELGAD 193 (361)
T ss_pred CCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEE-CCcccCCcCCCHHHcCCC
Confidence 23433 43 37889999998 46999999999999999999999994 355666543 34578999
Q ss_pred EEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHH
Q 001531 351 IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLAN 429 (1058)
Q Consensus 351 ivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~ 429 (1058)
++++|+ |.|+.| +++|++++++++.+++-.. ...|.+.. .....+|++. .+..++
T Consensus 194 ~~~~s~~K~l~~~-----~~~G~l~~~~~~~~~l~~~----------~~~~~~~~------~~~~~~~~~~---~~~~~~ 249 (361)
T cd06452 194 FIVGSGHKSMAAS-----APIGVLATTEEWADIVFRT----------SQMFKIKE------VELLGCTLRG---APLVTL 249 (361)
T ss_pred EEEecCCccccCC-----CCeEEEEECHHHHHHHhcc----------ccccccce------eeeeccccCc---hHHHHH
Confidence 999998 777633 3578999998887765210 00011100 0001123222 233344
Q ss_pred HHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEecCC-----------HHHHHHHHHHcC
Q 001531 430 MAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCAD-----------AHAIASAAYKIE 496 (1058)
Q Consensus 430 ~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~--~~~~~v~i~~~~-----------~~~l~~~L~~~G 496 (1058)
++++ .+. .+-++. ..+..+++++++++|+++.|++++.. ...+.+.+..+. +.++.+.|.++|
T Consensus 250 ~~al--~~~-~~~~~~-~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g 325 (361)
T cd06452 250 MASF--PHV-KERVKR-WDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFLYSELKKRG 325 (361)
T ss_pred HHHH--HHH-HHHHHH-HHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchhhhhccccchhHHHHHHHcC
Confidence 4444 111 122333 33445677999999999933998731 111223333321 346999999999
Q ss_pred ceeeecc-CCeEEEEeccCCCHHHHHHHHHHHh
Q 001531 497 MNLRVVD-SNTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 497 I~~~~~~-~~~lris~~~~~t~edid~ll~al~ 528 (1058)
|.+.... ...+|++. ..++++|++.++++|+
T Consensus 326 I~~~~~~~~~~~ri~~-~g~~~e~~~~l~~al~ 357 (361)
T cd06452 326 IHGIKPGLTRYFKLST-YGLTWEQVEYVVDAFK 357 (361)
T ss_pred ceEEcCCCceEEEEEe-cCCCHHHHHHHHHHHH
Confidence 9863322 34678877 3479999999999986
No 153
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.73 E-value=3.9e-16 Score=183.68 Aligned_cols=293 Identities=17% Similarity=0.182 Sum_probs=185.9
Q ss_pred HHHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCC
Q 001531 631 QEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD 710 (1058)
Q Consensus 631 ~~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d 710 (1058)
.+...++++.+++++|.+. .+..++|++++.+++.++..+ .+++.|+.....|++....+...|.++..++.
T Consensus 90 ~~~~~~l~~~la~~~g~~~-~~~~~sG~~an~~ai~~l~~~------~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~- 161 (407)
T PRK09064 90 NHYHVELERELADLHGKEA-ALVFTSGYVSNDATLSTLAKL------IPDCVIFSDELNHASMIEGIRRSRCEKHIFRH- 161 (407)
T ss_pred HHHHHHHHHHHHHHhCCCc-EEEECcHHHHHHHHHHHHhCC------CCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-
Confidence 4456789999999999654 466677877664444443211 13444444444465554456667888766664
Q ss_pred CCCCCCHHHHHHHHHhcC-CCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccc-cCcC-----CCCc-
Q 001531 711 AKGNINIEELRKAAEANR-DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ-VGLT-----SPGY- 781 (1058)
Q Consensus 711 ~~g~iD~e~L~~~i~~~~-~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al-~gl~-----~pg~- 781 (1058)
.|+++|++++++.. +++++|++++|+ ..|.+. ++++|.++|+++|+++++|++|..+. +... ..+.
T Consensus 162 ----~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~-~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~ 236 (407)
T PRK09064 162 ----NDVAHLEELLAAADPDRPKLIAFESVYSMDGDIA-PIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLM 236 (407)
T ss_pred ----CCHHHHHHHHHhccCCCCeEEEEeCCCCCCcccc-CHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCC
Confidence 48899999987543 578899999984 679887 79999999999999999999986332 1100 0111
Q ss_pred cCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHH
Q 001531 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 861 (1058)
Q Consensus 782 ~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~ 861 (1058)
...|+++.+++|.|+. +| |++++++++.+.+.... . .. ..+++ .+...++++.+.+.
T Consensus 237 ~~~div~~t~sKa~g~------~G-G~~~~~~~~~~~l~~~~-----------~--~~-~~t~~--~~~~~~~aa~~al~ 293 (407)
T PRK09064 237 DRIDIIEGTLAKAFGV------MG-GYIAGSAALVDAVRSYA-----------P--GF-IFTTS--LPPAIAAAALASIR 293 (407)
T ss_pred CCCeEEEEecchhhhc------cC-ceEecCHHHHHHHHHhC-----------c--cc-cccCc--CCHHHHHHHHHHHH
Confidence 1458988899999853 22 78887766554431100 0 00 00100 11222333444455
Q ss_pred HHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHH-CCccccCCCC
Q 001531 862 MMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD-YGFHGPTMSW 939 (1058)
Q Consensus 862 ~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~-~Gi~~~~~~~ 939 (1058)
.+...+ ...++...+++++.++|++. +++. ++.+++ +.+.+.. .....++.++|.+ +||.+....+
T Consensus 294 ~~~~~~--~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~i---v~i~~~~-----~~~~~~l~~~L~~~~gi~v~~~~~ 361 (407)
T PRK09064 294 HLKESN--EERERHQERAAKLKAALDAAGIPVM--PNESHI---VPVMVGD-----PEKCKKASDMLLEEHGIYVQPINY 361 (407)
T ss_pred HHhcCH--HHHHHHHHHHHHHHHHHHHcCCCCC--CCCCCE---EEEEeCC-----HHHHHHHHHHHHHhCCEEEeeECC
Confidence 554332 23455667889999999874 5442 112222 2233321 1246789999875 6999866555
Q ss_pred C-CC---CEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 940 P-VP---GTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 940 p-~~---~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
| ++ +.+||+++..+|++|+|+++++|++++.+
T Consensus 362 p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~ 397 (407)
T PRK09064 362 PTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWAR 397 (407)
T ss_pred CCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 4 22 57999999999999999999999998754
No 154
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.73 E-value=5.1e-16 Score=182.63 Aligned_cols=293 Identities=16% Similarity=0.197 Sum_probs=188.3
Q ss_pred HHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCC
Q 001531 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA 711 (1058)
Q Consensus 632 ~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~ 711 (1058)
+...++++.+++++|.+.+ +..++|++++.+++.++. +. .+++.|++....|++....+...|.+++.++.
T Consensus 90 ~~~~~le~~la~~~g~~~~-~~~~SG~~An~~ai~~l~-----~~-~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-- 160 (406)
T PRK13393 90 HYHVLLEAELADLHGKEAA-LLFTSGYVSNWAALSTLG-----SR-LPGCVILSDELNHASMIEGIRHSRAEKRIFRH-- 160 (406)
T ss_pred HHHHHHHHHHHHHhCCCcE-EEeCCcHHHHHHHHHHhh-----cC-CCCCEEEEccchhHHHHHHHHHcCCeEEEeCC--
Confidence 3466889999999997654 566678766654443221 11 13466777778888776667778888888775
Q ss_pred CCCCCHHHHHHHHHhcC-CCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccC-cC-----CCCc-c
Q 001531 712 KGNINIEELRKAAEANR-DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG-LT-----SPGY-I 782 (1058)
Q Consensus 712 ~g~iD~e~L~~~i~~~~-~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~g-l~-----~pg~-~ 782 (1058)
.|++++++.++... +++++|++++++ ..|.+. |+++|.++|+++|+++++|+++..++.| .. .++. .
T Consensus 161 ---~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~-~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~ 236 (406)
T PRK13393 161 ---NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIA-PIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLAD 236 (406)
T ss_pred ---CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchh-CHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCC
Confidence 58889988886542 367888888884 689998 7999999999999999999998644311 11 1111 1
Q ss_pred CCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHH
Q 001531 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 862 (1058)
Q Consensus 783 GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~ 862 (1058)
..||++.++.|.|+. +| |++++++++.+.+.... + ... .+++ +++..++++.+.+..
T Consensus 237 ~~~i~~~tlsKa~g~------~G-G~~~~~~~~~~~l~~~~-----------~--~~~-~t~~--~~p~~~aa~~aaL~~ 293 (406)
T PRK13393 237 RLTIIEGTLAKAFGV------MG-GYITGSAALCDFIRSFA-----------S--GFI-FTTS--LPPAVAAGALASVRH 293 (406)
T ss_pred CCeEEEEeCchhhcc------cC-ceeeCCHHHHHHHHHhC-----------c--Cce-ecCc--cCHHHHHHHHHHHHH
Confidence 258888888898853 33 67777666544332100 0 000 0100 122223334444555
Q ss_pred HchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHH-CCccccCCCCC
Q 001531 863 MGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD-YGFHGPTMSWP 940 (1058)
Q Consensus 863 lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~-~Gi~~~~~~~p 940 (1058)
+...+.. .++..++++++.++|++. +++. ++ .+++ +.+.+.. ..+..++.++|.+ +||.+....+|
T Consensus 294 ~~~~~~~--~~~~~~~~~~l~~~L~~~g~~~~-~~-~~~i---~~v~~~~-----~~~~~~l~~~L~~~~Gi~v~~~~~p 361 (406)
T PRK13393 294 LKASSAE--RERHQDRVARLRARLDKAGIPHL-PN-PSHI---VPVMVGD-----PVLCKQISDELLDRYGIYVQPINYP 361 (406)
T ss_pred HhhCHHH--HHHHHHHHHHHHHHHHHcCCCcC-CC-CCCe---EEEEeCC-----HHHHHHHHHHHHHhCCEEEEeECCC
Confidence 4333322 234567788999999874 4432 22 2332 2222210 1245789999987 59998655444
Q ss_pred -C---CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 941 -V---PGTLMIEPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 941 -~---~~~Lris~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
+ .+.+||+++..+|++|+|+++++|++++.++
T Consensus 362 ~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 362 TVPRGTERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred CCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 2 2679999999999999999999999987654
No 155
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.73 E-value=6e-16 Score=180.26 Aligned_cols=301 Identities=14% Similarity=0.131 Sum_probs=191.9
Q ss_pred hhcHHHHHHHHHHHHHHHhC--CCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEE
Q 001531 627 AQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1058)
Q Consensus 627 ~qG~~~~~~el~~~lael~G--~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~v 704 (1058)
.+|..++...+.+++.+.+| .+...+..++|++. +..++++.+. +++++|+++...|..+...+...|+++
T Consensus 60 ~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~--al~~~~~~l~-----~~gd~vl~~~p~y~~~~~~~~~~g~~~ 132 (382)
T PRK06108 60 NLGIPELREALARYVSRLHGVATPPERIAVTSSGVQ--ALMLAAQALV-----GPGDEVVAVTPLWPNLVAAPKILGARV 132 (382)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHH--HHHHHHHHhc-----CCCCEEEEeCCCccchHHHHHHCCCEE
Confidence 46777778788888888888 44444444444432 2333333321 246789999888877777788999999
Q ss_pred EEEcCCCC---CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--ccHHHHHHHHHHcCCEEEEeccCcccccC--c
Q 001531 705 VSVGTDAK---GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVG--L 776 (1058)
Q Consensus 705 v~V~~d~~---g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~al~g--l 776 (1058)
+.+|.+.+ +.+|+++|+++++ +++++|++++| |.+|.+- +++++|+++|+++|+++++|+++.....+ -
T Consensus 133 ~~v~~~~~~~~~~~d~~~l~~~~~---~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~ 209 (382)
T PRK06108 133 VCVPLDFGGGGWTLDLDRLLAAIT---PRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGG 209 (382)
T ss_pred EEeeCCCCCCCccCCHHHHHHhcC---ccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCC
Confidence 99999743 4699999999886 68889999999 4788764 25899999999999999999986421111 0
Q ss_pred CCCC--c----cCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhH
Q 001531 777 TSPG--Y----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (1058)
Q Consensus 777 ~~pg--~----~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~ 850 (1058)
..+. . ..-.+++.+++|+|+. .|.++|++.+++++...+.... ...+...+ ...+
T Consensus 210 ~~~~~~~~~~~~~~~i~~~S~SK~~g~----~G~RiG~~~~~~~~~~~~~~~~------------~~~~~~~~--~~~q- 270 (382)
T PRK06108 210 RAPSFLDIAEPDDRIIFVNSFSKNWAM----TGWRLGWLVAPPALGQVLEKLI------------EYNTSCVA--QFVQ- 270 (382)
T ss_pred CCCCHhhcCCCcCCEEEEeechhhccC----cccceeeeeCCHHHHHHHHHHH------------HhcccCCC--hHHH-
Confidence 0111 0 1234777889998854 3678999999876655432100 00011111 1112
Q ss_pred HHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHH-H
Q 001531 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-D 929 (1058)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~-~ 929 (1058)
.++...+ ..+.+.+++..++...+.+++.+.|++...+.+..+++..+ ++++++. ..+..++++.|. +
T Consensus 271 ---~a~~~~l-~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~--~~~~l~~-----~~~~~~~~~~ll~~ 339 (382)
T PRK06108 271 ---RAAVAAL-DEGEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMY--AFFRIPG-----VTDSLALAKRLVDE 339 (382)
T ss_pred ---HHHHHHH-hCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEE--EEEeCCC-----CCCHHHHHHHHHHh
Confidence 1222222 22344456666667778888999887642222222333221 3456542 246788999886 5
Q ss_pred CCccc-cCCCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001531 930 YGFHG-PTMSWP--VPGTLMIEPTESESKEELDRYCDALISIR 969 (1058)
Q Consensus 930 ~Gi~~-~~~~~p--~~~~Lris~te~~t~eeid~fi~aL~~i~ 969 (1058)
+||.+ +...|. ..+++||+++. +.++++..++.|++++
T Consensus 340 ~gV~v~pg~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l 380 (382)
T PRK06108 340 AGLGLAPGTAFGPGGEGFLRWCFAR--DPARLDEAVERLRRFL 380 (382)
T ss_pred CCEEEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHH
Confidence 79986 333332 25789999987 7888888888887754
No 156
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.73 E-value=1.2e-15 Score=175.21 Aligned_cols=310 Identities=16% Similarity=0.107 Sum_probs=207.4
Q ss_pred HHHHHHHHHHhcCC--cccccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCC
Q 001531 151 SQMIEHMQKLASMN--KVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPM 228 (1058)
Q Consensus 151 ~e~~~~~~~la~~n--~~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~ 228 (1058)
.+.++|+++--+.. .+.++|||+..+|..+.+.+. .+...+ |..+.+.++++.+|+++|.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~ylgl~~~~~~~~~~~~-~~~~~~---------------g~~~~~~~Le~~lA~~~g~~~ 71 (346)
T TIGR03576 8 EKALEIIREKISRGGRDSLYDLTGLAGGFKIDEEDLE-LLETYV---------------GPAIFEEKVQELGREHLGGPE 71 (346)
T ss_pred HHHHHHHHHHHhccCCccccccccCCCChhHHHHHHH-HHHHhc---------------CCHHHHHHHHHHHHHHcCCCc
Confidence 45677777665555 568899999998877777663 443321 344678889999999999988
Q ss_pred cceEeecchHHHHHHHHHHhccccCCCCEEEEc---CCCCHHHHHHHHHhhcCCCeEEEEe-CchhhhccCCCEeEEEEE
Q 001531 229 SNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIA---SNCHPQTIDICITRADGFDIKVVVS-DLKDIDYKSGDVCGVLVQ 304 (1058)
Q Consensus 229 anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~---~~~Hps~~~~~~~~a~~~gi~v~~v-~~~~l~~l~~~t~~V~v~ 304 (1058)
.++.+++||+.++.+++.++. ++||+|+++ ...|+++...++. .|.++... ++++++. .+++++|+++
T Consensus 72 e~ilv~~gg~~a~~~~~~al~---~~gd~Vli~~~d~p~~~s~~~~~~l----~ga~~~~~~~l~~l~~-~~~~~lIiit 143 (346)
T TIGR03576 72 EKILVFNRTSSAILATILALE---PPGRKVVHYLPEKPAHPSIPRSCKL----AGAEYFESDELSELKK-IDGTSLVVIT 143 (346)
T ss_pred ceEEEECCHHHHHHHHHHHhC---CCCCEEEECCCCCCCchhHHHHHHH----cCCEEeccCCHHHHhh-CcCceEEEEE
Confidence 889999999999998888774 379999864 5699999887753 36665432 3444432 3467888887
Q ss_pred cCCCceee---ccHHHHHHHHHhcCcEEEEEeccccccCCC-----CCCcccceEEEecC-cccccccCCCCCceEEEEE
Q 001531 305 YPGTEGEV---LDYGDFIKNAHANGVKVVMATDLLALTILK-----PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLAT 375 (1058)
Q Consensus 305 ~pn~~G~i---~dl~~I~~~a~~~galliV~a~~~slg~l~-----~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~ 375 (1058)
.++++|.+ .|+++|+++|+++|++++| ++.++.++.. +..++|+|++++|. |.+ +|+.+||+++
T Consensus 144 g~s~~G~v~~~~~L~~i~~la~~~~~~liv-DEAy~~~~~~~~~~~~~~~~~~divv~s~SKal------aG~r~G~v~~ 216 (346)
T TIGR03576 144 GSTMDLKVVSEEDLKRVIKQAKSKEAIVLV-DDASGARVRRLYGQPPALDLGADLVVTSTDKLM------DGPRGGLLAG 216 (346)
T ss_pred CCCCCCcccCHHHHHHHHHHHHHcCCEEEE-ECCccccccccCCCCCHHHcCCcEEEeccchhc------cccceEEEEe
Confidence 77899998 7999999999999999999 4566655422 11246789999987 854 3456789999
Q ss_pred ehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHH-HHHhCcccHHHHHHHHHHHH
Q 001531 376 SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY-AVYHGPEGLKTIAQRVHGLA 454 (1058)
Q Consensus 376 ~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~y-l~~~g~~Gl~~ia~~~~~~a 454 (1058)
++++++.|.. ...+++.|..+. ...+++. +..+ ..+.+.+...++.
T Consensus 217 ~~~li~~l~~-----------------------------~~~~~~~s~~~~-~~~aa~~aL~~~---~~~~~~~~l~~r~ 263 (346)
T TIGR03576 217 RKELVDKIKS-----------------------------VGEQFGLEAQAP-LLAAVVRALEEF---ELSRIRDAFKRKE 263 (346)
T ss_pred CHHHHHHHHH-----------------------------hhcCcccCccHH-HHHHHHHHHhhc---cHHHHHHHHHHHH
Confidence 9888776610 111222111111 2222221 1221 2355667777888
Q ss_pred HHHHHHHhcCCCeEEcCC-CCccEEEEecCC---HHHHHHHHHHcCceeeecc-----CCeEEEEeccCC-CHHHHHHHH
Q 001531 455 GTFALGLKKLGTVEVQGL-PFFDTVKVKCAD---AHAIASAAYKIEMNLRVVD-----SNTVTASFDETT-TLEDVDKLF 524 (1058)
Q Consensus 455 ~~l~~~L~~~G~~~l~~~-~~~~~v~i~~~~---~~~l~~~L~~~GI~~~~~~-----~~~lris~~~~~-t~edid~ll 524 (1058)
.++.+.++++ .+... ..| +.+++++ ...+.+.|.++||.+.... ++++|||+.... ++.+.+.++
T Consensus 264 ~~~~~~l~~~---~~~~~~~~f--~~~~~~~~~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~~~~~~ 338 (346)
T TIGR03576 264 EVYLRLFDKL---NVERTPTGF--VIKGVEEEKLIEIGLDLLRNYGIITITAVGMPGASKTLRFDLAAKDAERIGDDYLV 338 (346)
T ss_pred HHHHHHHHhC---CCCcCCCeE--EEEeCCCCCHHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEecChHHhcCHHHHH
Confidence 8888877744 33321 122 3345542 3455566667899886531 478999998533 334799999
Q ss_pred HHHhC
Q 001531 525 IVFAG 529 (1058)
Q Consensus 525 ~al~~ 529 (1058)
++|+.
T Consensus 339 ~al~~ 343 (346)
T TIGR03576 339 EAVKD 343 (346)
T ss_pred HHHHh
Confidence 99975
No 157
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.73 E-value=1.2e-16 Score=183.81 Aligned_cols=280 Identities=17% Similarity=0.208 Sum_probs=184.2
Q ss_pred HHHHHHHHHHhCCCceeeecCchHH-HHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCC
Q 001531 635 NNLGEWLCTITGFDSFSLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1058)
Q Consensus 635 ~el~~~lael~G~~~~~l~~~sGa~-ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g 713 (1058)
.++++.+++++|.+...+..++|++ +.. ++++.+. .++++|++++..++.+...+...|++++.+++++++
T Consensus 57 ~~lr~~ia~~~~~~~~~i~~~~G~~~~l~---~~~~~l~-----~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 128 (346)
T TIGR01141 57 AELKQALADYYGVDPEQILLGNGSDEIIE---LLIRAFL-----EPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDEDG 128 (346)
T ss_pred HHHHHHHHHHhCcChHHEEEcCCHHHHHH---HHHHHhc-----CCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCCC
Confidence 4788999999998765555555544 332 2233321 246789998876654555567899999999998889
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHc--CCEEEEeccCcccccCcCCC----CccCCcE
Q 001531 714 NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQVGLTSP----GYIGADV 786 (1058)
Q Consensus 714 ~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~--g~lv~vD~a~~~al~gl~~p----g~~GaDi 786 (1058)
.+|+++++++++ +++++|++++|+ .+|.+. +++++.++++.+ |+++++|+++. .+..-..+ .....++
T Consensus 129 ~~d~~~l~~~~~---~~~~~v~l~~p~NptG~~~-~~~~~~~l~~~~~~~~~ii~D~~y~-~~~~~~~~~~~~~~~~~~i 203 (346)
T TIGR01141 129 QLDLEDILVAID---DKPKLVFLCSPNNPTGNLL-SRSDIEAVLERTPEDALVVVDEAYG-EFSGEPSTLPLLAEYPNLI 203 (346)
T ss_pred CCCHHHHHHhcC---CCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEECchh-hhcCCccHHHHHhhCCCEE
Confidence 999999999875 789999999984 789988 688888888877 99999999864 12111011 1122346
Q ss_pred EEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001531 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1058)
Q Consensus 787 ~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1058)
+..+++|+|+. +|+++|++++++++.+.+.... ...+++ ...+ .++..++... +
T Consensus 204 ~~~S~sK~~g~----~G~r~G~~~~~~~~~~~~~~~~--------------~~~~~~--~~~~----~~~~~~l~~~--~ 257 (346)
T TIGR01141 204 VLRTLSKAFGL----AGLRIGYAIANAEIIDALNKVR--------------APFNLS--RLAQ----AAAIAALRDD--D 257 (346)
T ss_pred EEehhhHhhhc----hhhhceeeecCHHHHHHHHhcc--------------CCCCCC--HHHH----HHHHHHhCCH--H
Confidence 67888999853 4678999999877665542110 001111 1112 2222333222 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccC-CCCC-CCCE
Q 001531 867 GLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWP-VPGT 944 (1058)
Q Consensus 867 Gl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~-~~~p-~~~~ 944 (1058)
.+++..++..+++.++.+.|+++..+....+.+. -++++++ + +.+++.++|.++||.+.. ..|+ .++.
T Consensus 258 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~---~~~~~~~------~-~~~~~~~~L~~~gI~v~~g~~f~~~~~~ 327 (346)
T TIGR01141 258 FIEKTVEEINAERERLYDGLKKLPGLEVYPSDAN---FVLIRFP------R-DADALFEALLEKGIIVRDLNSYPGLPNC 327 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEECCCcCC---EEEEecC------C-CHHHHHHHHHHCCeEEEeCCCcCCCCCe
Confidence 3566667777888899999986422211111222 2456654 2 578999999999998643 2232 2688
Q ss_pred EEEEcCCCCCHHHHHHHHHHHH
Q 001531 945 LMIEPTESESKEELDRYCDALI 966 (1058)
Q Consensus 945 Lris~te~~t~eeid~fi~aL~ 966 (1058)
+|++++ +++|+++++++|+
T Consensus 328 iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 328 LRITVG---TREENDRFLAALR 346 (346)
T ss_pred EEEecC---CHHHHHHHHHHhC
Confidence 999975 7899999998873
No 158
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.73 E-value=3.8e-16 Score=181.88 Aligned_cols=308 Identities=13% Similarity=0.066 Sum_probs=190.0
Q ss_pred HHHHHHHHHHHHHhCCCc---eeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHH--HHhCCc-EEE
Q 001531 632 EMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT--AAMCGM-KIV 705 (1058)
Q Consensus 632 ~~~~el~~~lael~G~~~---~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~--a~~~G~-~vv 705 (1058)
+++.+.++.+++++|.+. +.+..++|+.|..+++..+ . . .++..|++ ...|+.+-.. ++..|+ +++
T Consensus 48 ~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l---~--~--~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~ 119 (378)
T PRK03080 48 ALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSL---L--G--ARRVDHLA-WESFGSKWATDVVKQLKLEDPR 119 (378)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhc---C--C--CCcceEEE-eCHHHHHHHHHHHhhcCCCCce
Confidence 567889999999999842 3344557776665444333 1 1 12344554 4456554332 356799 999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCC
Q 001531 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA 784 (1058)
Q Consensus 706 ~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~Ga 784 (1058)
.++.+.++.+|+++++. ++.|.+++- +.+|++. |+++|++ |++|++++||+++..+...+. .. .+
T Consensus 120 ~~~~~~g~~~d~~~i~~--------~~~V~~~h~~t~tG~~~-pi~~I~~--~~~g~~~vVDa~qs~G~~pid-v~--~i 185 (378)
T PRK03080 120 VLEADYGSLPDLSAVDF--------DRDVVFTWNGTTTGVRV-PVARWIG--ADREGLTICDATSAAFALPLD-WS--KL 185 (378)
T ss_pred EeccCCCCCCCHhhcCC--------CCCEEEEecCCccceec-cchhhcc--ccCCCeEEEecccccccCCCC-HH--HC
Confidence 99987777888887331 334666664 5689998 7999999 899999999999764332221 11 37
Q ss_pred cEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCC----CCC------CCCCCCCCCCCCccchhhHHHHH
Q 001531 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG----GIP------APEKSQPLGTIAAAPWGSALILP 854 (1058)
Q Consensus 785 Di~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~----d~g------~~~~~~~t~~i~sa~~g~~~~~~ 854 (1058)
|+++++.||||+ |.||+|++++++++.+.+.....++.. ++. ....+.++.++.. . ..+.
T Consensus 186 D~~~~s~~K~l~-----~P~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~----i-~~i~ 255 (378)
T PRK03080 186 DVYTFSWQKVLG-----GEGGHGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPS----M-LTVE 255 (378)
T ss_pred cEEEEehhhhCC-----CCCceEEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCch----H-HHHH
Confidence 999999999995 236899999998766544222222110 100 0001122222221 1 1122
Q ss_pred HHHHHHHHHchh-hHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCC
Q 001531 855 ISYTYIAMMGSK-GLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 931 (1058)
Q Consensus 855 ~a~a~l~~lG~e-Gl~~~a~~~~~~a~yL~~~L~~~--~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~G 931 (1058)
...+.+..+-++ |+.++.++...+++++.++|+++ +.+....+.......+.|.++.. ..+. ..++.++|.++|
T Consensus 256 ~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~--~~~~-~~~~~~~l~~~~ 332 (378)
T PRK03080 256 DYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDA--QAAV-DAAAVAKLLREN 332 (378)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCc--hHHH-HHHHHHHHHHcC
Confidence 223455566565 78888888889999999999875 23321111111111234444310 0012 235667777778
Q ss_pred ccccCCCCC-CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001531 932 FHGPTMSWP-VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1058)
Q Consensus 932 i~~~~~~~p-~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~~ 974 (1058)
+.+..-.+. ..+.+||++..++|++|||+|+++|++++++.+.
T Consensus 333 i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~~ 376 (378)
T PRK03080 333 GAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFERLKA 376 (378)
T ss_pred CeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 765421111 2478999999999999999999999999887664
No 159
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.73 E-value=5.7e-16 Score=181.16 Aligned_cols=296 Identities=17% Similarity=0.220 Sum_probs=192.8
Q ss_pred hhcHHHHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEE
Q 001531 627 AQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVS 706 (1058)
Q Consensus 627 ~qG~~~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~ 706 (1058)
.+|..++..++++++++++|.+. .+..++|+++..+++ +.+. +++++|++++..|..+...+.+.|.+++.
T Consensus 82 ~~G~~~l~~~l~~~la~~~g~~~-~i~~tsG~~a~~~~~---~~l~-----~~gd~vi~~~~~~~~~~~~~~~~~~~~~~ 152 (397)
T PRK06939 82 ICGTQDLHKELEEKLAKFLGTED-AILYSSCFDANGGLF---ETLL-----GKEDAIISDALNHASIIDGVRLCKAKRYR 152 (397)
T ss_pred ccCCcHHHHHHHHHHHHHhCCCc-EEEEcChHHHHHHHH---HHhC-----CCCCEEEEEhhhhHHHHHHHHhcCCceEE
Confidence 46777788899999999999774 456667766654433 3321 35789999998887766667888999888
Q ss_pred EcCCCCCCCCHHHHHHHHHhc---CCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcC-C--C
Q 001531 707 VGTDAKGNINIEELRKAAEAN---RDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-S--P 779 (1058)
Q Consensus 707 V~~d~~g~iD~e~L~~~i~~~---~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~-~--p 779 (1058)
++. .|+++++++++++ +.++++|+.... |.+|..+ ++++|.++|+++|+++++|+++..+..+.. . +
T Consensus 153 ~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~-~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~ 226 (397)
T PRK06939 153 YAN-----NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIA-PLPEICDLADKYDALVMVDDSHAVGFVGENGRGTV 226 (397)
T ss_pred eCC-----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcC-CHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHH
Confidence 875 5899999998642 226777776543 4578887 799999999999999999999742221110 0 0
Q ss_pred ---C-ccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHH
Q 001531 780 ---G-YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 855 (1058)
Q Consensus 780 ---g-~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~ 855 (1058)
+ ..+.|+++.++||+|+ |+.+|++++++++.+.+-... .....++.. ....+++
T Consensus 227 ~~~~~~~~~~i~~~S~sK~~~------g~r~G~v~~~~~~~~~l~~~~-----------~~~~~~~~~-----~~~~~~a 284 (397)
T PRK06939 227 EHFGVMDRVDIITGTLGKALG------GASGGYTAGRKEVIDWLRQRS-----------RPYLFSNSL-----APAIVAA 284 (397)
T ss_pred HHcCCCCCCcEEEEECHHHhC------ccCceEEEeCHHHHHHHHHhC-----------ccccccCCC-----CHHHHHH
Confidence 1 1257899999999983 346799998876655431100 000001111 1111222
Q ss_pred HHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccc
Q 001531 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 934 (1058)
Q Consensus 856 a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~ 934 (1058)
+.+.+..+. ++ .+..++..++++++.+.|++. +++. .+.+.+ +.+.+. .+.+..+++++|.++||.+
T Consensus 285 ~~~al~~~~-~~-~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~~~~---~~~~~~-----~~~~~~~~~~~L~~~gI~v 352 (397)
T PRK06939 285 SIKVLELLE-ES-DELRDRLWENARYFREGMTAAGFTLG--PGEHPI---IPVMLG-----DAKLAQEFADRLLEEGVYV 352 (397)
T ss_pred HHHHHHHHh-cC-HHHHHHHHHHHHHHHHHHHHcCCCcC--CCCCCE---EEEEEC-----CHHHHHHHHHHHHHCCceE
Confidence 233333332 21 345566667888999999874 4432 112222 222222 1234678999999999986
Q ss_pred cCCCCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 935 PTMSWPV----PGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 935 ~~~~~p~----~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
....||. .+.+|++++..++++||+++++.|++++++
T Consensus 353 ~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~ 393 (397)
T PRK06939 353 IGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKE 393 (397)
T ss_pred eeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 5434442 357999999888999999999999988765
No 160
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.73 E-value=6.6e-16 Score=182.52 Aligned_cols=335 Identities=16% Similarity=0.203 Sum_probs=206.8
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhC--CCceeeecCchHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIR 669 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G--~~~~~l~~~sGa~ge~a~llair 669 (1058)
..+|++.+.+..++..+ +....+....-+. .+...++.+.|++++. ++. .++.++|++++++++..+|
T Consensus 54 ~~lGh~~p~v~~ai~~q-~~~~~~~~~~~~~--------~~~~~~la~~l~~~~p~~~~~-v~f~~sGseA~e~A~klar 123 (423)
T PRK05964 54 ATHGHNHPYIDQAIREQ-LDRLDHVIFAGFT--------HEPAERLAQRLVALTPGGLDH-VFFSDSGSVAVEVALKMAL 123 (423)
T ss_pred ccCCCCCHHHHHHHHHH-HhhCCCccccccC--------CHHHHHHHHHHHHhCCCCCCE-EEEeCCcHHHHHHHHHHHH
Confidence 46788887776666555 2221111110011 1223478888999884 443 4667899999999999999
Q ss_pred HHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCC------------cEEEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEE
Q 001531 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG------------MKIVSVGTDAK--GNINIEELRKAAEANRDNLSTL 734 (1058)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G------------~~vv~V~~d~~--g~iD~e~L~~~i~~~~~~taaV 734 (1058)
.|...+|..+|.+|| ...++||..-.+....+ ..+..+++..+ ...+++++++.++++.+++++|
T Consensus 124 ~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~~~iaav 203 (423)
T PRK05964 124 QYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHAGEIAAF 203 (423)
T ss_pred HHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCCCcEEEE
Confidence 987666644566666 46788997654433211 12334444211 1223889999997666788888
Q ss_pred EEEc-C-CCccccc---ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCc--------cCCcEEEeCCccccccCCCC
Q 001531 735 MVTY-P-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGG 801 (1058)
Q Consensus 735 ~vt~-P-n~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~--------~GaDi~~~s~hKtf~~P~g~ 801 (1058)
+++. . +..|+.. +.+++|.++|++||+++++|+++ .|+.++|. ..+|++++ .|+|+ +
T Consensus 204 i~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~----tg~gr~G~~~a~~~~~v~pDi~~~--~K~l~----g 273 (423)
T PRK05964 204 IVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIA----TGFGRTGTLFACEQAGVSPDIMCL--SKGLT----G 273 (423)
T ss_pred EEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechh----hCCCcCcchhHHHhcCCCCCeeee--ehhhh----c
Confidence 8864 2 3345543 25999999999999999999985 33444442 23688765 48873 3
Q ss_pred CCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHH
Q 001531 802 GGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANY 881 (1058)
Q Consensus 802 GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~y 881 (1058)
|+-.+|.+++++++.+.+..... . . . ....+++.|+++.++++.+.+..+..+++. ++...+.++
T Consensus 274 G~~p~~av~~~~~i~~~~~~~~~-~--------~--~-~~~~~T~~~np~~~aaa~a~l~~l~~~~~~---~~~~~~g~~ 338 (423)
T PRK05964 274 GYLPLAATLCTAEIFEAFYSDDR-A--------K--A-FMHSPSYTANPLACAAANASLDLFEDEPVL---ERVAALSAG 338 (423)
T ss_pred CcccceEEEEcHHHHHhhhcCCc-c--------c--c-cccCCCCCcCHHHHHHHHHHHHHHHhcCHH---HHHHHHHHH
Confidence 43457778888877665531100 0 0 0 001112334566666677777776655544 445566788
Q ss_pred HHHHHhcc--CCee--eccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHH
Q 001531 882 MAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEE 957 (1058)
Q Consensus 882 L~~~L~~~--~~v~--~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~ee 957 (1058)
+++.|++. ++.+ +.|. |. + +.+.+..- ..+.....+.+.|.++|+.+... .+.+||+|+..+|++|
T Consensus 339 l~~~l~~l~~~~~i~~vrg~-Gl-~--~~i~l~~~--~~~~~~~~l~~~l~~~Gv~v~~~----~~~lR~~p~l~~t~ed 408 (423)
T PRK05964 339 LAEGLEPFRDLPGVADVRVL-GA-I--GAVELDRP--VLERDGPALRAFALERGVLLRPL----GNTIYLMPPYIITAEE 408 (423)
T ss_pred HHHHHHhhccCCCeEEeecc-cE-E--EEEEeccC--cchhHHHHHHHHHHHCCeEEEec----CCEEEEeCCcccCHHH
Confidence 88888764 2221 1221 21 1 22333210 00012568899999999987532 3689999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 001531 958 LDRYCDALISIREE 971 (1058)
Q Consensus 958 id~fi~aL~~i~~e 971 (1058)
||+++++|+++++|
T Consensus 409 Id~~v~~l~~al~~ 422 (423)
T PRK05964 409 LDRITDAIVEVADE 422 (423)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998876
No 161
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.73 E-value=1e-15 Score=177.44 Aligned_cols=211 Identities=14% Similarity=0.125 Sum_probs=159.7
Q ss_pred HHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---hhh
Q 001531 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KDI 291 (1058)
Q Consensus 215 e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~---~~l 291 (1058)
.+|+.+|+|.|.+. +.++.+|++|+.++++++ + ++||+||++...|..+...++..++.+|+++.+++. +++
T Consensus 66 ~le~~la~LEg~~~--a~~~~SGmaAi~~~~~~l-l--~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~d~~~l 140 (395)
T PRK08114 66 SLQEAMCELEGGAG--CALYPCGAAAVANAILAF-V--EQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPLIGADI 140 (395)
T ss_pred HHHHHHHHHhCCCe--EEEEhHHHHHHHHHHHHH-c--CCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHH
Confidence 46689999999876 788999999999888876 3 389999999999999999887777789999999875 456
Q ss_pred hc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcC--cEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCC
Q 001531 292 DY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANG--VKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1058)
Q Consensus 292 ~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~g--alliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1058)
++ ++++|++|++++| |++|.+.||++|+++||++| ++++| ++.++.+.+..|.+|||||+++|+ |+|++|-.
T Consensus 141 ~~~l~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvV-DnT~a~p~~~~pl~~GaDivv~S~tKyl~Ghsd-- 217 (395)
T PRK08114 141 AKLIQPNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMI-DNTWAAGVLFKALDFGIDISIQAGTKYLVGHSD-- 217 (395)
T ss_pred HHhcCCCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEE-ECCCccccccCHHHcCCcEEEEcCcccccCCCc--
Confidence 66 8889999999997 79999999999999999985 99999 457777888899999999999999 77865422
Q ss_pred CCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHH
Q 001531 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1058)
Q Consensus 367 GP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~i 446 (1058)
-.+|++++++++.+.+- ..++.-|. .. ++. ..|+...|-+-|.-.
T Consensus 218 -v~~G~v~~~~~~~~~l~-------------------------~~~~~~G~--~~--~p~-----~a~l~~rgl~TL~lR 262 (395)
T PRK08114 218 -AMIGTAVANARCWEQLR-------------------------ENSYLMGQ--MV--DAD-----TAYMTSRGLRTLGVR 262 (395)
T ss_pred -ceeEEEEcCHHHHHHHH-------------------------HHHHhccC--CC--CHH-----HHHHHHcCCCcHHHH
Confidence 24577777665433220 00011110 00 110 123455555556666
Q ss_pred HHHHHHHHHHHHHHHhcCCCeE
Q 001531 447 AQRVHGLAGTFALGLKKLGTVE 468 (1058)
Q Consensus 447 a~~~~~~a~~l~~~L~~~G~~~ 468 (1058)
.+|..++|..+++.|++.+.++
T Consensus 263 ~~~~~~na~~va~~L~~hp~V~ 284 (395)
T PRK08114 263 LRQHEESSLKVAEWLAEHPEVA 284 (395)
T ss_pred HHHHHHHHHHHHHHHHcCCCEe
Confidence 7888899999999999886454
No 162
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.73 E-value=1.4e-15 Score=177.91 Aligned_cols=306 Identities=17% Similarity=0.191 Sum_probs=190.7
Q ss_pred hcHHHHHHHHHHHHHHHhCC--CceeeecCch-HHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEE
Q 001531 628 QGYQEMFNNLGEWLCTITGF--DSFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1058)
Q Consensus 628 qG~~~~~~el~~~lael~G~--~~~~l~~~sG-a~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~v 704 (1058)
+|..++...+.+++.+..|. +...+..++| +++... +++.+. .+++.|++++..|+.+...++..|.++
T Consensus 68 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~---~~~~~~-----~~gd~vl~~~p~y~~~~~~~~~~g~~~ 139 (393)
T PRK05764 68 AGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYN---AFMALL-----DPGDEVIIPAPYWVSYPEMVKLAGGVP 139 (393)
T ss_pred CChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHH---HHHHhc-----CCCCEEEecCCCCcchHHHHHHcCCEE
Confidence 56655555566666555454 3333444444 444432 333321 246789999988888777788899999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCccc-ccCcC-
Q 001531 705 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVGLT- 777 (1058)
Q Consensus 705 v~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~a-l~gl~- 777 (1058)
+.++.+++ +.+|+++++++++ +++++|++++|+ .+|.+- +++++|+++|+++|+++++|.++... +.+..
T Consensus 140 ~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~ 216 (393)
T PRK05764 140 VFVPTGEENGFKLTVEQLEAAIT---PKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEF 216 (393)
T ss_pred EEEecCcccCCcCCHHHHHHhhC---ccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCc
Confidence 99999743 5789999999996 688899999995 688873 36999999999999999999986321 11110
Q ss_pred -C-----CCccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHH
Q 001531 778 -S-----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1058)
Q Consensus 778 -~-----pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~ 851 (1058)
. +...+.+++..+++|+|+.| |.++|+++.++++...+... ......+++ ...+
T Consensus 217 ~~~~~~~~~~~~~~i~~~s~SK~~~~~----G~RiG~i~~~~~~~~~~~~~------------~~~~~~~~~--~~~q-- 276 (393)
T PRK05764 217 TSIASLSPELRDRTITVNGFSKAYAMT----GWRLGYAAGPKELIKAMSKL------------QSHSTSNPT--SIAQ-- 276 (393)
T ss_pred ccHHHcCCCCcCCEEEEecCcccccCc----cceeEEEecCHHHHHHHHHH------------HhhcccCCC--hHHH--
Confidence 0 12234578888889988644 56799999887665543210 000011111 1111
Q ss_pred HHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHH-HC
Q 001531 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DY 930 (1058)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~-~~ 930 (1058)
.++...+.. ..+.+++..+....+++++.+.|+++..+.+..+++.++ ++++++......+.+..++.+.|. ++
T Consensus 277 --~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~ 351 (393)
T PRK05764 277 --YAAVAALNG-PQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPEGAFY--VFPNVSKLLGKSITDSLEFAEALLEEA 351 (393)
T ss_pred --HHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCcceE--EEEecccccccccCCHHHHHHHHHHhC
Confidence 111222221 233445555556677888989998752232223333222 345554211111224578888876 57
Q ss_pred Cccc-cCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 931 GFHG-PTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 931 Gi~~-~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
||.+ +...|+..+.+||++. .+++++++.++.|.+++.+
T Consensus 352 gi~v~~g~~f~~~~~vRis~~--~~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 352 GVAVVPGIAFGAPGYVRLSYA--TSLEDLEEGLERIERFLES 391 (393)
T ss_pred CEEEccccccCCCCEEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 9986 4444555689999986 4689999999999887654
No 163
>PRK15029 arginine decarboxylase; Provisional
Probab=99.72 E-value=1e-15 Score=187.80 Aligned_cols=306 Identities=13% Similarity=0.078 Sum_probs=196.3
Q ss_pred HHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCC
Q 001531 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1058)
Q Consensus 633 ~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~ 712 (1058)
.+.|.|+..++++|.+.+.|.+|++++|+.++++++. +++++||++++.|.+.-..+.+.|+++++++...+
T Consensus 206 ~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~--------~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~ 277 (755)
T PRK15029 206 AFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACM--------TDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRN 277 (755)
T ss_pred HHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhc--------CCCCEEEeecccHHHHHHHHHHcCCeEEEeccccc
Confidence 3789999999999999988999999989887776653 36789999999999888889999999999975422
Q ss_pred -----CCCC-----HHHHHHHHHhcCCCeE--------EEEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCcccc-
Q 001531 713 -----GNIN-----IEELRKAAEANRDNLS--------TLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ- 773 (1058)
Q Consensus 713 -----g~iD-----~e~L~~~i~~~~~~ta--------aV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al- 773 (1058)
|.++ ++.++++|+++ +..+ ++++|+|+|.|++- |+++|+++||++|++|+||+|+...+
T Consensus 278 ~~Gi~~~i~~~~~~~e~i~~~l~~~-p~~k~~~~~~~~avvlt~PTY~Gv~~-di~~I~~~~h~~~~~llvDEAhGah~~ 355 (755)
T PRK15029 278 RYGIIGPIYPQEMQPETLQKKISES-PLTKDKAGQKPSYCVVTNCTYDGVCY-NAKEAQDLLEKTSDRLHFDEAWYGYAR 355 (755)
T ss_pred ccCCccCCCccccCHHHHHHHHHhC-chhhhccccCceEEEEECCCCcceee-CHHHHHHHHHhcCCeEEEECccccccc
Confidence 4566 99999999875 3344 89999999999998 89999999999999999999974211
Q ss_pred -cC-cC--CCC-----c-cCCc-EEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCC
Q 001531 774 -VG-LT--SPG-----Y-IGAD-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTI 842 (1058)
Q Consensus 774 -~g-l~--~pg-----~-~GaD-i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i 842 (1058)
.. +. .+- . .|+| +++.|.||+++.- -..++|-++.. .+.+.-..+.. .- .-....
T Consensus 356 F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~al-----TQaS~LHv~~~-~~~id~~r~~~-------~l-~~~qST 421 (755)
T PRK15029 356 FNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNAL-----SQASYIHVREG-RGAINFSRFNQ-------AY-MMHATT 421 (755)
T ss_pred cCccccccccccccccccCCCceEEEEchhhcccch-----hhhhhheeCCC-ccccCHHHHHH-------HH-HHHcCC
Confidence 11 11 111 2 6899 9999999998521 13345555432 00111000000 00 000111
Q ss_pred CccchhhHHHHHHHHHHHHH-HchhhHHHHHHHHHHHHHHHHHHHhccCC------------------------------
Q 001531 843 AAAPWGSALILPISYTYIAM-MGSKGLTEASKIAILNANYMAKRLEKHYP------------------------------ 891 (1058)
Q Consensus 843 ~sa~~g~~~~~~~a~a~l~~-lG~eGl~~~a~~~~~~a~yL~~~L~~~~~------------------------------ 891 (1058)
+. .|-..+.+-.|..+|.. .|.+ ..+..+..+..++++|.++..
T Consensus 422 SP-SY~LmASLD~ar~~m~~~~G~~----l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 496 (755)
T PRK15029 422 SP-LYAICASNDVAVSMMDGNSGLS----LTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFA 496 (755)
T ss_pred Cc-HHHHHHHHHHHHHHHhhhhhHH----HHHHHHHHHHHHHHHHHhccccccccccccccccCcccccccccccccccc
Confidence 21 12111222233334433 3333 344556667777777754311
Q ss_pred ------------eeeccC--C--C-------c---cceEEEEeccccc-----ccCCCCHHHHHHHHHHCCccccCCCCC
Q 001531 892 ------------ILFRGV--N--G-------T---VAHEFIVDLRGLK-----NTAGIEPEDVAKRLMDYGFHGPTMSWP 940 (1058)
Q Consensus 892 ------------v~~~g~--~--~-------~---~~~e~vv~~~~~~-----~~~g~~~~~v~k~L~~~Gi~~~~~~~p 940 (1058)
+..-++ . + . -.-.+++.++.+. .+.|+.+..+.+.|.++||.+-..+
T Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L~~~gI~~E~~~-- 574 (755)
T PRK15029 497 DAPTKLLTTVQDCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTT-- 574 (755)
T ss_pred ccchhhhccccceeeecccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHHHHcCCEEEecC--
Confidence 100000 0 0 0 0012234432211 1234555699999999999876444
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001531 941 VPGTLMIEPTESESKEELDRYCDALISIRE 970 (1058)
Q Consensus 941 ~~~~Lris~te~~t~eeid~fi~aL~~i~~ 970 (1058)
..++.+-++...|++++++++++|.++.+
T Consensus 575 -~~~vL~l~s~g~t~~~~~~L~~aL~~~~~ 603 (755)
T PRK15029 575 -DFQIMFLFSMGVTRGKWGTLVNTLCSFKR 603 (755)
T ss_pred -CCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 36777778888999999999999998844
No 164
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.72 E-value=2.1e-15 Score=177.17 Aligned_cols=286 Identities=18% Similarity=0.208 Sum_probs=188.2
Q ss_pred HHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHH-cCCC-CCCEEE-EcCCCCCccHHHHHhC---------
Q 001531 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKA-RGDH-HRNVCI-IPVSAHGTNPATAAMC--------- 700 (1058)
Q Consensus 633 ~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~-~G~~-~r~~Vl-ip~saHg~~pa~a~~~--------- 700 (1058)
...++++.+++++|.+. .+..+||++++++++.++|.|+.. +|.+ ++++|+ ...+.||+.-......
T Consensus 84 ~~~~l~~~l~~~~~~~~-~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~ 162 (401)
T PRK00854 84 QLAPLYEELAALTGSHK-VLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGF 162 (401)
T ss_pred HHHHHHHHHHhhCCCCE-EEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccC
Confidence 35678899999999864 466789999998888888877532 2322 234555 5678899765443211
Q ss_pred ---CcEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-Ccccccc---cHHHHHHHHHHcCCEEEEeccCcccc
Q 001531 701 ---GMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQ 773 (1058)
Q Consensus 701 ---G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al 773 (1058)
...+..++. .|+++|++++. +++++|++++|+ ..|.+.+ ++++|+++|++||+++++|+++. ++
T Consensus 163 ~~~~~~~~~~~~-----~d~~~le~~i~---~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~-g~ 233 (401)
T PRK00854 163 GPFTPGFRVVPF-----GDAEALEAAIT---PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQT-GL 233 (401)
T ss_pred CCCCCCeEEeCC-----CCHHHHHHHhC---CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CC
Confidence 123444544 58999999996 789999999984 6788762 29999999999999999999974 22
Q ss_pred cCcCCCC--------ccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCcc
Q 001531 774 VGLTSPG--------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAA 845 (1058)
Q Consensus 774 ~gl~~pg--------~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa 845 (1058)
.+.| ...+|++++ .|+|+ +|...+|++++++++...+.... .....+
T Consensus 234 ---g~~g~~~~~~~~g~~~D~~~~--~K~l~----gg~~~ig~v~~~~~~~~~l~~~~--------------~~~t~~-- 288 (401)
T PRK00854 234 ---GRTGKLLAEEHEGIEADVTLI--GKALS----GGFYPVSAVLSNSEVLGVLKPGQ--------------HGSTFG-- 288 (401)
T ss_pred ---CCCchHhHHhhcCCCCCEEEe--ccccc----CCccCeEEEEEcHHHHhcccCCC--------------CCCCCC--
Confidence 2222 124688876 38884 34456899999987766553110 001112
Q ss_pred chhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCee--eccCCCccceEEEEecccccccCCCCHHH
Q 001531 846 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPED 922 (1058)
Q Consensus 846 ~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~--~~g~~~~~~~e~vv~~~~~~~~~g~~~~~ 922 (1058)
++...++++.+.|..+..+++ .++...+++++.+.|++. +... ..+ .+. .+.+.+.. ...+..+
T Consensus 289 --~~~~~~aa~~a~L~~l~~~~~---~~~~~~~~~~l~~~L~~~~~~~~~~~~g-~g~---~~~i~~~~----~~~~~~~ 355 (401)
T PRK00854 289 --GNPLACAVARAALKVLTEEGM---IENAAEMGAYFLEGLRSIRSNIVREVRG-RGL---MLAVELEP----EAGGARQ 355 (401)
T ss_pred --cCHHHHHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHHHhhccCceEEEec-cce---EEEEEEec----CchhHHH
Confidence 233344445555555544443 344556778899999875 3221 112 122 13333321 1235678
Q ss_pred HHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001531 923 VAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIR 969 (1058)
Q Consensus 923 v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~ 969 (1058)
+++.|.++||.+.... .+.+|++|+..+|++|||++++.|++++
T Consensus 356 ~~~~L~~~GV~v~~~~---~~~lR~~p~~~~t~e~i~~~i~~l~~~l 399 (401)
T PRK00854 356 YCEALKERGLLAKDTH---DHTIRLAPPLVITREQVDWALEQIAKVL 399 (401)
T ss_pred HHHHHHHCCeEEecCC---CCEEEEeCCcccCHHHHHHHHHHHHHHh
Confidence 9999999999975322 4799999999999999999999998875
No 165
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.72 E-value=1.9e-15 Score=172.67 Aligned_cols=305 Identities=17% Similarity=0.158 Sum_probs=198.1
Q ss_pred cCCCCCCCCChHHHHHHHHh--CCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCC------CcceEeecchHHHHH
Q 001531 171 IGMGYYNTHVPPVILRNIME--NPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP------MSNASLLDEGTAAAE 242 (1058)
Q Consensus 171 lG~g~~~~~~p~~i~~~i~~--~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~------~anasl~~~~Taa~e 242 (1058)
+|.|.+|...++.+...+.. ++.....|.+. +|. .++++.++++++.+ ..++.+.+++|+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~----~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~ 73 (350)
T cd00609 3 LSIGEPDFPPPPEVLEALAAAALRAGLLGYYPD-----PGL----PELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALS 73 (350)
T ss_pred CCCCCCCCCCCHHHHHHHHHHhhccCCCCCCCC-----CCc----HHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHH
Confidence 35667777766666544442 22223333322 232 23445566665544 556778899999888
Q ss_pred HHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch----------hhhc-cCCCEeEEEEEcC-CCce
Q 001531 243 AMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK----------DIDY-KSGDVCGVLVQYP-GTEG 310 (1058)
Q Consensus 243 a~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~----------~l~~-l~~~t~~V~v~~p-n~~G 310 (1058)
+++.++. +++++|+++...|+++...++. .|++++.++.+ .++. .++++++|++++| |.+|
T Consensus 74 ~~~~~~~---~~g~~vl~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG 146 (350)
T cd00609 74 LLLRALL---NPGDEVLVPDPTYPGYEAAARL----AGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTG 146 (350)
T ss_pred HHHHHhC---CCCCEEEEcCCCchhHHHHHHH----CCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCC
Confidence 8777663 3789999999999998887653 57788777652 2223 5678999999988 6799
Q ss_pred eeccHHHH---HHHHHhcCcEEEEEeccccccCC--------CCCCcccceEEEecC-cccccccCCCCCceEEEEEeh-
Q 001531 311 EVLDYGDF---IKNAHANGVKVVMATDLLALTIL--------KPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQ- 377 (1058)
Q Consensus 311 ~i~dl~~I---~~~a~~~galliV~a~~~slg~l--------~~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~- 377 (1058)
.+.|++++ .++||++|++++|+. .++.+.. ...+.++.|++++|. |.|+. +|+.+|++++++
T Consensus 147 ~~~~~~~l~~l~~~~~~~~~~~ivD~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~----~g~~~G~i~~~~~ 221 (350)
T cd00609 147 AVLSEEELEELAELAKKHGILIISDE-AYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGL----PGLRIGYLIAPPE 221 (350)
T ss_pred cccCHHHHHHHHHHHHhCCeEEEEec-chhhceeCCcccccccCcCccCcEEEEeecccccCC----cccceEEEecCHH
Confidence 99876555 589999999999943 2222111 224567899999998 87752 456789999998
Q ss_pred hhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHH
Q 001531 378 EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTF 457 (1058)
Q Consensus 378 ~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l 457 (1058)
++.+.+.... + ..+++..+ ....++.+++ ... .++++++.+++.++++++
T Consensus 222 ~~~~~~~~~~-------------------------~-~~~~~~~~-~~~~~~~~~l--~~~-~~~~~~~~~~~~~~~~~l 271 (350)
T cd00609 222 ELLERLKKLL-------------------------P-YTTSGPST-LSQAAAAAAL--DDG-EEHLEELRERYRRRRDAL 271 (350)
T ss_pred HHHHHHHHHH-------------------------H-hcccCCCh-HHHHHHHHHH--hCc-HHHHHHHHHHHHHHHHHH
Confidence 6776652100 0 00112111 2222222221 211 168899999999999999
Q ss_pred HHHHhcCCCeEEcCCCCccEEEEecCC---HHHHHHHHHHcCceeeec------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001531 458 ALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 458 ~~~L~~~G~~~l~~~~~~~~v~i~~~~---~~~l~~~L~~~GI~~~~~------~~~~lris~~~~~t~edid~ll~al~ 528 (1058)
.+.|++.+...+........+.+..+. ...+.+.|.++||.+... .+..+|++++.. ++|+++++++|.
T Consensus 272 ~~~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 272 LEALKELGPLVVVKPSGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred HHHHHhcCCccccCCCccEEEEEecCCCChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 999999862332222211223444443 556777777889988654 357899999988 999999999985
No 166
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.72 E-value=8.7e-16 Score=179.14 Aligned_cols=295 Identities=17% Similarity=0.196 Sum_probs=190.2
Q ss_pred hhcHHHHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEE
Q 001531 627 AQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVS 706 (1058)
Q Consensus 627 ~qG~~~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~ 706 (1058)
.+|..++..++++++++++|.+. .+..++|+++.+ .+++.+. +++++|+++...|+.+...+.+.|.+++.
T Consensus 73 ~~g~~~l~~~l~~~l~~~~g~~~-~i~~~sG~~a~~---~a~~~~~-----~~gd~vi~~~~~~~~~~~~~~~~g~~~~~ 143 (385)
T TIGR01825 73 IAGTLRLHEELEEKLAKFKKTEA-ALVFQSGFNTNQ---GVLSALL-----RKGDIVLSDELNHASIIDGLRLTKATKKI 143 (385)
T ss_pred ccCCcHHHHHHHHHHHHHhCCCc-EEEECcHHHHHH---HHHHHhC-----CCCCEEEEEccccHHHHHHHHhcCCceEE
Confidence 35667788899999999999764 456667776543 3333331 25678998888887776666788888877
Q ss_pred EcCCCCCCCCHHHHHHHHHhcC-CCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCccc-cc--Cc---C-
Q 001531 707 VGTDAKGNINIEELRKAAEANR-DNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNA-QV--GL---T- 777 (1058)
Q Consensus 707 V~~d~~g~iD~e~L~~~i~~~~-~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~a-l~--gl---~- 777 (1058)
++ .+|++++++.+.+.. +++++|++.++ |.+|.+. ++++|+++|++||+++++|+++... +. +. .
T Consensus 144 ~~-----~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~-~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~ 217 (385)
T TIGR01825 144 YK-----HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVA-PLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHH 217 (385)
T ss_pred eC-----CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCcc-CHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhh
Confidence 65 389999999887432 36888877765 5679888 7999999999999999999997422 11 10 0
Q ss_pred CCCccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHH
Q 001531 778 SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 857 (1058)
Q Consensus 778 ~pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~ 857 (1058)
..-..+.|+++.++||+|+. +| |+++.++++.+.+.... .....++.. .+..+.++.
T Consensus 218 ~~~~~~~~i~~~s~sK~~~~------~g-G~~~~~~~~~~~~~~~~-----------~~~~~~~~~-----~~~~~~a~~ 274 (385)
T TIGR01825 218 FGLEDKVDIQVGTLSKAIGV------VG-GYAAGHKELIEYLKNRA-----------RPFLFSTAQ-----PPAVVAALA 274 (385)
T ss_pred cCCCcCCcEEEEeccHHhhc------CC-CEEecCHHHHHHHHHhC-----------ccccccCCC-----CHHHHHHHH
Confidence 01124678888999999852 33 77877766554431100 000001101 112222233
Q ss_pred HHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccC
Q 001531 858 TYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 936 (1058)
Q Consensus 858 a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~ 936 (1058)
+.+..+... .+..++...+++++.+.|++. +++. .+.+++ +.+.+.. ..+..++++.|.++||.++.
T Consensus 275 ~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~---~~~~~~~-----~~~~~~~~~~L~~~gi~v~~ 342 (385)
T TIGR01825 275 AAVDELQRS--PELMERLWDNTRFFKAGLGKLGYDTG--GSETPI---TPVVIGD-----EKAAQEFSRRLFDEGIFAQS 342 (385)
T ss_pred HHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCCC--CCCCCE---EEEEECC-----HHHHHHHHHHHHHCCcEEcc
Confidence 334333221 234455567788999999875 4432 222222 2222221 12357899999999998765
Q ss_pred CCCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 937 MSWPV----PGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 937 ~~~p~----~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
..||. .+.+|++++..++++||++++++|++++++
T Consensus 343 ~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 343 IVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred cCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 44542 267999999999999999999999988754
No 167
>PLN02483 serine palmitoyltransferase
Probab=99.72 E-value=1.2e-15 Score=182.95 Aligned_cols=295 Identities=17% Similarity=0.183 Sum_probs=187.9
Q ss_pred HHHHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcC
Q 001531 630 YQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGT 709 (1058)
Q Consensus 630 ~~~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~ 709 (1058)
......++++.+++++|.+.+ +..++|..++.+++.++. ++++.|+++...|.+....++..|++++.++.
T Consensus 144 ~~~~~~ele~~lA~~~g~~~a-i~~~~G~~an~~~i~al~--------~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~ 214 (489)
T PLN02483 144 TTKLHRELEELVARFVGKPAA-IVFGMGYATNSTIIPALI--------GKGGLIISDSLNHNSIVNGARGSGATIRVFQH 214 (489)
T ss_pred CcHHHHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHhC--------CCCCEEEEcchhhHHHHHHHHHcCCeEEEEeC
Confidence 344567899999999997764 445667655533332221 35789999998887777778899999999986
Q ss_pred CCCCCCCHHHHHHHHHhc----CCCe-----EEEEEEcC--CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcC-
Q 001531 710 DAKGNINIEELRKAAEAN----RDNL-----STLMVTYP--STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT- 777 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~----~~~t-----aaV~vt~P--n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~- 777 (1058)
.|+++|++++++. .++| +.+++..+ |..|.+. ++++|.++|+++|+++++|+++..+..|..
T Consensus 215 -----~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~-~l~~I~~la~~~~~~livDEa~s~g~~G~~G 288 (489)
T PLN02483 215 -----NTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELC-KLPEIVAVCKKYKAYVYLDEAHSIGAVGKTG 288 (489)
T ss_pred -----CCHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCccc-CHHHHHHHHHHcCCEEEEECcCccCccCCCC
Confidence 3678887776531 1232 44555554 4578887 799999999999999999999753221110
Q ss_pred --CC---C--ccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhH
Q 001531 778 --SP---G--YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (1058)
Q Consensus 778 --~p---g--~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~ 850 (1058)
.. + ..+.||++.+++|+|+. + +|++++++++++.+.....+ ...+...+ +
T Consensus 289 ~g~~~~~~v~~~~~dI~~~SfSKs~g~------~-GG~i~~~~~li~~l~~~~~~-----------~~~~~~~~-p---- 345 (489)
T PLN02483 289 RGVCELLGVDPADVDIMMGTFTKSFGS------C-GGYIAGSKELIQYLKRTCPA-----------HLYATSMS-P---- 345 (489)
T ss_pred CchHHhcCCCcccCcEEEEecchhccc------C-ceEEEcCHHHHHHHHHhCcc-----------ccccCCcC-H----
Confidence 00 1 13579999999999953 2 28998887766554211000 00000111 1
Q ss_pred HHHHHHHHHHHH-Hchhh---HHHHHHHHHHHHHHHHHHHhcc-CCeeeccCC-CccceEEEEecccccccCCCCHHHHH
Q 001531 851 LILPISYTYIAM-MGSKG---LTEASKIAILNANYMAKRLEKH-YPILFRGVN-GTVAHEFIVDLRGLKNTAGIEPEDVA 924 (1058)
Q Consensus 851 ~~~~~a~a~l~~-lG~eG---l~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~-~~~~~e~vv~~~~~~~~~g~~~~~v~ 924 (1058)
..+..+.+.+.. ++.+| ..+..++..++++++.+.|++. +.+. ++. ++....++.+ ..+..+++
T Consensus 346 ~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~~v~--~~~~sp~~~l~l~~--------~~~~~~~~ 415 (489)
T PLN02483 346 PAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGFEVL--GDNDSPVMPIMLYN--------PAKIPAFS 415 (489)
T ss_pred HHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCCccc--CCCCCCEEEEEECC--------HHHHHHHH
Confidence 111112222322 22222 2344566778899999999885 4432 221 2322111111 12456899
Q ss_pred HHHHHCCccccCCCCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 925 KRLMDYGFHGPTMSWPV----PGTLMIEPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 925 k~L~~~Gi~~~~~~~p~----~~~Lris~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
++|.++||.+....||. .+.+||+++..+|++|||+++++|.++.+++
T Consensus 416 ~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~ 467 (489)
T PLN02483 416 RECLKQNVAVVVVGFPATPLLLARARICISASHSREDLIKALEVISEVGDLV 467 (489)
T ss_pred HHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 99999999876555641 3689999999999999999999999987654
No 168
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.72 E-value=9.6e-16 Score=178.43 Aligned_cols=290 Identities=14% Similarity=0.147 Sum_probs=185.4
Q ss_pred cHHHHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEc
Q 001531 629 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (1058)
Q Consensus 629 G~~~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~ 708 (1058)
|......++++.+++++|.+. .+..++|+++.+ .+++.+. +++++|+++...|+.+...+.+.|.+++.++
T Consensus 81 g~~~~~~~l~~~la~~~~~~~-~i~~~~g~~~~~---~~l~~~~-----~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~ 151 (385)
T PRK05958 81 GNSPAHEALEEELAEWFGAER-ALLFSSGYAANL---AVLTALA-----GKGDLIVSDKLNHASLIDGARLSRARVRRYP 151 (385)
T ss_pred CCcHHHHHHHHHHHHHhCCCc-EEEECcHHHHHH---HHHHHhC-----CCCCEEEEeCccCHHHHHHHHhcCCceEEeC
Confidence 444567789999999999653 455667775443 3333331 3568899998888877777888999999887
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCc---CCC-----
Q 001531 709 TDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL---TSP----- 779 (1058)
Q Consensus 709 ~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl---~~p----- 779 (1058)
. .|+++++++++..+++++++++..+ +.+|... ++++|+++|+++|+++++|+++..+..+. ..+
T Consensus 152 ~-----~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~-~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~ 225 (385)
T PRK05958 152 H-----NDVDALEALLAKWRAGRALIVTESVFSMDGDLA-PLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGL 225 (385)
T ss_pred C-----CCHHHHHHHHHhccCCCeEEEEEecccCCCCcC-CHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCC
Confidence 6 4899999999743234666666656 4578887 79999999999999999999974322110 000
Q ss_pred CccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHH
Q 001531 780 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 859 (1058)
Q Consensus 780 g~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~ 859 (1058)
....-+|+..++||+|+. +| |++..++++.+.+-... +....+. .. +...++++.+.
T Consensus 226 ~~~~~~i~~~s~sK~~~~------~G-g~~~~~~~~~~~~~~~~-----------~~~~~~~-~~----~~~~~aa~~aa 282 (385)
T PRK05958 226 AGEPDVILVGTLGKALGS------SG-AAVLGSETLIDYLINRA-----------RPFIFTT-AL----PPAQAAAARAA 282 (385)
T ss_pred CCCCceEEEEechhhccc------CC-cEEEcCHHHHHHHHHhC-----------ccceecC-CC----CHHHHHHHHHH
Confidence 111234778889999852 23 67777765544321000 0000000 11 11222233344
Q ss_pred HHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCC
Q 001531 860 IAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS 938 (1058)
Q Consensus 860 l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~ 938 (1058)
+..+... .+..++...+++++.+.|++. +++. .+.+.+ +.+.++. +.+..++.++|.++||.+....
T Consensus 283 l~~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~~~~---~~~~~~~-----~~~~~~~~~~l~~~gI~v~~~~ 350 (385)
T PRK05958 283 LRILRRE--PERRERLAALIARLRAGLRALGFQLM--DSQSAI---QPLIVGD-----NERALALAAALQEQGFWVGAIR 350 (385)
T ss_pred HHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCcC--CCCCCE---EEEEeCC-----HHHHHHHHHHHHHCCceEeccc
Confidence 4444322 345566778888999999875 4432 122322 3444431 2356789999999999975432
Q ss_pred CC----CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001531 939 WP----VPGTLMIEPTESESKEELDRYCDALISI 968 (1058)
Q Consensus 939 ~p----~~~~Lris~te~~t~eeid~fi~aL~~i 968 (1058)
.+ ..+.+||++...++++|+|++++.|+++
T Consensus 351 ~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 351 PPTVPAGTSRLRITLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred CCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhc
Confidence 22 1368999999888999999999999875
No 169
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.72 E-value=1.2e-15 Score=178.51 Aligned_cols=278 Identities=16% Similarity=0.177 Sum_probs=185.9
Q ss_pred HHhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEE
Q 001531 204 EIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKV 283 (1058)
Q Consensus 204 e~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v 283 (1058)
+..+|..+...++++.+++++|.+ +..++.+|+.+..+++.++ . ++||+|++++..|+++...++. .|.++
T Consensus 80 ~~~~G~~~l~~~l~~~la~~~g~~--~~i~~tsG~~a~~~~~~~l-~--~~gd~vi~~~~~~~~~~~~~~~----~~~~~ 150 (397)
T PRK06939 80 RFICGTQDLHKELEEKLAKFLGTE--DAILYSSCFDANGGLFETL-L--GKEDAIISDALNHASIIDGVRL----CKAKR 150 (397)
T ss_pred ccccCCcHHHHHHHHHHHHHhCCC--cEEEEcChHHHHHHHHHHh-C--CCCCEEEEEhhhhHHHHHHHHh----cCCce
Confidence 356787788888999999999976 3456666777777776665 2 3899999999999999887753 24444
Q ss_pred EEe---Cchhhhc-cC----C--CEeEEEEEc-CCCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCC-------
Q 001531 284 VVS---DLKDIDY-KS----G--DVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPG------- 345 (1058)
Q Consensus 284 ~~v---~~~~l~~-l~----~--~t~~V~v~~-pn~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~------- 345 (1058)
+.+ +++++++ ++ + ++++|++.. -|.+|.+.|+++|.++|+++|+++++| +..+.+.+...+
T Consensus 151 ~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~D-e~~~~g~~~~~~~~~~~~~ 229 (397)
T PRK06939 151 YRYANNDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVD-DSHAVGFVGENGRGTVEHF 229 (397)
T ss_pred EEeCCCCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEE-CcccccCcCCCCCCHHHHc
Confidence 444 5556655 43 3 566666654 367899999999999999999999994 455555432211
Q ss_pred --cccceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccc
Q 001531 346 --ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICT 422 (1058)
Q Consensus 346 --~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t 422 (1058)
..++||+++|. |.|++ +..|++++++++++.+-.. ... +.+ . +.+.
T Consensus 230 ~~~~~~~i~~~S~sK~~~g------~r~G~v~~~~~~~~~l~~~---------~~~-~~~-------------~--~~~~ 278 (397)
T PRK06939 230 GVMDRVDIITGTLGKALGG------ASGGYTAGRKEVIDWLRQR---------SRP-YLF-------------S--NSLA 278 (397)
T ss_pred CCCCCCcEEEEECHHHhCc------cCceEEEeCHHHHHHHHHh---------Ccc-ccc-------------c--CCCC
Confidence 12579999997 88742 2348999888877665100 000 000 0 1111
Q ss_pred hhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC---HHHHHHHHHHcCcee
Q 001531 423 AQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNL 499 (1058)
Q Consensus 423 ~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~---~~~l~~~L~~~GI~~ 499 (1058)
.+...+..+++ .++. + .+++.++..++.+++++.|+++| +++... ....+.+..+. ..++.+.|.++||.+
T Consensus 279 ~~~~~a~~~al--~~~~-~-~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~gI~v 352 (397)
T PRK06939 279 PAIVAASIKVL--ELLE-E-SDELRDRLWENARYFREGMTAAG-FTLGPG-EHPIIPVMLGDAKLAQEFADRLLEEGVYV 352 (397)
T ss_pred HHHHHHHHHHH--HHHh-c-CHHHHHHHHHHHHHHHHHHHHcC-CCcCCC-CCCEEEEEECCHHHHHHHHHHHHHCCceE
Confidence 22222333333 3332 2 25677888899999999999887 765432 11123233332 678999999999987
Q ss_pred eec-------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001531 500 RVV-------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 500 ~~~-------~~~~lris~~~~~t~edid~ll~al~ 528 (1058)
... ..+.+|++++.+++++|++++++.|.
T Consensus 353 ~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~ 388 (397)
T PRK06939 353 IGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFE 388 (397)
T ss_pred eeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHH
Confidence 432 12579999999999999999999986
No 170
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.71 E-value=3.2e-15 Score=177.43 Aligned_cols=338 Identities=14% Similarity=0.147 Sum_probs=213.6
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCC-ceeeecCchHHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRA 670 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~-~~~l~~~sGa~ge~a~llair~ 670 (1058)
..+|++.+.+..++..+. ....+.....+. .+...++.+.|+++++.+ ...++.++|++++++++..+|.
T Consensus 66 ~~lGh~~p~v~~Ai~~ql-~~~~~~~~~~~~--------~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKlA~~ 136 (453)
T PRK06943 66 NLFGHANPRINAALKDQL-DTLEHAMLAGCT--------HEPAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFH 136 (453)
T ss_pred hcCCCCCHHHHHHHHHHH-HhcCCccccccC--------CHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHHH
Confidence 357888877776666652 222111110011 123447888999988743 2346788999999888888887
Q ss_pred HHHHcCCCCCCEEE-EcCCCCCccHHHHHhCCc------------EEEEEcCCCC-C-----------CCCHHHHHHHHH
Q 001531 671 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAK-G-----------NINIEELRKAAE 725 (1058)
Q Consensus 671 y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G~------------~vv~V~~d~~-g-----------~iD~e~L~~~i~ 725 (1058)
|...+|..+|.+|| ...++||..-.+....|- .+..++.... + .-|++++++.++
T Consensus 137 ~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~ 216 (453)
T PRK06943 137 AWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFA 216 (453)
T ss_pred HHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHH
Confidence 76556654566666 467899977554332221 1333443211 1 124678888887
Q ss_pred hcCCCeEEEEEEc--CCCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc------C--CcEEEeCCc
Q 001531 726 ANRDNLSTLMVTY--PSTHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNLH 792 (1058)
Q Consensus 726 ~~~~~taaV~vt~--Pn~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~------G--aDi~~~s~h 792 (1058)
++.+++++|+++. ....|++.+ .++++.++|++||+++|+|++ +.|+.+.|.+ | +|++++ .
T Consensus 217 ~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV----~TG~GRtG~~fa~~~~gv~PDivt~--g 290 (453)
T PRK06943 217 ERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEI----AVGCGRTGTFFACEQAGVWPDFLCL--S 290 (453)
T ss_pred hCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeech----hhCCCCCcchhHHHhCCCCCCeEee--e
Confidence 7778999999986 245676542 589999999999999999998 5677777753 3 699887 4
Q ss_pred cccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHH
Q 001531 793 KTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEAS 872 (1058)
Q Consensus 793 Ktf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a 872 (1058)
|.++ +|--.+|.+++++++.+.+.... .... ....+++.|+++.++++.+.|..+-++++-+.
T Consensus 291 Kgl~----gG~~Pi~av~~~~ei~~~~~~~~-----------~~~~-~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~- 353 (453)
T PRK06943 291 KGIS----GGYLPLSLVLSRDAIFAAFYDDD-----------VTRG-FLHSHSYTGNPLACRAALATLDLFAEDDVLAR- 353 (453)
T ss_pred hhhc----cCcccceEEEEcHHHHHhhcccC-----------ccCC-ccCCCCCCCCHHHHHHHHHHHHHHHhcCHHHH-
Confidence 7663 33223677778877765442110 0000 01112245678888888899998877775443
Q ss_pred HHHHHHHHHHHHHHhcc--CCee--eccCCCccceEEEEecccccccCCC-CHHHHHHHHHHCCccccCCCCCCCCEEEE
Q 001531 873 KIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTAGI-EPEDVAKRLMDYGFHGPTMSWPVPGTLMI 947 (1058)
Q Consensus 873 ~~~~~~a~yL~~~L~~~--~~v~--~~g~~~~~~~e~vv~~~~~~~~~g~-~~~~v~k~L~~~Gi~~~~~~~p~~~~Lri 947 (1058)
.....++|.++|+++ +..+ ..|. |. + +.+.+..-. .... ....+.+++.++|+.+... .+.++|
T Consensus 354 --~~~~G~~l~~~L~~l~~~~~v~~vrG~-Gl-~--~gvel~~~~-~~~~~~~~~i~~~~~~~Gll~~~~----g~~l~~ 422 (453)
T PRK06943 354 --NARKSARLRAALAPLAAHPQVRHLRQR-GT-I--FAFDVALDG-DAARTFSRRFFEAALERELLLRPI----GTTVYL 422 (453)
T ss_pred --HHHHHHHHHHHHHHHhcCCCEEeEecc-cc-E--EEEEEccCC-CcchHHHHHHHHHHHHCCcEEEec----CCEEEE
Confidence 335567888888764 2211 2231 32 2 122221000 0011 1456888899999987432 367999
Q ss_pred EcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 948 EPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 948 s~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
+|+...|++|||+++++|.+++.++
T Consensus 423 ~Ppl~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 423 MPPYVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred eCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998876
No 171
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.71 E-value=3e-15 Score=159.80 Aligned_cols=325 Identities=17% Similarity=0.158 Sum_probs=215.9
Q ss_pred cccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCC-cceEeecchHHHHHHHHHH
Q 001531 169 SFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPM-SNASLLDEGTAAAEAMAMC 247 (1058)
Q Consensus 169 ~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~-anasl~~~~Taa~ea~~~a 247 (1058)
..+|.| |.-+|..|.++ .+++- .+-..||+.|=.-+.+. -+--.+.... ....+-.+|+.++|+++..
T Consensus 19 ~L~gPG--Psnl~~~V~~A-~~~~~----lgh~sPe~~qIm~~v~e----gikyVFkT~n~~tf~isgsGh~g~E~al~N 87 (385)
T KOG2862|consen 19 TLLGPG--PSNLSGRVQEA-MSRPS----LGHMSPEFVQIMDEVLE----GIKYVFKTANAQTFVISGSGHSGWEAALVN 87 (385)
T ss_pred eeecCC--CcCCCHHHHHh-hcCCc----cccCCHHHHHHHHHHHH----HHHHHhccCCCceEEEecCCcchHHHHHHh
Confidence 367888 56688888744 44443 12235565443323222 2323333221 2244557889999998866
Q ss_pred hccccCCCCEEEEc-CCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cC-CCEeEEEEEcC-CCceeecc-
Q 001531 248 NNIQKGKKKTFIIA-SNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS-GDVCGVLVQYP-GTEGEVLD- 314 (1058)
Q Consensus 248 ~~~~~~~gd~Vlv~-~~~Hps~~~~~~~~a~~~gi~v~~v~~--------~~l~~-l~-~~t~~V~v~~p-n~~G~i~d- 314 (1058)
+- .+||+|++- .+.+.+...-+ ++++|++|.+++. +++.+ +. ...++|+|++. +.+|+++|
T Consensus 88 ~l---ePgd~vLv~~~G~wg~ra~D~---~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~ 161 (385)
T KOG2862|consen 88 LL---EPGDNVLVVSTGTWGQRAADC---ARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDL 161 (385)
T ss_pred hc---CCCCeEEEEEechHHHHHHHH---HHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCccccccchH
Confidence 52 289988755 45665444333 4567888887653 34544 43 45678888876 78999999
Q ss_pred HHHHHHHHHhcCcEEEEEeccccccCCC-CCCcccceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeee
Q 001531 315 YGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSI 392 (1058)
Q Consensus 315 l~~I~~~a~~~galliV~a~~~slg~l~-~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~ 392 (1058)
++.+.++||+++++++|++ ..|+|... .-.+||+|++-..+ |.++.| ||++++..+++....+-.|--
T Consensus 162 ~~~~g~lc~k~~~lllVD~-VaSlggt~F~mDewgVDvaytgSQKaL~aP-----~GLsiisfS~ka~~~~~~rK~---- 231 (385)
T KOG2862|consen 162 LAISGELCHKHEALLLVDT-VASLGGTEFEMDEWGVDVAYTGSQKALGAP-----AGLSIISFSDKALEAIRDRKT---- 231 (385)
T ss_pred HHHHHHHhhcCCeEEEEec-hhhcCCccceehhhcccEEEecchhhcCCC-----CCcceeecCHHHHHHHhhccC----
Confidence 7888999999999999954 45777653 34799999998888 888877 578899999888777743321
Q ss_pred cCCCCcceeeeccccccc------ccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCC
Q 001531 393 DSSGKPALRVAMQTREQH------IRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGT 466 (1058)
Q Consensus 393 d~~g~~~~~l~lqtreq~------irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~ 466 (1058)
+.-.|+++...+-+. -|+...|..+ |.++++.+|+ +.+-++||+++.+|+.+++++++..|+++|
T Consensus 232 ---~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv---~lly~Lr~AL--~~I~eeGL~~~~~rH~e~s~~l~~~l~~~G- 302 (385)
T KOG2862|consen 232 ---KPVSFYFDILRLGNFWGCDGEPRAYHHTPPV---QLLYSLRAAL--ALIAEEGLENSWRRHREMSKWLKLSLEALG- 302 (385)
T ss_pred ---CceEEEEeHHhhcchhccCCcccccccCCcH---HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-
Confidence 112244432222111 1455566666 8999999997 778899999999999999999999999998
Q ss_pred eEEcC---CCCccEE-EEecCC---HHHHHHHHHHc-Cceee----eccCCeEEEEecc-CCCHHHHHHHHHHHhC
Q 001531 467 VEVQG---LPFFDTV-KVKCAD---AHAIASAAYKI-EMNLR----VVDSNTVTASFDE-TTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 467 ~~l~~---~~~~~~v-~i~~~~---~~~l~~~L~~~-GI~~~----~~~~~~lris~~~-~~t~edid~ll~al~~ 529 (1058)
+++.. ....+++ ++.++. ..+++..+..+ ++.+. ...+..+||.+.- .-+.+-|+..++.|+.
T Consensus 303 Lq~fv~~e~~rlptvttv~vp~gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~ 378 (385)
T KOG2862|consen 303 LQLFVVDEELRLPTVTTVKVPYGVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKL 378 (385)
T ss_pred ccceecChhhccCcceeeecCCCCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHH
Confidence 88762 1233332 233332 67888888776 55542 3345668888754 5567778888877753
No 172
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.71 E-value=1.9e-15 Score=176.29 Aligned_cols=298 Identities=16% Similarity=0.218 Sum_probs=186.8
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCC--
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-- 711 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~-- 711 (1058)
..++++++++++|++...+..++|++. +..++++.+. .++++|++++..+..+...+...|.+++.++++.
T Consensus 68 ~~~lr~~ia~~l~~~~~~v~~~~g~t~--al~~~~~~~~-----~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~ 140 (380)
T PRK06225 68 FPELRELILKDLGLDDDEALITAGATE--SLYLVMRAFL-----SPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEE 140 (380)
T ss_pred hHHHHHHHHHhcCCCCCcEEEeCCHHH--HHHHHHHHhc-----CCCCEEEEcCCCCcchHHHHHHhCceEEeecccccc
Confidence 446888999999988655444444431 3333444331 2457899988877666667788999999999743
Q ss_pred -CCCCCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCc--cCCc
Q 001531 712 -KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY--IGAD 785 (1058)
Q Consensus 712 -~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~--~GaD 785 (1058)
++.+|+++++++++ +++++|++++|+ .+|.+- +++++|+++|+++|+++++|+++.--..+...... ....
T Consensus 141 ~~~~~d~~~l~~~~~---~~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 217 (380)
T PRK06225 141 CNYKLTPELVKENMD---ENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHT 217 (380)
T ss_pred CCccCCHHHHHhhcC---CCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCCE
Confidence 25799999999986 788999989985 688863 36999999999999999999985210011111111 1234
Q ss_pred EEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHch
Q 001531 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1058)
Q Consensus 786 i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1058)
++..+++|+|+. .|.++|++++++++.+.+.... ....+.+. ....++.+.+.. ..
T Consensus 218 i~~~s~SK~~g~----~G~RiG~i~~~~~l~~~~~~~~---------------~~~~~~~~----~~~~~a~~~l~~-~~ 273 (380)
T PRK06225 218 VTSYSFSKIFGM----AGLRIGAVVATPDLIEVVKSIV---------------INDLGTNV----IAQEAAIAGLKV-KD 273 (380)
T ss_pred EEEeechhhcCC----ccceeEEEecCHHHHHHHHHHH---------------hcccCCCH----HHHHHHHHHHhc-ch
Confidence 667788898853 3677999999877665432110 00111111 111122222222 11
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCC-C-C-
Q 001531 866 KGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-W-P- 940 (1058)
Q Consensus 866 eGl~~~a~~~~~~a~yL~~~L~~~--~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~-~-p- 940 (1058)
+-+++..+....+.+++.+.|+++ ..+....+.+ . -++++++. .+.+..++.++|.++||.+.... | +
T Consensus 274 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g-~--~~~~~~~~----~~~~~~~l~~~l~~~gi~v~~g~~~~~~ 346 (380)
T PRK06225 274 EWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHG-N--MMVIDISE----AGIDPEDLVEYLLERKIFVRQGTYTSKR 346 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCC-e--EEEEEccc----ccCCHHHHHHHHHHCCEEEcCCcccCcC
Confidence 222333333345566777788763 2221111112 2 24566542 24578899999999999864322 1 1
Q ss_pred -CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001531 941 -VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1058)
Q Consensus 941 -~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~~ 974 (1058)
..+.+|+++. .+++++++++++|++++++++.
T Consensus 347 ~~~~~iR~s~~--~~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 347 FGDRYIRVSFS--IPREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred CCCceEEEEeC--CCHHHHHHHHHHHHHHHHHhhc
Confidence 1468999985 4689999999999999988774
No 173
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.71 E-value=1.5e-15 Score=175.03 Aligned_cols=288 Identities=15% Similarity=0.175 Sum_probs=185.2
Q ss_pred cHHHHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEc
Q 001531 629 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (1058)
Q Consensus 629 G~~~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~ 708 (1058)
|......++++.+++++|.+. .+..++|+++.++ +++.+. +++++|+++...|+.+...+.+.|.+++.++
T Consensus 58 g~~~~~~~l~~~la~~~~~~~-~i~~~~G~~~~~~---~l~~~~-----~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~ 128 (360)
T TIGR00858 58 GNSPLHEELEEELAEWKGTEA-ALLFSSGYLANVG---VISALV-----GKGDLILSDALNHASLIDGCRLSGARVRRYR 128 (360)
T ss_pred CCcHHHHHHHHHHHHHhCCCC-EEEECchHHHHHH---HHHHhC-----CCCCEEEEEccccHHHHHHHHhcCCceEEec
Confidence 333456678899999998654 4666677655433 333331 2567899998888777777888999998887
Q ss_pred CCCCCCCCHHHHHHHHHhcC-CCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcC-CC-----C
Q 001531 709 TDAKGNINIEELRKAAEANR-DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SP-----G 780 (1058)
Q Consensus 709 ~d~~g~iD~e~L~~~i~~~~-~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~-~p-----g 780 (1058)
. +|+++|+++++++. +++++|++.+++ .+|... ++++|.++|+++|+++++|+++.....+.. .+ +
T Consensus 129 ~-----~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~-~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 202 (360)
T TIGR00858 129 H-----NDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIA-PLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFG 202 (360)
T ss_pred C-----CCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCc-CHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcC
Confidence 5 69999999997532 357888877774 678887 799999999999999999999753211111 00 0
Q ss_pred --ccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHH
Q 001531 781 --YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYT 858 (1058)
Q Consensus 781 --~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a 858 (1058)
..+.||+..++||+|+. +| |+++.++++.+.+.... .... .....++ ..++++.+
T Consensus 203 ~~~~~~~i~i~s~sK~~~~------~g-G~~~~~~~~~~~~~~~~-----------~~~~-~~~~~~~----~~~~a~~~ 259 (360)
T TIGR00858 203 LKPEPVDIQVGTLSKALGS------YG-AYVAGSQALIDYLINRA-----------RTLI-FSTALPP----AVAAAALA 259 (360)
T ss_pred CCccCCcEEEEechhhhhc------cC-cEEEcCHHHHHHHHHhC-----------ccce-ecCCCCH----HHHHHHHH
Confidence 13678999999999853 33 78887766554331000 0000 0001111 11122223
Q ss_pred HHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCC
Q 001531 859 YIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 937 (1058)
Q Consensus 859 ~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~ 937 (1058)
.+..+.. ..+..++...+.+++.+.|++. +.+. .+.+. -+++.++. +.+..++.++|.++||.+...
T Consensus 260 al~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~~~---~~~~~~~~-----~~~~~~~~~~l~~~gI~v~~~ 327 (360)
T TIGR00858 260 ALELIQE--EPWRREKLLALIARLRAGLEALGFTLM--PSCTP---IVPVIIGD-----NASALALAEELQQQGIFVGAI 327 (360)
T ss_pred HHHHHhh--CHHHHHHHHHHHHHHHHHHHHcCCccC--CCCCC---EEEEEeCC-----HHHHHHHHHHHHHCCeeEeee
Confidence 3332221 2345566778889999999875 3332 11122 24455431 234678999999999987432
Q ss_pred CC---C-CCCEEEEEcCCCCCHHHHHHHHHHHH
Q 001531 938 SW---P-VPGTLMIEPTESESKEELDRYCDALI 966 (1058)
Q Consensus 938 ~~---p-~~~~Lris~te~~t~eeid~fi~aL~ 966 (1058)
.+ + ..+.+||+++..++++|+++++++|+
T Consensus 328 ~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 328 RPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred CCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 22 1 23589999999999999999999873
No 174
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.71 E-value=9.9e-17 Score=184.64 Aligned_cols=288 Identities=22% Similarity=0.251 Sum_probs=181.0
Q ss_pred HHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCC
Q 001531 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1058)
Q Consensus 633 ~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~ 712 (1058)
.+.|.|+.+++++|.+.+.+..|++++|+.++++++. +++++||++++.|.+.-..+.+.|+++++++...+
T Consensus 67 ~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~--------~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~ 138 (417)
T PF01276_consen 67 IIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALC--------RPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDN 138 (417)
T ss_dssp HHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHT--------TTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-
T ss_pred HHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhc--------CCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCcc
Confidence 3779999999999999988889988889988877764 36789999999998888889999999999976422
Q ss_pred -----CCCCH-----HHHHHHHHhcCCCeE---EEEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcC--
Q 001531 713 -----GNINI-----EELRKAAEANRDNLS---TLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-- 777 (1058)
Q Consensus 713 -----g~iD~-----e~L~~~i~~~~~~ta---aV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~-- 777 (1058)
+.+++ +.++++|+++ ++.+ +|++++|+|.|++- |+++|+++||++|..|+||+|+..-+ +|.
T Consensus 139 ~~gi~~~i~~~~~~~~~i~~~l~~~-p~~k~~~~vvlt~PTY~Gv~~-di~~I~~~~h~~~~~llvDEAhGah~-~F~~l 215 (417)
T PF01276_consen 139 EYGIIGGISPDEFNEEDIEEALKEH-PDAKAPRLVVLTSPTYYGVCY-DIKEIAEICHKHGIPLLVDEAHGAHF-GFHPL 215 (417)
T ss_dssp TTS-BEEB-GGGGSHHHHHHHHHHC-TTCHCESEEEEESS-TTSEEE--HHHHHHHHCCTECEEEEE-TT-TTG-GCSGG
T ss_pred ccCCccCCChhhhhHHHHHHHHHhC-ccccCceEEEEeCCCCCeEEE-CHHHHHHHhcccCCEEEEEccccccc-cCCCC
Confidence 35677 9999999986 4444 49999999999998 89999999999999999999974322 222
Q ss_pred --CCCccCCc-------EEEeCCccccccCCCCCCCceeEEEEeCCC-CCCCCCCCcccCCCCCCCCCCCCCCCC-Cccc
Q 001531 778 --SPGYIGAD-------VCHLNLHKTFCIPHGGGGPGMGPIGVKKHL-APFLPSHPVVSTGGIPAPEKSQPLGTI-AAAP 846 (1058)
Q Consensus 778 --~pg~~GaD-------i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l-~~~lpg~~vg~~~d~g~~~~~~~t~~i-~sa~ 846 (1058)
..-.+|+| +++.|.||+++. --..++|.++... +.. ..+. ....-. +|+|
T Consensus 216 p~~a~~~gad~~~~~~~~vvqS~HKtL~a-----ltQts~lh~~~~~~v~~---~~~~-----------~~l~~~~TTSP 276 (417)
T PF01276_consen 216 PRSALALGADRPNDPGIIVVQSTHKTLPA-----LTQTSMLHVKGDRIVDH---ERVN-----------EALSMHQTTSP 276 (417)
T ss_dssp GTTCSSTTSS-CTSBEEEEEEEHHHHSSS------TT-EEEEEETCCCTTH---HHHH-----------HHHHHHS-SS-
T ss_pred ccchhhccCccccccceeeeechhhcccc-----cccceEEEecCCCcccH---HHHH-----------HHHHHHcCCCh
Confidence 12357999 999999999852 2256788887653 211 0000 000000 1111
Q ss_pred hhhHHHHHHHHHHHHHH-chhhHHHHHHHHHHHHHHHHHHHh---cc--CCee----eccCC------Cccce-------
Q 001531 847 WGSALILPISYTYIAMM-GSKGLTEASKIAILNANYMAKRLE---KH--YPIL----FRGVN------GTVAH------- 903 (1058)
Q Consensus 847 ~g~~~~~~~a~a~l~~l-G~eGl~~~a~~~~~~a~yL~~~L~---~~--~~v~----~~g~~------~~~~~------- 903 (1058)
+..+++..-....+| +.+| ++..++.++++.+++++|+ ++ +.+. ..++. +...|
T Consensus 277 --SY~lmASlD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~~ 353 (417)
T PF01276_consen 277 --SYPLMASLDVARAQMEEEEG-RELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGLAD 353 (417)
T ss_dssp ---HHHHHHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-TTT--TT--T
T ss_pred --HHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccccchhchhccc
Confidence 233333222333445 4555 4466777888999999993 33 3322 11110 00011
Q ss_pred -EE-------EEecccc-----cccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHH
Q 001531 904 -EF-------IVDLRGL-----KNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKE 956 (1058)
Q Consensus 904 -e~-------vv~~~~~-----~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~e 956 (1058)
.+ ++.++.+ ..+.|+++..+.+.|.++||.+...+ ..++.+-+|...|++
T Consensus 354 ~~~~lDP~K~ti~~pG~~~~g~~~~~Gi~g~~~~~~L~~~~I~~Ek~d---~~~vL~l~t~G~t~~ 416 (417)
T PF01276_consen 354 DYYMLDPTKLTINTPGIDADGELSELGIPGYIVEKYLREHGIQVEKTD---LYNVLFLFTIGDTKE 416 (417)
T ss_dssp TSEEE-TTEEEEE-STBETTSSB-SS---HHHHHHHHHHTTEE-SEEE---SSEEEEE--TTS-HH
T ss_pred CccccCCcEEEEEccCcCcCCcccccCCCHHHHHHHHHHcCCEEEecc---CccEEEEecCCCCCC
Confidence 12 2333211 02457899999999999999886544 367777777777664
No 175
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.71 E-value=1.4e-15 Score=177.40 Aligned_cols=272 Identities=20% Similarity=0.148 Sum_probs=187.0
Q ss_pred HHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---hh
Q 001531 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1058)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~---~~ 290 (1058)
.++++.+|+++|.+. +.++.+|++++.++++++ . ++||+||++...|+.+...+...++..|+++.+++. ++
T Consensus 64 ~~Le~~lA~l~G~~~--al~~~sG~~Ai~~~l~al-~--~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~d~~~ 138 (386)
T PRK06767 64 KLFEERMAVLEGGEE--ALAFGSGMAAISATLIGF-L--KAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDMETEAD 138 (386)
T ss_pred HHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-h--CCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCCCHHH
Confidence 356789999999764 778899998887777776 2 389999999999999988887767778999888765 45
Q ss_pred hhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCCC
Q 001531 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1058)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~GG 367 (1058)
+++ ++++|++|++.+| |.+|.+.|+++|.++||++|++++|| +.++.+....|.++|+|+++.|. |.|+++ |+
T Consensus 139 l~~~i~~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD-~a~a~~~~~~pl~~g~Div~~S~sK~l~g~---g~ 214 (386)
T PRK06767 139 IENKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVD-NTFCSPYLQRPLELGCDAVVHSATKYIGGH---GD 214 (386)
T ss_pred HHHhhCcCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhcCCcEEEecCcceecCC---CC
Confidence 555 7788999999998 68999999999999999999999994 45566666667788999999998 887643 43
Q ss_pred CceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHH
Q 001531 368 PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIA 447 (1058)
Q Consensus 368 P~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia 447 (1058)
+-+|+++++++++.++-. ..++.-|+. .+++ .++ +...+-+-+..+.
T Consensus 215 ~~gG~v~~~~~~i~~~~~------------------------~~~~~~g~~----~~~~---~a~--l~~~~L~tl~~r~ 261 (386)
T PRK06767 215 VVAGVTICKTRALAEKIR------------------------PMRKDIGGI----MAPF---DAW--LLLRGLKTLAVRM 261 (386)
T ss_pred ceeEEEEeChHHHHHHHH------------------------HHHHHhCCC----CCHH---HHH--HHHcCCCcHHHHH
Confidence 446899988776543200 001111111 0111 122 2333444556666
Q ss_pred HHHHHHHHHHHHHHhcCCCeEEcC-C----------CCccEEEEecCC----HHHHHHHHHHcCceeee-----------
Q 001531 448 QRVHGLAGTFALGLKKLGTVEVQG-L----------PFFDTVKVKCAD----AHAIASAAYKIEMNLRV----------- 501 (1058)
Q Consensus 448 ~~~~~~a~~l~~~L~~~G~~~l~~-~----------~~~~~v~i~~~~----~~~l~~~L~~~GI~~~~----------- 501 (1058)
++.++++.++++.|+++++++.+. + ..-..|+|.+++ +.++.++|...++.++.
T Consensus 262 ~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~ 341 (386)
T PRK06767 262 DRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTETLIQHPA 341 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCCcCccccCCC
Confidence 788999999999999986576432 1 111346666643 56777877765553210
Q ss_pred ----------------ccCCeEEEEeccCCCHHHHHHHHHHH
Q 001531 502 ----------------VDSNTVTASFDETTTLEDVDKLFIVF 527 (1058)
Q Consensus 502 ----------------~~~~~lris~~~~~t~edid~ll~al 527 (1058)
+.++.||+|+.--+.++=+++|.++|
T Consensus 342 ~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al 383 (386)
T PRK06767 342 TMTHAAIPAELRQEMGIYDNLIRLSVGLESWEDIVSDLEQAL 383 (386)
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHH
Confidence 11356888888655444345555554
No 176
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.71 E-value=4e-15 Score=172.80 Aligned_cols=214 Identities=22% Similarity=0.189 Sum_probs=160.2
Q ss_pred HHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch--
Q 001531 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-- 289 (1058)
Q Consensus 212 ~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~-- 289 (1058)
...++++.+|+++|.+. +.++.+|++++.++++++. ++||+|+++...|..+...++..++..|+++++++.+
T Consensus 41 ~~~~le~~la~l~g~~~--a~~~~sG~~Ai~~~l~~l~---~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~ 115 (369)
T cd00614 41 TVDALEKKLAALEGGEA--ALAFSSGMAAISTVLLALL---KAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPDDP 115 (369)
T ss_pred hHHHHHHHHHHHHCCCC--EEEEcCHHHHHHHHHHHHc---CCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCCCCH
Confidence 44567789999999865 7788999999888887762 3799999999999998888776667789999998875
Q ss_pred -hhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCC
Q 001531 290 -DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 365 (1058)
Q Consensus 290 -~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~ 365 (1058)
++++ +++++++|++.+| |++|.+.|+++|+++||++|++++| ++.++.++...|.++|+|++++|. |.|+++
T Consensus 116 ~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~liv-D~t~~~~~~~~~~~~g~Divv~S~tK~l~g~--- 191 (369)
T cd00614 116 EALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVV-DNTFATPYLQRPLELGADIVVHSATKYIGGH--- 191 (369)
T ss_pred HHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEE-ECCCcchhcCChhhhCCcEEEeccceeccCC---
Confidence 4555 7778999999987 7899999999999999999999999 456777776677789999999998 877643
Q ss_pred CCCceEEEEEeh-hhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHH
Q 001531 366 GGPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 444 (1058)
Q Consensus 366 GGP~~G~l~~~~-~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~ 444 (1058)
|..-+|++.+++ ++.+++.. .++.-|+ .. ++. .++ +...+-+.+.
T Consensus 192 ~~~~gG~v~~~~~~l~~~l~~-------------------------~~~~~g~-~~---~p~---~a~--~~l~~l~tl~ 237 (369)
T cd00614 192 SDVIAGVVVGSGEALIQRLRF-------------------------LRLALGT-IL---SPF---DAW--LLLRGLKTLP 237 (369)
T ss_pred CCceEEEEEeCcHHHHHHHHH-------------------------HHHhhCC-CC---CHH---HHH--HHHcCCCCHH
Confidence 223468888876 66554410 0011111 11 111 121 2344446677
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeE
Q 001531 445 TIAQRVHGLAGTFALGLKKLGTVE 468 (1058)
Q Consensus 445 ~ia~~~~~~a~~l~~~L~~~G~~~ 468 (1058)
...++..+++.++++.|++.++++
T Consensus 238 ~r~~~~~~na~~la~~L~~~~~v~ 261 (369)
T cd00614 238 LRMERHSENALKVAEFLEKHPKVE 261 (369)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcc
Confidence 778888999999999999986453
No 177
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.71 E-value=2.7e-15 Score=176.67 Aligned_cols=328 Identities=16% Similarity=0.197 Sum_probs=212.2
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcCCcccc----cccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHH
Q 001531 139 MKFSKFDEGLTESQMIEHMQKLASMNKVYK----SFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLL 214 (1058)
Q Consensus 139 ~~lp~~~~~~sE~e~~~~~~~la~~n~~~~----~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~ 214 (1058)
-.+| +.++.+.+++.++..+..++..+. .+...+.-+..+|+...+.+... ..-..-.+..+.++.+.-.
T Consensus 31 ~~~p--~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~~~~----~~~nl~d~~~~p~a~~~E~ 104 (460)
T COG0076 31 RMAP--EKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELLVSA----LNKNLGDPDESPAAAELEE 104 (460)
T ss_pred ccCC--ccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHHHHH----HhhcCCCcccChhHHHHHH
Confidence 3455 578899999999999977775442 12334444555666665333321 0011112334556777777
Q ss_pred HHHHHHHHhcCC-CCcceEeecchHHHHHHHHHHhccc-c---C-------CCCEEEEcCCCCHHHHHHHHHhhcCCCeE
Q 001531 215 NFQTMIADLTGL-PMSNASLLDEGTAAAEAMAMCNNIQ-K---G-------KKKTFIIASNCHPQTIDICITRADGFDIK 282 (1058)
Q Consensus 215 e~q~~ia~L~G~-~~anasl~~~~Taa~ea~~~a~~~~-~---~-------~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~ 282 (1058)
+.-.|+++|+|. +.+...++.|||.++.-.+++.+.. + . ...+||+|...|.++.+.++. +|++
T Consensus 105 ~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~----lG~~ 180 (460)
T COG0076 105 RVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARY----LGLG 180 (460)
T ss_pred HHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHH----hCCC
Confidence 788899999999 4556778889997766444433321 0 0 122799999999999998754 3554
Q ss_pred EEEe---------Cchhhhc-cCCCEeE--EEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEecccccc--CCCCCCcc
Q 001531 283 VVVS---------DLKDIDY-KSGDVCG--VLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALT--ILKPPGEL 347 (1058)
Q Consensus 283 v~~v---------~~~~l~~-l~~~t~~--V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg--~l~~p~~~ 347 (1058)
.+.+ |+++|++ +++++.. |+.+.+ +.+|.++||++|+++|+++|++++|++-.-++- .....+.|
T Consensus 181 ~~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~ 260 (460)
T COG0076 181 LRRVPTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRW 260 (460)
T ss_pred ceeEEeccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccchh
Confidence 4443 2356666 7777776 777777 579999999999999999999999965221111 12223443
Q ss_pred -----cceEEEecC-cccccccCCCCCceEEEEEehh--hhhcCC--CcEEeeeecCCCCcceeeecccccccccccccC
Q 001531 348 -----GADIVVGSA-QRFGVPMGYGGPHAAFLATSQE--YKRMMP--GRIVGVSIDSSGKPALRVAMQTREQHIRRDKAT 417 (1058)
Q Consensus 348 -----GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~--~~~~lp--grivG~s~d~~g~~~~~l~lqtreq~irRekaT 417 (1058)
+||-++.++ |.+..|. ++|++.+|++ +.+.+- ..+.+.+ +.+.+.+.. +|
T Consensus 261 ~f~l~~vdSIt~d~HK~g~aP~-----~~G~il~rd~e~l~~~~~~~~~yl~~~----~~~~~ti~~-sr---------- 320 (460)
T COG0076 261 DFGLEGVDSITVDGHKYGLAPI-----GCGVVLFRDEEALRRILIFADYYLPGG----GIPNFTILG-SR---------- 320 (460)
T ss_pred hcCCCCceEEEECcccccCCCC-----CceEEEEECHHHhhhhhhcccccCCCC----CcCceeEee-cc----------
Confidence 789999999 5555575 4566777764 433321 1111100 112222211 11
Q ss_pred CCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC----HHHHHHHHH
Q 001531 418 SNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD----AHAIASAAY 493 (1058)
Q Consensus 418 sni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~----~~~l~~~L~ 493 (1058)
.+-.++..-.-+.++|.+|++++.+++.+++++|+++|++.|.++++++|..+.|+|+.++ ..+..+.+.
T Consensus 321 ------~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~~~~~~~~~~~~~~ 394 (460)
T COG0076 321 ------PGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKDDEDTLADLSERLD 394 (460)
T ss_pred ------chHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCCcccchhchHHHHH
Confidence 1111111111258999999999999999999999999999977999988888889998754 356667777
Q ss_pred HcCceeeec
Q 001531 494 KIEMNLRVV 502 (1058)
Q Consensus 494 ~~GI~~~~~ 502 (1058)
+.|+.+...
T Consensus 395 ~~gw~v~~~ 403 (460)
T COG0076 395 RRGWQVPAQ 403 (460)
T ss_pred hcCceeecc
Confidence 789987653
No 178
>PRK07678 aminotransferase; Validated
Probab=99.71 E-value=3.4e-15 Score=177.37 Aligned_cols=344 Identities=16% Similarity=0.184 Sum_probs=209.9
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY 671 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y 671 (1058)
..+|++.+.+..++..+. ....+.. ...+ .+...++.+.|+++++.....++.++|++++++++..+|.|
T Consensus 59 ~~lGh~~p~v~~ai~~q~-~~~~~~~--~~~~-------~~~~~~lae~l~~~~~~~~~v~f~~sGseA~e~AlklAr~~ 128 (451)
T PRK07678 59 VNVGYGRKELAEAAYEQL-KTLSYFP--LTQS-------HEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQY 128 (451)
T ss_pred hcCCCCCHHHHHHHHHHH-HhcCccc--cccC-------CHHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHH
Confidence 457888877776665552 2211111 1001 12244788899999876544577889999999999999998
Q ss_pred HHHcCCCCCCEEE-EcCCCCCccHHHHHhCCc------------EEEEEcCCCCCC---------CC---HHHHHHHHH-
Q 001531 672 HKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAKGN---------IN---IEELRKAAE- 725 (1058)
Q Consensus 672 ~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G~------------~vv~V~~d~~g~---------iD---~e~L~~~i~- 725 (1058)
...+|..+|.+|| +..++||....+....|. .+..++.....+ .| ++.+++.++
T Consensus 129 t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (451)
T PRK07678 129 HAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTW 208 (451)
T ss_pred HHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHh
Confidence 7655644556666 467899987665433221 123343321111 11 234666775
Q ss_pred hcCCCeEEEEEEcC-CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCc------cC--CcEEEeCCcc
Q 001531 726 ANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY------IG--ADVCHLNLHK 793 (1058)
Q Consensus 726 ~~~~~taaV~vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~------~G--aDi~~~s~hK 793 (1058)
.+.+++++|+++.- ...|++.+ .++++.++|++||+++|+|++ +.|+.+.|+ +| +|++++ .|
T Consensus 209 ~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV----~tGfGRtG~~~~~~~~gv~PDivt~--gK 282 (451)
T PRK07678 209 ELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEV----ICGFGRTGKAFGFMNYGVKPDIITM--AK 282 (451)
T ss_pred cCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeeh----hhcCCcCchhHHHHhcCCCCCEEEe--ec
Confidence 34578999988753 34566642 489999999999999999998 456666653 23 688876 47
Q ss_pred ccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHH
Q 001531 794 TFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASK 873 (1058)
Q Consensus 794 tf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~ 873 (1058)
.+ ++|+-.+|.+++++++++.+.... ..... ...+++.|+++.++++.+.|..+-++++.+
T Consensus 283 ~l----ggG~~Pi~av~~~~~i~~~~~~~~-----------~~~~~-~h~~T~~gnp~~~aaa~a~l~~l~~~~~~~--- 343 (451)
T PRK07678 283 GI----TSAYLPLSATAVKKEIYEAFKGKG-----------EYEHF-RHVNTFGGNPAACALALKNLEIMENENLIE--- 343 (451)
T ss_pred cc----ccCCcceeEEEEcHHHHHHHhccC-----------ccccc-ccCCCCCcCHHHHHHHHHHHHHHHhCCHHH---
Confidence 66 344323778888877765442110 00000 011235567888888888898887766543
Q ss_pred HHHHHHHHHHHHHhcc---CCee--eccCCCccceEEEEecccccccC--CCCHHHHHHHHHHCCccccCCC--CC-CCC
Q 001531 874 IAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTA--GIEPEDVAKRLMDYGFHGPTMS--WP-VPG 943 (1058)
Q Consensus 874 ~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~~~~~~--g~~~~~v~k~L~~~Gi~~~~~~--~p-~~~ 943 (1058)
+..+..++|.++|++. ++++ +.|. |.. .-+.+.-+...... .....++.+.|.++|+.+.... .| ..+
T Consensus 344 ~~~~~g~~l~~~l~~~~~~~~~v~~vrg~-Gl~-~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~ 421 (451)
T PRK07678 344 RSAQLGELLLEQLKEELGEHPLVGDIRGK-GLL-VGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNN 421 (451)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEEee-ceE-EEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeecCccccCCCC
Confidence 3445667788777643 2322 2231 322 11222100000000 0124678889999999874321 01 136
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 944 TLMIEPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 944 ~Lris~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
.||++|+..+|++|||+++++|.+++.++
T Consensus 422 ~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 422 VLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred EEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 89999999999999999999999988654
No 179
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.70 E-value=3.6e-15 Score=174.92 Aligned_cols=279 Identities=20% Similarity=0.265 Sum_probs=185.3
Q ss_pred HHHHHHHHHHhCCC--ceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCCc---------
Q 001531 635 NNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM--------- 702 (1058)
Q Consensus 635 ~el~~~lael~G~~--~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G~--------- 702 (1058)
.++.+++++++|.+ ...+..++|+++.++++.+++. .| +++|+ +..++||.........|.
T Consensus 88 ~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~----~g---~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 160 (398)
T PRK03244 88 IALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARL----TG---RTKIVAAEGGFHGRTMGALALTGQPAKRAPFEP 160 (398)
T ss_pred HHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHH----HC---CCeEEEECCCcCCccHHHHhccCCcccccCCCC
Confidence 37889999998854 2346677888877666655543 22 33455 445788877665544332
Q ss_pred ---EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccc---HHHHHHHHHHcCCEEEEeccCcccccC
Q 001531 703 ---KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVG 775 (1058)
Q Consensus 703 ---~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~d---I~eI~~lah~~g~lv~vD~a~~~al~g 775 (1058)
+++.+|. .|+++|+++++ +++++|+++.+ |.+|.+.++ +++|.++|++||+++++|+++. +
T Consensus 161 ~~~~~~~~~~-----~d~~~l~~~~~---~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~----g 228 (398)
T PRK03244 161 LPGGVEHVPY-----GDVDALAAAVD---DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQT----G 228 (398)
T ss_pred CCCCceEeCC-----CCHHHHHHhhc---CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc----C
Confidence 2333443 48999999885 68999999877 567887632 8999999999999999999963 2
Q ss_pred cCCCCc--------cCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccch
Q 001531 776 LTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPW 847 (1058)
Q Consensus 776 l~~pg~--------~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~ 847 (1058)
+.+.|. ...|++++ .|+|+ ||-++|++.+++++.+.+..... ... +.
T Consensus 229 ~gr~g~~~~~~~~~~~pDi~t~--sK~l~-----~G~~ig~~~~~~~~~~~~~~~~~--------------~~t----~~ 283 (398)
T PRK03244 229 IGRTGAWFAHQHDGVTPDVVTL--AKGLG-----GGLPIGACLAFGPAADLLTPGLH--------------GST----FG 283 (398)
T ss_pred CcccchHHhhhhhCCCCCEEEE--chhhh-----CCcccEEEEEcHHHHhhccCCCC--------------cCC----CC
Confidence 333331 23688765 58874 34568888888776654421100 011 22
Q ss_pred hhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCee--eccCCCccceEEEEecccccccCCCCHHHHH
Q 001531 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA 924 (1058)
Q Consensus 848 g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~--~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~ 924 (1058)
++++.++++.+++..+..+.+. ++..+..++|.+.|++. +++. +.| .+.+ +.+.++. ....++.
T Consensus 284 ~~~~~~aaa~a~l~~~~~~~~~---~~~~~~~~~l~~~L~~~~~~~~~~v~g-~g~~---~~i~~~~------~~~~~~~ 350 (398)
T PRK03244 284 GNPVACAAALAVLDTIASEGLL---ENAERLGEQLRAGIEALGHPLVDHVRG-RGLL---LGIVLTA------PVAKAVE 350 (398)
T ss_pred CCHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHhcCCCceeeEee-ccEE---EEEEEec------cHHHHHH
Confidence 3455566677777767655443 34456678899999874 3321 222 1211 3344321 1467899
Q ss_pred HHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001531 925 KRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1058)
Q Consensus 925 k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~ 973 (1058)
++|.++|+.+.... .+.||++|+..+|++|||+++++|++++.+++
T Consensus 351 ~~l~~~Gv~~~~~~---~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 351 AAAREAGFLVNAVA---PDVIRLAPPLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred HHHHHCCeEEeecC---CCEEEEECCCcCCHHHHHHHHHHHHHHHHhcc
Confidence 99999999875432 47899999999999999999999999987654
No 180
>PLN00175 aminotransferase family protein; Provisional
Probab=99.70 E-value=3e-15 Score=176.34 Aligned_cols=346 Identities=17% Similarity=0.169 Sum_probs=211.4
Q ss_pred HHHHHHHHhcCccCcCcccccccccccCCccccccccccccccc-ccCCCCchhhhhcHHHHHHHHHHHHHHHhCCC--c
Q 001531 573 LLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFA-NIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--S 649 (1058)
Q Consensus 573 ~~r~~~~l~~~~~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~-~~~P~~p~e~~qG~~~~~~el~~~lael~G~~--~ 649 (1058)
.++.+.+++.. .+++.|+.|.+.+++............. ..+.|.+ .+|..++...+.+++.+..|.+ .
T Consensus 43 ~~~~~~~~~~~-----~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~Lr~aia~~~~~~~g~~~~~ 114 (413)
T PLN00175 43 IFTQMSSLAIK-----HGAINLGQGFPNFDGPDFVKEAAIQAIRDGKNQYAR---GFGVPELNSAIAERFKKDTGLVVDP 114 (413)
T ss_pred HHHHHHHHhhc-----CCeEecCCCCCCCCCCHHHHHHHHHHHhcCCCCcCC---CCCCHHHHHHHHHHHHHHhCCCCCC
Confidence 34555555432 2467888887766543221111000000 1123333 4577777777777777776754 3
Q ss_pred e-eeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCC-CCCCCHHHHHHHHHhc
Q 001531 650 F-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KGNINIEELRKAAEAN 727 (1058)
Q Consensus 650 ~-~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~-~g~iD~e~L~~~i~~~ 727 (1058)
. .+..++|++. ++.++++.+. .++++|++++..|..+...+...|.+++.++.++ ++.+|+++|+++++
T Consensus 115 ~~~I~vt~G~~~--al~~~~~~l~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~-- 185 (413)
T PLN00175 115 EKEVTVTSGCTE--AIAATILGLI-----NPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFT-- 185 (413)
T ss_pred CCCEEEeCCHHH--HHHHHHHHhC-----CCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcC--
Confidence 2 3555566542 2233333321 3568899998877777777889999999999975 46899999999996
Q ss_pred CCCeEEEEEEcC-CCccccc--ccHHHHHHHHHHcCCEEEEeccCccc-ccC-c----CCCCccCCcEEEeCCccccccC
Q 001531 728 RDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG-L----TSPGYIGADVCHLNLHKTFCIP 798 (1058)
Q Consensus 728 ~~~taaV~vt~P-n~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~a-l~g-l----~~pg~~GaDi~~~s~hKtf~~P 798 (1058)
+++++|++++| |.+|.+- +++++|+++|+++|+++++|+++..- ..+ . ..++..+-.|++.++.|+|+.|
T Consensus 186 -~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~ 264 (413)
T PLN00175 186 -SKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLT 264 (413)
T ss_pred -cCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCc
Confidence 68899999999 4789874 35899999999999999999986421 111 0 0111123346778889998654
Q ss_pred CCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHH
Q 001531 799 HGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILN 878 (1058)
Q Consensus 799 ~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~ 878 (1058)
|.++|++.+++++...+-.. +.....+.+...|. ++..++. .+.+-+++..+....+
T Consensus 265 ----G~RiG~~v~~~~l~~~l~~~--------------~~~~~~~~s~~~Q~----a~~~~l~-~~~~~~~~~~~~~~~~ 321 (413)
T PLN00175 265 ----GWKIGWAIAPPHLTWGVRQA--------------HSFLTFATATPMQW----AAVAALR-APESYYEELKRDYSAK 321 (413)
T ss_pred ----chheeeeEeCHHHHHHHHHH--------------HhhccCCCCHHHHH----HHHHHHh-CCHHHHHHHHHHHHHH
Confidence 78899999987665443100 00011222111222 1222222 2333456666667778
Q ss_pred HHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCC-CHHHHHHHHH-HCCccc-cCCCC-C----CCCEEEEEc
Q 001531 879 ANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGI-EPEDVAKRLM-DYGFHG-PTMSW-P----VPGTLMIEP 949 (1058)
Q Consensus 879 a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~-~~~~v~k~L~-~~Gi~~-~~~~~-p----~~~~Lris~ 949 (1058)
++++.+.|++. +.+ ..+++.++ +++++.+ .+. +..++++.|. ++|+.+ |...| + ..+.+||++
T Consensus 322 ~~~l~~~L~~~g~~~--~~p~g~~f--~~~~~~~----~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~ 393 (413)
T PLN00175 322 KDILVEGLKEVGFKV--YPSSGTYF--VMVDHTP----FGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAF 393 (413)
T ss_pred HHHHHHHHHHCCCee--cCCCeeEE--EEEeccc----cCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEE
Confidence 88999999875 333 22333332 4556532 133 4678999887 569874 33223 1 246899999
Q ss_pred CCCCCHHHHHHHHHHHHHHH
Q 001531 950 TESESKEELDRYCDALISIR 969 (1058)
Q Consensus 950 te~~t~eeid~fi~aL~~i~ 969 (1058)
.. ++++++..++.|.+++
T Consensus 394 ~~--~~e~l~~~~~rL~~~~ 411 (413)
T PLN00175 394 CK--DEETLRAAVERMKTKL 411 (413)
T ss_pred cC--CHHHHHHHHHHHHHHH
Confidence 73 6888888888887664
No 181
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.70 E-value=1.2e-15 Score=178.47 Aligned_cols=273 Identities=14% Similarity=0.096 Sum_probs=178.5
Q ss_pred HHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccc--------------------------cC--CCCEEEEcCCCC--
Q 001531 216 FQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ--------------------------KG--KKKTFIIASNCH-- 265 (1058)
Q Consensus 216 ~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~--------------------------~~--~gd~Vlv~~~~H-- 265 (1058)
..+...+|+|++.+|+-.+ +|+.|+.++.+|+.-. |+ +||+|+.-+..|
T Consensus 100 ~~~ra~~lf~a~~anvqp~-Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GG 178 (493)
T PRK13580 100 AAEHAKELFGAEHAYVQPH-SGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGG 178 (493)
T ss_pred HHHHHHHHhCCCcccccCC-CcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCC
Confidence 4567888999999888766 4566667777766310 00 168888654333
Q ss_pred ------HHHHHHHHHhhcCCCeEEE--EeCchhhhc-cCCCEeEEEEEcCCCceeeccHHHHHHHHHhcCcEEEEEeccc
Q 001531 266 ------PQTIDICITRADGFDIKVV--VSDLKDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLL 336 (1058)
Q Consensus 266 ------ps~~~~~~~~a~~~gi~v~--~v~~~~l~~-l~~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~ 336 (1058)
+.+.......+..+|++-. .+|++++++ +.+.+..|++.+.+.+|.+.|+++|.++||++|++++|| +.+
T Consensus 179 Hlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~~~~~dl~~i~eia~~~gA~L~VD-~AH 257 (493)
T PRK13580 179 HLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAYPRRVNFAKLREIADEVGAVLMVD-MAH 257 (493)
T ss_pred eeecCcccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCccccCCCcCHHHHHHHHHHcCCEEEEE-Cch
Confidence 2223222122233444422 256677777 777888888877544466889999999999999999994 466
Q ss_pred cccCCCC---CC----cccceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeeccccc
Q 001531 337 ALTILKP---PG----ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTRE 408 (1058)
Q Consensus 337 slg~l~~---p~----~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtre 408 (1058)
++|++.- +. ..++||+++|+ |+|++ |..||+++++++.++|.
T Consensus 258 ~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~G------P~GG~I~~~~~l~~~L~------------------------ 307 (493)
T PRK13580 258 FAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRG------PRGGLVLAKKEYADAVD------------------------ 307 (493)
T ss_pred hhceeccccchhhcCCCCCCcEEEeCChhhccC------CCeEEEEecHHHHHHHh------------------------
Confidence 7776541 11 23799999998 87853 55589999998877661
Q ss_pred ccccccccCCCccchh---HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcC-CCCccEEEEecCC
Q 001531 409 QHIRRDKATSNICTAQ---ALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LPFFDTVKVKCAD 484 (1058)
Q Consensus 409 q~irRekaTsni~t~~---~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~-~~~~~~v~i~~~~ 484 (1058)
++.+.+.+.. ...|...++ ..+...+.++.++++.+++++|++.|.+.| ++++. ....+.+.|.+.+
T Consensus 308 ------~a~P~i~gg~l~p~iAA~avAl--~e~~~~ef~~y~~~l~~Na~~La~~L~~~G-~~vv~ggTdshIV~V~lg~ 378 (493)
T PRK13580 308 ------KGCPLVLGGPLPHVMAAKAVAL--AEARTPEFQKYAQQVVDNARALAEGFLKRG-ARLVTGGTDNHLVLIDVTS 378 (493)
T ss_pred ------hCCCcccCCCccHHHHHHHHHH--HHHhCccHHHHHHHHHHHHHHHHHHHHhcC-CCccCCCCCCCEEEEEeCC
Confidence 0001111111 222222222 233233457789999999999999999998 98863 2223455565543
Q ss_pred ---H-HHHHHHHHHcCceeeec----c------CCeEEEEeccCC----CHHHHHHHHHHHhC
Q 001531 485 ---A-HAIASAAYKIEMNLRVV----D------SNTVTASFDETT----TLEDVDKLFIVFAG 529 (1058)
Q Consensus 485 ---~-~~l~~~L~~~GI~~~~~----~------~~~lris~~~~~----t~edid~ll~al~~ 529 (1058)
+ ..+.+.|.+.||.+... + ...||+++++.+ +++|++++++.|..
T Consensus 379 ~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~ 441 (493)
T PRK13580 379 FGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVK 441 (493)
T ss_pred HHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHH
Confidence 3 46778999999987532 1 467999999944 69999999999963
No 182
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.70 E-value=1.9e-15 Score=173.67 Aligned_cols=340 Identities=16% Similarity=0.194 Sum_probs=221.0
Q ss_pred cccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhC---CCceeeecCchHHHHHHHHHHHH
Q 001531 593 PLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG---FDSFSLQPNAGAAGEYAGLMVIR 669 (1058)
Q Consensus 593 ~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G---~~~~~l~~~sGa~ge~a~llair 669 (1058)
..|+|...++.++..|... -.|+ +++.- .+ +--.+|.++|++++. ++. .|+.+|||.+.+.++.+++
T Consensus 57 ~~Gh~~~~i~~Ai~~Q~~~-l~~~--~~~~~----t~--~Pa~~LA~~L~~~aP~~~l~~-vFf~~sGSeAvEtAlKma~ 126 (449)
T COG0161 57 NHGHGRPEIAEAIKKQLDK-LPHV--MFGGF----TH--EPAIELAEKLAELAPEGGLDH-VFFTDSGSEAVETALKMAL 126 (449)
T ss_pred hcCcCCHHHHHHHHHHHHh-CCch--hhccc----CC--chHHHHHHHHHHhCCCCCccE-EEEeCCchHHHHHHHHHHH
Confidence 4688988888888887422 2222 22211 01 113488999999998 444 4778899999999999999
Q ss_pred HHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCC-------------cEEEEEcCCC------CCC------CCHHHHHHH
Q 001531 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG-------------MKIVSVGTDA------KGN------INIEELRKA 723 (1058)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G-------------~~vv~V~~d~------~g~------iD~e~L~~~ 723 (1058)
.|++.+|+++|.++| ...++||..-.++...| ..+..+|... ++. -+.++|+++
T Consensus 127 qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~ 206 (449)
T COG0161 127 QYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEAL 206 (449)
T ss_pred HHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHH
Confidence 999999987776666 46789997665543333 1233444321 121 236789999
Q ss_pred HHhcC-CCeEEEEEEcC--CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc--------CCcEEEe
Q 001531 724 AEANR-DNLSTLMVTYP--STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHL 789 (1058)
Q Consensus 724 i~~~~-~~taaV~vt~P--n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~--------GaDi~~~ 789 (1058)
|.+++ +++++++++.- ...|++.+ .++++.++|++||+++|+|++ ..||.+.|++ -+||++.
T Consensus 207 i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV----~tGFGRTG~~FA~e~~gi~PDi~~~ 282 (449)
T COG0161 207 ILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEV----ATGFGRTGKMFACEHAGIVPDILCL 282 (449)
T ss_pred HHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecc----eeCCCcCchhhhhhhcCCCCCeeee
Confidence 99888 45555555432 23677653 489999999999999999998 7788888863 3699887
Q ss_pred CCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHH
Q 001531 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1058)
Q Consensus 790 s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1058)
.|.++ +|--.+|.+.+++++.+.+-.... +.-..+.+ ..|+++.+++|.+.+..+-++++.
T Consensus 283 --aKGLT----~GY~Pl~a~l~~~~I~~~~~~~~~----------~~f~HG~T---YsghPlacAaAla~L~i~e~e~l~ 343 (449)
T COG0161 283 --AKGLT----GGYLPLSAVLTSDRIYEAFSDGDA----------GAFMHGHT---YSGNPLACAAALANLDILEEEDLL 343 (449)
T ss_pred --ccccc----ccchhhHhHhhhHHHHHHHhcccC----------CeeccCCc---cccCHHHHHHHHHHHHHHHhcCHH
Confidence 48774 222245555566555443211100 00111222 336888899999999999888877
Q ss_pred HHHHHHHHHHHHHHHHHhc-cC--Cee--eccCCCcc-ceEEEEecccccccC-CCCHHHHHHHHHHCCccccCCCCCCC
Q 001531 870 EASKIAILNANYMAKRLEK-HY--PIL--FRGVNGTV-AHEFIVDLRGLKNTA-GIEPEDVAKRLMDYGFHGPTMSWPVP 942 (1058)
Q Consensus 870 ~~a~~~~~~a~yL~~~L~~-~~--~v~--~~g~~~~~-~~e~vv~~~~~~~~~-g~~~~~v~k~L~~~Gi~~~~~~~p~~ 942 (1058)
+.++ ....||.++|++ .. +.+ ..+ .|.. .-|++-|..+- ... ..-...+.+.+.++|+.+..+ .
T Consensus 344 ~~~~---~~~~~l~~~L~~~l~~~p~VgdVR~-~Gli~~iElv~d~~t~-~~f~~~~~~~~~~~~~e~Gl~iRp~----g 414 (449)
T COG0161 344 ERVA---EIGAYLQAGLQAALADHPLVGDVRG-LGLIGAIELVADKATK-TPFEARVGARVRAAALERGLLIRPL----G 414 (449)
T ss_pred HHHH---HHHHHHHHHHHHhcccCCcEEEeec-cceEEEEEEecccccc-cchhhhHHHHHHHHHHHCCeEEeec----C
Confidence 6544 667889999986 22 121 111 1211 11332222100 000 001567888889999998643 5
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001531 943 GTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1058)
Q Consensus 943 ~~Lris~te~~t~eeid~fi~aL~~i~~e~~~ 974 (1058)
+.+.++|+...|++|||++++++++.+++...
T Consensus 415 ~~i~~~PPliit~~eid~l~~~l~~al~~~~~ 446 (449)
T COG0161 415 DVIYLMPPLIITREEIDELVDALREALDETLA 446 (449)
T ss_pred CEEEEcCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 79999999999999999999999999887654
No 183
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.70 E-value=4.2e-15 Score=174.47 Aligned_cols=296 Identities=12% Similarity=0.116 Sum_probs=189.4
Q ss_pred hcHHHHHHHHHHHHHHHhCC--Cc-eeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEE
Q 001531 628 QGYQEMFNNLGEWLCTITGF--DS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1058)
Q Consensus 628 qG~~~~~~el~~~lael~G~--~~-~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~v 704 (1058)
+|..++...+.+++.+..|. +. ..+..++|++. +..++++.+. .++++|+++...+..+...+...|+++
T Consensus 69 ~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~--al~~~~~~~~-----~~Gd~Vlv~~P~y~~~~~~~~~~G~~~ 141 (399)
T PRK07681 69 SGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQD--GLVHLPMVYA-----NPGDIILVPDPGYTAYETGIQMAGATS 141 (399)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHH--HHHHHHHHhC-----CCCCEEEECCCCccchHHHHHhcCCEE
Confidence 57666666666677666564 44 45666667653 2333333331 256899999988877777788999999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--ccHHHHHHHHHHcCCEEEEeccCcccc-cCcCC
Q 001531 705 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLTS 778 (1058)
Q Consensus 705 v~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~al-~gl~~ 778 (1058)
+.+|.+++ ..+|++++++++. +++++|++++| |.+|.+- +.+++|+++|+++|+++++|+++..-. .+-..
T Consensus 142 ~~v~~~~~~~~~~d~~~l~~~~~---~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~ 218 (399)
T PRK07681 142 YYMPLKKENDFLPDLELIPEEIA---DKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKP 218 (399)
T ss_pred EEEecCCCCCCcCCHHHHHHhcc---ccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCC
Confidence 99999765 3679999999886 68899999998 5789885 248899999999999999999864211 11100
Q ss_pred C------CccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHH
Q 001531 779 P------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1058)
Q Consensus 779 p------g~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~ 852 (1058)
+ +...-.|+..+++|+|+.| |.++|++.+++++...+-.. +.....+.+...+.
T Consensus 219 ~~~~~~~~~~~~~i~~~S~SK~~~~~----GlRiG~~i~~~~l~~~~~~~--------------~~~~~~~~s~~~q~-- 278 (399)
T PRK07681 219 ISFLSVPGAKEVGVEINSLSKSYSLA----GSRIGYMIGNEEIVRALTQF--------------KSNTDYGVFLPIQK-- 278 (399)
T ss_pred CChhhCCCCcccEEEEeecccccCCc----cceeEEEecCHHHHHHHHHH--------------HhhcccCCCHHHHH--
Confidence 1 1112246677889988544 67899999887665443100 00011111111121
Q ss_pred HHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHH-C
Q 001531 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD-Y 930 (1058)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~-~ 930 (1058)
++..++. -+.+-+++..+....+.+++.+.|++. +++. .+.+..+ ++++++ .+.+..+++++|.+ +
T Consensus 279 --~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~p~~g~f--~~~~l~-----~~~~~~~~~~~l~~~~ 346 (399)
T PRK07681 279 --AACAALR-NGAAFCEKNRGIYQERRDTLVDGFRTFGWNVD--KPAGSMF--VWAEIP-----KGWTSLSFAYALMDRA 346 (399)
T ss_pred --HHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHCCCccc--CCCeeeE--EEEECC-----CCCCHHHHHHHHHHhC
Confidence 1222222 223334455555567778888989875 3332 2223222 556664 24577889999987 8
Q ss_pred CccccC-CCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 001531 931 GFHGPT-MSWP--VPGTLMIEPTESESKEELDRYCDALIS 967 (1058)
Q Consensus 931 Gi~~~~-~~~p--~~~~Lris~te~~t~eeid~fi~aL~~ 967 (1058)
||.+.. ..|. .++.+||++. .++++++++++.|++
T Consensus 347 gv~v~pg~~f~~~~~~~iRis~~--~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 347 NVVVTPGHAFGPHGEGFVRIALV--QDEEVLQQAVENIRN 384 (399)
T ss_pred CEEEeCChhhCcCCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 997533 2343 2478999997 457899999998887
No 184
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.70 E-value=4.1e-15 Score=174.01 Aligned_cols=304 Identities=15% Similarity=0.122 Sum_probs=192.2
Q ss_pred hhcHHHHHHHHHHHHHHHhCCC---ceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcE
Q 001531 627 AQGYQEMFNNLGEWLCTITGFD---SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1058)
Q Consensus 627 ~qG~~~~~~el~~~lael~G~~---~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~ 703 (1058)
.+|..++...+++++++.+|.+ ...+..++|++. +...+++.+. .++++|++++..+..+...+...|++
T Consensus 64 ~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~--~l~~~~~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~ 136 (389)
T PRK05957 64 VQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNM--AFMNAILAIT-----DPGDEIILNTPYYFNHEMAITMAGCQ 136 (389)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHH--HHHHHHHHhc-----CCCCEEEEeCCCCcCHHHHHHhcCCE
Confidence 4688888889999999998974 334555556542 2233333321 25688999887777777777889999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-Ccccccc--cHHHHHHHHHHcCCEEEEeccCccc-ccC--cC
Q 001531 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMNA-QVG--LT 777 (1058)
Q Consensus 704 vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~--dI~eI~~lah~~g~lv~vD~a~~~a-l~g--l~ 777 (1058)
++.++.+.++.+|+++|+++++ +++++|++++|+ .+|.+.+ ++++|+++|+++|+++++|+++..- ... ..
T Consensus 137 ~~~v~~~~~~~~d~~~l~~~i~---~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~ 213 (389)
T PRK05957 137 PILVPTDDNYQLQPEAIEQAIT---PKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHF 213 (389)
T ss_pred EEEeecCCCCCcCHHHHHHhcC---cCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCcc
Confidence 9999998778899999999996 789999999985 6898762 5999999999999999999986311 111 01
Q ss_pred CC----CccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHH
Q 001531 778 SP----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (1058)
Q Consensus 778 ~p----g~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~ 853 (1058)
.+ ....--|++.++.|.|+.| |.++|++++++++.+.+.... .+...+++...+..
T Consensus 214 ~~~~~~~~~~~~i~~~S~SK~~g~~----GlRiG~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~q~~-- 273 (389)
T PRK05957 214 SPGSIPGSGNHTISLYSLSKAYGFA----SWRIGYMVIPIHLLEAIKKIQ--------------DTILICPPVVSQYA-- 273 (389)
T ss_pred ChhhCCCccCcEEEEecchhhccCc----cceeEEEecCHHHHHHHHHHH--------------hhcccCCCcHHHHH--
Confidence 11 1112236677788887533 667999999877665442110 00111211112211
Q ss_pred HHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCe-eeccCCCccceEEEEecccccccCCCCHHHHHHHHH-HCC
Q 001531 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPI-LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYG 931 (1058)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v-~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~-~~G 931 (1058)
+..++. -+.+-+++..+...++++++.+.|++.-.+ .+..+++.+ -++++++ .+.+..+++++|. ++|
T Consensus 274 --~~~~l~-~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~--~~~~~~~-----~~~~~~~~~~~l~~~~g 343 (389)
T PRK05957 274 --ALGALQ-VGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAF--YCFLKVN-----TDLNDFELVKQLIREYR 343 (389)
T ss_pred --HHHHHh-CChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeE--EEEEeCC-----CCCChHHHHHHHHHHCC
Confidence 112221 122234555555667788888888764221 121222222 1446654 2567889999987 589
Q ss_pred ccccC-CCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 932 FHGPT-MSWP--VPGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 932 i~~~~-~~~p--~~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
|.+.. ..|. ..+.+||++... +++++++.++.|.+.+++
T Consensus 344 v~v~pg~~f~~~~~~~iRis~~~~-~~~~l~~~~~~l~~~~~~ 385 (389)
T PRK05957 344 VAVIPGTTFGMKNGCYLRIAYGAL-QKATAKEGIERLVQGLKT 385 (389)
T ss_pred EEEccchhhCCCCCCEEEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 98642 2232 245899998543 467777777777665544
No 185
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.70 E-value=1e-14 Score=173.22 Aligned_cols=317 Identities=19% Similarity=0.198 Sum_probs=197.1
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCC--
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-- 711 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~-- 711 (1058)
+.++++.+++++|.+.+ +.+++|++++...++++. +++| |+++.+.+.++.....+.|.+++.+++++
T Consensus 80 ~~~Lreaia~~~~~~~v-v~t~ggt~A~~~~~~all--------~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~ 149 (460)
T PRK13238 80 YYRLEDAVKDIFGYPYT-IPTHQGRAAEQILFPVLI--------KKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEAL 149 (460)
T ss_pred HHHHHHHHHHHhCCCcE-EECCCHHHHHHHHHHHhC--------CCCC-EEccCCcccchHHHHHHcCCEEEEEeccccc
Confidence 45788899999998865 556677777644433321 3567 88887755566666889999999999863
Q ss_pred --------CCCCCHHHHHHHHHhcC-CCeEEEEEEcCC-Ccc-ccc--ccHHHHHHHHHHcCCEEEEeccCcc--ccc--
Q 001531 712 --------KGNINIEELRKAAEANR-DNLSTLMVTYPS-THG-VYE--EGIDEICKIIHDNGGQVYMDGANMN--AQV-- 774 (1058)
Q Consensus 712 --------~g~iD~e~L~~~i~~~~-~~taaV~vt~Pn-~~G-~i~--~dI~eI~~lah~~g~lv~vD~a~~~--al~-- 774 (1058)
.|.+|+++|+++|++++ ++|++|++++|+ .+| ..- .++++|+++|++||++|++|+|+.. +..
T Consensus 150 ~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~ 229 (460)
T PRK13238 150 DTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIK 229 (460)
T ss_pred cccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhh
Confidence 25699999999998543 479999999995 555 332 3689999999999999999998742 111
Q ss_pred ----Cc--CCCCc------cCCcEEEeCCccccccCCCCCCCceeEEEEeC-CCCCCCCCCCcccCCCCCCCCCCCCCCC
Q 001531 775 ----GL--TSPGY------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGT 841 (1058)
Q Consensus 775 ----gl--~~pg~------~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~-~l~~~lpg~~vg~~~d~g~~~~~~~t~~ 841 (1058)
+. ...++ -.+|+++++.||.+. ||.+|++++++ ++...+....+... +...
T Consensus 230 ~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~------~~~GG~i~~~d~~l~~~~~~~~~~~~----------g~~t 293 (460)
T PRK13238 230 QREPGYKDKSIKEIAREMFSYADGLTMSAKKDAM------VNIGGLLCFRDEDLFTECRTLCILYE----------GFPT 293 (460)
T ss_pred hccccccCCCHHHHhhhhcccCcEEEEecccCCC------CcceeEEEcChHHHHHHhhhcccccC----------Cccc
Confidence 11 11111 147999999999763 45458899884 56554422211000 0001
Q ss_pred CCccchhhHHHHHHHH-HHHH-HHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccc---c
Q 001531 842 IAAAPWGSALILPISY-TYIA-MMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKN---T 915 (1058)
Q Consensus 842 i~sa~~g~~~~~~~a~-a~l~-~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~---~ 915 (1058)
.+ |.+.....|. ..+. .+..+.+ +....++++|.+.|++. +++. .|.|. |-+.+|+..+.. .
T Consensus 294 ~~----g~~~~~~~Ala~~l~e~~~~~~~----~~~~~~~~~l~~~L~~~G~~~~--~p~Gg--~~v~~d~~~~~~~~~~ 361 (460)
T PRK13238 294 YG----GLAGRDMEALAVGLYEGMDEDYL----AYRIGQVEYLGEGLEEAGVPIQ--TPAGG--HAVFVDAGKFLPHIPA 361 (460)
T ss_pred cc----CcHHHHHHHHHhhHHHhhChHHH----HHHHHHHHHHHHHHHHCCCCeE--ccCCc--eEEEEEchhcCCCCCC
Confidence 11 1111111111 1122 2222222 23344679999999875 6664 33343 446788765421 1
Q ss_pred CCCCHHHHHHHHH-HCCccc-cC--CCCC-----------CCCEEEEEcCC-CCCHHHHHHHHHHHHHHHHHHHHHhcCC
Q 001531 916 AGIEPEDVAKRLM-DYGFHG-PT--MSWP-----------VPGTLMIEPTE-SESKEELDRYCDALISIREEIAQIENGK 979 (1058)
Q Consensus 916 ~g~~~~~v~k~L~-~~Gi~~-~~--~~~p-----------~~~~Lris~te-~~t~eeid~fi~aL~~i~~e~~~~~~~~ 979 (1058)
.+....+++.+|. +.||.+ +. ..++ ..+.+|+++.- .-|.+++|..+++|+.+.+.-..|.-=+
T Consensus 362 ~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 441 (460)
T PRK13238 362 EQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKENRESIKGLR 441 (460)
T ss_pred CCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHHhHhhcCCeE
Confidence 1234577888877 678875 21 1111 13689999875 3478999999999999987766654223
Q ss_pred CCCCCcccc
Q 001531 980 ADIHNNVLK 988 (1058)
Q Consensus 980 ~~~~~~~~~ 988 (1058)
+..+|..|+
T Consensus 442 ~~~~~~~~r 450 (460)
T PRK13238 442 FTYEPPVLR 450 (460)
T ss_pred EeecCccce
Confidence 444455444
No 186
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.70 E-value=2.6e-15 Score=189.92 Aligned_cols=320 Identities=14% Similarity=0.137 Sum_probs=196.6
Q ss_pred hcHHHHHHHHHHHHHHHhCCCce--eeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHH---HHhCCc
Q 001531 628 QGYQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCGM 702 (1058)
Q Consensus 628 qG~~~~~~el~~~lael~G~~~~--~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~---a~~~G~ 702 (1058)
+-..+.+.+.++.+++++|.+.. .+..++|++ +++.+++..+. ..++++||++...|.++-.. ++..|+
T Consensus 74 ~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT--~alnlva~~l~----~~~gd~Iv~t~~eH~svl~~~~~a~~~G~ 147 (805)
T PLN02724 74 MRSSDTIESARQQVLEYFNAPPSDYACVFTSGAT--AALKLVGETFP----WSSESHFCYTLENHNSVLGIREYALEKGA 147 (805)
T ss_pred hhHHHHHHHHHHHHHHHhCCCccceEEEEeCChH--HHHHHHHHHCC----CCCCCeEEEeeccccchHHHHHHHHHcCC
Confidence 33567788999999999998643 233334432 13334444431 12467899888878665543 345699
Q ss_pred EEEEEcCC--------CCCCCCH--HHHHHHHH----h---cCCCeEEEEEEcC-CCcccccccHHHHHHHHHHc-----
Q 001531 703 KIVSVGTD--------AKGNINI--EELRKAAE----A---NRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDN----- 759 (1058)
Q Consensus 703 ~vv~V~~d--------~~g~iD~--e~L~~~i~----~---~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~----- 759 (1058)
+++.++++ .+|.+|+ ++|++.++ . ..++|++|.+++- |.+|.+. |+++|..+++..
T Consensus 148 ~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~-pi~~i~~~~~~~~~~~~ 226 (805)
T PLN02724 148 AAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKF-PLDLVKLIKDNQHSNFS 226 (805)
T ss_pred eEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcC-CHHHHHHHHHhcccccc
Confidence 99999886 3455654 66777642 0 1246678888875 6799998 798775554432
Q ss_pred --C-CEEEEeccCcccccCcCCCCccCCcEEEeCCccccccCCCCCCC-ceeEEEEeCCCCCCCCCCCccc-CC------
Q 001531 760 --G-GQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVS-TG------ 828 (1058)
Q Consensus 760 --g-~lv~vD~a~~~al~gl~~pg~~GaDi~~~s~hKtf~~P~g~GGP-g~G~i~~~~~l~~~lpg~~vg~-~~------ 828 (1058)
| +++++|+++..+...+ ...++|+|++++++||+| ||| |+|++++++++...+....+|. +.
T Consensus 227 ~~g~~~v~vDaaQ~~g~~pi-Dv~~~~~Dfl~~S~HK~~------GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~ 299 (805)
T PLN02724 227 KSGRWMVLLDAAKGCGTSPP-DLSRYPADFVVVSFYKIF------GYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIAD 299 (805)
T ss_pred cCcceEEEeehhhhcCCCCC-ChhhcCCCEEEEecceec------cCCCCceEEEEehhhhhhhcCCccCCCceEEEecc
Confidence 3 5799999986554332 234689999999999998 456 7999999987665554333332 10
Q ss_pred -CC------CCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccC------Ce-ee
Q 001531 829 -GI------PAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHY------PI-LF 894 (1058)
Q Consensus 829 -d~------g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~------~v-~~ 894 (1058)
++ ...+.+.+|.++.+ . ..+..+..++..+ |+.++.++....++|+.++|+++. .+ +|
T Consensus 300 ~~~~~~~~~~~~rfE~GT~n~~~----i-~~l~aal~~l~~i---g~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iy 371 (805)
T PLN02724 300 IDFVKRRERVEQRFEDGTISFLS----I-AALRHGFKLLNRL---TISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLY 371 (805)
T ss_pred cceeeccccHHHHhcCCCcchhH----H-HHHHHHHHHHHHh---ChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEc
Confidence 00 01112444554432 2 1222344444444 567777888889999999998752 13 23
Q ss_pred ccCC------CccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCC--C--------------------------
Q 001531 895 RGVN------GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW--P-------------------------- 940 (1058)
Q Consensus 895 ~g~~------~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~--p-------------------------- 940 (1058)
|+. ......+.|.+.... ...+...++.+.+.++||.+++-.+ |
T Consensus 372 -g~~~~~~~~~~r~~ivsFnv~~~~-~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~ 449 (805)
T PLN02724 372 -GNHTFKLEFHIQGPIVTFNLKRAD-GSWVGHREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWD 449 (805)
T ss_pred -CCCCCCCCcccccCEEEEEEEcCC-CCEeCHHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCc
Confidence 321 011112333332110 0013345566655678997642110 0
Q ss_pred --------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 941 --------VPGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 941 --------~~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
..+++|+|+..++|++|||+|+++|++..-.
T Consensus 450 ~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~~ 488 (805)
T PLN02724 450 DQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFVS 488 (805)
T ss_pred hhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhhc
Confidence 0288999999999999999999999986544
No 187
>PRK05968 hypothetical protein; Provisional
Probab=99.70 E-value=1.6e-15 Score=177.07 Aligned_cols=273 Identities=18% Similarity=0.135 Sum_probs=192.3
Q ss_pred HHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---
Q 001531 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1058)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~--- 289 (1058)
..++|+.+|+++|.+. +.++.+|++++.++++++ . ++||+||++...|+.+...+...++..|+++++++.+
T Consensus 65 ~~~le~~lA~l~g~~~--av~~~sG~~Ai~~al~al-~--~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~ 139 (389)
T PRK05968 65 VRAFEEMLAKLEGAED--ARGFASGMAAISSTVLSF-V--EPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEE 139 (389)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-h--CCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHH
Confidence 4567899999999975 667889998887776665 2 3899999999999998887766667789999998764
Q ss_pred hhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCC
Q 001531 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1058)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1058)
++++ + ++|++|++++| |..+.+.|+++|+++||++|++++|+ +.++.+....|..+|+|+++.|. |.|++| |
T Consensus 140 ~l~~~i-~~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD-~a~a~~~~~~p~~~g~Divv~S~tK~l~g~---~ 214 (389)
T PRK05968 140 AVAKAL-PGAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMID-NSWASPVFQRPITLGVDLVIHSASKYLGGH---S 214 (389)
T ss_pred HHHHhc-ccCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEE-CCCcchhccCchhcCCcEEEeeccccccCC---C
Confidence 4555 5 57899999998 67899999999999999999999994 45566655557789999999998 878754 4
Q ss_pred CCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHH
Q 001531 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1058)
Q Consensus 367 GP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~i 446 (1058)
++.+|+++.++++++++... + +..-+ ..+ . ...|++ ...+-+.+...
T Consensus 215 ~~~gG~i~~~~~~~~~l~~~--------------------~----~~~~g-~~~---~---~~~A~~--~l~~L~tl~~r 261 (389)
T PRK05968 215 DTVAGVVAGSKEHIARINAE--------------------A----YPYLG-AKL---S---PFEAWL--LLRGLRTLPLR 261 (389)
T ss_pred CeEEEEEEECHHHHHHHHHH--------------------H----HHhCC-CCC---C---hHHHHH--HHcccCcHHHH
Confidence 45568998888766544100 0 00001 000 1 122222 34444566777
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEcC-C--C--------Cc-cEEEEecCC---HHHHHHHHHHcCceee---------e-
Q 001531 447 AQRVHGLAGTFALGLKKLGTVEVQG-L--P--------FF-DTVKVKCAD---AHAIASAAYKIEMNLR---------V- 501 (1058)
Q Consensus 447 a~~~~~~a~~l~~~L~~~G~~~l~~-~--~--------~~-~~v~i~~~~---~~~l~~~L~~~GI~~~---------~- 501 (1058)
.++..+++.++++.|++.++++.+. + + .+ ..|+|.+++ +.++.++|...++.++ +
T Consensus 262 ~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~~~~~f~~~L~~~~~~~s~G~~~slv~p~ 341 (389)
T PRK05968 262 MKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREGIDVRAFADALKLFRLGVSWGGHESLVVPA 341 (389)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCHHHHHHHHHhCCccEEecCCCCCCceeeeC
Confidence 7777889999999999886565432 1 0 11 256677653 6678888866554211 0
Q ss_pred -----------------ccCCeEEEEeccCCCHHHHHHHHHHHh
Q 001531 502 -----------------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 502 -----------------~~~~~lris~~~~~t~edid~ll~al~ 528 (1058)
+.++.+|+|++..++++=+++|.++|.
T Consensus 342 ~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~ 385 (389)
T PRK05968 342 EVVLQQKAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALA 385 (389)
T ss_pred cccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHH
Confidence 014679999998887777788877775
No 188
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.69 E-value=9.8e-15 Score=169.65 Aligned_cols=210 Identities=19% Similarity=0.188 Sum_probs=154.8
Q ss_pred HHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---hhh
Q 001531 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KDI 291 (1058)
Q Consensus 215 e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~---~~l 291 (1058)
++++.+|+|.|.+. +.++.+|++++.++++++ + ++||+||+++..|+.+...+....+.+|+++..++. +++
T Consensus 65 ~Le~~iA~le~~~~--~~~~~sG~~Ai~~~l~al-l--~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~~~e~l 139 (394)
T PRK09028 65 AFQAAIVELEGGAG--TALYPSGAAAISNALLSF-L--KAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPMIGEGI 139 (394)
T ss_pred HHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-h--CCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCCCHHHH
Confidence 56789999998764 789999999999888876 3 389999999999988887665445678999998876 446
Q ss_pred hc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCCCC
Q 001531 292 DY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGP 368 (1058)
Q Consensus 292 ~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~GGP 368 (1058)
++ ++++|++|++++| |.+|.+.|+++|+++||++|++++| ++.++.++...|.++||||++.|+ |+++++ |.-
T Consensus 140 ~~~l~~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvv-D~t~a~p~~~~Pl~~GaDivv~S~tK~l~Gh---~d~ 215 (394)
T PRK09028 140 RELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVML-DNTWASPINSRPFEMGVDISIQAATKYIVGH---SDV 215 (394)
T ss_pred HHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEE-ECCccccccCCccccCceEEEEeCCeEecCC---CCE
Confidence 66 7889999999998 7899999999999999999999999 456677777788999999999999 877643 222
Q ss_pred ceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHH
Q 001531 369 HAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQ 448 (1058)
Q Consensus 369 ~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~ 448 (1058)
-+|.++.++++.+++- ..++.-|. +. ++. ..|+...|-+-|.-..+
T Consensus 216 ~~G~~~~~~~~~~~l~-------------------------~~~~~~G~--~~--~p~-----~a~l~~rgl~TL~lR~~ 261 (394)
T PRK09028 216 MLGTATANEKHWDQLR-------------------------EHSYLMGQ--CT--SPD-----DVYLAMRGLRTLGVRLA 261 (394)
T ss_pred EEEEEECCHHHHHHHH-------------------------HHHHhcCC--CC--CHH-----HHHHHHcccCcHHHHHH
Confidence 2465555554433220 00011110 00 111 12345556666667778
Q ss_pred HHHHHHHHHHHHHhcCCCe
Q 001531 449 RVHGLAGTFALGLKKLGTV 467 (1058)
Q Consensus 449 ~~~~~a~~l~~~L~~~G~~ 467 (1058)
+..++|..+++.|++.+.+
T Consensus 262 ~~~~na~~la~~L~~~p~v 280 (394)
T PRK09028 262 QHEKNALKVANWLATRPEV 280 (394)
T ss_pred HHHHHHHHHHHHHhcCCCc
Confidence 8889999999999988644
No 189
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.69 E-value=1.1e-15 Score=176.79 Aligned_cols=282 Identities=16% Similarity=0.196 Sum_probs=179.3
Q ss_pred HHHHHHHHHHhCCCceeeec-CchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCC
Q 001531 635 NNLGEWLCTITGFDSFSLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1058)
Q Consensus 635 ~el~~~lael~G~~~~~l~~-~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g 713 (1058)
.++++.+++++|.+...+.. ++|+++ ++.++++.+. .++++|+++...+..+...++..|++++.++.+.++
T Consensus 72 ~~lr~~ia~~~~~~~~~i~~~~~Ga~~--~i~~~~~~~~-----~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 144 (361)
T PRK00950 72 PELREALSKYTGVPVENIIVGGDGMDE--VIDTLMRTFI-----DPGDEVIIPTPTFSYYEISAKAHGAKPVYAKREEDF 144 (361)
T ss_pred HHHHHHHHHHhCCCHHHEEEeCCCHHH--HHHHHHHHhc-----CCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCC
Confidence 57888899999988755555 566653 2223333321 246789998875555555577899999999987777
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCC--CccCCcEEEeC
Q 001531 714 NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP--GYIGADVCHLN 790 (1058)
Q Consensus 714 ~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~p--g~~GaDi~~~s 790 (1058)
.+|+++++++++ +++++|++++|+ .+|.+. +++++.++|+++|+++++|+++..-...-..+ ....--++..+
T Consensus 145 ~~~~~~l~~~~~---~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S 220 (361)
T PRK00950 145 SLDVDSVLNAIT---EKTKVIFLCTPNNPTGNLI-PEEDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRT 220 (361)
T ss_pred CcCHHHHHHHhc---cCCCEEEEeCCCCCCCCCc-CHHHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEe
Confidence 899999999986 678888889995 789998 79999999999999999999973111100000 01111255667
Q ss_pred CccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHH
Q 001531 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1058)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1058)
++|+|+.| |.++|++.+++++...+-.. + ....++ ..++ .++..++. ..+-+.+
T Consensus 221 ~SK~~g~~----GlRiG~~~~~~~~~~~~~~~------------~--~~~~~~--~~~~----~~a~~~l~--~~~~~~~ 274 (361)
T PRK00950 221 FSKVFGLA----GLRIGYGFVPEWLIDYYMRA------------K--TPFSLT--RLSQ----AAAIAALS--DKEYIEK 274 (361)
T ss_pred ehHhhcCc----hhhcchhcCCHHHHHHHHHh------------c--CCCCCC--HHHH----HHHHHHhc--CHHHHHH
Confidence 88888543 56799998877655432100 0 001111 1111 12222222 1222444
Q ss_pred HHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccC-CCCCC--CCEEEE
Q 001531 871 ASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWPV--PGTLMI 947 (1058)
Q Consensus 871 ~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~-~~~p~--~~~Lri 947 (1058)
..++...+.+++.+.|+ +.+ + .+.+. -+++++. +.+..+++++|.++||.+.. ..|+. ++.+||
T Consensus 275 ~~~~~~~~r~~l~~~l~--~~~-~-~~~~~---~i~~~~~------~~~~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRi 341 (361)
T PRK00950 275 SIEHGIKSREYLYNELP--FKV-Y-PSEAN---FVLVDVT------PMTAKEFCEELLKRGVIVRDCTSFRGLGDYYIRV 341 (361)
T ss_pred HHHHHHHHHHHHHhhcC--eeE-C-CCcce---EEEEECC------CCCHHHHHHHHHHCCEEEeeCCccCCCCCCeEEE
Confidence 44444455566666664 222 2 11221 2455653 35788999999999998743 33432 468999
Q ss_pred EcCCCCCHHHHHHHHHHHHHHH
Q 001531 948 EPTESESKEELDRYCDALISIR 969 (1058)
Q Consensus 948 s~te~~t~eeid~fi~aL~~i~ 969 (1058)
++. +.+|+++++++|++++
T Consensus 342 s~~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 342 SIG---TFEENERFLEILKEIV 360 (361)
T ss_pred ECC---CHHHHHHHHHHHHHHh
Confidence 986 6789999999998875
No 190
>PRK07324 transaminase; Validated
Probab=99.69 E-value=4e-15 Score=173.05 Aligned_cols=291 Identities=15% Similarity=0.178 Sum_probs=177.7
Q ss_pred HHHHHHHHHhC-CCceeeecCch-HHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCC-
Q 001531 636 NLGEWLCTITG-FDSFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 712 (1058)
Q Consensus 636 el~~~lael~G-~~~~~l~~~sG-a~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~- 712 (1058)
++++.++++++ .+..++..++| ++|. .++++.+. +++++|+++.+.|..+...++..|.+++.++.+++
T Consensus 66 ~lr~~ia~~~~~~~~~~vi~t~G~~~al---~~~~~~l~-----~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~ 137 (373)
T PRK07324 66 EFKEAVASLYQNVKPENILQTNGATGAN---FLVLYALV-----EPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEEN 137 (373)
T ss_pred HHHHHHHHHhcCCChhhEEEcCChHHHH---HHHHHHhC-----CCCCEEEEcCCCchhHHHHHHHcCCEEEEEeccccc
Confidence 56677777764 55544444444 4444 33333331 35688999988777777778899999999999764
Q ss_pred -CCCCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCcc-cccC-cCCCCcc-CCc
Q 001531 713 -GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG-LTSPGYI-GAD 785 (1058)
Q Consensus 713 -g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~-al~g-l~~pg~~-GaD 785 (1058)
..+|+++|+++++ +++++|++++|+ .+|.+- +++++|+++|+++|+++++|+++.. ...+ ....... .-.
T Consensus 138 ~~~~d~~~l~~~~~---~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~ 214 (373)
T PRK07324 138 GWLPDLDELRRLVR---PNTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKG 214 (373)
T ss_pred CCCCCHHHHHHhCC---CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCE
Confidence 3589999999886 789999999995 789875 2389999999999999999998631 1111 1111111 123
Q ss_pred EEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHch
Q 001531 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1058)
Q Consensus 786 i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1058)
|++.+++|+|+.| |.++|++++++.+.+.+... +....++.+...+. ++...+. ..
T Consensus 215 I~~~s~SK~~~~~----G~RiG~i~~~~~li~~~~~~--------------~~~~~~~~~~~~q~----~a~~~l~--~~ 270 (373)
T PRK07324 215 ISTNSMSKTYSLP----GIRVGWIAANEEVIDILRKY--------------RDYTMICAGVFDDM----LASLALE--HR 270 (373)
T ss_pred EEEecchhhcCCc----cceeEEEecCHHHHHHHHHH--------------hCcEEecCChHHHH----HHHHHHc--CH
Confidence 6677888988644 78899999977665443110 01112222111221 1111121 12
Q ss_pred h-hHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHH-HCCccc-cCCCCCCC
Q 001531 866 K-GLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHG-PTMSWPVP 942 (1058)
Q Consensus 866 e-Gl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~-~~Gi~~-~~~~~p~~ 942 (1058)
+ -+++..+...++.+.+.+.|++...+.+..+++..+ +.+.++ .+.+..+++++|. ++|+.+ +...|..+
T Consensus 271 ~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~--~~i~~~-----~~~~~~~~~~~ll~~~gv~v~pg~~F~~~ 343 (373)
T PRK07324 271 DAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVST--SFVKLD-----VDMPSEDFCLKLLKETGVLLVPGNRFDLE 343 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEE--EEEEeC-----CCCCHHHHHHHHHHhcCEEEECccccCCC
Confidence 2 233344444566777888887642221112223222 334443 1356788999975 679875 33445567
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001531 943 GTLMIEPTESESKEELDRYCDALISIRE 970 (1058)
Q Consensus 943 ~~Lris~te~~t~eeid~fi~aL~~i~~ 970 (1058)
+.+||+++. +++.+++.++.|++.++
T Consensus 344 ~~iRis~~~--~~~~l~~~l~rl~~~l~ 369 (373)
T PRK07324 344 GHVRIGYCC--DTETLKKGLKKLSEFLR 369 (373)
T ss_pred CeEEEEecC--CHHHHHHHHHHHHHHHH
Confidence 899999864 46667766666666554
No 191
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.69 E-value=6.7e-15 Score=173.64 Aligned_cols=320 Identities=19% Similarity=0.254 Sum_probs=204.3
Q ss_pred cccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCC-ceeeecCchHHHHHHHHHHHH
Q 001531 591 MIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIR 669 (1058)
Q Consensus 591 ~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~-~~~l~~~sGa~ge~a~llair 669 (1058)
...+|+|.+.+..++..+.....-+..+.+ . +...++.+.|++++..+ ...++.++|++++++++..+|
T Consensus 86 ~~~lGh~hp~v~~Av~~ql~~l~~~~~~~~-~---------~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr 155 (442)
T TIGR03372 86 IFNVGHRNPNVIAAVENQLAKQPLHSQELL-D---------PLRALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAK 155 (442)
T ss_pred hhhcCCCCHHHHHHHHHHHHhCCCcccccC-C---------HHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHH
Confidence 345788888777666665321111111111 1 23457888999988643 234678999999998999888
Q ss_pred HHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCCc------------EEEEEcCCCCCCCCHHHHHHHHHh---cCCCeEE
Q 001531 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAKGNINIEELRKAAEA---NRDNLST 733 (1058)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G~------------~vv~V~~d~~g~iD~e~L~~~i~~---~~~~taa 733 (1058)
.|...+| |.+|| ...++||....+....|- .+..+|+ .|.+++++.+++ +++++++
T Consensus 156 ~~t~~~g---r~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~-----~d~~~~~~~l~~~~~~~~~vAa 227 (442)
T TIGR03372 156 AYQSPRG---KFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF-----GDIEAMLKALNECKKTGDDVAA 227 (442)
T ss_pred HHHhhcC---CcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC-----CCHHHHHHHHHHHhcCCCcEEE
Confidence 8754333 44555 567899987665443221 1344444 367888887753 4467888
Q ss_pred EEEEcC-CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc------C--CcEEEeCCccccccCCCC
Q 001531 734 LMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNLHKTFCIPHGG 801 (1058)
Q Consensus 734 V~vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~------G--aDi~~~s~hKtf~~P~g~ 801 (1058)
|+++.- +..|++.+ .++++.++|++||+++++|+++ .|+.+.|.+ | +||+++ .|.+ ++
T Consensus 228 vIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~----tG~GRtG~~~a~e~~gv~PDivt~--gK~l----g~ 297 (442)
T TIGR03372 228 IILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQ----TGMGRTGKMFACEHEGVQPDILCL--AKAL----GG 297 (442)
T ss_pred EEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecc----cCCCccccchhhhhcCCCCCeeee--hhhh----cC
Confidence 888753 45576652 2999999999999999999985 456566643 3 688775 4665 44
Q ss_pred C-CCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHH
Q 001531 802 G-GPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNAN 880 (1058)
Q Consensus 802 G-GPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~ 880 (1058)
| -| +|.+++++++...+.... ....+++.|++..++++.+.|..+-++++.+. .....+
T Consensus 298 G~~P-igavv~~~~i~~~~~~~~----------------~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~~---~~~~G~ 357 (442)
T TIGR03372 298 GVMP-IGATIATEAVFSVLFDNP----------------FLHTTTFGGNPLACAAALATINELLEKNLPAQ---AAIKGD 357 (442)
T ss_pred Cccc-ceEEEecHHHHHhhhccC----------------ccccCCCCCCHHHHHHHHHHHHHHHhccHHHH---HHHHHH
Confidence 4 25 555666776665442110 00112244677778888888888877765543 345677
Q ss_pred HHHHHHhcc---CC-ee--eccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCC
Q 001531 881 YMAKRLEKH---YP-IL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESES 954 (1058)
Q Consensus 881 yL~~~L~~~---~~-v~--~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t 954 (1058)
+|+++|+++ ++ .+ +.|. |.+ +-+.+.+ ......+.+.|.++|+.+..... ..+.+||.|+...|
T Consensus 358 ~l~~~L~~l~~~~~~~i~~vRG~-Gl~---~giel~~-----~~~~~~i~~~l~~~Gvl~~~~~~-~~~~lr~~Ppl~~t 427 (442)
T TIGR03372 358 FLLDGFQQLAAEYPDLIIEARGK-GLL---MAIEFRD-----NEIGYAFAKELFQQNILVAGTLN-NAKSIRIEPPLTIT 427 (442)
T ss_pred HHHHHHHHHHHhCCCceEEEecc-eEE---EEEEeCC-----hHHHHHHHHHHHHCCcEEeecCC-CCCEEEEECCcccC
Confidence 888888764 33 21 2232 322 2233221 12346789999999999754321 14789999999999
Q ss_pred HHHHHHHHHHHHHH
Q 001531 955 KEELDRYCDALISI 968 (1058)
Q Consensus 955 ~eeid~fi~aL~~i 968 (1058)
++|+|+++++|.++
T Consensus 428 ~~~id~~~~~l~~~ 441 (442)
T TIGR03372 428 IEQCALVIKAAKDA 441 (442)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999875
No 192
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.69 E-value=2.5e-15 Score=174.03 Aligned_cols=277 Identities=16% Similarity=0.122 Sum_probs=183.4
Q ss_pred HHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCC---------------EEEEcCCCCHHHHHHHHHh
Q 001531 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKK---------------TFIIASNCHPQTIDICITR 275 (1058)
Q Consensus 211 ~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd---------------~Vlv~~~~Hps~~~~~~~~ 275 (1058)
+.+.++++.+|+++|.+. +.++.|+|++...+++++. . +|| +||++...+..+...+...
T Consensus 45 ~~~~~~~~~~a~~~g~~~--~~~~~g~t~al~~al~al~-~--~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~ 119 (363)
T TIGR01437 45 ELVNKTGEYIANLLGVED--AVIVSSASAGIAQSVAAVI-T--RGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETM 119 (363)
T ss_pred HHHHHHHHHHHHhhCCCe--EEEEcCHHHHHHHHHHHHh-c--CCCcchhhcccccccccceEEEECccchhcCCchHHH
Confidence 556788999999999874 7788999999998888762 2 565 7777763333322122222
Q ss_pred hcCCCeEEEEeC------chhhhc-cCCCEeEEE-EEc-CCCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCc
Q 001531 276 ADGFDIKVVVSD------LKDIDY-KSGDVCGVL-VQY-PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGE 346 (1058)
Q Consensus 276 a~~~gi~v~~v~------~~~l~~-l~~~t~~V~-v~~-pn~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~ 346 (1058)
+...|.++++++ ++++++ ++++|++++ +++ +|++|.+.|+++|+++||++|+++++|+ .++.. +....+
T Consensus 120 ~~~~g~~~v~v~~~~~~d~~~le~ai~~~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~-a~~~~-~~~~~~ 197 (363)
T TIGR01437 120 VRLGGGKVVEAGYANECSAEQLEAAITEKTAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDA-AAEED-LQKYYR 197 (363)
T ss_pred HHhcCCeEEEEcCCCCCCHHHHHHhcChhceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEEC-CCCCc-hHHHHH
Confidence 334688888764 456777 888998766 555 4789999999999999999999999943 23321 122356
Q ss_pred ccceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhH
Q 001531 347 LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA 425 (1058)
Q Consensus 347 ~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~ 425 (1058)
+|+|++++|+ |+|+ ||..|+++.++++++.+.....| ..+. .+.+|. .
T Consensus 198 ~g~D~~~~S~~K~l~------gp~~G~l~~~~~~i~~~~~~~~~------~~~~-------------~~~~~~------~ 246 (363)
T TIGR01437 198 LGADLVIYSGAKAIE------GPTSGLVLGKKKYIEWVKLQSKG------IGRA-------------MKVGKE------N 246 (363)
T ss_pred cCCCEEEEeCCcccC------CCceEEEEEcHHHHHHHHhccCC------Ccce-------------eccCHH------H
Confidence 8999999998 6664 45568888888777665321111 0000 112222 2
Q ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcC--C-C--Ccc--EEEEecC--C--HHHHHHHHHH
Q 001531 426 LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG--L-P--FFD--TVKVKCA--D--AHAIASAAYK 494 (1058)
Q Consensus 426 l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~--~-~--~~~--~v~i~~~--~--~~~l~~~L~~ 494 (1058)
+.++.+++ .++...|.+.+.++. +++.+++++|++++|+++.. + . .++ .+++... + ..++.++|.+
T Consensus 247 ~~gl~aAl--~~~~~~~~~~~~~~~-~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~ 323 (363)
T TIGR01437 247 ILGLTAAL--EQYLSTGKESGAEMV-AKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDESELGMTAADVVQALRQ 323 (363)
T ss_pred HHHHHHHH--HHHHccCcccHHHHH-HHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEeccCCCCCHHHHHHHHhc
Confidence 44555555 333334544444444 35668999999985588762 1 1 112 3455542 3 7899999998
Q ss_pred cC--ceeee--ccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 495 IE--MNLRV--VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 495 ~G--I~~~~--~~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
+| |..+. ...+.+++++.. ++++|++.++++|..
T Consensus 324 ~~~~I~~r~~~~~~~~~~l~~~~-~~~~e~~~~~~~l~~ 361 (363)
T TIGR01437 324 GEPAIYTRGYKANEGIIEIDPRS-VTGGQLDIIVERIRE 361 (363)
T ss_pred CCCCEEEeeeeecCCeEEEEeec-CCHHHHHHHHHHHHH
Confidence 77 56654 246889999986 559999999999863
No 193
>PRK07682 hypothetical protein; Validated
Probab=99.69 E-value=2.4e-15 Score=175.25 Aligned_cols=335 Identities=13% Similarity=0.157 Sum_probs=204.7
Q ss_pred ccccccccccCCcccccccccccccc-cccCCCCchhhhhcHHHHHHHHHHHHHHHhCCC--ce-eeecCchH-HHHHHH
Q 001531 590 SMIPLGSCTMKLNATTEMMPVTWPSF-ANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGA-AGEYAG 664 (1058)
Q Consensus 590 ~~i~lGs~t~~~~~~~~~~~~~~~~f-~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~--~~-~l~~~sGa-~ge~a~ 664 (1058)
+++.|+.+.+.+.+............ ..+..|.+ .+|..++...+.+++.+.+|.+ .. .+..++|+ ++.
T Consensus 21 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al--- 94 (378)
T PRK07682 21 GVISLGVGEPDFVTPWNVREASIRSLEQGYTSYTA---NAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQAL--- 94 (378)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCCCC---CCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH---
Confidence 45778887776543221110000000 01223333 3577777777777777766764 22 34444554 333
Q ss_pred HHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCC--CCCCCHHHHHHHHHhcCCCeEEEEEEcC-CC
Q 001531 665 LMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYP-ST 741 (1058)
Q Consensus 665 llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~--~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~ 741 (1058)
.++++.+. .+++.|++++..|+.+...+++.|.+++.++.+. ++.+|+++|++++. +++++|++++| |.
T Consensus 95 ~~~~~~l~-----~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~~~~p~NP 166 (378)
T PRK07682 95 DVAMRAII-----NPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAIT---AKTKAILLCSPNNP 166 (378)
T ss_pred HHHHHHhC-----CCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcC---cccEEEEEECCCCC
Confidence 33344331 2567899998877767677888999999998753 46799999999986 68899999999 47
Q ss_pred ccccc--ccHHHHHHHHHHcCCEEEEeccCcccc-cC-cCC----CCccCCcEEEeCCccccccCCCCCCCceeEEEEeC
Q 001531 742 HGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG-LTS----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK 813 (1058)
Q Consensus 742 ~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~al-~g-l~~----pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~ 813 (1058)
+|.+- +++++|+++|+++|+++++|+++..-. .+ ... ++...-.+++.+++|+|+.| |.++|++++++
T Consensus 167 tG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----GlR~G~~~~~~ 242 (378)
T PRK07682 167 TGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMT----GWRLGFIAAPV 242 (378)
T ss_pred cCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccCh----hhhhhhhhcCH
Confidence 88874 259999999999999999999864111 11 000 11112346778889988644 56799999987
Q ss_pred CCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCe
Q 001531 814 HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPI 892 (1058)
Q Consensus 814 ~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v 892 (1058)
++.+.+-.. ......+.+...+ .++..++. -|.+.+++..+...++++++.+.|++. +++
T Consensus 243 ~~i~~l~~~--------------~~~~~~~~~~~~q----~a~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~ 303 (378)
T PRK07682 243 YFSEAMLKI--------------HQYSMMCAPTMAQ----FAALEALR-AGNDDVIRMRDSYRKRRNFFVTSFNEIGLTC 303 (378)
T ss_pred HHHHHHHHH--------------HHhhccCCCHHHH----HHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 665543110 0001112111112 12222222 233345556666678888999999875 332
Q ss_pred eeccCCCccceEEEEecccccccCCCCHHHHHHHHH-HCCcccc-CCCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001531 893 LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHGP-TMSWP--VPGTLMIEPTESESKEELDRYCDALISI 968 (1058)
Q Consensus 893 ~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~-~~Gi~~~-~~~~p--~~~~Lris~te~~t~eeid~fi~aL~~i 968 (1058)
..+++.++ +++++++ .+.+..++++.|. ++|+.+. ...|. .++.+||++.. +++++++.++.|+++
T Consensus 304 --~~p~g~~~--~~~~~~~----~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~--~~~~l~~~l~~l~~~ 373 (378)
T PRK07682 304 --HVPGGAFY--AFPSISS----TGLSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYAT--SLEQLQEAMKRMKRF 373 (378)
T ss_pred --CCCCeeEE--EEEeccC----CCCCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCC--CHHHHHHHHHHHHHH
Confidence 22333221 3344431 1356788998876 7899864 22232 25889999974 588999999999887
Q ss_pred HHH
Q 001531 969 REE 971 (1058)
Q Consensus 969 ~~e 971 (1058)
+++
T Consensus 374 l~~ 376 (378)
T PRK07682 374 VEN 376 (378)
T ss_pred Hhh
Confidence 654
No 194
>PRK07482 hypothetical protein; Provisional
Probab=99.69 E-value=1.3e-14 Score=172.82 Aligned_cols=343 Identities=14% Similarity=0.182 Sum_probs=211.9
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhC--CCceeeecCchHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIR 669 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G--~~~~~l~~~sGa~ge~a~llair 669 (1058)
..+|++.+.+..++..+. ....+ ++++.- -..+...++.+.|++++. ++. .++.++|++++++++.++|
T Consensus 62 ~~lGh~~p~v~~Av~~q~-~~~~~--~~~~~~-----~~~~~~~~lAe~L~~~~p~~~~~-v~f~~sGSEAve~AlKlAr 132 (461)
T PRK07482 62 VNVGYGRTEVAEAIAEQA-KELAY--YHTYVG-----HGTEASITLSKRIIDRAPAGMSK-VYYGLSGSDANETQIKLVW 132 (461)
T ss_pred hcCCCCCHHHHHHHHHHH-HhcCc--cccccc-----cCCHHHHHHHHHHHHhCCCCcCE-EEEeCchHHHHHHHHHHHH
Confidence 367888877777766663 22111 111100 011334578888999884 443 4678899999999999999
Q ss_pred HHHHHcCCCCCCEEEE-cCCCCCccHHHHHhCCc------------EEEEEcCCCC------C-------CCCHHHHHHH
Q 001531 670 AYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM------------KIVSVGTDAK------G-------NINIEELRKA 723 (1058)
Q Consensus 670 ~y~~~~G~~~r~~Vli-p~saHg~~pa~a~~~G~------------~vv~V~~d~~------g-------~iD~e~L~~~ 723 (1058)
.|...+|..+|++||. ..++||....+..+.|. .+..++.... + .-++++|++.
T Consensus 133 ~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~ 212 (461)
T PRK07482 133 YYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEEL 212 (461)
T ss_pred HHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHH
Confidence 8876566545666764 67899976543322211 1233332111 1 1146788888
Q ss_pred HHh-cCCCeEEEEEEcC-CCccccc---ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc--------CCcEEEeC
Q 001531 724 AEA-NRDNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLN 790 (1058)
Q Consensus 724 i~~-~~~~taaV~vt~P-n~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~--------GaDi~~~s 790 (1058)
+++ ..+++++|+++.- ...|++. ..+++|.++|++||+++|+|++ +.|+.+.|++ -+|++++
T Consensus 213 ~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV----~tGfGRtG~~~a~~~~gv~PDiv~~- 287 (461)
T PRK07482 213 ILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEV----VTGFGRLGSMFGSDHYGIEPDLITV- 287 (461)
T ss_pred HHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEecc----ccCCCcCcchhhHHhcCCCCCEEEE-
Confidence 853 3467888888753 3456664 2589999999999999999998 5677777754 2699887
Q ss_pred CccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHH
Q 001531 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1058)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1058)
.|.++ +|-..+|.+++++++.+.+.... + ..... ...+++.|+++.++++.+.|..+-++++.+
T Consensus 288 -gKgl~----gG~~Pi~av~~~~~i~~~~~~~~-----~-----~~~~~-~h~~T~~gnpl~~Aaa~a~L~~~~~~~l~~ 351 (461)
T PRK07482 288 -AKGLT----SAYAPLSGSIVGEKVWDVLEQGS-----D-----EHGAI-GHGWTYSGHPICAAAALANLDILERENLVG 351 (461)
T ss_pred -ccccc----cCccccceeeecHHHHHHHhccc-----c-----cCCcc-ccCCCCCcCHHHHHHHHHHHHHHHhCCHHH
Confidence 47763 44334666777776654332100 0 00000 111235578888888999999887777554
Q ss_pred HHHHHHHHHHHHHHHHhcc---CCee--eccCCCccceEEEEecccccc-cCCC-----CHHHHHHHHHHCCccccCCCC
Q 001531 871 ASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKN-TAGI-----EPEDVAKRLMDYGFHGPTMSW 939 (1058)
Q Consensus 871 ~a~~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~~~~-~~g~-----~~~~v~k~L~~~Gi~~~~~~~ 939 (1058)
.+ ....++|.++|++. ++++ +.|. | .+. -+.+..-.. .... -...+.+.|.++|+.+...
T Consensus 352 ~~---~~~g~~l~~~L~~l~~~~~~v~~vrG~-G-lm~--giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~-- 422 (461)
T PRK07482 352 NA---AEVGAYFRARLRAAFGDHPLVGEVRGV-G-MLA--AVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARAM-- 422 (461)
T ss_pred HH---HHHHHHHHHHHHHHHhcCCCEEEEeec-e-eEE--EEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecC--
Confidence 43 45677888888753 3322 2232 3 222 122210000 0001 1357888899999986422
Q ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001531 940 PVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1058)
Q Consensus 940 p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~ 973 (1058)
|..+.+++.|+..+|++|||+++++|.++++++.
T Consensus 423 ~~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~~ 456 (461)
T PRK07482 423 PHGDILGFAPPLVLTRAEADEIVAIAKDAVDEVL 456 (461)
T ss_pred CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2247899999999999999999999999988763
No 195
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.69 E-value=1.2e-14 Score=170.14 Aligned_cols=319 Identities=19% Similarity=0.230 Sum_probs=197.9
Q ss_pred cccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHH
Q 001531 593 PLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYH 672 (1058)
Q Consensus 593 ~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~ 672 (1058)
.+|++.+++..+...+ +.+ +...++. ...+...++.+++++..+++. .++.++|++++++++.++|.|.
T Consensus 49 ~lGh~~p~v~~a~~~q-~~~--~~~~~~~-------~~~~~~~~la~~l~~~~~~~~-v~f~~SGseA~e~Aik~ar~~~ 117 (395)
T PRK03715 49 CLGHCNPGMVEALAAQ-AEK--LINPSPA-------FYNEPMAKLAGLLTQHSCFDK-VFFANSGAEANEGAIKLARKWG 117 (395)
T ss_pred cCCCCCHHHHHHHHHH-HHh--ccccccc-------ccCHHHHHHHHHHhhccCCCE-EEEeCCcHHHHHHHHHHHHHHh
Confidence 5787776666555554 221 1111110 011334577788887776654 4678899999998888888875
Q ss_pred HHcCCCCCCEEE-EcCCCCCccHHHHHhCCcEEE---EEcCCCC----CCCCHHHHHHHHHhcCCCeEEEEEEcCC-Ccc
Q 001531 673 KARGDHHRNVCI-IPVSAHGTNPATAAMCGMKIV---SVGTDAK----GNINIEELRKAAEANRDNLSTLMVTYPS-THG 743 (1058)
Q Consensus 673 ~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G~~vv---~V~~d~~----g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G 743 (1058)
...+ .++++|+ ...++||..-..+...|.... ..|.... ...|+++++++++ +++++|+++... ..|
T Consensus 118 ~~~~-~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~aavi~Epv~~~gG 193 (395)
T PRK03715 118 RKHK-NGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLIT---DKTVAVMLEPVQGEGG 193 (395)
T ss_pred hccC-CCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcC---CCceEEEEeCCcCCCC
Confidence 4222 2344555 566889987766555443211 1111111 1258899999886 688888888653 456
Q ss_pred cccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc--------CCcEEEeCCccccccCCCCCCCceeEEEEe
Q 001531 744 VYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVK 812 (1058)
Q Consensus 744 ~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~--------GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~ 812 (1058)
++.+ .+++|.++|++||+++++|+++. |+.+.|.+ .+|++++ .|.++ +|.| +|.++++
T Consensus 194 ~~~~~~~~l~~l~~l~~~~~~llI~DEv~t----G~GRtG~~~a~~~~gv~PDi~t~--gK~lg----~G~p-~~av~~~ 262 (395)
T PRK03715 194 VIPATREFMQQLRALTKQHGLLLIVDEVQT----GCGRTGTLFAYELSGIEPDIMTL--GKGIG----GGVP-LAALLAK 262 (395)
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEEecccc----CCCCCcchhhHhhcCCCCceeee--hhhhh----CCcc-eEEEEEc
Confidence 6642 29999999999999999999853 45555542 3688766 48774 3435 6666778
Q ss_pred CCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---
Q 001531 813 KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--- 889 (1058)
Q Consensus 813 ~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~--- 889 (1058)
+++..+.++.. .+++.|+++.++++.+.+..+.++++. ++..++.++|+++|+++
T Consensus 263 ~~i~~~~~~~~-------------------~~T~~g~pl~~aaala~L~~l~~~~l~---~~~~~~g~~l~~~L~~l~~~ 320 (395)
T PRK03715 263 AEVAVFEAGDQ-------------------GGTYNGNPLMTAVGVAVISQLLAPGFL---EGVRARGEYLKEKLLELSEE 320 (395)
T ss_pred cccccccCCCc-------------------CCCCCCCHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHHHhhc
Confidence 77754333210 111234566777778888887655544 44556778888888764
Q ss_pred CCee-eccCCCccceEEEEecccccccCCCCHHHHHHHHHHC---CccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHH
Q 001531 890 YPIL-FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY---GFHGPTMSWPVPGTLMIEPTESESKEELDRYCDAL 965 (1058)
Q Consensus 890 ~~v~-~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~---Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL 965 (1058)
+.+. ..|. +. + +-+.+.. .....+.+.+.+. |+.+.... +++|||+|+..+|++|||+++++|
T Consensus 321 ~~i~~vrG~-Gl-m--~~i~l~~------~~~~~~~~~~~~~~~~Gi~~~~~~---~~~lR~~p~l~~t~~ei~~~~~~l 387 (395)
T PRK03715 321 RGLEGERGE-GL-L--RALLLGK------DIGPQIVEKARDMQPDGLLLNAPR---PNLLRFMPALNVTTEEIDQMIAML 387 (395)
T ss_pred CCcCeEEcc-ee-E--EEEEecC------chHHHHHHHHHhccCCCEEEeecC---CCEEEEeCCcccCHHHHHHHHHHH
Confidence 2221 2231 22 1 2233321 1133444444444 98875332 478999999999999999999999
Q ss_pred HHHHHHH
Q 001531 966 ISIREEI 972 (1058)
Q Consensus 966 ~~i~~e~ 972 (1058)
.+++.++
T Consensus 388 ~~~l~~~ 394 (395)
T PRK03715 388 RSVLDKL 394 (395)
T ss_pred HHHHHhh
Confidence 9988653
No 196
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.69 E-value=4.2e-15 Score=172.49 Aligned_cols=211 Identities=15% Similarity=0.147 Sum_probs=155.9
Q ss_pred HHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---hh
Q 001531 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1058)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~---~~ 290 (1058)
.++|+.+|++.|.+. +.++.+|++++.++++++ . ++||+||+++..|+.+...+....+..|+++++++. ++
T Consensus 53 ~~lE~~lA~l~g~~~--~~~~~sG~~Ai~~al~al-l--~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~~e~ 127 (377)
T TIGR01324 53 FALQDAMCELEGGAG--CYLYPSGLAAVTNSILAF-V--KAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPLIGED 127 (377)
T ss_pred HHHHHHHHHHhCCCc--EEEECcHHHHHHHHHHHh-c--CCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHH
Confidence 456789999999864 888999999999888877 3 389999999999988776655445567999998876 45
Q ss_pred hhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCCC
Q 001531 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1058)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~GG 367 (1058)
+++ ++++|++|++++| |++|.+.|+++|+++||++|++++|| +.++.|.+..|.++|+||+++|+ |+++++ |+
T Consensus 128 l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD-~t~a~g~~~~pl~~gaDivv~S~tK~l~G~---~d 203 (377)
T TIGR01324 128 IATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMID-NTWAAGLLFKPLEHGVDISIQAGTKYLVGH---SD 203 (377)
T ss_pred HHHhcCCCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEE-CCCccccccCccccCceEEEecCceeccCC---CC
Confidence 766 7889999999998 78999999999999999999999994 57788888788999999999998 888754 23
Q ss_pred CceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHH
Q 001531 368 PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIA 447 (1058)
Q Consensus 368 P~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia 447 (1058)
-.+|+++++++..+++-. .++..|+. . ++ ...|+...|.+-+....
T Consensus 204 ~~gG~v~~~~~~~~~l~~-------------------------~~~~~G~~-l---~p-----~~a~~~~rgl~tl~~R~ 249 (377)
T TIGR01324 204 IMIGTVVANARTWDQLRE-------------------------HSYLMGQM-V---DA-----DDAYTTLRGLRTLGVRL 249 (377)
T ss_pred ceEEEEEeCHHHHHHHHH-------------------------HHHHhCCC-C---CH-----HHHHHHHhhhhhHHHHH
Confidence 345888888765443300 00111100 0 11 11223334444455556
Q ss_pred HHHHHHHHHHHHHHhcCCCe
Q 001531 448 QRVHGLAGTFALGLKKLGTV 467 (1058)
Q Consensus 448 ~~~~~~a~~l~~~L~~~G~~ 467 (1058)
++..++|..+++.|++...+
T Consensus 250 ~~~~~~a~~la~~L~~~p~v 269 (377)
T TIGR01324 250 KQHQESSLAIAKWLSEQPEV 269 (377)
T ss_pred HHHHHHHHHHHHHHHhCCCc
Confidence 77788999999999987534
No 197
>PRK09082 methionine aminotransferase; Validated
Probab=99.69 E-value=2.8e-15 Score=175.25 Aligned_cols=344 Identities=13% Similarity=0.161 Sum_probs=210.1
Q ss_pred HHHHHHHHhcCccCcCcccccccccccCCcccccccccccccc-cccCCCCchhhhhcHHHHHHHHHHHHHHHhCCCc--
Q 001531 573 LLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSF-ANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDS-- 649 (1058)
Q Consensus 573 ~~r~~~~l~~~~~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f-~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~~-- 649 (1058)
+++.+..+.+++ +++.||.+.+.++............. ..++.|.+ .+|..++...+++++.+++|.+.
T Consensus 19 ~~~~~~~~~~~~-----~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~lr~~~a~~l~~~~~~~~~~ 90 (386)
T PRK09082 19 IFTVMSALAAEH-----GAINLSQGFPDFDGPPYLVEALAYAMAAGHNQYPP---MTGVAALREAIAAKTARLYGRQYDA 90 (386)
T ss_pred HHHHHHHHHhhC-----CEEEecCCCCCCCCCHHHHHHHHHHHHcCCCCCCC---CCCcHHHHHHHHHHHHHHhCCCCCC
Confidence 556666655432 46778877665543222221111101 01223433 46888888889999998888753
Q ss_pred -eeeecCch-HHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCC-CCCCCHHHHHHHHHh
Q 001531 650 -FSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KGNINIEELRKAAEA 726 (1058)
Q Consensus 650 -~~l~~~sG-a~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~-~g~iD~e~L~~~i~~ 726 (1058)
..+..++| +++. .++++.+. .++++|+++...|+.+...++..|.+++.++.++ ++.+|+++++++++
T Consensus 91 ~~~i~~t~G~~~al---~~~~~~~~-----~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~- 161 (386)
T PRK09082 91 DSEITVTAGATEAL---FAAILALV-----RPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAIS- 161 (386)
T ss_pred CCcEEEeCCHHHHH---HHHHHHHc-----CCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcC-
Confidence 13444445 4443 33344331 2567899999888777777888999999999974 46899999999996
Q ss_pred cCCCeEEEEEEcC-CCccccc--ccHHHHHHHHHHcCCEEEEeccCccc-ccC--cCC----CCccCCcEEEeCCccccc
Q 001531 727 NRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG--LTS----PGYIGADVCHLNLHKTFC 796 (1058)
Q Consensus 727 ~~~~taaV~vt~P-n~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~a-l~g--l~~----pg~~GaDi~~~s~hKtf~ 796 (1058)
+++++|++++| |.+|..- +++++|.++|+++|+++++|.++... ..+ ... ++..+-.++..+++|+|+
T Consensus 162 --~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~ 239 (386)
T PRK09082 162 --PRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYH 239 (386)
T ss_pred --ccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhcc
Confidence 68889999998 5789762 37999999999999999999986311 111 111 111223467778888885
Q ss_pred cCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHH
Q 001531 797 IPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI 876 (1058)
Q Consensus 797 ~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~ 876 (1058)
.| |.++|++++++++...+-.. +.....+.+...+. ++..++.. +++.+++..+...
T Consensus 240 ~~----G~RiG~iv~~~~l~~~~~~~--------------~~~~~~~~~~~~q~----~~~~~l~~-~~~~~~~~~~~~~ 296 (386)
T PRK09082 240 VT----GWKVGYCVAPAALSAEFRKV--------------HQYNTFTVNTPAQL----ALADYLRA-EPEHYLELPAFYQ 296 (386)
T ss_pred ch----hhhhhhhhCCHHHHHHHHHH--------------HhhhcCCCChHHHH----HHHHHHhC-ChHHHHHHHHHHH
Confidence 43 67899999887665433100 00011111111221 12233321 3444555555566
Q ss_pred HHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHH-HHCCccccC-CCC---C-CCCEEEEEc
Q 001531 877 LNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL-MDYGFHGPT-MSW---P-VPGTLMIEP 949 (1058)
Q Consensus 877 ~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L-~~~Gi~~~~-~~~---p-~~~~Lris~ 949 (1058)
++.+++.+.|++. +++. .+.+.++ ++++++.+ .+.+..+++++| .++|+.+.. ..| + ..+.+||++
T Consensus 297 ~~~~~~~~~L~~~~~~~~--~~~g~~~--~~~~~~~~---~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~ 369 (386)
T PRK09082 297 AKRDRFRAALANSRFKLL--PCEGTYF--QLVDYSAI---SDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCF 369 (386)
T ss_pred HHHHHHHHHHHhCCCccc--CCCeeEE--EEEecccc---CCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEe
Confidence 7888898999874 3331 1223222 44566422 145778999987 477997532 224 2 246899999
Q ss_pred CCCCCHHHHHHHHHHHHH
Q 001531 950 TESESKEELDRYCDALIS 967 (1058)
Q Consensus 950 te~~t~eeid~fi~aL~~ 967 (1058)
.. +++++++.++.|++
T Consensus 370 ~~--~~~~l~~~~~rl~~ 385 (386)
T PRK09082 370 AK--QEETLDAAAERLCQ 385 (386)
T ss_pred cC--CHHHHHHHHHHHhh
Confidence 74 57778887777754
No 198
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.69 E-value=4.5e-15 Score=170.77 Aligned_cols=280 Identities=17% Similarity=0.168 Sum_probs=185.0
Q ss_pred HHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---
Q 001531 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--- 288 (1058)
Q Consensus 212 ~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~--- 288 (1058)
...++++.+++++|.+ ++.++.+||.+.+.++.+++. +++++|+++...|+++...++. .|++++.++.
T Consensus 19 ~~~~~~~~la~~~~~~--~~~~~~sgt~al~~~l~~l~~--~~gd~vl~~~~~~~~~~~~~~~----~g~~~~~~~~~~~ 90 (352)
T cd00616 19 KVREFEKAFAEYLGVK--YAVAVSSGTAALHLALRALGI--GPGDEVIVPSFTFVATANAILL----LGATPVFVDIDPD 90 (352)
T ss_pred HHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHcCC--CCCCEEEeCCcchHHHHHHHHH----cCCeEEEEecCCC
Confidence 3557889999999975 477888999988888877643 3789999999999999887753 5788877654
Q ss_pred ------hhhhc-cCCCEeEEEEEcCCCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCC---CCcccceEEEecC--
Q 001531 289 ------KDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP---PGELGADIVVGSA-- 356 (1058)
Q Consensus 289 ------~~l~~-l~~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~---p~~~GaDivvgs~-- 356 (1058)
+++++ +++++++|++++ ++|.+.|+++|.++|+++|++++++ ..+++|.... .+.+ .|+.+.|.
T Consensus 91 ~~~~d~~~l~~~i~~~~~~v~~~~--~~G~~~~~~~i~~l~~~~~i~li~D-~a~~~g~~~~~~~~~~~-~d~~~~S~~~ 166 (352)
T cd00616 91 TYNIDPELIEAAITPRTKAIIPVH--LYGNPADMDAIMAIAKRHGLPVIED-AAQALGATYKGRKVGTF-GDAGAFSFHP 166 (352)
T ss_pred cCCcCHHHHHHhcCcCCeEEEEEC--CCCCcCCHHHHHHHHHHcCCeEEEE-CCCCCCCeECCEEcccC-cceeEEcCCC
Confidence 34555 677899999876 5899999999999999999999994 3455554322 1233 58877773
Q ss_pred -cccccccCCCCCceEEEEEe-hhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHH
Q 001531 357 -QRFGVPMGYGGPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 434 (1058)
Q Consensus 357 -k~lg~P~~~GGP~~G~l~~~-~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~y 434 (1058)
|.|+ +|..|++.++ +++.+++....-+ |..... .+.+..+.+. +..+..+.+++
T Consensus 167 ~K~~~------~~~gg~~~~~~~~~~~~~~~~~~~------~~~~~~---------~~~~~~~~~~--~~~~~~~~aa~- 222 (352)
T cd00616 167 TKNLT------TGEGGAVVTNDEELAERARLLRNH------GRDRDR---------FKYEHEILGY--NYRLSEIQAAI- 222 (352)
T ss_pred CCCCc------ccCceEEEECCHHHHHHHHHHHHc------CCCCCC---------Cccccceeee--ccCcCHHHHHH-
Confidence 6553 2233666665 4665544211000 100000 0011111110 01111222222
Q ss_pred HHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCC-----CccEEEEecC---C--HHHHHHHHHHcCceeeecc-
Q 001531 435 AVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP-----FFDTVKVKCA---D--AHAIASAAYKIEMNLRVVD- 503 (1058)
Q Consensus 435 l~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~-----~~~~v~i~~~---~--~~~l~~~L~~~GI~~~~~~- 503 (1058)
.....++++++.++..++++++++.|.++.|++++..+ ....+.|.++ + ..++.+.|.++||.++...
T Consensus 223 -~~~~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~~~~ 301 (352)
T cd00616 223 -GLAQLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIETRVHYP 301 (352)
T ss_pred -HHHHHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeeeecC
Confidence 12233467888889999999999999997448877421 1123455444 3 7899999999999653210
Q ss_pred --------------------------CCeEEEEeccCCCHHHHHHHHHHHh
Q 001531 504 --------------------------SNTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 504 --------------------------~~~lris~~~~~t~edid~ll~al~ 528 (1058)
.+.+|++++.++|++|+++++++|+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 302 PLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred ccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 1579999999999999999999873
No 199
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.69 E-value=8.6e-15 Score=171.03 Aligned_cols=273 Identities=16% Similarity=0.141 Sum_probs=187.1
Q ss_pred HHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---
Q 001531 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1058)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~--- 289 (1058)
..++++.+|++.|.+. +.++.+|++++.+++..+ ++||+||+++..|+++...+...++..|+++++++.+
T Consensus 56 ~~~le~~lA~l~g~~~--~v~~~sG~~ai~~~l~~l----~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~ 129 (390)
T PRK08064 56 REALEDIIAELEGGTK--GFAFASGMAAISTAFLLL----SKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMTNLE 129 (390)
T ss_pred HHHHHHHHHHHhCCCC--eEEECCHHHHHHHHHHHh----CCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCCCHH
Confidence 4457789999999874 667888988877665422 3799999999999998888877677789999998864
Q ss_pred hhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCC
Q 001531 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1058)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1058)
++++ ++++|++|++.+| |.+|.+.|+++|.++||++|++++|| ...+.+....|.++|+|+++.|+ |.+++|.+
T Consensus 130 ~l~~~l~~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD-~a~~~~~~~~~~~~g~Divv~S~tK~~~G~~~-- 206 (390)
T PRK08064 130 EVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVD-NTFLTPLLQKPLDLGADVVLHSATKFLAGHSD-- 206 (390)
T ss_pred HHHHhcCCCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEE-CCCCcccccCchhhCCcEEEeecceeccCCcc--
Confidence 4555 7788999999998 68999999999999999999999995 34555555556789999999998 77764421
Q ss_pred CCceEEEEEeh-hhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHH
Q 001531 367 GPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1058)
Q Consensus 367 GP~~G~l~~~~-~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ 445 (1058)
--+|++++++ ++.+++.. .+.. .+++. .+ .-+ |+...|-+-+..
T Consensus 207 -~laG~~v~~~~~~~~~l~~-------------------------~~~~---~g~~~-~~---~~a--~l~~~gl~tl~~ 251 (390)
T PRK08064 207 -VLAGLAVVKDEELAQKLYF-------------------------LQNS---FGAVL-GV---QDC--WLVLRGLKTLHV 251 (390)
T ss_pred -ceeEEEEeCCHHHHHHHHH-------------------------HHHh---cCCCC-CH---HHH--HHHHcccCcHHH
Confidence 1247777753 45444310 0000 01110 00 111 123344444556
Q ss_pred HHHHHHHHHHHHHHHHhcCCCe-EEcCC-----C-----------CccEEEEecCCHHHHHHHHHHcCce-----ee---
Q 001531 446 IAQRVHGLAGTFALGLKKLGTV-EVQGL-----P-----------FFDTVKVKCADAHAIASAAYKIEMN-----LR--- 500 (1058)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~G~~-~l~~~-----~-----------~~~~v~i~~~~~~~l~~~L~~~GI~-----~~--- 500 (1058)
..++..+++..+.+.|++.+.+ +++-+ + +...|+|.+.+..++.+.+...++. ++
T Consensus 252 R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~f~~~l~l~~~~~s~G~~~ 331 (390)
T PRK08064 252 RLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQSEEAVRQFVSHVKLPVFAVSLGAVE 331 (390)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCCcceEcccCCCCc
Confidence 7777888999999999987533 22211 1 1124677776534444444444551 11
Q ss_pred ---------------e-------ccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 501 ---------------V-------VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 501 ---------------~-------~~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
. +.++.+|+|+...++++.|++|.++|..
T Consensus 332 sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~ 382 (390)
T PRK08064 332 SILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSY 382 (390)
T ss_pred ceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHh
Confidence 0 1247899999999999999999999964
No 200
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.69 E-value=6.4e-15 Score=174.92 Aligned_cols=327 Identities=18% Similarity=0.241 Sum_probs=208.4
Q ss_pred cccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCC-ceeeecCchHHHHHHHHHHHH
Q 001531 591 MIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIR 669 (1058)
Q Consensus 591 ~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~-~~~l~~~sGa~ge~a~llair 669 (1058)
...+|+|.+++..++..+.....-+..+.+ .+...++.+.|++++..+ ...++.++|++++++++..+|
T Consensus 93 ~~~lGH~~p~v~~Ai~~ql~~l~~~~~~~~----------~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr 162 (459)
T PRK11522 93 IFNVGHRNPVVVSAVQNQLAKQPLHSQELL----------DPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAK 162 (459)
T ss_pred hhhcCCCCHHHHHHHHHHHhhCcccccccC----------CHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHHHHH
Confidence 345788887777666665321111111111 123457788888887532 234678899999998888888
Q ss_pred HHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCCcE------------EEEEcCCCCCCCCHHHHHHHHHh---cCCCeEE
Q 001531 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMK------------IVSVGTDAKGNINIEELRKAAEA---NRDNLST 733 (1058)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G~~------------vv~V~~d~~g~iD~e~L~~~i~~---~~~~taa 733 (1058)
.|...+| |.+|| ...++||....+....|-. +..+|+ .|.+++++++++ +++++++
T Consensus 163 ~~t~~~g---r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~~~~iAa 234 (459)
T PRK11522 163 AYQSPRG---KFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPF-----GNIEAMRTALSECKKTGDDVAA 234 (459)
T ss_pred HHhccCC---CcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCC-----CCHHHHHHHHHHhhccCCcEEE
Confidence 8753222 44555 4578999877665433311 222332 378889988864 3467888
Q ss_pred EEEEcC-CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc------C--CcEEEeCCccccccCCCC
Q 001531 734 LMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNLHKTFCIPHGG 801 (1058)
Q Consensus 734 V~vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~------G--aDi~~~s~hKtf~~P~g~ 801 (1058)
|+++.- +..|++.+ .++++.++|++||+++|+|+++ .|+.+.|.+ | +|++++ .|.+ |+
T Consensus 235 vIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~----tG~GRtG~~~a~e~~gv~PDivt~--gK~l----gg 304 (459)
T PRK11522 235 VILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQ----TGMGRTGKMFACEHENVQPDILCL--AKAL----GG 304 (459)
T ss_pred EEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccce----ecCCccchhhhhhccCCCCCEEEe--chhh----hC
Confidence 888753 45677752 3999999999999999999995 355566543 3 688765 4765 34
Q ss_pred C-CCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHH
Q 001531 802 G-GPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNAN 880 (1058)
Q Consensus 802 G-GPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~ 880 (1058)
| -| +|.+++++++...+....+ ...+++.|+++.++++.+.|..+-++++. ++...+.+
T Consensus 305 G~~P-igav~~~~~i~~~~~~~~~----------------~~~~T~~gnp~~~Aaala~L~~i~~~~l~---~~~~~~g~ 364 (459)
T PRK11522 305 GVMP-IGATIATEEVFSVLFDNPF----------------LHTTTFGGNPLACAAALATINVLLEQNLP---AQAEQKGD 364 (459)
T ss_pred CCcc-ceeEEEcHHHHHHhccCCc----------------ccCCCCCCCHHHHHHHHHHHHHHhcchHH---HHHHHHHH
Confidence 4 25 4555555555433211000 01122456778888888889988776654 44556788
Q ss_pred HHHHHHhcc---CC-ee--eccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCC
Q 001531 881 YMAKRLEKH---YP-IL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESES 954 (1058)
Q Consensus 881 yL~~~L~~~---~~-v~--~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t 954 (1058)
||.++|+++ ++ ++ +.|. |.. +-+.+.. ......+.+.|.++|+.+.... +..+.+|++|+..+|
T Consensus 365 ~l~~~L~~l~~~~~~~i~~VrG~-Gl~---~giel~~-----~~~~~~i~~~l~~~Gvl~~~~~-~~~~~lr~~Ppl~~t 434 (459)
T PRK11522 365 YLLDGFRQLAREYPDLVQEARGK-GML---MAIEFVD-----NEIGYNFASEMFRQRVLVAGTL-NNAKTIRIEPPLTLT 434 (459)
T ss_pred HHHHHHHHHHHhCCCceeeEEec-eeE---EEEEecC-----chHHHHHHHHHHHCCeEEEecC-CCCCEEEEECCccCC
Confidence 999988764 33 21 2231 222 2233321 1125678999999999875321 124789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 001531 955 KEELDRYCDALISIREEIAQI 975 (1058)
Q Consensus 955 ~eeid~fi~aL~~i~~e~~~~ 975 (1058)
++|||+++++|.+++.++.+.
T Consensus 435 ~~~id~~l~~l~~~l~~~~~~ 455 (459)
T PRK11522 435 IEQCEQVLKAARKALAAMRVS 455 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999887763
No 201
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.69 E-value=5.9e-15 Score=169.98 Aligned_cols=274 Identities=18% Similarity=0.186 Sum_probs=182.0
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 001531 207 QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 286 (1058)
Q Consensus 207 qG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v 286 (1058)
.|..+...++++.+++++|.+. ..++.+|+.++.+++.++ . ++||+|++++..|+++...++. .|++++.+
T Consensus 57 ~g~~~~~~~l~~~la~~~~~~~--~i~~~~G~~~~~~~l~~~-~--~~gd~v~~~~~~~~~~~~~~~~----~g~~~~~~ 127 (360)
T TIGR00858 57 SGNSPLHEELEEELAEWKGTEA--ALLFSSGYLANVGVISAL-V--GKGDLILSDALNHASLIDGCRL----SGARVRRY 127 (360)
T ss_pred cCCcHHHHHHHHHHHHHhCCCC--EEEECchHHHHHHHHHHh-C--CCCCEEEEEccccHHHHHHHHh----cCCceEEe
Confidence 3444456668899999999653 456666676666555544 2 3799999999999999887653 46666665
Q ss_pred C---chhhhc-cC----CCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCC----------Ccc
Q 001531 287 D---LKDIDY-KS----GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP----------GEL 347 (1058)
Q Consensus 287 ~---~~~l~~-l~----~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p----------~~~ 347 (1058)
+ ++++++ ++ +++++|++.++ |.+|.+.|+++|.++|+++|+++++| +.++.+.+... ...
T Consensus 128 ~~~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~D-e~~~~~~~~~~~~~~~~~~~~~~~ 206 (360)
T TIGR00858 128 RHNDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVD-DAHGTGVLGEDGRGTLEHFGLKPE 206 (360)
T ss_pred cCCCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEE-CcccccCcCCCCCchHHhcCCCcc
Confidence 4 456665 43 34677777766 68999999999999999999999994 44454433211 123
Q ss_pred cceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHH
Q 001531 348 GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL 426 (1058)
Q Consensus 348 GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l 426 (1058)
+.||+++|. |.|+. ++ |++..++++.+.+... .+.+ ..+. -+++...
T Consensus 207 ~~~i~i~s~sK~~~~------~g-G~~~~~~~~~~~~~~~----------~~~~--------------~~~~-~~~~~~~ 254 (360)
T TIGR00858 207 PVDIQVGTLSKALGS------YG-AYVAGSQALIDYLINR----------ARTL--------------IFST-ALPPAVA 254 (360)
T ss_pred CCcEEEEechhhhhc------cC-cEEEcCHHHHHHHHHh----------Cccc--------------eecC-CCCHHHH
Confidence 779999987 87753 22 6888887776554100 0000 0000 0112223
Q ss_pred HHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC---HHHHHHHHHHcCceeeec-
Q 001531 427 LANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV- 502 (1058)
Q Consensus 427 ~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~---~~~l~~~L~~~GI~~~~~- 502 (1058)
.+..+++ .++. .++++.++..++.+++.+.|+++| +++.... ...+.+..+. ..++.++|.++||.+...
T Consensus 255 ~a~~~al--~~~~--~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~ 328 (360)
T TIGR00858 255 AAALAAL--ELIQ--EEPWRREKLLALIARLRAGLEALG-FTLMPSC-TPIVPVIIGDNASALALAEELQQQGIFVGAIR 328 (360)
T ss_pred HHHHHHH--HHHh--hCHHHHHHHHHHHHHHHHHHHHcC-CccCCCC-CCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeC
Confidence 3333443 2222 235678889999999999999987 7765321 2234455543 678999999999988531
Q ss_pred ------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001531 503 ------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 503 ------~~~~lris~~~~~t~edid~ll~al~ 528 (1058)
..+.+|++++.+++++|+++++++|+
T Consensus 329 ~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 329 PPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred CCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 12589999999999999999999873
No 202
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.69 E-value=8e-15 Score=171.52 Aligned_cols=288 Identities=20% Similarity=0.257 Sum_probs=184.6
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEE-cCCCCCccHHHHHhCCcEEEE---EcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGMKIVS---VGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vli-p~saHg~~pa~a~~~G~~vv~---V~~ 709 (1058)
..++.++|+++++.+. .+..++|++++++++.++|.|+..+|+.++++||+ ..++||.........|..... .+.
T Consensus 75 ~~~la~~l~~~~~~~~-v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 153 (389)
T PRK01278 75 QERLAERLVENSFADK-VFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPL 153 (389)
T ss_pred HHHHHHHHHhhCCCCE-EEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCC
Confidence 4478889999887664 36678899999888888888876677555667776 457888776665443332111 011
Q ss_pred CCCC----CCCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc---ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCc
Q 001531 710 DAKG----NINIEELRKAAEANRDNLSTLMVTYPS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY 781 (1058)
Q Consensus 710 d~~g----~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~ 781 (1058)
.++. ..|+++++++++ +++++|+++.++ ..|... +++++|+++|++||+++++|+++. |+.+.|.
T Consensus 154 ~~~~~~~~~~d~~~l~~~l~---~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~----g~g~~g~ 226 (389)
T PRK01278 154 VPGFDQVPFGDIEALKAAIT---PNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQC----GMGRTGK 226 (389)
T ss_pred CCCceEeCCCCHHHHHHhhC---CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc----CCCcCCc
Confidence 1111 158999999996 689999998654 456322 369999999999999999999864 3333221
Q ss_pred ------cC--CcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHH
Q 001531 782 ------IG--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (1058)
Q Consensus 782 ------~G--aDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~ 853 (1058)
+| .|++++ .|.++ +|..+|++++++++.+.+.... .....+ ++...+
T Consensus 227 ~~~~~~~~~~pdi~t~--sK~l~-----~G~~ig~~~~~~~~~~~~~~~~--------------~~~t~~----~~~~~~ 281 (389)
T PRK01278 227 LFAHEWAGVTPDIMAV--AKGIG-----GGFPLGACLATEEAAKGMTPGT--------------HGSTYG----GNPLAM 281 (389)
T ss_pred ceeecccCCCCCEEEE--ehhcc-----CCcceEEEEEcHHHHhccCCCC--------------CCCCCC----ccHHHH
Confidence 23 566544 58774 4577899999877765542110 001112 234444
Q ss_pred HHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CC-ee--eccCCCccceEEEEecccccccCCCCHHHHHHHH
Q 001531 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YP-IL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL 927 (1058)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~---~~-v~--~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L 927 (1058)
+++.+.+..+-.+++. ++...+.++++++|++. ++ +. ..+ .+.. +.+.+. .+..++.++|
T Consensus 282 aaa~a~l~~l~~~~~~---~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g-~G~~---~~i~~~-------~~~~~~~~~l 347 (389)
T PRK01278 282 AVGNAVLDVILAPGFL---DNVQRMGLYLKQKLEGLVDRFPDVIEEVRG-KGLL---LGLKCV-------VPNRDLVQAL 347 (389)
T ss_pred HHHHHHHHHHhhhHHH---HHHHHHHHHHHHHHHHHHhhCCCceeeEec-ccEE---EEEEEe-------cCHHHHHHHH
Confidence 5555666665443333 23345566777777653 22 21 111 1211 223332 2467899999
Q ss_pred HHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 928 MDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 928 ~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
.++|+.+.... .+.+||+|+...++++|+++++.|++++++
T Consensus 348 ~~~GV~~~p~~---~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 348 RDEGLLTVGAG---DNVVRLLPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred HHCCeEEeecC---CCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 99999853222 478999999888999999999999887654
No 203
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.68 E-value=5.4e-15 Score=171.97 Aligned_cols=242 Identities=18% Similarity=0.187 Sum_probs=170.3
Q ss_pred HHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---
Q 001531 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1058)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~--- 289 (1058)
..++++.+|+++|.+. +.++.+|++++.+++. + + ++||+||++...|+++...++..++..|+++++++..
T Consensus 49 ~~~le~~la~l~g~~~--~l~~~sG~~al~~~l~-l-l--~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~~ 122 (378)
T TIGR01329 49 RTALESLLAKLDKADR--AFAFSSGMAALDVITR-L-L--NNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTTDLD 122 (378)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHH-H-h--CCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCCCHH
Confidence 4567899999999854 7788899887665443 2 2 3899999999999999988877677789999999864
Q ss_pred hhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCC
Q 001531 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1058)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1058)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|| +.++.+....|.++|+|++++|+ |.+++|.
T Consensus 123 ~le~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD-~a~~~~~~~~~l~~g~Di~v~S~tK~l~G~~--- 198 (378)
T TIGR01329 123 KVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVD-NTMMSPLLCNPLELGADIVYHSATKFLAGHS--- 198 (378)
T ss_pred HHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEE-CCCcccccCChhhcCCcEEEEecceeccCCc---
Confidence 5555 7889999999998 78999999999999999999999994 35556666667789999999998 7776432
Q ss_pred CCceEEEEEehh-hhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHH
Q 001531 367 GPHAAFLATSQE-YKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1058)
Q Consensus 367 GP~~G~l~~~~~-~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ 445 (1058)
+.-+|+++++++ +.+++. .+|+..|+ +. .+. .+ |+...+.+-+..
T Consensus 199 ~~~~G~v~~~~~~~~~~~~-------------------------~~~~~~G~---~~-~~~---~a--~l~~~~l~tl~~ 244 (378)
T TIGR01329 199 DVMAGVLAVKGEEIAKKVY-------------------------FLQNSTGS---GL-APF---DC--WLLLRGIKTLAI 244 (378)
T ss_pred cceeEEEEeCcHHHHHHHH-------------------------HHHHhcCC---cC-CHH---HH--HHHHccCCCHHH
Confidence 122688888653 323321 01111110 00 111 11 334566677788
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeE-Ec-C---C-C-----------CccEEEEecCC---HHHHHHHHHHcCce
Q 001531 446 IAQRVHGLAGTFALGLKKLGTVE-VQ-G---L-P-----------FFDTVKVKCAD---AHAIASAAYKIEMN 498 (1058)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~G~~~-l~-~---~-~-----------~~~~v~i~~~~---~~~l~~~L~~~GI~ 498 (1058)
..++...++..+++.|++...++ +. . . | +...|+|.+.+ +.++.+.|...+|.
T Consensus 245 R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~~~~~~~~~L~~~~i~ 317 (378)
T TIGR01329 245 RIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVALSKRLVEATKLFSIT 317 (378)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCcCcccc
Confidence 88888899999999998764332 22 1 1 1 11246777654 56788888655553
No 204
>PLN02624 ornithine-delta-aminotransferase
Probab=99.68 E-value=1.4e-14 Score=173.18 Aligned_cols=292 Identities=21% Similarity=0.318 Sum_probs=187.5
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHH-cCCC-CCCEEE-EcCCCCCccHHHHHhCCc--------
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKA-RGDH-HRNVCI-IPVSAHGTNPATAAMCGM-------- 702 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~-~G~~-~r~~Vl-ip~saHg~~pa~a~~~G~-------- 702 (1058)
..++.+.|++++|++.+ ++.++|++++++++..+|.|+.. +|.. ++.+|+ ...+.||....+..+.|-
T Consensus 119 ~~~la~~L~~~~~~~~~-~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~ 197 (474)
T PLN02624 119 FPEFAEYLTSMFGYDMV-LPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFG 197 (474)
T ss_pred HHHHHHHHHhhcCCCeE-EEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCC
Confidence 44788899999988754 56789999998888888887532 2321 233444 456789876555432211
Q ss_pred ----EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-Ccccccc---cHHHHHHHHHHcCCEEEEeccCccccc
Q 001531 703 ----KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQV 774 (1058)
Q Consensus 703 ----~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~ 774 (1058)
.+..++. .|++.|++.++.+.+++++|+++.+. ..|.+.+ .+++|.++|++||+++++|+++.
T Consensus 198 ~~~~~~~~~~~-----~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~t---- 268 (474)
T PLN02624 198 PLLPGHLKVDF-----GDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQT---- 268 (474)
T ss_pred CCCCCceEeCC-----CCHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc----
Confidence 1234443 37899999997666789999998874 6787652 29999999999999999999964
Q ss_pred CcCCCCc--------cCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCC-CCCCcccCCCCCCCCCCCCCCCCCcc
Q 001531 775 GLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL-PSHPVVSTGGIPAPEKSQPLGTIAAA 845 (1058)
Q Consensus 775 gl~~pg~--------~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~l-pg~~vg~~~d~g~~~~~~~t~~i~sa 845 (1058)
|+.+.|. ..+|++++ .|.| ++|+..+|++++++++...+ ++.. ...
T Consensus 269 G~GrtG~~~a~~~~~i~pDiv~l--sK~l----ggG~~pigav~~~~~i~~~~~~~~~---------------~~T---- 323 (474)
T PLN02624 269 GLARTGKMLACDWEEVRPDVVIL--GKAL----GGGVIPVSAVLADKDVMLCIKPGEH---------------GST---- 323 (474)
T ss_pred CcCcCcchhhHHhcCCCCCEEEe--cccc----cCCCCcceeeeecHHHHhHhccCCc---------------CCC----
Confidence 3333332 23677775 4765 45656788888887655433 1110 011
Q ss_pred chhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CC-ee--eccCCCccceEEEEecccccccCCCC
Q 001531 846 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YP-IL--FRGVNGTVAHEFIVDLRGLKNTAGIE 919 (1058)
Q Consensus 846 ~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~---~~-v~--~~g~~~~~~~e~vv~~~~~~~~~g~~ 919 (1058)
+.++.+.++++.+.+..+..+++.+ +...+.++++++|+++ ++ ++ ..| .| .+..+.++.... ....
T Consensus 324 ~~g~pl~~aaa~aaLe~l~~~~l~~---~~~~~~~~l~~~L~~l~~~~~~~i~~vrg-~G-~~~~i~l~~~~~---~~~~ 395 (474)
T PLN02624 324 FGGNPLASAVAMAALQVVQDEKLAE---RSAKLGQELRDQLQKIQKQFPKLIKEVRG-RG-LLNAVVLNSPKL---GPVS 395 (474)
T ss_pred CCCCHHHHHHHHHHHHHHHhchHHH---HHHHHHHHHHHHHHHHHHhCCCceEEEEe-eE-EEEEEEecCCCc---ChHH
Confidence 1234455555666666665555443 3345566777777653 22 11 122 12 222233332110 0123
Q ss_pred HHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 920 PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 920 ~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
..++.+.|.++|+.+.... .+.|||+|+..+|++|||++++.|++++++
T Consensus 396 a~~~~~~L~e~GV~v~p~~---~~~lR~~p~l~~t~e~id~~l~~L~~~l~~ 444 (474)
T PLN02624 396 AYDVCLKLKERGLLAKPTH---DTIIRLAPPLSISEDELQECSKALSDVLEH 444 (474)
T ss_pred HHHHHHHHHhCCeEEecCC---CCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 5689999999999874322 478999999999999999999999988765
No 205
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.68 E-value=1.2e-14 Score=170.82 Aligned_cols=290 Identities=17% Similarity=0.214 Sum_probs=188.1
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCCcE---------
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMK--------- 703 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G~~--------- 703 (1058)
..++.+.|+++++.+. .++.++|++++++++.++|.|...++..++++|+ ...++||.........|..
T Consensus 83 ~~~la~~l~~~~~~~~-v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~ 161 (406)
T PRK12381 83 VLRLAKKLIDATFADR-VFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPL 161 (406)
T ss_pred HHHHHHHHHhhCCCCe-EEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCC
Confidence 4478899999988764 4778899999999999999886544433455665 4678899876554433321
Q ss_pred ---EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc---ccHHHHHHHHHHcCCEEEEeccCcccccCc
Q 001531 704 ---IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGL 776 (1058)
Q Consensus 704 ---vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~gl 776 (1058)
++.++. .|++++++.++ +++++|+++.-+ +.|++. ..+++|.++|++||+++++|+++. |+
T Consensus 162 ~~~~~~~~~-----~d~~~l~~~l~---~~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~t----G~ 229 (406)
T PRK12381 162 PPDIRHAAY-----NDLNSASALID---DQTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQT----GV 229 (406)
T ss_pred CCCeeEeCC-----CCHHHHHHhcc---CCeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhh----CC
Confidence 233333 48999999996 689888886323 345442 368999999999999999999863 23
Q ss_pred CCCCc------c--CCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchh
Q 001531 777 TSPGY------I--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 848 (1058)
Q Consensus 777 ~~pg~------~--GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g 848 (1058)
.+.|. + .+|++++ .|.++ ||..+|++.+++++.+.+.... .....+ +
T Consensus 230 gr~G~~~~~~~~~v~pDi~t~--sK~l~-----gG~~ig~~~~~~~~~~~~~~~~--------------~~~t~~----~ 284 (406)
T PRK12381 230 GRTGELYAYMHYGVTPDVLTT--AKALG-----GGFPIGAMLTTEKCASVMTVGT--------------HGTTYG----G 284 (406)
T ss_pred CCCcchhhhHhhCCCCCEEEe--hhhhh-----CCCceEEEEEcHHHHhhcCCCC--------------CCCCCC----C
Confidence 23332 2 3566543 57664 4567899999887766542110 001112 3
Q ss_pred hHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCccceEEEEecccccccCCCCHHHH
Q 001531 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDV 923 (1058)
Q Consensus 849 ~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v 923 (1058)
+++.++++.+.+..+..+.+ .++..++.+++.++|++. +.+. ..| .| .+ +.+.+.+ ........+
T Consensus 285 ~pl~~aaa~a~l~~l~~~~~---~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg-~G-l~--~~~~l~~---~~~~~~~~~ 354 (406)
T PRK12381 285 NPLASAVAGKVLELINTPEM---LNGVKQRHDWFVERLNTINARYGLFSEIRG-LG-LL--IGCVLNA---EYAGKAKQI 354 (406)
T ss_pred CHHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHHHHHHHHhhCCCEEEEec-Ce-EE--EEEEecC---chhhHHHHH
Confidence 44445555565666544433 344556778888888764 3221 111 12 11 2333321 001135688
Q ss_pred HHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001531 924 AKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1058)
Q Consensus 924 ~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~~ 974 (1058)
.+.|.++|+.+.... ++.+||+|+..+|++|||++++.|.+++.++..
T Consensus 355 ~~~l~~~Gv~v~~~g---~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~~ 402 (406)
T PRK12381 355 SQEAAKAGVMVLIAG---PNVVRFAPALNISEEEITTGLDRFARACERFVS 402 (406)
T ss_pred HHHHHHCCcEEeeCC---CCEEEEeCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 899999999874322 378999999999999999999999999877643
No 206
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.68 E-value=7.1e-15 Score=171.90 Aligned_cols=295 Identities=14% Similarity=0.119 Sum_probs=182.2
Q ss_pred HHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCC
Q 001531 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1058)
Q Consensus 633 ~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~ 712 (1058)
...++++.+++++|.+.+ +..++|..+..+++.++. +++|+|++++..|++....+.+.+++++.++.
T Consensus 44 ~~~~LE~~lA~~~g~e~a-l~~~sG~~a~~~~i~~l~--------~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~--- 111 (392)
T PLN03227 44 AHLELEQCMAEFLGTESA-ILYSDGASTTSSTVAAFA--------KRGDLLVVDRGVNEALLVGVSLSRANVRWFRH--- 111 (392)
T ss_pred HHHHHHHHHHHHhCCCcE-EEecCcHHHHHHHHHHhC--------CCCCEEEEeccccHHHHHHHHHcCCeEEEeCC---
Confidence 456899999999999854 555566555544444331 36789999998887665556777888888876
Q ss_pred CCCCHHHHHHHHHhc-----------CCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCC-
Q 001531 713 GNINIEELRKAAEAN-----------RDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP- 779 (1058)
Q Consensus 713 g~iD~e~L~~~i~~~-----------~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~p- 779 (1058)
.|++++++.++.. .++++.|++..+ |..|.+. |+++|+++|+++|+++++|+++.. +.+.+.
T Consensus 112 --~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~-~l~~i~~l~~~~g~~livDe~~~~--g~~g~~G 186 (392)
T PLN03227 112 --NDMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLA-PLKELVALKEEFHYRLILDESFSF--GTLGKSG 186 (392)
T ss_pred --CCHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCccc-CHHHHHHHHHHcCCEEEEECcccc--cccCCCC
Confidence 3556665544322 236888888887 4678887 799999999999999999999753 222221
Q ss_pred ----------CccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhh
Q 001531 780 ----------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (1058)
Q Consensus 780 ----------g~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~ 849 (1058)
...|+|+++++++|.+ ||.+|++++++++.+.+... +. ....+++. +
T Consensus 187 ~g~~~~~g~~p~~~~Div~~slsk~~-------g~~gg~v~~~~~~~~~~~~~--~~------------~~~~~~~~--~ 243 (392)
T PLN03227 187 RGSLEHAGLKPMVHAEIVTFSLENAF-------GSVGGMTVGSEEVVDHQRLS--GS------------GYCFSASA--P 243 (392)
T ss_pred CcHHHHcCCCCCCCceEEEeechhhh-------hccCcEEecCHHHHHHHHHh--Cc------------CccccCCC--C
Confidence 1346799999988876 36667888777655432100 00 00011100 1
Q ss_pred HHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCee--ecc-------CCCccceEEEEecccccccC---
Q 001531 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPIL--FRG-------VNGTVAHEFIVDLRGLKNTA--- 916 (1058)
Q Consensus 850 ~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~--~~g-------~~~~~~~e~vv~~~~~~~~~--- 916 (1058)
+..+.++.+.+..+-. ..+..++..++++||+++|++. ++.+ ..| ..++ .+.+.+.+.+...
T Consensus 244 p~~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~~~---i~~i~~~~~~~~~~~~ 318 (392)
T PLN03227 244 PFLAKADATATAGELA--GPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPISP---IIYLRLSDQEATRRTD 318 (392)
T ss_pred HHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCCC---EEEEEeCCHHHhhhhh
Confidence 2222222222322211 1234556678899999999752 3211 001 0111 1223332100000
Q ss_pred -CCCHHHHHHHHHHCCccccCC------CCC-C-CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 917 -GIEPEDVAKRLMDYGFHGPTM------SWP-V-PGTLMIEPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 917 -g~~~~~v~k~L~~~Gi~~~~~------~~p-~-~~~Lris~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
.....++.++|+++|+.+... .+| + +..+|++++..+|++|||+++++|+++++++
T Consensus 319 ~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~~ 383 (392)
T PLN03227 319 ETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAVEAI 383 (392)
T ss_pred hhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 001258899999999986321 112 1 5789999999999999999999999998775
No 207
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.68 E-value=4.4e-15 Score=173.73 Aligned_cols=299 Identities=14% Similarity=0.156 Sum_probs=187.8
Q ss_pred hcHHHHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHH----HHH--HcCCCCCCEEEEcCCCCCccHHHHHhC-
Q 001531 628 QGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRA----YHK--ARGDHHRNVCIIPVSAHGTNPATAAMC- 700 (1058)
Q Consensus 628 qG~~~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~----y~~--~~G~~~r~~Vlip~saHg~~pa~a~~~- 700 (1058)
.|+.....++++.|++++|.+.+ +..++|-+++.+++-++-. .+. ....++.+.|+.....|.+--..+.+.
T Consensus 143 ~G~~~~h~~LE~~LA~f~g~e~a-ll~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~ 221 (476)
T PLN02955 143 CGYTTYHRLLESSLADLKKKEDC-LVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAE 221 (476)
T ss_pred ccChHHHHHHHHHHHHHHCCCcE-EEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhcc
Confidence 35555667899999999999986 4556787777655544410 000 001124455666666665444445555
Q ss_pred ---CcEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCc
Q 001531 701 ---GMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL 776 (1058)
Q Consensus 701 ---G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl 776 (1058)
+.+++.++. .|+++|+++++++.++.+.|++..- +..|.+- ++++|.++|++||++++||++|..+..|.
T Consensus 222 ~~~~a~~~~f~H-----ND~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdia-pL~eL~~L~~~~ga~LiVDEAH~~Gv~G~ 295 (476)
T PLN02955 222 RQGNVEVFVYRH-----CDMYHLNSLLSSCKMKRKVVVTDSLFSMDGDFA-PMEELSQLRKKYGFLLVIDDAHGTFVCGE 295 (476)
T ss_pred ccCCceEEEeCC-----CCHHHHHHHHHhCCCCceEEEEeCCCCCCCCcC-CHHHHHHHHHHcCcEEEEcccccCceecC
Confidence 577777776 7999999999876666665555432 5678887 79999999999999999999986433222
Q ss_pred CCCC---cc----CCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhh
Q 001531 777 TSPG---YI----GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (1058)
Q Consensus 777 ~~pg---~~----GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~ 849 (1058)
.--| .+ ..||++.++.|.|+. .+|++++++++++++-.. + + +.+.++. ..
T Consensus 296 ~G~G~~e~~g~~~di~ii~~TLsKA~G~-------~GGfi~gs~~~~~~l~~~--~---------~----~~ifSta-lp 352 (476)
T PLN02955 296 NGGGVAEEFNCEADVDLCVGTLSKAAGC-------HGGFIACSKKWKQLIQSR--G---------R----SFIFSTA-IP 352 (476)
T ss_pred CCCcHHHHhCCCCCCcEEEEeCccchhc-------cCceeecHHHHHHHHHHh--C---------C----CCeeccc-cc
Confidence 1011 12 468899999998742 247899887666554211 0 0 1111110 01
Q ss_pred HHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHH
Q 001531 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD 929 (1058)
Q Consensus 850 ~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~ 929 (1058)
..+++++.+.+..+-.+ .+..++..++.+|+++.+ .+.+ . .|. +.+-+. ....+..++++|.+
T Consensus 353 p~~aaa~laal~l~~~~--~~~r~~L~~n~~~fr~~~--G~~~--~---sPI---~pI~ig-----~~~~a~~~~~~L~~ 415 (476)
T PLN02955 353 VPMAAAAYAAVVVARKE--KWRRKAIWERVKEFKALS--GVDI--S---SPI---ISLVVG-----NQEKALKASRYLLK 415 (476)
T ss_pred HHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHhc--CCCC--C---CCE---EEEEeC-----CHHHHHHHHHHHHH
Confidence 12222233333333222 124456668888888742 2332 1 122 222221 11346788999999
Q ss_pred CCccccCCCCC-CC---CEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001531 930 YGFHGPTMSWP-VP---GTLMIEPTESESKEELDRYCDALISIREEIA 973 (1058)
Q Consensus 930 ~Gi~~~~~~~p-~~---~~Lris~te~~t~eeid~fi~aL~~i~~e~~ 973 (1058)
+||++..+.|| ++ ..|||+++-.+|++|||+++++|.++.+...
T Consensus 416 ~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~~ 463 (476)
T PLN02955 416 SGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFDN 463 (476)
T ss_pred CCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 99999888887 43 3699999999999999999999998866543
No 208
>PRK05965 hypothetical protein; Provisional
Probab=99.68 E-value=2.4e-14 Score=170.44 Aligned_cols=344 Identities=15% Similarity=0.165 Sum_probs=211.7
Q ss_pred ccccccccCCcccccccccccccccc-cCCCCchhhhhcHHHHHHHHHHHHHHHhC--CCceeeecCchHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVI 668 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~qG~~~~~~el~~~lael~G--~~~~~l~~~sGa~ge~a~llai 668 (1058)
..+|++.+.+..++..+. ....+.. +..+. .+...++.+.|++++. ++. .++.++|++++++++..+
T Consensus 58 ~~lGh~~p~i~~Ai~~q~-~~~~~~~~~~~~~--------~~~~~~lae~L~~~~p~~~~~-v~f~~sGSEAve~AlKlA 127 (459)
T PRK05965 58 VNVGYGQESIVEAAAEQM-RELPYATGYFHFG--------SEPAIRLAAKLAERAPGSLNH-VYFTLGGSDAVDSAVRFI 127 (459)
T ss_pred ccCCCCCHHHHHHHHHHH-HhcCCcccccccC--------CHHHHHHHHHHHhhCCCCcCE-EEEeCChhHHHHHHHHHH
Confidence 367888877777666652 2222211 10011 1224478888999874 333 466789999999999999
Q ss_pred HHHHHHcCCCCCCEEE-EcCCCCCccHHHHHhC---------Cc---EEEEEcCCCC----CCCC--------HHHHHHH
Q 001531 669 RAYHKARGDHHRNVCI-IPVSAHGTNPATAAMC---------GM---KIVSVGTDAK----GNIN--------IEELRKA 723 (1058)
Q Consensus 669 r~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~---------G~---~vv~V~~d~~----g~iD--------~e~L~~~ 723 (1058)
|.|...+|..+|.+|| ...++||..-.+.... |. .+..++.... ..-| ++++++.
T Consensus 128 r~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 207 (459)
T PRK05965 128 RHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAK 207 (459)
T ss_pred HHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHH
Confidence 9987666654566666 5678999864432221 11 1233433210 0123 3678888
Q ss_pred HHhcC-CCeEEEEEEcC-CCccccc---ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc--------CCcEEEeC
Q 001531 724 AEANR-DNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLN 790 (1058)
Q Consensus 724 i~~~~-~~taaV~vt~P-n~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~--------GaDi~~~s 790 (1058)
+++++ +++++|+++.- ...|++. ..+++|.++|++||+++|+|++ +.|+.+.|++ -+||+++
T Consensus 208 i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV----~tGfGRtG~~~a~~~~gv~PDiv~~- 282 (459)
T PRK05965 208 VAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEV----ITGFGRTGPLFACEAEGVVPDLMTV- 282 (459)
T ss_pred HHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEech----hccCccCchhhhHhhcCCCCCeEEe-
Confidence 87554 67888888753 3456654 2589999999999999999998 5677777654 2699887
Q ss_pred CccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHH
Q 001531 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1058)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1058)
.|.++ +|--.+|.+++++++++.+.... .. .......+++.|+++.++++.+.|..+-++++.+
T Consensus 283 -gKgl~----gG~~Pi~av~~~~~i~~~~~~~~----------~~-~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l~~ 346 (459)
T PRK05965 283 -AKGLT----SGYVPMGAVLMSDHVYQGIADGA----------GA-AAPVGHGYTYSAHPVSAAVGLEVLRLYHEGGLLA 346 (459)
T ss_pred -chhhc----cCCcceeEEEEcHHHHHHHhccc----------cc-cccccccCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 47663 33224777788877765432110 00 0000111224567788888889999887776554
Q ss_pred HHHHHHHHHHHHHHHHhcc--CCee--eccCCCccc-eEEEEecccccccCCC---CHHHHHHHHHHCCccccCCCCCCC
Q 001531 871 ASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVA-HEFIVDLRGLKNTAGI---EPEDVAKRLMDYGFHGPTMSWPVP 942 (1058)
Q Consensus 871 ~a~~~~~~a~yL~~~L~~~--~~v~--~~g~~~~~~-~e~vv~~~~~~~~~g~---~~~~v~k~L~~~Gi~~~~~~~p~~ 942 (1058)
. .....++|.++|+++ ++++ +.|. |... .+++-+... +..... -...+.+.+.++|+.+.... .
T Consensus 347 ~---~~~~g~~l~~~l~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~-~~~~~~~~~~~~~i~~~~~~~Gll~~~~g---~ 418 (459)
T PRK05965 347 N---GQKAGPRFAAGLDALRAHPLVGDVRGR-GLLGALELVADKAT-KTPFDAALDPADRIFDRAYANGLVFRAFG---D 418 (459)
T ss_pred H---HHHHHHHHHHHHHhhccCCCEEEEeec-ceEEEEEEeccccc-cCCCCchhHHHHHHHHHHHhCCeEEEecC---C
Confidence 3 345677888888764 2221 2231 2211 122111100 000000 13567788889999875322 3
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001531 943 GTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1058)
Q Consensus 943 ~~Lris~te~~t~eeid~fi~aL~~i~~e~~~ 974 (1058)
+.+++.|....|++|||+++++|.+++.++.+
T Consensus 419 ~~i~~~PpL~it~~ei~~~~~~l~~~l~~~~~ 450 (459)
T PRK05965 419 GVLGFAPALCCTEGEFDLIFERTRKTLDDVLA 450 (459)
T ss_pred cEEEEECCCcCCHHHHHHHHHHHHHHHHHHhc
Confidence 67999999999999999999999999988743
No 209
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.68 E-value=1e-14 Score=170.43 Aligned_cols=214 Identities=23% Similarity=0.256 Sum_probs=158.0
Q ss_pred HHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchh---
Q 001531 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD--- 290 (1058)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~~--- 290 (1058)
.++++.+|+++|.+. +.++.+|++++.+++.++ . ++||+|+++...|+.+...++..+...|++++++|.++
T Consensus 62 ~~le~~lA~l~g~~~--av~~~sG~~Ai~~~l~al-~--~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~d~e~ 136 (391)
T TIGR01328 62 SNLEGRIAFLEGTEA--AVATSSGMGAIAATLLTI-L--KAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMAIPEE 136 (391)
T ss_pred HHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-h--CCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCCCHHH
Confidence 457789999999986 678899998888777666 2 37999999999999888888776778899999998754
Q ss_pred hhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCCC
Q 001531 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1058)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~GG 367 (1058)
+++ ++++|++|++.+| |++|.+.|+++|+++||++|++++|| +.++.+....|.++|+|+++.|. |.|++| |+
T Consensus 137 l~~~i~~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD-~a~a~~~~~~~~~~g~Divv~S~sK~lgg~---g~ 212 (391)
T TIGR01328 137 VKAHIKDNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVD-NTFATPMLTNPVALGVDVVVHSATKYIGGH---GD 212 (391)
T ss_pred HHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEE-CCCchhccCCchhcCCCEEEccccccccCC---CC
Confidence 444 6788999999998 68999999999999999999999994 56666666667788999999998 877643 33
Q ss_pred CceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHH
Q 001531 368 PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIA 447 (1058)
Q Consensus 368 P~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia 447 (1058)
+.+|+++.++++++++- ..+ ++.... +. .++. .|+ +...+-+-+....
T Consensus 213 ~~gG~v~~~~~li~~l~--~~~----------------------~~~~~g-~~--l~~~---~a~--l~l~~L~tl~~r~ 260 (391)
T TIGR01328 213 VVAGLICGKAELLQQIR--MVG----------------------IKDMTG-SV--ISPF---DAW--LILRGLKTLNIRM 260 (391)
T ss_pred ceEEEEEcCHHHHHHHH--HHH----------------------HHhCCC-CC--CCcH---HHH--HHHhCcCcHHHHH
Confidence 44688888887765541 000 000000 00 0111 222 1333444566667
Q ss_pred HHHHHHHHHHHHHHhcCCCeE
Q 001531 448 QRVHGLAGTFALGLKKLGTVE 468 (1058)
Q Consensus 448 ~~~~~~a~~l~~~L~~~G~~~ 468 (1058)
++..+++.++++.|++.++++
T Consensus 261 ~~~~~na~~la~~L~~~p~v~ 281 (391)
T TIGR01328 261 KRHSENAMKVAEYLKSHPAVE 281 (391)
T ss_pred HHHHHHHHHHHHHHHhCCCcc
Confidence 778899999999999886554
No 210
>PLN02822 serine palmitoyltransferase
Probab=99.68 E-value=1.1e-14 Score=174.23 Aligned_cols=299 Identities=14% Similarity=0.141 Sum_probs=190.0
Q ss_pred hcHHHHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEE
Q 001531 628 QGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSV 707 (1058)
Q Consensus 628 qG~~~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V 707 (1058)
-|..+...++++.+++++|.+...++. +|.++..+ +++++. ++++.|++...+|++....+.+.|.+++.+
T Consensus 150 yg~~~~~~~Lee~La~~~~~~~~i~~s-~G~~a~~s---ai~a~~-----~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~ 220 (481)
T PLN02822 150 YGTIDVHLDCETKIAKFLGTPDSILYS-YGLSTIFS---VIPAFC-----KKGDIIVADEGVHWGIQNGLYLSRSTIVYF 220 (481)
T ss_pred ccCHHHHHHHHHHHHHHhCCCCEEEEC-CHHHHHHH---HHHHhC-----CCCCEEEEeCCccHHHHHHHHHcCCeEEEE
Confidence 356677889999999999987654444 45444433 445442 356888888888877666677889999999
Q ss_pred cCCCCCCCCHHHHHHHHHhcC------CCe-EEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCC
Q 001531 708 GTDAKGNINIEELRKAAEANR------DNL-STLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP 779 (1058)
Q Consensus 708 ~~d~~g~iD~e~L~~~i~~~~------~~t-aaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~p 779 (1058)
+.+ |.++++..+++.. +++ ++|+++.+ +.+|.+. ++++|+++|++||+++++|+++.. +.+.+.
T Consensus 221 ~~n-----d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~-~L~~i~~l~~k~~~~LIvDEa~s~--gvlG~~ 292 (481)
T PLN02822 221 KHN-----DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIA-PLDEIVRLKEKYRFRVLLDESNSF--GVLGKS 292 (481)
T ss_pred CCC-----CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCcc-CHHHHHHHHHHcCCEEEEECCccc--cccCCC
Confidence 873 6677777665421 234 67777766 4689888 699999999999999999999853 333322
Q ss_pred C-----cc-----CCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhh
Q 001531 780 G-----YI-----GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (1058)
Q Consensus 780 g-----~~-----GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~ 849 (1058)
| .+ ..||++++++|+|+++ | |++++++++++.+... + .....+++. .
T Consensus 293 G~G~~e~~~v~~~~~dii~~s~sKalg~~------G-G~i~g~~~ii~~~~~~--~------------~~~~fsa~l--P 349 (481)
T PLN02822 293 GRGLSEHFGVPIEKIDIITAAMGHALATE------G-GFCTGSARVVDHQRLS--S------------SGYVFSASL--P 349 (481)
T ss_pred CCChHHHcCCCCCCCeEEEecchhhhhhC------C-eEEEcCHHHHHHHHhc--C------------Cceeecccc--C
Confidence 2 12 4689999999998522 2 7888887766543210 0 000111110 1
Q ss_pred HHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCccceEEEEecccccccCCCC---HHHHH
Q 001531 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIE---PEDVA 924 (1058)
Q Consensus 850 ~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~--~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~---~~~v~ 924 (1058)
+..+.++.+.+..+.. ..+..++..++++++.++|++. +.+..++ .++. +.+.++........+ ..+++
T Consensus 350 p~~~~Aa~~aL~~l~~--~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~-~spi---~~l~l~~~~~~~~~~~~~~~~~~ 423 (481)
T PLN02822 350 PYLASAAITAIDVLED--NPSVLAKLKENIALLHKGLSDIPGLSIGSNT-LSPI---VFLHLEKSTGSAKEDLSLLEHIA 423 (481)
T ss_pred HHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHhcCCcccCCCC-CCCE---EEEEeCCCcccccchHHHHHHHH
Confidence 1222333344444322 1345566778899999999875 3332111 1233 223332100000001 35789
Q ss_pred HHHH-HCCccccCCCCC------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 925 KRLM-DYGFHGPTMSWP------VPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 925 k~L~-~~Gi~~~~~~~p------~~~~Lris~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
++|. ++||.+....+| .+..+||+++..+|++||++++++|++++.++
T Consensus 424 ~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~~ 478 (481)
T PLN02822 424 DRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAASV 478 (481)
T ss_pred HHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHHH
Confidence 9997 889986532222 24579999999999999999999999987765
No 211
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.68 E-value=1.1e-14 Score=171.35 Aligned_cols=306 Identities=13% Similarity=0.092 Sum_probs=193.1
Q ss_pred hcHHHHHHHHHHHHHHHhCCC---ce-eeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcE
Q 001531 628 QGYQEMFNNLGEWLCTITGFD---SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1058)
Q Consensus 628 qG~~~~~~el~~~lael~G~~---~~-~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~ 703 (1058)
+|..++...+.+++.+..|.+ .. ++..++|++.. +.++++.+. .+++.|+++.+.+..+...++..|.+
T Consensus 81 ~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~a--l~~~~~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~ 153 (410)
T PRK06290 81 NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPA--LAMLPSCFI-----NPGDVTLMTVPGYPVTGTHTKYYGGE 153 (410)
T ss_pred CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHH--HHHHHHHhC-----CCCCEEEEeCCCCccHHHHHHHcCCE
Confidence 576666666667766666754 33 57777777632 333333331 35688999988777777778899999
Q ss_pred EEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--ccHHHHHHHHHHcCCEEEEeccCccc-ccCcC
Q 001531 704 IVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVGLT 777 (1058)
Q Consensus 704 vv~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~a-l~gl~ 777 (1058)
++.++.+++ ..+|++++++++. +++++|++++| |.+|.+- +.+++|.++|+++|+++++|+++... ..+-.
T Consensus 154 v~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~ 230 (410)
T PRK06290 154 VYNLPLLEENNFLPDLDSIPKDIK---EKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKP 230 (410)
T ss_pred EEEEecCCCcCCcCCHHHHHHhhc---ccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCC
Confidence 999999864 4679999999886 68899999999 4789885 24789999999999999999986421 11100
Q ss_pred CC-----CccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHH
Q 001531 778 SP-----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1058)
Q Consensus 778 ~p-----g~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~ 852 (1058)
.+ +..+.+|+..++.|.|+.| |.++|++++++++...+... +....++++...+
T Consensus 231 ~s~~~~~~~~~~~I~i~SfSK~~g~~----GlRiG~ii~~~~l~~~l~~~--------------~~~~~~~~~~~~q--- 289 (410)
T PRK06290 231 LSFLSVPGAKEVGVEIHSLSKAYNMT----GWRLAFVVGNELIVKAFATV--------------KDNNDSGQFIAIQ--- 289 (410)
T ss_pred cChhcCCCccccEEEEeechhhcCCc----hhheEeEEeCHHHHHHHHHH--------------HhccccCCcHHHH---
Confidence 01 1123458888888988544 67899999887665443100 0011111111111
Q ss_pred HHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccc-c-CCCCHHHHHHHHHHC
Q 001531 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKN-T-AGIEPEDVAKRLMDY 930 (1058)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~-~-~g~~~~~v~k~L~~~ 930 (1058)
.++..++.. .+-+++..++..++++++.+.|++. .+.+..+++.++ +++++++... . ...+..+++++|.++
T Consensus 290 -~aa~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~g~f~--l~v~lp~~~~~~~~~~~~~~~~~~Ll~~ 363 (410)
T PRK06290 290 -KAGIYALDH--PEITEKIREKYSRRLDKLVKILNEV-GFKAEMPGGTFY--LYVKAPKGTKSGIKFENAEEFSQYLIKE 363 (410)
T ss_pred -HHHHHHhhC--cHHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCeeeE--EEEECCCccccCCCCCCHHHHHHHHHHh
Confidence 111222221 1224445555667788899999875 332222233331 3456642100 0 012578899999988
Q ss_pred Cccc--cCCCCCCCCEEEEEcCC-CCCHHHHHHHHHHHHHHHHHH
Q 001531 931 GFHG--PTMSWPVPGTLMIEPTE-SESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 931 Gi~~--~~~~~p~~~~Lris~te-~~t~eeid~fi~aL~~i~~e~ 972 (1058)
|+.+ +...| .+.+||+++. ..++++.++|+++|++++..+
T Consensus 364 ~~v~~~p~~~~--~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 364 KLISTVPWDDA--GHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred CCEEEECCccc--cCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 7543 32223 4789999973 457889999999999887653
No 212
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.68 E-value=1.1e-14 Score=171.32 Aligned_cols=305 Identities=15% Similarity=0.160 Sum_probs=193.5
Q ss_pred hcHHHHHHHHHHHHHHHhCCC--c-eeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEE
Q 001531 628 QGYQEMFNNLGEWLCTITGFD--S-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1058)
Q Consensus 628 qG~~~~~~el~~~lael~G~~--~-~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~v 704 (1058)
+|..++...+.+++++..|.+ . ..+..++|++. +..++++.+. .++++|+++.+.+..+...+...|.++
T Consensus 78 ~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~--al~~~~~~l~-----~~Gd~Vlv~~P~y~~~~~~~~~~g~~v 150 (405)
T PRK06207 78 RGDADIRELLAARLAAFTGAPVDAADELIITPGTQG--ALFLAVAATV-----ARGDKVAIVQPDYFANRKLVEFFEGEM 150 (405)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHH--HHHHHHHHhc-----CCCCEEEEeCCCchhHHHHHHHcCCEE
Confidence 576777778888888888863 3 44555556542 2333344331 356889999887777777788999999
Q ss_pred EEEcCCC-----CCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--ccHHHHHHHHHHcCCEEEEeccCccc-ccC
Q 001531 705 VSVGTDA-----KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG 775 (1058)
Q Consensus 705 v~V~~d~-----~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~a-l~g 775 (1058)
+.++++. +..+|+++|+++++ +++++|++++| |.+|.+- +++++|+++|+++|+++++|+++..- ..+
T Consensus 151 ~~v~~~~~~~~~~~~~d~~~l~~~~~---~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~ 227 (405)
T PRK06207 151 VPVQLDYLSADKRAGLDLDQLEEAFK---AGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDG 227 (405)
T ss_pred EEEeccccCcccCCCcCHHHHHHhhh---hcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC
Confidence 9998862 46799999999996 67889999999 4789875 25899999999999999999986421 111
Q ss_pred --cCCCCccCC--c--EEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhh
Q 001531 776 --LTSPGYIGA--D--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (1058)
Q Consensus 776 --l~~pg~~Ga--D--i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~ 849 (1058)
......+.. | |++.++.|+|++| |.++|++++++++...+-.. .....++.+.+.+
T Consensus 228 ~~~~~~~~~~~~~~~vi~i~SfSK~~~lp----GlRiG~ii~~~~l~~~~~~~--------------~~~~~~~~~~~~q 289 (405)
T PRK06207 228 TSYTHLRALPIDPENVITIMGPSKTESLS----GYRLGVAFGSPAIIDRMEKL--------------QAIVSLRAAGYSQ 289 (405)
T ss_pred CCCCchhcCCCCcCcEEEEecchhhccCc----ccceEEEEcCHHHHHHHHHH--------------HhHhccCCCHHHH
Confidence 111111222 2 6677889998765 67899999887665443110 0011122211122
Q ss_pred HHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHH-
Q 001531 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM- 928 (1058)
Q Consensus 850 ~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~- 928 (1058)
. ++..++. -+..-+.+..+....+++++.+.|++...+.+..+++..+ ++++++. .+.+..+++++|.
T Consensus 290 ~----a~~~~l~-~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f--l~~~l~~----~~~~~~~~~~~l~~ 358 (405)
T PRK06207 290 A----VLRTWFS-EPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSY--LFPRLPR----LAVSLHDFVKILRL 358 (405)
T ss_pred H----HHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEE--EEEeCcc----cCCCHHHHHHHHHH
Confidence 1 1222222 1212244555555667788888887642232222223222 4566652 1346788999997
Q ss_pred HCCcccc-CCCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001531 929 DYGFHGP-TMSWP--VPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1058)
Q Consensus 929 ~~Gi~~~-~~~~p--~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~ 973 (1058)
++|+.+. ...|. .++.+||++.. +.++++..++.|.+++++.+
T Consensus 359 ~~gV~v~pG~~F~~~~~~~~Ris~~~--~~~~l~~al~rl~~~l~~~~ 404 (405)
T PRK06207 359 QAGVIVTPGTEFSPHTADSIRLNFSQ--DHAAAVAAAERIAQLIERYR 404 (405)
T ss_pred hcCEEEeCchHhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHHhh
Confidence 6899853 32332 35789999985 57788888888877765543
No 213
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.67 E-value=1.9e-15 Score=183.73 Aligned_cols=281 Identities=11% Similarity=0.084 Sum_probs=197.0
Q ss_pred HHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHH-HHHhhcCCCeEEEEeCc-
Q 001531 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDI-CITRADGFDIKVVVSDL- 288 (1058)
Q Consensus 211 ~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~-~~~~a~~~gi~v~~v~~- 288 (1058)
..+.+.|+.+|+++|++.+.+ +++|+|+++.++++|.. ++||+||+++++|.|+... +. ..|++.+++.+
T Consensus 174 G~i~eAq~~AA~~fgAd~tyF-lvNGTS~gn~a~i~a~~---~~Gd~VLvdRN~HKSv~hgaLi----LsGa~PVYl~P~ 245 (720)
T PRK13578 174 GAAKDAQKHAAKVFNADKTYF-VLNGTSASNKVVTNALL---TPGDLVLFDRNNHKSNHHGALI----QAGATPVYLETA 245 (720)
T ss_pred hHHHHHHHHHHHHhCCCceEE-EeCChhHHHHHHHHHhc---CCCCEEEeecccHHHHHHHHHH----HcCCeEEEeecc
Confidence 468899999999999998655 77899999999999874 3899999999999999985 43 24777777543
Q ss_pred ------------hh-----hhc-cC---CC-------EeEEEEEcCCCceeeccHHHHHHH-HHhcCcEEEEEeccc-cc
Q 001531 289 ------------KD-----IDY-KS---GD-------VCGVLVQYPGTEGEVLDYGDFIKN-AHANGVKVVMATDLL-AL 338 (1058)
Q Consensus 289 ------------~~-----l~~-l~---~~-------t~~V~v~~pn~~G~i~dl~~I~~~-a~~~galliV~a~~~-sl 338 (1058)
++ +++ |. ++ .++|++|+|||+|.+.|+++|+++ +|.++ .++|+ ++| ++
T Consensus 246 ~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~~~-~llvD-EAhgah 323 (720)
T PRK13578 246 RNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCD-YILFD-SAWVGY 323 (720)
T ss_pred ccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhccCC-cEEEe-Ccchhh
Confidence 22 443 31 22 689999999999999999999999 68888 88883 222 11
Q ss_pred ----cC---C-CCCCcccce----EEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecc
Q 001531 339 ----TI---L-KPPGELGAD----IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQ 405 (1058)
Q Consensus 339 ----g~---l-~~p~~~GaD----ivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lq 405 (1058)
.. + ....+.|+| +++.|. |.++. ++ +++++.+++..++ | .+.|
T Consensus 324 ~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~a-lT----QaS~LHvk~~~i~-------g-------~~~~----- 379 (720)
T PRK13578 324 EQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAG-FS----QTSQIHKKDNHIK-------G-------QARY----- 379 (720)
T ss_pred hccCcccccCChhhhhcCCCCCCeEEEEChhhcchh-hh----hHhhhhcCCcccc-------c-------cccc-----
Confidence 11 1 112578999 999999 66653 22 4567777654321 1 0000
Q ss_pred cccccccccccCCCccchhHHHHHHHHHHH--HHhC-cccHHHHHHHHHHHHHHHHHHH-hcCCCeEEcCC---------
Q 001531 406 TREQHIRRDKATSNICTAQALLANMAAMYA--VYHG-PEGLKTIAQRVHGLAGTFALGL-KKLGTVEVQGL--------- 472 (1058)
Q Consensus 406 treq~irRekaTsni~t~~~l~a~~Aa~yl--~~~g-~~Gl~~ia~~~~~~a~~l~~~L-~~~G~~~l~~~--------- 472 (1058)
-.|-|...+-.-.-|+++.|.++|++-. .++. +.| +++.++..+++..+++.| +.+.+++++.+
T Consensus 380 --v~~~r~~~al~m~qSTSPsY~LmASLDva~~~m~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~ 456 (720)
T PRK13578 380 --CPHKRLNNAFMLHASTSPFYPLFAALDVNAKMHEGESG-RRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQ 456 (720)
T ss_pred --CCHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccc
Confidence 0111112222233466889999999832 2332 345 557778888999999988 65544776621
Q ss_pred --------------------C------------CccE--EEEecCC--------------HHHHHHHHHHcCceeeeccC
Q 001531 473 --------------------P------------FFDT--VKVKCAD--------------AHAIASAAYKIEMNLRVVDS 504 (1058)
Q Consensus 473 --------------------~------------~~~~--v~i~~~~--------------~~~l~~~L~~~GI~~~~~~~ 504 (1058)
. .+|+ ++|.+++ +..+.+.|+++||.+...+.
T Consensus 457 ~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d~ 536 (720)
T PRK13578 457 DYPTEQIASDLRFFSFEPGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVPEKCDL 536 (720)
T ss_pred cCchhhhcccccccccccCccccccccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEEEecCC
Confidence 0 1233 4444443 37899999888999999888
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHh
Q 001531 505 NTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 505 ~~lris~~~~~t~edid~ll~al~ 528 (1058)
..+++-++..+|++++++|+++|.
T Consensus 537 ~~vL~l~s~g~t~~~~~~Lv~aL~ 560 (720)
T PRK13578 537 NSILFLLTPAEDMAKLQQLVAMLA 560 (720)
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHH
Confidence 999999999999999999999986
No 214
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.67 E-value=1.7e-14 Score=169.54 Aligned_cols=291 Identities=18% Similarity=0.264 Sum_probs=190.0
Q ss_pred HHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHc-CC-CCCCEEEEc-CCCCCccHHHHHhCC--------
Q 001531 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKAR-GD-HHRNVCIIP-VSAHGTNPATAAMCG-------- 701 (1058)
Q Consensus 633 ~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~-G~-~~r~~Vlip-~saHg~~pa~a~~~G-------- 701 (1058)
...++++.+++++|.+.+ +..++|++++++++.++|.|+..+ |. +++++|+.. .+.||..-....+.|
T Consensus 80 ~~~~l~~~l~~~~~~~~~-~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~ 158 (401)
T TIGR01885 80 VFGEFAEYVTKLFGYDKV-LPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNF 158 (401)
T ss_pred HHHHHHHHHHhhcCCCEE-EEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCccccccc
Confidence 356788999999987644 667899999988888888775322 21 234566654 456876544433322
Q ss_pred ----cEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccc
Q 001531 702 ----MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQ 773 (1058)
Q Consensus 702 ----~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al 773 (1058)
..++.++. .|+++|+++++++++++++|++..+ +..|.+.+ .+++|.++|++||+++++|+++. ++
T Consensus 159 ~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g~ 232 (401)
T TIGR01885 159 GPYVPGFKKIPY-----NNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQT-GL 232 (401)
T ss_pred CCCCCCceEeCC-----CCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CC
Confidence 12344444 3799999999766678888888765 46688763 39999999999999999999963 33
Q ss_pred cCcCCCC--------ccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCcc
Q 001531 774 VGLTSPG--------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAA 845 (1058)
Q Consensus 774 ~gl~~pg--------~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa 845 (1058)
+ +.| .+..|++++ .|.|+ +||..+|++++++++.+.+..... . ...+
T Consensus 233 g---~~G~~~~~~~~~~~~di~~~--gK~l~----~g~~~ig~v~~~~~i~~~~~~~~~-------------~-~t~~-- 287 (401)
T TIGR01885 233 G---RTGKLLCVDHENVKPDIVLL--GKALS----GGVYPVSAVLADDDVMLTIKPGEH-------------G-STYG-- 287 (401)
T ss_pred C---ccchhhHHhhcCCCCCEEEe--ecccc----CCCCCcEEEEEcHHHHhhccCCCC-------------C-CCCC--
Confidence 2 222 235788775 38764 455678899888776655421100 0 1111
Q ss_pred chhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCee--eccCCCccceEEEEecccccccCCCCHHH
Q 001531 846 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPED 922 (1058)
Q Consensus 846 ~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~--~~g~~~~~~~e~vv~~~~~~~~~g~~~~~ 922 (1058)
+++..++++.+.+..+..+++.+ +...+++++.++|+++ ..+. +.| .+. +..+.++.+. .+.+..+
T Consensus 288 --~~p~~~~aa~a~L~~i~~~~l~~---~~~~~~~~~~~~L~~l~~~~~~~~~g-~g~-~~~i~~~~~~----~~~~~~~ 356 (401)
T TIGR01885 288 --GNPLACAVAVAALEVLEEEKLAE---NAEKLGEIFRDQLKKLPKPIITEVRG-RGL-LNAIVIDESK----TGRTAWD 356 (401)
T ss_pred --CCHHHHHHHHHHHHHHHhccHHH---HHHHHHHHHHHHHHhccCCceeEEee-cCe-eEEEEeccCc----chhHHHH
Confidence 23344455566667665555543 4445688999999875 3332 122 232 2222233210 1135678
Q ss_pred HHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001531 923 VAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIR 969 (1058)
Q Consensus 923 v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~ 969 (1058)
+.++|.++|+.+.... ++.+||+|+..+|++|||+++++|.+++
T Consensus 357 l~~~l~~~Gv~v~~~~---~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 357 LCLKLKEKGLLAKPTH---GNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred HHHHHHhCCEEEEecC---CCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 9999999999874322 4789999999999999999999998764
No 215
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.67 E-value=6.3e-16 Score=173.95 Aligned_cols=166 Identities=19% Similarity=0.192 Sum_probs=128.1
Q ss_pred HHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCC
Q 001531 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1058)
Q Consensus 633 ~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~ 712 (1058)
.+.++++.+++++|.+.+.+.++++++|..++++++. +++++|++++..|.++...+.+.|.+++.++.+.+
T Consensus 60 ~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~--------~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~ 131 (294)
T cd00615 60 PIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVC--------GPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERN 131 (294)
T ss_pred HHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcC--------CCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccC
Confidence 3778999999999998766667777666655544432 35689999999888777778889999999987543
Q ss_pred ------CCCCHHHHHHHHHhcCCCeEEEEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCcccc--cCcC--CCCcc
Q 001531 713 ------GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ--VGLT--SPGYI 782 (1058)
Q Consensus 713 ------g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al--~gl~--~pg~~ 782 (1058)
+.+|+++++++++++ +++++|++++||++|.+. |+++|+++||++|++++||+++...+ .+.. ....+
T Consensus 132 ~~~~~~~~i~~~~l~~~l~~~-~~~k~v~l~~p~~~G~~~-dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~ 209 (294)
T cd00615 132 PYYGIAGGIPPETFKKALIEH-PDAKAAVITNPTYYGICY-NLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMA 209 (294)
T ss_pred cccCcCCCCCHHHHHHHHHhC-CCceEEEEECCCCCCEec-CHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhc
Confidence 479999999999742 578999999999999998 79999999999999999999974221 1111 11246
Q ss_pred CCcEEEeCCccccccCCCCCCC-ceeEEEEeCC
Q 001531 783 GADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKH 814 (1058)
Q Consensus 783 GaDi~~~s~hKtf~~P~g~GGP-g~G~i~~~~~ 814 (1058)
|+|+++.|+||+++ || +.|++.+++.
T Consensus 210 ~~div~~S~hK~l~------g~~~~~~l~~~~~ 236 (294)
T cd00615 210 GADIVVQSTHKTLP------ALTQGSMIHVKGD 236 (294)
T ss_pred CCcEEEEchhcccc------hHhHHHHHHhCCC
Confidence 89999999999873 44 4566666654
No 216
>PLN02263 serine decarboxylase
Probab=99.67 E-value=5.1e-14 Score=164.68 Aligned_cols=334 Identities=15% Similarity=0.101 Sum_probs=210.8
Q ss_pred HHHHHHHHHHhcCCcccccccCCCCCCCCC-hHHHH---HHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCC
Q 001531 151 SQMIEHMQKLASMNKVYKSFIGMGYYNTHV-PPVIL---RNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL 226 (1058)
Q Consensus 151 ~e~~~~~~~la~~n~~~~~~lG~g~~~~~~-p~~i~---~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~ 226 (1058)
.++++.+.+.-..+... |+|- .++.-. ++.+. +..+.|-++-..+.||+- ++.+.-.+.-.++++|+|+
T Consensus 76 ~~~l~~~~~~~~~~~~~--~~gY-p~n~~~d~s~l~~~l~~~~nN~Gdp~~~s~~~~----~s~~~E~~Vi~wla~L~g~ 148 (470)
T PLN02263 76 ASVLARYRKTLVERTKH--HLGY-PYNLDFDYGALGQLQHFSINNLGDPFIESNYGV----HSRQFEVGVLDWFARLWEI 148 (470)
T ss_pred HHHHHHHHHHHHhcccc--eeCC-CCcccCChhhHHHHHHhhccCCCCccccCCcch----hHHHHHHHHHHHHHHHhCC
Confidence 45556666555544332 4453 122222 23332 234445554444455531 2334445566799999999
Q ss_pred CCc--ceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cC
Q 001531 227 PMS--NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS 295 (1058)
Q Consensus 227 ~~a--nasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~--------~~l~~-l~ 295 (1058)
+.. ...+++|||.++...+++.|-. .++..+++|+..|.|+.+.++. +|++++.++. ++|++ |.
T Consensus 149 p~~~~~G~vtsGGTEaNL~Al~aARe~-~~~~vvy~S~~aH~Sv~KAa~l----lgi~~~~Vp~d~~g~mD~~aL~~aI~ 223 (470)
T PLN02263 149 EKNEYWGYITNCGTEGNLHGILVGREV-FPDGILYASRESHYSVFKAARM----YRMECVKVDTLVSGEIDCADFKAKLL 223 (470)
T ss_pred CCCCCeEEEeCcHHHHHHHHHHHHHhh-cCCcEEEEcCCccHHHHHHHHh----cCCcceEeccCCCCcCcHHHHHHHHH
Confidence 753 4678888886555443333321 1345789999999999998754 5777777664 35655 53
Q ss_pred CC---EeEEEEEcC-CCceeeccHHHHHHHHHhcCc-----EEEEEeccccccC--CCC-C---CcccceEEEecC-ccc
Q 001531 296 GD---VCGVLVQYP-GTEGEVLDYGDFIKNAHANGV-----KVVMATDLLALTI--LKP-P---GELGADIVVGSA-QRF 359 (1058)
Q Consensus 296 ~~---t~~V~v~~p-n~~G~i~dl~~I~~~a~~~ga-----lliV~a~~~slg~--l~~-p---~~~GaDivvgs~-k~l 359 (1058)
.+ ...|+.+.+ +.+|.++||++|+++|+++|+ +++||+-.-+.-+ +.. + +..+||-+..++ |++
T Consensus 224 ~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~~~vDSIsvD~HK~l 303 (470)
T PLN02263 224 ANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFV 303 (470)
T ss_pred hCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccccCCCcCccEEEECCcccc
Confidence 33 456667776 579999999999999999997 9999652212111 111 1 223489999999 777
Q ss_pred ccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhC
Q 001531 360 GVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHG 439 (1058)
Q Consensus 360 g~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g 439 (1058)
+.|++ .|++.+|+++.+.+... ..| +. .+...+ .++-+. .. ++...+.+..+|
T Consensus 304 ~~P~~-----cgvll~R~~~~~~~~~~-----------~~Y-l~--~~d~ti---~gSR~g---~~--al~lW~~L~~~G 356 (470)
T PLN02263 304 GCPMP-----CGVQITRMEHINVLSSN-----------VEY-LA--SRDATI---MGSRNG---HA--PIFLWYTLNRKG 356 (470)
T ss_pred CCCcC-----EEEEEEehhhHhhhccC-----------hHh-hC--CCCCCc---CCCCCc---HH--HHHHHHHHHHhC
Confidence 77864 56788887665433110 001 00 000000 011111 11 122222358999
Q ss_pred cccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCCHHHHHHHHHHcCceeeeccCCeEEEEeccCCCHHH
Q 001531 440 PEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLED 519 (1058)
Q Consensus 440 ~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~~~~l~~~L~~~GI~~~~~~~~~lris~~~~~t~ed 519 (1058)
.+|++++.+++.++|+++.++|++.| ++++..|...+|+|..+... +..+|+.+... ++.++++++...+++.
T Consensus 357 ~~G~~~~i~~~~~~A~~l~~~l~~~g-~~~~~~p~s~~V~f~~p~~~-----~~~~gW~L~~~-~~~~Hivvmphv~~~~ 429 (470)
T PLN02263 357 YRGFQKEVQKCLRNAHYLKDRLREAG-ISAMLNELSSTVVFERPKDE-----EFVRRWQLACQ-GNIAHVVVMPSVTIEK 429 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEeCCCceEEEEecCchH-----HhhcceEEccC-CCcEEEEEcCCCCHHH
Confidence 99999999999999999999999997 87765566667888755321 23579988764 4579999999999999
Q ss_pred HHHHHHHHhCC
Q 001531 520 VDKLFIVFAGG 530 (1058)
Q Consensus 520 id~ll~al~~~ 530 (1058)
+|+|++.|...
T Consensus 430 id~fi~DL~~~ 440 (470)
T PLN02263 430 LDYFLKELVEK 440 (470)
T ss_pred HHHHHHHHHHH
Confidence 99999999754
No 217
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.67 E-value=1.1e-14 Score=171.86 Aligned_cols=333 Identities=16% Similarity=0.185 Sum_probs=209.1
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhC--CCceeeecCchHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIR 669 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G--~~~~~l~~~sGa~ge~a~llair 669 (1058)
..+|++.+.+..++..+. ..-.+....-+. .+...++.+.|++++. ++. .++.++|++++++++..+|
T Consensus 56 ~~lGh~~p~v~~ai~~q~-~~~~~~~~~~~~--------~~~~~~lae~L~~~~p~~~~~-v~f~~sGseAve~AlklAr 125 (429)
T PRK06173 56 ALHGYNHPRLNAAATNQL-AKMSHIMFGGFT--------HEPAVELAQKLLEILPPSLNK-IFFADSGSVAVEVAMKMAL 125 (429)
T ss_pred ccCCCCCHHHHHHHHHHH-HhcCCccccccC--------CHHHHHHHHHHHhhCCCCcCE-EEEeCCchHHHHHHHHHHH
Confidence 357888777766665552 221111100000 1224578888998874 343 4678899999999999999
Q ss_pred HHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCC--------c-----EEEEEcCCCC------CCCCHHHHHHHHHhcCC
Q 001531 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG--------M-----KIVSVGTDAK------GNINIEELRKAAEANRD 729 (1058)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G--------~-----~vv~V~~d~~------g~iD~e~L~~~i~~~~~ 729 (1058)
.|...+|..+|.+|+ ...++||....+....| + .+..+|.... ...+++.|++.++++++
T Consensus 126 ~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~ 205 (429)
T PRK06173 126 QYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGD 205 (429)
T ss_pred HHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCCC
Confidence 887666644566665 46788996433322111 0 1233443110 11257778888876667
Q ss_pred CeEEEEEEc--CCCccccc---ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc--------CCcEEEeCCccccc
Q 001531 730 NLSTLMVTY--PSTHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFC 796 (1058)
Q Consensus 730 ~taaV~vt~--Pn~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~--------GaDi~~~s~hKtf~ 796 (1058)
++++|+++. ....|++. ..+++|.++|++||+++++|+++ .|+.+.|.+ -+||+++ .|.+
T Consensus 206 ~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~----tG~GrtG~~~a~~~~gv~PDiv~~--gK~l- 278 (429)
T PRK06173 206 EIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIA----TGFGRTGKLFALEHAGVVPDIMCI--GKAL- 278 (429)
T ss_pred cEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchh----cCCCcCCcchHHHhcCCCCCEEEe--ehhh-
Confidence 899999986 24556653 25899999999999999999986 334444432 3688874 5776
Q ss_pred cCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHH
Q 001531 797 IPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI 876 (1058)
Q Consensus 797 ~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~ 876 (1058)
++|-.-++.+.+++++.+.+..... + .. ...+++.|+++.++++.+.|..+-++++. ++..
T Consensus 279 ---~gG~~p~~a~~~~~~i~~~~~~~~~----------~--~~-~~~~T~~g~p~~~aaa~a~l~~i~~~~~~---~~~~ 339 (429)
T PRK06173 279 ---TGGYLTLSATITTEAIAQTICSGEA----------K--CF-MHGPTFMANPLACAIAAESIRLLLESPWQ---QNIQ 339 (429)
T ss_pred ---hCCccccceEEecHHHHHHHhcCCC----------C--cc-ccCCCCCcCHHHHHHHHHHHHHHHhCCHH---HHHH
Confidence 3332446667777776655421100 0 00 01112335677788888888888666553 3455
Q ss_pred HHHHHHHHHHhcc--CCee--eccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCC
Q 001531 877 LNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTES 952 (1058)
Q Consensus 877 ~~a~yL~~~L~~~--~~v~--~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~ 952 (1058)
++.++|+++|++. ++.+ ..| .|. + .-+.+.. ..+...+.++|.++|+.+... .+.|||.|+..
T Consensus 340 ~~g~~l~~~L~~~~~~~~v~~vRg-~Gl-~--~~iel~~-----~~~~~~i~~~l~e~Gi~v~~~----g~~l~~~Ppl~ 406 (429)
T PRK06173 340 RIEAQLKQELAPAAEFDSVAEVRV-LGA-I--GVVEMKE-----PVNMATLQPRFVEHGIWVRPF----GKLVYIMPPFI 406 (429)
T ss_pred HHHHHHHHHHHHhhcCCCeeeeec-cce-E--EEEEeCC-----cccHHHHHHHHHHCCeEEEec----CCEEEEeCCcc
Confidence 6778888888753 3322 112 122 2 2233321 124678999999999987533 36899999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHH
Q 001531 953 ESKEELDRYCDALISIREEIA 973 (1058)
Q Consensus 953 ~t~eeid~fi~aL~~i~~e~~ 973 (1058)
.|++|||+++++|.+++.++.
T Consensus 407 it~~ei~~~~~~l~~~l~~~~ 427 (429)
T PRK06173 407 ISPDELSQLTSGLLRVLKQEY 427 (429)
T ss_pred CCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999987754
No 218
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.67 E-value=1.1e-14 Score=167.82 Aligned_cols=298 Identities=16% Similarity=0.194 Sum_probs=185.4
Q ss_pred hcHHHHHHHHHHHHHHHhCCC--ce-eeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEE
Q 001531 628 QGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1058)
Q Consensus 628 qG~~~~~~el~~~lael~G~~--~~-~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~v 704 (1058)
+|..++...+.+++.+..|.+ .. .+..++|++. ++.++++.+. ..|+ ++++|+++...+..+...+.+.|+++
T Consensus 36 ~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~--ai~~~~~~~~-~~g~-~~d~Vl~~~p~y~~~~~~~~~~g~~~ 111 (350)
T TIGR03537 36 LGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKE--AIFHFPLVFI-DPEE-DRRRVIFGTPGYPVYERGALFAGGEP 111 (350)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHH--HHHHHHHHHc-CCCC-CCceEEEcCCCCcchHHHHHhcCCEE
Confidence 576666666777776666754 43 5666777653 3334444332 2221 34689999887777777789999999
Q ss_pred EEEcCCC-CC-CCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc--cHHHHHHHHHHcCCEEEEeccCcccccCcCCC
Q 001531 705 VSVGTDA-KG-NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQVGLTSP 779 (1058)
Q Consensus 705 v~V~~d~-~g-~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~--dI~eI~~lah~~g~lv~vD~a~~~al~gl~~p 779 (1058)
+.++.++ +| .+|+++++++++ ++++++++++| |.+|.+.+ .+++|+++|+++|+.+++|+++.....+-..+
T Consensus 112 ~~v~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~ 188 (350)
T TIGR03537 112 TAVKLKKEDGFLLRLEKVEKSIL---EETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPH 188 (350)
T ss_pred EEcccCcccCCccCHHHHHHhhh---hccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCC
Confidence 9999974 33 589999999997 67889999999 57898751 39999999999999999999864211110011
Q ss_pred --CccCCc--EEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHH
Q 001531 780 --GYIGAD--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 855 (1058)
Q Consensus 780 --g~~GaD--i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~ 855 (1058)
..++.| |++.+++|+|+.| |.++|++++++++...+-.. +....++++...+..
T Consensus 189 ~~~~~~~~~~i~~~s~SK~~g~~----GlRiG~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~q~~---- 246 (350)
T TIGR03537 189 SALEVGIENVLAFHSLSKRSGMT----GYRSGFVAGDEKLISFLRKL--------------RANFGVASPDFVQAA---- 246 (350)
T ss_pred chhhcCcCCEEEEeecccccCCc----cccceeeecCHHHHHHHHHH--------------HHhhccCCCHHHHHH----
Confidence 112333 6666888987543 67799998776655433110 001122221111111
Q ss_pred HHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccc
Q 001531 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 934 (1058)
Q Consensus 856 a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~ 934 (1058)
+.+.+ ...+.+++..++...+.+.+.+.|++. +++. .+++.++ ++++++. +.+..++.+.|.++|+.+
T Consensus 247 ~~~~l--~~~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~--~~~g~~~--~~~~~~~-----~~~~~~l~~~L~~~gv~v 315 (350)
T TIGR03537 247 AKAAW--SDDNHVLERRKIFKRKRDLFIEFFNKVGLEYL--YPDATFY--LWVKVPS-----GIDAKDYALRLLENGIVV 315 (350)
T ss_pred HHHHh--CCcHHHHHHHHHHHHHHHHHHHHHHHCCCccc--CCCeEEE--EEEECCC-----CCCHHHHHHHHHHCCEEE
Confidence 11111 123334455555566777788888764 3322 2223221 3466652 356789999999999987
Q ss_pred cC-CCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 001531 935 PT-MSWP--VPGTLMIEPTESESKEELDRYCDALIS 967 (1058)
Q Consensus 935 ~~-~~~p--~~~~Lris~te~~t~eeid~fi~aL~~ 967 (1058)
.. ..|. ..+++||++. .+.+++++.++.|++
T Consensus 316 ~~g~~f~~~~~~~~Ri~~~--~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 316 APGENFGSGEEGYVRVALV--PTLEECEEALRLWER 349 (350)
T ss_pred cCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHhc
Confidence 43 3343 2578999975 457777777766653
No 219
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.67 E-value=2.1e-14 Score=170.14 Aligned_cols=338 Identities=17% Similarity=0.209 Sum_probs=203.5
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhC--CCceeeecCchHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIR 669 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G--~~~~~l~~~sGa~ge~a~llair 669 (1058)
..+|++.+.+..++..+. ..-.+.. .++- ..+...++.+.|++++. ++. .++.++|++++++++..+|
T Consensus 58 ~~lGh~~p~v~~ai~~ql-~~l~~~~--~~~~------~~~~~~~la~~l~~~~p~~~~~-v~f~~sGseA~e~AlklAr 127 (442)
T PRK13360 58 VNAGHGRPEIVEAVRAQA-GELDYAP--AFQM------GHPKAFELANRIAEIAPGGLNH-VFFTNSGSESVDTALKIAL 127 (442)
T ss_pred hccCCCCHHHHHHHHHHH-HhCCCcc--cCCc------CCHHHHHHHHHHHHhCCCCCCE-EEEeCCcHHHHHHHHHHHH
Confidence 457888877776666552 2211111 1110 01224478888999873 443 4678899999999999999
Q ss_pred HHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCC------------cEEEEEcCCCC-CC------------CCHHHHHHH
Q 001531 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG------------MKIVSVGTDAK-GN------------INIEELRKA 723 (1058)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G------------~~vv~V~~d~~-g~------------iD~e~L~~~ 723 (1058)
.|...+|.++|.+|| ...++||....+....| -.+..+|...+ .+ -++++|+++
T Consensus 128 ~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~ 207 (442)
T PRK13360 128 AYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERL 207 (442)
T ss_pred HHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHH
Confidence 886555543455666 56789997654432211 12344544311 00 125688888
Q ss_pred HHhc-CCCeEEEEEEcC-CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc--------CCcEEEeC
Q 001531 724 AEAN-RDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLN 790 (1058)
Q Consensus 724 i~~~-~~~taaV~vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~--------GaDi~~~s 790 (1058)
+..+ .+++++|+++.- +..|.+.+ .+++|.++|++||+++++|+++ .|+.+.|.+ -+|++++
T Consensus 208 l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~----tG~GrtG~~~a~~~~gv~PDivt~- 282 (442)
T PRK13360 208 VTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVI----TGFGRLGAPFAAQYFGVTPDLLTC- 282 (442)
T ss_pred HHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh----hCCCCCccchhhhhcCCCCceeee-
Confidence 8654 367888877653 34577652 2999999999999999999985 344454432 2588765
Q ss_pred CccccccCCCCCC-CceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHH
Q 001531 791 LHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1058)
Q Consensus 791 ~hKtf~~P~g~GG-Pg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1058)
.|.++ +|. | +|.+.+++++.+.+..... ...... ..+++.|+++.++++.+.|..+-++++.
T Consensus 283 -gK~l~----gG~~P-~gav~~~~~i~~~~~~~~~----------~~~~~~-~~~T~~g~pl~~aaa~a~L~~l~~~~l~ 345 (442)
T PRK13360 283 -AKGLT----NGAIP-MGAVFVSSEIHDAFMQGPE----------AGIEFF-HGYTYSGHPLACAAALATLDLYEREGLL 345 (442)
T ss_pred -eeccc----cCccc-eEEEEEcHHHHHHhhcCCc----------cccccc-cCCCCCCCHHHHHHHHHHHHHHHhCCHH
Confidence 47663 442 5 5557777776654321100 000000 0112445677777888888888777655
Q ss_pred HHHHHHHHHHHHHHHHHhcc--CCee--eccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEE
Q 001531 870 EASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTL 945 (1058)
Q Consensus 870 ~~a~~~~~~a~yL~~~L~~~--~~v~--~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~L 945 (1058)
+ +..++.+||.+.|++. ++.+ ..|. |. +.. +.+.+........+.++.++|.++|+.+... .+.+
T Consensus 346 ~---~~~~~g~~l~~~l~~l~~~~~v~~vrG~-Gl-~~~--~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~----~~~l 414 (442)
T PRK13360 346 T---RAARLAPYWEDALHSLRDAPHVIDIRNL-GL-VGA--VELAPRDGKPGKRAYEVFLKCFEKGLMIRYT----GDIL 414 (442)
T ss_pred H---HHHHHHHHHHHHHHHhhcCCCeeeeecc-ce-EEE--EEEecCCCCcchhHHHHHHHHHHCCcEEEec----CCEE
Confidence 4 4446677888888764 3221 1221 21 111 1111110000113567888999999987532 3689
Q ss_pred EEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 946 MIEPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 946 ris~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
||+|+..+|++|||+++++|.++++++
T Consensus 415 r~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 415 ALSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred EEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999988653
No 220
>PRK06541 hypothetical protein; Provisional
Probab=99.66 E-value=5.2e-14 Score=167.49 Aligned_cols=340 Identities=16% Similarity=0.182 Sum_probs=206.2
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCC-ceeeecCchHHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRA 670 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~-~~~l~~~sGa~ge~a~llair~ 670 (1058)
..+|++.+.+..++..+. ....+.....+. .+...++.+.|++++..+ ...++.++|+++.++++..+|.
T Consensus 64 ~~lGh~~p~v~~Av~~q~-~~~~~~~~~~~~--------~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~ 134 (460)
T PRK06541 64 VQVGHGRAELAEAAAKQA-GTLAFFPLWSYA--------HPPAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQ 134 (460)
T ss_pred ccCCCCCHHHHHHHHHHH-hhCcCccccccC--------CHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHH
Confidence 468888887777766653 222221100111 123457788888887532 1346788999999999999998
Q ss_pred HHHHcCCCCCCEEE-EcCCCCCccHHHHHhCCc------------EEEEEcCCCCC-----CCC--------HHHHHHHH
Q 001531 671 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAKG-----NIN--------IEELRKAA 724 (1058)
Q Consensus 671 y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G~------------~vv~V~~d~~g-----~iD--------~e~L~~~i 724 (1058)
|+...|..+|.+|| +..++||....+....|. .+..+|..... ..| ++++++.+
T Consensus 135 ~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 214 (460)
T PRK06541 135 YFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAI 214 (460)
T ss_pred HHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHH
Confidence 87655543456666 567899987665433221 13344432111 112 36788888
Q ss_pred Hhc-CCCeEEEEEEc-CCCccccc---ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc------C--CcEEEeCC
Q 001531 725 EAN-RDNLSTLMVTY-PSTHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNL 791 (1058)
Q Consensus 725 ~~~-~~~taaV~vt~-Pn~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~------G--aDi~~~s~ 791 (1058)
+++ .+++++|+++. .+..|.+. ..+++|.++|+++|+++|+|+++ .|+.+.|.+ | +|++++
T Consensus 215 ~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~----tGfGR~G~~~a~~~~gv~PDivt~-- 288 (460)
T PRK06541 215 EFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVI----CAFGRLGEMFGCERFGYVPDIITC-- 288 (460)
T ss_pred HhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh----hCCCcCchhhhhhhcCCCCCEEEe--
Confidence 643 35666666654 25667765 13999999999999999999985 344455432 3 688764
Q ss_pred ccccccCCCCCCC-ceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHH
Q 001531 792 HKTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1058)
Q Consensus 792 hKtf~~P~g~GGP-g~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1058)
.|.++ ||. .+|.++++++++..+.... ......+ ++.|++..++++.+.+..+..+++.
T Consensus 289 gK~l~-----~G~~pigav~~~~~i~~~~~~~~-------------~~~~~~~-T~~gnp~~~aaala~l~~l~~~~~~- 348 (460)
T PRK06541 289 AKGIT-----SGYSPLGAMIASDRLFEPFLDGP-------------TMFLHGY-TFGGHPVSAAVALANLDIFEREGLL- 348 (460)
T ss_pred ccccc-----CCccceeEEEEcHHHHHHhhcCC-------------CccccCC-CCCCCHHHHHHHHHHHHHHHhccHH-
Confidence 47663 443 4777778876655432100 0000111 2345667777778888887766654
Q ss_pred HHHHHHHHHHHHHHHHhcc--CCee--eccCCCccceEEEEeccccc-ccCCC--------CHHHHHHHHHHCCccccCC
Q 001531 871 ASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLK-NTAGI--------EPEDVAKRLMDYGFHGPTM 937 (1058)
Q Consensus 871 ~a~~~~~~a~yL~~~L~~~--~~v~--~~g~~~~~~~e~vv~~~~~~-~~~g~--------~~~~v~k~L~~~Gi~~~~~ 937 (1058)
++...+.++|.++|+++ ++++ +.|. |..+ .+.+..-. ..... -...+.+.|.++|+.+...
T Consensus 349 --~~~~~~g~~l~~~L~~l~~~~~v~~vrg~-Gl~~---~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~ 422 (460)
T PRK06541 349 --DHVRDNEPAFRATLEKLLDLPIVGDVRGD-GYFY---GIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRAD 422 (460)
T ss_pred --HHHHHHHHHHHHHHHHhhcCCCeEEEEec-ceEE---EEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEec
Confidence 44557788999999875 2321 2232 3222 22221000 00000 0135778899999997532
Q ss_pred CCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001531 938 SWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1058)
Q Consensus 938 ~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~ 973 (1058)
.. ..+.|||+|+..+|++|||+++++|.+++.++.
T Consensus 423 ~~-g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06541 423 DR-GDPVVQLAPPLISGQEEFDEIEQILRSVLTEAW 457 (460)
T ss_pred CC-CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 11 136899999999999999999999999987754
No 221
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.66 E-value=4.1e-14 Score=167.74 Aligned_cols=339 Identities=16% Similarity=0.203 Sum_probs=206.1
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhC--CCceeeecCchHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIR 669 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G--~~~~~l~~~sGa~ge~a~llair 669 (1058)
..+|++.+.+..++..+ +....+.. .++- ..+...++.++|++++. ++. .++.++|+++.++++..+|
T Consensus 61 ~~lGh~~p~v~~ai~~q-l~~l~~~~--~~~~------~~~~~~~la~~L~~~~p~~~~~-v~f~~sGseAve~AlklAr 130 (445)
T PRK09221 61 CNAGHGRPEIVEAVARQ-AATLDYAP--AFQM------GHPLAFELAERLAELAPGGLDH-VFFTNSGSESVDTALKIAL 130 (445)
T ss_pred ccCCCCCHHHHHHHHHH-HHhccCcc--cccc------CCHHHHHHHHHHHHhCCCCCCE-EEEeCCcHHHHHHHHHHHH
Confidence 45788877776665554 22211111 1100 01224478888999874 343 4667899999999999999
Q ss_pred HHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCC------------cEEEEEcCCC---C---CC-------CCHHHHHHH
Q 001531 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG------------MKIVSVGTDA---K---GN-------INIEELRKA 723 (1058)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G------------~~vv~V~~d~---~---g~-------iD~e~L~~~ 723 (1058)
.|...+|.++|.+|| ...++||....+....| ..+..+|... . +. .+++++++.
T Consensus 131 ~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 210 (445)
T PRK09221 131 AYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERL 210 (445)
T ss_pred HHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHH
Confidence 887655544455666 56788997654332211 1133444321 0 00 124688888
Q ss_pred HHhcC-CCeEEEEEEcC-CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc------C--CcEEEeC
Q 001531 724 AEANR-DNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLN 790 (1058)
Q Consensus 724 i~~~~-~~taaV~vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~------G--aDi~~~s 790 (1058)
+++++ +++++|+++.- +..|++.+ .+++|.++|+++|+++++|+++ .|+.+.|.+ | +|++++
T Consensus 211 i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~----tG~GRtG~~~~~~~~gv~PDi~~~- 285 (445)
T PRK09221 211 VALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVI----TGFGRLGAAFAAERFGVTPDIITF- 285 (445)
T ss_pred HHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehh----hCCCcCchhhHHHhcCCCCCEEEe-
Confidence 87653 67888888753 45677752 2999999999999999999985 355555532 3 488766
Q ss_pred CccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHH
Q 001531 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1058)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1058)
.|.+ ++|...+|.+++++++.+.+...... . .....+ + ++.|+++.++++.+.|..+-++++.
T Consensus 286 -gK~l----~gG~~Pi~av~~~~~i~~~~~~~~~~-~-------~~~~~~--~-T~~~~pl~~aaa~a~L~~i~~~~l~- 348 (445)
T PRK09221 286 -AKGL----TNGAIPMGAVIASDEIYDAFMQGPEY-A-------IEFFHG--Y-TYSAHPVACAAGLATLDIYREEDLF- 348 (445)
T ss_pred -cccc----ccCcccceeeEEcHHHHHhhccCccc-c-------cccccc--c-CCCcCHHHHHHHHHHHHHHHhccHH-
Confidence 4766 34433367778887766544211000 0 000001 1 2345667777778888888666654
Q ss_pred HHHHHHHHHHHHHHHHhcc--CCee--eccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEE
Q 001531 871 ASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLM 946 (1058)
Q Consensus 871 ~a~~~~~~a~yL~~~L~~~--~~v~--~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lr 946 (1058)
++...+.++|+++|+++ ++.+ +.|. | .+. .+.+.............+.++|.++|+.+... .+.+|
T Consensus 349 --~~~~~~g~~l~~~l~~l~~~~~v~~vrg~-G-l~~--~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~----~~~lr 418 (445)
T PRK09221 349 --ERAAELAPYFEDAVHSLKGLPHVIDIRNI-G-LVA--GIELAPRPGAPGARGYEAFMKCFEKGLLVRYT----GDTIA 418 (445)
T ss_pred --HHHHHHHHHHHHHHHhhccCCCEEEEecC-c-eEE--EEEEecccccccchHHHHHHHHHHCCeEEeec----CCEEE
Confidence 45557778898888764 2321 1221 2 221 12221100001123467889999999987532 46899
Q ss_pred EEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 947 IEPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 947 is~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
|+|+..+|++|||+++++|.+++.++
T Consensus 419 ~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 419 LSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred EECCccCCHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999988664
No 222
>PRK09105 putative aminotransferase; Provisional
Probab=99.66 E-value=9.4e-15 Score=169.76 Aligned_cols=280 Identities=15% Similarity=0.179 Sum_probs=183.5
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g 713 (1058)
..++++.+++.+|.+..++..+.|++. ++.++++.+. +++++|++++..|+.+...+++.|.+++.++.++++
T Consensus 80 ~~~Lr~aia~~~~v~~e~I~it~Gs~~--ai~~~~~~l~-----~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~ 152 (370)
T PRK09105 80 EDDLRTLFAAQEGLPADHVMAYAGSSE--PLNYAVLAFT-----SPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRADG 152 (370)
T ss_pred HHHHHHHHHHHhCcChhhEEEcCChHH--HHHHHHHHHc-----CCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCCCC
Confidence 447788899999998776666666552 3444444442 256789999988877777789999999999998888
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHH--cCCEEEEeccCcccccCcCCCC---ccCCcEE
Q 001531 714 NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQVGLTSPG---YIGADVC 787 (1058)
Q Consensus 714 ~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~--~g~lv~vD~a~~~al~gl~~pg---~~GaDi~ 787 (1058)
.+|++++++.. +++++|++++|| .+|.+. +.++|.++++. +|+++++|+++.. +....... +.+.+++
T Consensus 153 ~~d~~~l~~~~----~~~~~v~l~nP~NPTG~~~-~~~~l~~l~~~~~~~~~lIvDEaY~~-f~~~~s~~~~~~~~~~vi 226 (370)
T PRK09105 153 AHDVKAMLAAD----PNAGLIYICNPNNPTGTVT-PRADIEWLLANKPAGSVLLVDEAYIH-FSDAPSVVDLVAQRKDLI 226 (370)
T ss_pred CCCHHHHHhcC----CCCCEEEEeCCCCCCCcCc-CHHHHHHHHHhCCCCcEEEEECchHH-hccCcchHHHHhhCCCEE
Confidence 89999998763 568889999995 789987 46666666543 5899999998731 22111111 1234555
Q ss_pred E-eCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001531 788 H-LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1058)
Q Consensus 788 ~-~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1058)
+ .+++|+|+.| |.++|++++++++.+.+-. ....+.+ . ....++.+++. .++
T Consensus 227 ~~~SfSK~~g~~----GlRiG~~v~~~~~i~~l~~---------------~~~~~~~-----~-~~~~aa~~~L~--~~~ 279 (370)
T PRK09105 227 VLRTFSKLYGMA----GMRLGLAAARPDLLAKLAR---------------FGHNPLP-----V-PAAAAGLASLR--DPK 279 (370)
T ss_pred EEecccHhhcCC----ccceeeeecCHHHHHHHHh---------------cCCCCcC-----H-HHHHHHHHHHh--CHH
Confidence 4 5678887544 6789999988765543310 0001111 1 11111222222 223
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCC-CCCE
Q 001531 867 GLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP-VPGT 944 (1058)
Q Consensus 867 Gl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p-~~~~ 944 (1058)
-+++..+...++.+++.+.|++. +++. .+++.+ ++++++ .+..++.+.|.++||.++.. |+ .++.
T Consensus 280 ~~~~~~~~~~~~r~~l~~~L~~~g~~~~--~~~~~f---~~~~~~-------~~~~~l~~~L~~~gI~v~~~-~~~~~~~ 346 (370)
T PRK09105 280 LVPQRRAENAAVREDTIAWLKKKGYKCT--PSQANC---FMVDVK-------RPAKAVADAMAKQGVFIGRS-WPIWPNW 346 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCcC--CCCCcE---EEEeCC-------CCHHHHHHHHHHCCcEEecC-CCCCCCe
Confidence 34445556667788888999874 3332 222322 345542 36688999999999988432 33 3689
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHHHH
Q 001531 945 LMIEPTESESKEELDRYCDALISIR 969 (1058)
Q Consensus 945 Lris~te~~t~eeid~fi~aL~~i~ 969 (1058)
+||++. +++++++|+++|+++.
T Consensus 347 ~Ris~~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 347 VRVTVG---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred EEEEcC---CHHHHHHHHHHHHHHh
Confidence 999985 5789999999998764
No 223
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.66 E-value=1e-14 Score=170.08 Aligned_cols=277 Identities=17% Similarity=0.181 Sum_probs=183.0
Q ss_pred HhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 001531 205 IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1058)
Q Consensus 205 ~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~ 284 (1058)
..+|..+...++++.+++++|.+. ..++.+|+.++++++.++ . ++||+|+++...|+++...++. .|++++
T Consensus 72 ~~~g~~~l~~~l~~~l~~~~g~~~--~i~~~sG~~a~~~a~~~~-~--~~gd~vi~~~~~~~~~~~~~~~----~g~~~~ 142 (385)
T TIGR01825 72 TIAGTLRLHEELEEKLAKFKKTEA--ALVFQSGFNTNQGVLSAL-L--RKGDIVLSDELNHASIIDGLRL----TKATKK 142 (385)
T ss_pred cccCCcHHHHHHHHHHHHHhCCCc--EEEECcHHHHHHHHHHHh-C--CCCCEEEEEccccHHHHHHHHh----cCCceE
Confidence 356777788889999999999753 456677777777655554 2 3799999999999999877653 355544
Q ss_pred E---eCchhhhc-cC----CCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCC---------CCc
Q 001531 285 V---SDLKDIDY-KS----GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP---------PGE 346 (1058)
Q Consensus 285 ~---v~~~~l~~-l~----~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~---------p~~ 346 (1058)
. +|++++++ +. +++++|++..+ |.+|.+.|+++|.++||++|+++++| +..+.+.+.. .-.
T Consensus 143 ~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~D-e~~~~~~~~~~~~~~~~~~~~~ 221 (385)
T TIGR01825 143 IYKHADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVD-DAHGSGVMGEAGRGTVHHFGLE 221 (385)
T ss_pred EeCCCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEE-CcccccCcCCCCCccHhhcCCC
Confidence 3 45566655 32 36777777664 78999999999999999999999994 4444443321 112
Q ss_pred ccceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhH
Q 001531 347 LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA 425 (1058)
Q Consensus 347 ~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~ 425 (1058)
.+.||++++. |.|+.+ + |+++.++++.+.+... ..+ | .-++ ..++..
T Consensus 222 ~~~~i~~~s~sK~~~~~------g-G~~~~~~~~~~~~~~~---------~~~-~-------------~~~~--~~~~~~ 269 (385)
T TIGR01825 222 DKVDIQVGTLSKAIGVV------G-GYAAGHKELIEYLKNR---------ARP-F-------------LFST--AQPPAV 269 (385)
T ss_pred cCCcEEEEeccHHhhcC------C-CEEecCHHHHHHHHHh---------Ccc-c-------------cccC--CCCHHH
Confidence 5688988987 888532 2 6788777766654100 000 0 0000 001122
Q ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC---HHHHHHHHHHcCceeeec
Q 001531 426 LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV 502 (1058)
Q Consensus 426 l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~---~~~l~~~L~~~GI~~~~~ 502 (1058)
..+..+++ ..+... .++.++..++.+++.+.|+++| +++..+. .+.+.+..+. ..++.+.|.++||.++..
T Consensus 270 ~~a~~~al--~~~~~~--~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~ 343 (385)
T TIGR01825 270 VAALAAAV--DELQRS--PELMERLWDNTRFFKAGLGKLG-YDTGGSE-TPITPVVIGDEKAAQEFSRRLFDEGIFAQSI 343 (385)
T ss_pred HHHHHHHH--HHHhcC--HHHHHHHHHHHHHHHHHHHHcC-CCCCCCC-CCEEEEEECCHHHHHHHHHHHHHCCcEEccc
Confidence 23333433 222121 2466777888999999999887 8766321 1123333332 568999999999987431
Q ss_pred -------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 503 -------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 503 -------~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
..+.+|++++.+++++|+++++++|..
T Consensus 344 ~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~ 377 (385)
T TIGR01825 344 VFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEK 377 (385)
T ss_pred CCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHH
Confidence 126799999999999999999999863
No 224
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.66 E-value=1e-14 Score=170.98 Aligned_cols=297 Identities=16% Similarity=0.170 Sum_probs=181.7
Q ss_pred hhcHHHHHHHHHHHHHHHhCCC--ce-eeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcE
Q 001531 627 AQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1058)
Q Consensus 627 ~qG~~~~~~el~~~lael~G~~--~~-~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~ 703 (1058)
.+|..++...+.+++.+..|.+ .. .+..++|++. ++.++++.+. .++++|+++++.++.+...+...|++
T Consensus 72 ~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~--al~~~~~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~ 144 (394)
T PRK05942 72 FEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKE--GLTHLALAYV-----NPGDVVLVPSPAYPAHFRGPLIAGAQ 144 (394)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHH--HHHHHHHHhC-----CCCCEEEEcCCCCcchHHHHHHcCCE
Confidence 4576666666777776666753 33 3554455442 2333333331 25688999998777666667889999
Q ss_pred EEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--ccHHHHHHHHHHcCCEEEEeccCcccc-cCcC
Q 001531 704 IVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLT 777 (1058)
Q Consensus 704 vv~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~al-~gl~ 777 (1058)
++.++.+.+ +.+|+++++++++ +++++|++++| |.+|.+- +++++|+++|+++|+++++|+++.... .+..
T Consensus 145 ~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~ 221 (394)
T PRK05942 145 IYPIILKPENDWLIDLSSIPEEVA---QQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQ 221 (394)
T ss_pred EEEeecCCccCCccCHHHHHHhcc---ccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCC
Confidence 999999754 4699999999986 78999999988 5789885 248999999999999999999863111 1110
Q ss_pred C------CCccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHH
Q 001531 778 S------PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1058)
Q Consensus 778 ~------pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~ 851 (1058)
. ++..+..|.+.++.|.|+. .|.++|++.+++++...+... ......++++ ..+.
T Consensus 222 ~~~~~~~~~~~~~~i~~~SfSK~~~~----~GlRiG~i~~~~~l~~~l~~~------------~~~~~~~~~~--~~q~- 282 (394)
T PRK05942 222 PTSLLEIPGAKDIGVEFHTLSKTYNM----AGWRVGFVVGNRHIIQGLRTL------------KTNLDYGIFS--ALQK- 282 (394)
T ss_pred CCChhhCCCccccEEEEecchhccCC----hhhheeeeecCHHHHHHHHHH------------HhhcccCCCH--HHHH-
Confidence 0 1111234667778888753 367799999887665543210 0000011111 1111
Q ss_pred HHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHH-HHC
Q 001531 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL-MDY 930 (1058)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L-~~~ 930 (1058)
++..++. ...+.+++..+...++.+++.+.|++. .+.+..+++.++ ++++++. +.+..++..++ .++
T Consensus 283 ---~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~f--~~~~~~~-----~~~~~~~~~~~l~~~ 350 (394)
T PRK05942 283 ---AAETALQ-LPDSYLQQVQERYRTRRDFLIQGLGEL-GWNIPPTKATMY--LWVPCPV-----GMGSTDFALNVLQKT 350 (394)
T ss_pred ---HHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeeE--EEEECCC-----CCCHHHHHHHHHHHC
Confidence 1122222 234455566666667778888888764 222222223322 4566642 35667777665 478
Q ss_pred Cccc-cCCCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001531 931 GFHG-PTMSWP--VPGTLMIEPTESESKEELDRYCDALISIR 969 (1058)
Q Consensus 931 Gi~~-~~~~~p--~~~~Lris~te~~t~eeid~fi~aL~~i~ 969 (1058)
||.+ +...|. ..+.+||++.. +.++|.++|+.+.
T Consensus 351 gV~v~~g~~f~~~~~~~iRis~~~-----~~~~l~~~l~~l~ 387 (394)
T PRK05942 351 GVVVTPGNAFGEGGEGYVRISLIA-----DCDRLGEALDRLK 387 (394)
T ss_pred CEEEeCChhhCcCCCCeEEEEecC-----CHHHHHHHHHHHH
Confidence 9986 333342 25799999952 3567777776653
No 225
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.66 E-value=3.1e-14 Score=169.46 Aligned_cols=342 Identities=13% Similarity=0.156 Sum_probs=212.2
Q ss_pred cccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCC-ceeeecCchHHHHHHHHHHHHHH
Q 001531 593 PLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAY 671 (1058)
Q Consensus 593 ~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~-~~~l~~~sGa~ge~a~llair~y 671 (1058)
.+|+|.+++..++..+. ..-.+....-+. .+...++.+.|++++... ...++.++|++++++++..+|.|
T Consensus 69 ~lGh~~p~v~~Ai~~ql-~~l~~~~~~~~~--------~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~ 139 (460)
T PRK06916 69 VHGHQVPELDEAIREQL-NKIAHSTLLGLA--------NVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQY 139 (460)
T ss_pred hcCCCCHHHHHHHHHHH-HhCCCccccccC--------CHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHH
Confidence 57888888777766652 221111100010 122447888899987532 23577889999999999999988
Q ss_pred HHHcCCCCCCEEE-EcCCCCCccHHHHHhCCc------------EEEEEcCCC-----CC-------CCCHHHHHHHHHh
Q 001531 672 HKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDA-----KG-------NINIEELRKAAEA 726 (1058)
Q Consensus 672 ~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G~------------~vv~V~~d~-----~g-------~iD~e~L~~~i~~ 726 (1058)
...+|.++|.+|| +..++||..-.+..+.|- .+..+|... .+ ..|++++++.+++
T Consensus 140 ~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 219 (460)
T PRK06916 140 WQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKE 219 (460)
T ss_pred HHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHh
Confidence 7666654566666 567899976554433221 233444321 01 1246778888877
Q ss_pred cCCCeEEEEEEc-C-CCccccc---ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc--------CCcEEEeCCcc
Q 001531 727 NRDNLSTLMVTY-P-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHK 793 (1058)
Q Consensus 727 ~~~~taaV~vt~-P-n~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~--------GaDi~~~s~hK 793 (1058)
+.+++++|+++. . ...|++. ..++++.++|+++|+++|+|+++ .|+.+.|.+ -+||+++ .|
T Consensus 220 ~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~----TG~GRtG~~~a~~~~gv~PDiv~~--gK 293 (460)
T PRK06916 220 KHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVA----TGFGRTGKMFACEHENVTPDIMTA--GK 293 (460)
T ss_pred CCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechh----hCCCcCchhhHHHhcCCCCCeeee--eh
Confidence 678999999986 3 4556664 25899999999999999999984 566666643 2688876 47
Q ss_pred ccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHH
Q 001531 794 TFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASK 873 (1058)
Q Consensus 794 tf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~ 873 (1058)
.+ ++|.-.+|.+.+++++++.+....- .... ....+++.|+++.++++.+.|..+..+++.+
T Consensus 294 ~l----~gG~~Pi~av~~~~ei~~~~~~~~~----------~~~~-~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~--- 355 (460)
T PRK06916 294 GL----TGGYLPIAITVTTDEIYNAFYGDYE----------EQKT-FFHGHSYTGNPLGCAVALANLELYEKTNLIE--- 355 (460)
T ss_pred hh----hcCccccceeeecHHHHHHhhcccc----------ccCc-cccCCCCCCCHHHHHHHHHHHHHHHhccHHH---
Confidence 66 3442247778888776543311000 0000 0011124457777888888888887776554
Q ss_pred HHHHHHHHHHHHHhcc--CCee--eccCCCccceEEEEecc-cccccCCC--C-HHHHHHHHHHCCccccCCCCCCCCEE
Q 001531 874 IAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLR-GLKNTAGI--E-PEDVAKRLMDYGFHGPTMSWPVPGTL 945 (1058)
Q Consensus 874 ~~~~~a~yL~~~L~~~--~~v~--~~g~~~~~~~e~vv~~~-~~~~~~g~--~-~~~v~k~L~~~Gi~~~~~~~p~~~~L 945 (1058)
+...+.++|.+.|+++ +.++ +.|. | .+..+-+.-+ ..+..... . ...+.+.|.++|+++.. ..+.+
T Consensus 356 ~~~~~g~~l~~~l~~l~~~~~v~~vrG~-G-lm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~----~g~~l 429 (460)
T PRK06916 356 QVARKTEYVATQLEDLFALKHVGDIRQL-G-LMVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRP----LGNTI 429 (460)
T ss_pred HHHHHHHHHHHHHHHhhcCCCeEEeecC-C-ceeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEEEe----cCCEE
Confidence 4456677888888764 2221 2332 3 2222222111 00000000 1 35788889999998753 24789
Q ss_pred EEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001531 946 MIEPTESESKEELDRYCDALISIREEIA 973 (1058)
Q Consensus 946 ris~te~~t~eeid~fi~aL~~i~~e~~ 973 (1058)
|+.|+..+|++|||.++++|.++++++.
T Consensus 430 ~~~Ppl~it~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06916 430 VFMPPLASTIDELDEMLRILYKAISDVT 457 (460)
T ss_pred EEeCCcccCHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999987643
No 226
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.66 E-value=2.4e-14 Score=167.67 Aligned_cols=306 Identities=15% Similarity=0.161 Sum_probs=184.5
Q ss_pred hcHHHHHHHHHHHHHHHhCCC---ceeeecCch-HHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcE
Q 001531 628 QGYQEMFNNLGEWLCTITGFD---SFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1058)
Q Consensus 628 qG~~~~~~el~~~lael~G~~---~~~l~~~sG-a~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~ 703 (1058)
+|..++...+.+++....|.. ...+..++| +++.. ++++.+. .++++|+++++.|+.+...++..|.+
T Consensus 67 ~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~---~~~~~~~-----~~gd~vl~~~p~y~~~~~~~~~~g~~ 138 (391)
T PRK07309 67 AGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALS---ASLTAIL-----EPGDKVLLPAPAYPGYEPIVNLVGAE 138 (391)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHH---HHHHHhc-----CCCCEEEEeCCCCcchHHHHHHcCCE
Confidence 465555555555555555653 223444444 44432 3333321 25678999988777777778899999
Q ss_pred EEEEcCCCC-CCCCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCcccc-cC-cC
Q 001531 704 IVSVGTDAK-GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG-LT 777 (1058)
Q Consensus 704 vv~V~~d~~-g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~al-~g-l~ 777 (1058)
++.++.+++ +.+|+++|++++++..+++++|++++|+ .+|..- +++++|+++|++||+++++|+++..-. .+ ..
T Consensus 139 ~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~ 218 (391)
T PRK07309 139 IVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPH 218 (391)
T ss_pred EEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCC
Confidence 999998765 4799999999997544578999999984 789863 369999999999999999999864211 01 00
Q ss_pred CC-CccCCc--EEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHH
Q 001531 778 SP-GYIGAD--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILP 854 (1058)
Q Consensus 778 ~p-g~~GaD--i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~ 854 (1058)
.+ ..+..| |+..+++|+|+.| |.++|++++++++.+.+-.. . .....+++...+.
T Consensus 219 ~~~~~~~~~~~i~~~S~SK~~g~~----GlRvG~~v~~~~~~~~~~~~------------~--~~~~~~~~~~~q~---- 276 (391)
T PRK07309 219 VSIAEYLPDQTILINGLSKSHAMT----GWRIGLIFAPAEFTAQLIKS------------H--QYLVTAATTMAQF---- 276 (391)
T ss_pred CCHHHhccCCEEEEecChhhccCc----cceeEEEEeCHHHHHHHHHH------------H--hhcccCCChHHHH----
Confidence 01 111223 6778899998655 67899999987765543100 0 0011111111121
Q ss_pred HHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHH-HCCcc
Q 001531 855 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFH 933 (1058)
Q Consensus 855 ~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~-~~Gi~ 933 (1058)
++..++. .+..-.....+...++++++.+.|++. .+.+..+.+.++ ++++++. ..+.+..+++++|. ++||.
T Consensus 277 ~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~p~gg~~--~~~~l~~---~~~~~~~~~~~~l~~~~gv~ 349 (391)
T PRK07309 277 AAVEALT-NGKDDALPMKKEYIKRRDYIIEKMTDL-GFKIIKPDGAFY--IFAKIPA---GYNQDSFKFLQDFARKKAVA 349 (391)
T ss_pred HHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEE--EEEECCC---CCCCCHHHHHHHHHHhCCEE
Confidence 1222222 122112233344456778888888875 222212223221 2445542 01235678887765 78998
Q ss_pred cc-CCCC-C-CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 934 GP-TMSW-P-VPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 934 ~~-~~~~-p-~~~~Lris~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
+. ...| + .++.+||++.. +.++++..++.|++++++.
T Consensus 350 v~pg~~f~~~~~~~iRi~~~~--~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 350 FIPGAAFGPYGEGYVRLSYAA--SMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred EeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHHHhh
Confidence 63 2223 2 25789999874 5788999999888877553
No 227
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.66 E-value=7.3e-15 Score=170.38 Aligned_cols=285 Identities=16% Similarity=0.170 Sum_probs=183.0
Q ss_pred HHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCCC
Q 001531 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1058)
Q Consensus 635 ~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g~ 714 (1058)
.++++.+++++|.+...+..++|++.. ...+++.+. ++++.|+++...|..++..+...|.+++.++.+ ++.
T Consensus 70 ~~lr~~ia~~~~~~~~~i~~t~G~~~~--l~~~~~~l~-----~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~ 141 (367)
T PRK02731 70 FELKAALAEKFGVDPERIILGNGSDEI--LELLARAYL-----GPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPAK-DYG 141 (367)
T ss_pred HHHHHHHHHHhCcCHHHEEEcCCHHHH--HHHHHHHhc-----CCCCEEEEecCCHHHHHHHHHHcCCeEEEeccc-CCC
Confidence 368888999999876556666666532 222233331 246789998876655666677899999999984 467
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHc--CCEEEEeccCccccc-CcCCCC----ccCCc-
Q 001531 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQV-GLTSPG----YIGAD- 785 (1058)
Q Consensus 715 iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~--g~lv~vD~a~~~al~-gl~~pg----~~GaD- 785 (1058)
+|+++++++++ +++++|++++|+ .+|.+. +.++|.++++.+ |+++++|+++..... +...++ +...+
T Consensus 142 ~~~~~l~~~~~---~~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~ 217 (367)
T PRK02731 142 HDLDAMLAAVT---PRTRLVFIANPNNPTGTYL-PAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNV 217 (367)
T ss_pred CCHHHHHHHhC---CCCcEEEEeCCCCCCCcCC-CHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCE
Confidence 99999999996 688899999995 789987 688888888875 899999998632110 100010 11223
Q ss_pred EEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHch
Q 001531 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1058)
Q Consensus 786 i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1058)
++..++.|.|+ ..|.++|++++++++.+.+... . ...+++ . ....++..++. ..
T Consensus 218 i~~~S~SK~~g----~~G~RiG~l~~~~~~~~~l~~~------------~--~~~~~~--~----~~~~~a~~~l~--~~ 271 (367)
T PRK02731 218 VVTRTFSKAYG----LAGLRVGYGIAPPEIIDALNRV------------R--QPFNVN--S----LALAAAVAALD--DD 271 (367)
T ss_pred EEEeeehHhhc----CcccceeeeeCCHHHHHHHHHc------------c--CCCCCC--H----HHHHHHHHHhC--CH
Confidence 44556777764 3477899999987665443210 0 001111 1 11112222222 12
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCC-CCCCCC
Q 001531 866 KGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM-SWPVPG 943 (1058)
Q Consensus 866 eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~-~~p~~~ 943 (1058)
+.+++..+....+.+++.+.|++. +.+. .+.+. -++++++ .+.+..++++.|.++||.+... .|..++
T Consensus 272 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~g~---~~~i~~~-----~~~~~~~~~~~L~~~gI~v~~~~~~~~~~ 341 (367)
T PRK02731 272 AFVEKSRALNAEGMAWLTEFLAELGLEYI--PSVGN---FILVDFD-----DGKDAAEAYQALLKRGVIVRPVAGYGLPN 341 (367)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCccC--CCCce---EEEEECC-----CCCCHHHHHHHHHHCCEEEEeCCCCCCCC
Confidence 234555555566777888888775 3322 11222 2456653 1357889999999999987532 233357
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001531 944 TLMIEPTESESKEELDRYCDALISIRE 970 (1058)
Q Consensus 944 ~Lris~te~~t~eeid~fi~aL~~i~~ 970 (1058)
.+||++. +.+|+++|+++|+++++
T Consensus 342 ~iRis~~---~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 342 ALRITIG---TEEENRRFLAALKEFLA 365 (367)
T ss_pred eEEEecC---CHHHHHHHHHHHHHHHh
Confidence 8999985 68999999999998753
No 228
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.66 E-value=1.6e-14 Score=166.76 Aligned_cols=283 Identities=18% Similarity=0.193 Sum_probs=185.4
Q ss_pred HHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCCC
Q 001531 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1058)
Q Consensus 635 ~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g~ 714 (1058)
.++++.++++++.+...+..++|++. ++.++++.+. .++++|+++...+..+...++..|.+++.++.++++.
T Consensus 62 ~~lr~~ia~~~~~~~~~i~it~G~~~--~l~~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~ 134 (351)
T PRK14807 62 EKLREELARYCSVVPTNIFVGNGSDE--IIHLIMLAFI-----NKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYT 134 (351)
T ss_pred HHHHHHHHHHhCCCcccEEEecCHHH--HHHHHHHHhc-----CCCCEEEEeCCChHHHHHHHHHcCCeEEEeecCCCCC
Confidence 46788899999988766666667653 2333344331 2567899987765555555788999999999987788
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCC---CccCCcEEEeC
Q 001531 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP---GYIGADVCHLN 790 (1058)
Q Consensus 715 iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~p---g~~GaDi~~~s 790 (1058)
+|+++++++++. .++++|++++|+ .+|..- +.+++.+++++++.++++|+++.. +.+-..+ ....--|++.+
T Consensus 135 ~d~~~l~~~~~~--~~~k~v~l~~p~NPtG~~~-~~~~l~~l~~~~~~~~ivDe~y~~-~~~~~~~~~~~~~~~vi~~~S 210 (351)
T PRK14807 135 YDVGSFIKVIEK--YQPKLVFLCNPNNPTGSVI-EREDIIKIIEKSRGIVVVDEAYFE-FYGNTIVDVINEFENLIVLRT 210 (351)
T ss_pred CCHHHHHHHhhc--cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCEEEEeCcchh-hcccchHHHhhhCCCEEEEec
Confidence 999999999962 478899999995 799987 699999999998899999998742 2111111 11122366788
Q ss_pred CccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHH
Q 001531 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1058)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1058)
++|+|+.| |.++|++..++++...+-.. +...+++ ...+. ++..++. ...+.+
T Consensus 211 ~SK~~~~~----GlRiG~~v~~~~~~~~~~~~--------------~~~~~~~--~~~q~----~~~~~l~---~~~~~~ 263 (351)
T PRK14807 211 LSKAFGLA----GLRVGYAVANENILKYLNLV--------------KSPYNIN--SLSQV----IALKVLR---TGVLKE 263 (351)
T ss_pred chHhcccc----hhceeeeecCHHHHHHHHHc--------------cCCCCcC--HHHHH----HHHHHHh---HHHHHH
Confidence 88988644 78899999877665443110 0111111 11222 1222222 223455
Q ss_pred HHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCC--CCCCCEEEEE
Q 001531 871 ASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS--WPVPGTLMIE 948 (1058)
Q Consensus 871 ~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~--~p~~~~Lris 948 (1058)
..+....+.+++.+.|++...+.+..+.+.+ ++++++ +..++.+.|.++|+.+.... +..++.+||+
T Consensus 264 ~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~---~~i~~~--------~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis 332 (351)
T PRK14807 264 RVNYILNERERLIKELSKIPGIKVYPSKTNF---ILVKFK--------DADYVYQGLLERGILVRDFSKVEGLEGALRIT 332 (351)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcEECcCCccE---EEEEcC--------CHHHHHHHHHHCCEEEEECCCCCCCCCeEEEE
Confidence 5555567777888888764233222222322 445553 46789999999999874322 2235789999
Q ss_pred cCCCCCHHHHHHHHHHHHHHH
Q 001531 949 PTESESKEELDRYCDALISIR 969 (1058)
Q Consensus 949 ~te~~t~eeid~fi~aL~~i~ 969 (1058)
+. +.++.++|+++|++++
T Consensus 333 ~~---~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 333 VS---SCEANDYLINGLKELL 350 (351)
T ss_pred cC---CHHHHHHHHHHHHHhh
Confidence 85 5788999999998753
No 229
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.66 E-value=8.6e-15 Score=168.81 Aligned_cols=283 Identities=17% Similarity=0.205 Sum_probs=186.2
Q ss_pred HHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCCC
Q 001531 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1058)
Q Consensus 635 ~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g~ 714 (1058)
.++++.+++.++.+...+..++|++. +..++++.+. .++++|+++++.|..+...++..|++++.++.++++.
T Consensus 63 ~~lr~aia~~~~~~~~~I~it~G~~~--al~~~~~~l~-----~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~ 135 (353)
T PRK05387 63 DALRQAIAAYYGLDPEQVFVGNGSDE--VLAHAFLAFF-----NHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLDDDFS 135 (353)
T ss_pred HHHHHHHHHHhCCCHHHEEEcCCHHH--HHHHHHHHhc-----CCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecCCCCC
Confidence 37888999999988766666666652 3444455442 2568899999877666777889999999999988888
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHc-CCEEEEeccCcccccCcCC-C--CccCCcEEEe
Q 001531 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN-GGQVYMDGANMNAQVGLTS-P--GYIGADVCHL 789 (1058)
Q Consensus 715 iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~-g~lv~vD~a~~~al~gl~~-p--g~~GaDi~~~ 789 (1058)
+|++++++ ++.+|++++|+ .+|.+. +.+++.++++.+ |+++++|+++.. +++-.. + ....-.+++.
T Consensus 136 ~d~~~l~~-------~~~~v~~~~P~NPtG~~~-~~~~~~~l~~~~~~~~livDe~y~~-~~~~~~~~~~~~~~~~i~~~ 206 (353)
T PRK05387 136 IDVEDYLR-------PNGGIIFPNPNAPTGIAL-PLAEIERILAANPDSVVVIDEAYVD-FGGESAIPLIDRYPNLLVVQ 206 (353)
T ss_pred CCHHHHHh-------cCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCcEEEEeCcccc-cCCcchHHHHhhCCCEEEEE
Confidence 99999863 23568888995 699998 688888888776 999999998642 222110 1 1123357788
Q ss_pred CCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHH
Q 001531 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1058)
Q Consensus 790 s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1058)
+++|+|++| |.++|++++++++.+.+... + ......+.+..++. ++...+. ..+.++
T Consensus 207 S~SK~~~~~----GlR~G~~~~~~~~~~~l~~~------------~-~~~~~~~~~~~~q~----~~~~~l~--~~~~~~ 263 (353)
T PRK05387 207 TFSKSRSLA----GLRVGFAIGHPELIEALNRV------------K-NSFNSYPLDRLAQA----GAIAAIE--DEAYFE 263 (353)
T ss_pred ehhHhhcch----hhhceeeecCHHHHHHHHHh------------h-ccCCCCCcCHHHHH----HHHHHhc--CHHHHH
Confidence 889988654 78899999887665443100 0 00011111111221 1112221 233455
Q ss_pred HHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCC-CCCEEEE
Q 001531 870 EASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP-VPGTLMI 947 (1058)
Q Consensus 870 ~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p-~~~~Lri 947 (1058)
+..++..++++++.+.|++. +.+ ++ +.+ . -+++.++ +.+..++.+.|.++||.+.....+ ..+.+||
T Consensus 264 ~~~~~~~~~~~~l~~~L~~~g~~~-~~-~~~-~--~~~~~~~------~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi 332 (353)
T PRK05387 264 ETRAKVIATRERLVEELEALGFEV-LP-SKA-N--FVFARHP------SHDAAELAAKLRERGIIVRHFNKPRIDQFLRI 332 (353)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCeE-CC-CcC-c--EEEEECC------CCCHHHHHHHHHHCCEEEEECCCCCCCCeEEE
Confidence 66666777888999999875 332 21 112 2 1345543 357789999999999987533222 3578999
Q ss_pred EcCCCCCHHHHHHHHHHHHHHHH
Q 001531 948 EPTESESKEELDRYCDALISIRE 970 (1058)
Q Consensus 948 s~te~~t~eeid~fi~aL~~i~~ 970 (1058)
++. +.+++++++++|++++.
T Consensus 333 s~~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 333 TIG---TDEEMEALVDALKEILA 352 (353)
T ss_pred EeC---CHHHHHHHHHHHHHHhh
Confidence 985 57999999999998754
No 230
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.66 E-value=1.2e-14 Score=170.22 Aligned_cols=302 Identities=18% Similarity=0.179 Sum_probs=185.6
Q ss_pred hcHHHHHHHHHHHHHHHhCCC--ceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEE
Q 001531 628 QGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1058)
Q Consensus 628 qG~~~~~~el~~~lael~G~~--~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv 705 (1058)
+|..++...+.+++.+.+|.. ...+..++|++. ++.++++.+. .+++.|++++..|......+...|++++
T Consensus 70 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~--al~~~~~~l~-----~~g~~Vlv~~p~y~~~~~~~~~~g~~~~ 142 (391)
T PRK08361 70 AGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYE--ATYLAFESLL-----EEGDEVIIPDPAFVCYVEDAKIAEAKPI 142 (391)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHH--HHHHHHHHhc-----CCCCEEEEcCCCCcccHHHHHHcCCEEE
Confidence 576666666666666555643 334444445432 2333333331 2467899999888777777888999999
Q ss_pred EEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcCC-Ccccccc--cHHHHHHHHHHcCCEEEEeccCcccc-cCcC-C
Q 001531 706 SVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQ-VGLT-S 778 (1058)
Q Consensus 706 ~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~--dI~eI~~lah~~g~lv~vD~a~~~al-~gl~-~ 778 (1058)
.++++++ +.+|+++++++++ +++++|++++|+ .+|.+.+ .+++|+++|+++|+++++|+++.... .+.. .
T Consensus 143 ~v~~~~~~~~~~d~~~l~~~i~---~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~ 219 (391)
T PRK08361 143 RIPLREENEFQPDPDELLELIT---KRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHY 219 (391)
T ss_pred EEecCCccCCCCCHHHHHHhcc---cccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCC
Confidence 9999765 4699999999997 678899999995 6898861 38999999999999999999863211 1100 0
Q ss_pred C-Cc--cCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHH
Q 001531 779 P-GY--IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 855 (1058)
Q Consensus 779 p-g~--~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~ 855 (1058)
+ .. ...++++.+++|+|+.| |.++|++.+++++...+-.. ......++++ ..+. +
T Consensus 220 ~~~~~~~~~~i~~~s~SK~~~~~----GlRiG~~~~~~~~~~~~~~~------------~~~~~~~~~~--~~q~----~ 277 (391)
T PRK08361 220 PMIKYAPDNTILANSFSKTFAMT----GWRLGFVIAPEQVIKDMIKL------------HAYIIGNVAS--FVQI----A 277 (391)
T ss_pred CHhhcCCCCEEEEecCchhcCCc----HhhhhhhccCHHHHHHHHHH------------HhhhccCCCh--HHHH----H
Confidence 1 11 23467888999998544 45689999987655432100 0000112221 1111 1
Q ss_pred HHHHHHHHch--hhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHH-HCCc
Q 001531 856 SYTYIAMMGS--KGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGF 932 (1058)
Q Consensus 856 a~a~l~~lG~--eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~-~~Gi 932 (1058)
+...+. .+. +.+++..+...++.+++.+.|++...+.+..+++.++ ++++++. .+.+..+++++|. ++||
T Consensus 278 ~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~--~~~~l~~----~~~~~~~l~~~l~~~~gv 350 (391)
T PRK08361 278 GIEALR-SKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFY--VFANIDE----TGMSSEDFAEWLLEKARV 350 (391)
T ss_pred HHHHhc-CCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEE--EEEECCC----CCCCHHHHHHHHHHhCCE
Confidence 111111 121 2355666666677788889998742332323333221 4456542 2457888999887 5799
Q ss_pred cccC-CCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001531 933 HGPT-MSWP--VPGTLMIEPTESESKEELDRYCDALISIRE 970 (1058)
Q Consensus 933 ~~~~-~~~p--~~~~Lris~te~~t~eeid~fi~aL~~i~~ 970 (1058)
.+.. ..|. ..+.+||++.. +.++++..++.|+++++
T Consensus 351 ~v~pg~~f~~~~~~~iRi~~~~--~~~~l~~al~~l~~~l~ 389 (391)
T PRK08361 351 VVIPGTAFGKAGEGYIRISYAT--SKEKLIEAMERMEKALE 389 (391)
T ss_pred EEcCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 8643 2233 24789999874 46667777766666543
No 231
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.66 E-value=1e-14 Score=177.32 Aligned_cols=309 Identities=11% Similarity=0.089 Sum_probs=197.5
Q ss_pred HHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHH-HHhCCcEEEEEcCCC
Q 001531 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-AAMCGMKIVSVGTDA 711 (1058)
Q Consensus 633 ~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~-a~~~G~~vv~V~~d~ 711 (1058)
.+.|.|+..++++|.+.+.+..|++++|+.++++++. +++++||++++.|.+.-.. +.+.|+++++++...
T Consensus 175 ~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~--------~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~ 246 (720)
T PRK13578 175 AAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALL--------TPGDLVLFDRNNHKSNHHGALIQAGATPVYLETAR 246 (720)
T ss_pred HHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhc--------CCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccc
Confidence 3779999999999999988999999999987777653 3678999999999887765 789999999997654
Q ss_pred C-----CCCCHHH-----HHHHHHhcCCC-------eEEEEEEcCCCcccccccHHHHHHH-HHHcCCEEEEeccCccc-
Q 001531 712 K-----GNINIEE-----LRKAAEANRDN-------LSTLMVTYPSTHGVYEEGIDEICKI-IHDNGGQVYMDGANMNA- 772 (1058)
Q Consensus 712 ~-----g~iD~e~-----L~~~i~~~~~~-------taaV~vt~Pn~~G~i~~dI~eI~~l-ah~~g~lv~vD~a~~~a- 772 (1058)
+ |.++.+. ++++|.++.++ .+++++|+|++.|++- |+++|+++ +|.++ .++||+|+..-
T Consensus 247 n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~y-di~~I~~~~~h~~~-~llvDEAhgah~ 324 (720)
T PRK13578 247 NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIY-NARQVVDKIGHLCD-YILFDSAWVGYE 324 (720)
T ss_pred cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceee-cHHHHHHHhhccCC-cEEEeCcchhhh
Confidence 2 4567655 99999876322 6899999999999998 89999998 68888 99999986321
Q ss_pred -ccCc--CCC---CccCCc----EEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCC-C
Q 001531 773 -QVGL--TSP---GYIGAD----VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLG-T 841 (1058)
Q Consensus 773 -l~gl--~~p---g~~GaD----i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~-~ 841 (1058)
+..+ ..| .+.|+| +++-|.||+++. --..+.|-++...++. ..+.+.. .+ ...+.. -
T Consensus 325 ~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~a-----lTQaS~LHvk~~~i~g-~~~~v~~-----~r-~~~al~m~ 392 (720)
T PRK13578 325 QFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAG-----FSQTSQIHKKDNHIKG-QARYCPH-----KR-LNNAFMLH 392 (720)
T ss_pred ccCcccccCChhhhhcCCCCCCeEEEEChhhcchh-----hhhHhhhhcCCccccc-ccccCCH-----HH-HHHHHHHH
Confidence 1111 012 467999 999999999852 1234556555432210 0000000 00 000000 0
Q ss_pred CCcc-chhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHH-hcc--CCeeec----------------------
Q 001531 842 IAAA-PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRL-EKH--YPILFR---------------------- 895 (1058)
Q Consensus 842 i~sa-~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L-~~~--~~v~~~---------------------- 895 (1058)
.+|+ .|...+.+-.|..+|. ++.| ++..+..+..+..++++| +.. +.+..+
T Consensus 393 qSTSPsY~LmASLDva~~~m~--~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~ 469 (720)
T PRK13578 393 ASTSPFYPLFAALDVNAKMHE--GESG-RRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRF 469 (720)
T ss_pred cCCChHHHHHHHHHHHHHHHH--HhhC-HHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhcccccc
Confidence 0111 2222222223333333 2234 334555667777777777 332 332200
Q ss_pred -----cCC--------------CccceEEEEeccccc------ccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcC
Q 001531 896 -----GVN--------------GTVAHEFIVDLRGLK------NTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPT 950 (1058)
Q Consensus 896 -----g~~--------------~~~~~e~vv~~~~~~------~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~t 950 (1058)
+.. +|. .+++.++.+. .+.|+.+..+++.|.++||.+-... ...+.+-+|
T Consensus 470 w~~~p~~~whgf~~~~~~~~~lDP~--KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d---~~~vL~l~s 544 (720)
T PRK13578 470 FSFEPGEKWHGFEGYAEDQYFVDPC--KLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVPEKCD---LNSILFLLT 544 (720)
T ss_pred cccccCccccccccccccccccCCc--eEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEEEecC---CCeEEEEeC
Confidence 000 111 1233333221 1234558999999998899875443 467888888
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q 001531 951 ESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 951 e~~t~eeid~fi~aL~~i~~e 971 (1058)
...|++++++++++|.++.+.
T Consensus 545 ~g~t~~~~~~Lv~aL~~f~~~ 565 (720)
T PRK13578 545 PAEDMAKLQQLVAMLARFEKH 565 (720)
T ss_pred CCCCHHHHHHHHHHHHHHHHh
Confidence 889999999999999987443
No 232
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.66 E-value=3e-14 Score=163.76 Aligned_cols=298 Identities=16% Similarity=0.139 Sum_probs=197.2
Q ss_pred CCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccc
Q 001531 172 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ 251 (1058)
Q Consensus 172 G~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~ 251 (1058)
+.|.+|...|+.+.+.+.+.....+.|.+- ++ .++++.+|+++|+++.++.+..|++.++..+++++.
T Consensus 25 ~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~-----~~-----~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~-- 92 (346)
T TIGR01141 25 NSNENPFGPPPKAKEALRAEADKLHRYPDP-----DP-----AELKQALADYYGVDPEQILLGNGSDEIIELLIRAFL-- 92 (346)
T ss_pred cCCCCCCCCCHHHHHHHHHhHHHhhcCCCC-----CH-----HHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhc--
Confidence 455667667776665555432223334321 12 368899999999888889888999888877766652
Q ss_pred cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHH
Q 001531 252 KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKN 321 (1058)
Q Consensus 252 ~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~ 321 (1058)
++||+|+++...|+.+...+ +..|++++.++. +++++ +++++++|++++| |.+|.+.|++++.++
T Consensus 93 -~~gd~v~~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~l 167 (346)
T TIGR01141 93 -EPGDAVLVPPPTYSMYEISA----KIHGAEVVKVPLDEDGQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAV 167 (346)
T ss_pred -CCCCEEEEcCCCHHHHHHHH----HHcCCeEEEeccCCCCCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 37899999998887655443 346888888764 33444 5678999999988 789999999999999
Q ss_pred HHhc--CcEEEEEecccc-ccCCCCC----CcccceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeec
Q 001531 322 AHAN--GVKVVMATDLLA-LTILKPP----GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSID 393 (1058)
Q Consensus 322 a~~~--galliV~a~~~s-lg~l~~p----~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d 393 (1058)
++.+ |++++++ +..+ +.....+ ...+-+|+++|. |.|+.| |..+|++++++++.+++...
T Consensus 168 ~~~~~~~~~ii~D-~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~----G~r~G~~~~~~~~~~~~~~~------- 235 (346)
T TIGR01141 168 LERTPEDALVVVD-EAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLA----GLRIGYAIANAEIIDALNKV------- 235 (346)
T ss_pred HHhCCCCcEEEEE-CchhhhcCCccHHHHHhhCCCEEEEehhhHhhhch----hhhceeeecCHHHHHHHHhc-------
Confidence 9887 9999884 3322 2111011 122335677776 888543 45689999988877765210
Q ss_pred CCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCC
Q 001531 394 SSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP 473 (1058)
Q Consensus 394 ~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~ 473 (1058)
..+.+.+ ......+.. ++.. ...++++.++..++.+++++.|++++|+++....
T Consensus 236 ---------------------~~~~~~~--~~~~~~~~~-~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 289 (346)
T TIGR01141 236 ---------------------RAPFNLS--RLAQAAAIA-ALRD--DDFIEKTVEEINAERERLYDGLKKLPGLEVYPSD 289 (346)
T ss_pred ---------------------cCCCCCC--HHHHHHHHH-HhCC--HHHHHHHHHHHHHHHHHHHHHHHhcCCCEECCCc
Confidence 0011111 111111111 1111 1247788888899999999999988338865421
Q ss_pred CccEEEEecCC-HHHHHHHHHHcCceeeecc-----CCeEEEEeccCCCHHHHHHHHHHHh
Q 001531 474 FFDTVKVKCAD-AHAIASAAYKIEMNLRVVD-----SNTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 474 ~~~~v~i~~~~-~~~l~~~L~~~GI~~~~~~-----~~~lris~~~~~t~edid~ll~al~ 528 (1058)
..-+.+..+. ..++.+.|.++||.+.... ++.+|+|++ +++|+++++++|.
T Consensus 290 -g~~~~~~~~~~~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 290 -ANFVLIRFPRDADALFEALLEKGIIVRDLNSYPGLPNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred -CCEEEEecCCCHHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecC---CHHHHHHHHHHhC
Confidence 1124455553 7889999999999886532 578999976 8999999998873
No 233
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.66 E-value=4.9e-15 Score=171.12 Aligned_cols=281 Identities=14% Similarity=0.119 Sum_probs=179.3
Q ss_pred HHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCC-CEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCC
Q 001531 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHR-NVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1058)
Q Consensus 635 ~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r-~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g 713 (1058)
.++++.+++.+|++..++..++|++. ++.++++.+. .++ ++|+++.+.+..+...++..|++++.+|.++++
T Consensus 63 ~~Lr~aia~~~~~~~~~I~it~Gs~~--~i~~~~~~~~-----~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~ 135 (354)
T PRK04635 63 PELINAYSAYAGVAPEQILTSRGADE--AIELLIRAFC-----EPGQDSIACFGPTYGMYAISAETFNVGVKALPLTADY 135 (354)
T ss_pred HHHHHHHHHHhCcCHHHEEEeCCHHH--HHHHHHHHhc-----CCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCC
Confidence 36778899999998877667677652 3334444442 133 789998876655556678899999999998778
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHc-CCEEEEeccCcccccCcCCCCcc---CCc-EE
Q 001531 714 NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN-GGQVYMDGANMNAQVGLTSPGYI---GAD-VC 787 (1058)
Q Consensus 714 ~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~-g~lv~vD~a~~~al~gl~~pg~~---GaD-i~ 787 (1058)
.+|++.++ ++ +++++|++++|| .+|.+- +.+++.++++.. ++++++|+++.. +........+ ... ++
T Consensus 136 ~~~~~~l~-~~----~~~~li~i~nP~NPTG~~~-~~~~l~~l~~~~~~~~vivDeay~~-~~~~~s~~~~~~~~~~~iv 208 (354)
T PRK04635 136 QLPLDYIE-QL----DGAKLVFICNPNNPTGTVI-DRADIEQLIEMTPDAIVVVDEAYIE-FCPEYSVADLLASYPNLVV 208 (354)
T ss_pred CCCHHHHH-hc----cCCCEEEEeCCCCCCCccC-CHHHHHHHHHhCCCcEEEEeCchHh-hccCcchHHHHhhCCCEEE
Confidence 89999987 33 578899999995 799998 688888888763 699999998631 1111010011 111 45
Q ss_pred EeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001531 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1058)
Q Consensus 788 ~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1058)
..+++|+|+. .|.++|++++++++.+.+-. .. ...+++. ....++.+++...|.+-
T Consensus 209 ~~S~SK~~~l----~GlRlG~~i~~~~~~~~l~~-~~-------------~~~~~~~------~~~~~a~~~l~~~~~~~ 264 (354)
T PRK04635 209 LRTLSKAFAL----AGARCGFTLANEELIEILMR-VI-------------APYPVPL------PVSEIATQALSEAGLAR 264 (354)
T ss_pred EechHHHhhh----hHHHHhhhhCCHHHHHHHHh-hc-------------CCCCCCH------HHHHHHHHHHhcccHHH
Confidence 6678898853 36789999988766554311 00 0011111 11112233333222233
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCC-CCCCCEEE
Q 001531 868 LTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-WPVPGTLM 946 (1058)
Q Consensus 868 l~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~-~p~~~~Lr 946 (1058)
+++..+....+++++.+.|++...+.+..+.+.+ ++++++ +..++.+.|.++||.+.... +..++.+|
T Consensus 265 ~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f---~~~~~~--------~~~~~~~~l~~~gv~v~~~~~~~~~~~lR 333 (354)
T PRK04635 265 MKFQVLDLNAQGARLQAALSMYGGAKVLEGNGNY---VLAKFD--------DVDAVFKALWDAGIVARAYKDPRLANCIR 333 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceECCCCCcE---EEEECC--------CHHHHHHHHHHCCEEEEECCCCCCCCeEE
Confidence 4444455556778888999875212221222322 445543 45788889999999875332 22457899
Q ss_pred EEcCCCCCHHHHHHHHHHHHH
Q 001531 947 IEPTESESKEELDRYCDALIS 967 (1058)
Q Consensus 947 is~te~~t~eeid~fi~aL~~ 967 (1058)
|++ .+.+|+++|+++|++
T Consensus 334 is~---~~~e~~~~l~~al~~ 351 (354)
T PRK04635 334 FSF---SNRAETDKLIGLIRN 351 (354)
T ss_pred EEe---CCHHHHHHHHHHHHH
Confidence 997 478999999999975
No 234
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.66 E-value=3.1e-14 Score=167.70 Aligned_cols=329 Identities=13% Similarity=0.181 Sum_probs=203.4
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhC--CCceeeecCchHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIR 669 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G--~~~~~l~~~sGa~ge~a~llair 669 (1058)
..+|+|.+.+..++..+. ....+..+.-+. .+...++.+.|+++++ ++. .++.++|++++++++..+|
T Consensus 52 ~~lGh~~p~i~~ai~~q~-~~~~~~~~~~~~--------~~~~~~lae~L~~~~p~~~~~-v~f~~SGseA~e~AlklAr 121 (422)
T PRK05630 52 AAHGHGHPRLKAAAHKQI-DTMSHVMFGGLT--------HEPAIKLTRKLLNLTDNGLDH-VFYSDSGSVSVEVAIKMAL 121 (422)
T ss_pred hcCCCCCHHHHHHHHHHH-HhCCCcccCCcC--------CHHHHHHHHHHHhhCCCCcCE-EEEeCCcHHHHHHHHHHHH
Confidence 357888777766665552 221121110010 1223478888999875 333 4678899999999999999
Q ss_pred HHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCCc-------------EEEEEcCCCCCCCC-------HHHHHHHHHhcC
Q 001531 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------------KIVSVGTDAKGNIN-------IEELRKAAEANR 728 (1058)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G~-------------~vv~V~~d~~g~iD-------~e~L~~~i~~~~ 728 (1058)
.|...+|..+|.+|+ ...++||..-.+....+- .+..+|.......+ .+.+++.+.
T Consensus 122 ~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--- 198 (422)
T PRK05630 122 QYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLID--- 198 (422)
T ss_pred HHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHh---
Confidence 887666654566666 467899976554433221 22334432111112 244555554
Q ss_pred CCeEEEEEEc--CCCccccc---ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc------C--CcEEEeCCcccc
Q 001531 729 DNLSTLMVTY--PSTHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNLHKTF 795 (1058)
Q Consensus 729 ~~taaV~vt~--Pn~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~------G--aDi~~~s~hKtf 795 (1058)
+++++|+++. ....|++. ..+++|.++|++||+++|+|+++ .|+.+.|.+ | +||+++ .|.+
T Consensus 199 ~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~----tG~GrtG~~~a~~~~gv~PDi~t~--gK~l 272 (422)
T PRK05630 199 ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIA----TGFGRTGELFATLAAGVTPDIMCV--GKAL 272 (422)
T ss_pred hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecce----eCCCcCchhhHHHhcCCCCCeeee--echh
Confidence 6899998886 23456653 25899999999999999999985 455566542 3 678865 4766
Q ss_pred ccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHH
Q 001531 796 CIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIA 875 (1058)
Q Consensus 796 ~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~ 875 (1058)
+ +|-+.+|.+++++++.+.+.... .... ....+++.|+++.++++.+.+..+.++.+.+ +.
T Consensus 273 ~----gG~~p~~av~~~~~i~~~~~~~~-----------~~~~-~~h~~T~~g~Pla~aaa~aaL~~l~~~~~~~---~~ 333 (422)
T PRK05630 273 T----GGFMSFAATLCTDKVAQLISTPN-----------GGGA-LMHGPTFMANPLACAVAHASLEIIETGMWRK---QV 333 (422)
T ss_pred h----cCccccceeeccHHHHHHHhccC-----------CCCc-cccCCCCcCCHHHHHHHHHHHHHHHhCcHHH---HH
Confidence 3 33256778888877765542110 0000 0011124467777778888888887665533 45
Q ss_pred HHHHHHHHHHHhcc--CCee--eccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCC
Q 001531 876 ILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTE 951 (1058)
Q Consensus 876 ~~~a~yL~~~L~~~--~~v~--~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te 951 (1058)
..+.++|++.|+++ ++.+ +.|. | .+ +-+.+.. ..+...+.+.+.++|+.+... .+.+||.|+.
T Consensus 334 ~~~g~~l~~~L~~l~~~~~v~~vRg~-G-l~--~~ie~~~-----~~~~~~~~~~~~~~Gl~~~~~----g~~l~~~PpL 400 (422)
T PRK05630 334 KRIEAELIAGLSPLAHLPGVADVRVL-G-AI--GVVEMEQ-----PVDMEEATQAAVDHGVWLRPF----GRLVYVMPPY 400 (422)
T ss_pred HHHHHHHHHHHHHhhcCCCeeeeecc-c-cE--EEEEECC-----cccHHHHHHHHHHCCeEEEec----CCEEEEECCc
Confidence 56677888877653 2211 1221 2 12 2233321 123568899999999987532 3789999999
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 001531 952 SESKEELDRYCDALISIREE 971 (1058)
Q Consensus 952 ~~t~eeid~fi~aL~~i~~e 971 (1058)
..|++|||+++++|.+++.+
T Consensus 401 ~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 401 ITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred cCCHHHHHHHHHHHHHHHhc
Confidence 99999999999999988753
No 235
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.66 E-value=4.9e-14 Score=165.72 Aligned_cols=286 Identities=16% Similarity=0.202 Sum_probs=181.5
Q ss_pred HHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCC------------
Q 001531 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG------------ 701 (1058)
Q Consensus 635 ~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G------------ 701 (1058)
.++.++|+++.+.+.+ +..++|++++++++..+|.|...++..++++|+ +..++||.........|
T Consensus 85 ~~l~~~l~~~~~~~~~-~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~ 163 (403)
T PRK05093 85 LRLAKKLIDATFAERV-FFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKP 163 (403)
T ss_pred HHHHHHHHhhCCCCEE-EEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCC
Confidence 4788999998876644 667899999988888888875433222344454 56789998764332211
Q ss_pred cEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCC-ccccc---ccHHHHHHHHHHcCCEEEEeccCcccccCcC
Q 001531 702 MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPST-HGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLT 777 (1058)
Q Consensus 702 ~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~-~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~gl~ 777 (1058)
.+++.++. .|+++++++++ +++++|+++..+. .|++. +.+++|+++|++||+++++|+++. ++ .
T Consensus 164 ~~~~~~~~-----~d~~~l~~~l~---~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~---g 231 (403)
T PRK05093 164 ADITHVPF-----NDLAAVKAVID---DHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQT-GM---G 231 (403)
T ss_pred CCcEEeCC-----CCHHHHHHHhc---CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CC---C
Confidence 12344444 38999999996 6899999985454 45542 249999999999999999999864 22 2
Q ss_pred CCC------cc--CCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhh
Q 001531 778 SPG------YI--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (1058)
Q Consensus 778 ~pg------~~--GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~ 849 (1058)
+.| .. ..|+.++ .|+++ +|..+|++++++++.+.+..... . ...+ ++
T Consensus 232 ~~g~~~~~~~~~~~pdi~s~--sK~l~-----~G~rig~vv~~~~i~~~l~~~~~-------------~-~t~~----~~ 286 (403)
T PRK05093 232 RTGDLFAYMHYGVTPDILTS--AKALG-----GGFPIGAMLTTAEIASHFKVGTH-------------G-STYG----GN 286 (403)
T ss_pred CCccchhhhhcCCCCCEEEe--ccccc-----CCcceEEEEEcHHHHhhcCCCCC-------------C-CCCC----CC
Confidence 222 12 3566544 58774 45779999999887665532110 0 1112 23
Q ss_pred HHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCccceEEEEecccccccCCCCHHHHH
Q 001531 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA 924 (1058)
Q Consensus 850 ~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~ 924 (1058)
...++++.+.+..+-.+.+ .++...+.+++.+.|+++ +.+. .++ .+ .+ +.+.+.+- ......+++
T Consensus 287 ~~~~~aa~a~L~~~~~~~~---~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~G-~~--~~~~l~~~---~~~~~~~~~ 356 (403)
T PRK05093 287 PLACAVAEAVFDIINTPEV---LEGVKARRQRFVDGLQKINQKYGVFSEIRG-MG-LL--IGAELKPQ---YKGRARDFL 356 (403)
T ss_pred HHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHHHHHHHHhhCCCeEeEee-Cc-eE--EEEEecCc---chhHHHHHH
Confidence 3333344444444433333 344556778888888874 2221 111 12 11 33333210 001357899
Q ss_pred HHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 925 KRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 925 k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
++|.++|+.+.... .+.+|++|+...++++|+.+++.|.+++.+
T Consensus 357 ~~l~~~Gv~v~~~g---~~~lRl~~~~~~~~~~i~~~~~~l~~~l~~ 400 (403)
T PRK05093 357 NAAAEEGVMVLVAG---PDVLRFAPSLVIEEADIDEGLARFEKAVAK 400 (403)
T ss_pred HHHHHCCeEEecCC---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999998864222 378999999999999999999999988764
No 236
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.66 E-value=8e-15 Score=167.69 Aligned_cols=271 Identities=17% Similarity=0.101 Sum_probs=176.0
Q ss_pred HHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc----
Q 001531 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 288 (1058)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~---- 288 (1058)
..++++.+++++| ..++.++.+||.++..++.++. ++||+|+++...|+++...+. .+...|++++.++.
T Consensus 34 ~~~l~~~~a~~~g--~~~~~~~~~gt~a~~~~~~~l~---~~gd~v~~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~~~~ 107 (338)
T cd06502 34 TAKLEARAAELFG--KEAALFVPSGTAANQLALAAHT---QPGGSVICHETAHIYTDEAGA-PEFLSGVKLLPVPGENGK 107 (338)
T ss_pred HHHHHHHHHHHhC--CCeEEEecCchHHHHHHHHHhc---CCCCeEEEecCcceeeecCCc-HHHHcCceEEeecCCCCc
Confidence 4566789999999 3457788888877666665552 379999999999987654321 12235888777754
Q ss_pred ---hhhhc-cCC-------CEeEEEEEcCCCcee---eccHHHHHHHHHhcCcEEEEEeccc------cccCCCCCCccc
Q 001531 289 ---KDIDY-KSG-------DVCGVLVQYPGTEGE---VLDYGDFIKNAHANGVKVVMATDLL------ALTILKPPGELG 348 (1058)
Q Consensus 289 ---~~l~~-l~~-------~t~~V~v~~pn~~G~---i~dl~~I~~~a~~~galliV~a~~~------slg~l~~p~~~G 348 (1058)
+++++ +.+ ++++|++.+||..|. +.|+++|+++||++|++++||. .+ +.+........+
T Consensus 108 ~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDe-a~~~~~~~~~~~~~~~~~~~ 186 (338)
T cd06502 108 LTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDG-ARLANAAAALGVALKTYKSG 186 (338)
T ss_pred CCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeech-HHHHHHHHhcCCCHHHHHhc
Confidence 34555 543 688999999966675 4578899999999999999942 21 112100011357
Q ss_pred ceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHH
Q 001531 349 ADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALL 427 (1058)
Q Consensus 349 aDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~ 427 (1058)
+|+++.+. |+|+.| +.++++.++++.+++.... .+ ..++.+. .++.
T Consensus 187 ~d~~~~s~sK~~~~~------~g~~~~~~~~~~~~~~~~~--------------------~~----~~~~~~~---~~~~ 233 (338)
T cd06502 187 VDSVSFCLSKGGGAP------VGAVVVGNRDFIARARRRR--------------------KQ----AGGGMRQ---SGFL 233 (338)
T ss_pred CCEEEEeccccCCCc------cceEEECCHHHHHHHHHHH--------------------HH----hCCChhh---HHHH
Confidence 89999887 877654 3356777777766652100 00 0011111 1221
Q ss_pred HHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC----HHHHHHHHH---HcCceee
Q 001531 428 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD----AHAIASAAY---KIEMNLR 500 (1058)
Q Consensus 428 a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~----~~~l~~~L~---~~GI~~~ 500 (1058)
+ .++ +..+...+..+..++..++++++.+.|+++| +.+.. +..+.+.+..+. ..++.+.|. ++|+.+.
T Consensus 234 ~-~a~--~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~-~~~~~~~v~~~~~~~~~~~l~~~l~~~~~~gi~~~ 308 (338)
T cd06502 234 A-AAG--LAALENDLWLRRLRHDHEMARRLAEALEELG-GLESE-VQTNIVLLDPVEANAVFVELSKEAIERRGEGVLFY 308 (338)
T ss_pred H-HHH--HHHhcCchHHHHHHHHHHHHHHHHHHHHhcC-CCccc-ccCCeEEEecCCccHHHHHHHHHHHHhhhCCEEEE
Confidence 1 122 1333344566777888999999999999987 64432 233344555442 334555553 6799887
Q ss_pred eccCCeEEEEeccCCCHHHHHHHHHHHh
Q 001531 501 VVDSNTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 501 ~~~~~~lris~~~~~t~edid~ll~al~ 528 (1058)
....+.+|++++..+|++|+++++++|.
T Consensus 309 ~~~~~~lRi~~~~~~~~~~i~~~~~~l~ 336 (338)
T cd06502 309 AWGEGGVRFVTHWDTTEEDVDELLSALK 336 (338)
T ss_pred ecCCCeEEEEeecCCCHHHHHHHHHHHh
Confidence 6655899999999999999999999985
No 237
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.65 E-value=8.6e-14 Score=164.51 Aligned_cols=330 Identities=18% Similarity=0.209 Sum_probs=200.1
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHh----CCC-ceeeecCchHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTIT----GFD-SFSLQPNAGAAGEYAGLM 666 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~----G~~-~~~l~~~sGa~ge~a~ll 666 (1058)
..||++.+++..++..+. ....+.....+. .+...++.+.|++++ +++ .+.+..+||++++++++.
T Consensus 51 ~~lGh~~p~v~~ai~~ql-~~~~~~~~~~~~--------~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~Alk 121 (425)
T PRK09264 51 LNYGHNNPVLKQALIDYL-QRDGITHGLDMH--------TTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALK 121 (425)
T ss_pred ccCCCCCHHHHHHHHHHH-HhcccccccccC--------cHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHH
Confidence 468888888877776652 211121100111 122446777888865 243 233556899999988888
Q ss_pred HHHHHHHHcCCCCCCEEE-EcCCCCCccHHHHHhC---------Cc---EEEEEcCCCCC---CCCHHHHHHHHHhcC--
Q 001531 667 VIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMC---------GM---KIVSVGTDAKG---NINIEELRKAAEANR-- 728 (1058)
Q Consensus 667 air~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~---------G~---~vv~V~~d~~g---~iD~e~L~~~i~~~~-- 728 (1058)
.+|.|. +|.+|| +..++||....+.... |. .++.+|..... .-|+++|++++++++
T Consensus 122 lAr~~t------gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~ 195 (425)
T PRK09264 122 LARKVT------GRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSG 195 (425)
T ss_pred HHHHhc------CCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCC
Confidence 888762 344555 5678999876553321 11 35566653211 137889999997542
Q ss_pred -CCeEEEEEEcC-CCccccc---ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCc--------cCCcEEEeCCcccc
Q 001531 729 -DNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY--------IGADVCHLNLHKTF 795 (1058)
Q Consensus 729 -~~taaV~vt~P-n~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~--------~GaDi~~~s~hKtf 795 (1058)
+++++|+++.- +..|++. ..+++|+++|++||+++++|+++. |+.+.|. ..+|++++ .|.+
T Consensus 196 ~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t----G~GrtG~~~~~~~~~v~PDi~t~--~K~l 269 (425)
T PRK09264 196 VDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQA----GCGRTGTFFSFERAGITPDIVTL--SKSI 269 (425)
T ss_pred CCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhh----CCccccHHHHHhhcCCCCCEEEe--cccc
Confidence 46788877653 4456543 269999999999999999999853 4444442 24688766 4776
Q ss_pred ccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHH-HHHchhhHHHHHHH
Q 001531 796 CIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI-AMMGSKGLTEASKI 874 (1058)
Q Consensus 796 ~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l-~~lG~eGl~~~a~~ 874 (1058)
+ +||-.+|++.+++++..+.++.. + + ++.|++..++++.+.+ ..+..+++. ++
T Consensus 270 ~----~~G~pigav~~~~~i~~~~~~~~--------------~-~----T~~gnp~~~aaa~a~l~~~~~~~~l~---~~ 323 (425)
T PRK09264 270 S----GYGLPMALVLIKPELDVWKPGEH--------------N-G----TFRGNNLAFVTATAALEEYWSDDAFE---KE 323 (425)
T ss_pred C----CCccceEEEEEchhhhccCCCcc--------------C-C----CCCCCHHHHHHHHHHHHHHHhhhHHH---HH
Confidence 3 32444788888877632211100 0 1 1223444444454555 344433333 34
Q ss_pred HHHHHHHHHHHHhcc---CC-ee--eccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEE
Q 001531 875 AILNANYMAKRLEKH---YP-IL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIE 948 (1058)
Q Consensus 875 ~~~~a~yL~~~L~~~---~~-v~--~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris 948 (1058)
...+.++|.++|+++ ++ +. ..| .| .+ +.+.+.+ ......+.+.|.++|+.+..... ....||++
T Consensus 324 ~~~~g~~l~~~l~~l~~~~~~~~~~vrg-~G-l~--~~i~l~~-----~~~~~~l~~~~~~~Gv~~~~~~~-~~~~lr~~ 393 (425)
T PRK09264 324 VKAKGELVRERLEEIAAKYPGLGAEVRG-RG-MM--QGIDFGD-----GELAGKIAAEAFENGLIIETSGP-EDEVVKLL 393 (425)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceeccee-cc-cE--EEEEecC-----hHHHHHHHHHHHHCCCEEeccCC-CCCEEEEe
Confidence 445667788777653 33 11 112 12 22 2343321 12356889999999998753221 13789999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHhcC
Q 001531 949 PTESESKEELDRYCDALISIREEIAQIENG 978 (1058)
Q Consensus 949 ~te~~t~eeid~fi~aL~~i~~e~~~~~~~ 978 (1058)
|+..+|++|||++++.|.++++++.+.|+.
T Consensus 394 p~l~~t~~ei~~~~~~l~~~l~~~~~~~~~ 423 (425)
T PRK09264 394 PPLTIDEEELEEGLDILEEAVAEVLAEEES 423 (425)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhcccc
Confidence 999999999999999999999888765443
No 238
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.65 E-value=1.5e-14 Score=169.49 Aligned_cols=213 Identities=19% Similarity=0.205 Sum_probs=155.3
Q ss_pred HHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---h
Q 001531 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---D 290 (1058)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~---~ 290 (1058)
.++++.+|++.|.+. +.++.+|++++.++++++ . ++||+|+++...|+.+...+...++..|++++.++.. +
T Consensus 67 ~~Le~~iA~~~g~~~--~l~~~sG~~Ai~~al~~l-l--~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~ 141 (400)
T PRK06234 67 TEVENKLALLEGGEA--AVVAASGMGAISSSLWSA-L--KAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTSNLEE 141 (400)
T ss_pred HHHHHHHHHHhCCCc--EEEEcCHHHHHHHHHHHH-h--CCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCCCHHH
Confidence 457789999999864 778999998888777665 2 3899999999999998888766667789999998764 4
Q ss_pred hhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhc--CcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCC
Q 001531 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN--GVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 365 (1058)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~--galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~ 365 (1058)
+++ ++++|++|++.+| |++|.+.|+++|+++||++ |++++|| +.++.+....|.++|+||+++|. |.|+++
T Consensus 142 l~~~i~~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livD-ea~~~~~~~~~l~~g~Divv~S~sK~l~g~--- 217 (400)
T PRK06234 142 VRNALKANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVD-NTFCTPYIQRPLQLGADVVVHSATKYLNGH--- 217 (400)
T ss_pred HHHHhccCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEE-CCCCchhcCCchhhCCcEEEeeccccccCC---
Confidence 555 7788999999998 6899999999999999997 8999994 45666666667788999999998 877633
Q ss_pred CCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHH
Q 001531 366 GGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1058)
Q Consensus 366 GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ 445 (1058)
|...+|++++++++.+++- ..+ . +..- .. +.++ ..+. +...|-+-+..
T Consensus 218 g~~~gG~v~~~~~~~~~l~--~~~---------------------~-~~~~-g~--~l~p---~~a~--l~~~~l~tl~~ 265 (400)
T PRK06234 218 GDVIAGFVVGKEEFINQVK--LFG---------------------I-KDMT-GS--VIGP---FEAF--LIIRGMKTLQI 265 (400)
T ss_pred CCceeEEEEecHHHHHHHH--HHH---------------------H-HHhc-CC--CCCH---HHHH--HHHhccCcHHH
Confidence 2233689999887766541 000 0 0000 00 0011 1222 23344445556
Q ss_pred HHHHHHHHHHHHHHHHhcCCCe
Q 001531 446 IAQRVHGLAGTFALGLKKLGTV 467 (1058)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~G~~ 467 (1058)
+.++..+++.++++.|++.+.+
T Consensus 266 r~~~~~~na~~~a~~L~~~~~V 287 (400)
T PRK06234 266 RMEKHCKNAMKVAKFLESHPAV 287 (400)
T ss_pred HHHHHHHHHHHHHHHHHcCCCe
Confidence 7777889999999999987534
No 239
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.65 E-value=5.1e-14 Score=167.70 Aligned_cols=339 Identities=14% Similarity=0.169 Sum_probs=212.1
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhC--CCceeeecCchHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIR 669 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G--~~~~~l~~~sGa~ge~a~llair 669 (1058)
..+|++.+.+..++..+ +....+.....+. .+...++.+.|++++. ++. .++.++|++++++++..+|
T Consensus 59 ~~lGh~~p~v~~Ai~~q-l~~l~~~~~~~~~--------~~~~~~lae~L~~~~p~~~~~-v~f~~sGsEAve~AlKlAr 128 (466)
T PRK07030 59 NVFGHANPRINQRIKDQ-VDQLEHVILAGFS--------HEPVIELSERLVKITPPGLSR-CFYADNGSSAIEVALKMSF 128 (466)
T ss_pred hcCCCCCHHHHHHHHHH-HHhcCCccccccC--------CHHHHHHHHHHHHhCCCCcCE-EEEeCCcHHHHHHHHHHHH
Confidence 35788887776665555 2221111110111 1234578888988874 333 4678899999999999888
Q ss_pred HHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCCc------------EEEEEcCCCC-----C-------CCCHHHHHHHH
Q 001531 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAK-----G-------NINIEELRKAA 724 (1058)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G~------------~vv~V~~d~~-----g-------~iD~e~L~~~i 724 (1058)
.|...+|..+|.+|| ...++||..-.+....|- .+..+|.... + .-+++++++.+
T Consensus 129 ~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~ 208 (466)
T PRK07030 129 HYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTL 208 (466)
T ss_pred HHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHH
Confidence 887667754566665 567899976555433221 2334443211 1 11367788888
Q ss_pred HhcCCCeEEEEEEc--CCCccccc---ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc--------CCcEEEeCC
Q 001531 725 EANRDNLSTLMVTY--PSTHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNL 791 (1058)
Q Consensus 725 ~~~~~~taaV~vt~--Pn~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~--------GaDi~~~s~ 791 (1058)
+++.+++++|+++. ....|++. ..+++|.++|+++|+++|+|++ +.|+.+.|.+ -+|++++
T Consensus 209 ~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV----~TGfGRtG~~~a~~~~gv~PDiv~~-- 282 (466)
T PRK07030 209 AEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEI----AVGFGRTGTMFACEQAGIRPDFLCL-- 282 (466)
T ss_pred HhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeeh----hhCcCccccchHHHhcCCCCCEEee--
Confidence 77678999999886 24456654 2589999999999999999998 5677677653 2689887
Q ss_pred ccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHH
Q 001531 792 HKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEA 871 (1058)
Q Consensus 792 hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~ 871 (1058)
.|.++ +|--.+|.+++++++++.+.... ...... ...+++.|+++.++++.+.|..+-++++.+
T Consensus 283 gKgl~----gG~~Pi~av~~~~ei~~~~~~~~----------~~~~~~-~h~~T~~gnpla~aaa~a~L~~i~~~~l~~- 346 (466)
T PRK07030 283 SKALT----GGYLPLAAVLTTDTVYQAFYDDY----------PTLRAF-LHSHSYTGNPLACAAALATLDIFEQDNVIE- 346 (466)
T ss_pred ehhcc----CCcccceEEEecHHHHHHHhccc----------cccccc-ccCCCCCCCHHHHHHHHHHHHHHHhcCHHH-
Confidence 47663 33123777778877665431100 000000 011224467788888888888887776554
Q ss_pred HHHHHHHHHHHHHHHhcc--CCee--eccCCCccceEEEEecc--ccccc-CCC---CHHHHHHHHHHCCccccCCCCCC
Q 001531 872 SKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLR--GLKNT-AGI---EPEDVAKRLMDYGFHGPTMSWPV 941 (1058)
Q Consensus 872 a~~~~~~a~yL~~~L~~~--~~v~--~~g~~~~~~~e~vv~~~--~~~~~-~g~---~~~~v~k~L~~~Gi~~~~~~~p~ 941 (1058)
+.....++|+++|+++ ++.+ +.|. |.. . .+.+. +..++ ... ...++.+++.++|+.+...
T Consensus 347 --~~~~~G~~l~~~L~~l~~~~~v~~vrG~-Gl~-~--gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~---- 416 (466)
T PRK07030 347 --NNRALARRMAEATAHLADHPHVAEVRQT-GMI-L--AIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPL---- 416 (466)
T ss_pred --HHHHHHHHHHHHHHHHhcCCCEEEeEec-eeE-E--EEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEec----
Confidence 3446677888888764 3221 2231 322 1 22221 00000 000 1246888899999987532
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 942 PGTLMIEPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 942 ~~~Lris~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
.+.+++.|+..+|++|||.+++++.++++++
T Consensus 417 g~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 417 GSVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred CCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 3689999999999999999999999999886
No 240
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.65 E-value=2.7e-14 Score=165.55 Aligned_cols=271 Identities=20% Similarity=0.148 Sum_probs=183.3
Q ss_pred HHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhh-
Q 001531 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDID- 292 (1058)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~~l~- 292 (1058)
.++++.+|++.+ .++.++.+|++++.+++.++ + ++||+||++...|..+...++..++..|++++.++.++..
T Consensus 54 ~~Le~~lA~l~~---~~~v~~~sG~~Ai~~~l~al-l--~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~ 127 (366)
T PRK07582 54 RALEAALGELEG---AEALVFPSGMAAITAVLRAL-L--RPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE 127 (366)
T ss_pred HHHHHHHHHHcC---CCEEEECCHHHHHHHHHHHh-c--CCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH
Confidence 456689999993 34778889998888777765 3 3899999999999887776654455689999999875432
Q ss_pred ccCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCCCCce
Q 001531 293 YKSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGPHA 370 (1058)
Q Consensus 293 ~l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~GGP~~ 370 (1058)
.+.+++++|++.+| |.+|.+.|+++|+++||++|++++|| +.++......|.++|+|++++|+ |++++| +|--+
T Consensus 128 ~~~~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD-~t~~~~~~~~p~~~g~Divv~S~sK~l~G~---~g~~~ 203 (366)
T PRK07582 128 AALAGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVD-NTTATPLGQRPLELGADLVVASDTKALTGH---SDLLL 203 (366)
T ss_pred HhccCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEE-CCCCCccccCchhcCCcEEEecccccccCC---CCeeE
Confidence 23468999999998 58899999999999999999999994 33332333456679999999998 877543 22235
Q ss_pred EEEEEe-hhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHH
Q 001531 371 AFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQR 449 (1058)
Q Consensus 371 G~l~~~-~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~ 449 (1058)
|+++++ +++.+++. ..|+..+. +..++ .+ |+...|-+-+....++
T Consensus 204 G~v~~~~~~l~~~l~-------------------------~~~~~~g~----~~~~~---~a--~l~~r~l~tl~~R~~~ 249 (366)
T PRK07582 204 GYVAGRDPELMAAVE-------------------------RWRLLAGA----IPGPF---EA--WLAHRSLGTLGLRFAR 249 (366)
T ss_pred EEEEcCcHHHHHHHH-------------------------HHHHHhCC----CCCHH---HH--HHHHhccccHHHHHHH
Confidence 888875 45544331 00111110 01111 11 2234444456666688
Q ss_pred HHHHHHHHHHHHhcCCCeEE-c--C---CC-----------CccEEEEecCCHHHHHHHHHHcCceee--------e---
Q 001531 450 VHGLAGTFALGLKKLGTVEV-Q--G---LP-----------FFDTVKVKCADAHAIASAAYKIEMNLR--------V--- 501 (1058)
Q Consensus 450 ~~~~a~~l~~~L~~~G~~~l-~--~---~~-----------~~~~v~i~~~~~~~l~~~L~~~GI~~~--------~--- 501 (1058)
..+++..+++.|++.+.++- . + .| +-..|+|.+++.+++.+.|...++... .
T Consensus 250 ~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~ 329 (366)
T PRK07582 250 QCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELADAAAAERFVAASRLVVAATSFGGVHTSAD 329 (366)
T ss_pred HHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeCCHHHHHHHHHhCCcceecccCCCccchhh
Confidence 88999999999998754542 2 1 12 123467776565556666666566431 1
Q ss_pred --------ccCCeEEEEeccCCCHHHHHHHHHHHh
Q 001531 502 --------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 502 --------~~~~~lris~~~~~t~edid~ll~al~ 528 (1058)
+.++.||+|++..+.++.|++|.++|.
T Consensus 330 ~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~ 364 (366)
T PRK07582 330 RRARWGDAVPEGFVRLSCGIEDTDDLVADLERALD 364 (366)
T ss_pred hHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 123679999999999999999999885
No 241
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.65 E-value=7.9e-14 Score=167.19 Aligned_cols=341 Identities=14% Similarity=0.172 Sum_probs=204.6
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhC-CCc-eeeecCchHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG-FDS-FSLQPNAGAAGEYAGLMVIR 669 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G-~~~-~~l~~~sGa~ge~a~llair 669 (1058)
..||++.+.+..++..+. ....+ ++++. .+..+...++.+.|++++. .+. ..++.++|++++++++.++|
T Consensus 101 ~~lGh~hp~v~~Av~~ql-~~~~~--~~~~~-----~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr 172 (504)
T PLN02760 101 TALGGSEPRLVAAATEQL-NKLPF--YHSFW-----NRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVW 172 (504)
T ss_pred cccCCCCHHHHHHHHHHH-hhccc--eeccc-----ccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHH
Confidence 357888777766666652 22111 11110 1122345578888888853 322 24668899999999999999
Q ss_pred HHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCCcE------------EEEEcCCC-------CC------CCCHHHHHHH
Q 001531 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMK------------IVSVGTDA-------KG------NINIEELRKA 723 (1058)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G~~------------vv~V~~d~-------~g------~iD~e~L~~~ 723 (1058)
.|...+|..+|++|| ...++||.......+.|.+ +..++... .. ....++|+++
T Consensus 173 ~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~ 252 (504)
T PLN02760 173 YYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENL 252 (504)
T ss_pred HHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHH
Confidence 887655643455555 5678999865544333321 22333211 00 0113567777
Q ss_pred HHh-cCCCeEEEEEEcC-CCccccccc---HHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc------C--CcEEEeC
Q 001531 724 AEA-NRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLN 790 (1058)
Q Consensus 724 i~~-~~~~taaV~vt~P-n~~G~i~~d---I~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~------G--aDi~~~s 790 (1058)
+.+ +.+++++|+++.- +..|++.++ +++|.++|++||+++|+|++ +.|+.+.|.+ | +||+++
T Consensus 253 l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV----~TGfGRtG~~~a~e~~gv~PDivtl- 327 (504)
T PLN02760 253 ILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEV----ICAFGRLGTMFGCDKYNIKPDLVSL- 327 (504)
T ss_pred HHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecch----hhCCcccchhhHHHhcCCCCcEEEe-
Confidence 743 3456888777643 345777522 99999999999999999998 4566566543 2 688776
Q ss_pred CccccccCCCCCC-CceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHH
Q 001531 791 LHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1058)
Q Consensus 791 ~hKtf~~P~g~GG-Pg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1058)
.|.++ +|. | +|.+++++++++.+.... . ...... ..+++.|+++.++++.+.|..+-++++.
T Consensus 328 -gK~lg----gG~~P-igAv~~~~~i~d~~~~~~-~---------~~~~~~-h~~T~~gnPl~~Aaala~Le~i~~~~l~ 390 (504)
T PLN02760 328 -AKALS----SAYMP-IGAVLVSPEISDVIHSQS-N---------KLGSFA-HGFTYSGHPVSCAVALEALKIYKERNIP 390 (504)
T ss_pred -ccccc----CCccc-cceEeecHHHHhhhhccc-c---------cccCcc-cCCCCCCCHHHHHHHHHHHHHHHhCCHH
Confidence 47663 443 5 555777877766542110 0 000000 1112446777788888888888766554
Q ss_pred HHHHHHHHHHHHHHHHHhcc--CCee--eccCCCccceEEEEecccccc-cCCC-----CHHHHHHHHHHCCccccCCCC
Q 001531 870 EASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKN-TAGI-----EPEDVAKRLMDYGFHGPTMSW 939 (1058)
Q Consensus 870 ~~a~~~~~~a~yL~~~L~~~--~~v~--~~g~~~~~~~e~vv~~~~~~~-~~g~-----~~~~v~k~L~~~Gi~~~~~~~ 939 (1058)
++...+.++|+++|+++ ++++ +.|. |. + +-+.+..-.. .... -...+.+.|.++|+.+...
T Consensus 391 ---~~~~~~g~~l~~~L~~l~~~~~v~~vrG~-Gl-~--~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~-- 461 (504)
T PLN02760 391 ---EHVNKIAPRFQDGIKAFSGSPIIGEIRGT-GL-I--LGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVA-- 461 (504)
T ss_pred ---HHHHHHHHHHHHHHHHHhcCCCeeeEEeC-ce-E--EEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEec--
Confidence 44456677888888764 2321 2231 22 2 1222211000 0000 1456888899999987532
Q ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001531 940 PVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1058)
Q Consensus 940 p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~ 973 (1058)
.+.+|++|+..+|++|||++++++.+++.++.
T Consensus 462 --g~~lrl~Ppl~it~eeid~~~~~l~~al~~~~ 493 (504)
T PLN02760 462 --GDNIMMSPPLIITPEEVDELISIYGKALKATE 493 (504)
T ss_pred --CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 36799999999999999999999999887763
No 242
>PRK06105 aminotransferase; Provisional
Probab=99.65 E-value=4.6e-14 Score=168.00 Aligned_cols=343 Identities=15% Similarity=0.180 Sum_probs=207.6
Q ss_pred ccccccccCCcccccccccccccccc-cCCCCchhhhhcHHHHHHHHHHHHHHHhCCC-ceeeecCchHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIR 669 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~qG~~~~~~el~~~lael~G~~-~~~l~~~sGa~ge~a~llair 669 (1058)
..+|++.+.+..++..+ +.+..+.. ...+ ..+...++.+.|++++..+ ...++.++|++++++++..+|
T Consensus 60 ~~lGh~~p~i~~Ai~~q-~~~~~~~~~~~~~--------~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlKlar 130 (460)
T PRK06105 60 VALGFSEQRLVEAAARQ-MKKLPFYHTFSHK--------SHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVW 130 (460)
T ss_pred ccCCCCCHHHHHHHHHH-HHhCCCeeccccc--------CCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHH
Confidence 36788887776666665 23222211 1111 1123457889999998543 234668899999999999888
Q ss_pred HHHHHcCCCCCCEEEE-cCCCCCccHHHHHhCCc------------EEEEEcCCCC------CC-------CCHHHHHHH
Q 001531 670 AYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM------------KIVSVGTDAK------GN-------INIEELRKA 723 (1058)
Q Consensus 670 ~y~~~~G~~~r~~Vli-p~saHg~~pa~a~~~G~------------~vv~V~~d~~------g~-------iD~e~L~~~ 723 (1058)
.|...+|..+|.+||. ..++||....+....|. .+..++.... +. ..+++++++
T Consensus 131 ~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~ 210 (460)
T PRK06105 131 YYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEAL 210 (460)
T ss_pred HHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHH
Confidence 8876666445566664 67899976544322111 1233333110 00 124678888
Q ss_pred HHhc-CCCeEEEEEEcC-CCccccc---ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc--------CCcEEEeC
Q 001531 724 AEAN-RDNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLN 790 (1058)
Q Consensus 724 i~~~-~~~taaV~vt~P-n~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~--------GaDi~~~s 790 (1058)
+.+. .+++++|+++.- +..|++. ..++++.++|++||+++++|+++ .|+.+.|++ -+||+++
T Consensus 211 ~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~----tG~GRtG~~f~~~~~~v~PDi~~~- 285 (460)
T PRK06105 211 ILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVI----CGFGRTGNMFGCETFGIKPDILVM- 285 (460)
T ss_pred HHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccc----cCCCcCchhhhHHhcCCCCCeeee-
Confidence 8532 367888888753 4556664 13899999999999999999984 456565532 2688766
Q ss_pred CccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHH
Q 001531 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1058)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1058)
.|.+ ++|.-.+|.+++++++.+.+.... .........+++.|+++.++++.+.|..+-++++.+
T Consensus 286 -gK~l----ggG~~P~~av~~~~~i~~~~~~~~-----------~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~ 349 (460)
T PRK06105 286 -SKQL----SSSYQPLSAVLMNEKVYDPIADES-----------GKIGTFGHGFTASGHPVAAAVALENLAIIEERDLVG 349 (460)
T ss_pred -eccc----ccCcccceEEEEcHHHHHHHhccc-----------ccCcccccCCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 4766 344323566777776655432110 000000011124467777888888888887766544
Q ss_pred HHHHHHHHHHHHHHHHhcc--CCee--eccCCCccceEEEEecccccccCCC-----CHHHHHHHHHHCCccccCCCCCC
Q 001531 871 ASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTAGI-----EPEDVAKRLMDYGFHGPTMSWPV 941 (1058)
Q Consensus 871 ~a~~~~~~a~yL~~~L~~~--~~v~--~~g~~~~~~~e~vv~~~~~~~~~g~-----~~~~v~k~L~~~Gi~~~~~~~p~ 941 (1058)
+...+.++|.++|+++ ++++ +.|. | .+.-+-+....... ... .+..+.+.+.++|+.+.. .
T Consensus 350 ---~v~~~g~~l~~~L~~l~~~~~v~~vrG~-G-l~~gie~~~~~~~~-~~~~~~~~~a~~i~~~~~~~Gvl~~~----~ 419 (460)
T PRK06105 350 ---NAAERGARLQARLRALADHPLVGEVRGV-G-LIAAVELVADKATK-TPFEPPGKVGARANAAAHEHGVISRA----M 419 (460)
T ss_pred ---HHHHHHHHHHHHHHHhhcCCCeEEEEec-c-eEEEEEEecCcccC-CCCCchhHHHHHHHHHHHHCCeEEEe----c
Confidence 4446778888888764 3322 2231 3 22212121110000 010 135688888899998753 2
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001531 942 PGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1058)
Q Consensus 942 ~~~Lris~te~~t~eeid~fi~aL~~i~~e~~~ 974 (1058)
.+.++++|+...|++|||++++.|.+++.++..
T Consensus 420 g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 452 (460)
T PRK06105 420 GDTLAFCPPLIITAAQVDEMVDRFGRALDDVAA 452 (460)
T ss_pred CCEEEEECCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999988743
No 243
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.65 E-value=2.2e-14 Score=167.51 Aligned_cols=213 Identities=22% Similarity=0.213 Sum_probs=156.0
Q ss_pred HHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---
Q 001531 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1058)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~--- 289 (1058)
+.++++.+|+++|.+. +.++.+|++++.++++++ . ++||+||+++..|+.+...+...++..|+++++++.+
T Consensus 63 ~~~le~~la~l~g~~~--~v~~ssG~~Ai~~al~al-~--~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~ 137 (390)
T PRK08133 63 VTMFQERLAALEGAEA--CVATASGMAAILAVVMAL-L--QAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLD 137 (390)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-h--CCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHH
Confidence 4568899999999875 778899999888877776 2 3799999999999998887766566789999998774
Q ss_pred hhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCC
Q 001531 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1058)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1058)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|| +.++.+....|.++|+|++++|. |.++++ |
T Consensus 138 ~l~~~i~~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD-~t~~~~~~~~pl~~g~Divv~S~sK~~~g~---g 213 (390)
T PRK08133 138 AWRAAVRPNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVD-NCFCTPALQQPLKLGADVVIHSATKYLDGQ---G 213 (390)
T ss_pred HHHHhcCcCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCcEEEeecceeecCC---c
Confidence 4555 7889999999998 68999999999999999999999994 45566666667789999999998 877532 2
Q ss_pred CCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHH
Q 001531 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1058)
Q Consensus 367 GP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~i 446 (1058)
-.-+|++..++++++++- ..++..+. +.+.. .+ ++...|.+-+...
T Consensus 214 ~~~GG~vv~~~~~~~~~~-------------------------~~~~~~g~----~~~~~---~a--~~~l~gl~tl~~R 259 (390)
T PRK08133 214 RVLGGAVVGSKELMEEVF-------------------------GFLRTAGP----TLSPF---NA--WVFLKGLETLSLR 259 (390)
T ss_pred ceEeEEEEcCHHHHHHHH-------------------------HHHHHhCC----CCCHH---HH--HHHHcccchHHHH
Confidence 122367777766543320 00111110 11111 11 2234455567777
Q ss_pred HHHHHHHHHHHHHHHhcCCCeE
Q 001531 447 AQRVHGLAGTFALGLKKLGTVE 468 (1058)
Q Consensus 447 a~~~~~~a~~l~~~L~~~G~~~ 468 (1058)
.++..+++.++++.|++..+++
T Consensus 260 ~~~~~~~a~~la~~L~~~p~v~ 281 (390)
T PRK08133 260 MEAHSANALALAEWLEAHPGVE 281 (390)
T ss_pred HHHHHHHHHHHHHHHHhCCCee
Confidence 7788899999999999885464
No 244
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.65 E-value=6.8e-14 Score=166.62 Aligned_cols=340 Identities=16% Similarity=0.178 Sum_probs=208.2
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCC-------CceeeecCchHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGF-------DSFSLQPNAGAAGEYAG 664 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~-------~~~~l~~~sGa~ge~a~ 664 (1058)
..+|++.+++..++..+. ..-.+....-+. .+...++.+.|++++.- + ..++.++|+++++++
T Consensus 76 ~~lGh~~p~i~~Ai~~q~-~~l~~~~~~~~~--------~~~~~~lae~L~~~~p~~~~~~~~~-~v~f~~sGSEAvE~A 145 (472)
T PRK08742 76 NLFGHAEPRIGAAIAAQA-GELEQVMLAGFT--------HEPAVQLAEQLLAIAPRQDGRAPLS-KVFYADNGSAGVEVA 145 (472)
T ss_pred ccCCCCCHHHHHHHHHHH-HhCCCccccccC--------CHHHHHHHHHHHHhCCCcccCCCCC-EEEEeCCchHHHHHH
Confidence 357888777766665542 211111100011 12244788888888742 3 347788999999999
Q ss_pred HHHHHHHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCCc------------EEEEEcCCCC-----C-------CCCHHH
Q 001531 665 LMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAK-----G-------NINIEE 719 (1058)
Q Consensus 665 llair~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G~------------~vv~V~~d~~-----g-------~iD~e~ 719 (1058)
+.++|.|...+|..+|.+|| +..++||..-.+....|. .+..+|.... + ..+++.
T Consensus 146 lKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 225 (472)
T PRK08742 146 LKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADA 225 (472)
T ss_pred HHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHH
Confidence 99999987666655566666 567899987555433221 2334443211 1 114677
Q ss_pred HHHHHHhcCCCeEEEEEEc--CCCccccc---ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc--------CCcE
Q 001531 720 LRKAAEANRDNLSTLMVTY--PSTHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADV 786 (1058)
Q Consensus 720 L~~~i~~~~~~taaV~vt~--Pn~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~--------GaDi 786 (1058)
+++.++++.+++++|+++. .+..|++. ..++++.++|+++|+++|+|++ +.|+.+.|.+ -+||
T Consensus 226 l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV----~TGfGRtG~~~a~e~~gv~PDi 301 (472)
T PRK08742 226 LQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEI----ATGFGRTGTLFACEQAGVMPDL 301 (472)
T ss_pred HHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEech----hhCCCCCccchHHHhcCCCCCE
Confidence 8888876667899999886 24556654 2589999999999999999998 5677777643 3689
Q ss_pred EEeCCccccccCCCCCC-CceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHch
Q 001531 787 CHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1058)
Q Consensus 787 ~~~s~hKtf~~P~g~GG-Pg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1058)
+++ .|.++ +|- | +|.+++++++++.+.... .. ......+++.|+++.++++.+.|..+-+
T Consensus 302 v~~--gKgl~----gG~~P-laav~~~~ei~~~~~~~~-----------~~-~~~~h~~T~~gnpl~~Aaa~a~L~~i~~ 362 (472)
T PRK08742 302 LCL--SKGLT----GGFLP-LSAVLATQQLYDAFLDDS-----------RE-RAFLHSHSYTGNPLACAAALATLDIFAD 362 (472)
T ss_pred EEE--ccccc----CCCCC-cceeeccHHHHHHhhccC-----------cc-CccCcCCCCCccHHHHHHHHHHHHHHHH
Confidence 887 47663 332 5 667777777654331100 00 0001112244677888888888998888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc--CCee--eccCCCccceEEEEecccccccC-CCC---HHHHHHHHHHCCccccCC
Q 001531 866 KGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTA-GIE---PEDVAKRLMDYGFHGPTM 937 (1058)
Q Consensus 866 eGl~~~a~~~~~~a~yL~~~L~~~--~~v~--~~g~~~~~~~e~vv~~~~~~~~~-g~~---~~~v~k~L~~~Gi~~~~~ 937 (1058)
+++.+.++ ...++|.+.++.. ++++ +.|. | .+.-+.+....-.++. ..+ ...+.+++.++|+.+...
T Consensus 363 ~~l~~~~~---~~g~~l~~~~~~~~~~~~i~dvRG~-G-l~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~ 437 (472)
T PRK08742 363 DDVIARNQ---PTAARMTQLAAQIGEHPHVADVRQA-G-MVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPL 437 (472)
T ss_pred CCHHHHHH---HHHHHHHHHHHHHhcCCCeeeEecc-c-eEEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEec
Confidence 77655444 3344555444332 3322 2231 3 2222222111000000 001 246788889999987532
Q ss_pred CCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001531 938 SWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1058)
Q Consensus 938 ~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~ 973 (1058)
.++|||.|+...|++|||.++++|.++++++.
T Consensus 438 ----g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~~ 469 (472)
T PRK08742 438 ----GDVLYWMPPYCVDEAQLALLADTTRHAIDEAV 469 (472)
T ss_pred ----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 47999999999999999999999999988754
No 245
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.65 E-value=4e-14 Score=166.78 Aligned_cols=331 Identities=14% Similarity=0.186 Sum_probs=204.0
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCC-ceeeecCchHHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRA 670 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~-~~~l~~~sGa~ge~a~llair~ 670 (1058)
..+|++.+++..++..+ +....+.....+ ..+...++.+.|+++++.+ ...++.+||++++++++..+|.
T Consensus 55 ~~lGh~~p~i~~Ai~~q-~~~~~~~~~~~~--------~~~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~ 125 (428)
T PRK07986 55 AIHGYNHPQLNAAMKSQ-IDAMSHVMFGGI--------THPPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQ 125 (428)
T ss_pred hcCCCCCHHHHHHHHHH-HhhcCCcccccc--------CCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHH
Confidence 35788877766666555 222112111000 0123457788888887532 2347788999999999999998
Q ss_pred HHHHcCCCCCCEEE-EcCCCCCccHHHHHhCCc-------------EEEEEcCCCC------CCCCHHHHHHHHHhcCCC
Q 001531 671 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------------KIVSVGTDAK------GNINIEELRKAAEANRDN 730 (1058)
Q Consensus 671 y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G~-------------~vv~V~~d~~------g~iD~e~L~~~i~~~~~~ 730 (1058)
|+..+|. +|.+|| ...++||..-.+....|- .++.++.... ...|++++++++++++++
T Consensus 126 ~~~~~g~-~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~ 204 (428)
T PRK07986 126 YWQAKGE-PRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHE 204 (428)
T ss_pred HHHhcCC-CCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCc
Confidence 8765653 355555 567899966444322120 1233432111 124678899989766678
Q ss_pred eEEEEEEcC-C-Cccccc---ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc------C--CcEEEeCCcccccc
Q 001531 731 LSTLMVTYP-S-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNLHKTFCI 797 (1058)
Q Consensus 731 taaV~vt~P-n-~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~------G--aDi~~~s~hKtf~~ 797 (1058)
+++|+++.. . ..|++. ..+++|.++|+++|+++++|+++ .|+.+.|.+ | +||+++ .|.+
T Consensus 205 iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~----tG~GrtG~~fa~~~~gv~PDi~t~--gK~l-- 276 (428)
T PRK07986 205 IAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIA----TGFGRTGKLFACEHAGIAPDILCL--GKAL-- 276 (428)
T ss_pred EEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc----cCCccCCCeeeecccCCCCCEEEe--chhh--
Confidence 888888752 3 345532 24999999999999999999985 344455532 3 578764 5766
Q ss_pred CCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHH
Q 001531 798 PHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAIL 877 (1058)
Q Consensus 798 P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~ 877 (1058)
++|--.+|.+++++++.+.+.....+ .. ...+++.|+++.++++.+.|..+-++++. ++...
T Consensus 277 --~gG~~p~~av~~~~~i~~~~~~~~~~------------~~-~~~~T~~g~p~~~aaa~a~L~~i~~~~~~---~~~~~ 338 (428)
T PRK07986 277 --TGGTMTLSATLTTREVAETISNGEAG------------CF-MHGPTFMGNPLACAVANASLSLLESGDWQ---QQVAA 338 (428)
T ss_pred --hCCcccCcchhchHHHHHHhhcCCCC------------cc-ccCCCCCcCHHHHHHHHHHHHHHHhCCHH---HHHHH
Confidence 33322356666676666554211000 00 01112345677788888888888766654 34456
Q ss_pred HHHHHHHHHhcc--CCee--eccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCC
Q 001531 878 NANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESE 953 (1058)
Q Consensus 878 ~a~yL~~~L~~~--~~v~--~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~ 953 (1058)
+.++|.++|+++ ++.+ +.|. |. + ..+.+.. ......+.+.|.++|+.+... .+.++++|+...
T Consensus 339 ~g~~l~~~l~~l~~~~~i~~vRg~-Gl-~--~~ve~~~-----~~~~~~~~~~l~~~Gl~~~~~----g~~i~~~Ppl~i 405 (428)
T PRK07986 339 IEAQLREELAPLRDAPMVADVRVL-GA-I--GVVETTR-----PVNMAALQRFFVEQGVWIRPF----GKLIYLMPPYII 405 (428)
T ss_pred HHHHHHHHHHHHhcCCCEEeEecc-ce-E--EEEEeCC-----cccHHHHHHHHHHCCcEEEec----CCEEEEeCCCCC
Confidence 677888888764 2221 1221 21 2 2223221 124568999999999987532 468999999999
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 001531 954 SKEELDRYCDALISIREE 971 (1058)
Q Consensus 954 t~eeid~fi~aL~~i~~e 971 (1058)
|++|||+++++|.+++++
T Consensus 406 t~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 406 LPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred CHHHHHHHHHHHHHHHhh
Confidence 999999999999988643
No 246
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.65 E-value=4.6e-14 Score=165.65 Aligned_cols=323 Identities=16% Similarity=0.176 Sum_probs=200.3
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY 671 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y 671 (1058)
..+|++.+.+..++..+. ....+.. ..+. .+...++.++|+++++.....++.++|++++++++..+|.|
T Consensus 52 ~~lGh~~p~v~~ai~~q~-~~~~~~~-~~~~--------~~~~~~la~~L~~~~~~~~~v~f~~sGseA~e~AlklAr~~ 121 (408)
T PRK04612 52 CGLGHNDPDLVAALTEQA-GKLWHTS-NVFY--------SAPPLKLAEELVTASRFAEKVFLCNSGTEANEAAIKLVRKW 121 (408)
T ss_pred ccCCCCCHHHHHHHHHHH-Hhccccc-cccC--------CHHHHHHHHHHHhhCCCCCEEEEcCchHHHHHHHHHHHHHH
Confidence 357888777766665552 2111111 1111 12234778888888754334577889999999999999988
Q ss_pred HHHcCC-CCCCEEE-EcCCCCCccHHHHHhCCcE------------EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEE
Q 001531 672 HKARGD-HHRNVCI-IPVSAHGTNPATAAMCGMK------------IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVT 737 (1058)
Q Consensus 672 ~~~~G~-~~r~~Vl-ip~saHg~~pa~a~~~G~~------------vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt 737 (1058)
+..+|. .+|.+|+ ...++||..-.+....|-. ++.++. .|++++++.++ .+++++|+++
T Consensus 122 ~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~--~~~~aavi~e 194 (408)
T PRK04612 122 ASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDF-----NDVEALEAAMA--GGDVAAVMLE 194 (408)
T ss_pred HHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCC-----CCHHHHHHhhC--CCCEEEEEEC
Confidence 755552 2345555 4678999876654332211 122332 37899999885 2466666655
Q ss_pred cCC-Ccccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc--------CCcEEEeCCccccccCCCCCCCc
Q 001531 738 YPS-THGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPG 805 (1058)
Q Consensus 738 ~Pn-~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~--------GaDi~~~s~hKtf~~P~g~GGPg 805 (1058)
..+ +.|++.+ .+++|.++|+++|+++++|+++. |+.+.|.+ -+|++++ .|.++ ||..
T Consensus 195 P~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~t----g~gr~G~~~a~~~~~~~pdi~t~--~K~l~-----~G~p 263 (408)
T PRK04612 195 PIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQC----GMGRTGTLFAHWQEQVTPDIVTL--AKALG-----GGFP 263 (408)
T ss_pred CccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc----CCCcCCchhhhhhcCCCCCEEEE--cchhc-----CCCc
Confidence 323 3455542 49999999999999999999853 34444431 2466554 57773 4456
Q ss_pred eeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHH
Q 001531 806 MGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKR 885 (1058)
Q Consensus 806 ~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~ 885 (1058)
+|++.+++++.+.+.... -.+. +.|++..++++.+.|..+-++++. ++...+.++|.++
T Consensus 264 iga~~~~~~~~~~~~~~~--------------~~~t----~~~~p~~~aaa~a~L~~~~~~~l~---~~~~~~g~~l~~~ 322 (408)
T PRK04612 264 IGAMLAGPKVAETMQFGA--------------HGTT----FGGNPLAAAVARVALRKLASPQIA---ANVARQSAALRAG 322 (408)
T ss_pred eEEEEECHHHHhhhcCCC--------------cCCC----CCCCHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHH
Confidence 888888876655442110 0011 223555666677777777655543 4445667788888
Q ss_pred Hhcc---CCee--eccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHH
Q 001531 886 LEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDR 960 (1058)
Q Consensus 886 L~~~---~~v~--~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~ 960 (1058)
|+++ ++++ ..|. | .+..+.+... ....+.++.+.|.++|+.+.... .+.+|+.|+...|++|||+
T Consensus 323 l~~l~~~~~~i~~vrg~-G-l~~~i~~~~~-----~~~~a~~i~~~l~~~Gvlv~~~g---~~~lRl~Ppl~it~eeid~ 392 (408)
T PRK04612 323 LEALNAEFGVFAQVRGR-G-LMLGAVLAPA-----HAGQAGAILDLAAEHGLLLLQAG---PDVLRFVPALNLTDAELAD 392 (408)
T ss_pred HHHHHhhCCCeeeeecc-c-eEEEEEecCc-----hhhHHHHHHHHHHHCCeEEeeCC---CCEEEEcCCccCCHHHHHH
Confidence 8764 3332 2232 3 2222222100 01135688899999999874322 4789999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 001531 961 YCDALISIREEIA 973 (1058)
Q Consensus 961 fi~aL~~i~~e~~ 973 (1058)
+++++.+++.++.
T Consensus 393 ~l~~l~~~l~~~~ 405 (408)
T PRK04612 393 GLARLRLALADYV 405 (408)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999887654
No 247
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.65 E-value=6.5e-15 Score=170.17 Aligned_cols=297 Identities=9% Similarity=0.008 Sum_probs=185.1
Q ss_pred HHHHHHHHHHHHHHhCCCc---eeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcC-CCCCccH-HHHHhCCcEEE
Q 001531 631 QEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPV-SAHGTNP-ATAAMCGMKIV 705 (1058)
Q Consensus 631 ~~~~~el~~~lael~G~~~---~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~-saHg~~p-a~a~~~G~~vv 705 (1058)
.+++.++++.+++++|.+. +.+..++|+.+.+++++.+- . +++++++.. ..+|..- ..++..|.. +
T Consensus 47 ~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~----~----~g~~~l~i~~G~fg~r~~~~a~~~g~~-~ 117 (360)
T PRK05355 47 EAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLL----G----GGKKADYVDTGSWSKKAIKEAKKYGEV-N 117 (360)
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcC----C----CCCeEEEEECCHHHHHHHHHHHHhCCc-e
Confidence 4678899999999999732 34666777777766655432 1 234555432 2222111 236677865 6
Q ss_pred EEcCCC-CCCCCHHHHHH-HHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc
Q 001531 706 SVGTDA-KGNINIEELRK-AAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (1058)
Q Consensus 706 ~V~~d~-~g~iD~e~L~~-~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~ 782 (1058)
.+..++ .|..+..++++ +++ +++.+|.+++- +.+|+..++|++| +|++++||+++..+...+ ...+
T Consensus 118 ~~~~~~~~g~~~~~~~~~~~l~---~~~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~i-dv~~- 186 (360)
T PRK05355 118 VAASSEDDGFTYIPPLDEWQLS---DDAAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSRPI-DVSK- 186 (360)
T ss_pred EEecccccCCCCCCChhhccCC---CCCCEEEEccCCCcceEecCccccc------CCCcEEEEcCccccCccC-CHHH-
Confidence 666654 57766666666 665 56778888775 5689996457766 899999999875332211 1223
Q ss_pred CCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCC---CCCCCCCCCCCCCccchhhHHHHHHHHHH
Q 001531 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI---PAPEKSQPLGTIAAAPWGSALILPISYTY 859 (1058)
Q Consensus 783 GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~---g~~~~~~~t~~i~sa~~g~~~~~~~a~a~ 859 (1058)
.|+++++.||+|+ | ||+|++++++++.+.+... .+...++ ........|+++. .+.+..+.
T Consensus 187 -~d~~~~ssqK~lg-P-----~Glg~l~~s~~~l~~~~~~-~~~~~~~~~~~~~~~~~~Tp~~~--------~i~aL~~a 250 (360)
T PRK05355 187 -FGLIYAGAQKNIG-P-----AGLTIVIVREDLLGRALPS-IPSMLDYKTHADNDSMYNTPPTF--------AIYLAGLV 250 (360)
T ss_pred -ccEEEEecccccc-C-----CceEEEEECHHHHhhcccC-CChHHHHHHHHhcCCccCCCcHH--------HHHHHHHH
Confidence 4699999999874 3 6899999998776665432 1110111 0000001222221 12223444
Q ss_pred HHHHchh-hHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccC
Q 001531 860 IAMMGSK-GLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 936 (1058)
Q Consensus 860 l~~lG~e-Gl~~~a~~~~~~a~yL~~~L~~~--~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~ 936 (1058)
+..+-++ |+.++.++...+++++.++|++. +... ..+..+....+.|.++. +....++.+.+.++|++...
T Consensus 251 L~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~-~~~~~rs~~v~sf~~~~-----~~~~~~~~~~~~~~Gi~~~~ 324 (360)
T PRK05355 251 FKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNP-VAPEDRSRMNVPFTLAD-----EELDKKFLAEAKAAGLVGLK 324 (360)
T ss_pred HHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccC-CChhhcCCcEEEEEcCC-----hHHHHHHHHHHHHCCCcccC
Confidence 5666667 79999999999999999999985 2221 11111111123444431 23345676788889999743
Q ss_pred CCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001531 937 MSWPVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1058)
Q Consensus 937 ~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~ 970 (1058)
.. ...+++|+|+...+|++|||+|+++|++++.
T Consensus 325 ~~-~~~g~vRiS~~~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 325 GH-RSVGGMRASIYNAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred CC-CccCcEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 22 1248899999999999999999999999754
No 248
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.65 E-value=2.1e-14 Score=167.26 Aligned_cols=213 Identities=24% Similarity=0.258 Sum_probs=157.0
Q ss_pred HHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---
Q 001531 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1058)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~--- 289 (1058)
..++++.+|++.|.+. +.++.+|++++.++++++. ++||+||++...|+.+...+...++..|++++++|.+
T Consensus 56 ~~~le~~la~l~g~~~--~~~~~sG~~Ai~~al~al~---~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~d~~ 130 (380)
T TIGR01325 56 VAAFEERIAALEGAER--AVATATGMSAIQAALMTLL---QAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPTDLN 130 (380)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHHh---CCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCCCHH
Confidence 4567789999999865 6788999999998887762 3799999999999888877776677789999998864
Q ss_pred hhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCC
Q 001531 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1058)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1058)
++++ +++++++|++++| |.+|.+.|+++|.++||++|++++|| +.++.+....|.++|+||++.|. |.++++ |
T Consensus 131 ~l~~~i~~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD-~a~~~~~~~~pl~~g~Divv~S~sK~l~g~---g 206 (380)
T TIGR01325 131 AWEAAVKPNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVD-NVFATPVLQQPLKLGADVVVYSATKHIDGQ---G 206 (380)
T ss_pred HHHHhcCCCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCCEEEeeccceecCC---C
Confidence 4555 6788999999998 68999999999999999999999994 45555555566789999999998 877643 2
Q ss_pred CCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHH
Q 001531 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1058)
Q Consensus 367 GP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~i 446 (1058)
-.-+|++..++++.+.+- ..++..|.. .++. .+ ++...+.+-+...
T Consensus 207 ~~~gG~vv~~~~~~~~l~-------------------------~~~~~~g~~----~~p~---~a--~~~l~~l~tl~~r 252 (380)
T TIGR01325 207 RVMGGVIAGSEELMAEVA-------------------------VYLRHTGPA----MSPF---NA--WVLLKGLETLSLR 252 (380)
T ss_pred CeEEEEEEeCHHHHHHHH-------------------------HHHHhhCCC----CCHH---HH--HHHHhccCcHHHH
Confidence 123478877776655431 001111111 1111 11 2345566667777
Q ss_pred HHHHHHHHHHHHHHHhcCCCeE
Q 001531 447 AQRVHGLAGTFALGLKKLGTVE 468 (1058)
Q Consensus 447 a~~~~~~a~~l~~~L~~~G~~~ 468 (1058)
.++..+++.++++.|++.++++
T Consensus 253 ~~~~~~~a~~la~~L~~~p~v~ 274 (380)
T TIGR01325 253 MQKQFDSALAIAEWLQAQPQVQ 274 (380)
T ss_pred HHHHHHHHHHHHHHHHcCCCcc
Confidence 7888899999999999886554
No 249
>PRK08960 hypothetical protein; Provisional
Probab=99.65 E-value=4.2e-14 Score=165.33 Aligned_cols=298 Identities=12% Similarity=0.099 Sum_probs=177.7
Q ss_pred hhcHHHHHHHHHHHHHHHhCCC--ceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEE
Q 001531 627 AQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1058)
Q Consensus 627 ~qG~~~~~~el~~~lael~G~~--~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~v 704 (1058)
.+|..++...+.+++.+.+|.+ ...+..++|++. +..++++.+. .++++|++++..|..+...+...|.++
T Consensus 68 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~--al~~~~~~~~-----~~gd~vlv~~p~y~~~~~~~~~~g~~~ 140 (387)
T PRK08960 68 ARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSG--ALLLASSLLV-----DPGKHWLLADPGYPCNRHFLRLVEGAA 140 (387)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHH--HHHHHHHHhc-----CCCCEEEEcCCCCcchHHHHHhcCCeE
Confidence 3576665555666665555643 444555555442 2333344332 256889999998888888888899999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--ccHHHHHHHHHHcCCEEEEeccCccc-ccC-cC
Q 001531 705 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG-LT 777 (1058)
Q Consensus 705 v~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~a-l~g-l~ 777 (1058)
+.++++++ +.+|+++++++++ +++.++++++| |.+|..- +++++|+++|+++|+++++|+++..- ... ..
T Consensus 141 ~~v~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~ 217 (387)
T PRK08960 141 QLVPVGPDSRYQLTPALVERHWN---ADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAA 217 (387)
T ss_pred EEEecCcccCCCCCHHHHHHHhC---ccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC
Confidence 99998765 3699999999886 67888999999 5789875 25788899999999999999986321 111 00
Q ss_pred CCCccCCc-EEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHH
Q 001531 778 SPGYIGAD-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPIS 856 (1058)
Q Consensus 778 ~pg~~GaD-i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a 856 (1058)
.......+ +++.+++|.|+.| |.++|++.+++++.+.+... ......+.+...+.. +
T Consensus 218 ~~~~~~~~vi~~~S~SK~~g~~----GlRiG~~~~~~~~~~~~~~~--------------~~~~~~~~s~~~q~a----~ 275 (387)
T PRK08960 218 SVLEVDDDAFVLNSFSKYFGMT----GWRLGWLVAPPAAVPELEKL--------------AQNLYISASTPAQHA----A 275 (387)
T ss_pred ChhhccCCEEEEeecccccCCc----ccEEEEEEcCHHHHHHHHHH--------------HhhhccCCCHHHHHH----H
Confidence 11122234 4567788888543 67799999987665433100 000111211222221 1
Q ss_pred HHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHH-HCCccc
Q 001531 857 YTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHG 934 (1058)
Q Consensus 857 ~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~-~~Gi~~ 934 (1058)
.+.+.....+-+.+..+...++.+.+.+.|++. +.+.. .+.+.++ ++++++. .+.+..+++++|. ++||.+
T Consensus 276 ~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~-~p~g~~f--~~~~~~~----~~~~~~~~~~~ll~~~gi~v 348 (387)
T PRK08960 276 LACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAV-EPQGAFY--LYADISA----FGGDAFAFCRHFLETEHVAF 348 (387)
T ss_pred HHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCc-CCCeeEE--EEEeccc----cCCCHHHHHHHHHHhCCEEE
Confidence 222221112234444445556677888888774 32211 1223222 4566642 1246788988876 689986
Q ss_pred c-CCCCC---CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001531 935 P-TMSWP---VPGTLMIEPTESESKEELDRYCDALISI 968 (1058)
Q Consensus 935 ~-~~~~p---~~~~Lris~te~~t~eeid~fi~aL~~i 968 (1058)
. ...|. ..+.+||+++. +.+ ++.++++.+
T Consensus 349 ~pg~~f~~~~~~~~iRi~~~~--~~~---~l~~al~~l 381 (387)
T PRK08960 349 TPGLDFGRHQAGQHVRFAYTQ--SLP---RLQEAVERI 381 (387)
T ss_pred cCchHhCCCCCCCeEEEEecC--CHH---HHHHHHHHH
Confidence 4 22232 24689999984 344 444444443
No 250
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.65 E-value=1.8e-14 Score=165.14 Aligned_cols=289 Identities=17% Similarity=0.238 Sum_probs=192.2
Q ss_pred hhcHHHHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEE
Q 001531 627 AQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVS 706 (1058)
Q Consensus 627 ~qG~~~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~ 706 (1058)
.-|..+...++++.||+++|.+.+ +..++|-.++.+.+-++. ++++.|+...-.|.+--..++..+.+++.
T Consensus 79 i~G~~~~h~~LE~~lA~f~g~e~a-l~f~SGy~AN~~~i~~l~--------~~~dli~~D~lnHASiidG~rls~a~~~~ 149 (388)
T COG0156 79 ISGTSDLHVELEEELADFLGAEAA-LLFSSGFVANLGLLSALL--------KKGDLIFSDELNHASIIDGIRLSRAEVRR 149 (388)
T ss_pred ccCCcHHHHHHHHHHHHHhCCCcE-EEEcccchhHHHHHHHhc--------CCCcEEEEechhhhhHHHHHHhCCCcEEE
Confidence 346777888999999999999976 455678777866655543 24676666666676655557788999888
Q ss_pred EcCCCCCCCCHHHHHHHHHhcCCC---eEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCC--
Q 001531 707 VGTDAKGNINIEELRKAAEANRDN---LSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG-- 780 (1058)
Q Consensus 707 V~~d~~g~iD~e~L~~~i~~~~~~---taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg-- 780 (1058)
.+- .|+++|++.++++..+ -+.|++..- +..|.+- |+++|++++++||++++||++|..+..| .-|
T Consensus 150 f~H-----nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiA-pL~~l~~L~~ky~a~L~VDEAHa~Gv~G--~~GrG 221 (388)
T COG0156 150 FKH-----NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIA-PLPELVELAEKYGALLYVDEAHAVGVLG--PNGRG 221 (388)
T ss_pred ecC-----CCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcC-CHHHHHHHHHHhCcEEEEEccccccccC--CCCcc
Confidence 876 7999999999863212 334444333 5678887 7999999999999999999998654433 222
Q ss_pred ---ccC-----CcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCC-CccchhhHH
Q 001531 781 ---YIG-----ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTI-AAAPWGSAL 851 (1058)
Q Consensus 781 ---~~G-----aDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i-~sa~~g~~~ 851 (1058)
..| .||+++++.|.|+ -.+|++++++.+.+++-.+. + +-+ +++. .+.
T Consensus 222 ~~e~~g~~~~~vdi~~gTlsKAlG-------s~Gg~v~g~~~~~d~L~~~a-----------r----~~ifStal--pP~ 277 (388)
T COG0156 222 LAEHFGLEPEEVDIIVGTLGKALG-------SSGGYIAGSAALIDYLRNRA-----------R----PFIFSTAL--PPA 277 (388)
T ss_pred HHHHhCCCCccceEEEEEchhhhc-------ccCceeeCcHHHHHHHHHhC-----------C----ceeccCCC--CHH
Confidence 122 3799999999985 23478888877766552210 0 111 1111 123
Q ss_pred HHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHC
Q 001531 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (1058)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~ 930 (1058)
.++++...+..+-.. .+..++...++.++++.++.. +.+. +...+.. .+++.. ...+..++..|+++
T Consensus 278 ~aaa~~~al~~l~~~--~~~r~~L~~~~~~~~~~~~~~~~~~~--~s~s~I~-pv~~gd-------~~~a~~~s~~l~~~ 345 (388)
T COG0156 278 VAAAALAALRILEEG--PERRERLQELAAFFRSLLKALGLVLL--PSESPII-PVILGD-------EERALEASRALLEE 345 (388)
T ss_pred HHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHhcCCccC--CCCCCee-eeEeCC-------HHHHHHHHHHHHHC
Confidence 334445555555432 233445557777888666553 4331 1111221 122221 12467899999999
Q ss_pred CccccCCCCC-CC---CEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001531 931 GFHGPTMSWP-VP---GTLMIEPTESESKEELDRYCDALISI 968 (1058)
Q Consensus 931 Gi~~~~~~~p-~~---~~Lris~te~~t~eeid~fi~aL~~i 968 (1058)
||.+..+.+| |+ ..||+++|..+|++|||+++++|.++
T Consensus 346 Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 346 GIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred CeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 9999887777 43 57999999999999999999999865
No 251
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.64 E-value=4.3e-14 Score=164.60 Aligned_cols=277 Identities=16% Similarity=0.184 Sum_probs=179.8
Q ss_pred HhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 001531 205 IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1058)
Q Consensus 205 ~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~ 284 (1058)
..+|......++++.+++++|.+ ...++.+|+.++.+++.++ . ++||+|++++..|+++...++. .|.+++
T Consensus 78 ~~~g~~~~~~~l~~~la~~~~~~--~~i~~~~g~~~~~~~l~~~-~--~~gd~V~~~~~~~~~~~~~~~~----~g~~~~ 148 (385)
T PRK05958 78 LVTGNSPAHEALEEELAEWFGAE--RALLFSSGYAANLAVLTAL-A--GKGDLIVSDKLNHASLIDGARL----SRARVR 148 (385)
T ss_pred cccCCcHHHHHHHHHHHHHhCCC--cEEEECcHHHHHHHHHHHh-C--CCCCEEEEeCccCHHHHHHHHh----cCCceE
Confidence 34455556777889999999964 3566777776666554443 2 3799999999999999887642 466776
Q ss_pred EeC---chhhhc-cCC---CEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCC----------CCc
Q 001531 285 VSD---LKDIDY-KSG---DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP----------PGE 346 (1058)
Q Consensus 285 ~v~---~~~l~~-l~~---~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~----------p~~ 346 (1058)
.++ .+++++ +++ +++++++..+ |.+|.+.|+++|+++||++|+++++| +.++.+.+.. ...
T Consensus 149 ~~~~~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~D-e~~~~g~~~~~g~~~~~~~~~~~ 227 (385)
T PRK05958 149 RYPHNDVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVD-EAHGTGVLGPQGRGLAAEAGLAG 227 (385)
T ss_pred EeCCCCHHHHHHHHHhccCCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEE-CcccccccCCCCCchHHhhCCCC
Confidence 664 455665 533 3555555555 67899999999999999999999994 4455443321 111
Q ss_pred ccceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhH
Q 001531 347 LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA 425 (1058)
Q Consensus 347 ~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~ 425 (1058)
..-+|+++|. |.|+. ++ |++..++++.+.+-. ..+.+.. . +. +++..
T Consensus 228 ~~~~i~~~s~sK~~~~------~G-g~~~~~~~~~~~~~~----------~~~~~~~-----------~-~~---~~~~~ 275 (385)
T PRK05958 228 EPDVILVGTLGKALGS------SG-AAVLGSETLIDYLIN----------RARPFIF-----------T-TA---LPPAQ 275 (385)
T ss_pred CCceEEEEechhhccc------CC-cEEEcCHHHHHHHHH----------hCcccee-----------c-CC---CCHHH
Confidence 2234777776 88853 22 677777766554310 0000000 0 00 11112
Q ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC---HHHHHHHHHHcCceeeec
Q 001531 426 LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV 502 (1058)
Q Consensus 426 l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~---~~~l~~~L~~~GI~~~~~ 502 (1058)
..+..+++ .++.. . +++.+++.++.+++.+.|+++| +++..+ ...-+.+..++ +.++.+.|.++||.+...
T Consensus 276 ~aa~~aal--~~~~~-~-~~~~~~~~~~~~~l~~~L~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~ 349 (385)
T PRK05958 276 AAAARAAL--RILRR-E-PERRERLAALIARLRAGLRALG-FQLMDS-QSAIQPLIVGDNERALALAAALQEQGFWVGAI 349 (385)
T ss_pred HHHHHHHH--HHHhc-C-HHHHHHHHHHHHHHHHHHHHcC-CCcCCC-CCCEEEEEeCCHHHHHHHHHHHHHCCceEecc
Confidence 22222333 33322 2 5678889999999999999887 776532 11223444443 678999999999988642
Q ss_pred -------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 503 -------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 503 -------~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
..+.+|+|++.+++++|++++++.|..
T Consensus 350 ~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~ 383 (385)
T PRK05958 350 RPPTVPAGTSRLRITLTAAHTEADIDRLLEALAE 383 (385)
T ss_pred cCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHh
Confidence 125799999999999999999999853
No 252
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.64 E-value=9.5e-14 Score=164.76 Aligned_cols=335 Identities=17% Similarity=0.224 Sum_probs=201.8
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCC--ceeeecCchHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIR 669 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~--~~~l~~~sGa~ge~a~llair 669 (1058)
..+|++.+++..++..+. ....+... .+.+ .+...++.+.|++++.-. ...++.++|++++++++..+|
T Consensus 54 ~~lGH~~p~v~~Ai~~ql-~~~~~~~~-~~~~-------~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr 124 (445)
T PRK08593 54 QNVGHAPPRVVEAIKAQA-DKFIHYTP-AYMY-------HEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFAR 124 (445)
T ss_pred hcCCCCCHHHHHHHHHHH-HhccCccc-cccC-------CHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHH
Confidence 357888887776666652 22111110 0000 123457888999998533 234667899999988888888
Q ss_pred HHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCCc-------------EEEEEcCCCC-----CCCC-------HHHHHHH
Q 001531 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------------KIVSVGTDAK-----GNIN-------IEELRKA 723 (1058)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G~-------------~vv~V~~d~~-----g~iD-------~e~L~~~ 723 (1058)
.|. +|.+|| ...++||....+....+. .++.+|.... +..+ ++++++.
T Consensus 125 ~~t------gr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (445)
T PRK08593 125 AYT------GRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEM 198 (445)
T ss_pred Hhh------CCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHH
Confidence 762 244555 567899987655433221 2344554221 1111 2455555
Q ss_pred HHhc--CCCeEEEEEEcC-CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc------C--CcEEEe
Q 001531 724 AEAN--RDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHL 789 (1058)
Q Consensus 724 i~~~--~~~taaV~vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~------G--aDi~~~ 789 (1058)
++++ .+++++|+++.. +..|++.+ .+++|.++|++||+++++|+++ .|+.+.|.+ | +|++++
T Consensus 199 ~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~----tg~GrtG~~~a~~~~gv~pDi~t~ 274 (445)
T PRK08593 199 FEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQ----QGLGRTGKWSSISHFNITPDLMSF 274 (445)
T ss_pred HHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh----hCCCcCchHHHHHhcCCCCCEeee
Confidence 5432 367888888764 34566641 3999999999999999999985 344455432 3 687765
Q ss_pred CCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHH
Q 001531 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1058)
Q Consensus 790 s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1058)
.|.+ ++| -.+|++++++++++.+.... .+.+ +.++++.++++.+.+..+-++++
T Consensus 275 --gK~l----~~G-~p~gav~~~~~i~~~~~~~~-----------------~~~T-~~~~pl~~aaa~a~l~~l~~~~l- 328 (445)
T PRK08593 275 --GKSL----AGG-MPMSAIVGRKEIMESLEAPA-----------------HLFT-TGANPVSCAAALATIDMIEDESL- 328 (445)
T ss_pred --cccc----cCC-cccEEEEEcHHHHhhhccCC-----------------CCCC-CCCCHHHHHHHHHHHHHHHhccH-
Confidence 4766 333 44778888887766552110 0111 23455666777777877765544
Q ss_pred HHHHHHHHHHHHHHHHHhcc---CCee--eccCCCccceEEEEeccc-ccccCCCCHHHHHHHHHHCCccccCCCCCCCC
Q 001531 870 EASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRG-LKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPG 943 (1058)
Q Consensus 870 ~~a~~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~-~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~ 943 (1058)
.++...+.++|.++|+++ ++++ +.|. |.. ..+-+.... ..........++.++|.++|+.+.... .+
T Consensus 329 --~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~-Gl~-~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~---~~ 401 (445)
T PRK08593 329 --LQRSAEKGEYARKRFDQWVSKYNFVGDVRGY-GLS-IGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAVA---GN 401 (445)
T ss_pred --HHHHHHHHHHHHHHHHHHHhcCCcEEEEecc-ceE-EEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEeccC---CC
Confidence 344456677888888764 3332 2221 222 111111110 000000124578889999999875332 37
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 001531 944 TLMIEPTESESKEELDRYCDALISIREEIAQIENGKAD 981 (1058)
Q Consensus 944 ~Lris~te~~t~eeid~fi~aL~~i~~e~~~~~~~~~~ 981 (1058)
.+|+.|+..+|++|||++++++.+++.++.+ |.+|
T Consensus 402 ~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~---~~~~ 436 (445)
T PRK08593 402 VLRFQPPLVITYEQLDTALNTIEQAFTALEA---GKLD 436 (445)
T ss_pred EEEEECCCccCHHHHHHHHHHHHHHHHHHhc---cccC
Confidence 8999999999999999999999999877544 5553
No 253
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.64 E-value=2.8e-14 Score=167.07 Aligned_cols=212 Identities=20% Similarity=0.209 Sum_probs=152.6
Q ss_pred HHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---hh
Q 001531 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1058)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~---~~ 290 (1058)
.++++.+|+++|.+.+ .++.+|++++.+++++. + ++||+|+++...|+.+...++..++..|++++.++. ++
T Consensus 68 ~~Le~~lA~l~G~~~~--~~~~sG~~Ai~~~l~~~-l--~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~ 142 (398)
T PRK07504 68 DMFEKRMCALEGAEDA--RATASGMAAVTAAILCQ-V--KAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDGLDLDN 142 (398)
T ss_pred HHHHHHHHHHhCCCee--eEecCHHHHHHHHHHHH-h--CCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECCCCHHH
Confidence 4577899999999874 45778888877666554 2 389999999999999888877666778999998764 45
Q ss_pred hhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCCC
Q 001531 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1058)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~GG 367 (1058)
+++ ++++|++|++.+| |++|.+.|+++|.++||++|++++|| +.++.+....|.++|+|+++.|. |.|+++ |.
T Consensus 143 l~~ai~~~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD-~a~a~~~~~~~~~~gaDivv~S~sK~l~g~---g~ 218 (398)
T PRK07504 143 WEKAVRPNTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVD-NVFATPLFQKPLELGAHIVVYSATKHIDGQ---GR 218 (398)
T ss_pred HHHhcCcCceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEE-CCccccccCCchhhCCCEEEeeccccccCC---cc
Confidence 666 7889999999998 68999999999999999999999994 46666666677889999999998 888643 22
Q ss_pred CceEEEEEehhhhhc-CCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHH
Q 001531 368 PHAAFLATSQEYKRM-MPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1058)
Q Consensus 368 P~~G~l~~~~~~~~~-lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~i 446 (1058)
.-+|++..+++.+.+ +. ...+..|. . ... ..|+ +...+-+-+...
T Consensus 219 ~~GG~vv~~~~~i~~~~~-------------------------~~~~~~g~-~---~s~---~~A~--~~l~~L~tl~~R 264 (398)
T PRK07504 219 CLGGVVLSDKAWIEEHLQ-------------------------DYFRHTGP-S---LSP---FNAW--TLLKGLETLPVR 264 (398)
T ss_pred ceEEEEEeCcHHHHHHHH-------------------------HHHHHhCC-C---CCH---HHHH--HHHhccchHHHH
Confidence 234677766654321 10 00011110 0 011 1222 234455556667
Q ss_pred HHHHHHHHHHHHHHHhcCCCeE
Q 001531 447 AQRVHGLAGTFALGLKKLGTVE 468 (1058)
Q Consensus 447 a~~~~~~a~~l~~~L~~~G~~~ 468 (1058)
.++..+++.++++.|++.++++
T Consensus 265 ~~~~~~na~~la~~L~~~p~v~ 286 (398)
T PRK07504 265 VRQQTESAAAIADFLAGHPKVA 286 (398)
T ss_pred HHHHHHHHHHHHHHHHcCCCcc
Confidence 7777899999999999875454
No 254
>PLN02590 probable tyrosine decarboxylase
Probab=99.64 E-value=9.5e-14 Score=166.32 Aligned_cols=358 Identities=13% Similarity=0.077 Sum_probs=212.3
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcCCcc---cccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHH
Q 001531 139 MKFSKFDEGLTESQMIEHMQKLASMNKV---YKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLN 215 (1058)
Q Consensus 139 ~~lp~~~~~~sE~e~~~~~~~la~~n~~---~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e 215 (1058)
..+| ..+.+-.++++++.+....... ...|.|--.-+...++.+.+-+.+ .|-+ ..+.-+.+.+..+.-.+
T Consensus 101 ~~~P--~~g~~~~~il~~~~~~i~p~~~~~~hP~f~a~~~~~~~~~~~lgd~l~s--a~n~--~~~~~~~sPa~t~lE~~ 174 (539)
T PLN02590 101 DSAP--ERPESLKELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNA--GLSV--VGFTWLTSPAATELEII 174 (539)
T ss_pred CCCC--CCCCCHHHHHHHHHHHHhccCCcCCCCCeeEeccCCCcHHHHHHHHHHH--hccc--ccCCcccCchhHHHHHH
Confidence 3466 4677888999999876543321 122333311111233444332221 1111 11122234444455556
Q ss_pred HHHHHHHhcCCCC-------cceEeecchHHHHHHHHHHhccc--c--C----CCCEEEEcCCCCHHHHHHHHHhhcCCC
Q 001531 216 FQTMIADLTGLPM-------SNASLLDEGTAAAEAMAMCNNIQ--K--G----KKKTFIIASNCHPQTIDICITRADGFD 280 (1058)
Q Consensus 216 ~q~~ia~L~G~~~-------anasl~~~~Taa~ea~~~a~~~~--~--~----~gd~Vlv~~~~Hps~~~~~~~~a~~~g 280 (1058)
.-.++++|+|++. +...++.|||.++...+++.|.. + + ++-.|++++..|.|+.+.++.+ +.|
T Consensus 175 vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~il--Glg 252 (539)
T PLN02590 175 VLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIG--GIH 252 (539)
T ss_pred HHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHc--CCC
Confidence 6789999999986 34567788886554433332221 0 0 2236778999999999887643 222
Q ss_pred e-EEEEeCc----------hhhhc-cCC------CEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCC
Q 001531 281 I-KVVVSDL----------KDIDY-KSG------DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL 341 (1058)
Q Consensus 281 i-~v~~v~~----------~~l~~-l~~------~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l 341 (1058)
- .++.|+. ++|++ |.. ...+|+.+.. +.+|.++||++|+++|+++|++++|++- ++-..+
T Consensus 253 ~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA-~GG~al 331 (539)
T PLN02590 253 EENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAA-YAGNAC 331 (539)
T ss_pred cccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecc-hhhhhh
Confidence 1 2444433 34544 422 2456777776 5799999999999999999999999652 222122
Q ss_pred CCC-------CcccceEEEecC-cccccccCCCCCceEEEEEehh--hhhcC---CCcEEeeeecCCC-Cc---ceeeec
Q 001531 342 KPP-------GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQE--YKRMM---PGRIVGVSIDSSG-KP---ALRVAM 404 (1058)
Q Consensus 342 ~~p-------~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~--~~~~l---pgrivG~s~d~~g-~~---~~~l~l 404 (1058)
..| +--.||-+..+. |++..|+. .|++.+|++ +.+.+ |..+ ....+..+ .. .+.+.+
T Consensus 332 ~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~-----cg~llvr~~~~l~~a~~~~~~YL-~~~~~~~~~~~d~~d~~i~l 405 (539)
T PLN02590 332 ICPEYRKFIDGIENADSFNMNAHKWLFANQT-----CSPLWVKDRYSLIDALKTNPEYL-EFKVSKKDTVVNYKDWQISL 405 (539)
T ss_pred cChhhHHHhcCCccCCEEEECchhhcCcCcC-----EEEEEecCHHHHHHHhhcCHHHh-CCcccccccCCCccccCCCC
Confidence 222 113479999999 77777864 567888863 22222 1111 10000000 00 011111
Q ss_pred ccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC
Q 001531 405 QTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD 484 (1058)
Q Consensus 405 qtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~ 484 (1058)
-||.. ++..-+-+.++|.+|++++.+++.++|++|.+.|++.++|+++.++.+..|+|+...
T Consensus 406 ------sRr~r------------aLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVcFr~~~ 467 (539)
T PLN02590 406 ------SRRFR------------SLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAP 467 (539)
T ss_pred ------CCchH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEEEEecC
Confidence 23321 112122257899999999999999999999999999866999987778888886531
Q ss_pred -----------HHHHHHHHHHcCc-eeeec--c-CCeEEEEec-cCCCHHHHHHHHHHHhC
Q 001531 485 -----------AHAIASAAYKIEM-NLRVV--D-SNTVTASFD-ETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 485 -----------~~~l~~~L~~~GI-~~~~~--~-~~~lris~~-~~~t~edid~ll~al~~ 529 (1058)
..++.++|.+.|. ++... . .-.+|+|+. +.++++|++.+++.+..
T Consensus 468 ~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~ 528 (539)
T PLN02590 468 VDGDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQK 528 (539)
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 2456666666665 34322 2 246899984 57779999999998853
No 255
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.64 E-value=3.5e-14 Score=162.91 Aligned_cols=284 Identities=19% Similarity=0.227 Sum_probs=192.2
Q ss_pred HHHHHHHHHHHhC-CCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCC
Q 001531 634 FNNLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1058)
Q Consensus 634 ~~el~~~lael~G-~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~ 712 (1058)
..++++.+++.+| .+..++..+.|+... +-+.++.+. .++++|+++...++.+..+++..|.+++.|+.++
T Consensus 59 ~~~l~~a~a~~~~~~~~~~V~~gnGsde~--i~~l~~~~~-----~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~- 130 (356)
T COG0079 59 YRELRAALAEYYGVVDPENVLVGNGSDEL--IELLVRAFV-----EPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE- 130 (356)
T ss_pred HHHHHHHHHHHhCCCCcceEEEcCChHHH--HHHHHHHhh-----cCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc-
Confidence 3477889999999 666677777787633 334455553 2457899998888888888999999999999987
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHc--CCEEEEeccCcccccCcCCCC-----ccCC
Q 001531 713 GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQVGLTSPG-----YIGA 784 (1058)
Q Consensus 713 g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~--g~lv~vD~a~~~al~gl~~pg-----~~Ga 784 (1058)
+.+|++++.+++. +++..|++++|| .+|..- +.++|.+++... +++|++|+|+. -|..+. ...-
T Consensus 131 ~~~d~~~~~~~~~---~~~~lv~i~nPNNPTG~~~-~~~~l~~l~~~~~~~~~vVvDEAY~----eF~~~~~~~l~~~~~ 202 (356)
T COG0079 131 FRLDLDAILAAIR---DKTKLVFLCNPNNPTGTLL-PREELRALLEALPEGGLVVIDEAYI----EFSPESSLELLKYPP 202 (356)
T ss_pred cccCHHHHHHhhh---cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEeCchh----hcCCchhhhhccCCC
Confidence 9999999999997 689999999996 789886 355555555433 88999999853 222221 1122
Q ss_pred cEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHc
Q 001531 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1058)
Q Consensus 785 Di~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1058)
+++++ +||++-||..|-++|+...+++++..+-.- +..-++++ ....++.+.+..
T Consensus 203 nlivl---RTfSKa~gLAGlRlGy~ia~~~~i~~l~~v--------------r~p~~v~~------~a~~aa~aal~~-- 257 (356)
T COG0079 203 NLIVL---RTFSKAFGLAGLRVGYAIANPELIAALNKV--------------RPPFNVSS------PALAAAIAALRD-- 257 (356)
T ss_pred CEEEE---EecHHhhhcchhceeeccCCHHHHHHHHHh--------------cCCCCCCH------HHHHHHHHHccc--
Confidence 36666 666666777899999988887776654210 01112321 111111121111
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCC-C-C
Q 001531 865 SKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW-P-V 941 (1058)
Q Consensus 865 ~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~-p-~ 941 (1058)
.+-+++..+.....+.+|.+.|+++ +.-+++.. .|-+.++++. +. ..++.+.|.++||.+..... + .
T Consensus 258 ~~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~pS~----aNFvlv~~~~-----~~-~~~l~~~L~~~giivR~~~~~~~~ 327 (356)
T COG0079 258 ADYLEESVERIREERERLYAALKALGLFGVFPSQ----ANFVLVRVPD-----AE-AAALAEALLKKGILVRDCSSVGLL 327 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCC----CcEEEEECCC-----cc-HHHHHHHHHHCCEEEEeCCCCCCC
Confidence 1345666677778888999999875 22123321 2334566541 23 66899999999999875432 2 3
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 942 PGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 942 ~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
++++||++ -|++|.++|+++|++++..
T Consensus 328 ~~~lRitv---gt~een~~ll~AL~~~~~~ 354 (356)
T COG0079 328 PGYLRITV---GTPEENDRLLAALREVLKG 354 (356)
T ss_pred CCeEEEEe---CCHHHHHHHHHHHHHHHhc
Confidence 57999998 5788999999999987653
No 256
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.64 E-value=4e-14 Score=166.99 Aligned_cols=273 Identities=17% Similarity=0.185 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHH--HHHhhcCCCeEEEEeCc
Q 001531 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDI--CITRADGFDIKVVVSDL 288 (1058)
Q Consensus 211 ~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~--~~~~a~~~gi~v~~v~~ 288 (1058)
+.+.++++.+|+|+|.+. +.+++++++++..++.++ .+||+||+++.+|+++-.. +....+..|+++++++.
T Consensus 122 ~r~~~le~~lA~l~gae~--alvv~sg~aAi~l~l~~l----~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~ 195 (454)
T TIGR00474 122 SRYSHVEGLLCELTGAED--ALVVNNNAAAVLLALNTL----AKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGT 195 (454)
T ss_pred hHHHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHh----CCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCC
Confidence 446778899999999987 567889988876666443 2799999999998643111 01123457999999864
Q ss_pred ------hhhhc-cCCCEeEEEEEcC-CC--ce--eeccHHHHHHHHHhcCcEEEEEeccccccC--------------CC
Q 001531 289 ------KDIDY-KSGDVCGVLVQYP-GT--EG--EVLDYGDFIKNAHANGVKVVMATDLLALTI--------------LK 342 (1058)
Q Consensus 289 ------~~l~~-l~~~t~~V~v~~p-n~--~G--~i~dl~~I~~~a~~~galliV~a~~~slg~--------------l~ 342 (1058)
+++++ ++++|++|++.++ |+ .| .+.|+++|+++||++|++++||. +.|. +.
T Consensus 196 ~~~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~---~sG~l~~~~~~gl~~~p~~~ 272 (454)
T TIGR00474 196 TNRTHLKDYEDAITENTALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDL---GSGSLVDLSRYGLPDEPTVQ 272 (454)
T ss_pred CCCCCHHHHHHhcCcCCEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEEC---CCcccccchhccCCCCcccc
Confidence 45666 8889999988775 44 46 57899999999999999999953 2221 12
Q ss_pred CCCcccceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCcc
Q 001531 343 PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNIC 421 (1058)
Q Consensus 343 ~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~ 421 (1058)
.+.++|||++++|+ |+| |||++|++++++++++++...-++ | ..|-.|
T Consensus 273 ~~~~~GaDiv~fSg~K~L------gGp~~G~i~g~~~~i~~l~~~~l~-----------------r--~lr~~k------ 321 (454)
T TIGR00474 273 EVIAAGVDLVTFSGDKLL------GGPQAGIIVGKKELIERLKKNPLT-----------------R--ALRVDK------ 321 (454)
T ss_pred cHhHcCCCEEEecCcccc------CCCeEEEEEECHHHHHhhhhchhH-----------------H--HHhhCh------
Confidence 34579999999999 665 566789999999888776311100 0 001011
Q ss_pred chhHHHHHHHHH--HH----HHhCcccHHHHH---HHHHHHHHHHHHHHhcC--CCe--EEcC-C--------C--CccE
Q 001531 422 TAQALLANMAAM--YA----VYHGPEGLKTIA---QRVHGLAGTFALGLKKL--GTV--EVQG-L--------P--FFDT 477 (1058)
Q Consensus 422 t~~~l~a~~Aa~--yl----~~~g~~Gl~~ia---~~~~~~a~~l~~~L~~~--G~~--~l~~-~--------~--~~~~ 477 (1058)
-.+.++.+.+ |+ ++..-.|++.+. +++.++|..+++.|++. .++ ++.. . | ..++
T Consensus 322 --~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~ 399 (454)
T TIGR00474 322 --LTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPDERLPS 399 (454)
T ss_pred --HHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcCCCCCe
Confidence 1122222222 21 223333444333 34556788888888763 223 3331 1 1 2344
Q ss_pred EEEec--CC--HHHHHHHHHHcCc--eeeeccCCeEEEEeccCCCHHHHHHHHHHH
Q 001531 478 VKVKC--AD--AHAIASAAYKIEM--NLRVVDSNTVTASFDETTTLEDVDKLFIVF 527 (1058)
Q Consensus 478 v~i~~--~~--~~~l~~~L~~~GI--~~~~~~~~~lris~~~~~t~edid~ll~al 527 (1058)
+.+.+ .+ +.++.++|++... ..+ +..+.+.+-+-.- .++|++.+++.|
T Consensus 400 ~~v~~~~~~~~~~~l~~~lr~~~~~ii~r-~~~~~~~ld~r~~-~~~~~~~~~~~~ 453 (454)
T TIGR00474 400 YAVTLTPDGLSAEKLEARLRELPPPIIGR-IEDDRFLLDLRTL-LEDEEELLIEAL 453 (454)
T ss_pred EEEEEecCCCCHHHHHHHHhcCCCCEEEE-EECCEEEEEeCcC-CHHHHHHHHHHh
Confidence 44433 33 7899999987654 333 4566666665433 567788777765
No 257
>PRK12414 putative aminotransferase; Provisional
Probab=99.64 E-value=2.2e-14 Score=167.52 Aligned_cols=343 Identities=12% Similarity=0.128 Sum_probs=202.0
Q ss_pred HHHHHHHHhcCccCcCcccccccccccCCccccccccccccccc-ccCCCCchhhhhcHHHHHHHHHHHHHHHhCCCc--
Q 001531 573 LLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFA-NIHPFAPADQAQGYQEMFNNLGEWLCTITGFDS-- 649 (1058)
Q Consensus 573 ~~r~~~~l~~~~~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~-~~~P~~p~e~~qG~~~~~~el~~~lael~G~~~-- 649 (1058)
+.+.+.++... ..++.|+.+.+.+++............. ....|.| .+|..++...+++++++++|.+.
T Consensus 18 ~~~~~~~~~~~-----~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~lr~~ia~~l~~~~g~~~~~ 89 (384)
T PRK12414 18 IFTVIGQLAAQ-----HDALNLSQGAPNFAPDPALVEGVARAMRDGHNQYAP---MAGIAALREALAEKTERLYGARYDP 89 (384)
T ss_pred HHHHHHHHHHh-----CCeEEcCCCCCCCCCCHHHHHHHHHHHHhCCCCcCC---CCCcHHHHHHHHHHHHHHhCCCCCC
Confidence 44555444432 2357788777665433222211000000 1122433 46888888899999999999852
Q ss_pred -ee-eecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCC-CCCCCHHHHHHHHHh
Q 001531 650 -FS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KGNINIEELRKAAEA 726 (1058)
Q Consensus 650 -~~-l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~-~g~iD~e~L~~~i~~ 726 (1058)
.+ +.+++|++|.. ++++.+. .++++|+++...|..+...++..|.+++.++.++ ++.+|+++|+++++
T Consensus 90 ~~~i~it~g~~~al~---~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~- 160 (384)
T PRK12414 90 ASEVTVIASASEGLY---AAISALV-----HPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAIT- 160 (384)
T ss_pred CCcEEEECChHHHHH---HHHHHhc-----CCCCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcC-
Confidence 23 33444444432 3333331 2568899998877776667888999999999875 46799999999996
Q ss_pred cCCCeEEEEEEcC-CCccccc--ccHHHHHHHHHHcCCEEEEeccCcc-cccCc-CCC-Ccc----CCcEEEeCCccccc
Q 001531 727 NRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVGL-TSP-GYI----GADVCHLNLHKTFC 796 (1058)
Q Consensus 727 ~~~~taaV~vt~P-n~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~-al~gl-~~p-g~~----GaDi~~~s~hKtf~ 796 (1058)
+++++|++++| |.+|.+- +++++|+++|+++|+++++|+++.. .+.+- ..+ ..+ +--|++.+++|.|+
T Consensus 161 --~~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~ 238 (384)
T PRK12414 161 --PRTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYH 238 (384)
T ss_pred --cccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEeccccccc
Confidence 68899999999 4788873 3699999999999999999998642 11110 011 111 12277788889886
Q ss_pred cCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHH
Q 001531 797 IPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI 876 (1058)
Q Consensus 797 ~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~ 876 (1058)
.| |.++|++.+++++...+... +.....+.+...+.. +..++. -+ +.+.+..+...
T Consensus 239 ~p----GlRiG~~v~~~~l~~~l~~~--------------~~~~~~~~s~~~q~a----~~~~l~-~~-~~~~~~~~~~~ 294 (384)
T PRK12414 239 VT----GWRVGYCLAPAELMDEIRKV--------------HQFMVFSADTPMQHA----FAEALA-EP-ASYLGLGAFYQ 294 (384)
T ss_pred Cc----cceEEEEecCHHHHHHHHHH--------------HhheecCCCcHHHHH----HHHHhc-CC-hHHHHHHHHHH
Confidence 44 78899999887665443210 000111211112211 112221 11 22334444555
Q ss_pred HHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHH-HHHHHCCccccC-CCCC---C-CCEEEEEc
Q 001531 877 LNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA-KRLMDYGFHGPT-MSWP---V-PGTLMIEP 949 (1058)
Q Consensus 877 ~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~-k~L~~~Gi~~~~-~~~p---~-~~~Lris~ 949 (1058)
++++++.+.|++. +.+ + .+.+.++ +++++++.. +.+..+++ +.|.++||.+.. ..|. . .+.+||++
T Consensus 295 ~~r~~l~~~L~~~g~~~-~-~~~gg~~--~~~~~~~~~---~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~ 367 (384)
T PRK12414 295 RKRDLLARELAGSRFEL-L-PSEGSFF--MLARFRHFS---DESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSF 367 (384)
T ss_pred HHHHHHHHHHHhCCCee-c-CCCcceE--EEEcccccC---CCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEe
Confidence 7778888888875 332 2 2233332 344654211 12345566 556688997543 2232 1 46899999
Q ss_pred CCCCCHHHHHHHHHHHHH
Q 001531 950 TESESKEELDRYCDALIS 967 (1058)
Q Consensus 950 te~~t~eeid~fi~aL~~ 967 (1058)
.. ++++++..++.|.+
T Consensus 368 ~~--~~~~~~~~~~rl~~ 383 (384)
T PRK12414 368 SK--DDATLVEGARRLCS 383 (384)
T ss_pred cC--CHHHHHHHHHHHhh
Confidence 84 47777777766653
No 258
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.64 E-value=2.5e-14 Score=168.00 Aligned_cols=277 Identities=15% Similarity=0.123 Sum_probs=175.2
Q ss_pred HHHHH-HHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHH-hhcCCCeEEEEe--
Q 001531 211 ESLLN-FQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICIT-RADGFDIKVVVS-- 286 (1058)
Q Consensus 211 ~~l~e-~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~-~a~~~gi~v~~v-- 286 (1058)
+.+.+ .++.+++++|.+.+++ ++.+||.++.+++.++ . ++||+|+++...|+.+...+.. .++..|.+++.+
T Consensus 64 ~~l~~~~~~~~~~~~g~~~~~v-~~~sgt~a~~~~l~~l-~--~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 139 (402)
T cd00378 64 DEIEDLAIERAKKLFGAEYANV-QPHSGSQANLAVYFAL-L--EPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPY 139 (402)
T ss_pred HHHHHHHHHHHHHHhCCCceee-ecCCcHHHHHHHHHHh-c--CCCCEEEEecCccCccccccccccccccceeEEEecC
Confidence 34444 4567889999987544 3346788877777776 2 3899999999999876554221 123356554443
Q ss_pred ---------Cchhhhc-c-CCCEeEEEEEcCCCceeeccHHHHHHHHHhcCcEEEEEeccccccCC-----CCCCcccce
Q 001531 287 ---------DLKDIDY-K-SGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-----KPPGELGAD 350 (1058)
Q Consensus 287 ---------~~~~l~~-l-~~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l-----~~p~~~GaD 350 (1058)
|++++++ + .+++++|++.+|+ +|...|+++|+++||++|+++++| +.++.|.+ ..+.. ++|
T Consensus 140 ~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~-~~~~~~~~~I~~l~~~~~~~li~D-~a~~~g~~~~g~~~~~~~-~~d 216 (402)
T cd00378 140 GVDPETGLIDYDALEKMALEFKPKLIVAGASA-YPRPIDFKRFREIADEVGAYLLVD-MAHVAGLVAGGVFPNPLP-GAD 216 (402)
T ss_pred CcCcccCCcCHHHHHHHHHhCCCCEEEecCcc-cCCCcCHHHHHHHHHhcCCEEEEE-ccchhhhhhcccCCCccc-CCc
Confidence 2344555 5 4578888877764 477889999999999999999994 33333322 22233 789
Q ss_pred EEEecC-cccccccCCCCCceEEEEEeh-hhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHH
Q 001531 351 IVVGSA-QRFGVPMGYGGPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLA 428 (1058)
Q Consensus 351 ivvgs~-k~lg~P~~~GGP~~G~l~~~~-~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a 428 (1058)
++++|+ |+|+ ||..|++.+++ ++.+++.... .+ . ..++++. ....+
T Consensus 217 v~~~s~sK~l~------G~~gg~i~~~~~~~~~~l~~~~---------~~------------~--~~~~~~~---~~~~a 264 (402)
T cd00378 217 VVTTTTHKTLR------GPRGGLILTRKGELAKKINSAV---------FP------------G--LQGGPHL---HVIAA 264 (402)
T ss_pred EEEeccccCCC------CCCceEEEeccHHHHHHHHHHh---------Cc------------c--ccCCchH---HHHHH
Confidence 999998 7663 34456777665 6665541000 00 0 0011111 12222
Q ss_pred HHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcC-CCCccEEEEecC--C--HHHHHHHHHHcCceeeec-
Q 001531 429 NMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LPFFDTVKVKCA--D--AHAIASAAYKIEMNLRVV- 502 (1058)
Q Consensus 429 ~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~-~~~~~~v~i~~~--~--~~~l~~~L~~~GI~~~~~- 502 (1058)
+..++ ......+++++.+++.++++++++.|++.| ++++. +.....+.+.++ + ...+.+.|.++||.+...
T Consensus 265 ~~~al--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~ 341 (402)
T cd00378 265 KAVAL--KEALEPEFKAYAKQVVENAKALAEALKERG-FKVVSGGTDNHLVLVDLRPKGITGKAAEDALEEAGITVNKNT 341 (402)
T ss_pred HHHHH--HHHhhHHHHHHHHHHHHHHHHHHHHHHhCC-CeEeecCCCCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCc
Confidence 22222 222223567788889999999999999987 88763 211223445544 2 566777788889988531
Q ss_pred ---------cCCeEEEEeccCC----CHHHHHHHHHHHhC
Q 001531 503 ---------DSNTVTASFDETT----TLEDVDKLFIVFAG 529 (1058)
Q Consensus 503 ---------~~~~lris~~~~~----t~edid~ll~al~~ 529 (1058)
.+..+|++++..+ +.+|++.+++.|..
T Consensus 342 ~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~ 381 (402)
T cd00378 342 LPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIAR 381 (402)
T ss_pred CCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHH
Confidence 2357999998865 79999999999864
No 259
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.64 E-value=3.1e-14 Score=165.59 Aligned_cols=212 Identities=17% Similarity=0.155 Sum_probs=153.1
Q ss_pred HHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---
Q 001531 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1058)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~--- 289 (1058)
..++++.+|++.|.+. +.++.+|++++.+++..+ ++||+|++++..|+.+...+...++..|++++++|..
T Consensus 52 ~~~Le~~la~l~g~~~--al~~~SG~~Al~~~l~~l----~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~d~e 125 (380)
T PRK06176 52 RFALEELIADLEGGVK--GFAFASGLAGIHAVFSLF----QSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTSDLS 125 (380)
T ss_pred HHHHHHHHHHHhCCCC--EEEECCHHHHHHHHHHHc----CCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCCCHH
Confidence 3457789999999876 678899998887655332 3899999999999999888877777889999988764
Q ss_pred hhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCC
Q 001531 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1058)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1058)
++++ ++++|++|++++| |.+|.+.|+++|+++||++|++++|| +.++.+....|.++|+|++++|+ |.+++|-
T Consensus 126 ~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD-~t~a~~~~~~p~~~gaDivv~S~tK~l~g~~--- 201 (380)
T PRK06176 126 QIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVD-NTFATPYYQNPLLLGADIVVHSGTKYLGGHS--- 201 (380)
T ss_pred HHHHhcCcCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEE-CCccccccCCccccCCCEEEecCceeccCCc---
Confidence 4555 7889999999998 68999999999999999999999994 45666666667789999999998 8776542
Q ss_pred CCceEEEEEeh-hhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHH
Q 001531 367 GPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1058)
Q Consensus 367 GP~~G~l~~~~-~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ 445 (1058)
..-+|++.+++ ++.+++. ..|+.-|. .. .+. ..|+...|-+.+..
T Consensus 202 d~~gG~vv~~~~~~~~~~~-------------------------~~~~~~G~--~~--~~~-----~~~l~~~gl~tl~~ 247 (380)
T PRK06176 202 DVVAGLVTTNNEALAQEIA-------------------------FFQNAIGG--VL--GPQ-----DSWLLQRGIKTLGL 247 (380)
T ss_pred cceeeEEEecHHHHHHHHH-------------------------HHHHHhcC--CC--CHH-----HHHHHHhccCcHHH
Confidence 12257777654 3333220 00111010 00 000 12344455666677
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeE
Q 001531 446 IAQRVHGLAGTFALGLKKLGTVE 468 (1058)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~G~~~ 468 (1058)
..++..+++..+++.|++...+.
T Consensus 248 R~~~~~~~a~~la~~L~~~p~v~ 270 (380)
T PRK06176 248 RMEAHQKNALCVAEFLEKHPKVE 270 (380)
T ss_pred HHHHHHHHHHHHHHHHHhCCCee
Confidence 77888889999999999875453
No 260
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.64 E-value=3.4e-14 Score=165.56 Aligned_cols=305 Identities=17% Similarity=0.131 Sum_probs=187.7
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCC-
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 712 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~- 712 (1058)
..++++.+++++|.+.+ +..++|++|.. ++++.+ +.+++++||++...|..+...+...|++++.++++++
T Consensus 35 ~~~le~~la~~~g~~~~-v~~~sgt~al~---lal~al----~~~~Gd~Viv~~~~~~~~~~~~~~~G~~~v~vd~~~~~ 106 (379)
T PRK11658 35 NQALEQAFCQLTGNQHA-IAVSSATAGMH---ITLMAL----GIGPGDEVITPSLTWVSTLNMIVLLGATPVMVDVDRDT 106 (379)
T ss_pred HHHHHHHHHHHhCCCeE-EEECCHHHHHH---HHHHHc----CCCCCCEEEECCCcHHHHHHHHHHcCCEEEEEecCCCc
Confidence 45788999999999864 45566765543 333332 1235789999988776666667789999999999876
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCcccccCc-CCCCccCCcEEEeCC
Q 001531 713 GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIGADVCHLNL 791 (1058)
Q Consensus 713 g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl-~~pg~~GaDi~~~s~ 791 (1058)
+.+|+++++++++ ++|++|+.++| +|... |+++|+++|+++|+++++|+++..+..-. ...|.+|.|+..++.
T Consensus 107 ~~~d~~~l~~~i~---~~tkav~~~~~--~G~~~-d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~g~~~~Sf~~ 180 (379)
T PRK11658 107 LMVTPEAIEAAIT---PRTKAIIPVHY--AGAPA-DLDAIRAIGERYGIPVIEDAAHAVGTYYKGRHIGARGTAIFSFHA 180 (379)
T ss_pred CCcCHHHHHHhcc---cCCeEEEEeCC--CCCcC-CHHHHHHHHHHcCCeEEEECCCccCCeECCeecCCCCCEEEeCCC
Confidence 4799999999997 78999887765 68887 89999999999999999999986432211 124677877766666
Q ss_pred ccccccCCCCCCCceeEEEEe-CCCCCCCCC-CCcccCCCC------CCC-CCCC-CCC-CCCccchhhHHHHHHHHHHH
Q 001531 792 HKTFCIPHGGGGPGMGPIGVK-KHLAPFLPS-HPVVSTGGI------PAP-EKSQ-PLG-TIAAAPWGSALILPISYTYI 860 (1058)
Q Consensus 792 hKtf~~P~g~GGPg~G~i~~~-~~l~~~lpg-~~vg~~~d~------g~~-~~~~-~t~-~i~sa~~g~~~~~~~a~a~l 860 (1058)
+|.+. + +.+|+++++ +++...+.. +..|...+. +.. .... ..+ |... +.+.++.
T Consensus 181 ~K~l~-----~-g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~----~~l~AAl----- 245 (379)
T PRK11658 181 IKNIT-----C-AEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNL----ADINAAI----- 245 (379)
T ss_pred CCcCc-----c-cCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCc----CHHHHHH-----
Confidence 67663 2 335667765 344332210 001111000 000 0000 001 1110 1122222
Q ss_pred HHHchhhHHHHHHHHHHHHHHHHHHHhcc-CC-eeeccCC-CccceEEEEecccccccCCCCHHHHHHHHHHCCccccCC
Q 001531 861 AMMGSKGLTEASKIAILNANYMAKRLEKH-YP-ILFRGVN-GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 937 (1058)
Q Consensus 861 ~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~-v~~~g~~-~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~ 937 (1058)
.....+++.+..++..++++++.+.|+++ +. +..+... ....+.+++.++. ...+.+.+++.+.|.++||.....
T Consensus 246 ~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~r~~~~~~L~~~gI~~~~~ 323 (379)
T PRK11658 246 ALVQLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDE--ERCGISRDALMEALKERGIGTGLH 323 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECC--ccccCCHHHHHHHHHHCCCCCccc
Confidence 22223567777777778888888999874 21 1111110 1123445554431 011457889999999999875421
Q ss_pred C-----------------CCC-----CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001531 938 S-----------------WPV-----PGTLMIEPTESESKEELDRYCDALISIR 969 (1058)
Q Consensus 938 ~-----------------~p~-----~~~Lris~te~~t~eeid~fi~aL~~i~ 969 (1058)
+ +|. ...+.+-.....|++|++++++++++++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 324 FRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQIA 377 (379)
T ss_pred CcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 1 221 2446665566788999999999998864
No 261
>PRK06917 hypothetical protein; Provisional
Probab=99.64 E-value=1.4e-13 Score=163.43 Aligned_cols=344 Identities=16% Similarity=0.144 Sum_probs=211.4
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCC-ceeeecCchHHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRA 670 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~-~~~l~~~sGa~ge~a~llair~ 670 (1058)
..+|+|.+.+..++..+. ....+.....+. .+...++.+.|++++... ...++.++|++++++++..+|.
T Consensus 43 ~~lGh~hp~v~~Ai~~ql-~~~~~~~~~~~~--------~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~ 113 (447)
T PRK06917 43 AGIGHGVKEIADAIKEQA-EEVSFVYRSQFT--------SEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANETAMKIAIQ 113 (447)
T ss_pred ccCCCCCHHHHHHHHHHH-hhCcCccccccC--------CHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHH
Confidence 358888888877777663 322222110111 123457888999988543 2347788999999999998888
Q ss_pred HHHHcCCCCCCEEEE-cCCCCCccHHHHHhCCc------------EEEEEcCCCC-----C-------CCCHHHHHHHHH
Q 001531 671 YHKARGDHHRNVCII-PVSAHGTNPATAAMCGM------------KIVSVGTDAK-----G-------NINIEELRKAAE 725 (1058)
Q Consensus 671 y~~~~G~~~r~~Vli-p~saHg~~pa~a~~~G~------------~vv~V~~d~~-----g-------~iD~e~L~~~i~ 725 (1058)
|...+|..+|++|+. ..++||....+....|. .+..++.... + .-|++.+++.++
T Consensus 114 ~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~ 193 (447)
T PRK06917 114 HFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIE 193 (447)
T ss_pred HHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHH
Confidence 876677556677764 56899988766543321 1222321110 0 013567888887
Q ss_pred hcC-CCeEEEEEEcC-C-Cccccc---ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc--------CCcEEEeCC
Q 001531 726 ANR-DNLSTLMVTYP-S-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNL 791 (1058)
Q Consensus 726 ~~~-~~taaV~vt~P-n-~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~--------GaDi~~~s~ 791 (1058)
+++ +++++|+++.- . .-|++. ..+++|.++|+++|+++++|+++ .|+.+.|.+ -+|++++
T Consensus 194 ~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~----tGfGRtG~~~a~~~~gv~PDi~~~-- 267 (447)
T PRK06917 194 RIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVM----TGLGRTGAMFAMEHWGVEPDIMTL-- 267 (447)
T ss_pred hcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechh----hCcCcccchhhHHhcCCCCCEEEe--
Confidence 654 47888888853 2 234543 25899999999999999999984 456566643 2688776
Q ss_pred ccccccCCCCCC-CceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHH
Q 001531 792 HKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1058)
Q Consensus 792 hKtf~~P~g~GG-Pg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1058)
.|.++ +|- | +|.+++++++++.+.... + . ....+++.|+++.++++.+.|..+..+++.+
T Consensus 268 gK~l~----~G~~P-i~a~~~~~~i~~~~~~~~-----------~--~-~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~ 328 (447)
T PRK06917 268 GKGLG----AGYTP-IAATVVSDRVMEPILRGS-----------R--S-IMSGHTLSANPLSAATALAVLEYMEKHNLPE 328 (447)
T ss_pred eehhc----cCCcc-eEEEEEcHHHHHHHhccC-----------c--c-cccccCCCCCHHHHHHHHHHHHHHHHCCHHH
Confidence 47663 332 5 666777776655432100 0 0 0011124467777888888888887666543
Q ss_pred HHHHHHHHHHHHHHHHhcc---CCee--eccCCCccceEEEEecccccccCC----CCHHHHHHHHHHCCccccCCCC--
Q 001531 871 ASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAG----IEPEDVAKRLMDYGFHGPTMSW-- 939 (1058)
Q Consensus 871 ~a~~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~~~~~~g----~~~~~v~k~L~~~Gi~~~~~~~-- 939 (1058)
+...+.++|.+.|+++ ++++ +.|. |. +.-+-+..++...+.. .....+.+.|.++|+.+.....
T Consensus 329 ---~~~~~g~~l~~~L~~l~~~~~~i~~vrG~-Gl-~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~ 403 (447)
T PRK06917 329 ---KAAEKGEYLIKGLQKVQQQSTIIGDVRGK-GL-LIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQ 403 (447)
T ss_pred ---HHHHHHHHHHHHHHHHHhcCCCEEEEeec-ce-EEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEeccccc
Confidence 4446677888888764 3332 2232 32 2111121110000000 0145688888999998742210
Q ss_pred --CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001531 940 --PVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1058)
Q Consensus 940 --p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~~ 974 (1058)
+..+.++++|+..+|++|||+++++|.++++++.+
T Consensus 404 ~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 440 (447)
T PRK06917 404 DGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEMMQ 440 (447)
T ss_pred CCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 11468999999999999999999999999987633
No 262
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.64 E-value=5.4e-14 Score=164.12 Aligned_cols=296 Identities=15% Similarity=0.151 Sum_probs=181.3
Q ss_pred hhcHHHHHHHHHHHHHHHhCCC--ce-eeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcE
Q 001531 627 AQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1058)
Q Consensus 627 ~qG~~~~~~el~~~lael~G~~--~~-~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~ 703 (1058)
.+|..++...+.+++.+..|.+ .. .+..++|++. ++.++++.+. .+++.|++++..++.+...+...|.+
T Consensus 66 ~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~--~l~~~~~~~~-----~~gd~vlv~~P~y~~~~~~~~~~G~~ 138 (383)
T TIGR03540 66 YEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKE--GIAHIPLAFV-----NPGDIVLVPDPGYPVYRIGTLFAGGE 138 (383)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHH--HHHHHHHHhC-----CCCCEEEEeCCCCcchHHHHHhcCCE
Confidence 3576666667777777666764 33 3555455442 2233333331 35688999998777776778899999
Q ss_pred EEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--ccHHHHHHHHHHcCCEEEEeccCcc-cccCcC
Q 001531 704 IVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVGLT 777 (1058)
Q Consensus 704 vv~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~-al~gl~ 777 (1058)
++.+|.+++ ..+|++++++++. +++++|++++| |.+|..- +.+++|+++|+++|+++++|+++.. ...+..
T Consensus 139 v~~v~~~~~~g~~~d~~~l~~~~~---~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~ 215 (383)
T TIGR03540 139 PYEMPLKEENGFLPDFDAIPEDIA---KKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYK 215 (383)
T ss_pred EEEEecCcccCCccCHHHHHhhcc---ccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCC
Confidence 999999754 3579999999886 68899999998 5789886 2489999999999999999998741 111111
Q ss_pred CC--Cc----cCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHH
Q 001531 778 SP--GY----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1058)
Q Consensus 778 ~p--g~----~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~ 851 (1058)
.+ .. ....|+..++.|+|+.| |.++|++.+++++...+... +.......+. .
T Consensus 216 ~~~~~~~~~~~~~~i~~~SfSK~~g~~----GlRiG~~i~~~~l~~~~~~~------------~~~~~~~~~~------~ 273 (383)
T TIGR03540 216 APSFLEVDGAKDVGIEFHSLSKTYNMT----GWRIGMAVGNADLIAGLGKV------------KTNVDSGVFQ------A 273 (383)
T ss_pred CcCcccCCCcccCEEEEEecccccCCc----cceeeEEeCCHHHHHHHHHH------------HHhcccCCCh------H
Confidence 11 11 12236667788887533 67799999887665543210 0000011111 1
Q ss_pred HHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHH-HC
Q 001531 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DY 930 (1058)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~-~~ 930 (1058)
...++..++. .+.+-+++..+...++++++.+.|++. .+.+..+++.++ ++++++ .+.+..++.++|. ++
T Consensus 274 ~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~--~~~~l~-----~~~~~~~~~~~ll~~~ 344 (383)
T TIGR03540 274 IQYAAIAALN-GPQDVVKEIRKIYQRRRDLLLEALKKI-GIDVEKPKATFY--VWVPVP-----EGYTSAEFAARLLEET 344 (383)
T ss_pred HHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEecCCCcceE--EEEECC-----CCCCHHHHHHHHHHHC
Confidence 1111222222 233445555556667888899999875 332222223221 456654 2467789999875 68
Q ss_pred CccccC-CCCCC--CCEEEEEcCCCCCHHHHHHHHHHH
Q 001531 931 GFHGPT-MSWPV--PGTLMIEPTESESKEELDRYCDAL 965 (1058)
Q Consensus 931 Gi~~~~-~~~p~--~~~Lris~te~~t~eeid~fi~aL 965 (1058)
||.+.. ..|+. .+++||++. .+++++++.++.|
T Consensus 345 gi~v~~g~~f~~~~~~~~Ris~~--~~~~~l~~~l~~l 380 (383)
T TIGR03540 345 GVVVTPGVGFGEYGEGYIRISLT--VPDERLEEAVARI 380 (383)
T ss_pred CEEEecchhhCccCCCeEEEEec--CCHHHHHHHHHHH
Confidence 997643 33442 468999996 3455555544444
No 263
>PRK04311 selenocysteine synthase; Provisional
Probab=99.64 E-value=5.1e-14 Score=166.56 Aligned_cols=277 Identities=18% Similarity=0.171 Sum_probs=174.0
Q ss_pred HHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHH--HHHhhcCCCeEEEEeCc
Q 001531 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDI--CITRADGFDIKVVVSDL 288 (1058)
Q Consensus 211 ~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~--~~~~a~~~gi~v~~v~~ 288 (1058)
+.+..+++.+|+|+|.+. +.+++++++++..++.++ .+|++||+++.+|.++-.. +....+..|+++++++.
T Consensus 127 ~r~~~~e~~lA~l~Gae~--a~vv~sgtaAl~l~l~~l----~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~ 200 (464)
T PRK04311 127 SRDRALAALLCALTGAED--ALVVNNNAAAVLLALNAL----AAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGT 200 (464)
T ss_pred hHHHHHHHHHHHHhCCCe--EEEECCHHHHHHHHHHHh----CCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECC
Confidence 445678899999999985 778899998776655443 2799999999887643110 11123457999988874
Q ss_pred ------hhhhc-cCCCEeEEEEEcC-CC--ce--eeccHHHHHHHHHhcCcEEEEEeccc------cccCC-----CCCC
Q 001531 289 ------KDIDY-KSGDVCGVLVQYP-GT--EG--EVLDYGDFIKNAHANGVKVVMATDLL------ALTIL-----KPPG 345 (1058)
Q Consensus 289 ------~~l~~-l~~~t~~V~v~~p-n~--~G--~i~dl~~I~~~a~~~galliV~a~~~------slg~l-----~~p~ 345 (1058)
+++++ ++++|++|++.++ |+ +| .+.|+++|+++||++|++++||+-.- .+|+. ..+.
T Consensus 201 ~~~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l 280 (464)
T PRK04311 201 TNRTHLRDYEQAINENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELL 280 (464)
T ss_pred CCCCCHHHHHHhcCccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHH
Confidence 35666 8889999998876 54 44 56799999999999999999954110 11111 1234
Q ss_pred cccceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchh
Q 001531 346 ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQ 424 (1058)
Q Consensus 346 ~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~ 424 (1058)
++|+|++++|+ |.| |||++|++++++++++++...-++ +.+ |-.| .
T Consensus 281 ~~GaDiv~fSg~K~L------gGp~~G~i~g~~~li~~l~~~~~~--------r~l-----------r~dk--------~ 327 (464)
T PRK04311 281 AAGVDLVTFSGDKLL------GGPQAGIIVGKKELIARLKKHPLK--------RAL-----------RVDK--------L 327 (464)
T ss_pred hcCCcEEEecCcccc------cCCceEEEEEcHHHHHHHhhchhH--------HHH-----------hcch--------H
Confidence 58999999999 655 567789999999988876321111 000 1111 1
Q ss_pred HHHHHHHHH--HH----HHhCcccHH---HHHHHHHHHHHHHHHHHhcCC--Ce--EEcCC---------C--CccEEEE
Q 001531 425 ALLANMAAM--YA----VYHGPEGLK---TIAQRVHGLAGTFALGLKKLG--TV--EVQGL---------P--FFDTVKV 480 (1058)
Q Consensus 425 ~l~a~~Aa~--yl----~~~g~~Gl~---~ia~~~~~~a~~l~~~L~~~G--~~--~l~~~---------~--~~~~v~i 480 (1058)
.+.++.+.+ |+ ++.+-.+++ ...+++.++|..+++.|++.. ++ ++... | ..+++.+
T Consensus 328 ~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v 407 (464)
T PRK04311 328 TLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAV 407 (464)
T ss_pred HHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEE
Confidence 222333333 21 122222322 223555677888888887652 23 33311 1 2344444
Q ss_pred ec--CC--HHHHHHHHHHcC--ceeeeccCCeEEEEeccCCCHHHHHHHHHHHh
Q 001531 481 KC--AD--AHAIASAAYKIE--MNLRVVDSNTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 481 ~~--~~--~~~l~~~L~~~G--I~~~~~~~~~lris~~~~~t~edid~ll~al~ 528 (1058)
.+ .+ +.++.++|++.. |..+ +..+.+.+-+-.- .++|++.+++.|.
T Consensus 408 ~~~~~~~~~~~l~~~lr~~~~~i~~r-~~~~~~~ld~r~~-~~~~~~~~~~~~~ 459 (464)
T PRK04311 408 TLTPKDRSLEALAARLRLLPPPVIGR-IEDGRLLLDLRTL-EEEDEERLAAALL 459 (464)
T ss_pred EEeCCCCCHHHHHHHHhcCCCCEEEE-EECCEEEEEeCcC-CHHHHHHHHHHHH
Confidence 33 33 789999998754 4443 4566666665543 5678888887775
No 264
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.63 E-value=9.2e-14 Score=164.81 Aligned_cols=330 Identities=16% Similarity=0.160 Sum_probs=197.4
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhC-CCceeeecCchHHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMVIRA 670 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G-~~~~~l~~~sGa~ge~a~llair~ 670 (1058)
..||++.+.+..++..+. ....+.....+. .+...++.+.|+++++ .....++.++|++++++++.++|.
T Consensus 55 ~~lGh~~p~v~~a~~~q~-~~~~~~~~~~~~--------~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~AlklAr~ 125 (433)
T PRK08117 55 ANVGHRHPKVVQAIKEQA-DKLMHGPSGVIY--------YESILKLAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKH 125 (433)
T ss_pred ccCCCCCHHHHHHHHHHH-HhccCccccccC--------CHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHH
Confidence 467888877776666652 211111100010 1234578899999983 223346678999999888888887
Q ss_pred HHHHcCCCCCCEEE-EcCCCCCccHHHHHhCC--------c-----EEEEEcCCCCCC------------CCHHHHHHHH
Q 001531 671 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCG--------M-----KIVSVGTDAKGN------------INIEELRKAA 724 (1058)
Q Consensus 671 y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G--------~-----~vv~V~~d~~g~------------iD~e~L~~~i 724 (1058)
|. +|++|+ +..++||....+....+ + .+..+|.....+ .|++++++.+
T Consensus 126 ~t------gr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 199 (433)
T PRK08117 126 VT------KRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLF 199 (433)
T ss_pred hc------CCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHH
Confidence 62 234454 56789998766532211 1 133444422111 2677788887
Q ss_pred Hh--cCCCeEEEEEEcC-CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCc------cC--CcEEEeC
Q 001531 725 EA--NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY------IG--ADVCHLN 790 (1058)
Q Consensus 725 ~~--~~~~taaV~vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~------~G--aDi~~~s 790 (1058)
++ ..+++++|+++.- +..|.+.+ .+++|.++|++||+++++|+++. |+.+.|. +| +|+++
T Consensus 200 ~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t----G~gr~G~~~~~~~~gv~pDi~t-- 273 (433)
T PRK08117 200 KHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQT----GFGRTGEWFAAQTFGVVPDIMT-- 273 (433)
T ss_pred HhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh----ccCccccchhHhhcCCCCCEee--
Confidence 64 2457888877653 45577651 29999999999999999999964 3444442 23 46644
Q ss_pred CccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHH
Q 001531 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1058)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1058)
+.|.++ ||-.+|.+++++++...+.... ..+ ++.++++.++++.+.+..+..+++.+
T Consensus 274 ~sK~lg-----~G~pigav~~~~~i~~~~~~~~--------------~~~----T~~~np~~~aaa~a~L~~l~~~~l~~ 330 (433)
T PRK08117 274 IAKGIA-----SGLPLSAVVASKELMEQWPLGS--------------HGT----TFGGNPVACAAALATLEVIKEEKLLD 330 (433)
T ss_pred hhhhcc-----CCCcceeEEEcHHHHhhccCCC--------------CCC----CCCcCHHHHHHHHHHHHHHHhccHHH
Confidence 357763 3344778888877665442110 001 12245556666777777775555443
Q ss_pred HHHHHHHHHHHHHHHHhcc---CCee--eccCCCccceEEEEecccccc-cCCCCHHHHHHHHHHCCccccCCCCCCCCE
Q 001531 871 ASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKN-TAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 944 (1058)
Q Consensus 871 ~a~~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~~~~-~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~ 944 (1058)
+...+.++++++|+++ +.+. +.|. + .+. -+.+..-.. ........+.+.|.++|+.+.... +..+.
T Consensus 331 ---~~~~~g~~l~~~L~~l~~~~~~~~~vrg~-G-l~~--gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~~~~ 402 (433)
T PRK08117 331 ---NANEMGAYALERLEVLKEKHPVIGDVRGI-G-LMI--GIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCG-NAGNV 402 (433)
T ss_pred ---HHHHHHHHHHHHHHHHHhcCCceeeeecC-C-cEE--EEEEecCCCCcchHHHHHHHHHHHHCCCEEeecC-CCCCE
Confidence 3445577888888764 3322 1221 2 221 122211000 001124578888999998764322 12478
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001531 945 LMIEPTESESKEELDRYCDALISIREEIA 973 (1058)
Q Consensus 945 Lris~te~~t~eeid~fi~aL~~i~~e~~ 973 (1058)
+|++|+..+|++|||+++++|.+++.++.
T Consensus 403 lRl~p~~~~t~~~i~~~~~~l~~~l~~~~ 431 (433)
T PRK08117 403 LRMIPPLTVTKEEIDEGLDILDEALTEYE 431 (433)
T ss_pred EEEeCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999887653
No 265
>PLN02880 tyrosine decarboxylase
Probab=99.63 E-value=5.8e-14 Score=167.91 Aligned_cols=357 Identities=13% Similarity=0.069 Sum_probs=209.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhcCCcc-c--ccccCCCCCCCCChHHHHHHHH---hCCCcccccCCChhHHhhHHHHHH
Q 001531 140 KFSKFDEGLTESQMIEHMQKLASMNKV-Y--KSFIGMGYYNTHVPPVILRNIM---ENPAWYTQYTPYQAEIAQGRLESL 213 (1058)
Q Consensus 140 ~lp~~~~~~sE~e~~~~~~~la~~n~~-~--~~~lG~g~~~~~~p~~i~~~i~---~~~~~~t~ytpyq~e~sqG~l~~l 213 (1058)
.+| +.+.+-.++++++.+.-..+.. + ..|.|--.-+...++.+.+-+. .+..+. | +.+.+..+.-
T Consensus 54 ~~p--~~~~~~~~~l~~~~~~i~~~~~~~~hP~f~~~~~~~~~~~~~lad~l~~~~n~~~~~-----~--~~sp~~~~lE 124 (490)
T PLN02880 54 SAP--NQPETLDQVLDDVQAKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSAGLNIVGFS-----W--ITSPAATELE 124 (490)
T ss_pred cCC--CCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeccCCCcHHHHHHHHHHHhhccCCcc-----c--ccCcccHHHH
Confidence 455 4667888999999875433321 1 2344332222223444432222 222211 1 1233344455
Q ss_pred HHHHHHHHHhcCCCCc-------ceEeecchHHHHH-HHHHHhccc-c-----C-CCCEEEEcCCCCHHHHHHHHHhhcC
Q 001531 214 LNFQTMIADLTGLPMS-------NASLLDEGTAAAE-AMAMCNNIQ-K-----G-KKKTFIIASNCHPQTIDICITRADG 278 (1058)
Q Consensus 214 ~e~q~~ia~L~G~~~a-------nasl~~~~Taa~e-a~~~a~~~~-~-----~-~gd~Vlv~~~~Hps~~~~~~~~a~~ 278 (1058)
.+.-+++++|+|++.. ...+++|||.++. |+..|+... + + ++-.|++++..|.|+.+.++.+ +
T Consensus 125 ~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~l--G 202 (490)
T PLN02880 125 MIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIA--G 202 (490)
T ss_pred HHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHc--C
Confidence 5666899999999864 3556777776654 344444211 0 0 2236778999999999987643 2
Q ss_pred CCe-EEEEeCc----------hhhhc-cCC------CEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEecccccc
Q 001531 279 FDI-KVVVSDL----------KDIDY-KSG------DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALT 339 (1058)
Q Consensus 279 ~gi-~v~~v~~----------~~l~~-l~~------~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg 339 (1058)
.|- .++.|+. ++|++ |.. ...+|+.+.. +.+|.++|+++|+++|+++|++++|++ .++.+
T Consensus 203 lg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDa-A~gg~ 281 (490)
T PLN02880 203 IHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDA-AYAGS 281 (490)
T ss_pred CCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEeh-hhHHH
Confidence 331 1333332 34544 422 2466777776 579999999999999999999999954 23333
Q ss_pred CCCC-------CCcccceEEEecC-cccccccCCCCCceEEEEEehh--hhhcC---CCcEEeeeecCCCCcce-eeecc
Q 001531 340 ILKP-------PGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQE--YKRMM---PGRIVGVSIDSSGKPAL-RVAMQ 405 (1058)
Q Consensus 340 ~l~~-------p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~--~~~~l---pgrivG~s~d~~g~~~~-~l~lq 405 (1058)
.+.. .+-.+||.++.+. |+++.|.+ .|++++++. +.+.+ ++.+.....+..+...+ .+.+
T Consensus 282 ~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~-----~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i- 355 (490)
T PLN02880 282 ACICPEYRHYIDGVEEADSFNMNAHKWFLTNFD-----CSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQI- 355 (490)
T ss_pred HHhCHHHHHHhcCchhcCEEEECchhhcCCCcc-----EEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCc-
Confidence 2322 2224799999999 77777753 678999852 22222 11110000000000000 0011
Q ss_pred cccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC-
Q 001531 406 TREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD- 484 (1058)
Q Consensus 406 treq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~- 484 (1058)
+--||. . ++..-+-+..+|.+|++++.++..++++++.+.|++..+++++.++.++.+.|+.+.
T Consensus 356 ---~~~rr~---------~---alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~Fr~~~~ 420 (490)
T PLN02880 356 ---PLGRRF---------R---SLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRLVPP 420 (490)
T ss_pred ---CCCCcc---------c---HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEEeCC
Confidence 112232 1 111111146899999999999999999999999988755999977767777776531
Q ss_pred ----------HHHHHHHHHHcC-ceeeec--c-CCeEEEEeccCCC-HHHHHHHHHHHhC
Q 001531 485 ----------AHAIASAAYKIE-MNLRVV--D-SNTVTASFDETTT-LEDVDKLFIVFAG 529 (1058)
Q Consensus 485 ----------~~~l~~~L~~~G-I~~~~~--~-~~~lris~~~~~t-~edid~ll~al~~ 529 (1058)
..++.++|.+.| +++... . ...+|+|++-.+| ++|++.+++.+..
T Consensus 421 ~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~ 480 (490)
T PLN02880 421 KNNEDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQD 480 (490)
T ss_pred CCChhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 134556666554 445332 2 3579999987666 5999999999864
No 266
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.63 E-value=2.1e-14 Score=169.40 Aligned_cols=143 Identities=24% Similarity=0.247 Sum_probs=119.3
Q ss_pred HHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---h
Q 001531 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---D 290 (1058)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~---~ 290 (1058)
..+++.+|++.|.+. +.++.+|++++.++++++ + ++||+|+++...|+.+...+...++..|++++.+|.. +
T Consensus 67 ~~Le~~lA~leg~~~--al~~~sG~~Ai~~al~~l-l--~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~d~e~ 141 (431)
T PRK08248 67 DVFEKRIAALEGGIG--ALAVSSGQAAITYSILNI-A--SAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPSDPEN 141 (431)
T ss_pred HHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-h--CCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCCCHHH
Confidence 346789999999765 788999999999888776 3 3799999999999988888877677899999998864 4
Q ss_pred hhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccc
Q 001531 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVP 362 (1058)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P 362 (1058)
+++ +++++++|++++| |++|.+.|+++|+++||++|++++|| +.++.+....|.++|+|+++.|+ |.+++|
T Consensus 142 l~~ai~~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD-~t~a~~~~~~pl~~gaDivv~S~tK~lgg~ 215 (431)
T PRK08248 142 FEAAITDKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVD-NTFASPYLLRPIEHGADIVVHSATKFIGGH 215 (431)
T ss_pred HHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEe-CCCCccccCChhHcCCCEEEEcCccccCCC
Confidence 555 7788999999887 78999999999999999999999994 45565666667789999999998 766543
No 267
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.63 E-value=4.5e-14 Score=164.67 Aligned_cols=304 Identities=15% Similarity=0.116 Sum_probs=185.0
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCC-C
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-K 712 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~-~ 712 (1058)
..++++.+++++|.+.. +..++|++|.. ++++.+ +.+++++|++|...|......+...|++++.+++++ +
T Consensus 31 ~~~le~~la~~~g~~~~-v~~~sgt~al~---~~l~al----~~~~Gd~Viv~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 102 (380)
T TIGR03588 31 VPAFEEALAEYVGAKYA-VAFNSATSALH---IACLAL----GVGPGDRVWTTPITFVATANCALYCGAKVDFVDIDPDT 102 (380)
T ss_pred HHHHHHHHHHHHCCCeE-EEEcCHHHHHH---HHHHHc----CCCCCCEEEeCCcchHHHHHHHHHcCCEEEEEecCCCc
Confidence 34788899999998764 44456665543 333332 123578999998766555555778999999999975 5
Q ss_pred CCCCHHHHHHHHHhcC-CCeEEEEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCC----cEE
Q 001531 713 GNINIEELRKAAEANR-DNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA----DVC 787 (1058)
Q Consensus 713 g~iD~e~L~~~i~~~~-~~taaV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~Ga----Di~ 787 (1058)
+.+|+++|++++++++ ++|++|+++++ +|... |+++|+++|+++|+++++|+++..+.. + ....+|. |+.
T Consensus 103 ~~~d~~~l~~~i~~~~~~~t~~v~~~~~--~G~~~-~~~~i~~l~~~~~~~lI~D~a~a~g~~-~-~~~~~g~~~~~d~~ 177 (380)
T TIGR03588 103 GNIDEDALEKKLAAAKGKLPKAIVPVDF--AGKSV-DMQAIAALAKKHGLKIIEDASHALGAE-Y-GGKPVGNCRYADAT 177 (380)
T ss_pred CCcCHHHHHHHhhcccCCCceEEEEeCC--CCccC-CHHHHHHHHHHcCCEEEEECCCcccCc-c-CCEeCCCccccceE
Confidence 7899999999996321 47888888765 68776 799999999999999999999864322 1 1122344 999
Q ss_pred EeCCc--cccccCCCCCCCceeEEEEe-CCCCCCCCC-CCcccCCCC---C-----CCCCCCCC-C-CCCccchhhHHHH
Q 001531 788 HLNLH--KTFCIPHGGGGPGMGPIGVK-KHLAPFLPS-HPVVSTGGI---P-----APEKSQPL-G-TIAAAPWGSALIL 853 (1058)
Q Consensus 788 ~~s~h--Ktf~~P~g~GGPg~G~i~~~-~~l~~~lpg-~~vg~~~d~---g-----~~~~~~~t-~-~i~sa~~g~~~~~ 853 (1058)
++|+| |+++. +.+|++.++ +++.+.+.. +..|...+. . .+..+... + +... +.+.+
T Consensus 178 ~~S~~~~K~~~~------~~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m----~~l~a 247 (380)
T TIGR03588 178 VFSFHPVKIITT------AEGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRM----TDIQA 247 (380)
T ss_pred EEecCCCCcccc------cCceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCc----cHHHH
Confidence 99998 77742 234566665 333332210 000100000 0 00000000 0 1110 11111
Q ss_pred HHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCee-eccCC--CccceEEEEecccccccCCCCHHHHHHHHHHC
Q 001531 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPIL-FRGVN--GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (1058)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~-~~g~~--~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~ 930 (1058)
+...+.+ +.+.+..++..++++++.+.|+++..+. +..+. ....+.+++.+.. ..+.+.+++.+.|.++
T Consensus 248 a~g~~qL-----~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~r~~l~~~L~~~ 319 (380)
T TIGR03588 248 ALGLSQL-----KKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQ---EFGCTRKEVFEALRAA 319 (380)
T ss_pred HHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECC---cCCCCHHHHHHHHHHC
Confidence 1122222 2355666777788999999998752221 11111 1122344444431 1246789999999999
Q ss_pred CccccCCCCCC----------------------CCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001531 931 GFHGPTMSWPV----------------------PGTLMIEPTESESKEELDRYCDALISI 968 (1058)
Q Consensus 931 Gi~~~~~~~p~----------------------~~~Lris~te~~t~eeid~fi~aL~~i 968 (1058)
||.++....|+ ...+.+......|++|+++++++|+++
T Consensus 320 gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~ 379 (380)
T TIGR03588 320 GIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKV 379 (380)
T ss_pred CCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHh
Confidence 99764221111 156788778888999999999999876
No 268
>PRK08912 hypothetical protein; Provisional
Probab=99.63 E-value=4.8e-14 Score=164.82 Aligned_cols=302 Identities=16% Similarity=0.148 Sum_probs=184.8
Q ss_pred hhcHHHHHHHHHHHHHHHhCCC--ce-eeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcE
Q 001531 627 AQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1058)
Q Consensus 627 ~qG~~~~~~el~~~lael~G~~--~~-~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~ 703 (1058)
.+|..++...+.+++.+..|.+ .. ++..++|++. +..++++.+. .++++|+++...|+.+...++..|.+
T Consensus 62 ~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~--al~~~~~~~~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~ 134 (387)
T PRK08912 62 MMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATE--ALAAALLALV-----EPGDEVVLFQPLYDAYLPLIRRAGGV 134 (387)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHH--HHHHHHHHhc-----CCCCEEEEeCCCchhhHHHHHHcCCE
Confidence 3576666666666666666653 33 4444445432 2223333321 24678999998887777778899999
Q ss_pred EEEEcCCC-CCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--ccHHHHHHHHHHcCCEEEEeccCccc-ccC--c
Q 001531 704 IVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG--L 776 (1058)
Q Consensus 704 vv~V~~d~-~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~a-l~g--l 776 (1058)
++.+++++ ++.+|+++|+++++ +++++|++++| |.+|.+- +++++|+++|+++|+++++|+++... ..+ .
T Consensus 135 ~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~ 211 (387)
T PRK08912 135 PRLVRLEPPHWRLPRAALAAAFS---PRTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRH 211 (387)
T ss_pred EEEEecCcccCcCCHHHHHHHhC---ccceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCC
Confidence 99999875 47899999999986 68889999999 4788875 25888999999999999999986311 111 0
Q ss_pred ----CCCCccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHH
Q 001531 777 ----TSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1058)
Q Consensus 777 ----~~pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~ 852 (1058)
..++..+-+++..+++|.|+.| |.++|++++++++...+-.. . .....+.+...+..
T Consensus 212 ~~~~~~~~~~~~~i~~~S~SK~~g~~----GlRiG~~~~~~~~~~~l~~~------------~--~~~~~~~~~~~q~~- 272 (387)
T PRK08912 212 IPLMTLPGMRERTVKIGSAGKIFSLT----GWKVGFVCAAPPLLRVLAKA------------H--QFLTFTTPPNLQAA- 272 (387)
T ss_pred cChhhCCCccCceEEEeechhhccCc----CceeEEEecCHHHHHHHHHH------------H--hhccccCChHHHHH-
Confidence 0111123568889999988644 67899999987655433100 0 00001111111111
Q ss_pred HHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHH-HC
Q 001531 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DY 930 (1058)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~-~~ 930 (1058)
+..++. -..+-+++..+...++.+++.+.|++. +++. .+++.++ ++++++... ...+..+++++|. ++
T Consensus 273 ---~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~g~~~--l~~~l~~~~--~~~~~~~~~~~l~~~~ 342 (387)
T PRK08912 273 ---VAYGLG-KPDDYFEGMRADLARSRDRLAAGLRRIGFPVL--PSQGTYF--LTVDLAPLG--LAEDDVAFCRRLVEEA 342 (387)
T ss_pred ---HHHHHh-CCHHHHHHHHHHHHHHHHHHHHHHHhCCCccc--CCCcceE--EEecccccC--CCCCHHHHHHHHHhcC
Confidence 111121 112223445555667788898999875 3322 2233222 345654211 1246778999976 57
Q ss_pred Ccccc-CCCC----CCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001531 931 GFHGP-TMSW----PVPGTLMIEPTESESKEELDRYCDALISIR 969 (1058)
Q Consensus 931 Gi~~~-~~~~----p~~~~Lris~te~~t~eeid~fi~aL~~i~ 969 (1058)
||.+. ...| +..+.+||++.. ..++++..++.|.+.+
T Consensus 343 gV~v~pg~~f~~~~~~~~~iRl~~~~--~~~~l~~~l~rl~~~l 384 (387)
T PRK08912 343 GVAAIPVSAFYEEDPVTSVVRFCFAK--RDATLDEAVERLAAAR 384 (387)
T ss_pred CEEEecchhhCCCCCCCCEEEEEEeC--CHHHHHHHHHHHHHHH
Confidence 99753 2223 235789999985 3667777776666543
No 269
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.63 E-value=1.5e-13 Score=162.97 Aligned_cols=333 Identities=20% Similarity=0.197 Sum_probs=204.1
Q ss_pred cccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCC-ceeeecCchHHHHHHHHHHHH
Q 001531 591 MIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIR 669 (1058)
Q Consensus 591 ~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~-~~~l~~~sGa~ge~a~llair 669 (1058)
...+|++.+.+..++..+. ....+.. .++. ..+...++.+.|+++++.. ...++.++|++++++++..+|
T Consensus 52 ~~~lGh~~p~v~~Ai~~ql-~~~~~~~-~~~~-------~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklAr 122 (443)
T PRK08360 52 VQNVGHNNPRVVKAIKEQT-DKLIHYT-PIYG-------FPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFAR 122 (443)
T ss_pred hcccCCCCHHHHHHHHHHH-HhccCcc-cccc-------CcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHHH
Confidence 3468888887776666653 2211111 0110 0123457888899998654 235778899999988888888
Q ss_pred HHHHHcCCCCCCEEEE-cCCCCCccHHHHHhCCc------------EEEEEcCCCCCC------------CCHHHHHHHH
Q 001531 670 AYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM------------KIVSVGTDAKGN------------INIEELRKAA 724 (1058)
Q Consensus 670 ~y~~~~G~~~r~~Vli-p~saHg~~pa~a~~~G~------------~vv~V~~d~~g~------------iD~e~L~~~i 724 (1058)
.|. +|.+|+. ..++||.........|. .+..+|.....+ .+++.+++++
T Consensus 123 ~~t------gr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 196 (443)
T PRK08360 123 AYT------KRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKF 196 (443)
T ss_pred Hhc------CCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHH
Confidence 762 3455654 56899987554333221 234444422110 2355677777
Q ss_pred Hh--cCCCeEEEEEEcC-CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCc--------cCCcEEEeC
Q 001531 725 EA--NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY--------IGADVCHLN 790 (1058)
Q Consensus 725 ~~--~~~~taaV~vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~--------~GaDi~~~s 790 (1058)
++ +++++++|+++.- +..|++.+ .+++|.++|++||+++++|+++. ++.+.|. .-.|++++
T Consensus 197 ~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~----g~gr~G~~~a~~~~~~~pDiitl- 271 (443)
T PRK08360 197 EGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQS----GLGRTGKWFAIEHFGVEPDIITL- 271 (443)
T ss_pred HhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc----CCCcCccchhhhhcCCCCCEEEe-
Confidence 54 2478999988732 45677642 49999999999999999999864 3333332 23577765
Q ss_pred CccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHH
Q 001531 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1058)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1058)
.|.++ +|..+|++++++++++.+.... .... ..+++..++++.+.+..+..+++.
T Consensus 272 -sK~l~-----~G~pigav~~~~~i~~~~~~~~--------------~~~T----~~~~p~~~aaa~a~l~~l~~~~l~- 326 (443)
T PRK08360 272 -GKPLG-----GGLPISATIGRAEIMDSLPPLA--------------HAFT----LSGNPVASAAALAVIEEIEEKNLL- 326 (443)
T ss_pred -ccccc-----CCceeEEEEEcHHHHhhhcCCC--------------CCCC----CCcCHHHHHHHHHHHHHHHHcCHH-
Confidence 57764 3456888998877766552110 0011 223455566677777777665544
Q ss_pred HHHHHHHHHHHHHHHHhcc---CCee--eccCCCccceEEEEecccc--cccC-CCCHHHHHHHHHHCCccccCCCCCCC
Q 001531 871 ASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGL--KNTA-GIEPEDVAKRLMDYGFHGPTMSWPVP 942 (1058)
Q Consensus 871 ~a~~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~~--~~~~-g~~~~~v~k~L~~~Gi~~~~~~~p~~ 942 (1058)
++...+.++|+++|++. ++++ ..| .| .+ +-+++.+- .... ...+..+.++|.++|+.+.... .
T Consensus 327 --~~~~~~g~~l~~~L~~l~~~~~~v~~vrg-~G-l~--~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---~ 397 (443)
T PRK08360 327 --KRAEKLGNYTKKRLEEMKKKHELIGDVRG-IG-LM--IGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFFS---G 397 (443)
T ss_pred --HHHHHHHHHHHHHHHHHHHhCCCeeeeec-cc-eE--EEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeecC---C
Confidence 34446667888888764 3332 222 12 22 12222100 0000 0124578889999999875332 4
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 001531 943 GTLMIEPTESESKEELDRYCDALISIREEIAQIENGKA 980 (1058)
Q Consensus 943 ~~Lris~te~~t~eeid~fi~aL~~i~~e~~~~~~~~~ 980 (1058)
+.+|++|+..+|++|||++++++.+++.++++ |..
T Consensus 398 ~~lr~~P~l~~t~~~id~~~~~l~~~l~~~~~---~~~ 432 (443)
T PRK08360 398 NVLRIQPPLTIEKEVLDEGLDILEEAIEDVEE---GKV 432 (443)
T ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHh---ccC
Confidence 78999999999999999999999999877644 555
No 270
>PRK07337 aminotransferase; Validated
Probab=99.63 E-value=4.1e-14 Score=165.47 Aligned_cols=304 Identities=16% Similarity=0.158 Sum_probs=181.2
Q ss_pred hhcHHHHHHHHHHHHHHHhCCC--ceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEE
Q 001531 627 AQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1058)
Q Consensus 627 ~qG~~~~~~el~~~lael~G~~--~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~v 704 (1058)
.+|..++...+.+++.+..|.+ ...+..++|++. +..++++.+. .++++|+++.+.|..+...+...|.++
T Consensus 66 ~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~--al~~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~ 138 (388)
T PRK07337 66 ALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASA--ALLLACLALV-----ERGDEVLMPDPSYPCNRHFVAAAEGRP 138 (388)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHH--HHHHHHHHhc-----CCCCEEEEeCCCchhhHHHHHHcCCEE
Confidence 3566666666666666656653 334444445432 2233333331 256889999988877777788899999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCcc-cccC-cC
Q 001531 705 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG-LT 777 (1058)
Q Consensus 705 v~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~-al~g-l~ 777 (1058)
+.++.+++ +.+|+++++++++ +++++|++++|+ .+|.+- +++++|+++|+++|+++++|.++.. ...+ ..
T Consensus 139 ~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~ 215 (388)
T PRK07337 139 VLVPSGPAERFQLTAADVEAAWG---ERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPV 215 (388)
T ss_pred EEeecCCccCCcCCHHHHHhhcC---ccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCc
Confidence 99999753 5899999999986 788999999994 688864 3689999999999999999988631 1111 11
Q ss_pred CCCccCCcEE-EeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHH
Q 001531 778 SPGYIGADVC-HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPIS 856 (1058)
Q Consensus 778 ~pg~~GaDi~-~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a 856 (1058)
....++.+++ +.+++|.|+.| |.++|++.+++++...+-.. .....++.+...+.. +
T Consensus 216 ~~~~~~~~vi~~~S~SK~~~~~----G~RiG~~~~~~~l~~~l~~~--------------~~~~~~~~s~~~q~~----~ 273 (388)
T PRK07337 216 SALSLGDDVITINSFSKYFNMT----GWRLGWLVVPEALVGTFEKL--------------AQNLFICASALAQHA----A 273 (388)
T ss_pred ChhhccCCEEEEEechhhcCCc----hhheeeeecCHHHHHHHHHH--------------HHHhccCCChHHHHH----H
Confidence 1123344554 56788988544 67899999887655433100 000011111112211 1
Q ss_pred HHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHH-HHCCccc
Q 001531 857 YTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL-MDYGFHG 934 (1058)
Q Consensus 857 ~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L-~~~Gi~~ 934 (1058)
..++..-+.+.+++..+...++.+++.+.|++. +.+.. .+.+..+ ++++++........+..+++++| .++|+.+
T Consensus 274 ~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~-~p~~g~f--~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v 350 (388)
T PRK07337 274 LACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPV-MPDGAFY--VYADCRGVAHPAAGDSAALTQAMLHDAGVVL 350 (388)
T ss_pred HHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCeeEE--EEEecccccCCCCCCHHHHHHHHHHhCCEEE
Confidence 111111111224444455557778888888874 22211 2223222 56676532111124677888775 4789986
Q ss_pred cC-CCCC---CCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 001531 935 PT-MSWP---VPGTLMIEPTESESKEELDRYCDALIS 967 (1058)
Q Consensus 935 ~~-~~~p---~~~~Lris~te~~t~eeid~fi~aL~~ 967 (1058)
.. ..|. ..+.+||++.. +.++++..++.|.+
T Consensus 351 ~pg~~f~~~~~~~~~Ri~~~~--~~~~l~~~l~rl~~ 385 (388)
T PRK07337 351 VPGRDFGPHAPRDYIRLSYAT--SMSRLEEAVARLGK 385 (388)
T ss_pred eCchhhCCCCCCCEEEEEecC--CHHHHHHHHHHHHH
Confidence 32 2232 25799999975 46666666555544
No 271
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.63 E-value=2.3e-14 Score=168.99 Aligned_cols=143 Identities=20% Similarity=0.160 Sum_probs=120.4
Q ss_pred HHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch--
Q 001531 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-- 289 (1058)
Q Consensus 212 ~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~-- 289 (1058)
...++++.+|++.|.+. +.++.+||+|+.+++.++ + ++||+||++..+|+++...+...++..|++++++|++
T Consensus 65 ~~~~le~~lA~l~g~~~--av~~sSGt~Al~~al~~l-l--~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~ 139 (433)
T PRK08134 65 TVAVLEERVAALEGGVG--AIATASGQAALHLAIATL-M--GAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPGDI 139 (433)
T ss_pred HHHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHH-h--CCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCCCH
Confidence 35668899999999876 678999999998887776 3 3799999999999998887765556789999999865
Q ss_pred -hhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccc
Q 001531 290 -DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFG 360 (1058)
Q Consensus 290 -~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg 360 (1058)
++++ ++++|++|++++| |.+|.+.|+++|+++||++|++++|| ..++.+.+..|-++|||+++.|+ |.++
T Consensus 140 ~~l~~~i~~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD-~t~a~~~~~~pl~~GaD~vv~S~tK~l~ 213 (433)
T PRK08134 140 DGWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVD-STFTTPYLLRPFEHGADLVYHSATKFLG 213 (433)
T ss_pred HHHHHhcCCCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhcCCCEEEeccccccC
Confidence 4555 7889999999887 78999999999999999999999994 35666766677899999999999 6554
No 272
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.63 E-value=5e-15 Score=171.18 Aligned_cols=290 Identities=20% Similarity=0.215 Sum_probs=184.1
Q ss_pred HHHHHHHHHhC------CCce-eeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEc
Q 001531 636 NLGEWLCTITG------FDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (1058)
Q Consensus 636 el~~~lael~G------~~~~-~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~ 708 (1058)
++++.+++.++ .+.. .+..++|++.....+. ..+ . ..+++.|+++.+.|..+...++..|++++.++
T Consensus 48 ~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~--~~~-~---~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~ 121 (363)
T PF00155_consen 48 ELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLL--RLL-K---INPGDTVLVPDPCYPSYIEAARLLGAEVIPVP 121 (363)
T ss_dssp HHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHH--HHH-H---SSTTSEEEEEESSSTHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHHHHhhhccCcccccceEEEEecccccchhhhh--hcc-c---ccccccceecCCccccccccccccCceeeecc
Confidence 45555666655 4555 6777788764422222 221 1 12467899999988878888999999999999
Q ss_pred CC--CCCCCCHHHHHHHHHhcC-C--CeEEEEEEcCC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCcccccCcC---
Q 001531 709 TD--AKGNINIEELRKAAEANR-D--NLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLT--- 777 (1058)
Q Consensus 709 ~d--~~g~iD~e~L~~~i~~~~-~--~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~al~gl~--- 777 (1058)
.+ .++.+|+++|++.+++.. + ++.+|++++|+ .+|..- +++++|+++|+++|+++++|.++.....+-.
T Consensus 122 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~ 201 (363)
T PF00155_consen 122 LDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFG 201 (363)
T ss_dssp EEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTH
T ss_pred ccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccC
Confidence 65 457899999999998531 1 56899999995 688764 3678888889999999999998742221100
Q ss_pred --CC-CccCCc-EEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHH
Q 001531 778 --SP-GYIGAD-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (1058)
Q Consensus 778 --~p-g~~GaD-i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~ 853 (1058)
.. .+.+.+ +++.+++|.|+.| |.++|++++++.+.+.+.... .....+ ...+.
T Consensus 202 ~~~~~~~~~~~vi~~~S~SK~~g~~----GlRvG~i~~~~~~~~~l~~~~--------------~~~~~~--~~~~~--- 258 (363)
T PF00155_consen 202 PIRSLLDEDDNVIVVGSLSKSFGLP----GLRVGYIVAPPELIERLRRFQ--------------RSGLSS--SPMQA--- 258 (363)
T ss_dssp HHHGHHTTTSTEEEEEESTTTTTSG----GGTEEEEEEEHHHHHHHHHHH--------------HHTTSS--HHHHH---
T ss_pred cccccccccccceeeeecccccccc----ccccccccchhhhhhhhhhcc--------------cccccc--chhhH---
Confidence 00 012334 6777888888544 677999999876655432100 000111 11121
Q ss_pred HHHHHHHHHHch--hhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHC-
Q 001531 854 PISYTYIAMMGS--KGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY- 930 (1058)
Q Consensus 854 ~~a~a~l~~lG~--eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~- 930 (1058)
++...+..-+. +-+++..+....+++++.+.|++. .+.+.++++.++ +++.... .+..++.+.|.++
T Consensus 259 -~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~~~~~--~~~~~~~------~~~~~l~~~L~~~~ 328 (363)
T PF00155_consen 259 -AAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVLPPEAGFF--LWVRLDP------NDAEELAQELLEEY 328 (363)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHSBSSE--EEEEESH------HHHHHHHHHHHHHH
T ss_pred -HHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhheeeccCccE--EEEEccc------chHHHHHHHHHHhC
Confidence 11222222221 134556667778889999999875 332222223332 3444431 1467899999987
Q ss_pred CccccC-CCCCCCCEEEEEcCCCCCHHHHHHHHHHH
Q 001531 931 GFHGPT-MSWPVPGTLMIEPTESESKEELDRYCDAL 965 (1058)
Q Consensus 931 Gi~~~~-~~~p~~~~Lris~te~~t~eeid~fi~aL 965 (1058)
||.+.. ..|..++.+||++ -..+++++++++++|
T Consensus 329 gi~v~pg~~~~~~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 329 GILVRPGSYFGVPGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp TEEEEEGGGGTSTTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred CEEEEecCCCCCCCEEEEEe-ccCCHHHHHHHHhhC
Confidence 998643 2333578999999 667899999999875
No 273
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.63 E-value=4.7e-14 Score=163.77 Aligned_cols=210 Identities=17% Similarity=0.121 Sum_probs=154.7
Q ss_pred HHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---hh
Q 001531 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---DI 291 (1058)
Q Consensus 215 e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~---~l 291 (1058)
.+++.++.|.|.+. +.++.+|++|+.++++++ + ++||+||+++..|+.+...++..++..|+++.+++.+ ++
T Consensus 68 ~Le~~la~le~~~~--~v~~sSG~aAi~~~l~al-l--~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~~~e~l 142 (395)
T PRK05967 68 ALCKAIDALEGSAG--TILVPSGLAAVTVPFLGF-L--SPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPEIGAGI 142 (395)
T ss_pred HHHHHHHHHhCCCC--EEEECcHHHHHHHHHHHh-c--CCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCCCHHHH
Confidence 45678899988665 678888999999888776 3 3899999999999999887766677899999999873 46
Q ss_pred hc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCCCC
Q 001531 292 DY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGP 368 (1058)
Q Consensus 292 ~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~GGP 368 (1058)
++ ++++|++|++++| |.+|.+.|+++|+++||++|++++|| +.++.+++..|.++||||++.|+ |.+++ -|+-
T Consensus 143 ~~al~~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD-~t~a~p~~~~pl~~GaDivv~S~tKy~~G---h~d~ 218 (395)
T PRK05967 143 AKLMRPNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMD-NTWATPLYFRPLDFGVDISIHAATKYPSG---HSDI 218 (395)
T ss_pred HHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEE-CCccCceecChhHcCCCEEEEecccccCC---CCCe
Confidence 66 7889999999997 78999999999999999999999994 46666777789999999999999 65442 2222
Q ss_pred ceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHH
Q 001531 369 HAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQ 448 (1058)
Q Consensus 369 ~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~ 448 (1058)
-+|++..++++.+++ ...++..|.. + ++. ..|+...|-+-|.-..+
T Consensus 219 ~~G~v~~~~~~~~~l-------------------------~~~~~~~G~~-~---~p~-----da~l~~rgl~Tl~lR~~ 264 (395)
T PRK05967 219 LLGTVSANEKCWPQL-------------------------LEAHGTLGLC-A---GPD-----DTYQILRGLRTMGIRLE 264 (395)
T ss_pred eEEEEEcCHHHHHHH-------------------------HHHHHHcCCC-C---CHH-----HHHHHHcCcccHHHHHH
Confidence 346555555433222 0011111110 0 111 13456666666666778
Q ss_pred HHHHHHHHHHHHHhcCCCe
Q 001531 449 RVHGLAGTFALGLKKLGTV 467 (1058)
Q Consensus 449 ~~~~~a~~l~~~L~~~G~~ 467 (1058)
+..++|..+++.|++.+.+
T Consensus 265 ~~~~na~~lA~~L~~hp~v 283 (395)
T PRK05967 265 HHRKSALEIARWLEGRPDV 283 (395)
T ss_pred HHHHHHHHHHHHHHhCCCC
Confidence 8889999999999987544
No 274
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.63 E-value=5.4e-14 Score=162.78 Aligned_cols=212 Identities=21% Similarity=0.186 Sum_probs=152.6
Q ss_pred HHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---h
Q 001531 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---D 290 (1058)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~---~ 290 (1058)
..+|+.||+|.|.+. +.+|.+|.+|+.++++++. ++||+|++++..+..+...++.....+|+++.++|.. +
T Consensus 58 ~~le~~la~Le~g~~--a~~~~SGmaAi~~~l~~ll---~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~d~~~ 132 (386)
T PF01053_consen 58 RALEQRLAALEGGED--ALLFSSGMAAISAALLALL---KPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPTDLEA 132 (386)
T ss_dssp HHHHHHHHHHHT-SE--EEEESSHHHHHHHHHHHHS----TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTTSHHH
T ss_pred HHHHHHHHHhhcccc--eeeccchHHHHHHHHHhhc---ccCCceEecCCccCcchhhhhhhhcccCcEEEEeCchhHHH
Confidence 346689999999865 8889999999988888773 2799999999999999999988788899999999874 4
Q ss_pred hhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcC-cEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCC
Q 001531 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANG-VKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1058)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~g-alliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1058)
+++ ++++|++|++..| |.+..+.||++|+++||++| ++++| ++.++-+++..|-++||||++.|+ |.+++. |
T Consensus 133 l~~~l~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vV-DnT~atp~~~~pL~~GaDivv~S~TKyl~Gh---s 208 (386)
T PF01053_consen 133 LEAALRPNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVV-DNTFATPYNQNPLELGADIVVHSATKYLSGH---S 208 (386)
T ss_dssp HHHHHCTTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEE-ECTTTHTTTC-GGGGT-SEEEEETTTTTTTS---S
T ss_pred HHhhccccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEe-eccccceeeeccCcCCceEEEeeccccccCC---c
Confidence 555 7889999999998 88999999999999999999 99999 467777888889999999999998 877532 2
Q ss_pred CCceEEEEEeh--hhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHH
Q 001531 367 GPHAAFLATSQ--EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 444 (1058)
Q Consensus 367 GP~~G~l~~~~--~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~ 444 (1058)
.--+|.+.++. ++.+++- ..++.-| +.. + .. ..|+...|-+-+.
T Consensus 209 dv~~G~vv~~~~~~~~~~l~-------------------------~~~~~~G--~~~--~---p~--da~ll~rgl~Tl~ 254 (386)
T PF01053_consen 209 DVMGGAVVVNGSSELYDRLR-------------------------EFRRLLG--ATL--S---PF--DAWLLLRGLRTLP 254 (386)
T ss_dssp SE-EEEEEESSHHHHHHHHH-------------------------HHHHHHT---B-------HH--HHHHHHHHHTTHH
T ss_pred ceeeEEEEECchhhhhhhhc-------------------------chhhhcC--ccc--h---HH--HHHHHhcCCCcHH
Confidence 22257777664 3433320 0011111 110 1 11 1133444555566
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeE
Q 001531 445 TIAQRVHGLAGTFALGLKKLGTVE 468 (1058)
Q Consensus 445 ~ia~~~~~~a~~l~~~L~~~G~~~ 468 (1058)
...++..++|..+++.|++.+.++
T Consensus 255 ~R~~~~~~nA~~lA~~L~~hp~V~ 278 (386)
T PF01053_consen 255 LRMERQNENAEALAEFLEEHPKVK 278 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCC
Confidence 667777899999999999986565
No 275
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.63 E-value=8.8e-15 Score=168.82 Aligned_cols=280 Identities=17% Similarity=0.163 Sum_probs=178.3
Q ss_pred HHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCCC
Q 001531 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1058)
Q Consensus 635 ~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g~ 714 (1058)
.++++++++.+|++..++..++|++. ++.++++.+.. + ++++|+++.+.|+.+...++..|++++.++.++++.
T Consensus 60 ~~l~~~~a~~~g~~~~~I~~~~Gs~e--~i~~~~~~~~~-~---g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~~~ 133 (351)
T PRK01688 60 KAVIENYAAYAGVKPEQVLVSRGADE--GIELLIRAFCE-P---GKDAILYCPPTYGMYSVSAETIGVEIRTVPTLDNWQ 133 (351)
T ss_pred HHHHHHHHHHhCCCHHHEEEcCCHHH--HHHHHHHHhcC-C---CCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCCCCC
Confidence 36788999999999877777777652 34444554421 1 237899988877667777889999999999988888
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHH---HHHcCCEEEEeccCcccccCcCCCC---ccCCc-E
Q 001531 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKI---IHDNGGQVYMDGANMNAQVGLTSPG---YIGAD-V 786 (1058)
Q Consensus 715 iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~l---ah~~g~lv~vD~a~~~al~gl~~pg---~~GaD-i 786 (1058)
+|++++++++ +++++|++++|| .+|.+. +.+++.++ |++ ++++++|+++.- +....... ..... +
T Consensus 134 ~d~~~l~~~~----~~~~lv~l~nPnNPTG~~~-~~~~l~~l~~~~~~-~~~vivDEay~~-f~~~~s~~~~~~~~~n~i 206 (351)
T PRK01688 134 LDLPAIADNL----DGVKVVYVCSPNNPTGNLI-NPQDLRTLLELTRG-KAIVVADEAYIE-FCPQASLAGWLAEYPHLV 206 (351)
T ss_pred CCHHHHHHhc----cCCcEEEEeCCCCCCCCCC-CHHHHHHHHHhCCC-CcEEEEECchhh-cCCCCChHHHHhhCCCEE
Confidence 9999999887 478899999995 799987 45555554 444 689999998631 11110100 01123 4
Q ss_pred EEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001531 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1058)
Q Consensus 787 ~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1058)
+..+++|+|+ ..|.++|++.+++++.+.+.... ...++++ ....++.+++..-+.+
T Consensus 207 v~rSfSK~~g----laGlRiGy~i~~~~~i~~l~~~~--------------~~~~v~~------~~~~~a~~~L~~~~~~ 262 (351)
T PRK01688 207 ILRTLSKAFA----LAGLRCGFTLANEEVINLLLKVI--------------APYPLST------PVADIAAQALSPQGIA 262 (351)
T ss_pred EEecchHhhc----CHHHHHhHHhCCHHHHHHHHhcc--------------CCCCCCH------HHHHHHHHHHhcchHH
Confidence 5566777774 34678899998877655432110 0011221 1111222222211223
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCC-C-CCC
Q 001531 867 GLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-W-PVP 942 (1058)
Q Consensus 867 Gl~~~a~~~~~~a~yL~~~L~~~--~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~-~-p~~ 942 (1058)
-+++..+...++++++.+.|+++ +...++ .+. +-+.+++. +..++.++|.++||.+.... + ...
T Consensus 263 ~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p--s~~--nfi~~~~~--------~~~~l~~~L~~~gi~vr~~~~~~~~~ 330 (351)
T PRK01688 263 AMRERVAEINANRQWLIAALKEIPCVEQVFD--SET--NYILARFT--------ASSAVFKSLWDQGIILRDQNKQPGLS 330 (351)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCeECC--CCC--cEEEEEcC--------CHHHHHHHHHHCCeEEEECCCcCCCC
Confidence 34455555667788999999875 222232 121 22445542 46789999999999875432 3 246
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHH
Q 001531 943 GTLMIEPTESESKEELDRYCDALI 966 (1058)
Q Consensus 943 ~~Lris~te~~t~eeid~fi~aL~ 966 (1058)
+.+||++. +.+|+++|+++|+
T Consensus 331 ~~iRis~~---~~~e~~~l~~al~ 351 (351)
T PRK01688 331 NCLRITIG---TREECQRVIDALR 351 (351)
T ss_pred CeEEEeCC---CHHHHHHHHHhhC
Confidence 89999985 6899999999873
No 276
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.63 E-value=8.6e-15 Score=169.77 Aligned_cols=278 Identities=11% Similarity=0.128 Sum_probs=176.0
Q ss_pred HHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCCC
Q 001531 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1058)
Q Consensus 635 ~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g~ 714 (1058)
.++++.+++.+|.+...+..++|++. ++.++++.+. .++++|+++.+.+..+...+.+.|++++.|+.+ ++.
T Consensus 67 ~~Lr~aia~~~~~~~~~I~vt~Gs~e--~i~~~~~~l~-----~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~-~~~ 138 (366)
T PRK01533 67 TTLRQTIANKLHVKMEQVLCGSGLDE--VIQIISRAVL-----KAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN-NGV 138 (366)
T ss_pred HHHHHHHHHHhCCCcceEEECCCHHH--HHHHHHHHhc-----CCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC-CCC
Confidence 46778888889998877767677652 3344444432 256789998876655666688999999999986 456
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcCC-Ccccccc--cHHHHHHHHHHcCCEEEEeccCccccc---CcCCC--C--ccCC
Q 001531 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQV---GLTSP--G--YIGA 784 (1058)
Q Consensus 715 iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~--dI~eI~~lah~~g~lv~vD~a~~~al~---gl~~p--g--~~Ga 784 (1058)
+|+++|+++++ +++++|++++|| .+|.+-+ .+++|+++|++++ ++++|+++.. +. ....+ . ..+-
T Consensus 139 ~d~~~l~~~~~---~~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~-~~~~~~~~~~~~~~~~~~~ 213 (366)
T PRK01533 139 YDLDEISSVVD---NDTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYE-YVTAKDFPETLPLLEKHKN 213 (366)
T ss_pred cCHHHHHHHhC---cCCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHH-hhccccCcchhHHhccCCC
Confidence 99999999986 678899999995 7999862 3555555555555 6788998631 11 00010 0 1122
Q ss_pred cEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHc
Q 001531 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1058)
Q Consensus 785 Di~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1058)
-|++.++.|+|++| |.++|++.+++++...+-.. ....+++ ...+ .++.+++. .
T Consensus 214 vi~~~SfSK~~~l~----GlRiG~~i~~~~~~~~l~~~--------------~~~~~~~--~~~q----~aa~~~l~--~ 267 (366)
T PRK01533 214 ILVLRTFSKAYGLA----SFRVGYAVGHEELIEKLNVV--------------RLPFNVS--SLAQ----KAATIAFG--D 267 (366)
T ss_pred EEEEeCchHHhcCh----HHHHhHHhCCHHHHHHHHHh--------------cCCCCcC--HHHH----HHHHHHhC--C
Confidence 36667788887644 78899998876655443110 0111111 1112 11222221 1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCC
Q 001531 865 SKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPG 943 (1058)
Q Consensus 865 ~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~ 943 (1058)
.+-+++..+...++.+++.+.|+.. +++ + .+++.+ ++++++ +..++.+.|.++||.+.. | ++
T Consensus 268 ~~~~~~~~~~~~~~r~~~~~~l~~~g~~~-~-~~~~nf---~~~~~~--------~~~~~~~~l~~~GI~Vr~--~--~~ 330 (366)
T PRK01533 268 DEFIEEIVRVNTEGLRQYESFCKENEIPF-Y-QSQTNF---IFLPVE--------NGGEIYEACAHAGFIIRP--F--PN 330 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCcc-C-CCcCcE---EEEeCC--------CHHHHHHHHHHCCcEEcc--C--CC
Confidence 2223444445556667777777664 333 2 222322 455543 357899999999999874 3 47
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 944 TLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 944 ~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
++||++ .+.+|.++|+++|+++++-
T Consensus 331 ~iRis~---~~~~~~~~l~~al~~~~~~ 355 (366)
T PRK01533 331 GVRITV---GTREQNEGVISVLQQHFEN 355 (366)
T ss_pred ceEEeC---CCHHHHHHHHHHHHHHHHh
Confidence 899998 5689999999999887543
No 277
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.63 E-value=5.7e-14 Score=165.80 Aligned_cols=272 Identities=14% Similarity=0.121 Sum_probs=174.2
Q ss_pred HHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHH-hhcCCCeEEEEeCc------
Q 001531 216 FQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICIT-RADGFDIKVVVSDL------ 288 (1058)
Q Consensus 216 ~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~-~a~~~gi~v~~v~~------ 288 (1058)
.+..+++++|.+.+++ ++.+||.+.++++.++ . ++||+|+++...|+++...+.. .....|++++.++.
T Consensus 76 ~~~~la~~~g~~~~~i-~~~sgt~al~~~l~~l-~--~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 151 (416)
T PRK00011 76 AIDRAKELFGAEYANV-QPHSGSQANAAVYFAL-L--KPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGL 151 (416)
T ss_pred HHHHHHHHhCCCceee-ecCCchHHHHHHHHHh-c--CCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCC
Confidence 3558999999987554 4456788777777666 3 3899999999999875433211 11234666666543
Q ss_pred ---hhhhc-cC-CCEeEEEEEcCCCceeeccHHHHHHHHHhcCcEEEEEeccccccCC-----CCCCcccceEEEecC-c
Q 001531 289 ---KDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-----KPPGELGADIVVGSA-Q 357 (1058)
Q Consensus 289 ---~~l~~-l~-~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l-----~~p~~~GaDivvgs~-k 357 (1058)
+++++ ++ .++++|++..+ .+|...|+++|+++||++|+++++|+ .++.|.. ..+-. ++|++++|+ |
T Consensus 152 ~d~~~l~~~i~~~~~k~v~~~~~-~~~~~~~~~~I~~la~~~~~~livD~-a~~~g~~~~g~~~~~~~-~~di~~~S~~K 228 (416)
T PRK00011 152 IDYDEVEKLALEHKPKLIIAGAS-AYSRPIDFKRFREIADEVGAYLMVDM-AHIAGLVAAGVHPSPVP-HADVVTTTTHK 228 (416)
T ss_pred cCHHHHHHHHHhcCCCEEEECCC-cCCCccCHHHHHHHHHHcCCEEEEEC-cchhcccccCccCCCCC-CCcEEEecCCc
Confidence 34555 54 36888877654 46777899999999999999999943 3334432 12233 789999998 7
Q ss_pred ccccccCCCCCceEEEEEe-hhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHH
Q 001531 358 RFGVPMGYGGPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAV 436 (1058)
Q Consensus 358 ~lg~P~~~GGP~~G~l~~~-~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~ 436 (1058)
+|+ ||.+|++.++ +++.+++... +...+ .+++. .....++.++. .
T Consensus 229 ~l~------g~~gg~i~~~~~~~~~~l~~~--------------------~~~~~---~~~~~---~~~~aa~~~a~--~ 274 (416)
T PRK00011 229 TLR------GPRGGLILTNDEELAKKINSA--------------------VFPGI---QGGPL---MHVIAAKAVAF--K 274 (416)
T ss_pred CCC------CCCceEEEeCCHHHHHHHHHH--------------------hCccc---cCCcc---HHHHHHHHHHH--H
Confidence 663 3555777775 5666554100 00000 00111 11222222222 2
Q ss_pred HhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcC-CCCccEEEEecC----CHHHHHHHHHHcCceeee----c-----
Q 001531 437 YHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LPFFDTVKVKCA----DAHAIASAAYKIEMNLRV----V----- 502 (1058)
Q Consensus 437 ~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~-~~~~~~v~i~~~----~~~~l~~~L~~~GI~~~~----~----- 502 (1058)
....++++++.++..++++++++.|+++| +++.. ......+.+.++ ...++.+.|.++||.++. .
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~ 353 (416)
T PRK00011 275 EALEPEFKEYAQQVVKNAKALAEALAERG-FRVVSGGTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSP 353 (416)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHhCC-CeeeecCCCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCC
Confidence 23356788899999999999999999987 88753 121223444443 257788999999998862 1
Q ss_pred -cCCeEEEEecc----CCCHHHHHHHHHHHhC
Q 001531 503 -DSNTVTASFDE----TTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 503 -~~~~lris~~~----~~t~edid~ll~al~~ 529 (1058)
.+..+|++.+. ..|++|++.++++|..
T Consensus 354 ~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~ 385 (416)
T PRK00011 354 FVTSGIRIGTPAITTRGFKEAEMKEIAELIAD 385 (416)
T ss_pred CCCCceEecCHHHhhcCcCHHHHHHHHHHHHH
Confidence 13568987644 4569999999999863
No 278
>PRK07550 hypothetical protein; Provisional
Probab=99.63 E-value=7.2e-14 Score=163.28 Aligned_cols=350 Identities=12% Similarity=0.102 Sum_probs=206.4
Q ss_pred HHHHHHHHHHhcCccCcCcccccccccccCCccccccccccccc--ccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCC
Q 001531 571 HELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPS--FANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD 648 (1058)
Q Consensus 571 ~e~~r~~~~l~~~~~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~--f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~ 648 (1058)
.++.+.+.++++.+. ..+.|+++.+.+++........... -.....|.+ .+|..++...+.+++.+..|..
T Consensus 15 ~~~~~~~~~~~~~~~----~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~lr~~ia~~~~~~~g~~ 87 (386)
T PRK07550 15 PEVRAWLAGYDGADG----PLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGP---VEGLPELREAYAAHYSRLYGAA 87 (386)
T ss_pred HHHHHHHHHHhhcCC----CeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCC---CCCCHHHHHHHHHHHHHHhCCC
Confidence 566677777665543 3577887776554322221111000 001122333 3577777777777777776754
Q ss_pred --ceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCC-C-CCCCHHHHHHHH
Q 001531 649 --SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-K-GNINIEELRKAA 724 (1058)
Q Consensus 649 --~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~-~-g~iD~e~L~~~i 724 (1058)
...+..++|++. +..++++.+. +++++|+++.+.+..+...++..|++++.++.++ + ..+|++++++++
T Consensus 88 ~~~~~i~~t~G~~~--al~~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~ 160 (386)
T PRK07550 88 ISPEQVHITSGCNQ--AFWAAMVTLA-----GAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALI 160 (386)
T ss_pred CCcceEEEecCcHH--HHHHHHHHhc-----CCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHh
Confidence 334455555432 2233333331 2568899998877777777889999999999975 3 468999999999
Q ss_pred HhcCCCeEEEEEEcCC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCcccccCcCCC---C---ccCC-cEEEeCCccc
Q 001531 725 EANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP---G---YIGA-DVCHLNLHKT 794 (1058)
Q Consensus 725 ~~~~~~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~p---g---~~Ga-Di~~~s~hKt 794 (1058)
+ +++++|++++|| .+|.+- +++++|+++|+++|+++++|+++..-......+ . ..+. .+++.+++|+
T Consensus 161 ~---~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 237 (386)
T PRK07550 161 T---PRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKS 237 (386)
T ss_pred c---ccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhh
Confidence 7 678888888885 688764 258999999999999999999863111000011 1 1122 2557788998
Q ss_pred cccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHH
Q 001531 795 FCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKI 874 (1058)
Q Consensus 795 f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~ 874 (1058)
|+.| |.++|++.+++++...+... . .....+.+..++.. +...+..+ ++-+++..+.
T Consensus 238 ~g~~----G~RiG~i~~~~~~~~~~~~~-~-------------~~~~~~~s~~~q~~----~~~~l~~~-~~~~~~~~~~ 294 (386)
T PRK07550 238 YALT----GHRVGAVVASPARIAEIEKF-M-------------DTVAICAPRIGQIA----VAWGLPNL-ADWRAGNRAE 294 (386)
T ss_pred ccCc----ccceEeeecCHHHHHHHHHH-H-------------hhcccCCCcHHHHH----HHHHhccH-HHHHHHHHHH
Confidence 8544 67899999987654433110 0 00111211222221 11122211 2233344445
Q ss_pred HHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHH-HCCccccC-CCCC--CCCEEEEEcC
Q 001531 875 AILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHGPT-MSWP--VPGTLMIEPT 950 (1058)
Q Consensus 875 ~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~-~~Gi~~~~-~~~p--~~~~Lris~t 950 (1058)
..++.+++.+.|+++..+... +.+.. -++++++. .+.+..+++++|. ++|+.+.. ..|. ..+.+||++.
T Consensus 295 ~~~~~~~l~~~L~~~~~~~~~-~~g~~--~~~~~~~~----~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~ 367 (386)
T PRK07550 295 IARRRDAFRAVFARLPGWELL-ASGAY--FAYVRHPF----PDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFA 367 (386)
T ss_pred HHHHHHHHHHHHHhCCCceeC-CCceE--EEEecCCC----CCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEee
Confidence 556778888888764222111 12322 24555541 1467889999875 68998643 2232 2468999997
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 001531 951 ESESKEELDRYCDALISI 968 (1058)
Q Consensus 951 e~~t~eeid~fi~aL~~i 968 (1058)
. .+.+++++.++.|.+.
T Consensus 368 ~-~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 368 N-ADVAGIGELVERLRAF 384 (386)
T ss_pred c-CCHHHHHHHHHHHHhh
Confidence 4 3578888888877653
No 279
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.63 E-value=3.6e-14 Score=164.15 Aligned_cols=282 Identities=14% Similarity=0.143 Sum_probs=179.8
Q ss_pred HHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCCC
Q 001531 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1058)
Q Consensus 635 ~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g~ 714 (1058)
.++++.+++.+|.+...+..++|++. +..++++.+. .++++|+++.+.++.+...+...|.+++.+|++ ++.
T Consensus 67 ~~lr~~ia~~~~~~~~~i~~t~G~~~--~l~~~~~~~~-----~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~ 138 (359)
T PRK03158 67 PELRTKVAKHLGVDEEQLLFGAGLDE--VIQMISRALL-----NPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK-DGG 138 (359)
T ss_pred HHHHHHHHHHhCCCHHHEEECCCHHH--HHHHHHHHHh-----CCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC-CCC
Confidence 46778888888887665666666653 2333344432 246789998875544445577899999999997 677
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHH--cCCEEEEeccCcccc-cCc-CCC----CccCCc
Q 001531 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQ-VGL-TSP----GYIGAD 785 (1058)
Q Consensus 715 iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~--~g~lv~vD~a~~~al-~gl-~~p----g~~GaD 785 (1058)
+|+++++++++ +++++|++++|+ .+|.+- +.++|.++++. +|+++++|+++.... .+. ..+ ...+-.
T Consensus 139 ~d~~~l~~~~~---~~~~~v~i~~p~NPtG~~~-~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~v 214 (359)
T PRK03158 139 HDLEAMLKAID---EQTKIVWICNPNNPTGTYV-NHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENL 214 (359)
T ss_pred cCHHHHHHhcC---CCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCE
Confidence 99999999886 688889999994 799987 67888888876 599999999864211 111 011 112344
Q ss_pred EEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHch
Q 001531 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1058)
Q Consensus 786 i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1058)
+++.++.|+|+.| |.++|++.+++++.+.+-.. ..+ .+.+..++ .++..++. ..
T Consensus 215 i~~~S~SK~~g~~----GlRiG~~v~~~~~~~~~~~~--------------~~~--~~~~~~~q----~~~~~~l~--~~ 268 (359)
T PRK03158 215 IVLRTFSKAYGLA----ALRVGYGIASEELIEKLNIA--------------RPP--FNTTRIAQ----YAAIAALE--DQ 268 (359)
T ss_pred EEEEechHhhcCc----chhhehhcCCHHHHHHHHHh--------------cCC--CCCCHHHH----HHHHHHhc--CH
Confidence 6677888887533 67789999887655443100 011 11111122 22233332 12
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccC-CCCCCCCE
Q 001531 866 KGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWPVPGT 944 (1058)
Q Consensus 866 eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~-~~~p~~~~ 944 (1058)
+-+++..+....+.+++.+.|++. .+.+..+.+.+ +++++. .+..++.+.|.++|+.+.. ..|..++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~g~~---i~~~~~-------~~~~~~~~~l~~~gv~v~~g~~f~~~~~ 337 (359)
T PRK03158 269 AFLKECVEKNAEGLEQYYAFCKEY-GLFYYPSQTNF---IFVDTG-------RDANELFEALLKKGYIVRSGAALGFPTG 337 (359)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC-CCeeCCCcCcE---EEEECC-------CCHHHHHHHHHHCCeEEeeCCCCCCCCe
Confidence 223444444456667777888764 22221222321 345542 3578899999999998643 23434689
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHHH
Q 001531 945 LMIEPTESESKEELDRYCDALISI 968 (1058)
Q Consensus 945 Lris~te~~t~eeid~fi~aL~~i 968 (1058)
+||++. +.+|+++|+++|+++
T Consensus 338 iRi~~~---~~~~~~~l~~al~~~ 358 (359)
T PRK03158 338 VRITIG---LKEQNDKIIELLKEL 358 (359)
T ss_pred EEEecC---CHHHHHHHHHHHHHh
Confidence 999975 789999999999876
No 280
>PRK07777 aminotransferase; Validated
Probab=99.63 E-value=5.7e-14 Score=164.22 Aligned_cols=298 Identities=16% Similarity=0.113 Sum_probs=184.3
Q ss_pred hcHHHHHHHHHHHHHHHhCCCc--e-e-eecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcE
Q 001531 628 QGYQEMFNNLGEWLCTITGFDS--F-S-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1058)
Q Consensus 628 qG~~~~~~el~~~lael~G~~~--~-~-l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~ 703 (1058)
+|..++...+.+++.+..|.+. . . +.+++|++|..+ ++..+. .++++|+++...|..+...+...|.+
T Consensus 61 ~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~---~~~~~~-----~~gd~vli~~p~y~~~~~~~~~~g~~ 132 (387)
T PRK07777 61 PGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAA---AVLGLV-----EPGDEVLLIEPYYDSYAAVIAMAGAH 132 (387)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHH---HHHHhc-----CCCCEEEEeCCCchhhHHHHHHCCCE
Confidence 5766666666777777778752 2 2 344444444432 233221 25678999887776666667889999
Q ss_pred EEEEcCCCC---CCCCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCcc-cccC-
Q 001531 704 IVSVGTDAK---GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG- 775 (1058)
Q Consensus 704 vv~V~~d~~---g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~-al~g- 775 (1058)
++.++.+++ +.+|+++|+++++ +++++|++++|+ .+|.+- +++++|+++|+++|+++++|+++.. ...+
T Consensus 133 ~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~ 209 (387)
T PRK07777 133 RVPVPLVPDGRGFALDLDALRAAVT---PRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGA 209 (387)
T ss_pred EEEeecCCccCCCcCCHHHHHHhcC---cccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCC
Confidence 999998765 4699999999886 678899999984 688874 3699999999999999999998631 1101
Q ss_pred ----cC-CCCccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhH
Q 001531 776 ----LT-SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (1058)
Q Consensus 776 ----l~-~pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~ 850 (1058)
+. .++..+.+++..+++|+|+.| |.++|++.+++++...+-.. ........++ + .+.
T Consensus 210 ~~~~~~~~~~~~~~~i~~~S~SK~~g~~----GlRiG~~~~~~~l~~~~~~~------------~~~~~~~~~~-~-~q~ 271 (387)
T PRK07777 210 RHLPLATLPGMRERTVTISSAAKTFNVT----GWKIGWACGPAPLIAAVRAA------------KQYLTYVGGA-P-FQP 271 (387)
T ss_pred CcccHhhCCCCcCcEEEEeechhhccCc----CceeEEEecCHHHHHHHHHH------------HhhcccCCCC-H-HHH
Confidence 11 122235678889999998644 67799999887655433110 0000001111 1 111
Q ss_pred HHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHH-
Q 001531 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM- 928 (1058)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~- 928 (1058)
++..++. .+.+-+++..+...++++++.+.|++. +++ + .+++.++ ++++++... ..+..++++.|.
T Consensus 272 ----~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~g~~~--~~~~~~~~~---~~~~~~~~~~l~~ 339 (387)
T PRK07777 272 ----AVAHALD-HEDAWVAALRDSLQAKRDRLAAGLAEAGFEV-H-DSAGTYF--LCADPRPLG---YDDGTEFCRALPE 339 (387)
T ss_pred ----HHHHHHh-CCcHHHHHHHHHHHHHHHHHHHHHHhCCCCc-c-CCCcceE--EEecccccC---CCCHHHHHHHHHH
Confidence 1112222 233334455556667888999999874 333 2 2223322 344543211 136789999997
Q ss_pred HCCccccC-CCCC-----CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001531 929 DYGFHGPT-MSWP-----VPGTLMIEPTESESKEELDRYCDALISI 968 (1058)
Q Consensus 929 ~~Gi~~~~-~~~p-----~~~~Lris~te~~t~eeid~fi~aL~~i 968 (1058)
++|+.+.. -.|. ..+.+||++.. +++++++.++.|+++
T Consensus 340 ~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~--~~~~l~~~l~~l~~~ 383 (387)
T PRK07777 340 RVGVAAIPMSVFYDPADAWNHLVRFAFCK--RDDTLDEAIRRLRAL 383 (387)
T ss_pred hCCEEEeCchHhCCCCcCCCCeEEEEecC--CHHHHHHHHHHHHHH
Confidence 57997632 2231 14689999964 577888877777654
No 281
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.63 E-value=3.4e-14 Score=172.76 Aligned_cols=301 Identities=15% Similarity=0.126 Sum_probs=194.9
Q ss_pred HHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCC
Q 001531 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1058)
Q Consensus 633 ~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~ 712 (1058)
.+.|.|+..|+++|.+.+.+..|++++|+.++++++. +++++||++++.|.+.-..+.+.|+++++++...+
T Consensus 196 ~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~--------~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn 267 (714)
T PRK15400 196 PHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSA--------PAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRN 267 (714)
T ss_pred HHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhc--------CCCCEEEeecccHHHHHHHHHHcCCeEEEeccccc
Confidence 3779999999999999988889988988877777653 35789999999999887788999999999976543
Q ss_pred -----CCCC-----HHHHHHHHHhcCCCeE---EEEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCccc--ccCcC
Q 001531 713 -----GNIN-----IEELRKAAEANRDNLS---TLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA--QVGLT 777 (1058)
Q Consensus 713 -----g~iD-----~e~L~~~i~~~~~~ta---aV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~a--l~gl~ 777 (1058)
|.++ .+.++++|+++. +.+ ++++|+|++.|++- |+++|.+++|.++ ++||+|+..- +....
T Consensus 268 ~~Gi~g~I~~~~~~~e~i~~~i~~~p-~ak~p~~~vit~pTYdG~~y-d~~~I~~~~~~~~--ilvDEAwgah~~F~p~~ 343 (714)
T PRK15400 268 AYGILGGIPQSEFQHATIAKRVKETP-NATWPVHAVITNSTYDGLLY-NTDFIKKTLDVKS--IHFDSAWVPYTNFSPIY 343 (714)
T ss_pred ccCCccCCCccccCHHHHHHHHHhCc-cccCccEEEEECCCCccEec-CHHHHHHHhCCCC--EEEEccchhhhccCccc
Confidence 4566 899999998763 333 79999999999998 8999999999987 6899986321 11111
Q ss_pred ---CCCccCC---c--EEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhh
Q 001531 778 ---SPGYIGA---D--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (1058)
Q Consensus 778 ---~pg~~Ga---D--i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~ 849 (1058)
.+-..|+ | +++.|.||+++.- -..+.|-++.. +.-..+.. ... -....|. .|..
T Consensus 344 ~~~sam~~ga~~~~~i~vtQStHKtL~al-----TQaS~LHvkg~----vd~~~~n~-------a~~-m~~STSP-sY~l 405 (714)
T PRK15400 344 EGKCGMSGGRVEGKVIYETQSTHKLLAAF-----SQASMIHVKGD----VNEETFNE-------AYM-MHTTTSP-HYGI 405 (714)
T ss_pred CCcChhhcCCCCCCceEEEEchhhcccch-----hHHhHHHHcCC----CCHHHHHH-------HHH-HHcCCCc-HHHH
Confidence 1112466 5 9999999998521 12233322211 11000000 000 0011121 2222
Q ss_pred HHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--------CCeee------------------ccCC-----
Q 001531 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--------YPILF------------------RGVN----- 898 (1058)
Q Consensus 850 ~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~--------~~v~~------------------~g~~----- 898 (1058)
.+.+-.|..+|. |+.| ++..+..++.+..++++|.++ +.+.- .|..
T Consensus 406 ~ASLD~a~~~m~--~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~ 482 (714)
T PRK15400 406 VASTETAAAMMK--GNAG-KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNE 482 (714)
T ss_pred HHHHHHHHHHHH--hhhh-HHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCccccccc
Confidence 222223333332 2234 345566677777888888653 11210 0000
Q ss_pred ----CccceEEEEeccccc-----ccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001531 899 ----GTVAHEFIVDLRGLK-----NTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIR 969 (1058)
Q Consensus 899 ----~~~~~e~vv~~~~~~-----~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~ 969 (1058)
+|. .+++.++.+. .+.|+++..+++.|.++||.+-... ..++.+.+|...|++++++++++|.++.
T Consensus 483 ~~~lDP~--Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d---~~~iLfl~s~g~t~~~~~~L~~aL~~f~ 557 (714)
T PRK15400 483 HMYLDPI--KVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTG---PYNLLFLFSIGIDKTKALSLLRALTDFK 557 (714)
T ss_pred ccccCCc--eEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecC---CCeEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 111 1233333221 1247889999999999999876444 4788888999999999999999999874
Q ss_pred HH
Q 001531 970 EE 971 (1058)
Q Consensus 970 ~e 971 (1058)
+.
T Consensus 558 ~~ 559 (714)
T PRK15400 558 RA 559 (714)
T ss_pred Hh
Confidence 43
No 282
>PRK08068 transaminase; Reviewed
Probab=99.63 E-value=6.7e-14 Score=163.76 Aligned_cols=295 Identities=11% Similarity=0.070 Sum_probs=179.9
Q ss_pred hcHHHHHHHHHHHHHHHhCC--Cce-eeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEE
Q 001531 628 QGYQEMFNNLGEWLCTITGF--DSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1058)
Q Consensus 628 qG~~~~~~el~~~lael~G~--~~~-~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~v 704 (1058)
+|..++...+.+++.+..|. +.. .+..++|++.. +..+++.+. .+++.|+++...++.+...+++.|+++
T Consensus 70 ~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~--l~~~~~~~~-----~~gd~vlv~~P~y~~~~~~~~~~g~~~ 142 (389)
T PRK08068 70 RGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAG--LVELPQCLM-----NPGDTILVPDPGYPDYLSGVALARAQF 142 (389)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHH--HHHHHHHhC-----CCCCEEEEcCCCCcchHHHHHhcCCEE
Confidence 57666666666666555574 333 44444554422 222333331 256789999988877777789999999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCcc-cccCcCC
Q 001531 705 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVGLTS 778 (1058)
Q Consensus 705 v~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~-al~gl~~ 778 (1058)
+.+|++++ ..+|++++++++. +++++|++++|| ++|.+- +.+++|.++|+++|+++++|+++.. ...+...
T Consensus 143 ~~i~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~ 219 (389)
T PRK08068 143 ETMPLIAENNFLPDYTKIPEEVA---EKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKP 219 (389)
T ss_pred EEeecccccCCCCCHHHHHHhcc---ccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCC
Confidence 99999754 4689999999886 678899999995 789885 2478899999999999999998631 1111000
Q ss_pred -C-----CccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHH
Q 001531 779 -P-----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1058)
Q Consensus 779 -p-----g~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~ 852 (1058)
+ +...-.+++.++.|+|+.| |-++|++++++++...+-.. . ....++.. +..
T Consensus 220 ~s~~~~~~~~~~~i~~~S~SK~~g~~----GlRiG~~~~~~~l~~~l~~~------------~--~~~~~~~~----~~~ 277 (389)
T PRK08068 220 VSFLQTPGAKDVGIELYTLSKTFNMA----GWRVAFAVGNESVIEAINLL------------Q--DHLFVSLF----GAI 277 (389)
T ss_pred cChhhCCCccCCEEEEecchhccCCc----cceeEeEecCHHHHHHHHHH------------H--hhccCCCC----hHH
Confidence 1 1112236677888888544 78899999887665543100 0 00111211 011
Q ss_pred HHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHH-C
Q 001531 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD-Y 930 (1058)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~-~ 930 (1058)
..++..++. -+.+-+++..+...++.+++.+.|++. +.+ + .+.+.++ +++++++ +.+..++.+.|.+ +
T Consensus 278 q~~~~~~l~-~~~~~~~~~~~~~~~~r~~~~~~L~~~g~~~-~-~~~g~~~--~~v~~~~-----~~~~~~~~~~l~~~~ 347 (389)
T PRK08068 278 QDAAIEALL-SDQSCVAELVARYESRRNAFISACREIGWEV-D-APKGSFF--AWMPVPK-----GYTSEQFADLLLEKA 347 (389)
T ss_pred HHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHCCCcc-c-CCCeeEE--EEEECCC-----CCCHHHHHHHHHHhC
Confidence 111112221 133445556666677788898999875 332 1 2223221 3566642 3577899999985 6
Q ss_pred Ccccc-CCCCCC--CCEEEEEcCCCCCHHHHHHHHHHHH
Q 001531 931 GFHGP-TMSWPV--PGTLMIEPTESESKEELDRYCDALI 966 (1058)
Q Consensus 931 Gi~~~-~~~~p~--~~~Lris~te~~t~eeid~fi~aL~ 966 (1058)
||.+. ...|+. .+.+||++.. .++.+...++.|.
T Consensus 348 gi~v~pg~~f~~~~~~~iRi~~~~--~~~~l~~al~~l~ 384 (389)
T PRK08068 348 HVAVAPGNGFGEHGEGYVRVGLLT--DEERLREAVERIG 384 (389)
T ss_pred CEEEecchHhCccCCCeEEEEEcC--CHHHHHHHHHHHH
Confidence 99864 333432 4789999963 3444444444443
No 283
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.63 E-value=2.1e-13 Score=161.58 Aligned_cols=324 Identities=18% Similarity=0.181 Sum_probs=193.6
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCC--ceeeecCchHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIR 669 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~--~~~l~~~sGa~ge~a~llair 669 (1058)
..+|++.+.+..+...+. ....+.....+. .+...++.++|+++++.+ ...++.++|++++++++.++|
T Consensus 66 ~~lGh~~p~v~~Ai~~ql-~~~~~~~~~~~~--------~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr 136 (441)
T PRK05769 66 TNVGHAHPKVVKAVKEQA-EKFLHYSLTDFY--------YEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIAR 136 (441)
T ss_pred cccCCCCHHHHHHHHHHH-HhccCccCcccC--------CHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHH
Confidence 356777766665555552 221111100011 122447888999988521 234778899999988888888
Q ss_pred HHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCCc-------------EEEEEcCCCCCC-------------CCHHHHHH
Q 001531 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------------KIVSVGTDAKGN-------------INIEELRK 722 (1058)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G~-------------~vv~V~~d~~g~-------------iD~e~L~~ 722 (1058)
.|. +|++|+ ...++||....+....|. .+..++.....+ .+++.+++
T Consensus 137 ~~t------gr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~ 210 (441)
T PRK05769 137 YHT------GRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIED 210 (441)
T ss_pred HHh------CCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHH
Confidence 762 244555 467899987665443221 234444421100 12344666
Q ss_pred -HHHh--cCCCeEEEEEEcC-CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCc------cC--CcEE
Q 001531 723 -AAEA--NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY------IG--ADVC 787 (1058)
Q Consensus 723 -~i~~--~~~~taaV~vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~------~G--aDi~ 787 (1058)
.+++ +.+++++|+++.- +..|++.+ .+++|.++|++||+++++|+++. |+.+.|. +| +|++
T Consensus 211 ~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~t----G~gr~G~~~a~~~~gv~pDiv 286 (441)
T PRK05769 211 YLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQT----GMGRTGKMFAIEHFGVEPDII 286 (441)
T ss_pred HHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh----CCCcccceehhhccCCCCCEE
Confidence 3332 2467888877653 34577651 29999999999999999999854 4444443 23 5887
Q ss_pred EeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001531 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1058)
Q Consensus 788 ~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1058)
++ .|.+ ++ |-.+|.+++++++...+++.. +. ++.|+++.++++.+.|..+.+ +
T Consensus 287 t~--~K~l----~~-G~p~gav~~~~~i~~~~~~~~----------------~~---T~~g~p~~~aaa~a~L~~l~~-~ 339 (441)
T PRK05769 287 TL--AKAI----AG-GLPLGAVIGRAELMFLPPGSH----------------AN---TFGGNPVAAAAALATLEELEE-G 339 (441)
T ss_pred EE--cccc----cC-CcccEEEEEehhhhhcCCCCC----------------CC---CCCcCHHHHHHHHHHHHHHHH-H
Confidence 65 4766 33 345778888887765443110 11 123456666777777777754 4
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCccceEEEEecccc-cccCCCCHHHHHHHHHHCCccccCCCCCC
Q 001531 868 LTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGL-KNTAGIEPEDVAKRLMDYGFHGPTMSWPV 941 (1058)
Q Consensus 868 l~~~a~~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~~-~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~ 941 (1058)
+ .++...+.++|++.|++. ++++ +.|. |.. +-+.+..- +.........+.+.|.++|+.+....
T Consensus 340 ~---~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~-G~~---~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~~~--- 409 (441)
T PRK05769 340 L---LENAQKLGEYLRKELKELKEKYEFIGDVRGL-GLM---IGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLGAG--- 409 (441)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHhCCCeeeeecc-eEE---EEEEeccCCccccHHHHHHHHHHHHhCCcEEecCC---
Confidence 3 344556778888888764 3332 1221 222 12222110 00000123568888899999874322
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 942 PGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 942 ~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
.+.||++|+..+|++|||++++++.+++.+
T Consensus 410 ~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 410 KSAIRIIPPLIITEEEADIGLEILEEAIKE 439 (441)
T ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 368999999999999999999999998765
No 284
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.63 E-value=6.2e-14 Score=164.00 Aligned_cols=213 Identities=19% Similarity=0.178 Sum_probs=154.6
Q ss_pred HHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---h
Q 001531 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 289 (1058)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~---~ 289 (1058)
..++++.+|++.|.+. +.++.+|++++.+++.++. ++||+||++...|+++...++..++..|++++.++. +
T Consensus 66 ~~~le~~lA~l~g~~~--~i~~ssG~~Ai~~~l~all---~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~d~e 140 (398)
T PRK08249 66 VQAFEEKVRILEGAEA--ATAFSTGMAAISNTLYTFL---KPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCETGDHE 140 (398)
T ss_pred HHHHHHHHHHHhCCCe--EEEeCChHHHHHHHHHHhc---CCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCCCCHH
Confidence 4567899999999865 6788999988887776652 379999999999999988887667778999998775 4
Q ss_pred hhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCC
Q 001531 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1058)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1058)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|| +.++.+....|..+|+|++++|. |.++++ |
T Consensus 141 ~l~~~i~~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD-~t~a~~~~~~~l~~~~Divv~S~sK~l~g~---~ 216 (398)
T PRK08249 141 QIEAEIAKGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVD-NTFATPINQNPLALGADLVIHSATKFLSGH---A 216 (398)
T ss_pred HHHHhcCCCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEE-CCcCccccCCchhhCCCEEeccCceecCCC---C
Confidence 5656 7888999999988 78999999999999999999999994 45555555556678999999998 877643 2
Q ss_pred CCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHH
Q 001531 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1058)
Q Consensus 367 GP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~i 446 (1058)
.-.+|++..++++.+++.. .|+..+ . +.+.. .+. +...+.+-+...
T Consensus 217 ~~~gG~vv~~~~l~~~l~~-------------------------~~~~~g---~-~~s~~---~a~--l~l~~l~tL~~R 262 (398)
T PRK08249 217 DALGGVVCGSKELMEQVYH-------------------------YREING---A-TMDPM---SAY--LILRGMKTLKLR 262 (398)
T ss_pred CceEEEEECCHHHHHHHHH-------------------------HHHhcC---C-CCCHH---HHH--HHHhCcchHHHH
Confidence 1224777777666554410 011101 0 11111 111 234455566666
Q ss_pred HHHHHHHHHHHHHHHhcCCCeE
Q 001531 447 AQRVHGLAGTFALGLKKLGTVE 468 (1058)
Q Consensus 447 a~~~~~~a~~l~~~L~~~G~~~ 468 (1058)
.++..+++..+++.|++.+.++
T Consensus 263 ~~~~~~na~~la~~L~~~p~v~ 284 (398)
T PRK08249 263 VRQQQESAMALAKYLQTHPKVE 284 (398)
T ss_pred HHHHHHHHHHHHHHHHcCCCee
Confidence 6778899999999999875454
No 285
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.63 E-value=4e-14 Score=165.14 Aligned_cols=284 Identities=14% Similarity=0.144 Sum_probs=186.1
Q ss_pred HHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCCC
Q 001531 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1058)
Q Consensus 635 ~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g~ 714 (1058)
.++++.+++.+|++..++..++|++. ++.++++.+. .++++|+++.+.++.+...++..|++++.++.++++.
T Consensus 89 ~~lr~~ia~~~~~~~~~I~~t~Ga~~--~i~~~~~~~~-----~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~ 161 (380)
T PLN03026 89 RRLRAALAEDSGLESENILVGCGADE--LIDLLMRCVL-----DPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFS 161 (380)
T ss_pred HHHHHHHHHHhCcChhhEEEcCCHHH--HHHHHHHHhc-----CCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCC
Confidence 46889999999988766666777653 2333344331 2567899998866656566788999999999877788
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCC----CccCCcEEEe
Q 001531 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP----GYIGADVCHL 789 (1058)
Q Consensus 715 iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~p----g~~GaDi~~~ 789 (1058)
+|+++|++++. .+++++|++++|| .+|.+. +.+++.++++.. +++++|+++.. +.....+ ....-.|++.
T Consensus 162 ~d~~~l~~~~~--~~~~~~v~l~~P~NPTG~~~-~~~~l~~l~~~~-~~vi~DeaY~~-~~~~~~~~~~~~~~~~viv~~ 236 (380)
T PLN03026 162 LDVPRIVEAVE--THKPKLLFLTSPNNPDGSII-SDDDLLKILELP-ILVVLDEAYIE-FSTQESRMKWVKKYDNLIVLR 236 (380)
T ss_pred cCHHHHHHHHh--ccCCcEEEEeCCCCCCCCCC-CHHHHHHHHhcC-CEEEEECcchh-hcCCcchHHHHHhCCCEEEEe
Confidence 99999999984 2688999999995 799998 689999998765 89999998631 1110011 1122346778
Q ss_pred CCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHH
Q 001531 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1058)
Q Consensus 790 s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1058)
++.|.|++ .|.++|+++++++++..+-.. +...+++ ..++. ++.+.+. ..+-++
T Consensus 237 SfSK~~gl----aGlRiGy~~~~~~~i~~l~~~--------------~~~~~~~--~~~q~----aa~~aL~--~~~~~~ 290 (380)
T PLN03026 237 TFSKRAGL----AGLRVGYGAFPLSIIEYLWRA--------------KQPYNVS--VAAEV----AACAALS--NPKYLE 290 (380)
T ss_pred cchHhhcC----ccccceeeecCHHHHHHHHHh--------------cCCCCCC--HHHHH----HHHHHhh--CHHHHH
Confidence 88888864 478999999887665443100 0001121 11121 1222222 122244
Q ss_pred HHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCC-CCCCCEEEE
Q 001531 870 EASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-WPVPGTLMI 947 (1058)
Q Consensus 870 ~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~-~p~~~~Lri 947 (1058)
+..+...++.+++.+.|+++ +...++ .+.. -++++++ .+.+..++.+.|.++||.+.... .+..+.+||
T Consensus 291 ~~~~~~~~~r~~l~~~L~~~~~~~~~p--~~~~--f~~~~~~-----~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~lRi 361 (380)
T PLN03026 291 DVKNALVEERERLFGLLKEVPFLEPYP--SDAN--FILCRVT-----SGRDAKKLKEDLAKMGVMVRHYNSKELKGYIRV 361 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCeECC--CCCe--EEEEECC-----CCCCHHHHHHHHHHCCeEEEECCCCCCCCEEEE
Confidence 55556667788898999875 211222 1222 2455554 13567899999999999865322 234578999
Q ss_pred EcCCCCCHHHHHHHHHHHHHH
Q 001531 948 EPTESESKEELDRYCDALISI 968 (1058)
Q Consensus 948 s~te~~t~eeid~fi~aL~~i 968 (1058)
++. +.+++++|+++|+++
T Consensus 362 s~~---~~~~~~~l~~al~~~ 379 (380)
T PLN03026 362 SVG---KPEHTDALMEALKQL 379 (380)
T ss_pred ecC---CHHHHHHHHHHHHHh
Confidence 986 678999999999764
No 286
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.63 E-value=7.1e-14 Score=163.25 Aligned_cols=295 Identities=15% Similarity=0.147 Sum_probs=180.3
Q ss_pred hcHHHHHHHHHHHHHHHhCCC--ce-eeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEE
Q 001531 628 QGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1058)
Q Consensus 628 qG~~~~~~el~~~lael~G~~--~~-~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~v 704 (1058)
+|..++...+.+++.+..|.+ .. .+..++|++. +..++++.+. .+++.|+++++.+..+...++..|.++
T Consensus 69 ~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~--~i~~~~~~~~-----~~gd~Vl~~~P~y~~~~~~~~~~g~~~ 141 (385)
T PRK09276 69 EGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKE--GIAHIPLAFV-----NPGDVVLVPDPGYPVYKIGTIFAGGEP 141 (385)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHH--HHHHHHHHhC-----CCCCEEEEcCCCCcChHHHHHHcCCEE
Confidence 565566666666666655753 33 3555566542 2233344332 256889999987777777788999999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--ccHHHHHHHHHHcCCEEEEeccCccc-ccCcCC
Q 001531 705 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVGLTS 778 (1058)
Q Consensus 705 v~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~a-l~gl~~ 778 (1058)
+.++.+.+ ..+|++++++++. +++++|++++| |.+|.+- +.+++|+++|+++|+++++|+++... ..+...
T Consensus 142 ~~v~~~~~~g~~~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~ 218 (385)
T PRK09276 142 YFMPLKEENGFLPDLDAIPEDVA---KKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKP 218 (385)
T ss_pred EEEecCCCCCCcCCHHHHHHhcc---ccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCC
Confidence 99998654 4589999998886 68899999998 4788875 24799999999999999999986421 111111
Q ss_pred C------CccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHH
Q 001531 779 P------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1058)
Q Consensus 779 p------g~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~ 852 (1058)
+ ...+-.|.+.++.|.|+.| |.++|++++++++...+... + .....+. +...
T Consensus 219 ~~~~~~~~~~~~~i~~~S~SK~~g~~----GlRiG~~i~~~~l~~~~~~~------------~--~~~~~~~----~~~~ 276 (385)
T PRK09276 219 PSFLEVPGAKDVGIEFHSLSKTYNMT----GWRIGFAVGNADLIAGLGKV------------K--SNVDSGV----FQAI 276 (385)
T ss_pred CChhccCCCcCCEEEEecchhhcCCc----chhheeeeCCHHHHHHHHHH------------H--hhccCCC----CHHH
Confidence 1 1112346678888988543 67799999887665443110 0 0001111 1111
Q ss_pred HHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHH-HCC
Q 001531 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYG 931 (1058)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~-~~G 931 (1058)
..++..++. ...+.+++..+....+++++.+.|++. .+.+..+++.++ ++++++ .+.+..++.++|. ++|
T Consensus 277 q~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~--~~v~~~-----~~~~~~~l~~~ll~~~g 347 (385)
T PRK09276 277 QEAGIAALN-GPQEVVEELRKIYQERRDILVEGLRKL-GLEVEPPKATFY--VWAPVP-----KGYTSAEFATLLLDKAG 347 (385)
T ss_pred HHHHHHHHc-CcHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceE--EEEECC-----CCCCHHHHHHHHHHhCC
Confidence 111222222 123334555566667788899999875 222222223221 456654 2457889999987 579
Q ss_pred ccccC-CCCC--CCCEEEEEcCCCCCHHHHHHHHHHH
Q 001531 932 FHGPT-MSWP--VPGTLMIEPTESESKEELDRYCDAL 965 (1058)
Q Consensus 932 i~~~~-~~~p--~~~~Lris~te~~t~eeid~fi~aL 965 (1058)
+.+.. ..|. .++.+||++.. +++++...++.|
T Consensus 348 i~v~~g~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l 382 (385)
T PRK09276 348 VVVTPGNGFGEYGEGYFRIALTV--PDERIEEAVERI 382 (385)
T ss_pred EEECCchhhCCCCCCeEEEEeCC--CHHHHHHHHHHH
Confidence 98643 2232 24789999963 455555554444
No 287
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.62 E-value=1.2e-13 Score=162.21 Aligned_cols=307 Identities=14% Similarity=0.116 Sum_probs=177.9
Q ss_pred hcHHHHHHHHHHHHHHHhC-----CCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCc
Q 001531 628 QGYQEMFNNLGEWLCTITG-----FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 702 (1058)
Q Consensus 628 qG~~~~~~el~~~lael~G-----~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~ 702 (1058)
+|..++ ++.++++++ .+...+..++|++. +..++++.+. .++++|+++.+.+..+...++..|+
T Consensus 73 ~g~~~l----r~aia~~~~~~~~~~~~~~i~~t~G~~~--al~~~~~~l~-----~~gd~v~i~~P~y~~~~~~~~~~g~ 141 (401)
T TIGR01264 73 VGALSA----REAIASYYHNPDGPIEADDVVLCSGCSH--AIEMCIAALA-----NAGQNILVPRPGFPLYETLAESMGI 141 (401)
T ss_pred CCCHHH----HHHHHHHHhhcCCCCCHHHEEECcChHH--HHHHHHHHhC-----CCCCEEEEeCCCChhHHHHHHHcCC
Confidence 465444 444555544 33334544555442 3334444432 2467899988766666666888999
Q ss_pred EEEEEcCCC--CCCCCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCcc-cccCc
Q 001531 703 KIVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVGL 776 (1058)
Q Consensus 703 ~vv~V~~d~--~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~-al~gl 776 (1058)
+++.++++. ++.+|+++|+++++ +++++|++++|+ .+|.+. +++++|+++|+++|+++++|+++.. ...+-
T Consensus 142 ~v~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~ 218 (401)
T TIGR01264 142 EVKLYNLLPDKSWEIDLKQLESLID---EKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGA 218 (401)
T ss_pred EEEEeecCCccCCCCCHHHHHHHhc---cCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCc
Confidence 999998864 36799999999886 678889999995 788874 2699999999999999999998641 11110
Q ss_pred C-CC-CccCC--c-EEEeCCccccccCCCCCCCceeEEEEeCC--CCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhh
Q 001531 777 T-SP-GYIGA--D-VCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (1058)
Q Consensus 777 ~-~p-g~~Ga--D-i~~~s~hKtf~~P~g~GGPg~G~i~~~~~--l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~ 849 (1058)
. .+ ..+.. . |++.++.|+|+.| |-++|++.+.+. ....+-..+. .......+++ ...+
T Consensus 219 ~~~~~~~~~~~~~vi~~~SfSK~~~~~----GlRiG~iv~~~~~~~~~~~~~~~~---------~~~~~~~~~~--~~~q 283 (401)
T TIGR01264 219 TFEPLASLSSTVPILSCGGLAKRWLVP----GWRLGWIIIHDRRGILRDIRDGLV---------KLSQRILGPC--TIVQ 283 (401)
T ss_pred ccccHHHcCCCCcEEEEccCcccCCCc----cceEEEEEecCcchhHHHHHHHHH---------HHhhccCCCC--cHHH
Confidence 0 11 11111 2 5567788887644 788999998742 1110000000 0000001111 1122
Q ss_pred HHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHH-
Q 001531 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM- 928 (1058)
Q Consensus 850 ~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~- 928 (1058)
.. +..++....++-+++..+...++.+++.+.|++...+.+..+.+..+ ++++++........+..++.++|.
T Consensus 284 ~a----~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f--~~~~~~~~~~~~~~~~~~~~~~l~~ 357 (401)
T TIGR01264 284 GA----LPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSGAMY--MMVGIEMEHFPEFKNDVEFTERLVA 357 (401)
T ss_pred HH----HHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeeE--EEEEecccccCCCCCHHHHHHHHHH
Confidence 21 22333321233355555666677888888888742222212223222 455543100001235678888876
Q ss_pred HCCcccc-CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 929 DYGFHGP-TMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 929 ~~Gi~~~-~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
++||.+. ...|..++.+||++.. .+++++..++.|.+.+++
T Consensus 358 ~~gI~v~pg~~f~~~~~iRis~~~--~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 358 EQSVFCLPGSCFEYPGFFRVVLTV--PVVMMEEACSRIQEFCER 399 (401)
T ss_pred hCCEEEeCchhcCCCCeEEEEEcC--CHHHHHHHHHHHHHHHhc
Confidence 7899853 3334446899999974 467888888888776543
No 288
>PLN02242 methionine gamma-lyase
Probab=99.62 E-value=5.8e-14 Score=165.08 Aligned_cols=217 Identities=18% Similarity=0.156 Sum_probs=154.8
Q ss_pred HHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHh-hcCCCeEEEEeCc---
Q 001531 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITR-ADGFDIKVVVSDL--- 288 (1058)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~-a~~~gi~v~~v~~--- 288 (1058)
..++++.+|+++|.+. +.++.+|++++.++++++. ++||+||++...|+.+...+... .+..|+++++++.
T Consensus 78 ~~~LE~~lA~l~g~~~--~l~~~sG~~Ai~~al~al~---~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~ 152 (418)
T PLN02242 78 VLNLGRQMAALEGTEA--AYCTASGMSAISSVLLQLC---SSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDL 152 (418)
T ss_pred HHHHHHHHHHHhCCCe--EEEEccHHHHHHHHHHHHh---CCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCH
Confidence 4467789999999987 6688999999888887762 38999999999998887766432 3447999888765
Q ss_pred hhhhc-cCC-CEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccC
Q 001531 289 KDIDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMG 364 (1058)
Q Consensus 289 ~~l~~-l~~-~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~ 364 (1058)
+++++ +++ ++++|++.+| |++|.+.|+++|+++||++|++++|| +.++. +...+.++|+||+++|. |.|+++
T Consensus 153 e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livD-ea~~~-~~~~~~~~g~divv~S~SK~l~g~-- 228 (418)
T PLN02242 153 EAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVD-NTFAP-MVLSPARLGADVVVHSISKFISGG-- 228 (418)
T ss_pred HHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEE-CCCCc-cCCCHHHcCCcEEEEeCccccCCC--
Confidence 45555 777 4999999998 78999999999999999999999994 45543 23456778999999998 888643
Q ss_pred CCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHH
Q 001531 365 YGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 444 (1058)
Q Consensus 365 ~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~ 444 (1058)
|..-+|++++++++++.+... + +. + ....|. .+....|++ ...+..-+.
T Consensus 229 -g~~~gG~iv~~~~li~~l~~~--------------------~-~~-~----~~~~g~--~~~~~~A~l--~~~~l~tl~ 277 (418)
T PLN02242 229 -ADIIAGAVCGPAELVNSMMDL--------------------H-HG-A----LMLLGP--TMNPKVAFE--LSERLPHLS 277 (418)
T ss_pred -CCceEEEEEcCHHHHHHHHHH--------------------h-hh-h----hhccCC--CCCHHHHHH--HHcCCCcHH
Confidence 333358888887776554100 0 00 0 001110 111112222 334445566
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEc
Q 001531 445 TIAQRVHGLAGTFALGLKKLGTVEVQ 470 (1058)
Q Consensus 445 ~ia~~~~~~a~~l~~~L~~~G~~~l~ 470 (1058)
...++..+++.++++.|++.| +++.
T Consensus 278 ~r~~~~~~~a~~la~~L~~~~-~~V~ 302 (418)
T PLN02242 278 LRMKEHCRRAMEYAKRMKELG-LKVI 302 (418)
T ss_pred HHHHHHHHHHHHHHHHHHhCC-CEEE
Confidence 667788999999999999997 7775
No 289
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.62 E-value=2.3e-14 Score=167.45 Aligned_cols=279 Identities=19% Similarity=0.184 Sum_probs=176.2
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCcc-HH---HHHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTN-PA---TAAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~-pa---~a~~~G~~vv~V~~ 709 (1058)
..++++.++++.|.+.. +..++|..+.. +++. +. +++++||++...|+.+ .. .+...|++++.++.
T Consensus 56 ~~~le~~lA~l~g~~~~-v~~~sG~~ai~---~~l~-~l-----~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 125 (390)
T PRK08064 56 REALEDIIAELEGGTKG-FAFASGMAAIS---TAFL-LL-----SKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDM 125 (390)
T ss_pred HHHHHHHHHHHhCCCCe-EEECCHHHHHH---HHHH-Hh-----CCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECC
Confidence 55788999999998854 55577765443 2232 11 2467899988777633 22 24568999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++... ....|.++|+|+++
T Consensus 126 -----~d~~~l~~~l~---~~tklV~l~~p~NptG~~~-dl~~I~~la~~~g~~vvvD~a~~~~--~~~~~~~~g~Divv 194 (390)
T PRK08064 126 -----TNLEEVAQNIK---PNTKLFYVETPSNPLLKVT-DIRGVVKLAKAIGCLTFVDNTFLTP--LLQKPLDLGADVVL 194 (390)
T ss_pred -----CCHHHHHHhcC---CCceEEEEECCCCCCcEec-cHHHHHHHHHHcCCEEEEECCCCcc--cccCchhhCCcEEE
Confidence 37899999996 789999999995 789987 8999999999999999999986432 23456678999999
Q ss_pred eCCccccccCCCCCCCceeEEEEeC-CCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001531 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~G~i~~~~-~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1058)
.++||+|+.| +|-..|++++++ ++.+.+.... ...+...+ + ..+| +...|-+-
T Consensus 195 ~S~tK~~~G~---~~~laG~~v~~~~~~~~~l~~~~-------------~~~g~~~~-~-------~~a~--l~~~gl~t 248 (390)
T PRK08064 195 HSATKFLAGH---SDVLAGLAVVKDEELAQKLYFLQ-------------NSFGAVLG-V-------QDCW--LVLRGLKT 248 (390)
T ss_pred eecceeccCC---ccceeEEEEeCCHHHHHHHHHHH-------------HhcCCCCC-H-------HHHH--HHHcccCc
Confidence 9999998522 111257777763 4443321000 00011111 1 1123 33344444
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCeeeccCCC-c-----------cceEEEEecccccccCCCCHHHHHHHHHHCCc
Q 001531 868 LTEASKIAILNANYMAKRLEKH---YPILFRGVNG-T-----------VAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 932 (1058)
Q Consensus 868 l~~~a~~~~~~a~yL~~~L~~~---~~v~~~g~~~-~-----------~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi 932 (1058)
+..+.++...++..+++.|+++ ..+.|++-.+ + +...+.|++. +.+++.+.+...++
T Consensus 249 l~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~--------~~~~~~~f~~~l~l 320 (390)
T PRK08064 249 LHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQ--------SEEAVRQFVSHVKL 320 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEEC--------CHHHHHHHHHhCCc
Confidence 5567778888999999999875 3445554211 0 1111223332 23344444444454
Q ss_pred c-----ccC----------CC---CC--------C-CCEEEEEcCCCCCHHHHHHHHHHHHH
Q 001531 933 H-----GPT----------MS---WP--------V-PGTLMIEPTESESKEELDRYCDALIS 967 (1058)
Q Consensus 933 ~-----~~~----------~~---~p--------~-~~~Lris~te~~t~eeid~fi~aL~~ 967 (1058)
. .++ +. .| + ++.+|+|+...++++.|+.|.++|.+
T Consensus 321 ~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~ 382 (390)
T PRK08064 321 PVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSY 382 (390)
T ss_pred ceEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHh
Confidence 2 110 00 11 2 47899999988777777777777765
No 290
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.62 E-value=1.2e-13 Score=162.50 Aligned_cols=296 Identities=20% Similarity=0.235 Sum_probs=183.8
Q ss_pred HHHHHHHHHHHHHHhCCCc-eeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEc-CCCCCccHHHHHhCC-------
Q 001531 631 QEMFNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIP-VSAHGTNPATAAMCG------- 701 (1058)
Q Consensus 631 ~~~~~el~~~lael~G~~~-~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip-~saHg~~pa~a~~~G------- 701 (1058)
.+...++.+.+++++|.+. ..+..++|+++.++++.+++.+ .++++|++. .++||.........+
T Consensus 78 ~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~al~~~~~~------~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 151 (413)
T cd00610 78 NEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAALKLARAY------TGRKKIISFEGAYHGRTLGALSLTGSKKYRGG 151 (413)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHH------cCCCeEEEECCCcCCccHHHHHhcCCcccccc
Confidence 3456789999999998432 2356788888887666666544 135667664 478887665544322
Q ss_pred -----cEEEEEcCCCC------CCCCHHHHHHHHHhcCCCeEEEEEEcCC-Ccccccc---cHHHHHHHHHHcCCEEEEe
Q 001531 702 -----MKIVSVGTDAK------GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE---GIDEICKIIHDNGGQVYMD 766 (1058)
Q Consensus 702 -----~~vv~V~~d~~------g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~---dI~eI~~lah~~g~lv~vD 766 (1058)
.+++.+|.+.. ...|+++|+++++++.+++++|+++..+ ..|.+.+ .+++|.++|+++|+++++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~D 231 (413)
T cd00610 152 FGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIAD 231 (413)
T ss_pred CCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 34667776532 2348999999998554567777665543 4587641 2999999999999999999
Q ss_pred ccCcccccCcCCCC------cc--CCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCC
Q 001531 767 GANMNAQVGLTSPG------YI--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQP 838 (1058)
Q Consensus 767 ~a~~~al~gl~~pg------~~--GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~ 838 (1058)
+++. ++.+.| .+ .+|++++ .|+|+ + |.++|++++++++.+.++...+ ..
T Consensus 232 ev~~----g~g~~g~~~~~~~~~~~~d~~t~--sK~l~----~-g~~~g~~~~~~~~~~~~~~~~~------------~~ 288 (413)
T cd00610 232 EVQT----GFGRTGKMFAFEHFGVEPDIVTL--GKGLG----G-GLPLGAVLGREEIMDAFPAGPG------------LH 288 (413)
T ss_pred cccc----CCCcCcchhhHhhcCCCCCeEEE--ccccc----C-ccccEEEEEcHHHHHhhccCCC------------CC
Confidence 9864 222222 12 3577654 48874 2 4568888888877665411100 00
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCeeec-cCCCccceEEEEecccccc
Q 001531 839 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFR-GVNGTVAHEFIVDLRGLKN 914 (1058)
Q Consensus 839 t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~---~~v~~~-g~~~~~~~e~vv~~~~~~~ 914 (1058)
....+ ++...++++.+.+..+..+. ..++...+.++++++|++. +++... ...+.+ +.+.+..-..
T Consensus 289 ~~t~~----~~~~~~~a~~a~l~~l~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~ 358 (413)
T cd00610 289 GGTFG----GNPLACAAALAVLEVLEEEG---LLENAAELGEYLRERLRELAEKHPLVGDVRGRGLM---IGIELVKDRA 358 (413)
T ss_pred CCCCC----cCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceE---EEEEEecCCC
Confidence 01112 23344445556666665433 3445556778888888764 132211 111222 3333321000
Q ss_pred ---cCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001531 915 ---TAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 968 (1058)
Q Consensus 915 ---~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i 968 (1058)
........+.+.|.++|+.+.... .+.+|++++..+|++||++++++|+++
T Consensus 359 ~~~~~~~~~~~~~~~l~~~gv~v~~~~---~~~lR~~~~~~~t~~~i~~~~~~l~~~ 412 (413)
T cd00610 359 TKPPDKELAAKIIKAALERGLLLRPSG---GNVIRLLPPLIITEEEIDEGLDALDEA 412 (413)
T ss_pred cCCcchHHHHHHHHHHHHCCeEEeecC---CCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 000245789999999999875332 478999999999999999999999875
No 291
>PRK07481 hypothetical protein; Provisional
Probab=99.62 E-value=1.4e-13 Score=163.45 Aligned_cols=340 Identities=17% Similarity=0.185 Sum_probs=204.5
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhC---CCceeeecCchHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG---FDSFSLQPNAGAAGEYAGLMVI 668 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G---~~~~~l~~~sGa~ge~a~llai 668 (1058)
..+|++.+.+..++..+. ....+.. ++. .-..+...++.+.|+++++ ++. .++.++|++++++++.++
T Consensus 54 ~~lGh~~p~v~~Ai~~ql-~~~~~~~--~~~-----~~~~~~~~~lae~L~~~~~~~~~~~-v~f~~sGsEAve~AlklA 124 (449)
T PRK07481 54 VNVGHNREEVKEAIVRQL-DELEYYS--TFD-----GTTHPRAIELSYELIDMFAPEGMRR-VFFSSGGSDSVETALKLA 124 (449)
T ss_pred hcCCCCCHHHHHHHHHHH-Hhcccee--ccc-----ccCCHHHHHHHHHHHHhcCCCCCCE-EEEcCchHHHHHHHHHHH
Confidence 468888888777666652 2211111 100 0001234578888999884 333 467889999999999999
Q ss_pred HHHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCCc------------EEEEEcCCCC-----CCCCHHH--------HHH
Q 001531 669 RAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAK-----GNINIEE--------LRK 722 (1058)
Q Consensus 669 r~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G~------------~vv~V~~d~~-----g~iD~e~--------L~~ 722 (1058)
|.|...+|..+|++|+ +..++||....+....|- .+..++.... +..|+++ +++
T Consensus 125 r~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~ 204 (449)
T PRK07481 125 RQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLER 204 (449)
T ss_pred HHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHH
Confidence 9987666654566665 567899976554322111 1233332110 1124444 344
Q ss_pred HHH-hcCCCeEEEEEEcC-CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc--------CCcEEEe
Q 001531 723 AAE-ANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHL 789 (1058)
Q Consensus 723 ~i~-~~~~~taaV~vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~--------GaDi~~~ 789 (1058)
.+. ++.+++++|+++.- ...|++.+ .++++.++|++||+++|+|++ +.|+.+.|.+ -+||+++
T Consensus 205 ~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV----~tGfGRtG~~~a~~~~gv~PDiv~~ 280 (449)
T PRK07481 205 EIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEV----VTGFGRTGSWFGSRGWGVKPDIMCL 280 (449)
T ss_pred HHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeeh----hhCcCcCchhhHhhhcCCCCCEEEE
Confidence 443 33478999988864 34566542 389999999999999999998 4566666532 3688887
Q ss_pred CCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHH
Q 001531 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1058)
Q Consensus 790 s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1058)
.|.++ +|--.+|.+++++++++.+..... .... ....+++.|+++.++++.+.|..+.++++.
T Consensus 281 --gKgl~----gG~~Pi~av~~~~~i~~~~~~~~~----------~~~~-~~h~~T~~gnpl~~aaa~a~L~~l~~~~l~ 343 (449)
T PRK07481 281 --AKGIT----SGYVPLGATMVNARIADAFEANAD----------FGGA-IMHGYTYSGHPVACAAALATLDIVVREDLP 343 (449)
T ss_pred --eeccc----CCCcCceEEEEcHHHHHHHhccCc----------cccc-cccCCCCCCCHHHHHHHHHHHHHHHhhhHH
Confidence 47663 332236777778766554421100 0000 011112456778888888888888776654
Q ss_pred HHHHHHHHHHHHHHHHHhcc---CCee--eccCCCccceEEEEeccccc-ccCCC-----CHHHHHHHHHHCCccccCCC
Q 001531 870 EASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLK-NTAGI-----EPEDVAKRLMDYGFHGPTMS 938 (1058)
Q Consensus 870 ~~a~~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~~~-~~~g~-----~~~~v~k~L~~~Gi~~~~~~ 938 (1058)
+. ..+..++|.++|+++ ++++ +.|. |. +. -+++..-. ..... ....+.++|.++|+.+...
T Consensus 344 ~~---~~~~g~~l~~~L~~l~~~~~~i~~vrG~-Gl-m~--gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~- 415 (449)
T PRK07481 344 AN---AAKRGAYLLEGLQPLKERFELVGDVRGK-GL-ML--ALDLVADKATREPIDPSKGYANAVADVARENGVLVRPS- 415 (449)
T ss_pred HH---HHHHHHHHHHHHHHHhhcCCCeEEEeec-ce-EE--EEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEec-
Confidence 43 345567788888764 3322 2232 32 21 22221000 00001 1356888889999987532
Q ss_pred CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 939 WPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 939 ~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
.+.++|+|....|++|||.++++|.+++.++
T Consensus 416 ---g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 416 ---GTKIILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred ---CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 3568999999999999999999999988664
No 292
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.62 E-value=5.1e-14 Score=164.99 Aligned_cols=212 Identities=20% Similarity=0.200 Sum_probs=156.8
Q ss_pred HHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---h
Q 001531 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---D 290 (1058)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~---~ 290 (1058)
.++++.+|++.|.+ ++.++.+|++++.++++++ . ++||+||++...|+.+...+...++..|+++++++.. +
T Consensus 73 ~~le~~lA~l~g~~--~al~~~sG~~Ai~~~l~al-l--~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~d~~~ 147 (403)
T PRK07810 73 SMFEERLRLIEGAE--ACFATASGMSAVFTALGAL-L--GAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGEDLSQ 147 (403)
T ss_pred HHHHHHHHHHhCCC--cEEEECChHHHHHHHHHHH-h--CCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCCCHHH
Confidence 45778999999977 4889999999998887776 2 3799999999999888777766677789999998764 4
Q ss_pred hhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCCC
Q 001531 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1058)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~GG 367 (1058)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|| +.++.+....|.++|+||++.|+ |.|+++ |.
T Consensus 148 l~~ai~~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD-~a~a~~~~~~~~~~gaDivv~S~tK~l~g~---g~ 223 (403)
T PRK07810 148 WEEALSVPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLD-NVFATPLLQRGLPLGADVVVYSGTKHIDGQ---GR 223 (403)
T ss_pred HHHhcCcCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCCCccccCChhhcCCcEEEccCCceecCC---cC
Confidence 555 7889999999998 68999999999999999999999994 56677766667789999999998 877532 32
Q ss_pred CceEEEEEehhhhhc-CCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHH
Q 001531 368 PHAAFLATSQEYKRM-MPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1058)
Q Consensus 368 P~~G~l~~~~~~~~~-lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~i 446 (1058)
.-+|+++++++.+.. +- ..++..|. | +....|+ +...+-+-+..+
T Consensus 224 ~~gG~v~~~~~~~~~~l~-------------------------~~~~~~g~---~----~s~~~a~--l~l~~L~tl~~R 269 (403)
T PRK07810 224 VLGGAILGDREYIDGPVQ-------------------------KLMRHTGP---A----LSAFNAW--VLLKGLETLALR 269 (403)
T ss_pred ceeEEEEeChHHHHHHHH-------------------------HHHHHhCC---C----CCHHHHH--HHHhccCcHHHH
Confidence 235888887664421 10 00011111 0 1111222 244555667777
Q ss_pred HHHHHHHHHHHHHHHhcCCCeE
Q 001531 447 AQRVHGLAGTFALGLKKLGTVE 468 (1058)
Q Consensus 447 a~~~~~~a~~l~~~L~~~G~~~ 468 (1058)
.++..+++.++++.|++.++++
T Consensus 270 ~~~~~~~a~~~a~~L~~~p~v~ 291 (403)
T PRK07810 270 VRHSNASALRIAEFLEGHPAVR 291 (403)
T ss_pred HHHHHHHHHHHHHHHhcCCCcc
Confidence 7888899999999999875454
No 293
>PLN02509 cystathionine beta-lyase
Probab=99.62 E-value=4.5e-14 Score=167.01 Aligned_cols=212 Identities=18% Similarity=0.183 Sum_probs=151.1
Q ss_pred HHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---h
Q 001531 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 289 (1058)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~---~ 289 (1058)
..++++.+|++.|.+. +.++.+|++++.+++ ++ . ++||+||+++..|+.+...++......|++++.++. +
T Consensus 135 ~~aLE~~lA~leg~e~--ai~~~SG~aAi~~il-~l-l--~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~d~e 208 (464)
T PLN02509 135 RDALESLLAKLDKADR--AFCFTSGMAALSAVT-HL-I--KNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTNLD 208 (464)
T ss_pred HHHHHHHHHHHhCCCE--EEEeCcHHHHHHHHH-HH-h--CCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCCCHH
Confidence 4567789999999765 667888887765443 33 2 389999999999999988776656678999998765 4
Q ss_pred hhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCC
Q 001531 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1058)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1058)
++++ ++++|++|++.+| |++|.+.|+++|+++||++|++++|| +.++.+.+..|.++|+|++++|. |.+++| |
T Consensus 209 ~l~~ai~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD-~A~a~~~~~~pl~~gaDivv~S~tK~l~G~---g 284 (464)
T PLN02509 209 EVAAAIGPQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVD-NSIMSPVLSRPLELGADIVMHSATKFIAGH---S 284 (464)
T ss_pred HHHHhCCcCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEE-CCccccccCChhhcCCcEEEecCcccccCC---C
Confidence 4555 7889999999998 78999999999999999999999994 56677777777889999999998 887654 3
Q ss_pred CCceEEEEEehhh-hhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHH
Q 001531 367 GPHAAFLATSQEY-KRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1058)
Q Consensus 367 GP~~G~l~~~~~~-~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ 445 (1058)
+..+|+++++++. .+.+ ...++..++ .+....| |+...+-+-|..
T Consensus 285 dv~gG~v~~~~~~l~~~~-------------------------~~~~~~~g~-------~l~p~~A--~l~lr~L~tL~~ 330 (464)
T PLN02509 285 DVMAGVLAVKGEKLAKEV-------------------------YFLQNSEGS-------GLAPFDC--WLCLRGIKTMAL 330 (464)
T ss_pred ccceeEEEeccHHHHHHH-------------------------HHHHHhcCC-------CcCHHHH--HHHHhhhhhHHH
Confidence 3446888876542 2211 000111111 0111112 123334444555
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeE
Q 001531 446 IAQRVHGLAGTFALGLKKLGTVE 468 (1058)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~G~~~ 468 (1058)
+.++..+++.++++.|++.+.++
T Consensus 331 R~~r~~~nA~~la~~L~~~p~V~ 353 (464)
T PLN02509 331 RIEKQQENARKIAMYLSSHPRVK 353 (464)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcc
Confidence 66777899999999999875453
No 294
>PRK09148 aminotransferase; Validated
Probab=99.62 E-value=1.1e-13 Score=162.98 Aligned_cols=310 Identities=12% Similarity=0.079 Sum_probs=186.6
Q ss_pred hhcHHHHHHHHHHHHHHHhCCC--ce-eeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcE
Q 001531 627 AQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1058)
Q Consensus 627 ~qG~~~~~~el~~~lael~G~~--~~-~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~ 703 (1058)
.+|..++...+.+++.+.+|.+ .. .+..++|++. ++.++++.+. .+++.|+++++.+..+...+...|.+
T Consensus 67 ~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~--al~~~~~~l~-----~~gd~Vl~~~P~y~~~~~~~~~~g~~ 139 (405)
T PRK09148 67 SKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKE--GFANMAQAIT-----APGDVILCPNPSYPIHAFGFIMAGGV 139 (405)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHH--HHHHHHHHhc-----CCCCEEEEcCCCCcccHHHHHhcCCE
Confidence 3577677767777776666754 33 4566666553 2333344332 25678999998777776777889999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCccc-ccC--cC
Q 001531 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG--LT 777 (1058)
Q Consensus 704 vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~a-l~g--l~ 777 (1058)
++.++.+.++. ++++++++++++.+++.+|++++|| .+|.+- +.+++|+++|+++|+++++|+++..- ..+ ..
T Consensus 140 v~~v~~~~~~~-~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~ 218 (405)
T PRK09148 140 IRSVPAEPDEE-FFPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPP 218 (405)
T ss_pred EEEEeCCCCCC-CccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCC
Confidence 99999876542 4566777776555789999999984 789886 23688999999999999999987421 111 11
Q ss_pred CCCcc----CCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHH
Q 001531 778 SPGYI----GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (1058)
Q Consensus 778 ~pg~~----GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~ 853 (1058)
....+ +..|++.+++|+|+.| |.++|++++++++...+-. . +...+.+.+...+.
T Consensus 219 s~~~~~~~~~~~i~~~SfSK~~~~p----GlR~G~~v~~~~~i~~l~~-~-------------~~~~~~~~~~~~q~--- 277 (405)
T PRK09148 219 SVLQVPGAKDVTVEFTSMSKTFSMA----GWRMGFAVGNERLIAALTR-V-------------KSYLDYGAFTPIQV--- 277 (405)
T ss_pred ChhhCCCccCcEEEEeccccccCCc----chheeeeeCCHHHHHHHHH-H-------------HHHhccCCChHHHH---
Confidence 11111 2235578889988655 6789999987766544310 0 00001111111121
Q ss_pred HHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHH-HCCc
Q 001531 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGF 932 (1058)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~-~~Gi 932 (1058)
++...+. -+.+-+++..+...++.+++.+.|++. .+.+..+++..+ ++++++... .+.+..++.+.|. ++|+
T Consensus 278 -~~~~~L~-~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~f--~~~~l~~~~--~~~~~~~~~~~ll~~~gV 350 (405)
T PRK09148 278 -AATAALN-GPQDCIAEMRELYKKRRDVLVESFGRA-GWDIPPPAASMF--AWAPIPEAF--RHLGSLEFSKLLVEKADV 350 (405)
T ss_pred -HHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHc-CCccCCCCeeEE--EEEECCCcc--CCCCHHHHHHHHHHhCCE
Confidence 1122222 123334555566667888888999874 222222223222 456654210 1234578888876 6899
Q ss_pred ccc-CCCCCC--CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001531 933 HGP-TMSWPV--PGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1058)
Q Consensus 933 ~~~-~~~~p~--~~~Lris~te~~t~eeid~fi~aL~~i~~e~~~ 974 (1058)
.+. ...|+. ++.+||++. .+.++++..++.|.+++....+
T Consensus 351 ~v~pg~~f~~~~~~~~Ri~~~--~~~~~l~~al~~l~~~l~~~~~ 393 (405)
T PRK09148 351 AVAPGVGFGEHGDGYVRIALV--ENEQRIRQAARNIKRFLSSADE 393 (405)
T ss_pred EEeCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHHHH
Confidence 753 333432 478999986 3466666666666665554443
No 295
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.62 E-value=1.9e-13 Score=161.84 Aligned_cols=315 Identities=16% Similarity=0.127 Sum_probs=181.4
Q ss_pred hhcHHHHHHHHHHHHHHHhCCC--ceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEE
Q 001531 627 AQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1058)
Q Consensus 627 ~qG~~~~~~el~~~lael~G~~--~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~v 704 (1058)
.+|..++...+.+++..-.|.+ ...+..++|++. ++.++++.+. .++++|+++++.+..+...+.+.|+++
T Consensus 93 ~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~--al~l~~~~l~-----~~Gd~Vlv~~P~y~~y~~~~~~~g~~~ 165 (430)
T PLN00145 93 CVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQ--AIEIIMSVLA-----QPGANILLPRPGYPLYEARAVFSGLEV 165 (430)
T ss_pred CccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHH--HHHHHHHHhc-----CCCCEEEEcCCCCccHHHHHHHcCCEE
Confidence 3565555544444444433433 334444555432 2334444432 256789999887766666788899999
Q ss_pred EEEcCCC--CCCCCHHHHHHHHHhcCCCeEEEEEEcCC-Ccccccc--cHHHHHHHHHHcCCEEEEeccCcc-cccC--c
Q 001531 705 VSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMN-AQVG--L 776 (1058)
Q Consensus 705 v~V~~d~--~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~--dI~eI~~lah~~g~lv~vD~a~~~-al~g--l 776 (1058)
+.+++++ ++.+|+++|+++++ ++++++++++|| .+|.+.+ ++++|+++|+++|+++++|+++.. .+.+ +
T Consensus 166 ~~~~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~ 242 (430)
T PLN00145 166 RHFDLLPERGWEVDLEGVEALAD---ENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPF 242 (430)
T ss_pred EEeeCCcccCCcCCHHHHHHHhC---cCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCc
Confidence 9998743 36799999999886 789999999995 6898862 589999999999999999998642 1111 1
Q ss_pred CCCCccC---CcEEEeCCccccccCCCCCCCceeEEEEe--CCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHH
Q 001531 777 TSPGYIG---ADVCHLNLHKTFCIPHGGGGPGMGPIGVK--KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1058)
Q Consensus 777 ~~pg~~G---aDi~~~s~hKtf~~P~g~GGPg~G~i~~~--~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~ 851 (1058)
...+.++ .=|++.++.|+|++| |.++|++++. +.+.... .++... ........+++...|..
T Consensus 243 ~~~~~~~~~~~vi~~~S~SK~~~~p----G~RlG~iv~~~~~~~~~~~--~~~~~~-------~~~~~~~~~~~~~~Q~a 309 (430)
T PLN00145 243 VPMGVFGEVAPVLTLGSISKRWVVP----GWRLGWIATCDPNGILKET--KVVDSI-------RNYLNISTDPATFVQGA 309 (430)
T ss_pred cchhhhcccCcEEEEeccccccCCC----CeeEEEEEEecchhhhhhh--HHHHHH-------HHHhcccCCCCHHHHHH
Confidence 1111221 115567788888765 8999999974 2222110 000000 00000111211112211
Q ss_pred HHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCee-eccCCCccceEEEEecccccccCCC-CHHHHHHHHH-
Q 001531 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPIL-FRGVNGTVAHEFIVDLRGLKNTAGI-EPEDVAKRLM- 928 (1058)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~-~~g~~~~~~~e~vv~~~~~~~~~g~-~~~~v~k~L~- 928 (1058)
+..++..-..+-+++..+....+++++.+.|+++..+. ...|++.++ ++++++.-.. .+. +..+++.+|.
T Consensus 310 ----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y--~~v~l~~~~~-~~~~~~~~~~~~ll~ 382 (430)
T PLN00145 310 ----IPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMF--VMVKLDLSCL-SGIKDDMDFCCKLAK 382 (430)
T ss_pred ----HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeE--EEeccChhhc-CCCCCHHHHHHHHHH
Confidence 11222211123355566666677888999998752221 112334332 4455431000 012 4566776665
Q ss_pred HCCccc-cCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001531 929 DYGFHG-PTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1058)
Q Consensus 929 ~~Gi~~-~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~ 973 (1058)
++|+.+ +...|..++.+||+++. +.++++..++.|.+.+...+
T Consensus 383 ~~gV~v~pG~~fg~~~~lRis~~~--~~~~l~~al~rl~~~~~~~~ 426 (430)
T PLN00145 383 EESVVVLPGSALGMKNWLRITFAI--DPPSLEDGLERLKSFCLRHA 426 (430)
T ss_pred hCCEEEeCccccCCCCeEEEEeCC--CHHHHHHHHHHHHHHHHHhc
Confidence 678874 43445556899999983 46667777766666655543
No 296
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.62 E-value=2.4e-13 Score=159.66 Aligned_cols=292 Identities=16% Similarity=0.235 Sum_probs=186.0
Q ss_pred HHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHH-cCC-CCCCEEE-EcCCCCCccHHHHHhCCcE------
Q 001531 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKA-RGD-HHRNVCI-IPVSAHGTNPATAAMCGMK------ 703 (1058)
Q Consensus 633 ~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~-~G~-~~r~~Vl-ip~saHg~~pa~a~~~G~~------ 703 (1058)
...++++.++++.|++.+ +..+||+.++++++..++.++.. +|. ..+++|+ +....||.........+-.
T Consensus 74 ~~~~~~~~l~~~~~~~~~-~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~ 152 (400)
T PTZ00125 74 VLGLAEKYITDLFGYDKV-LPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNF 152 (400)
T ss_pred HHHHHHHHHHhCCCCCEE-EEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccC
Confidence 466888999999988754 56788999888888877765422 221 1234555 5667888766554433221
Q ss_pred ------EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccc---HHHHHHHHHHcCCEEEEeccCcccc
Q 001531 704 ------IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQ 773 (1058)
Q Consensus 704 ------vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~d---I~eI~~lah~~g~lv~vD~a~~~al 773 (1058)
++.++. .|+++|+++++ .+++++|+++.+ |.+|.+.++ +++|.++|++||+++++|+++. ++
T Consensus 153 ~~~~~~~~~~~~-----~d~~~le~~l~--~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~-g~ 224 (400)
T PTZ00125 153 GPFVPGFELVDY-----NDVEALEKLLQ--DPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQT-GL 224 (400)
T ss_pred CCCCCCceEeCC-----CCHHHHHHHhC--CCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CC
Confidence 122222 48999999995 367999988766 567887632 9999999999999999999863 22
Q ss_pred cCcCCCC------cc--CCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCcc
Q 001531 774 VGLTSPG------YI--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAA 845 (1058)
Q Consensus 774 ~gl~~pg------~~--GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa 845 (1058)
.+.| .+ ..|++++ .|+|+ +|++++|++++++++.+.+..... . ....
T Consensus 225 ---g~~G~~~~~~~~~~~pd~~~~--sK~l~----~g~~~ig~v~~~~~~~~~~~~~~~------------~--~t~~-- 279 (400)
T PTZ00125 225 ---GRTGKLLAHDHEGVKPDIVLL--GKALS----GGLYPISAVLANDDVMLVIKPGEH------------G--STYG-- 279 (400)
T ss_pred ---CccchhhHHHhcCCCCCEEEE--ccccc----CCCcCcEEEEEcHHHHhhccCCCC------------C--CCCC--
Confidence 2221 12 3588876 48874 455579999999877665431100 0 0111
Q ss_pred chhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCccceEEEEecccccccCCCCH
Q 001531 846 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEP 920 (1058)
Q Consensus 846 ~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~~~~~~g~~~ 920 (1058)
+++..++++.+.+..+..+++.+. ...+.++++++|++. .... ..+ .+.+ +.+.++. ..+.+.
T Consensus 280 --~~~~~~~aa~~~l~~i~~~~~~~~---~~~~~~~l~~~l~~l~~~~~~~~~~~~-~g~~---~~v~~~~---~~~~~~ 347 (400)
T PTZ00125 280 --GNPLACAVAVEALEVLKEEKLAEN---AQRLGEVFRDGLKELLKKSPWVKEIRG-KGLL---NAIVFDH---SDGVNA 347 (400)
T ss_pred --cCHHHHHHHHHHHHHHHhcCHHHH---HHHHHHHHHHHHHHHHhcCCCeEEEec-ccEE---EEEEEcc---CcchHH
Confidence 223334444555666554555433 334567777777664 1221 112 2222 2233321 012456
Q ss_pred HHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001531 921 EDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1058)
Q Consensus 921 ~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~ 973 (1058)
.++.++|.++|+.+.... .+.+||+|+...+++||+++++.|.+++.++.
T Consensus 348 ~~~~~~l~~~Gv~v~~~~---~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~~~ 397 (400)
T PTZ00125 348 WDLCLKLKENGLLAKPTH---DNIIRFAPPLVITKEQLDQALEIIKKVLKSFD 397 (400)
T ss_pred HHHHHHHHHCCeEEeecC---CCEEEEECCccCCHHHHHHHHHHHHHHHHHHh
Confidence 789999999998864322 47899999988999999999999999887654
No 297
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.62 E-value=3.3e-14 Score=166.17 Aligned_cols=212 Identities=20% Similarity=0.106 Sum_probs=156.2
Q ss_pred HHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---hh
Q 001531 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1058)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~---~~ 290 (1058)
.++++.+|++.|.+ ++.++.+||+++.++++++ . ++||+||++...|+.+...+...++..|++++.++. ++
T Consensus 68 ~~Le~~lA~l~g~~--~~l~~~sgt~Ai~~~l~al-~--~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~~~~~ 142 (394)
T PRK07050 68 LALAQRLAEIEGGR--HALLQPSGLAAISLVYFGL-V--KAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPLIGAG 142 (394)
T ss_pred HHHHHHHHHHhCCC--eEEEeccHHHHHHHHHHHH-h--CCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCCCHHH
Confidence 45778999999976 4888899999999888777 3 389999999999999887776556778999999876 45
Q ss_pred hhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCCC
Q 001531 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1058)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~GG 367 (1058)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++|+++++| +.++.+....|.++|+||++.|. |.+++. |+
T Consensus 143 l~~~i~~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD-~a~a~~~~~~~l~~GaDi~v~S~tK~~~g~---~~ 218 (394)
T PRK07050 143 IADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAID-NTYSAGLAFKPFEHGVDISVQALTKYQSGG---SD 218 (394)
T ss_pred HHHhcCCCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEE-CCcccccccCHHHcCCeEEEEECCceecCC---CC
Confidence 666 7889999999998 68899999999999999999999994 56677777778889999999998 888532 22
Q ss_pred CceEEEEE-ehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHH
Q 001531 368 PHAAFLAT-SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1058)
Q Consensus 368 P~~G~l~~-~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~i 446 (1058)
.-+|.+.+ ++++.+++- ..|..-|. |. .+. ..|+...|-+.+...
T Consensus 219 ~~gG~v~~~~~~~~~~~~-------------------------~~~~~~G~---~~-~~~-----~a~l~lr~l~tl~~R 264 (394)
T PRK07050 219 VLMGATITADAELHAKLK-------------------------LARMRLGI---GV-SAD-----DCSLVLRGLPSLQVR 264 (394)
T ss_pred eeEEEEEECCHHHHHHHH-------------------------HHHHhcCC---CC-CHH-----HHHHHHcCCCcHHHH
Confidence 22344444 455544330 01111110 10 111 124455566667767
Q ss_pred HHHHHHHHHHHHHHHhcCCCeE
Q 001531 447 AQRVHGLAGTFALGLKKLGTVE 468 (1058)
Q Consensus 447 a~~~~~~a~~l~~~L~~~G~~~ 468 (1058)
.++..++|.++++.|++..++.
T Consensus 265 l~~~~~~a~~la~~L~~~p~v~ 286 (394)
T PRK07050 265 LAAHDRSALEVAEWLKARPEIA 286 (394)
T ss_pred HHHHHHHHHHHHHHHHhCCCcc
Confidence 7788899999999999874343
No 298
>PRK07483 hypothetical protein; Provisional
Probab=99.62 E-value=2.7e-13 Score=160.68 Aligned_cols=344 Identities=15% Similarity=0.160 Sum_probs=210.4
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhC--CCceeeecCchHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIR 669 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G--~~~~~l~~~sGa~ge~a~llair 669 (1058)
..+|++.+++..++..+ +....+....-+. .+...++.+.|++++. ++. .++.++|++++++++..+|
T Consensus 42 ~~lGh~~p~v~~av~~q-l~~~~~~~~~~~~--------~~~~~~lae~L~~~~p~~~~~-v~f~~sGsEAve~AlklAr 111 (443)
T PRK07483 42 SCLGHSHPRVIAAIHAQ-IDRLAYAHTSFFT--------TEPAEALADRLVAAAPAGLEH-VYFVSGGSEAVEAALKLAR 111 (443)
T ss_pred hccCCCCHHHHHHHHHH-HHhccCccccccC--------CHHHHHHHHHHHHhCCCCCCE-EEEcCCcHHHHHHHHHHHH
Confidence 46788888777666665 2222221100011 1234478888999874 343 4678899999999999999
Q ss_pred HHHHHcCCCCCCEEEE-cCCCCCccHHHHHhCCc------------EEEEEcCCCCCC-C------------CHHHHHHH
Q 001531 670 AYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM------------KIVSVGTDAKGN-I------------NIEELRKA 723 (1058)
Q Consensus 670 ~y~~~~G~~~r~~Vli-p~saHg~~pa~a~~~G~------------~vv~V~~d~~g~-i------------D~e~L~~~ 723 (1058)
.|...+|..+|.+||. ..++||....+..+.|- .+..++.....+ . .+++++++
T Consensus 112 ~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 191 (443)
T PRK07483 112 QYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAK 191 (443)
T ss_pred HHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHH
Confidence 8876666445666664 67899987655433221 123333211111 0 13677776
Q ss_pred HHh-cCCCeEEEEEEcCC--Ccccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc--------CCcEEEe
Q 001531 724 AEA-NRDNLSTLMVTYPS--THGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHL 789 (1058)
Q Consensus 724 i~~-~~~~taaV~vt~Pn--~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~--------GaDi~~~ 789 (1058)
+.+ +.+++++|+++.-. ..|++.+ .+++|.++|++||+++|+|++ +.|+.+.|++ -+||+++
T Consensus 192 ~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV----~tGfGRtG~~~a~~~~gv~PDiv~~ 267 (443)
T PRK07483 192 ILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEV----MCGMGRTGTLFACEEDGVAPDLVTI 267 (443)
T ss_pred HHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecc----eeCcccCcHHHHHhhcCCCCCeeee
Confidence 643 34688999887532 2466542 489999999999999999998 4567677743 3688877
Q ss_pred CCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHH
Q 001531 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1058)
Q Consensus 790 s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1058)
.|.++ +|--.+|.+.+++++.+.+.... .. ....+++.|+++.++++.+.|..+-++++.
T Consensus 268 --gK~l~----gG~~Pi~av~~~~~i~~~~~~~~-------------~~-~~h~~T~~gnpl~~aaa~a~l~~i~~~~l~ 327 (443)
T PRK07483 268 --AKGLG----AGYQPIGAVLASDRIYDAIADGS-------------GF-FQHGHTYLGHATACAAALAVQRVIAEDGLL 327 (443)
T ss_pred --hhhhc----cCccccEEEEEcHHHHHHHhcCC-------------Cc-cccCCCCCCCHHHHHHHHHHHHHHHhcCHH
Confidence 47663 33213777888877665442110 00 001112446777888888888888777654
Q ss_pred HHHHHHHHHHHHHHHHHhcc---CCee--eccCCCccceEEEEeccc-cccc--CC-CCHHHHHHHHHHCCccccCCCC-
Q 001531 870 EASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRG-LKNT--AG-IEPEDVAKRLMDYGFHGPTMSW- 939 (1058)
Q Consensus 870 ~~a~~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~-~~~~--~g-~~~~~v~k~L~~~Gi~~~~~~~- 939 (1058)
+. .....++|.++|++. ++++ +.|. |. +.-+-+.... .+.. .. .....+.+++.++|+.+.....
T Consensus 328 ~~---~~~~g~~l~~~L~~l~~~~~~i~~vRG~-Gl-m~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~ 402 (443)
T PRK07483 328 AN---VRARGEQLRARLRERLGQHPHVGDIRGR-GL-FVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGT 402 (443)
T ss_pred HH---HHHHHHHHHHHHHHHHhcCCCeeeEeec-cc-EEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCcc
Confidence 43 345677888888653 3322 2332 32 2111121110 0000 00 0135688889999998743211
Q ss_pred ---CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001531 940 ---PVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1058)
Q Consensus 940 ---p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~~ 974 (1058)
+.+++|||.|+...|++|||+++++|.+++.++..
T Consensus 403 ~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~~ 440 (443)
T PRK07483 403 IDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAALA 440 (443)
T ss_pred ccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 11478999999999999999999999999887654
No 299
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.62 E-value=9.2e-14 Score=164.38 Aligned_cols=372 Identities=15% Similarity=0.129 Sum_probs=218.5
Q ss_pred CCHHHHHHHHHHHhcCccCcCcccccccccccCCcccccccccccccccc----cCCCCchhhhhcHHHHHHHHHHHHHH
Q 001531 568 HTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFAN----IHPFAPADQAQGYQEMFNNLGEWLCT 643 (1058)
Q Consensus 568 ~sE~e~~r~~~~l~~~~~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~----~~P~~p~e~~qG~~~~~~el~~~lae 643 (1058)
+.|.++.+.+-.+.+....++++..+|+-|..+++.....++ .+++.. ...+. ...| ....++++.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~--~~~~~a~~~~~~~~~---~~~G--~~~~~fe~~lA~ 74 (438)
T PRK15407 2 MTEEELRQQILELVREYAELAHAPKPFVPGKSPIPPSGKVID--AKELQNLVDASLDFW---LTTG--RFNDAFEKKLAE 74 (438)
T ss_pred ccHHHHHHHHHHHHHHHHHHhcccccccCCCCCCCcCccCCC--HHHHHHHHHHHHhCc---ccCC--hhHHHHHHHHHH
Confidence 577888888877777666666666677766665544332221 111110 00000 0123 235688999999
Q ss_pred HhCCCceeeecCchHHHHHHHHHHHHHH-HHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCC-CCCCCHHHHH
Q 001531 644 ITGFDSFSLQPNAGAAGEYAGLMVIRAY-HKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KGNINIEELR 721 (1058)
Q Consensus 644 l~G~~~~~l~~~sGa~ge~a~llair~y-~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~-~g~iD~e~L~ 721 (1058)
++|.+.+ +..++|+++...++.++... ....+.+++++||++...|......+...|++++.++++. ++.+|+++++
T Consensus 75 ~~g~~~~-v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le 153 (438)
T PRK15407 75 FLGVRYA-LLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLE 153 (438)
T ss_pred HhCCCeE-EEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHH
Confidence 9998864 56777877664444433210 0011334678999998877666666778999999999874 5789999999
Q ss_pred HHHHhcCCCeEEEEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCcccccCc-CCCCccCCcEEEeCCccccccCCC
Q 001531 722 KAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIGADVCHLNLHKTFCIPHG 800 (1058)
Q Consensus 722 ~~i~~~~~~taaV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl-~~pg~~GaDi~~~s~hKtf~~P~g 800 (1058)
++++ ++|++|+++++ +|... |+++|.++|+++|++|++|+++..+..-- ...|.+| |+.++|+|.+-.++
T Consensus 154 ~~i~---~~tkaVi~~~~--~G~p~-dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~g-d~~~fSf~~~k~~~-- 224 (438)
T PRK15407 154 AAVS---PKTKAIMIAHT--LGNPF-DLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFG-DIATLSFYPAHHIT-- 224 (438)
T ss_pred HHcC---cCCeEEEEeCC--CCChh-hHHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccC-ceEEEeCCCCCCcc--
Confidence 9996 78999999875 46665 79999999999999999999985432211 2246666 99999987653332
Q ss_pred CCCCceeEEEEeCC-CCCCCCC-CCcccC------CC--------C--C--CCCCCC-----CC-CCCCccchhhHHHHH
Q 001531 801 GGGPGMGPIGVKKH-LAPFLPS-HPVVST------GG--------I--P--APEKSQ-----PL-GTIAAAPWGSALILP 854 (1058)
Q Consensus 801 ~GGPg~G~i~~~~~-l~~~lpg-~~vg~~------~d--------~--g--~~~~~~-----~t-~~i~sa~~g~~~~~~ 854 (1058)
.|.| |+++++++ +...+.. +..|.. .+ + + .++... .. .|... +-..++
T Consensus 225 -~geG-G~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rm----sel~AA 298 (438)
T PRK15407 225 -MGEG-GAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKI----TDMQAA 298 (438)
T ss_pred -ccCc-eEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccCc----cHHHHH
Confidence 2344 88888853 3222110 000100 00 0 0 000000 00 01111 112222
Q ss_pred HHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCC-eeecc-CC--CccceEEEEecccccccCCCCHHHHHHHHHHC
Q 001531 855 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYP-ILFRG-VN--GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (1058)
Q Consensus 855 ~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~-v~~~g-~~--~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~ 930 (1058)
.+..-|. .+.+..++..+++.++.+.|+++.. +..+. +. .+..|.+.+.+.. ..+.+.+++.+.|.++
T Consensus 299 ig~~qL~-----~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~Rd~l~~~L~~~ 370 (438)
T PRK15407 299 IGLAQLE-----KLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKE---DAGFTRVELVKYLEEN 370 (438)
T ss_pred HHHHHHH-----HHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECC---cCCCCHHHHHHHHHHC
Confidence 3333332 2444555566778888888876421 21111 11 1233455555431 1245678999999999
Q ss_pred CccccCCC--------------------CCC-----CCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001531 931 GFHGPTMS--------------------WPV-----PGTLMIEPTESESKEELDRYCDALISIRE 970 (1058)
Q Consensus 931 Gi~~~~~~--------------------~p~-----~~~Lris~te~~t~eeid~fi~aL~~i~~ 970 (1058)
||.....+ +|. ...|.+-.....|++|++++++++++++.
T Consensus 371 GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 371 KIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred CCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 99643111 121 13355545556689999999999998764
No 300
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.62 E-value=1.4e-13 Score=162.46 Aligned_cols=298 Identities=16% Similarity=0.217 Sum_probs=188.8
Q ss_pred HHHHHHHHHHHhCCC-ceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCCc---------
Q 001531 634 FNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM--------- 702 (1058)
Q Consensus 634 ~~el~~~lael~G~~-~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G~--------- 702 (1058)
..++.++|+++++-+ ...++.++|+++.++.+...|.|...+|..+|.+|| +..++||..-.+..+.|-
T Consensus 90 ~~~la~~l~~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~ 169 (427)
T TIGR00508 90 AIELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYK 169 (427)
T ss_pred HHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCccccccccc
Confidence 346778888887543 234677889999888888888876555543455555 577899976544333221
Q ss_pred ----EEEEEcCCCC------CCCCHHHHHHHHHhcCCCeEEEEEEcC-C-Cccccc---ccHHHHHHHHHHcCCEEEEec
Q 001531 703 ----KIVSVGTDAK------GNINIEELRKAAEANRDNLSTLMVTYP-S-THGVYE---EGIDEICKIIHDNGGQVYMDG 767 (1058)
Q Consensus 703 ----~vv~V~~d~~------g~iD~e~L~~~i~~~~~~taaV~vt~P-n-~~G~i~---~dI~eI~~lah~~g~lv~vD~ 767 (1058)
.+..++.... ..-|+++++++++++.+++++|++..- . ..|... .++++|+++|+++|+++++|+
T Consensus 170 ~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DE 249 (427)
T TIGR00508 170 GYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADE 249 (427)
T ss_pred ccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 1122222111 112678888898766678888888752 3 334432 379999999999999999999
Q ss_pred cCcccccCcCCCCc--------cCCcEEEeCCccccccCCCCCC-CceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCC
Q 001531 768 ANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQP 838 (1058)
Q Consensus 768 a~~~al~gl~~pg~--------~GaDi~~~s~hKtf~~P~g~GG-Pg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~ 838 (1058)
++. |+.+.|. ..+||+++ .|.|+ || .-++.+++++++.+.+..... ..
T Consensus 250 v~t----G~Gr~G~~~~~~~~~v~pDi~~~--gK~l~-----gG~~p~~a~~~~~~~~~~~~~~~~------------~~ 306 (427)
T TIGR00508 250 IAT----GFGRTGKLFACEHAGVVPDILCV--GKALT-----GGYMTLSATVTTDKVAQTISSGEA------------GC 306 (427)
T ss_pred ccc----CCCcCCccchhhhcCCCCCEEEe--chhhh-----cCcccceEEEEcHHHHHHHhcCCC------------Cc
Confidence 962 3444442 24688875 58772 44 356777777666554421100 00
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCee--eccCCCccceEEEEecccccc
Q 001531 839 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKN 914 (1058)
Q Consensus 839 t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~--~~v~--~~g~~~~~~~e~vv~~~~~~~ 914 (1058)
....+++.|++..++++.+.+..+..+.+. ++...+.++|+++|+++ .... ..|. |. + +.+.+..
T Consensus 307 -~~~~~T~~g~p~~~aaa~a~l~~l~~~~~~---~~~~~~~~~l~~~L~~l~~~~~i~~vrg~-G~-~--~~i~~~~--- 375 (427)
T TIGR00508 307 -FMHGPTFMGNPLACAVAEASLAILLEGEWQ---KQVSAIENQLKRELSPLRKNPVVKDVRVL-GA-I--GVVEMYK--- 375 (427)
T ss_pred -cccCCCCCcCHHHHHHHHHHHHHHHhCCHH---HHHHHHHHHHHHHHHHhhcCCCEEeEecc-cc-E--EEEEECC---
Confidence 001112335666677777888877655543 45556788999999875 2211 1121 22 2 2233221
Q ss_pred cCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 915 TAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 915 ~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
......+.++|.++|+.+... .+.+|++|+..+|++|||++++++.+++.|
T Consensus 376 --~~~~~~~~~~l~~~Gv~~~~~----~~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 376 --PVNVEELQKKFVEQGVWIRPF----GKLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred --ccCHHHHHHHHHHCCeEEEec----CCEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 134678999999999987532 357999999999999999999999998754
No 301
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.62 E-value=2.2e-13 Score=160.38 Aligned_cols=323 Identities=17% Similarity=0.200 Sum_probs=197.8
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHh--C--CC-ceeeecCchHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTIT--G--FD-SFSLQPNAGAAGEYAGLM 666 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~--G--~~-~~~l~~~sGa~ge~a~ll 666 (1058)
..+|++.+++..++..+. ....+.....+. .+...++.++|++++ + ++ .+.+..++|++++++++.
T Consensus 47 ~~lGh~~p~v~~ai~~ql-~~~~~~~~~~~~--------~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~Alk 117 (412)
T TIGR02407 47 LNYGHNNPKLKQALIDYL-ADDGIIHSLDMA--------TEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALK 117 (412)
T ss_pred ccCCCCCHHHHHHHHHHH-hhccceeccccC--------cHHHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHH
Confidence 467888887776666652 211111100111 123446778888874 2 32 234556899999988888
Q ss_pred HHHHHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCC------------cEEEEEcCCCCC---CCCHHHHHHHHHhcC--
Q 001531 667 VIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG------------MKIVSVGTDAKG---NINIEELRKAAEANR-- 728 (1058)
Q Consensus 667 air~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G------------~~vv~V~~d~~g---~iD~e~L~~~i~~~~-- 728 (1058)
.+|.| + +|++|| ...++||....+....| ..++.+|..... .-+++.+++.++++.
T Consensus 118 lAr~~---t---gr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~ 191 (412)
T TIGR02407 118 LARKV---T---GRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSG 191 (412)
T ss_pred HHhhh---c---CCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCC
Confidence 88876 2 345555 56789998766543221 134555542211 135788999997543
Q ss_pred -CCeEEEEEEcC-CCccccc---ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCc--------cCCcEEEeCCcccc
Q 001531 729 -DNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY--------IGADVCHLNLHKTF 795 (1058)
Q Consensus 729 -~~taaV~vt~P-n~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~--------~GaDi~~~s~hKtf 795 (1058)
+++++|+++.- +..|++. ..+++|.++|+++|+++++|+++ .|+.+.|. ..+|++++ .|++
T Consensus 192 ~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~----tG~GRtG~~~a~~~~~v~PDi~~~--~K~l 265 (412)
T TIGR02407 192 VDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQ----AGCGRTGTFFSFEPAGIEPDIVCL--SKSI 265 (412)
T ss_pred CCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh----hCCCccchhHHhcccCCCCCEEEe--chhc
Confidence 46788876542 4567643 35899999999999999999985 34544442 34788875 4876
Q ss_pred ccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHH-HchhhHHHHHHH
Q 001531 796 CIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM-MGSKGLTEASKI 874 (1058)
Q Consensus 796 ~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~-lG~eGl~~~a~~ 874 (1058)
++||-.+|++++++++ ..+.... ..+++.|+++.++++.+.+.. +..+.+.+ +
T Consensus 266 ----g~~G~pigav~~~~~~-~~~~~~~------------------~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~---~ 319 (412)
T TIGR02407 266 ----SGYGLPLALTLIKPEL-DVWKPGE------------------HNGTFRGNNLAFVTATAALEYYWSDDAFEK---A 319 (412)
T ss_pred ----cCCccceeEEEEchhh-hccCCCc------------------cCCCCCccHHHHHHHHHHHHHHhcccHHHH---H
Confidence 3435558999998775 3322110 011123455656666777774 65544443 3
Q ss_pred HHHHHHHHHHHHhcc---CC-ee--eccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEE
Q 001531 875 AILNANYMAKRLEKH---YP-IL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIE 948 (1058)
Q Consensus 875 ~~~~a~yL~~~L~~~---~~-v~--~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris 948 (1058)
..+..++++++|+.. ++ +. ..| .|.+ +.+.+.+ ......+.+.|.++|+.+.... +..+.|||+
T Consensus 320 ~~~~g~~l~~~l~~l~~~~~~~~~~vrg-~Gl~---~~l~l~~-----~~~~~~~~~~~~~~Gv~v~~~~-~~~~~lr~~ 389 (412)
T TIGR02407 320 VQRKSEIIQERLDRIVAEYPELIKQVRG-RGLM---QGIECGD-----GDLAGKIAKAAFENGLIIETSG-PNDEVIKLL 389 (412)
T ss_pred HHHHHHHHHHHHHHHHhhCCCceEeeec-ceeE---EEEEecC-----hHHHHHHHHHHHHCCCEEeccC-CCCCEEEEE
Confidence 345566777777653 32 21 112 1221 3344431 1235678899999999875322 224789999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHH
Q 001531 949 PTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 949 ~te~~t~eeid~fi~aL~~i~~e 971 (1058)
|+..+|++|+|+++++|.++++|
T Consensus 390 p~l~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 390 PPLTIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhC
Confidence 99999999999999999998754
No 302
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.62 E-value=4.5e-14 Score=164.18 Aligned_cols=217 Identities=17% Similarity=0.153 Sum_probs=149.9
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHH-H---HHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA-T---AAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa-~---a~~~G~~vv~V~~ 709 (1058)
..++++.++++.|.+.+ +..++|.++..++++++ . +++++|+++...|+.... . ....|++++.++.
T Consensus 55 ~~~Le~~lA~leg~e~i-vvt~gg~~Ai~~~l~al---l-----~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~ 125 (388)
T PRK08861 55 RGLLEQTLSELESGKGA-VVTNCGTSALNLWVSAL---L-----GPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQ 125 (388)
T ss_pred HHHHHHHHHHHhCCCeE-EEECCHHHHHHHHHHHH---c-----CCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECC
Confidence 44788999999997654 45566665554333332 1 256889998776664322 1 2346788888863
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++.. +.+..|.++|+|+++
T Consensus 126 -----~d~e~l~~~i~---~~tklV~lesP~NPtG~v~-dl~~I~~la~~~gi~vIvDea~~~--~~~~~pl~~GaDivv 194 (388)
T PRK08861 126 -----SDAAALDAALA---KKPKLILLETPSNPLVRVV-DIAELCQKAKAVGALVAVDNTFLT--PVLQKPLELGADFVI 194 (388)
T ss_pred -----CCHHHHHHhcC---cCCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEECCccc--cccCCCcccCCCEEE
Confidence 58999999996 789999999994 789888 799999999999999999998653 234577889999999
Q ss_pred eCCccccccCCCCCCCceeEEEEeC-CCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001531 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~G~i~~~~-~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1058)
.|+||+++.| ++--+|++.+++ ++.+.+.. ....++...+ ++ -+|+...|-+-
T Consensus 195 ~S~tK~l~G~---~d~~gG~i~~~~~~~~~~~~~-------------~~~~~G~~~~-p~---------~a~l~~rgl~T 248 (388)
T PRK08861 195 HSTTKYINGH---SDVIGGVLITKTKEHAEELAW-------------WGNCIGATGT-PF---------DSYMTLRGIRT 248 (388)
T ss_pred eecceeccCC---CcceeEEEEecHHHHHHHHHH-------------HHhccCCCCC-hH---------HHHHHHhcCCC
Confidence 9999998521 111267777754 33222210 0011122221 21 23466677777
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC---Ceeecc
Q 001531 868 LTEASKIAILNANYMAKRLEKHY---PILFRG 896 (1058)
Q Consensus 868 l~~~a~~~~~~a~yL~~~L~~~~---~v~~~g 896 (1058)
+.-+.++..++|..+++.|+++. .|.|+|
T Consensus 249 l~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~ 280 (388)
T PRK08861 249 LGARMRVHEESAQQILAYLQTQSLVGTIYHPS 280 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCC
Confidence 88888899999999999999863 455665
No 303
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.62 E-value=7.2e-14 Score=161.49 Aligned_cols=282 Identities=15% Similarity=0.112 Sum_probs=179.5
Q ss_pred HHHHHHHHHHhCCCce-eeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCC
Q 001531 635 NNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1058)
Q Consensus 635 ~el~~~lael~G~~~~-~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g 713 (1058)
.++++.+++.+|.+.. .+..++|++.. ..++++.+. .++++|+++...+..+...+++.|++++.++.++++
T Consensus 66 ~~lr~~ia~~~~~~~~~~I~~t~G~~~~--i~~~~~~~~-----~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~ 138 (356)
T PRK04870 66 AALKAALRAAMGVPAGADVLLGNGSDEL--IQLLALACA-----KPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADF 138 (356)
T ss_pred HHHHHHHHHHhCcCCCCcEEEcCCHHHH--HHHHHHHhc-----CCCCEEEECCCCHHHHHHHHHHcCCEEEEecCCCCC
Confidence 4678889999998642 45666666532 223333321 256889999876655555678899999999998788
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccC--cC-CCCccCCcEEEe
Q 001531 714 NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG--LT-SPGYIGADVCHL 789 (1058)
Q Consensus 714 ~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~g--l~-~pg~~GaDi~~~ 789 (1058)
.+|+++|++++.. .++++|++++|+ .+|.+. +.+++.++++..++++++|+++.. +.. +. ......--++..
T Consensus 139 ~~d~~~l~~~~~~--~~~~~v~l~~p~NPtG~~~-~~~~~~~i~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~vi~~~ 214 (356)
T PRK04870 139 TLDLPAMLAAIAE--HRPALVFLAYPNNPTGNLF-DDADVERIIEAAPGLVVVDEAYQP-FAGDSWLPRLARFPNLLVMR 214 (356)
T ss_pred CCCHHHHHHHhhc--CCCCEEEEcCCCCCCCCCC-CHHHHHHHHHHCCCEEEEECCchh-hcCcchHHHHhhCCCEEEEe
Confidence 8999999999962 478889999984 789987 577777777666889999998631 211 10 011112235566
Q ss_pred CCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHH
Q 001531 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1058)
Q Consensus 790 s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1058)
+++| |+ ..|.++|++++++++.+.+... +...+++ ..++. ++...+. ..+.++
T Consensus 215 S~SK-~~----~~GlRiG~~i~~~~~i~~~~~~--------------~~~~~~~--~~~q~----~a~~~l~--~~~~~~ 267 (356)
T PRK04870 215 TVSK-LG----LAGLRLGYLAGHPAWIAELDKV--------------RPPYNVN--VLTQA----TALFALE--HVDVLD 267 (356)
T ss_pred cchh-hh----hHHHhhhhhhCCHHHHHHHHHc--------------cCCCcCC--HHHHH----HHHHHHh--CHHHHH
Confidence 7777 54 3477899999887655433110 0001111 11221 1122222 122355
Q ss_pred HHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccC-CCC-C-CCCEEE
Q 001531 870 EASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSW-P-VPGTLM 946 (1058)
Q Consensus 870 ~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~-~~~-p-~~~~Lr 946 (1058)
+..++...+++++.+.|++...+.+..+.+ . -++++++ +..++.+.|.++||.+.. ..| + .++.+|
T Consensus 268 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~--~~~~~~~--------~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iR 336 (356)
T PRK04870 268 AQAAQLRAERTRLAAALAALPGVTVFPSAA-N--FILVRVP--------DAAAVFDGLKTRGVLVKNLSGMHPLLANCLR 336 (356)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcEECCCCC-e--EEEEECC--------CHHHHHHHHHHCCEEEEECCCCCCCCCCeEE
Confidence 556666678888888887752332222222 2 2455543 457888999999998643 223 2 357999
Q ss_pred EEcCCCCCHHHHHHHHHHHHHH
Q 001531 947 IEPTESESKEELDRYCDALISI 968 (1058)
Q Consensus 947 is~te~~t~eeid~fi~aL~~i 968 (1058)
|++. +.+++++|+++|+++
T Consensus 337 is~~---~~~~~~~l~~al~~~ 355 (356)
T PRK04870 337 VTVG---TPEENAQFLAALKAA 355 (356)
T ss_pred EeCC---CHHHHHHHHHHHHHh
Confidence 9985 689999999999875
No 304
>PRK03321 putative aminotransferase; Provisional
Probab=99.62 E-value=2.8e-14 Score=164.60 Aligned_cols=282 Identities=13% Similarity=0.134 Sum_probs=180.5
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g 713 (1058)
..++++.+++++|.+...+..++|+++. ...+++... .++++|+++...+..++..++..|++++.++.++++
T Consensus 59 ~~~lr~~ia~~~~~~~~~I~~~~G~~~~--l~~~~~~~~-----~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~ 131 (352)
T PRK03321 59 AVELRAALAEHLGVPPEHVAVGCGSVAL--CQQLVQATA-----GPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPDH 131 (352)
T ss_pred HHHHHHHHHHHhCcCHHHEEECCCHHHH--HHHHHHHhc-----CCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCCC
Confidence 3577888999999876556666776532 222333321 256889998765545555678899999999998778
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHH--cCCEEEEeccCccc-ccCcCCCC----ccCCc
Q 001531 714 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHD--NGGQVYMDGANMNA-QVGLTSPG----YIGAD 785 (1058)
Q Consensus 714 ~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~--~g~lv~vD~a~~~a-l~gl~~pg----~~GaD 785 (1058)
.+|+++++++++ +++++|++++| |.+|.+- +.++|.++|+. +|+++++|+++..- ..+...+. +...+
T Consensus 132 ~~~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~-~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 207 (352)
T PRK03321 132 THDLDAMAAAIT---DRTRLIFVCNPNNPTGTVV-TPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPN 207 (352)
T ss_pred CCCHHHHHHhhc---cCCCEEEEeCCCCCcCCCc-CHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCC
Confidence 899999999996 68889999999 5789987 68999999987 59999999986311 11111111 11123
Q ss_pred -EEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHc
Q 001531 786 -VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1058)
Q Consensus 786 -i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1058)
+++.++.|.|+.| |-++|++++++++.+.+... . ...+.+...+ .++.+.+. .
T Consensus 208 vi~~~S~SK~~g~~----GlRiG~~v~~~~~~~~~~~~--------------~--~~~~~s~~~q----~~a~~~l~--~ 261 (352)
T PRK03321 208 VVVLRTFSKAYGLA----GLRVGYAVGHPEVIAALRKV--------------A--VPFSVNSLAQ----AAAIASLA--A 261 (352)
T ss_pred EEEEecchHHhhhH----HHhhhhhcCCHHHHHHHHHh--------------c--CCCCCCHHHH----HHHHHHhc--C
Confidence 4456778887533 56799999887665543210 0 0111111112 11222222 2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCC
Q 001531 865 SKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPG 943 (1058)
Q Consensus 865 ~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~ 943 (1058)
.+.+.+..+....+.+++.+.|++. +.+ ..+.+.+ +++++. .+..++.+.|.++||.+.... .+
T Consensus 262 ~~~~~~~~~~~~~~r~~~~~~L~~~~~~~--~~~~g~~---i~i~l~-------~~~~~~~~~l~~~gI~v~~~~---~~ 326 (352)
T PRK03321 262 EDELLERVDAVVAERDRVRAALRAAGWTV--PPSQANF---VWLPLG-------ERTADFAAAAAEAGVVVRPFA---GE 326 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCcc--CCCCCCE---EEEeCC-------CCHHHHHHHHHHCCEEEEccC---CC
Confidence 2233444444555667788888764 332 1222322 455543 256889999999999875422 34
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001531 944 TLMIEPTESESKEELDRYCDALISIRE 970 (1058)
Q Consensus 944 ~Lris~te~~t~eeid~fi~aL~~i~~ 970 (1058)
.+||++ .+.+++++|+++|+++++
T Consensus 327 ~iRi~~---~~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 327 GVRVTI---GAPEENDAFLRAARAWRA 350 (352)
T ss_pred cEEEee---CCHHHHHHHHHHHHHHhc
Confidence 699997 578999999999988643
No 305
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.62 E-value=2.9e-14 Score=157.51 Aligned_cols=292 Identities=17% Similarity=0.143 Sum_probs=181.9
Q ss_pred HHHHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHH--HHh-CCcEEEE
Q 001531 630 YQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT--AAM-CGMKIVS 706 (1058)
Q Consensus 630 ~~~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~--a~~-~G~~vv~ 706 (1058)
.-+...++++.+++++|...+ ++..+|++++. ++++... .++..|++...+|-..... .+. .++..+.
T Consensus 33 ~D~~~~~~e~~~ae~~g~~a~-~Fv~sGT~aN~---lal~~~~-----~~~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~ 103 (342)
T COG2008 33 EDPTTNALEQRIAELFGKEAA-LFVPSGTQANQ---LALAAHC-----QPGESVICHETAHIYTDECGAPEFFGGGQKLP 103 (342)
T ss_pred CCHHHHHHHHHHHHHhCCceE-EEecCccHHHH---HHHHHhc-----CCCCeEEEeccccceecccCcHHHHcCCceec
Confidence 335567889999999999444 55557887774 3333322 1455788888888543322 233 3343334
Q ss_pred EcCCCCCCCCHHHHHHHHHh----cCCCeEEEEEEcCCCccccc--ccHHHHHHHHHHcCCEEEEeccCc-ccccCcCCC
Q 001531 707 VGTDAKGNINIEELRKAAEA----NRDNLSTLMVTYPSTHGVYE--EGIDEICKIIHDNGGQVYMDGANM-NAQVGLTSP 779 (1058)
Q Consensus 707 V~~d~~g~iD~e~L~~~i~~----~~~~taaV~vt~Pn~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~-~al~gl~~p 779 (1058)
+...++|.+++++|++.|.. |.+...++.++.++..|.+- +.|++|+++||++|+.||+|||-. |++..+..+
T Consensus 104 ~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~ 183 (342)
T COG2008 104 IVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVA 183 (342)
T ss_pred cCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCC
Confidence 44357899999999998863 22234455566667678874 258999999999999999999873 455544433
Q ss_pred C---ccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHH
Q 001531 780 G---YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPIS 856 (1058)
Q Consensus 780 g---~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a 856 (1058)
. ..++|++.+++.|.. |.|+..+++.+..++..+.- +.|-.+... .++..++++
T Consensus 184 ~~~~~~~~D~v~~~~tK~g------~~~~gAiv~gn~~~~~~a~~-------------~rK~~Ggl~----~k~r~laA~ 240 (342)
T COG2008 184 LKTIKSYVDSVSFCLTKGG------GAPVGAIVFGNRDFAKRARR-------------WRKRAGGLM----RKARFLAAQ 240 (342)
T ss_pred HHHHHhhCCEEEEecccCC------cceeeeEEEcCHHHHHHHHH-------------HHHHhcccH----hhhhHHHHH
Confidence 2 248999999998854 44555666666665544310 011111111 144455555
Q ss_pred HHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccc
Q 001531 857 YTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 934 (1058)
Q Consensus 857 ~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~--~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~ 934 (1058)
|.+ ++..+-.+....+....|+.|++.|.+. +++.++ +..|.+.++++. ...+.|...||..
T Consensus 241 ~~~--~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~----~~tN~vf~~l~~----------~~i~~l~~~~~~~ 304 (342)
T COG2008 241 GLY--ALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFP----VETNMVFVRLPE----------SAIEALRLAGALF 304 (342)
T ss_pred HHH--HHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccC----CcccEEEEECCh----------HHHHHHHhhchhh
Confidence 544 3333334555555545588888888853 555442 345666677641 2236677677654
Q ss_pred cC--CCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001531 935 PT--MSWPVPGTLMIEPTESESKEELDRYCDALISIR 969 (1058)
Q Consensus 935 ~~--~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~ 969 (1058)
.. +..+....+|+..+..+|++|||+|+..+++.+
T Consensus 305 ~~~~~~~~~~~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 305 YRGVLIGAHGEIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred eeeeeccCCCceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 32 111111379999999999999999999988753
No 306
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.61 E-value=6.2e-14 Score=165.22 Aligned_cols=141 Identities=24% Similarity=0.235 Sum_probs=118.1
Q ss_pred HHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC-ch---h
Q 001531 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD-LK---D 290 (1058)
Q Consensus 215 e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~-~~---~ 290 (1058)
++++.+|++.|.+. +.++.+|++|+.++++++. ++||+||++...|..+...+...++..|++++.++ .+ +
T Consensus 73 ~Le~~lA~l~g~~~--av~~sSG~aAi~~al~all---~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vdd~~d~e~ 147 (436)
T PRK07812 73 VVEQRIAALEGGVA--ALLLASGQAAETFAILNLA---GAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVEDPDDLDA 147 (436)
T ss_pred HHHHHHHHHhCCCe--EEEEccHHHHHHHHHHHHh---CCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEECCCCCHHH
Confidence 56789999999876 7889999999988887762 37999999999999988777665667899999885 33 4
Q ss_pred hhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-ccccc
Q 001531 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGV 361 (1058)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~ 361 (1058)
+++ ++++|++|++.+| |++|.+.|+++|+++||++|++++|| +.++.+.+..|.++|+|+++.|+ |.+++
T Consensus 148 l~~ai~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD-~t~a~~~~~~pl~~GaDivv~S~tK~lgg 220 (436)
T PRK07812 148 WRAAVRPNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVD-NTIATPYLIRPLEHGADIVVHSATKYLGG 220 (436)
T ss_pred HHHhCCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhcCCCEEEEecccccCC
Confidence 555 7889999999987 78999999999999999999999994 45666777778889999999998 76653
No 307
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.61 E-value=8e-14 Score=162.08 Aligned_cols=216 Identities=16% Similarity=0.096 Sum_probs=148.9
Q ss_pred HHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHH----HHhCCcEEEEEcCC
Q 001531 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTD 710 (1058)
Q Consensus 635 ~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~----a~~~G~~vv~V~~d 710 (1058)
.++++.++++.|.+.+ +...+|..|..++++++. +++++||+++..|+..... ....|+++..++.+
T Consensus 64 ~~Le~~iA~le~~~~~-~~~~sG~~Ai~~~l~all--------~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~ 134 (394)
T PRK09028 64 FAFQAAIVELEGGAGT-ALYPSGAAAISNALLSFL--------KAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPM 134 (394)
T ss_pred HHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh--------CCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCC
Confidence 3678899999887654 445567666644444431 2568899988766443322 34578998887642
Q ss_pred CCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEEe
Q 001531 711 AKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHL 789 (1058)
Q Consensus 711 ~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~~ 789 (1058)
|.++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++.. +...+|.++|+|+++.
T Consensus 135 -----~~e~l~~~l~---~~TklV~lespsNPtg~v~-dl~~I~~la~~~g~~lvvD~t~a~--p~~~~Pl~~GaDivv~ 203 (394)
T PRK09028 135 -----IGEGIRELIR---PNTKVLFLESPGSITMEVQ-DVPTLSRIAHEHDIVVMLDNTWAS--PINSRPFEMGVDISIQ 203 (394)
T ss_pred -----CHHHHHHhcC---cCceEEEEECCCCCCCcHH-HHHHHHHHHHHcCCEEEEECCccc--cccCCccccCceEEEE
Confidence 5688998886 789999999994 678887 899999999999999999998643 3357889999999999
Q ss_pred CCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHH
Q 001531 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1058)
Q Consensus 790 s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1058)
++||+++.+ |.--+|.++.++++.+.+-. .....+...+ ++ -+|+...|-+-+.
T Consensus 204 S~tK~l~Gh---~d~~~G~~~~~~~~~~~l~~-------------~~~~~G~~~~-p~---------~a~l~~rgl~TL~ 257 (394)
T PRK09028 204 AATKYIVGH---SDVMLGTATANEKHWDQLRE-------------HSYLMGQCTS-PD---------DVYLAMRGLRTLG 257 (394)
T ss_pred eCCeEecCC---CCEEEEEEECCHHHHHHHHH-------------HHHhcCCCCC-HH---------HHHHHHcccCcHH
Confidence 999999521 22236666555443222210 0001122111 11 2445666777788
Q ss_pred HHHHHHHHHHHHHHHHHhcc---CCeeecc
Q 001531 870 EASKIAILNANYMAKRLEKH---YPILFRG 896 (1058)
Q Consensus 870 ~~a~~~~~~a~yL~~~L~~~---~~v~~~g 896 (1058)
-+.++..+||..+++.|+++ -.|.|+|
T Consensus 258 lR~~~~~~na~~la~~L~~~p~v~~V~yPg 287 (394)
T PRK09028 258 VRLAQHEKNALKVANWLATRPEVDHVRHPA 287 (394)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCccEEECCC
Confidence 88889999999999999986 3456665
No 308
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.61 E-value=1.6e-13 Score=161.04 Aligned_cols=333 Identities=14% Similarity=0.126 Sum_probs=196.5
Q ss_pred ccccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCC---ce-eeecCchHHHHHHHH
Q 001531 590 SMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD---SF-SLQPNAGAAGEYAGL 665 (1058)
Q Consensus 590 ~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~---~~-~l~~~sGa~ge~a~l 665 (1058)
.++.|+.+.+.+++................-|.+ .+|..++...+.+++.+..|.+ .. .+..++|++. ++.
T Consensus 30 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~--al~ 104 (396)
T PRK09147 30 PPISLSIGEPKHPTPAFIKDALAANLDGLASYPT---TAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSRE--ALF 104 (396)
T ss_pred CeEecCCCCCCCCCCHHHHHHHHHHhhhhcCCCC---CCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHH--HHH
Confidence 4567777776655332211110000011122322 3576666667777777776854 33 5666566553 233
Q ss_pred HHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCc
Q 001531 666 MVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STH 742 (1058)
Q Consensus 666 lair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~ 742 (1058)
++++.+. .+| +.+++|+++.+.+..+...+.+.|++++.||++++ ..+|+++|++++. +++++|++++| |.+
T Consensus 105 ~~~~~l~-~~~-~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~---~~~k~i~l~nP~NPT 179 (396)
T PRK09147 105 AFAQTVI-DRD-GPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVW---ARTQLLFVCSPGNPT 179 (396)
T ss_pred HHHHHHc-CCC-CCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHh---hccEEEEEcCCCCCc
Confidence 3344332 120 12678999988776666778899999999999754 4799999998886 68899999999 478
Q ss_pred cccc--ccHHHHHHHHHHcCCEEEEeccCccc-ccCc-CCCC------ccCCc-----EEEeCCccccccCCCCCCCcee
Q 001531 743 GVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVGL-TSPG------YIGAD-----VCHLNLHKTFCIPHGGGGPGMG 807 (1058)
Q Consensus 743 G~i~--~dI~eI~~lah~~g~lv~vD~a~~~a-l~gl-~~pg------~~GaD-----i~~~s~hKtf~~P~g~GGPg~G 807 (1058)
|.+- +.+++|+++|+++|+++++|.++..- ..+- ..+. ..+.| |++.++.|.|+.| |.++|
T Consensus 180 G~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~----GlRiG 255 (396)
T PRK09147 180 GAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVP----GLRSG 255 (396)
T ss_pred CccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCc----cceee
Confidence 8874 36899999999999999999986421 1110 0110 12222 6677888877544 78899
Q ss_pred EEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHh
Q 001531 808 PIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLE 887 (1058)
Q Consensus 808 ~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~ 887 (1058)
++++++++.+.+-.. +.....+.+...+... ..+| ...+-+++..+...++.+.+.+.|+
T Consensus 256 ~~~~~~~l~~~~~~~--------------~~~~~~~~~~~~q~a~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~L~ 315 (396)
T PRK09147 256 FVAGDAALLKKFLLY--------------RTYHGCAMPPAVQAAS-IAAW-----NDEAHVRENRALYREKFDAVTPILA 315 (396)
T ss_pred eecCCHHHHHHHHHH--------------hhhcccCCCHHHHHHH-HHHh-----cchhHHHHHHHHHHHHHHHHHHHHH
Confidence 999887665433100 0001111111122111 1111 1223345555556667777888887
Q ss_pred ccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHH-HCCcccc-CCCC--------CCCCEEEEEcCCCCCHHH
Q 001531 888 KHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHGP-TMSW--------PVPGTLMIEPTESESKEE 957 (1058)
Q Consensus 888 ~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~-~~Gi~~~-~~~~--------p~~~~Lris~te~~t~ee 957 (1058)
+.+.+.. +++..+ ++++++ .+..+++++|. ++|+.+. ...| +..+.+||++.. +.++
T Consensus 316 ~~~~~~~--p~~g~f--~~~~~~-------~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~--~~~~ 382 (396)
T PRK09147 316 PVLDVQL--PDAGFY--LWAKVP-------GDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA--PLAE 382 (396)
T ss_pred HhcCCCC--CCeeEE--EEEECC-------CCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC--CHHH
Confidence 7544321 223222 556764 24578888886 6798753 2222 124789999874 4677
Q ss_pred HHHHHHHHHHHH
Q 001531 958 LDRYCDALISIR 969 (1058)
Q Consensus 958 id~fi~aL~~i~ 969 (1058)
++..++.|++++
T Consensus 383 l~~~l~rl~~~~ 394 (396)
T PRK09147 383 CVEAAERIVDFC 394 (396)
T ss_pred HHHHHHHHHHHh
Confidence 777777776654
No 309
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.61 E-value=1.3e-13 Score=158.99 Aligned_cols=299 Identities=16% Similarity=0.176 Sum_probs=193.5
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY 671 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y 671 (1058)
..+|+|.+++..++..+. ..-.+... -|.. +...++.+.+++++|.+.+ +..++|+++.++++.++|.|
T Consensus 36 ~~lGh~~p~v~~ai~~ql-~~~~~~~~-~~~~--------~~~~~la~~l~~~~~~~~v-~~~~SGseA~e~Alklar~~ 104 (364)
T PRK04013 36 NVLGHNHPEWVEEMSEQL-EKLVVAGP-MFEH--------EEKEEMLEELSKWVNYEYV-YMGNSGTEAVEAALKFARLY 104 (364)
T ss_pred ccCCCCCHHHHHHHHHHH-HhcCCccC-CcCC--------HHHHHHHHHHHhhcCCCEE-EEeCchHHHHHHHHHHHHHH
Confidence 357888776666555542 21111110 1111 2245778889999887754 66789999988888888876
Q ss_pred HHHcCCCCCCEEE-EcCCCCCccHHHHHh-------CCc-----EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEc
Q 001531 672 HKARGDHHRNVCI-IPVSAHGTNPATAAM-------CGM-----KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTY 738 (1058)
Q Consensus 672 ~~~~G~~~r~~Vl-ip~saHg~~pa~a~~-------~G~-----~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~ 738 (1058)
. +|++|+ ...++||..-.+... .++ .++.+|. .|++++++.++ +++++|+++.
T Consensus 105 ~------gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~i~---~~~aAvivEp 170 (364)
T PRK04013 105 T------GRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF-----NDVEAAKEAIT---KETAAVIFEP 170 (364)
T ss_pred h------CCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC-----CCHHHHHHHhc---CCcEEEEEcC
Confidence 2 345565 567889976554332 112 1333443 37889999886 7899998876
Q ss_pred CC-Cccccccc---HHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc--------CCcEEEeCCccccccCCCCCCCce
Q 001531 739 PS-THGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGM 806 (1058)
Q Consensus 739 Pn-~~G~i~~d---I~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~--------GaDi~~~s~hKtf~~P~g~GGPg~ 806 (1058)
-. ..|.+.++ +++|.++|++||+++++|+++ .|+ +.|.+ -+|++++ .|.+ ++|-| +
T Consensus 171 i~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~----tG~-RtG~~~a~~~~gv~PDiv~~--gK~l----ggG~P-~ 238 (364)
T PRK04013 171 IQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQ----SGL-RTGKFLAIEHYKVEPDIVTM--GKGI----GNGVP-V 238 (364)
T ss_pred CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh----hcC-CCCchhHHHhcCCCCCEEEe--cccc----cCCce-e
Confidence 43 45666545 999999999999999999985 466 66653 3688876 4766 44445 5
Q ss_pred eEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHH
Q 001531 807 GPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRL 886 (1058)
Q Consensus 807 G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L 886 (1058)
|.+..++++.+ +. ..+++.|+++.++++.+.|..+-++++.+.++.. + ..|
T Consensus 239 ~a~~~~~~~~~---~~-------------------~~~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~~------l-~~l 289 (364)
T PRK04013 239 SLTLTNFDVER---GK-------------------HGSTFGGNPLACKAVAVTLRILRRERLVEKAGEK------F-IEI 289 (364)
T ss_pred EEEEecccccC---CC-------------------cCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHH------H-HHh
Confidence 55656655421 10 0112456778888889999999888876655432 2 223
Q ss_pred hc-c-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHH
Q 001531 887 EK-H-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDA 964 (1058)
Q Consensus 887 ~~-~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~a 964 (1058)
.. . .+ ..|. | .+. -+.+. .....+.+.+.++|+.+.... .+.+|+.|+...|++|+|.+++.
T Consensus 290 ~~~~v~~--vRG~-G-l~~--gve~~-------~~~~~i~~~~~~~Gll~~~~g---~~vlr~~Ppl~it~~~i~~~~~~ 353 (364)
T PRK04013 290 KGERVVT--TRGR-G-LMI--GIVLK-------KPVGKYVEELQNRGYLVHTAG---QRVIRLLPPLIISKDTMEEAKSA 353 (364)
T ss_pred ccCccee--eeeC-c-EEE--EEEeC-------CcHHHHHHHHHhCCcEEeeCC---CCEEEEeCCcccCHHHHHHHHHH
Confidence 22 1 11 2231 2 222 23332 125678999999999875332 37899999999999999999999
Q ss_pred HHHHHHHH
Q 001531 965 LISIREEI 972 (1058)
Q Consensus 965 L~~i~~e~ 972 (1058)
|.+++.++
T Consensus 354 l~~~l~~~ 361 (364)
T PRK04013 354 IEGVINDI 361 (364)
T ss_pred HHHHHHHH
Confidence 99988764
No 310
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.61 E-value=2e-13 Score=159.45 Aligned_cols=213 Identities=20% Similarity=0.217 Sum_probs=152.9
Q ss_pred HHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---h
Q 001531 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 289 (1058)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~---~ 289 (1058)
..++++.+|++.|.+. +.++.+|++++.++++++ . ++||+||++...|+++...+...++..|++++.++. +
T Consensus 63 ~~~Le~~lA~~~g~~~--~i~~~sG~~Ai~~~l~al-l--~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~d~e 137 (388)
T PRK07811 63 RTALEEQLAALEGGAY--GRAFSSGMAATDCLLRAV-L--RPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLSDLD 137 (388)
T ss_pred HHHHHHHHHHHhCCCc--eEEeCCHHHHHHHHHHHH-h--CCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCCCHH
Confidence 4467789999999886 566788898888888776 3 389999999999998888776666778999998775 4
Q ss_pred hhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCC
Q 001531 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1058)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1058)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|| +..+.+....|..+|+||+++|. |.|++| |
T Consensus 138 ~l~~~i~~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD-~a~a~~~~~~p~~~gaDivv~S~sK~l~g~---~ 213 (388)
T PRK07811 138 AVRAAITPRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVD-NTFASPYLQQPLALGADVVVHSTTKYIGGH---S 213 (388)
T ss_pred HHHHhcCcCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEE-CCCCccccCCchhhCCcEEEecCceeecCC---C
Confidence 5555 7789999999998 68999999999999999999999994 56666666667788999999998 877533 1
Q ss_pred CCceEEEEEeh-hhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHH
Q 001531 367 GPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1058)
Q Consensus 367 GP~~G~l~~~~-~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ 445 (1058)
+--+|++++++ ++.+++. ..|..-+ .+. .++ .+ |+...+-+-+..
T Consensus 214 ~~~gG~vv~~~~~l~~~~~-------------------------~~~~~~g---~~~-s~~---~a--~l~~~~L~tl~~ 259 (388)
T PRK07811 214 DVVGGALVTNDEELDEAFA-------------------------FLQNGAG---AVP-GPF---DA--YLTLRGLKTLAV 259 (388)
T ss_pred CcEEEEEEECCHHHHHHHH-------------------------HHHHhcC---CCC-CHH---HH--HHHHhccCcHHH
Confidence 11147777754 4433321 0001001 000 111 11 223444445666
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeE
Q 001531 446 IAQRVHGLAGTFALGLKKLGTVE 468 (1058)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~G~~~ 468 (1058)
..++..+++..+++.|++.++++
T Consensus 260 R~~~~~~na~~la~~L~~~p~v~ 282 (388)
T PRK07811 260 RMDRHSENAEAVAEFLAGHPEVS 282 (388)
T ss_pred HHHHHHHHHHHHHHHHHhCCCee
Confidence 66777789999999999885565
No 311
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.61 E-value=6.7e-14 Score=170.18 Aligned_cols=271 Identities=14% Similarity=0.119 Sum_probs=191.6
Q ss_pred HHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--
Q 001531 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 288 (1058)
Q Consensus 211 ~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~-- 288 (1058)
..+.+.|+.+|+++|++.+.. +++|+|.++.++++|.. ++||+||+++++|.|+...+.. .|++.+++.+
T Consensus 195 G~i~eAe~~aA~~fgAd~tyf-vvNGTS~~n~av~~a~~---~~Gd~VLvdRN~HKSv~~aLil----sga~PVYl~P~~ 266 (713)
T PRK15399 195 GPHLEAEEYIARTFGAEQSYI-VTNGTSTSNKIVGMYAA---PAGSTLLIDRNCHKSLAHLLMM----SDVVPIWLKPTR 266 (713)
T ss_pred hHHHHHHHHHHHHhCCCcEEE-EeCChHHHHHHHHHHhc---CCCCEEEeecccHHHHHHHHHH----cCCeeEEecccc
Confidence 468899999999999998655 77888999999999873 3899999999999999987642 4888888643
Q ss_pred ----------------hhhhc-c--CCCE---eEEEEEcCCCceeeccHHHHHHHHHhcCcEE-EEEecccc-c----cC
Q 001531 289 ----------------KDIDY-K--SGDV---CGVLVQYPGTEGEVLDYGDFIKNAHANGVKV-VMATDLLA-L----TI 340 (1058)
Q Consensus 289 ----------------~~l~~-l--~~~t---~~V~v~~pn~~G~i~dl~~I~~~a~~~gall-iV~a~~~s-l----g~ 340 (1058)
+.+++ + .++. +++++|+|||+|.+.|+++|++++ |+.+ +|+ ++|. + ..
T Consensus 267 n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~yd~~~I~~~~---g~~~ilvD-EAhgah~~F~p~ 342 (713)
T PRK15399 267 NALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTL---DVPSIHFD-SAWVPYTHFHPI 342 (713)
T ss_pred cccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceeeCHHHHHHHh---CCCEEEEe-ccchhhhhcCcc
Confidence 23333 3 2344 689999999999999999999999 6766 473 3331 1 11
Q ss_pred CC--CCCcc--cceEE---EecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeeccccccccc
Q 001531 341 LK--PPGEL--GADIV---VGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIR 412 (1058)
Q Consensus 341 l~--~p~~~--GaDiv---vgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~ir 412 (1058)
++ .+-.. |+|.+ +.|. |.++. ++ ++++++++.. + | |-|
T Consensus 343 ~~~~sam~~~~~aD~~i~~tQStHKtL~a-lT----QaS~iHvk~~----v---------d----------------~~~ 388 (713)
T PRK15399 343 YQGKSGMSGERVPGKVIFETQSTHKMLAA-FS----QASLIHIKGE----Y---------D----------------EET 388 (713)
T ss_pred cCCcChhhCCCCCCeeeeeeeehhccccc-cc----hheeeeecCC----C---------C----------------HHH
Confidence 22 11112 58888 8888 66653 22 4578877542 1 1 000
Q ss_pred ccccCCCccchhHHHHHHHHHH--HHHhC-cccHHHHHHHHHHHHHHHHHHHhcCCC------eEEcCC-----------
Q 001531 413 RDKATSNICTAQALLANMAAMY--AVYHG-PEGLKTIAQRVHGLAGTFALGLKKLGT------VEVQGL----------- 472 (1058)
Q Consensus 413 RekaTsni~t~~~l~a~~Aa~y--l~~~g-~~Gl~~ia~~~~~~a~~l~~~L~~~G~------~~l~~~----------- 472 (1058)
...+-.-.-|+++.|.++|++- ..++. +.| +++.++..+++..+++.|.++++ |+++.+
T Consensus 389 ~n~a~~m~~STSPsY~LmASLD~a~~~m~~~~G-~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l 467 (713)
T PRK15399 389 FNEAFMMHTSTSPSYPIVASVETAAAMLRGNPG-KRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPV 467 (713)
T ss_pred HHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceec
Confidence 1111122335688899999883 23343 345 55778888899999999988764 455421
Q ss_pred ----C------------CccE--EEEecC-----------C--HHHHHHHHHHcCceeeeccCCeEEEEeccCCCHHHHH
Q 001531 473 ----P------------FFDT--VKVKCA-----------D--AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVD 521 (1058)
Q Consensus 473 ----~------------~~~~--v~i~~~-----------~--~~~l~~~L~~~GI~~~~~~~~~lris~~~~~t~edid 521 (1058)
. ..|+ ++|.++ + +..+.+.|.++||.+...+...+++.++..+|+++++
T Consensus 468 ~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~~ 547 (713)
T PRK15399 468 APGEQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAM 547 (713)
T ss_pred CCCcccccccccccccccCCCceEEEEecCcccccccccCCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHH
Confidence 0 2243 445443 3 6789999999999999988899999999999999999
Q ss_pred HHHHHHh
Q 001531 522 KLFIVFA 528 (1058)
Q Consensus 522 ~ll~al~ 528 (1058)
+|+++|.
T Consensus 548 ~L~~aL~ 554 (713)
T PRK15399 548 GLLRGLT 554 (713)
T ss_pred HHHHHHH
Confidence 9999986
No 312
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.61 E-value=9.4e-14 Score=161.57 Aligned_cols=212 Identities=20% Similarity=0.201 Sum_probs=155.6
Q ss_pred HHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---hh
Q 001531 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1058)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~---~~ 290 (1058)
.++++.+|++.|.+ ++.++.||++++.++++++ . ++||+|+++...|+.+...+....+..|+++..++. ++
T Consensus 56 ~~Le~~lA~leg~e--~ivvt~gg~~Ai~~~l~al-l--~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~ 130 (388)
T PRK08861 56 GLLEQTLSELESGK--GAVVTNCGTSALNLWVSAL-L--GPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQSDAAA 130 (388)
T ss_pred HHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHH-c--CCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECCCCHHH
Confidence 34668999999965 4888999999999888876 3 389999999999998888776656667899988765 45
Q ss_pred hhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCCC
Q 001531 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1058)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~GG 367 (1058)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|| +.++.++...|-++|||++++|+ |++++|..
T Consensus 131 l~~~i~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvD-ea~~~~~~~~pl~~GaDivv~S~tK~l~G~~d--- 206 (388)
T PRK08861 131 LDAALAKKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVD-NTFLTPVLQKPLELGADFVIHSTTKYINGHSD--- 206 (388)
T ss_pred HHHhcCcCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEE-CCccccccCCCcccCCCEEEeecceeccCCCc---
Confidence 555 7789999999998 78999999999999999999999994 56677767778889999999999 77764421
Q ss_pred CceEEEEEeh-hhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHH
Q 001531 368 PHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1058)
Q Consensus 368 P~~G~l~~~~-~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~i 446 (1058)
--+|++.+++ ++.+++. ..|..-|. . .++. ..|+...|-+-|.-.
T Consensus 207 ~~gG~i~~~~~~~~~~~~-------------------------~~~~~~G~--~--~~p~-----~a~l~~rgl~Tl~lR 252 (388)
T PRK08861 207 VIGGVLITKTKEHAEELA-------------------------WWGNCIGA--T--GTPF-----DSYMTLRGIRTLGAR 252 (388)
T ss_pred ceeEEEEecHHHHHHHHH-------------------------HHHhccCC--C--CChH-----HHHHHHhcCCCHHHH
Confidence 1246776654 3332220 01111110 0 0111 123566666667777
Q ss_pred HHHHHHHHHHHHHHHhcCCCeE
Q 001531 447 AQRVHGLAGTFALGLKKLGTVE 468 (1058)
Q Consensus 447 a~~~~~~a~~l~~~L~~~G~~~ 468 (1058)
.++..++|..+++.|++.+.++
T Consensus 253 ~~~~~~~a~~~a~~L~~~p~v~ 274 (388)
T PRK08861 253 MRVHEESAQQILAYLQTQSLVG 274 (388)
T ss_pred HHHHHHHHHHHHHHHHhCCCee
Confidence 7888899999999999886453
No 313
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.61 E-value=9.2e-14 Score=161.95 Aligned_cols=212 Identities=22% Similarity=0.206 Sum_probs=152.1
Q ss_pred HHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--hh
Q 001531 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--KD 290 (1058)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~--~~ 290 (1058)
..++++.+|+++|.+. +.++.+|++++.++++++ . ++||+|+++...|+++...++.+ +..|++++.+++ ++
T Consensus 55 ~~~lE~~lA~l~g~~~--~l~~~sG~~Ai~~~l~~l-l--~~GD~Vlv~~~~y~~~~~~~~~~-~~~g~~v~~~~~d~~~ 128 (385)
T PRK08574 55 LRPLEEALAKLEGGVD--ALAFNSGMAAISTLFFSL-L--KAGDRVVLPMEAYGTTLRLLKSL-EKFGVKVVLAYPSTED 128 (385)
T ss_pred HHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHH-h--CCCCEEEEcCCCchhHHHHHHHh-hccCcEEEEECCCHHH
Confidence 3457899999999864 678899999888877765 2 38999999999999999888764 567998887654 56
Q ss_pred hhc-cCC-CEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCC
Q 001531 291 IDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1058)
Q Consensus 291 l~~-l~~-~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1058)
+++ +++ ++++|++.+| |++|.+.|+++|+++||++|++++|| +.++.++...|.++|+|++++|. |.|++| |
T Consensus 129 l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD-~t~a~~~~~~~l~~GaDivv~S~sK~l~g~---~ 204 (385)
T PRK08574 129 IIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVD-NTFATPLLYRPLRHGADFVVHSLTKYIAGH---N 204 (385)
T ss_pred HHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEE-CCCCccccCChhhhCCcEEEeeCceeecCC---C
Confidence 776 776 8999999887 78999999999999999999999994 56677766667789999999998 877644 2
Q ss_pred CCceEEEEE-ehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHH
Q 001531 367 GPHAAFLAT-SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1058)
Q Consensus 367 GP~~G~l~~-~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ 445 (1058)
..-+|.+.+ ++++.+++- ..|+..|+. . +++ .| |+...+-+-+..
T Consensus 205 d~~gG~vi~~~~~~~~~~~-------------------------~~~~~~g~~-~---~p~---~a--~l~l~~l~tL~~ 250 (385)
T PRK08574 205 DVVGGVAVAWSGEFLEELW-------------------------EWRRRLGTI-M---QPF---EA--YLVLRGLKTLEV 250 (385)
T ss_pred CceeEEEEECcHHHHHHHH-------------------------HHHHhcCCC-C---CHH---HH--HHHHcccCcHHH
Confidence 222464444 455443330 001111110 0 111 12 234445555666
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeE
Q 001531 446 IAQRVHGLAGTFALGLKKLGTVE 468 (1058)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~G~~~ 468 (1058)
..++..+++.++++.|++.+.++
T Consensus 251 R~~~~~~na~~la~~L~~~p~v~ 273 (385)
T PRK08574 251 RFERQCRNAMAIAEFLSEHPKVA 273 (385)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcC
Confidence 66777889999999999875443
No 314
>PLN02187 rooty/superroot1
Probab=99.61 E-value=2.7e-13 Score=161.80 Aligned_cols=344 Identities=14% Similarity=0.140 Sum_probs=199.3
Q ss_pred CcccccccccccCCcc----cccccc-----cccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCC--CceeeecCc
Q 001531 588 CHSMIPLGSCTMKLNA----TTEMMP-----VTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGF--DSFSLQPNA 656 (1058)
Q Consensus 588 ~~~~i~lGs~t~~~~~----~~~~~~-----~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~--~~~~l~~~s 656 (1058)
...+++||.+.+.+.+ ..+... +..+... .|.| .+|..++...+.+++.+-.|. +...+..++
T Consensus 65 ~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~---~Y~~---~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~ 138 (462)
T PLN02187 65 NKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGN---SYGP---GAGILPARRAVADYMNRDLPHKLTPEDIFLTA 138 (462)
T ss_pred CCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCC---CCCC---CCChHHHHHHHHHHHHHhcCCCCCcccEEEeC
Confidence 4568899988765221 111111 1112222 3433 457666555556666554443 444555555
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCC--CCCCCHHHHHHHHHhcCCCeEEE
Q 001531 657 GAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA--KGNINIEELRKAAEANRDNLSTL 734 (1058)
Q Consensus 657 Ga~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~--~g~iD~e~L~~~i~~~~~~taaV 734 (1058)
|++. ++.++++.+. .++++|+++++.+..+...+...|++++.++..+ +..+|+++|+++++ ++++++
T Consensus 139 G~~~--al~~~~~~l~-----~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~---~~~~~v 208 (462)
T PLN02187 139 GCNQ--GIEIVFESLA-----RPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIAD---ENTVAM 208 (462)
T ss_pred CHHH--HHHHHHHHhc-----CCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcC---CCcEEE
Confidence 5542 3333444432 2568899998877666667889999999998753 46799999999886 788999
Q ss_pred EEEcCC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCccc-ccCcC-CC-CccCC--c-EEEeCCccccccCCCCCCCc
Q 001531 735 MVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVGLT-SP-GYIGA--D-VCHLNLHKTFCIPHGGGGPG 805 (1058)
Q Consensus 735 ~vt~Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~a-l~gl~-~p-g~~Ga--D-i~~~s~hKtf~~P~g~GGPg 805 (1058)
++++|| .+|.+- +.+++|+++|+++|+++++|+++..- +.+-. .+ ..+.. . |++.++.|+|++| |.+
T Consensus 209 ~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~p----GlR 284 (462)
T PLN02187 209 VVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVP----GWK 284 (462)
T ss_pred EEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCc----cce
Confidence 999995 789874 35899999999999999999986421 11110 01 11111 1 4556788888755 899
Q ss_pred eeEEEEeC-C-CC---CCCCCCCcccCCCCCCCCCCCCCCCC--CccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHH
Q 001531 806 MGPIGVKK-H-LA---PFLPSHPVVSTGGIPAPEKSQPLGTI--AAAPWGSALILPISYTYIAMMGSKGLTEASKIAILN 878 (1058)
Q Consensus 806 ~G~i~~~~-~-l~---~~lpg~~vg~~~d~g~~~~~~~t~~i--~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~ 878 (1058)
+|++++.+ + +. ..+-. .+...++ +.+...+.+ +.+++.....+-+++..+...++
T Consensus 285 iG~~v~~~p~~~~~~~~~~~~--------------~~~~~~~~~~~s~~~Q~a----~~~~L~~~~~~~l~~~~~~l~~~ 346 (462)
T PLN02187 285 IGWIALNDPEGVFETTKVLQS--------------IKQNLDVTPDPATIIQAA----LPAILEKADKNFFAKKNKILKHN 346 (462)
T ss_pred eEEEEecCchhHHHHHHHHHH--------------HHHhccccCCCCHHHHHH----HHHHHhcCcHHHHHHHHHHHHHH
Confidence 99999842 2 11 11100 0000111 111122221 22222221233455566666678
Q ss_pred HHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCC-CHHHHHHHH-HHCCccc-cCCCCCCCCEEEEEcCCCCC
Q 001531 879 ANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGI-EPEDVAKRL-MDYGFHG-PTMSWPVPGTLMIEPTESES 954 (1058)
Q Consensus 879 a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~-~~~~v~k~L-~~~Gi~~-~~~~~p~~~~Lris~te~~t 954 (1058)
.+++.+.|+++ ....+..+.+..+ ++++++.-. ..++ +..++..+| .++|+.+ +...|...+.+||+++. .
T Consensus 347 r~~l~~~L~~~~~~~~~~~P~gg~f--l~~~l~~~~-~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~--~ 421 (462)
T PLN02187 347 VDLVCDRLKDIPCVVCPKKPESCTY--LLTKLELSL-MDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGV--E 421 (462)
T ss_pred HHHHHHHHhhCCCCcCCCCCCEeEE--EEeecChhh-CCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCC--C
Confidence 88899999875 1111112223222 334432100 0122 344555554 6889875 33345446899999974 4
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 001531 955 KEELDRYCDALISIREEIAQ 974 (1058)
Q Consensus 955 ~eeid~fi~aL~~i~~e~~~ 974 (1058)
.+.++..++.|.++++..++
T Consensus 422 ~e~l~~al~rL~~~l~~~~~ 441 (462)
T PLN02187 422 AHMLEDALERLKGFCTRHAK 441 (462)
T ss_pred HHHHHHHHHHHHHHHHHhhh
Confidence 77888888888887765544
No 315
>PRK06062 hypothetical protein; Provisional
Probab=99.61 E-value=2.5e-13 Score=161.40 Aligned_cols=329 Identities=14% Similarity=0.157 Sum_probs=200.5
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCC--CceeeecCchHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGF--DSFSLQPNAGAAGEYAGLMVIR 669 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~--~~~~l~~~sGa~ge~a~llair 669 (1058)
..+|+|.+++..++..+. ....+.. +.+. .+...++.+.|++++.. +. .++.++|++++++++..+|
T Consensus 65 ~~lGh~~p~v~~Ai~~q~-~~~~~~~-~~~~--------~~~~~~lae~L~~~~p~~~~~-v~f~~SGsEAve~AlklAr 133 (451)
T PRK06062 65 TNIGHQHPKVVAAIQEQA-ARLCTVA-PAHA--------NDARSEAARLIAERAPGDLSK-VFFTNGGADANEHAVRMAR 133 (451)
T ss_pred hcCCCCCHHHHHHHHHHH-HhcCCcC-CccC--------CHHHHHHHHHHHHhCCCCCCE-EEEcCChHHHHHHHHHHHH
Confidence 457888887777666652 2211111 1111 12245788889998753 33 4678899999988888888
Q ss_pred HHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCCc-----------EEEEEcCCCCCC------CC-------HHHHHHHH
Q 001531 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-----------KIVSVGTDAKGN------IN-------IEELRKAA 724 (1058)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G~-----------~vv~V~~d~~g~------iD-------~e~L~~~i 724 (1058)
.|. +|++|| ...++||....+....|- .+..++.....+ .| +++|++++
T Consensus 134 ~~t------gr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l 207 (451)
T PRK06062 134 LHT------GRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVI 207 (451)
T ss_pred Hhh------CCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHH
Confidence 762 345555 467899987666443221 122332211111 23 68888888
Q ss_pred Hhc-CCCeEEEEEEcC-CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc--------CCcEEEeCC
Q 001531 725 EAN-RDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNL 791 (1058)
Q Consensus 725 ~~~-~~~taaV~vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~--------GaDi~~~s~ 791 (1058)
+.+ .+++++|+++.- +..|++.+ .+++|.++|+++|+++|+|+++ .|+.+.|.+ -+|++++
T Consensus 208 ~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~----tGfGRtG~~~a~~~~gv~PDi~t~-- 281 (451)
T PRK06062 208 ELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVM----AGFGRTGKWFAIEHFGVVPDLITF-- 281 (451)
T ss_pred HhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccc----cCCCcCcHHHHHHhcCCCCCeeee--
Confidence 654 257888887653 34577652 3999999999999999999984 456666543 3688765
Q ss_pred ccccccCCCCCC-CceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHH
Q 001531 792 HKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1058)
Q Consensus 792 hKtf~~P~g~GG-Pg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1058)
.|.++ +|- | +|.+++++++++.+....+ ..+ + ++.|+++.++++.+.|..+-.+++.+
T Consensus 282 gK~lg----gG~~P-igav~~~~~i~~~~~~~~~-------------~~~--~-T~~gnpl~~Aaa~a~L~~l~~~~l~~ 340 (451)
T PRK06062 282 AKGVN----SGYVP-LGGVAISEAIAATFADRPY-------------PGG--L-TYSGHPLACAAAVATINAMEEEGIVE 340 (451)
T ss_pred chhhh----cCCcC-cEEEEEcHHHHHHhccCCC-------------CCC--C-CCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 47663 332 5 4556666666654421100 001 1 23456777888888888887766554
Q ss_pred HHHHHHHHH-HHHHHHHhcc---CCee--eccCCCccceEEEEecccccccCCC--------CHHHHHHHHHHCCccccC
Q 001531 871 ASKIAILNA-NYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGI--------EPEDVAKRLMDYGFHGPT 936 (1058)
Q Consensus 871 ~a~~~~~~a-~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~~~~~~g~--------~~~~v~k~L~~~Gi~~~~ 936 (1058)
.++ ... .+|.++|+++ ++++ ..|. |. +.-+-+..++-.. ... ....+.+.|.++|+.+..
T Consensus 341 ~~~---~~G~~~l~~~L~~l~~~~~~v~~vrG~-Gl-~~gve~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~ 414 (451)
T PRK06062 341 NAA---RIGAEVLGPGLRELAERHPSVGEVRGL-GV-FWALELVADRETR-EPLAPYGASSAAMAAVKAACKERGLLPFV 414 (451)
T ss_pred HHH---HHHHHHHHHHHHHHHhcCCcEEeEecc-cc-EEEEEEccccccc-CCCcccchhhHHHHHHHHHHHHCCcEEee
Confidence 433 343 4677777654 3321 2232 32 2222221110000 000 135788899999998632
Q ss_pred CCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001531 937 MSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1058)
Q Consensus 937 ~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~~ 974 (1058)
..+.+|++|+..+|++|||++++++.+++.+++.
T Consensus 415 ----~~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~~ 448 (451)
T PRK06062 415 ----NGNRIHVVPPCTVTEDEVREGLAILDAALAVADA 448 (451)
T ss_pred ----cCCEEEEECCccCCHHHHHHHHHHHHHHHHHhhh
Confidence 2478999999999999999999999999887654
No 316
>PRK07480 putative aminotransferase; Validated
Probab=99.61 E-value=3e-13 Score=160.79 Aligned_cols=343 Identities=18% Similarity=0.201 Sum_probs=204.2
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCCc-eeeecCchHHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRA 670 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~~-~~l~~~sGa~ge~a~llair~ 670 (1058)
..+|+|.+.+..++..+. ....+.. .+ .+...+...++.+.|+++++.+. ..++.++|++++++++.++|.
T Consensus 62 ~~lGh~~p~v~~Ai~~q~-~~~~~~~--~~-----~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~ 133 (456)
T PRK07480 62 VNVGYGRKELADAAARQM-RELPYYN--TF-----FKTTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRH 133 (456)
T ss_pred hcCCCCCHHHHHHHHHHH-HhcCCcc--cc-----cccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHH
Confidence 457888777766666552 2211111 00 00111334578888999885321 246688999999999999999
Q ss_pred HHHHcCCCCCCEEEE-cCCCCCccHHHHHhCCc------------EEEEEcCCCCC----CCC--------HHHHHHHHH
Q 001531 671 YHKARGDHHRNVCII-PVSAHGTNPATAAMCGM------------KIVSVGTDAKG----NIN--------IEELRKAAE 725 (1058)
Q Consensus 671 y~~~~G~~~r~~Vli-p~saHg~~pa~a~~~G~------------~vv~V~~d~~g----~iD--------~e~L~~~i~ 725 (1058)
|...+|..+|++||. ..++||..-......|. .+..++..... ..+ +++|++.+.
T Consensus 134 ~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~ 213 (456)
T PRK07480 134 YWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKIL 213 (456)
T ss_pred HHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHH
Confidence 876666545666664 67899976443322221 12223321100 011 366665553
Q ss_pred -hcCCCeEEEEEEcC-CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc------C--CcEEEeCCc
Q 001531 726 -ANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNLH 792 (1058)
Q Consensus 726 -~~~~~taaV~vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~------G--aDi~~~s~h 792 (1058)
...+++++|+++.- ...|++.+ .+++|.++|++||+++|+|++ +.|+.+.|.+ | +|++++ .
T Consensus 214 ~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV----~tGfGRtG~~~a~~~~gv~PDiv~~--g 287 (456)
T PRK07480 214 ELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEV----ICGFGRTGEWFGSQHFGIKPDLMTI--A 287 (456)
T ss_pred hcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEech----hhCCCcCcchhhhhhcCCCCCeeee--e
Confidence 23468888888753 34577652 389999999999999999998 4566666643 2 588776 4
Q ss_pred cccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHH
Q 001531 793 KTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEAS 872 (1058)
Q Consensus 793 Ktf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a 872 (1058)
|.++ +|--.+|.+++++++++.+.... + . ....+++.|+++.++++.+.|..+-++++.+.+
T Consensus 288 K~l~----gG~~Pi~av~~~~~i~~~~~~~~-~------------~-~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~ 349 (456)
T PRK07480 288 KGLT----SGYIPMGAVGVGDRVAEVLIEEG-G------------E-FNHGFTYSGHPVAAAVALANLRILRDEGIVERV 349 (456)
T ss_pred hhhc----cCCccceEEEEcHHHHHHHhcCC-C------------C-cccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHH
Confidence 7663 33213666677777655431000 0 0 001112446778888889999888777755433
Q ss_pred HHHHHHHHHHHHHHhcc--CCee--eccCCCccceEEEEecccccccC--C--CCHHHHHHHHHHCCccccCCCCCCCCE
Q 001531 873 KIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTA--G--IEPEDVAKRLMDYGFHGPTMSWPVPGT 944 (1058)
Q Consensus 873 ~~~~~~a~yL~~~L~~~--~~v~--~~g~~~~~~~e~vv~~~~~~~~~--g--~~~~~v~k~L~~~Gi~~~~~~~p~~~~ 944 (1058)
+ ....++|.++|++. ++++ +.|. |. +.-+-+.-+.-..+. . .....+.+++.++|+.+... .+.
T Consensus 350 ~--~~~g~~l~~~l~~l~~~~~i~~vrG~-Gl-m~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----~~~ 421 (456)
T PRK07480 350 R--DDTGPYLQKRLRELADHPLVGEVRGV-GL-VGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAV----GDR 421 (456)
T ss_pred H--HHHHHHHHHHHHHhhcCCCeeeEEee-cc-eEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeec----CCE
Confidence 1 24456777777653 3321 2332 32 222222111000000 0 01246778889999987532 378
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001531 945 LMIEPTESESKEELDRYCDALISIREEIAQ 974 (1058)
Q Consensus 945 Lris~te~~t~eeid~fi~aL~~i~~e~~~ 974 (1058)
++++|+...|++|||+++++|.+++.++++
T Consensus 422 l~~~Ppl~it~~eid~~~~~l~~al~~~~~ 451 (456)
T PRK07480 422 MIISPPLVITHAEIDELVEKARKALDATAA 451 (456)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988744
No 317
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.61 E-value=3.7e-14 Score=172.40 Aligned_cols=272 Identities=13% Similarity=0.115 Sum_probs=192.0
Q ss_pred HHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--
Q 001531 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 288 (1058)
Q Consensus 211 ~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~-- 288 (1058)
..+.+.|+.+|+++|++.+.. +++|+|+++.++++++. ++||+||+++++|.|+...+.. .|++.+++.+
T Consensus 195 G~i~eAe~~AA~~fgAd~tyf-vvNGTS~~n~av~~a~~---~~Gd~VLvdRN~HKSv~haLil----sga~PVYl~P~r 266 (714)
T PRK15400 195 GPHKEAEEYIARVFNADRSYM-VTNGTSTANKIVGMYSA---PAGSTVLIDRNCHKSLTHLMMM----SDVTPIYFRPTR 266 (714)
T ss_pred hHHHHHHHHHHHHhCCCcEEE-EeCchHHHHHHHHHHhc---CCCCEEEeecccHHHHHHHHHH----cCCeEEEecccc
Confidence 467899999999999998655 77888999999998873 3899999999999999987642 4888887643
Q ss_pred ----------------hhhhc-c--CCCEe---EEEEEcCCCceeeccHHHHHHHHHhcCcEEEEEeccc-cc----cCC
Q 001531 289 ----------------KDIDY-K--SGDVC---GVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLL-AL----TIL 341 (1058)
Q Consensus 289 ----------------~~l~~-l--~~~t~---~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~-sl----g~l 341 (1058)
+.+++ + .++.+ ++++|+|||+|.+.|+++|++++|.++ ++|+ ++| ++ ..+
T Consensus 267 n~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYdG~~yd~~~I~~~~~~~~--ilvD-EAwgah~~F~p~~ 343 (714)
T PRK15400 267 NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFD-SAWVPYTNFSPIY 343 (714)
T ss_pred cccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCCccEecCHHHHHHHhCCCC--EEEE-ccchhhhccCccc
Confidence 23333 3 23444 799999999999999999999999988 4673 222 11 122
Q ss_pred C--CCCcccc---e--EEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccc
Q 001531 342 K--PPGELGA---D--IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRR 413 (1058)
Q Consensus 342 ~--~p~~~Ga---D--ivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irR 413 (1058)
+ .+-..|+ | +++.|. |.++. ++ ++++++++.. + | |.|.
T Consensus 344 ~~~sam~~ga~~~~~i~vtQStHKtL~a-lT----QaS~LHvkg~----v---------d----------------~~~~ 389 (714)
T PRK15400 344 EGKCGMSGGRVEGKVIYETQSTHKLLAA-FS----QASMIHVKGD----V---------N----------------EETF 389 (714)
T ss_pred CCcChhhcCCCCCCceEEEEchhhcccc-hh----HHhHHHHcCC----C---------C----------------HHHH
Confidence 2 2234677 5 999999 66653 22 2345544321 1 1 0011
Q ss_pred cccCCCccchhHHHHHHHHHH--HHHhC-cccHHHHHHHHHHHHHHHHHHHhcCCC------eEEcCCC-----------
Q 001531 414 DKATSNICTAQALLANMAAMY--AVYHG-PEGLKTIAQRVHGLAGTFALGLKKLGT------VEVQGLP----------- 473 (1058)
Q Consensus 414 ekaTsni~t~~~l~a~~Aa~y--l~~~g-~~Gl~~ia~~~~~~a~~l~~~L~~~G~------~~l~~~~----------- 473 (1058)
+.+=.-.-|+++.+.++|++- ..++. +.| +++.++..+.+..+++.|.++.+ ++++.+.
T Consensus 390 n~a~~m~~STSPsY~l~ASLD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~ 468 (714)
T PRK15400 390 NEAYMMHTTTSPHYGIVASTETAAAMMKGNAG-KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLR 468 (714)
T ss_pred HHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccC
Confidence 112222335688899999883 23343 344 56778888999999999988865 5555211
Q ss_pred ----------------CccE--EEEecC-----------C--HHHHHHHHHHcCceeeeccCCeEEEEeccCCCHHHHHH
Q 001531 474 ----------------FFDT--VKVKCA-----------D--AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDK 522 (1058)
Q Consensus 474 ----------------~~~~--v~i~~~-----------~--~~~l~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ 522 (1058)
..|+ ++|.++ + +..+.+.|.++||.+...+...+++.++..+|++++++
T Consensus 469 p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~~~iLfl~s~g~t~~~~~~ 548 (714)
T PRK15400 469 SDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALS 548 (714)
T ss_pred ccccccCcccccccccccCCceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHH
Confidence 1243 444442 2 67899999999999999888999999999999999999
Q ss_pred HHHHHh
Q 001531 523 LFIVFA 528 (1058)
Q Consensus 523 ll~al~ 528 (1058)
|+++|.
T Consensus 549 L~~aL~ 554 (714)
T PRK15400 549 LLRALT 554 (714)
T ss_pred HHHHHH
Confidence 999996
No 318
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.60 E-value=1.6e-13 Score=159.47 Aligned_cols=291 Identities=16% Similarity=0.169 Sum_probs=179.9
Q ss_pred HHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCCC
Q 001531 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1058)
Q Consensus 635 ~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g~ 714 (1058)
.++++.+++.+|++...+..++|++..+. ++++.+. .+++.|+++...|..+...+.+.|.+++.+|.+.++
T Consensus 70 ~~Lr~~ia~~~~~~~~~I~it~G~~~~l~--~~~~~~~-----~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~~- 141 (369)
T PRK08153 70 HDLRHALAAHHGVAPENIMVGEGIDGLLG--LIVRLYV-----EPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDDR- 141 (369)
T ss_pred HHHHHHHHHHhCCCHHHEEEcCCHHHHHH--HHHHHhc-----CCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCCC-
Confidence 46788899999988767777777764322 2333221 256889998876655555577899999999987665
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHH--cCCEEEEeccCcc-cccCcCCC-CccCCc-EEE
Q 001531 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHD--NGGQVYMDGANMN-AQVGLTSP-GYIGAD-VCH 788 (1058)
Q Consensus 715 iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~--~g~lv~vD~a~~~-al~gl~~p-g~~GaD-i~~ 788 (1058)
+|++++.+++. .+++++|++++|+ ++|.+- +.+++.++++. +|+++++|+++.. ...+-..+ .....+ |+.
T Consensus 142 ~~~~~l~~~~~--~~~~~~i~l~~P~NPtG~~~-~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~ 218 (369)
T PRK08153 142 EDLDALLDAAR--RENAPLVYLANPDNPMGSWH-PAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRM 218 (369)
T ss_pred CCHHHHHHHhc--ccCCcEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEEE
Confidence 89999987774 2578889999995 689886 45555555443 3899999998631 11110001 011112 556
Q ss_pred eCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhH
Q 001531 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl 868 (1058)
.++.|+|++ .|.++|++++++++++.+-.. +...+++ . ....++.+++. ..+-+
T Consensus 219 ~SfSK~~g~----~GlRiG~~v~~~~~~~~l~~~--------------~~~~~~s--~----~~q~~~~~~l~--~~~~~ 272 (369)
T PRK08153 219 RTFSKAYGL----AGARVGYAIGAPGTIKAFDKV--------------RNHFGMN--R----IAQAAALAALK--DQAYL 272 (369)
T ss_pred ecchHhccC----cchheeeeecCHHHHHHHHHh--------------hcCCCCC--H----HHHHHHHHHhc--CHHHH
Confidence 667787754 478899999987665433100 0011111 1 12222233332 12334
Q ss_pred HHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccC-CCCCCCCEEE
Q 001531 869 TEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWPVPGTLM 946 (1058)
Q Consensus 869 ~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~-~~~p~~~~Lr 946 (1058)
++..+....+.+++.+.|++. +.+ + +.+..+ +.++++. .+..+..+.+.|.++||.+.. ...+..+.+|
T Consensus 273 ~~~~~~~~~~r~~~~~~L~~~g~~~-~--p~~~~f--~~~~~~~----~~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iR 343 (369)
T PRK08153 273 AEVVGKIAAARDRIAAIARANGLTP-L--PSATNF--VAIDCGR----DGAFARAVLDGLIARDIFVRMPGVAPLDRCIR 343 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCcc-C--CCcCcE--EEEECCC----CcccHHHHHHHHHHCCeEEeeCCCCCCCCeEE
Confidence 455555667777888888764 322 1 122222 3455431 124578899999999998732 1112347899
Q ss_pred EEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001531 947 IEPTESESKEELDRYCDALISIREEIAQ 974 (1058)
Q Consensus 947 is~te~~t~eeid~fi~aL~~i~~e~~~ 974 (1058)
|++. +++|+++|+++|++++...++
T Consensus 344 is~~---~~~~~~~~~~al~~~~~~~~~ 368 (369)
T PRK08153 344 VSCG---PDEELDLFAEALPEALEAARK 368 (369)
T ss_pred EecC---CHHHHHHHHHHHHHHHHHhhc
Confidence 9985 689999999999998876543
No 319
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.60 E-value=2.8e-13 Score=158.26 Aligned_cols=300 Identities=13% Similarity=0.118 Sum_probs=182.0
Q ss_pred hhcHHHHHHHHHHHHHHHhCCC--ceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEE
Q 001531 627 AQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1058)
Q Consensus 627 ~qG~~~~~~el~~~lael~G~~--~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~v 704 (1058)
.+|..++...+.+++.+..|+. ..++..++|++. +..++++.+. .++++|+++.+.++.+...+...|.++
T Consensus 65 ~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~--al~~~~~~~~-----~~gd~vlv~~p~y~~~~~~~~~~g~~~ 137 (384)
T PRK06348 65 SGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACH--GMYLALQSIL-----DPGDEVIIHEPYFTPYKDQIEMVGGKP 137 (384)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHH--HHHHHHHHhc-----CCCCEEEEeCCCCcchHHHHHHcCCEE
Confidence 3565555656666666555553 445555556542 3334444432 256789999887777777788899999
Q ss_pred EEEcCCC-C-CCCCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCccc-ccCcCC
Q 001531 705 VSVGTDA-K-GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVGLTS 778 (1058)
Q Consensus 705 v~V~~d~-~-g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~a-l~gl~~ 778 (1058)
+.++.++ + ..+|+++|+++++ +++++|++++|+ .+|.+- +++++|+++|+++|+++++|+++.-- ...-..
T Consensus 138 ~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~ 214 (384)
T PRK06348 138 IILETYEEDGFQINVKKLEALIT---SKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFV 214 (384)
T ss_pred EEecCCcCcCCcCCHHHHHHhhC---cCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCcc
Confidence 9998743 2 4699999999986 678889999995 688874 35899999999999999999986411 111001
Q ss_pred C-Cc----cCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHH
Q 001531 779 P-GY----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (1058)
Q Consensus 779 p-g~----~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~ 853 (1058)
+ .. .+-.|++.++.|+|+.| |-++|++.+++++...+-. . ......+.+...+.
T Consensus 215 ~~~~~~~~~~~vi~~~SfSK~~~l~----GlRiG~~v~~~~~~~~~~~-~-------------~~~~~~~~~~~~q~--- 273 (384)
T PRK06348 215 PMATLAGMPERTITFGSFSKDFAMT----GWRIGYVIAPDYIIETAKI-I-------------NEGICFSAPTISQR--- 273 (384)
T ss_pred chhhcCCCcCcEEEEecchhccCCc----cccceeeecCHHHHHHHHH-H-------------HHhccCCCCHHHHH---
Confidence 1 11 12236667888888544 6789999998765543310 0 00011121112222
Q ss_pred HHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHH-HCCc
Q 001531 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGF 932 (1058)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~-~~Gi 932 (1058)
++..++. ...+-+++..+....+.+++.+.|++...+.+..+++.++ ++++++. .+.+..++++.|. ++|+
T Consensus 274 -~~~~~l~-~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~--~~~~~~~----~~~~~~~l~~~l~~~~gv 345 (384)
T PRK06348 274 -AAIYALK-HRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIY--AFINIKK----TGLSSVEFCEKLLKEAHV 345 (384)
T ss_pred -HHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEE--EEEeccc----CCCCHHHHHHHHHHhCCE
Confidence 1122222 1222234444445566788888887642222222333332 4566541 1457788898876 5799
Q ss_pred ccc-CCCCCC--CCEEEEEcCCCCCHHHHHHHHHHHHH
Q 001531 933 HGP-TMSWPV--PGTLMIEPTESESKEELDRYCDALIS 967 (1058)
Q Consensus 933 ~~~-~~~~p~--~~~Lris~te~~t~eeid~fi~aL~~ 967 (1058)
.+. ...|.. .+.+||+++ .+.++++..++.|++
T Consensus 346 ~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~al~~l~~ 381 (384)
T PRK06348 346 LVIPGKAFGESGEGYIRLACT--VGIEVLEEAFNRIEK 381 (384)
T ss_pred EEcCchhhccCCCCeEEEEec--CCHHHHHHHHHHHHh
Confidence 753 333432 478999986 467777777766654
No 320
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.60 E-value=2.6e-13 Score=161.22 Aligned_cols=328 Identities=16% Similarity=0.138 Sum_probs=195.2
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCC--ceeeecCchHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIR 669 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~--~~~l~~~sGa~ge~a~llair 669 (1058)
..+|++.+++..++..+. ....+ ++... ...+...++.+.|+++++.. ...++.++|++++++++..+|
T Consensus 68 ~~lGh~~p~v~~ai~~q~-~~~~~--~~~~~------~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr 138 (443)
T PRK06058 68 TSVGNSAPRVVEAVREQV-ARFTH--TCFMV------TPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIAR 138 (443)
T ss_pred hccCCCCHHHHHHHHHHH-HhccC--ccccc------cCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHH
Confidence 357888777666665552 21111 11100 11133457888899988633 235778899999888888888
Q ss_pred HHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCC--------c-----EEEEEcCCCCCC------CC--------HHHHH
Q 001531 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG--------M-----KIVSVGTDAKGN------IN--------IEELR 721 (1058)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G--------~-----~vv~V~~d~~g~------iD--------~e~L~ 721 (1058)
.|. +|++|+ ...++||....+..+.+ + .+..+|.....+ .+ ++.++
T Consensus 139 ~~t------gr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 212 (443)
T PRK06058 139 SYT------GRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIE 212 (443)
T ss_pred Hhh------CCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHH
Confidence 762 245565 45688998766543322 1 123333211111 11 22233
Q ss_pred HHHHhcCCCeEEEEEEcCC-Cccccc---ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc--------CCcEEEe
Q 001531 722 KAAEANRDNLSTLMVTYPS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHL 789 (1058)
Q Consensus 722 ~~i~~~~~~taaV~vt~Pn-~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~--------GaDi~~~ 789 (1058)
+.+. .+++++|+++.-. ..|++. ..+++|.++|++||+++++|+++ .|+.+.|.+ -+|++++
T Consensus 213 ~~~~--~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~----tGfgRtG~~fa~~~~gv~PDiv~~ 286 (443)
T PRK06058 213 KQVG--ADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQ----TGFARTGAWFACEHEGIVPDLITT 286 (443)
T ss_pred HhhC--CCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc----cCCCcChhhhHHHhcCCCCCEEEE
Confidence 3332 3678888765432 456664 24999999999999999999984 456566532 2588877
Q ss_pred CCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHH
Q 001531 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1058)
Q Consensus 790 s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1058)
.|.++ ||-.+|.+++++++++.+.... ..+++.|+++.++++.+.|..+.++++.
T Consensus 287 --gK~l~-----~G~Pi~av~~~~~i~~~~~~~~------------------~~~T~~gnpl~~aaa~a~L~~~~~~~l~ 341 (443)
T PRK06058 287 --AKGIA-----GGLPLSAVTGRAEIMDAPHPGG------------------LGGTYGGNPVACAAALAAIETIEEDDLV 341 (443)
T ss_pred --ccccc-----CCCccEEEEEcHHHHhhccCCC------------------CCCCCCCCHHHHHHHHHHHHHHHHcCHH
Confidence 37763 3455788888877765542110 0112335667777788888887666554
Q ss_pred HHHHHHHHHHHHHHHHHhcc---CCee--eccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCE
Q 001531 870 EASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 944 (1058)
Q Consensus 870 ~~a~~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~ 944 (1058)
+ +.....++|.++|+++ ++++ +.|. |.++ -+.+.-...+.....-...+.++|.++|+.+.... +..+.
T Consensus 342 ~---~~~~~g~~l~~~L~~l~~~~~~i~~vrg~-G~~~-~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~-~~~~~ 415 (443)
T PRK06058 342 A---RARQIEALMTDRLRALAAEDDRIGDVRGR-GAMI-AIELVKPGTTEPDAELTKALAAAAHAAGVIVLTCG-TYGNV 415 (443)
T ss_pred H---HHHHHHHHHHHHHHHHHhhCCcEEeeecc-ceEE-EEEEecCCCCCCcHHHHHHHHHHHHHCCeEEeccC-CCCCE
Confidence 4 3445678888888764 3432 2332 3222 12121110000000113567788889999874322 12478
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 945 LMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 945 Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
||+.|+...|++|||+++++|.+++++
T Consensus 416 lr~~Ppl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 416 IRLLPPLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred EEEECCCccCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999988754
No 321
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.60 E-value=1.2e-13 Score=162.25 Aligned_cols=307 Identities=15% Similarity=0.134 Sum_probs=188.4
Q ss_pred hhcHHHHHHHHHHHHHHHhCCC--ceeeecCchH-HHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcE
Q 001531 627 AQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1058)
Q Consensus 627 ~qG~~~~~~el~~~lael~G~~--~~~l~~~sGa-~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~ 703 (1058)
.+|..++...+.+++++..|.. ..++..++|+ +|.. ++++.+. ++++.|++++..++.++..+...|.+
T Consensus 69 ~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~---~~~~~~~-----~~gd~vl~~~p~y~~y~~~~~~~~~~ 140 (402)
T PRK06107 69 VNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIF---LALMATL-----EAGDEVIIPAPYWVSYPDMVLANDGT 140 (402)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHH---HHHHHhc-----CCCCEEEEecCCCcCHHHHHHHcCCE
Confidence 3577777778888888888875 3345555554 4432 2233221 35688999998777777777888899
Q ss_pred EEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc--ccHHHHHHHHHHc-CCEEEEeccCcc-cccCc
Q 001531 704 IVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDN-GGQVYMDGANMN-AQVGL 776 (1058)
Q Consensus 704 vv~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~~-g~lv~vD~a~~~-al~gl 776 (1058)
++.++++.+ +.+|+++|+++++ +++++|++++|+ .+|..- +++++|+++|+++ |+++++|.++.. .+.+.
T Consensus 141 ~~~v~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~ 217 (402)
T PRK06107 141 PVIVACPEEQGFKLTPEALEAAIT---PRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDE 217 (402)
T ss_pred EEEecCCcccCCCCCHHHHHhhcC---cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCC
Confidence 888988643 4699999999986 688899999994 789774 2588999999998 999999997631 11111
Q ss_pred CCC--Cc----c-CCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhh
Q 001531 777 TSP--GY----I-GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (1058)
Q Consensus 777 ~~p--g~----~-GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~ 849 (1058)
..| .. + +--++..+++|+|+.| |-++|++.+++++...+... ......+.+...+
T Consensus 218 ~~~~~~~~~~~~~~~vi~~~S~SK~~~~p----GlRiG~~~~~~~~~~~~~~~--------------~~~~~~~~s~~~q 279 (402)
T PRK06107 218 PTPHLLAAAPELRDRVLVTNGVSKTYAMT----GWRIGYAAGPADLIAAINKL--------------QSQSSSCPSSISQ 279 (402)
T ss_pred CCCCHHHhCcCccCCEEEEeccchhhcCc----ccceeeeecCHHHHHHHHHH--------------HHhcccCCChHHH
Confidence 111 11 1 1235567789998654 67889999887665443210 0001111111122
Q ss_pred HHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccc---cCC---CCHHHH
Q 001531 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKN---TAG---IEPEDV 923 (1058)
Q Consensus 850 ~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~---~~g---~~~~~v 923 (1058)
.. +..++. -+..-+++..+...++.+++.+.|+++-.+.+..+++.++ ++++++.+.. ..+ .+..++
T Consensus 280 ~~----~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~gg~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (402)
T PRK06107 280 AA----AAAALN-GDQSFVTESVAVYKQRRDYALALLNAIPGLSCLVPDGAFY--LYVNCAGLIGKTTPEGKVLETDQDV 352 (402)
T ss_pred HH----HHHHhc-CChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceE--EeeecccccccccccccCCCCHHHH
Confidence 21 122221 1333344445555567778888887641222222333332 3455532100 011 145677
Q ss_pred HHHHH-HCCcccc-CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 924 AKRLM-DYGFHGP-TMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 924 ~k~L~-~~Gi~~~-~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
.+.|. ++|+.+. ...|...+.+||++.. +.+++++.++.|.+.+++
T Consensus 353 ~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~--~~e~l~~~l~~l~~~l~~ 400 (402)
T PRK06107 353 VLYLLDSAGVAVVQGTAYGLSPYFRLSIAT--SLETLEEACARIERAVAA 400 (402)
T ss_pred HHHHHHhCCEEEeCccccCCCCeEEEEeCC--CHHHHHHHHHHHHHHHHh
Confidence 76664 6899854 3445456899999984 588888888888777654
No 322
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.60 E-value=2e-13 Score=161.45 Aligned_cols=318 Identities=16% Similarity=0.205 Sum_probs=196.6
Q ss_pred ccccccccCCcccccccccccccc-cccCCCCchhhhhcHHHHHHHHHHHHHHHhC-CCceeeecCchHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSF-ANIHPFAPADQAQGYQEMFNNLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMVIR 669 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f-~~~~P~~p~e~~qG~~~~~~el~~~lael~G-~~~~~l~~~sGa~ge~a~llair 669 (1058)
..+|+|.+.+..++..+. ....+ ...|| ...++.+.|++++. ++. .++.++|++++++++..+|
T Consensus 65 ~~lGh~~p~v~~ai~~q~-~~~~~~~~~~~------------~~~~la~~l~~~~p~~~~-v~f~~sGseA~e~AlklAr 130 (428)
T PRK12389 65 IITGHAHPHITKAITEAA-ENGVLYGTPTE------------LEIEFAKMLKEAIPSLEK-VRFVNSGTEAVMTTIRVAR 130 (428)
T ss_pred cccCCCCHHHHHHHHHHH-HhCCccCCCCH------------HHHHHHHHHHHhCCCCcE-EEEeCCHHHHHHHHHHHHH
Confidence 457888887777666653 22111 11111 23477788888774 443 4668899999888888888
Q ss_pred HHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCCc-------------------EEEEEcCCCCCCCCHHHHHHHHHhcCC
Q 001531 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------------------KIVSVGTDAKGNINIEELRKAAEANRD 729 (1058)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G~-------------------~vv~V~~d~~g~iD~e~L~~~i~~~~~ 729 (1058)
.|. +|.+|+ ...++||....+....|- ++..+|. .|+++++++++++++
T Consensus 131 ~~t------gr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~ 199 (428)
T PRK12389 131 AYT------GRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPF-----NDIEALKEALDKWGD 199 (428)
T ss_pred Hhh------CCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCC-----CCHHHHHHHHHhcCC
Confidence 762 345555 567899976655433221 1122222 378999999987777
Q ss_pred CeEEEEEEcC-CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCc------c--CCcEEEeCCcccccc
Q 001531 730 NLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY------I--GADVCHLNLHKTFCI 797 (1058)
Q Consensus 730 ~taaV~vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~------~--GaDi~~~s~hKtf~~ 797 (1058)
++++|+++.- +..|++.+ .+++|.++|+++|+++++|+++ .|+ +.+. + -+|++++ .|.+
T Consensus 200 ~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~----tG~-Rt~~~~a~~~~gv~PDivt~--gK~l-- 270 (428)
T PRK12389 200 EVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVI----TAF-RFMYGGAQDLLGVEPDLTAL--GKII-- 270 (428)
T ss_pred cEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccc----ccc-ccCcchhhHHhCCCCCeeee--chhh--
Confidence 8888888753 45677652 2999999999999999999985 344 3321 2 3688765 4765
Q ss_pred CCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHH
Q 001531 798 PHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAIL 877 (1058)
Q Consensus 798 P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~ 877 (1058)
++|-| +|.+++++++++.+... + .....+++.|+++.++++.+.|..+.++++. ++...
T Consensus 271 --ggG~P-i~av~~~~~i~~~~~~~--~-------------~~~~~~T~~gnpl~~Aaala~L~~l~~~~l~---~~~~~ 329 (428)
T PRK12389 271 --GGGLP-IGAYGGRKDIMEQVAPL--G-------------PAYQAGTMAGNPASMAAGIACLEVLQQEGVY---EKLDR 329 (428)
T ss_pred --cCCCc-eeEEeEHHHHHhhhccC--C-------------CcccccCCccCHHHHHHHHHHHHHHhcccHH---HHHHH
Confidence 44545 56667887777655210 0 0011112446778888888889888766644 34556
Q ss_pred HHHHHHHHHhcc---CCee--eccCCCccceEEEEecccccc----c--CCCCHHHHHHHHHHCCccccCCCCCCCCEEE
Q 001531 878 NANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKN----T--AGIEPEDVAKRLMDYGFHGPTMSWPVPGTLM 946 (1058)
Q Consensus 878 ~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~~~~----~--~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lr 946 (1058)
+.++|+++|+++ +++. ..+-.+ .+. +.+...+... . .......+.+.|.++|+.+..... +.+
T Consensus 330 ~g~~l~~~L~~l~~~~~~~~~v~r~~g-~~g-i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---~~~- 403 (428)
T PRK12389 330 LGAMLEEGILEAAEKHGITITINRLKG-ALT-VYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPSKY---EAW- 403 (428)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEecCc-EEE-EEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecCCC---CCe-
Confidence 788888888763 3321 111112 221 2221111000 0 000135788889999998754332 223
Q ss_pred EEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 947 IEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 947 is~te~~t~eeid~fi~aL~~i~~e 971 (1058)
.|+..+|++|||++++++++++.+
T Consensus 404 -~~~l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 404 -FLTTAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred -eecCCCCHHHHHHHHHHHHHHHHh
Confidence 467788999999999999988754
No 323
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.60 E-value=1.8e-13 Score=146.42 Aligned_cols=314 Identities=16% Similarity=0.137 Sum_probs=203.4
Q ss_pred HHHHHHHHHHHHHHHhCCCce--eeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHH----HHHhCCcE
Q 001531 630 YQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMK 703 (1058)
Q Consensus 630 ~~~~~~el~~~lael~G~~~~--~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa----~a~~~G~~ 703 (1058)
..++++++.+-+..++...+. .+.+++|..|-++.+.-+. .++|+||+-.. |.+.. .++.+|++
T Consensus 48 ~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~l--------ePgd~vLv~~~--G~wg~ra~D~~~r~ga~ 117 (385)
T KOG2862|consen 48 FVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLL--------EPGDNVLVVST--GTWGQRAADCARRYGAE 117 (385)
T ss_pred HHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhc--------CCCCeEEEEEe--chHHHHHHHHHHhhCce
Confidence 346788888888888876642 3556677666655443221 25677776432 34332 25679999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcC-CCCc
Q 001531 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGY 781 (1058)
Q Consensus 704 vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~-~pg~ 781 (1058)
|..|+.+..+.+.++.+.+++++| +..+|++++- +.+|+.++-++.+.++||+|+++++||++. ++++.. .-.+
T Consensus 118 V~~v~~~~G~~~~le~i~~~lsqh--~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~Va--Slggt~F~mDe 193 (385)
T KOG2862|consen 118 VDVVEADIGQAVPLEEITEKLSQH--KPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVA--SLGGTEFEMDE 193 (385)
T ss_pred eeEEecCcccCccHHHHHHHHHhc--CCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechh--hcCCccceehh
Confidence 999988777789999999999975 4557888876 468999933788899999999999999873 455542 2357
Q ss_pred cCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCC---CcccCCCC---CCCCCCCCCCCC--CccchhhHHHH
Q 001531 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSH---PVVSTGGI---PAPEKSQPLGTI--AAAPWGSALIL 853 (1058)
Q Consensus 782 ~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~---~vg~~~d~---g~~~~~~~t~~i--~sa~~g~~~~~ 853 (1058)
||+|+.....+|.++.| ||+++|+.+++....+..+ .+...-|+ +.+-+....... .+.+ -+ .+
T Consensus 194 wgVDvaytgSQKaL~aP-----~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~p-v~--ll 265 (385)
T KOG2862|consen 194 WGVDVAYTGSQKALGAP-----AGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPP-VQ--LL 265 (385)
T ss_pred hcccEEEecchhhcCCC-----CCcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCc-HH--HH
Confidence 99999998899999655 5888999887544333211 11100011 111011111111 1100 01 11
Q ss_pred HHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccC--CCccceEEEEecccccccCCCCHHHHHHHHHHC
Q 001531 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGV--NGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (1058)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~--~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~ 930 (1058)
-.--+.+..+-++|+++..+++.+++++++..|++. ++.....+ ..+..+ .+.++ .++|..||+.+++++
T Consensus 266 y~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvt--tv~vp-----~gvDw~dVv~~~~~~ 338 (385)
T KOG2862|consen 266 YSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVT--TVKVP-----YGVDWKDVVAYAMSH 338 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcce--eeecC-----CCCCHHHHHHHHHHh
Confidence 122345677789999999999999999999999984 44322111 112222 23443 478999999999976
Q ss_pred -CccccCCCCC-CCCEEEEEcCC-CCCHHHHHHHHHHHHHHHHHH
Q 001531 931 -GFHGPTMSWP-VPGTLMIEPTE-SESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 931 -Gi~~~~~~~p-~~~~Lris~te-~~t~eeid~fi~aL~~i~~e~ 972 (1058)
++.+...--| ++..+||..+- .-+.+-||+.++.|+..+.+.
T Consensus 339 ~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~~ 383 (385)
T KOG2862|consen 339 YVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQRK 383 (385)
T ss_pred cCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhhc
Confidence 5554432223 35678998765 345678999999888876653
No 324
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.60 E-value=9.9e-14 Score=161.15 Aligned_cols=210 Identities=21% Similarity=0.196 Sum_probs=146.4
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHH----HHHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa----~a~~~G~~vv~V~~ 709 (1058)
..++++.++++.|.+.+ +..++|.++..++++++. +++++|+++...|+.... .+...|++++.++.
T Consensus 42 ~~~le~~la~l~g~~~a-~~~~sG~~Ai~~~l~~l~--------~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~ 112 (369)
T cd00614 42 VDALEKKLAALEGGEAA-LAFSSGMAAISTVLLALL--------KAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDP 112 (369)
T ss_pred HHHHHHHHHHHHCCCCE-EEEcCHHHHHHHHHHHHc--------CCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCC
Confidence 45788999999998765 445677766544444331 256789998877765443 24568999999886
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
+ |+++++++++ +++++|++++| |.+|.+. |+++|+++||++|+++++|+++. .+.+..|.++|+|+++
T Consensus 113 ~-----d~~~l~~~i~---~~~~~v~~e~~~np~g~~~-dl~~i~~la~~~g~~livD~t~~--~~~~~~~~~~g~Divv 181 (369)
T cd00614 113 D-----DPEALEAAIK---PETKLVYVESPTNPTLKVV-DIEAIAELAHEHGALLVVDNTFA--TPYLQRPLELGADIVV 181 (369)
T ss_pred C-----CHHHHHHhcC---CCCeEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCc--chhcCChhhhCCcEEE
Confidence 3 6899999996 68999999998 4688887 79999999999999999999854 2334567778999999
Q ss_pred eCCccccccCCCCCCCceeEEEEeC-CCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001531 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~G~i~~~~-~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1058)
.+++|+|+.+ |...+|++++++ ++.+.+... + ...+... +.. .+|+. ..+-+.
T Consensus 182 ~S~tK~l~g~---~~~~gG~v~~~~~~l~~~l~~~------------~-~~~g~~~-----~p~---~a~~~--l~~l~t 235 (369)
T cd00614 182 HSATKYIGGH---SDVIAGVVVGSGEALIQRLRFL------------R-LALGTIL-----SPF---DAWLL--LRGLKT 235 (369)
T ss_pred eccceeccCC---CCceEEEEEeCcHHHHHHHHHH------------H-HhhCCCC-----CHH---HHHHH--HcCCCC
Confidence 9999998521 224588999876 554443100 0 0011111 111 12332 334455
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 001531 868 LTEASKIAILNANYMAKRLEKH 889 (1058)
Q Consensus 868 l~~~a~~~~~~a~yL~~~L~~~ 889 (1058)
+....++..+++.++++.|+++
T Consensus 236 l~~r~~~~~~na~~la~~L~~~ 257 (369)
T cd00614 236 LPLRMERHSENALKVAEFLEKH 257 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC
Confidence 6667778889999999999875
No 325
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.60 E-value=3.5e-13 Score=160.18 Aligned_cols=331 Identities=15% Similarity=0.174 Sum_probs=202.4
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCC-ceeeecCchHHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRA 670 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~-~~~l~~~sGa~ge~a~llair~ 670 (1058)
..+|++.+.+..++..+. ....+... .+.+ .+...++.+.|+++++.+ ...++.++|++++++++..+|.
T Consensus 65 ~~lGh~~p~i~~Ai~~ql-~~~~~~~~-~~~~-------~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~ 135 (457)
T PRK05639 65 ASTGYSHPKLVKAVQEQV-ALIQHSMI-GYTH-------SERAIRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKVSKF 135 (457)
T ss_pred hccCCCCHHHHHHHHHHH-Hhcccccc-CccC-------CHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHH
Confidence 457888777766665552 21111110 0100 022447888899988643 2346788999999888888887
Q ss_pred HHHHcCCCCCCEEE-EcCCCCCccHHHHHhCC--------c-----EEEEEcCCCCCC--------CCH--------HHH
Q 001531 671 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCG--------M-----KIVSVGTDAKGN--------INI--------EEL 720 (1058)
Q Consensus 671 y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G--------~-----~vv~V~~d~~g~--------iD~--------e~L 720 (1058)
|. +|.+|| ...++||....+....| + .++.+|.....+ .|. +.+
T Consensus 136 ~t------gr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l 209 (457)
T PRK05639 136 ST------RRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYL 209 (457)
T ss_pred hc------CCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHH
Confidence 62 345565 46789998765543322 1 245565532111 122 245
Q ss_pred HHHHHh---cCCCeEEEEEEcC-CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc--------CCc
Q 001531 721 RKAAEA---NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GAD 785 (1058)
Q Consensus 721 ~~~i~~---~~~~taaV~vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~--------GaD 785 (1058)
++.+.. .++++++|+++.- ...|++.+ .+++|.++|++||+++++|+++ .|+.+.|.+ -+|
T Consensus 210 e~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~----tG~GrtG~~~a~~~~gv~PD 285 (457)
T PRK05639 210 ENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQ----TGIGRTGKWFASEWFEVKPD 285 (457)
T ss_pred HHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh----hccCcCchHHHHHhcCCCCC
Confidence 554422 2468899888753 34566542 4899999999999999999985 456566642 368
Q ss_pred EEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHch
Q 001531 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1058)
Q Consensus 786 i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1058)
++++ .|.++ +| -.+|.+++++++.....+.. +. ++.|+++.++++.+.+..+..
T Consensus 286 iv~~--gK~l~----gG-~pi~av~~~~~i~~~~~~~~------------------~~-T~~g~p~~~aaa~a~l~~l~~ 339 (457)
T PRK05639 286 LIIF--GKGVA----SG-MGLSGVIGRKELMDLTSGSA------------------LL-TPAANPVISAAAEATLEIIEE 339 (457)
T ss_pred EEEe--chhhc----CC-CcceeEEehHHHHhhcCCCc------------------cc-CCCcCHHHHHHHHHHHHHHHH
Confidence 8885 47663 44 44788888888776322110 11 133566667777888888877
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCC
Q 001531 866 KGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP 940 (1058)
Q Consensus 866 eGl~~~a~~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p 940 (1058)
+++.+ +...+.++|+++|+++ ++++ +.|. |.. ..+-+..+.. .........+.+.|.++|+.+.....
T Consensus 340 ~~l~~---~~~~~g~~l~~~L~~l~~~~~~~~~VrG~-Gl~-~gve~~~~~~-~~~~~~~~~~~~~~~~~Gv~~~~~g~- 412 (457)
T PRK05639 340 ENLLK---NALKVGEFIKKRLLEMKESFEVIGDVRGK-GLM-IGVEIVKENG-KPDPELTGKICWRAFELGLILPSYGM- 412 (457)
T ss_pred ccHHH---HHHHHHHHHHHHHHHHHHhCCCEEeeccc-eeE-EEEEEecCCC-CCCHHHHHHHHHHHHhCCeEEeecCC-
Confidence 66543 3345778888888763 4432 2332 322 1111111100 00001145788889999999754321
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001531 941 VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1058)
Q Consensus 941 ~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~~ 974 (1058)
..+.||+.|+..+|++|||+++++|.+++.++..
T Consensus 413 ~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~~~ 446 (457)
T PRK05639 413 FGNVIRITPPLVITKEIAEKGLEIMERAIKDALA 446 (457)
T ss_pred CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 1479999999999999999999999999987653
No 326
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.60 E-value=4.1e-13 Score=158.46 Aligned_cols=330 Identities=16% Similarity=0.180 Sum_probs=199.9
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCC--ceeeecCchHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIR 669 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~--~~~l~~~sGa~ge~a~llair 669 (1058)
..+|++.+.+..++..+. ..-.+.....+ + .+...++.+.|+++++-+ ...++.++|++++++++..+|
T Consensus 52 ~~lGh~~p~v~~ai~~ql-~~l~~~~~~~~-~-------~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~AlklAr 122 (425)
T PRK07495 52 VNTGHRHPRVIAAVKAQL-DRFTHTCHQVV-P-------YENYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIAR 122 (425)
T ss_pred hccCCCCHHHHHHHHHHH-hhccCcccCcc-C-------CHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHH
Confidence 457888887776666652 21111110001 1 123456888899988532 235788999999988888888
Q ss_pred HHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCC--------c-----EEEEEcCCC--CCC---CCHHHHHHHHHh--cC
Q 001531 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG--------M-----KIVSVGTDA--KGN---INIEELRKAAEA--NR 728 (1058)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G--------~-----~vv~V~~d~--~g~---iD~e~L~~~i~~--~~ 728 (1058)
.| . +|.+|+ +..++||....+....| + .++.+|+.. +|. -+++++++.+++ .+
T Consensus 123 ~~---t---gr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~ 196 (425)
T PRK07495 123 AA---T---GRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDP 196 (425)
T ss_pred Hh---h---CCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccCC
Confidence 76 2 244555 56789998655433211 1 244555532 221 125566777753 24
Q ss_pred CCeEEEEEEcC-CCccccc---ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc--------CCcEEEeCCccccc
Q 001531 729 DNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFC 796 (1058)
Q Consensus 729 ~~taaV~vt~P-n~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~--------GaDi~~~s~hKtf~ 796 (1058)
+++++|+++.- ...|++. ..+++|.++|++||+++++|+++. |+.+.|.+ -+|++++ .|.++
T Consensus 197 ~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t----G~gr~G~~~a~~~~gv~pDi~tl--sK~l~ 270 (425)
T PRK07495 197 QRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQT----GFARTGKLFAMEHHEVAADLTTM--AKGLA 270 (425)
T ss_pred CceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh----cCCcCCCceeecccCCCCCEEee--hhhhc
Confidence 67888877643 2356543 258999999999999999999853 34444421 3577665 47663
Q ss_pred cCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHH
Q 001531 797 IPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI 876 (1058)
Q Consensus 797 ~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~ 876 (1058)
||-.+|++++++++.+.+.... ..+++.|+++.++++.+.+..+..+++.+ +..
T Consensus 271 -----~G~pigav~~~~~i~~~~~~~~------------------~~~T~~~~pl~~aaa~a~l~~l~~~~l~~---~~~ 324 (425)
T PRK07495 271 -----GGFPLAAVTGRAEIMDAPGPGG------------------LGGTYGGNPLGIAAAHAVLDVIEEEDLCE---RAN 324 (425)
T ss_pred -----CCccceEEEEcHHHHhccCCCC------------------cCCCCCCCHHHHHHHHHHHHHHHhchHHH---HHH
Confidence 3345788888887766542110 01112345666666777777776655544 344
Q ss_pred HHHHHHHHHHhcc---CCee--eccCCCccceEEEEecccccccCC--CCHHHHHHHHHHCCccccCCCCCCCCEEEEEc
Q 001531 877 LNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAG--IEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEP 949 (1058)
Q Consensus 877 ~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~~~~~~g--~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~ 949 (1058)
...++|+++|+++ ++.+ +.|. | .+ +.+.+.+-..... .....+.+.+.++|+.+.... +..+.+||.|
T Consensus 325 ~~g~~l~~~L~~l~~~~~~i~~vrG~-G-l~--~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g-~~~~~~r~~P 399 (425)
T PRK07495 325 QLGNRLKQRLASLRETVPEIADIRGP-G-FM--NAVEFNDADSGLPSAEFANRVRLKALEKGLILLTCG-VHGNVIRFLA 399 (425)
T ss_pred HHHHHHHHHHHHHHhhCCCeeeeecC-c-eE--EEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeecC-CCCCEEEEeC
Confidence 5677888888764 3322 2232 3 22 2333321000000 013568888889999875432 1247899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHH
Q 001531 950 TESESKEELDRYCDALISIREEIA 973 (1058)
Q Consensus 950 te~~t~eeid~fi~aL~~i~~e~~ 973 (1058)
+...|++|+|+++++|.+++.+++
T Consensus 400 pl~it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 400 PITIQDDVFAEALDILEASILEAS 423 (425)
T ss_pred CCccCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999988765
No 327
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.60 E-value=4.8e-14 Score=163.14 Aligned_cols=301 Identities=12% Similarity=0.069 Sum_probs=181.5
Q ss_pred HHHHHHHHHHHHHHhCCCc---eeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHH-HHHh---CCcE
Q 001531 631 QEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA-TAAM---CGMK 703 (1058)
Q Consensus 631 ~~~~~el~~~lael~G~~~---~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa-~a~~---~G~~ 703 (1058)
.+.+.+.++.+++++|.+. +.|.+++|+.+..+++..+ .. + +.+++....|+..-. .+.+ .+ +
T Consensus 40 ~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l---~~-----~-~~l~i~~G~~~~~~~~~a~~~~~~~-~ 109 (361)
T TIGR01366 40 KNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGL---IE-----K-KSLHLSFGEFSSKFAKAVKLAPWLG-E 109 (361)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhc---cc-----c-cccEEecCHHHHHHHHHHHhhhccC-C
Confidence 3578899999999999843 2344566776655444333 11 1 223343444443322 2333 33 6
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc
Q 001531 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (1058)
Q Consensus 704 vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~ 782 (1058)
+..+++++...++. .++ ++++.|.+++- |.+|++. ||++| +|++|++++||+++..+...+. ..
T Consensus 110 ~~~~~~~~~~~~~~-----~~~---~~~~lV~~~h~et~tG~~~-pi~~I---~~~~g~~~iVDavqs~g~~~id-v~-- 174 (361)
T TIGR01366 110 PIIVTADPGSAPEP-----QAD---PGVDVIAWAHNETSTGVAV-PVRRP---EGSDDALVVIDATSGAGGLPVD-IA-- 174 (361)
T ss_pred ceEEecCCCCCCCC-----ccC---CCCCEEEEcccCCccceec-ccccc---cccCCCeEEEEcCccccCCCCC-HH--
Confidence 77777765444443 233 78888988875 5689998 78887 5899999999999753332221 11
Q ss_pred CCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcc-----cCCCC---CCCCCCCCCCCCCccchhhHHHHH
Q 001531 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVV-----STGGI---PAPEKSQPLGTIAAAPWGSALILP 854 (1058)
Q Consensus 783 GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg-----~~~d~---g~~~~~~~t~~i~sa~~g~~~~~~ 854 (1058)
.+|+++++.||+|+.| ||++++++++++.+.+.....+ ...|+ .....+..+.++.. ..+ +.
T Consensus 175 ~~D~~~~s~~K~lg~~-----~Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~----i~~-i~ 244 (361)
T TIGR01366 175 ETDVYYFAPQKNFASD-----GGLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPA----IAT-LA 244 (361)
T ss_pred HCCEEEEEchhhcCCC-----CceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCch----HHH-HH
Confidence 3899999999998533 3688888887655443211111 00011 00001122333321 111 11
Q ss_pred HHHHHHHHHchh-hHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCC
Q 001531 855 ISYTYIAMMGSK-GLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 931 (1058)
Q Consensus 855 ~a~a~l~~lG~e-Gl~~~a~~~~~~a~yL~~~L~~~--~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~G 931 (1058)
...+.+..+-++ |+..+.++...+++++.++|.+. +++...++........++.+. .+++..++.+.|.++|
T Consensus 245 ~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~-----~g~~~~~v~~~L~~~g 319 (361)
T TIGR01366 245 LLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFV-----DDIDAATVAKILRANG 319 (361)
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECC-----CccCHHHHHHHHHHCC
Confidence 222334444445 57777788889999999999886 233222211111111234443 3678899999999999
Q ss_pred ccccCCCCCC-CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 932 FHGPTMSWPV-PGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 932 i~~~~~~~p~-~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
|.+......+ .+.+||+....+|.+|||+|+++|++++++
T Consensus 320 I~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 320 IVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred CeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhh
Confidence 9863221111 357999999999999999999999998664
No 328
>PRK05968 hypothetical protein; Provisional
Probab=99.60 E-value=6.4e-14 Score=163.65 Aligned_cols=283 Identities=14% Similarity=0.134 Sum_probs=178.1
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccH----HHHHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~p----a~a~~~G~~vv~V~~ 709 (1058)
..++++.++++.|.+.+. ..++|..+...+++++ . +++++||++...|+.+. ..+...|++++.++.
T Consensus 65 ~~~le~~lA~l~g~~~av-~~~sG~~Ai~~al~al---~-----~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (389)
T PRK05968 65 VRAFEEMLAKLEGAEDAR-GFASGMAAISSTVLSF---V-----EPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG 135 (389)
T ss_pred HHHHHHHHHHHhCCCcEE-EECCHHHHHHHHHHHH---h-----CCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC
Confidence 457889999999998653 4466765553333322 1 25678998877665432 235568999999875
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
.|++++++++ ++|++|++++|+ ..+.+. |+++|+++||++|+++++|+++.. ..+..|..+|+|+++
T Consensus 136 -----~d~~~l~~~i----~~tklV~ie~pt~~~~~~~-dl~~i~~la~~~gi~vivD~a~a~--~~~~~p~~~g~Divv 203 (389)
T PRK05968 136 -----RDEEAVAKAL----PGAKLLYLESPTSWVFELQ-DVAALAALAKRHGVVTMIDNSWAS--PVFQRPITLGVDLVI 203 (389)
T ss_pred -----CCHHHHHHhc----ccCCEEEEECCCCCCCcHH-HHHHHHHHHHHcCCEEEEECCCcc--hhccCchhcCCcEEE
Confidence 3899999887 467889999985 556666 899999999999999999998642 223456678999999
Q ss_pred eCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCC-CCCccchhhHHHHHHHHHHHHHHchhh
Q 001531 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLG-TIAAAPWGSALILPISYTYIAMMGSKG 867 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~-~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1058)
.+++|+|+.| |++++|+++.++++...+.... . ...+ .++ + . .|| +...+-+.
T Consensus 204 ~S~tK~l~g~---~~~~gG~i~~~~~~~~~l~~~~-----------~-~~~g~~~~--~----~---~A~--~~l~~L~t 257 (389)
T PRK05968 204 HSASKYLGGH---SDTVAGVVAGSKEHIARINAEA-----------Y-PYLGAKLS--P----F---EAW--LLLRGLRT 257 (389)
T ss_pred eeccccccCC---CCeEEEEEEECHHHHHHHHHHH-----------H-HhCCCCCC--h----H---HHH--HHHcccCc
Confidence 9999998632 4456788888776544321000 0 0011 111 1 1 122 23444456
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc--C-CeeeccCCC-------ccceEEEEecccccccCCCCHHHHHHHHHHCCcccc--
Q 001531 868 LTEASKIAILNANYMAKRLEKH--Y-PILFRGVNG-------TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP-- 935 (1058)
Q Consensus 868 l~~~a~~~~~~a~yL~~~L~~~--~-~v~~~g~~~-------~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~-- 935 (1058)
+..+.++..+++.++++.|+++ + .+.|++... ..-..+.|++. .+.+..++.++|...++..+
T Consensus 258 l~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~-----~~~~~~~f~~~L~~~~~~~s~G 332 (389)
T PRK05968 258 LPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFR-----EGIDVRAFADALKLFRLGVSWG 332 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEEC-----CHHHHHHHHHhCCccEEecCCC
Confidence 6777777888999999999976 2 233443111 01113344443 13456788888876554321
Q ss_pred ---C-C-----C----C--------CC-CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 936 ---T-M-----S----W--------PV-PGTLMIEPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 936 ---~-~-----~----~--------p~-~~~Lris~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
+ + . . .+ ++.+|+|+...+ .|.++++|+++++.+
T Consensus 333 ~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~----~~dl~~dl~~al~~~ 387 (389)
T PRK05968 333 GHESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGLEG----TEALWADLEQALAAA 387 (389)
T ss_pred CCCceeeeCcccccccCCHHHHHhcCCCCCeEEEEeccCC----HHHHHHHHHHHHHHh
Confidence 1 0 0 0 11 468999998654 455566666655543
No 329
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.60 E-value=2.8e-13 Score=154.04 Aligned_cols=291 Identities=20% Similarity=0.304 Sum_probs=185.4
Q ss_pred HHHHHHHHHHHHhCC-CceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEE-cCCCCCccHHHHHhCC---------
Q 001531 633 MFNNLGEWLCTITGF-DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCG--------- 701 (1058)
Q Consensus 633 ~~~el~~~lael~G~-~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vli-p~saHg~~pa~a~~~G--------- 701 (1058)
..-++.++++++++. +.+. .+|||+.++.+++..+|+| ++|++|+. ..++||.+.......|
T Consensus 94 ~Ei~~Aell~~~~p~~e~vr-fvnSGTEAtmsAiRlARa~------TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p 166 (432)
T COG0001 94 LEVELAELLIERVPSIEKVR-FVNSGTEATMSAIRLARAY------TGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSP 166 (432)
T ss_pred HHHHHHHHHHHhcCcccEEE-EecchhHHHHHHHHHHHHh------hCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCC
Confidence 344678899999886 5554 4678887665555555554 56788775 6789998877643222
Q ss_pred ----c------EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc---cHHHHHHHHHHcCCEEEEec
Q 001531 702 ----M------KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDG 767 (1058)
Q Consensus 702 ----~------~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~ 767 (1058)
+ .+..+|+ .|++.+++++++.+++++||+++.- ...|++.| .++++.++|+++|+++|+|+
T Consensus 167 ~s~Gvp~~~a~~ti~~~y-----ND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DE 241 (432)
T COG0001 167 SSPGVPADVAKHTLVLPY-----NDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDE 241 (432)
T ss_pred CCCCCChhhhccEEEecC-----CCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEec
Confidence 2 3555666 6999999999988899999998763 56788763 58999999999999999999
Q ss_pred cCcccccCcCCC--C---ccC--CcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCC-CCCCcccCCCCCCCCCCCCC
Q 001531 768 ANMNAQVGLTSP--G---YIG--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL-PSHPVVSTGGIPAPEKSQPL 839 (1058)
Q Consensus 768 a~~~al~gl~~p--g---~~G--aDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~l-pg~~vg~~~d~g~~~~~~~t 839 (1058)
+ ..|+.-+ | .+| +|+.++ .|.. | ||-.+|.++.++++++.+ |...+.+ .
T Consensus 242 V----iTGFR~~~gGaq~~~gi~PDlttl--GKiI----G-GGlP~ga~gGr~eiM~~~~p~g~vyq------------a 298 (432)
T COG0001 242 V----ITGFRVALGGAQGYYGVEPDLTTL--GKII----G-GGLPIGAFGGRAEIMEQLAPLGPVYQ------------A 298 (432)
T ss_pred c----hhhcccCCcccccccCcCcchhhh--hhhh----c-CCcceeeeccHHHHHhhhCCCCCccc------------c
Confidence 8 3344222 1 233 687654 4665 3 566689999999888765 3222211 1
Q ss_pred CCCCccchhhHHHHHHHHHHHHHHch-hh-HHHHHHHHHHHHHHHHHHHhcc-----CCeeeccCCCccceEEEEec-cc
Q 001531 840 GTIAAAPWGSALILPISYTYIAMMGS-KG-LTEASKIAILNANYMAKRLEKH-----YPILFRGVNGTVAHEFIVDL-RG 911 (1058)
Q Consensus 840 ~~i~sa~~g~~~~~~~a~a~l~~lG~-eG-l~~~a~~~~~~a~yL~~~L~~~-----~~v~~~g~~~~~~~e~vv~~-~~ 911 (1058)
++ +.|+++.+++..+.+..+-. ++ ++++ ...++.|++.|++. +++...+. +..+ .+.|.- ..
T Consensus 299 GT----~sgnplamaAG~atl~~l~~~~~~y~~l----~~~~~~L~~gl~~~~~~~g~~~~v~~~-gsm~-~i~F~~~~~ 368 (432)
T COG0001 299 GT----LSGNPLAMAAGLATLEELMTEEGVYERL----DALGERLAEGLRAAAERHGIPLTVNRV-GSMF-GIFFTEEGV 368 (432)
T ss_pred CC----CCCcHHHHHHHHHHHHHHHhcccHHHHH----HHHHHHHHHHHHHHHHHhCCCeEEeee-cceE-EEEecCCCC
Confidence 22 33567777777777777665 44 4433 34556666666652 33332221 2222 122211 10
Q ss_pred --cc--ccCCCC-HHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001531 912 --LK--NTAGIE-PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1058)
Q Consensus 912 --~~--~~~g~~-~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~ 973 (1058)
+. .....+ ..++.+.|+++|++.+...| ...-+|+ .+|++|||++++++.+++.++.
T Consensus 369 ~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~~---ea~flS~--ahte~di~~~~~a~~~~~~~~~ 430 (432)
T COG0001 369 RNYADAKRSDVERFAKFFHHLLNRGVYLAPSQF---EAGFLST--AHTEEDIDRTLEAADEAFKELA 430 (432)
T ss_pred CCHHHHHhhchHHHHHHHHHHHhCCcccCCccc---cceeeec--ccCHHHHHHHHHHHHHHHHHhh
Confidence 00 000111 34566788899999764433 3344444 5789999999999998887765
No 330
>PLN02656 tyrosine transaminase
Probab=99.60 E-value=2.7e-13 Score=159.73 Aligned_cols=341 Identities=15% Similarity=0.119 Sum_probs=192.0
Q ss_pred cccccccccccC----Ccccccccccccccccc--cCCCCchhhhhcHHHHHHHHHHHHHHHhCC--CceeeecCchHHH
Q 001531 589 HSMIPLGSCTMK----LNATTEMMPVTWPSFAN--IHPFAPADQAQGYQEMFNNLGEWLCTITGF--DSFSLQPNAGAAG 660 (1058)
Q Consensus 589 ~~~i~lGs~t~~----~~~~~~~~~~~~~~f~~--~~P~~p~e~~qG~~~~~~el~~~lael~G~--~~~~l~~~sGa~g 660 (1058)
..++.|+.|.+. +++...........+.. .+.|.| .+|..++...+.+++....|. +...+..++|++.
T Consensus 31 ~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 107 (409)
T PLN02656 31 KRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAP---TVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQ 107 (409)
T ss_pred CeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCC---CCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHH
Confidence 467888888775 33222222110000110 223433 357666555555665554453 3444444455442
Q ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCC-C-CCCCHHHHHHHHHhcCCCeEEEEEEc
Q 001531 661 EYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-K-GNINIEELRKAAEANRDNLSTLMVTY 738 (1058)
Q Consensus 661 e~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~-~-g~iD~e~L~~~i~~~~~~taaV~vt~ 738 (1058)
+..++++.+. .++++|++++..|..+...+...|++++.+++++ + +.+|+++++++++ +++++|++++
T Consensus 108 --al~~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~ 177 (409)
T PLN02656 108 --AIDVALSMLA-----RPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALAD---QNTVALVIIN 177 (409)
T ss_pred --HHHHHHHHHh-----CCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhc---cCceEEEEEC
Confidence 3333444432 2567899999888777667788999999999853 3 5799999999986 6788999999
Q ss_pred CC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCcc-cccCcC-CC-CccCC---cEEEeCCccccccCCCCCCCceeEE
Q 001531 739 PS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVGLT-SP-GYIGA---DVCHLNLHKTFCIPHGGGGPGMGPI 809 (1058)
Q Consensus 739 Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~-al~gl~-~p-g~~Ga---Di~~~s~hKtf~~P~g~GGPg~G~i 809 (1058)
|+ .+|.+- +++++|+++|+++|+++++|+++.- ...+-. .| ..++. =|++.++.|+|+.| |.++|++
T Consensus 178 P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~p----GlRiG~~ 253 (409)
T PLN02656 178 PGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVP----GWRLGWF 253 (409)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCc----ceeEEEE
Confidence 95 788873 2699999999999999999998641 111110 11 11111 14567788887654 7899999
Q ss_pred EEeC--------CCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHH
Q 001531 810 GVKK--------HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANY 881 (1058)
Q Consensus 810 ~~~~--------~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~y 881 (1058)
.+.. ++...+-. . .. ...+.+...|. ++..++.....+-+++..+...++.++
T Consensus 254 i~~~~~~~~~~~~~~~~~~~-------------~-~~-~~~~~s~~~q~----a~~~~l~~~~~~~~~~~~~~~~~~r~~ 314 (409)
T PLN02656 254 VTTDPSGSFRDPKIVERIKK-------------Y-FD-ILGGPATFIQA----AVPTILEQTDESFFKKTINILKQSSDI 314 (409)
T ss_pred EEeCcccccccHHHHHHHHH-------------H-Hh-hhcCCCHHHHH----HHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 9852 22221100 0 00 00111111221 222223221223355555566677788
Q ss_pred HHHHHhccCCee-eccCCCccceEEEEecccccccCCC-CHHH-HHHHHHHCCccc-cCCCCCCCCEEEEEcCCCCCHHH
Q 001531 882 MAKRLEKHYPIL-FRGVNGTVAHEFIVDLRGLKNTAGI-EPED-VAKRLMDYGFHG-PTMSWPVPGTLMIEPTESESKEE 957 (1058)
Q Consensus 882 L~~~L~~~~~v~-~~g~~~~~~~e~vv~~~~~~~~~g~-~~~~-v~k~L~~~Gi~~-~~~~~p~~~~Lris~te~~t~ee 957 (1058)
+.+.|+++.... +..+++..+ ++++++.... .+. +..+ +.+.|.++|+.+ +...|..++.+||+++. +.++
T Consensus 315 ~~~~L~~~~~~~~~~~p~gg~~--~w~~l~~~~~-~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~--~~e~ 389 (409)
T PLN02656 315 CCDRIKEIPCITCPHKPEGSMA--VMVKLNLSLL-EDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAA--DPSS 389 (409)
T ss_pred HHHHHhhCCCCcCCcCCCeEEE--EEEecchhhc-CCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCC--CHHH
Confidence 888887741111 112223232 4455531000 011 2334 456677889975 33335446899999984 5666
Q ss_pred HHHHHHHHHHHHH
Q 001531 958 LDRYCDALISIRE 970 (1058)
Q Consensus 958 id~fi~aL~~i~~ 970 (1058)
++..++.|++++.
T Consensus 390 l~eal~rl~~~~~ 402 (409)
T PLN02656 390 LEEALGRIKSFYL 402 (409)
T ss_pred HHHHHHHHHHHHH
Confidence 6666666665543
No 331
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.60 E-value=7.6e-14 Score=163.04 Aligned_cols=219 Identities=21% Similarity=0.244 Sum_probs=149.2
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHH----HHHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa----~a~~~G~~vv~V~~ 709 (1058)
..++++.++++.|.+.+ +..++|..+....+.++ . +++++|+++...|+.... .+...|++++.++.
T Consensus 61 ~~~le~~lA~l~g~~~a-v~~~sG~~Ai~~~l~al---~-----~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~ 131 (391)
T TIGR01328 61 VSNLEGRIAFLEGTEAA-VATSSGMGAIAATLLTI---L-----KAGDHLISDECLYGCTFALLEHALTKFGIQVDFINM 131 (391)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHH---h-----CCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECC
Confidence 45788999999999875 56667776554333332 1 256789998877764332 24568999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
+ |+++++++++ ++|++|++++|+ ++|.+. |+++|+++||++|+++++|+++.. +.+..|...|+|+++
T Consensus 132 ~-----d~e~l~~~i~---~~tklV~le~p~Np~G~v~-dl~~I~~la~~~gi~livD~a~a~--~~~~~~~~~g~Divv 200 (391)
T TIGR01328 132 A-----IPEEVKAHIK---DNTKIVYFETPANPTMKLI-DMERVCRDAHSQGVKVIVDNTFAT--PMLTNPVALGVDVVV 200 (391)
T ss_pred C-----CHHHHHHhhc---cCCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEECCCch--hccCCchhcCCCEEE
Confidence 4 8999999996 789999999995 689887 799999999999999999998643 223456678999999
Q ss_pred eCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhH
Q 001531 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl 868 (1058)
.+++|+|+.+ |++.+|+++.++++...+.. .. .....+...+ + . .|| +...+-+.+
T Consensus 201 ~S~sK~lgg~---g~~~gG~v~~~~~li~~l~~--~~---------~~~~~g~~l~-~----~---~a~--l~l~~L~tl 256 (391)
T TIGR01328 201 HSATKYIGGH---GDVVAGLICGKAELLQQIRM--VG---------IKDMTGSVIS-P----F---DAW--LILRGLKTL 256 (391)
T ss_pred ccccccccCC---CCceEEEEEcCHHHHHHHHH--HH---------HHhCCCCCCC-c----H---HHH--HHHhCcCcH
Confidence 9999998532 33446888887765544310 00 0000111111 1 1 122 223344455
Q ss_pred HHHHHHHHHHHHHHHHHHhcc--C-Ceeecc
Q 001531 869 TEASKIAILNANYMAKRLEKH--Y-PILFRG 896 (1058)
Q Consensus 869 ~~~a~~~~~~a~yL~~~L~~~--~-~v~~~g 896 (1058)
..+.++..+++.++++.|+++ + .+.|+|
T Consensus 257 ~~r~~~~~~na~~la~~L~~~p~v~~v~yp~ 287 (391)
T TIGR01328 257 NIRMKRHSENAMKVAEYLKSHPAVEKVYYPG 287 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccEEECCC
Confidence 666777888999999999875 2 345655
No 332
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.60 E-value=3.5e-13 Score=160.39 Aligned_cols=299 Identities=18% Similarity=0.192 Sum_probs=186.7
Q ss_pred HHHHHHHHHHHHhCCC-ceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCCc--------
Q 001531 633 MFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------- 702 (1058)
Q Consensus 633 ~~~el~~~lael~G~~-~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G~-------- 702 (1058)
...++.+.|+++++.. ...++.++|+++.++++..+|.| . +|.+|+ +..++||.........|-
T Consensus 114 ~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~---t---gr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~ 187 (459)
T PRK06082 114 TAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHI---T---GNFKVVSLWDSFHGASLDAISVGGEACFRQGMG 187 (459)
T ss_pred HHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHHHHHh---c---CCCEEEEEeCCCcCccHHHHhhcCCcccccCCC
Confidence 3457888999998643 23477889999988888888876 2 234554 578899986544332221
Q ss_pred ----EEEEEcCCCC-----CCC------CHHHHHHHHHhcCCCeEEEEEEcCCCccccccc---HHHHHHHHHHcCCEEE
Q 001531 703 ----KIVSVGTDAK-----GNI------NIEELRKAAEANRDNLSTLMVTYPSTHGVYEEG---IDEICKIIHDNGGQVY 764 (1058)
Q Consensus 703 ----~vv~V~~d~~-----g~i------D~e~L~~~i~~~~~~taaV~vt~Pn~~G~i~~d---I~eI~~lah~~g~lv~ 764 (1058)
.+..+|.... ... ++++|++.++++ +++++|+++.-...|.+.++ +++|.++|++||+++|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~-~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI 266 (459)
T PRK06082 188 PLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKE-GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLI 266 (459)
T ss_pred CCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcC-CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 1233432111 011 246688888653 57888887653323543333 8999999999999999
Q ss_pred EeccCcccccCcCCCCcc------C--CcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCC
Q 001531 765 MDGANMNAQVGLTSPGYI------G--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKS 836 (1058)
Q Consensus 765 vD~a~~~al~gl~~pg~~------G--aDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~ 836 (1058)
+|+++ .|+.+.|.+ | +|++++ .|.+ ++|+-.+|.+++++++.....+..
T Consensus 267 ~DEV~----tG~GRtG~~fa~e~~gv~PDiv~~--gKgl----~gG~~P~~av~~~~~i~~~~~~~~------------- 323 (459)
T PRK06082 267 IDEIP----NGMGRTGEWFTHQAYGIEPDILCI--GKGL----GGGLVPIAAMITKDKYNTAAQISL------------- 323 (459)
T ss_pred Eechh----hCCCccchhhHhHhhCCCCCEEEe--cccc----cCCCCcceEEEEcHHHHhhccCCC-------------
Confidence 99984 466666643 3 688875 4766 445423666777766554322110
Q ss_pred CCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCccceEEEEeccc
Q 001531 837 QPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRG 911 (1058)
Q Consensus 837 ~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~ 911 (1058)
. .. ++.|+++.++++.+.|..+.++++.+ +..++.++|.++|+++ ++++ +.|. |... -+-+....
T Consensus 324 ---~-~~-T~~gnpl~~aaa~a~L~~l~~~~l~~---~~~~~g~~l~~~L~~l~~~~~~i~~vrG~-Gl~~-~ve~~~~~ 393 (459)
T PRK06082 324 ---G-HY-THEKSPLGCAAALATIEVIEQEGLLE---KVKADSQFMRERLLEMKAKYPLIGDVRGI-GLLW-GVELVTDR 393 (459)
T ss_pred ---C-CC-CCCcCHHHHHHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHHHHHhhCCCeeeeeec-ccee-EEEEccCc
Confidence 0 11 24467777778888888886666543 4556778888888764 3332 2332 3221 11121110
Q ss_pred ccccCC-CCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001531 912 LKNTAG-IEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1058)
Q Consensus 912 ~~~~~g-~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~~ 974 (1058)
-..... .....+...+.++|+.+.... .+.++++|....|++|||++++++.+++.++.+
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~Gvl~~~~~---~~~i~~~Ppl~it~~eid~~~~~l~~~l~~~~~ 454 (459)
T PRK06082 394 HTKERAYDEAEAVLYRCLNNGLSFKVSQ---GNVIQLSPPLIITREELTQALAILEEAIAKICQ 454 (459)
T ss_pred cccCccHHHHHHHHHHHHhCCCEEEecC---CCEEEEeCCCccCHHHHHHHHHHHHHHHHHHhh
Confidence 000000 013567788889999864322 478999999999999999999999999887644
No 333
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.60 E-value=1.2e-13 Score=164.38 Aligned_cols=289 Identities=16% Similarity=0.201 Sum_probs=178.6
Q ss_pred HHHHHHHHHHHhC-CCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEE-EcCCCCCccHHHHHh------------
Q 001531 634 FNNLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAM------------ 699 (1058)
Q Consensus 634 ~~el~~~lael~G-~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~------------ 699 (1058)
..++.++|++++. ++. .++.++|+++.++++..+|.| ++|++|+ +..++||........
T Consensus 141 ~~~lAe~l~~~~p~~~~-v~f~~SGsEA~e~AlklAR~~------tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~ 213 (474)
T PLN02482 141 ENVLAEMVIDAVPSVEM-VRFVNSGTEACMGVLRLARAY------TGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPD 213 (474)
T ss_pred HHHHHHHHHHhCCCCCE-EEEeCChHHHHHHHHHHHHHh------cCCCEEEEECCccCCCcchhhhhcCCCccccCCCC
Confidence 4477888988874 443 356789998888888888876 2345666 467899965332111
Q ss_pred -CCc------EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc---cHHHHHHHHHHcCCEEEEecc
Q 001531 700 -CGM------KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGA 768 (1058)
Q Consensus 700 -~G~------~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a 768 (1058)
.|+ .++.+|. .|+++|++.++++.+++++|+++.- +..|.+.+ .+++|.++|++||+++|+|++
T Consensus 214 ~~g~~~~~~~~~~~~~~-----nd~~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV 288 (474)
T PLN02482 214 SPGVPKAATSATLTAPY-----NDLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEV 288 (474)
T ss_pred CCCCCCCCCCCeEEecC-----CChHHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 111 1222332 3889999999877678888877653 45676653 378999999999999999998
Q ss_pred CcccccCcCCCCc------cC--CcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCC
Q 001531 769 NMNAQVGLTSPGY------IG--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLG 840 (1058)
Q Consensus 769 ~~~al~gl~~pg~------~G--aDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~ 840 (1058)
+. |+ +.+. +| +|++++ .|.+ ++|-| +|.+++++++++.+... + . .
T Consensus 289 ~t----Gf-R~g~~ga~~~~gv~PDi~t~--gK~l----ggG~P-igav~g~~ei~~~~~~~--~---------~----~ 341 (474)
T PLN02482 289 MT----GF-RIAYGGAQEYFGITPDLTTL--GKVI----GGGLP-VGAYGGRREIMEMVAPA--G---------P----M 341 (474)
T ss_pred cc----Ce-ecCcchHhHHhCCCCCEEEe--cchh----hCCCc-eEEEEEcHHHHHhhccC--C---------C----c
Confidence 53 33 2222 23 688765 4766 34445 56668887776655210 0 0 0
Q ss_pred CCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-----CCeeeccCCCccceEEEEeccccc--
Q 001531 841 TIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-----YPILFRGVNGTVAHEFIVDLRGLK-- 913 (1058)
Q Consensus 841 ~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-----~~v~~~g~~~~~~~e~vv~~~~~~-- 913 (1058)
...+++.|+++.++++.+.|..+..+++. ++...+.++|+++|++. +++...+. +..+. +.+...+..
T Consensus 342 ~~~~T~~gnpl~~aAala~L~~l~~~~~~---~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v-~g~~g-i~f~~~~~~~~ 416 (474)
T PLN02482 342 YQAGTLSGNPLAMTAGIHTLKRLQQPGTY---EYLDKITKKLIQGILEAGKKAGHEMCGGYI-SGMFG-FFFTEGPVYNF 416 (474)
T ss_pred ccccCcchhHHHHHHHHHHHHHHhccCHH---HHHHHHHHHHHHHHHHHHHhcCCCEEEccc-ceEEE-EEEecCCccCh
Confidence 11122446777777888888888665543 44456778898888764 22221111 12221 112111100
Q ss_pred ----ccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 914 ----NTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 914 ----~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
.........+.+.|.++|+.+....+|. + .|+..+|++|||++++++.+++.+
T Consensus 417 ~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~~~-~----~psl~ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 417 ADAKKSDTAKFARFHRGMLEEGVYLAPSQFEA-G----FTSLAHTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred hhhccCCHHHHHHHHHHHHHCCeEEeccCCCC-C----cCCCCCCHHHHHHHHHHHHHHHHh
Confidence 0000113468888999999875443332 1 267788999999999999998765
No 334
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.60 E-value=2e-13 Score=160.11 Aligned_cols=144 Identities=20% Similarity=0.180 Sum_probs=122.7
Q ss_pred HHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc----
Q 001531 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 288 (1058)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~---- 288 (1058)
..+||+.+|++.|.+. +..+.+|++|+.++++++ . ++||+||++...|..+...+....+.+|+++++++.
T Consensus 63 v~~lE~~la~leg~~~--av~~~SG~aAi~~al~al-l--~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~ 137 (432)
T PRK06702 63 LAAFEQKLAELEGGVG--AVATASGQAAIMLAVLNI-C--SSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTA 137 (432)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHh-c--CCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECCCCCH
Confidence 4457789999999876 778999999999888876 3 389999999999998888876655678999999875
Q ss_pred hhhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccc
Q 001531 289 KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVP 362 (1058)
Q Consensus 289 ~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P 362 (1058)
+++++ ++++|++|++.+| |.++.+.|+++|+++||++|+++++| +.++.+.+..|-++||||++.|. |.++++
T Consensus 138 ~~l~~~I~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD-~T~~tP~~~~pl~~GADIvv~S~TKy~~Gh 213 (432)
T PRK06702 138 DEIVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVD-NTLATPYLCQAFEHGANIIVHSTTKYIDGH 213 (432)
T ss_pred HHHHHhCCcCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEE-CCCCchhhCChhhcCCCEEEEccccccCCC
Confidence 46666 8899999999887 78999999999999999999999994 45666777788899999999998 888753
No 335
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.60 E-value=3.7e-13 Score=161.48 Aligned_cols=289 Identities=13% Similarity=0.072 Sum_probs=177.2
Q ss_pred HHHHHHHHHHHHhcCCC-------------CcceEeecchHHHHHHHHH-HhccccC----------------------C
Q 001531 211 ESLLNFQTMIADLTGLP-------------MSNASLLDEGTAAAEAMAM-CNNIQKG----------------------K 254 (1058)
Q Consensus 211 ~~l~e~q~~ia~L~G~~-------------~anasl~~~~Taa~ea~~~-a~~~~~~----------------------~ 254 (1058)
+.-.+.-.|++++++.. .+...+.+|||.++...++ |+....+ +
T Consensus 129 ~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~ 208 (522)
T TIGR03799 129 PLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYD 208 (522)
T ss_pred HHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCC
Confidence 33344556888887521 1335667788866554443 4321100 2
Q ss_pred CCEEEEcCCCCHHHHHHHHHhhcCCCe---EEEEeCc--------hhhhc-cC----CCEeEEE--EEcC-CCceeeccH
Q 001531 255 KKTFIIASNCHPQTIDICITRADGFDI---KVVVSDL--------KDIDY-KS----GDVCGVL--VQYP-GTEGEVLDY 315 (1058)
Q Consensus 255 gd~Vlv~~~~Hps~~~~~~~~a~~~gi---~v~~v~~--------~~l~~-l~----~~t~~V~--v~~p-n~~G~i~dl 315 (1058)
+..|++++..|.|+.+.++. .|+ +++.++. ++|++ +. .+++.++ .+.. +.+|.++|+
T Consensus 209 ~~~v~~S~~~H~S~~kaa~~----lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl 284 (522)
T TIGR03799 209 GLAILVSERGHYSLGKAADV----LGIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPL 284 (522)
T ss_pred ceEEEECCCchHHHHHHHHH----cCCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCH
Confidence 35799999999999887654 244 4555544 34554 42 3443333 3444 479999999
Q ss_pred HHHHHHHHhcCcEEEEEeccccccCCCCC------Cc-ccceEEEecC-cccccccCCCCCceEEEEEeh-hhhhcCCCc
Q 001531 316 GDFIKNAHANGVKVVMATDLLALTILKPP------GE-LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQ-EYKRMMPGR 386 (1058)
Q Consensus 316 ~~I~~~a~~~galliV~a~~~slg~l~~p------~~-~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~-~~~~~lpgr 386 (1058)
++|+++|+++|++++||+ .++.+.+..+ .. .+||.++.++ |++++|++ +|++++|+ ++.+.+...
T Consensus 285 ~eIa~i~~~~g~~lHVDa-A~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g-----~G~llvr~~~~~~~~~~~ 358 (522)
T TIGR03799 285 DEMADIAQELGCHFHVDA-AWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMG-----AGMVLFKDPALMSAIEHH 358 (522)
T ss_pred HHHHHHHHHcCCeEEEEc-hhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcc-----cEEEEEeCHHHHHHhccC
Confidence 999999999999999954 2333322222 22 3899999999 66777754 57888875 444544321
Q ss_pred EEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCC
Q 001531 387 IVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGT 466 (1058)
Q Consensus 387 ivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~ 466 (1058)
...-.. .|...+ .+.+.+-++++. + +.+-++ +.++|.+|++++.++..++++|+.+.|++..+
T Consensus 359 -~~Yl~~-~~~~d~--------~~~~legsR~~~----a-l~lw~a--L~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~ 421 (522)
T TIGR03799 359 -AEYILR-KGSKDL--------GSHTLEGSRPGM----A-MLVYAG--LHIIGRKGYELLIDQSIEKAKYFADLIQQQPD 421 (522)
T ss_pred -cchhcC-CCCCcc--------ccceeecCcchH----H-HHHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 000000 000000 001122222221 2 123333 48889999999999999999999999999855
Q ss_pred eEEcCCCCccEEEEecCC-------------------------HHHHHHHHHHcCce-eee--cc----C----CeEEEE
Q 001531 467 VEVQGLPFFDTVKVKCAD-------------------------AHAIASAAYKIEMN-LRV--VD----S----NTVTAS 510 (1058)
Q Consensus 467 ~~l~~~~~~~~v~i~~~~-------------------------~~~l~~~L~~~GI~-~~~--~~----~----~~lris 510 (1058)
++++.++.++.|+|+... ...+.+++.+.|.. +.. +. . -.+|++
T Consensus 422 ~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~ 501 (522)
T TIGR03799 422 FELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVV 501 (522)
T ss_pred eEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEE
Confidence 999987767777776310 23566666666763 332 11 1 248999
Q ss_pred e-ccCCCHHHHHHHHHH
Q 001531 511 F-DETTTLEDVDKLFIV 526 (1058)
Q Consensus 511 ~-~~~~t~edid~ll~a 526 (1058)
+ .+.+|.+||+.+++.
T Consensus 502 ~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 502 LANPLTTHEILQDILDE 518 (522)
T ss_pred ecCCCCCHHHHHHHHHH
Confidence 8 568889999988764
No 336
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.60 E-value=2e-13 Score=156.20 Aligned_cols=214 Identities=22% Similarity=0.211 Sum_probs=156.8
Q ss_pred HHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchh--
Q 001531 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD-- 290 (1058)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~~-- 290 (1058)
...+|+.+|+|.|.+. +..|.+|.+|+.++++++. ++||+||+++..+..++..+....+++|+++..+|..+
T Consensus 65 ~~~lE~~~a~LEg~~~--~~afsSGmaAI~~~~l~ll---~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~~~~ 139 (396)
T COG0626 65 RDALEEALAELEGGED--AFAFSSGMAAISTALLALL---KAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPGDDE 139 (396)
T ss_pred HHHHHHHHHHhhCCCc--EEEecCcHHHHHHHHHHhc---CCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCCChH
Confidence 3457789999999876 7789999999999887763 37999999999999999999888888999999988643
Q ss_pred -hhc-cC-CCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCC
Q 001531 291 -IDY-KS-GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 365 (1058)
Q Consensus 291 -l~~-l~-~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~ 365 (1058)
+++ +. ++|++|++..| |.+-.+.||++|+++||++|++++| ++.++.+++..|-++||||++.|+ |.+++.-
T Consensus 140 ~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvV-DNTfatP~~q~PL~~GaDIVvhSaTKyl~GHs-- 216 (396)
T COG0626 140 ALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVV-DNTFATPVLQRPLELGADIVVHSATKYLGGHS-- 216 (396)
T ss_pred HHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEE-ECCcccccccChhhcCCCEEEEeccccccCCc--
Confidence 333 44 68999999998 7899999999999999999988888 688999999999999999999998 8886421
Q ss_pred CCCceEEEEEehh-hhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHH
Q 001531 366 GGPHAAFLATSQE-YKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 444 (1058)
Q Consensus 366 GGP~~G~l~~~~~-~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~ 444 (1058)
---+|++.++.+ +..++ ....++.-|+ + + .-.- .|+..-|-+-|.
T Consensus 217 -Dvl~G~v~~~~~~~~~~~------------------------~~~~~~~~G~--~-----l-~p~d-A~l~lRGlkTL~ 262 (396)
T COG0626 217 -DVLGGVVLTPNEELYELL------------------------FFAQRANTGA--V-----L-SPFD-AWLLLRGLRTLA 262 (396)
T ss_pred -ceeeeEEecChHHHHHHH------------------------HHHHHhhcCC--C-----C-CHHH-HHHHHhccchHH
Confidence 112243433332 22211 0001111110 0 0 0111 144555555555
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeE
Q 001531 445 TIAQRVHGLAGTFALGLKKLGTVE 468 (1058)
Q Consensus 445 ~ia~~~~~~a~~l~~~L~~~G~~~ 468 (1058)
-..+++.++|..+++.|++.+.++
T Consensus 263 ~Rm~~~~~nA~~IA~~L~~~p~V~ 286 (396)
T COG0626 263 LRMERHNENALKIAEFLADHPKVK 286 (396)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeE
Confidence 666777899999999999875454
No 337
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.60 E-value=1.3e-13 Score=167.02 Aligned_cols=309 Identities=14% Similarity=0.105 Sum_probs=178.0
Q ss_pred hhcHHHHHHHHHHHHHHHh--CCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEE
Q 001531 627 AQGYQEMFNNLGEWLCTIT--GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1058)
Q Consensus 627 ~qG~~~~~~el~~~lael~--G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~v 704 (1058)
.+|..++...+.+++.+.. +++...+..++|++. ++.++++.+. .++++|+++...+..+...+.+.|.++
T Consensus 184 ~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~e--al~~~~~~l~-----~~Gd~Vli~~P~y~~y~~~~~~~g~~~ 256 (517)
T PRK13355 184 SKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSE--LINLSMSALL-----DDGDEVLIPSPDYPLWTACVNLAGGTA 256 (517)
T ss_pred CcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHH--HHHHHHHHhC-----CCCCEEEEcCCCCcCHHHHHHHCCCEE
Confidence 4676555544445443322 345455666666542 3334444432 356899999988877777788999999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCcc-cccC--c
Q 001531 705 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG--L 776 (1058)
Q Consensus 705 v~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~-al~g--l 776 (1058)
+.++++++ +.+|+++|+++++ +++++|++++|| .+|.+- +.+++|+++|++||+++++|+++.. ...+ .
T Consensus 257 v~~~~~~~~~~~~d~~~l~~~~~---~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~ 333 (517)
T PRK13355 257 VHYRCDEQSEWYPDIDDIRSKIT---SRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEH 333 (517)
T ss_pred EEeecCcccCCCCCHHHHHHhcC---cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCc
Confidence 99998764 5799999999996 789999999995 789875 2489999999999999999998631 1111 1
Q ss_pred CCCCccCCcE--E-EeCCccccccCCCCCCCceeEEEEe--CCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHH
Q 001531 777 TSPGYIGADV--C-HLNLHKTFCIPHGGGGPGMGPIGVK--KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1058)
Q Consensus 777 ~~pg~~GaDi--~-~~s~hKtf~~P~g~GGPg~G~i~~~--~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~ 851 (1058)
.....+..|+ + +.++.|+|++| |.++|++++. +++...+-..+ . . ......+.+..++.+
T Consensus 334 ~s~~~~~~~~~vi~~~S~SK~~~~~----G~RiG~~i~~~~~~~~~~~~~~l-~---------~-~~~~~~~~~~~~q~a 398 (517)
T PRK13355 334 TSIASLAPDLFCVTFSGLSKSHMIA----GYRIGWMILSGNKRIAKDYIEGL-N---------M-LANMRLCSNVPAQSI 398 (517)
T ss_pred ccHHHhCCCCeEEEEecchhhccCc----ccceEEEEeeCchhhHHHHHHHH-H---------H-HhcCcCCcChHHHHH
Confidence 1112222342 2 35678887644 8899999865 32211110000 0 0 000011211122221
Q ss_pred HHHHHHHHHHHHchhhHHH---HHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHH-HHH
Q 001531 852 ILPISYTYIAMMGSKGLTE---ASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA-KRL 927 (1058)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~---~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~-k~L 927 (1058)
+...+. +.+.+.+ ..++..++.+++.+.|+++..+.+..+++.++ ++++++.-.. ...+..+++ +.|
T Consensus 399 ----~~~aL~--~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~g~fy--~~~~l~~~~~-~~~~~~~~~~~ll 469 (517)
T PRK13355 399 ----VQTALG--GHQSVKDYLVPGGRVYEQRELVYNALNAIPGISAVKPKAAFY--IFPKIDVKKF-NIHDDEQFALDLL 469 (517)
T ss_pred ----HHHHhc--CCccHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCeeeE--EEeecCcccC-CCCCHHHHHHHHH
Confidence 111111 1111111 12344566788888887742332223344332 3345431000 001344444 556
Q ss_pred HHCCccc-cCCCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 928 MDYGFHG-PTMSWP--VPGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 928 ~~~Gi~~-~~~~~p--~~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
.++|+.+ +...|. .++++||++. .+.++|+..++.|.+.++.
T Consensus 470 ~~~gV~v~pg~~F~~~~~~~~Ris~~--~~~~~l~~a~~rl~~~~~~ 514 (517)
T PRK13355 470 HDKKVLIVQGTGFNWDKPDHFRVVYL--PRLEDLEDAMDRLADFFSY 514 (517)
T ss_pred HhCCEEEeCcchhCCCCcCEEEEEeC--CCHHHHHHHHHHHHHHHHH
Confidence 6889975 333343 4689999995 5677777777777776553
No 338
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.60 E-value=5.5e-13 Score=158.32 Aligned_cols=329 Identities=15% Similarity=0.158 Sum_probs=199.4
Q ss_pred ccccccccCCcccccccccccccccccCCC-CchhhhhcHHHHHHHHHHHHHHHhCCC----ceeeecCchHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPF-APADQAQGYQEMFNNLGEWLCTITGFD----SFSLQPNAGAAGEYAGLM 666 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~-~p~e~~qG~~~~~~el~~~lael~G~~----~~~l~~~sGa~ge~a~ll 666 (1058)
..+|+|.+++..++..+. ....+. ++. .+ .+...++.+.|+++++.. ...+..++|++++++++.
T Consensus 51 ~~lGh~~p~i~~ai~~q~-~~~~~~--~~~~~~-------~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~Alk 120 (442)
T TIGR00709 51 LALGHNHPNMKQKILDYL-QSGLPL--HTLDLT-------TPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIK 120 (442)
T ss_pred hcCCCCCHHHHHHHHHHH-HhccCc--cccccC-------cHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHH
Confidence 467888887777666652 221111 110 11 123457888999988532 234666899999988888
Q ss_pred HHHHHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCC-------c-----EEEEEcCCCCCCC--------CH----HHHH
Q 001531 667 VIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG-------M-----KIVSVGTDAKGNI--------NI----EELR 721 (1058)
Q Consensus 667 air~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G-------~-----~vv~V~~d~~g~i--------D~----e~L~ 721 (1058)
.+|.|. +|++|+ ...++||....+....| . .+..++.....+. +. +.++
T Consensus 121 lAr~~t------gr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (442)
T TIGR00709 121 LAKTYT------GRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFE 194 (442)
T ss_pred HHHHhc------CCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHH
Confidence 888762 244555 57789998776654332 1 1344444211111 11 2234
Q ss_pred HHHHh---cCCCeEEEEEEcC-CCccccc---ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc--------CCcE
Q 001531 722 KAAEA---NRDNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADV 786 (1058)
Q Consensus 722 ~~i~~---~~~~taaV~vt~P-n~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~--------GaDi 786 (1058)
+.+++ ..+++++|+++.. +..|++. ..+++|+++|++||+++|+|+++ .|+.+.|++ -+|+
T Consensus 195 ~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~----tGfGRtG~~~a~~~~gv~PDi 270 (442)
T TIGR00709 195 NFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQ----AGFGRSGTMFAFEHAGIEPDF 270 (442)
T ss_pred HHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc----cCCCCCCchhHHHHcCCCCcE
Confidence 44432 2357888888764 4556553 25899999999999999999984 566666543 2588
Q ss_pred EEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001531 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1058)
Q Consensus 787 ~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1058)
+++ .|.++ + |..+|.+.+++++..+.+.. .+ +++.|+++.++++.+.|..+.++
T Consensus 271 v~~--gK~l~----~-G~Pigav~~~~~~~~~~~~~----------------~~---~T~~gnpla~aaa~a~L~~i~~~ 324 (442)
T TIGR00709 271 VVM--SKAVG----G-GLPLAVLLIAPEFDAWQPAG----------------HT---GTFRGNQLAMVTGTEALNYWKDD 324 (442)
T ss_pred EEE--ccccc----C-CcccEEEEEchHHhccCCCc----------------CC---CCCCcCHHHHHHHHHHHHHHHhc
Confidence 885 47663 4 45588888887643222110 01 12345677777788888887777
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCccceEEEE-eccccccc---CC--C-CHHHHHHHHHHCCccc
Q 001531 867 GLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIV-DLRGLKNT---AG--I-EPEDVAKRLMDYGFHG 934 (1058)
Q Consensus 867 Gl~~~a~~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv-~~~~~~~~---~g--~-~~~~v~k~L~~~Gi~~ 934 (1058)
++.+ +...+.++|.++|+++ ++++ +.|. |. +.-+-+ +.+..+.. .. . ....+.+.+.++|+.+
T Consensus 325 ~l~~---~~~~~g~~l~~~L~~l~~~~~~v~~vrG~-Gl-~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~ 399 (442)
T TIGR00709 325 NLAQ---NAQERGERITSFLDDMIKEHPCIGNVRGR-GL-MQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLL 399 (442)
T ss_pred CHHH---HHHHHHHHHHHHHHHHHHhCCCeeeeecc-ce-EEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEE
Confidence 6655 3446677888888764 3322 2232 32 211112 11100000 00 0 1356778888999987
Q ss_pred cCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 935 PTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 935 ~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
.... ...+.||+.|+..+|++|||.+++++.+++.++
T Consensus 400 ~~~~-~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 436 (442)
T TIGR00709 400 ETGG-REGEVFRLLCPITIDQEECEEGISRFKQAVEEA 436 (442)
T ss_pred eecC-CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 4321 114789999999999999999999999998876
No 339
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.60 E-value=3e-13 Score=158.45 Aligned_cols=343 Identities=17% Similarity=0.168 Sum_probs=215.7
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcCCcc-cccccCCCCCC-CCChHHHHHHHH------hCCCcccccCCChhHH--hhH
Q 001531 139 MKFSKFDEGLTESQMIEHMQKLASMNKV-YKSFIGMGYYN-THVPPVILRNIM------ENPAWYTQYTPYQAEI--AQG 208 (1058)
Q Consensus 139 ~~lp~~~~~~sE~e~~~~~~~la~~n~~-~~~~lG~g~~~-~~~p~~i~~~i~------~~~~~~t~ytpyq~e~--sqG 208 (1058)
..|| .+|+++..+...|.+|+.++.. +.+-.|.|--. .+.-+.+.|.-. .|++-+ .--||.. |..
T Consensus 28 ~~~p--~~g~~~~~i~~~l~~l~~~~~~~~~~~~~~gere~rv~~~~~~~~~~~~~hgigr~~~l---~~~q~ka~gss~ 102 (444)
T TIGR03531 28 RKIP--EEGWDDETIELFLHELSVMDTNNFPNNVGVGEREGRVFSKLVARRHYRFCHGIGRSGDL---VAPQPKAAGSSL 102 (444)
T ss_pred CcCC--ccCCCHHHHHHHHHHHhcCCcCCCccccCcCcccceeechhhhhcccceecCCCCcccc---cccCccccCccH
Confidence 3677 6899999999999999987643 44445777422 223332321111 112212 2345553 333
Q ss_pred HHHHHHHHHHHHHHhcCCCC-cceEeecchHH-HHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 001531 209 RLESLLNFQTMIADLTGLPM-SNASLLDEGTA-AAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 286 (1058)
Q Consensus 209 ~l~~l~e~q~~ia~L~G~~~-anasl~~~~Ta-a~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v 286 (1058)
......+++..+++++|.+. ..+.+++++|+ +...++++++..+.++++||+++..|.++.+.+.. .|++++.+
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~----~G~~pv~V 178 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAIST----AGFEPRVI 178 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHH----cCCeEEEe
Confidence 56677888999999999973 34778899995 43334455543211589999999999999998754 47777777
Q ss_pred Cc-----------hhhhc-cCC---CEeEEEEEcCCCc--eeeccHHHHHHHHHhcCcEEEEEeccccccCCC------C
Q 001531 287 DL-----------KDIDY-KSG---DVCGVLVQYPGTE--GEVLDYGDFIKNAHANGVKVVMATDLLALTILK------P 343 (1058)
Q Consensus 287 ~~-----------~~l~~-l~~---~t~~V~v~~pn~~--G~i~dl~~I~~~a~~~galliV~a~~~slg~l~------~ 343 (1058)
|. ++|++ |++ ++..+++.+|+++ |..+|+++|+++|+++|++++|++ .++++... .
T Consensus 179 d~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDa-Ayg~~~~~~~~~~~~ 257 (444)
T TIGR03531 179 ETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNN-AYGLQSNKYMELINK 257 (444)
T ss_pred eeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEEC-cCcCcChhhhhhhhc
Confidence 62 34555 654 5566777777655 478999999999999999999953 33432211 1
Q ss_pred CCccc-ceEEEecC-cccccccCCCCCceEEEEE-ehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCc
Q 001531 344 PGELG-ADIVVGSA-QRFGVPMGYGGPHAAFLAT-SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNI 420 (1058)
Q Consensus 344 p~~~G-aDivvgs~-k~lg~P~~~GGP~~G~l~~-~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni 420 (1058)
..+.| +|+++.+. |.|..|.+ .|++.+ ++++.+.+.. . | +. |. ++
T Consensus 258 g~~~Grad~vv~s~hK~l~~pg~-----Gg~I~~~d~el~~~i~~-------~------y---------~g-~~---~~- 305 (444)
T TIGR03531 258 AIKVGRVDAVVSSTDKNFMVPVG-----GAIIYSFDENFIQEISK-------S------Y---------PG-RA---SA- 305 (444)
T ss_pred cccccCCCeEEEeCccCCCCCCC-----EEEEEECCHHHHHHHHH-------h------c---------cC-CC---CC-
Confidence 23355 79999998 88876622 366666 4556554410 0 0 00 11 01
Q ss_pred cchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcC----CCeEEcCC---CCccEEEEec--CC-HHHHHH
Q 001531 421 CTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL----GTVEVQGL---PFFDTVKVKC--AD-AHAIAS 490 (1058)
Q Consensus 421 ~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~----G~~~l~~~---~~~~~v~i~~--~~-~~~l~~ 490 (1058)
.. .+.+.+.+..+|.+|++++.++..++++++.+.|+++ | -++++. +..--++++. +. ...+..
T Consensus 306 ---s~--~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~-~~~~~~~~n~is~~~~~~~~~~~~~~~~g~ 379 (444)
T TIGR03531 306 ---SP--SLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHG-ERLLDTPENPISSAMTLSTLKGKDPTMLGS 379 (444)
T ss_pred ---hH--HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-cEeecCCCCceeEEEecccccccCHHHHHH
Confidence 11 2223333468899999999999999999999999875 4 566532 2221233321 12 778888
Q ss_pred HHHHcCcee-eecc-----------------------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 491 AAYKIEMNL-RVVD-----------------------SNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 491 ~L~~~GI~~-~~~~-----------------------~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
.|..++|.- +.+. ...+.+......+++|+|.|++.|..
T Consensus 380 ~l~~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~ 442 (444)
T TIGR03531 380 MLYSRRVTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEK 442 (444)
T ss_pred HHHhCCCCCceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhh
Confidence 888777731 1000 01244445556788999999888853
No 340
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.60 E-value=1.3e-13 Score=164.11 Aligned_cols=283 Identities=12% Similarity=0.002 Sum_probs=179.0
Q ss_pred HHHHHHhcCCCCcceEe---ecchHHHHHHHHHHhccccCCCCEEEEcC------CCCHHHHHHHHHhhcCCCeEE----
Q 001531 217 QTMIADLTGLPMSNASL---LDEGTAAAEAMAMCNNIQKGKKKTFIIAS------NCHPQTIDICITRADGFDIKV---- 283 (1058)
Q Consensus 217 q~~ia~L~G~~~anasl---~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~------~~Hps~~~~~~~~a~~~gi~v---- 283 (1058)
++..+++++.+.+...+ ..+|+.++.++++++. ++||+|++.+ ..|.+.....+. ...++.+
T Consensus 86 ~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~---~pgD~Il~~d~~~gGhl~H~~~~~g~~~--s~~~~~~~~~~ 160 (475)
T PLN03226 86 QKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALL---QPHDRIMGLDLPHGGHLSHGYQTDGKKI--SATSIYFESMP 160 (475)
T ss_pred HHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhC---CCCCEEEECCCCcCcchhhhhhhccccc--ccceEEEEeee
Confidence 45677888887643321 2688999999998873 3899999854 445554443221 1122221
Q ss_pred -EE------eCchhhhc-cC-CCEeEEEEEcCCCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCc----ccce
Q 001531 284 -VV------SDLKDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGE----LGAD 350 (1058)
Q Consensus 284 -~~------v~~~~l~~-l~-~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~----~GaD 350 (1058)
.+ +|+++|++ +. .+++.|++.. +.+|...|+++|.++||++|++++|| ..++.|++...+. .++|
T Consensus 161 y~~~~~~g~iD~d~Le~~l~~~~pklIv~~~-S~~s~~~D~a~i~~ia~~~ga~LlvD-~AH~~Gli~~~~~~~p~~~~D 238 (475)
T PLN03226 161 YRLDESTGLIDYDKLEKKAMLFRPKLIIAGA-SAYPRDWDYARMRKIADKVGALLMCD-MAHISGLVAAQEAASPFEYCD 238 (475)
T ss_pred eeecCCCCCcCHHHHHHHHhhcCCeEEEEec-CcCCCccCHHHHHHHHHHcCCEEEEE-chhhhCcccCCCCCCCCCCCe
Confidence 22 26677776 43 3556555543 45788889999999999999999994 3556665532211 2799
Q ss_pred EEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeeccccccccc--ccccCCCccchhHHH
Q 001531 351 IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIR--RDKATSNICTAQALL 427 (1058)
Q Consensus 351 ivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~ir--RekaTsni~t~~~l~ 427 (1058)
++++++ |+|++| ..|++++++++++.+.+. .|...| |.... +..+ ...++.+. ..+.
T Consensus 239 iv~~t~hK~L~GP------~Gg~I~~~~~~~~~~~~g-~~~~~d------~~~~i----~~a~~~~~~g~p~~---~~ia 298 (475)
T PLN03226 239 VVTTTTHKSLRGP------RGGMIFFRKGPKPPKGQG-EGAVYD------YEDKI----NFAVFPGLQGGPHN---HTIA 298 (475)
T ss_pred EEEecCcccccCC------CceEEEEchhhcccccCC-CccHHH------HHHHh----ccccCCccCCCchH---HHHH
Confidence 999998 878544 347899988765443211 010000 10000 0000 01222232 3444
Q ss_pred HHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC-CCccEEEEecC--C--HHHHHHHHHHcCceeee-
Q 001531 428 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCA--D--AHAIASAAYKIEMNLRV- 501 (1058)
Q Consensus 428 a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~-~~~~~v~i~~~--~--~~~l~~~L~~~GI~~~~- 501 (1058)
++.+++ .++...|.+++++++.+++++|++.|.+.| ++++.. ..-+.+.|.+. + ..++.+.|.+.||.+..
T Consensus 299 al~aAl--~~i~~~~~~~~~~~~~~na~~L~~~L~~~G-~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~ 375 (475)
T PLN03226 299 ALAVAL--KQAMTPEFKAYQKQVKANAAALANRLMSKG-YKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKN 375 (475)
T ss_pred HHHHHH--HHHhCcCHHHHHHHHHHHHHHHHHHHHhCC-CEEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCC
Confidence 555554 566677889999999999999999999988 998842 22233444442 3 67899999999997743
Q ss_pred --------ccCCeEEE----EeccCCCHHHHHHHHHHHhC
Q 001531 502 --------VDSNTVTA----SFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 502 --------~~~~~lri----s~~~~~t~edid~ll~al~~ 529 (1058)
+.+..||+ -.+...+++|++++.+.|..
T Consensus 376 ~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~ 415 (475)
T PLN03226 376 AVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHR 415 (475)
T ss_pred CCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHH
Confidence 23567888 45667788999999998853
No 341
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.59 E-value=4.2e-13 Score=157.47 Aligned_cols=215 Identities=23% Similarity=0.237 Sum_probs=152.6
Q ss_pred HHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---
Q 001531 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1058)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~--- 289 (1058)
..++++.+|++.|.+. +.++.+|++++..++.++ + ++||+||++...|+.+...+...++..|++++.+|.+
T Consensus 67 ~~~le~~lA~l~g~~~--~i~~~sG~~Al~~~l~~l-l--~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~ 141 (403)
T PRK07503 67 LALLEQRMASLEGGEA--AVALASGMGAITATLWTL-L--RPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLTDPA 141 (403)
T ss_pred HHHHHHHHHHHhCCCc--EEEEcCHHHHHHHHHHHH-c--CCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCCCHH
Confidence 3457789999999875 678889998888777665 3 3899999999999877776665567789999998764
Q ss_pred hhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCC
Q 001531 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1058)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1058)
++++ ++++|++|++.+| |++|.+.|+++|+++||++|+++++| +.++.+....|..+|+|++++|. |.|+++ |
T Consensus 142 ~l~~~i~~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD-~a~a~~~~~~~l~~g~Di~v~S~tK~l~g~---g 217 (403)
T PRK07503 142 ALKAAISDKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVD-NTYCTPYLQRPLELGADLVVHSATKYLGGH---G 217 (403)
T ss_pred HHHHhcCccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCCEEEccccccccCC---C
Confidence 4555 7788999999888 78999999999999999999999994 45665555566678999999998 877632 3
Q ss_pred CCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHH
Q 001531 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1058)
Q Consensus 367 GP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~i 446 (1058)
+..+|++..++++.+++.. .+ . +. ....|. +.+ .|+ +...+-+-+...
T Consensus 218 d~~gG~v~~~~~l~~~l~~--~~---------------------~-~~--~~g~~~-s~~---~a~--l~l~~L~tl~~r 265 (403)
T PRK07503 218 DITAGLVVGGKALADRIRL--EG---------------------L-KD--MTGAVM-SPF---DAF--LLMRGLKTLALR 265 (403)
T ss_pred ceeEEEEEcCHHHHHHHHh--hh---------------------H-Hh--CcCCCC-CHH---HHH--HHHcCcchHHHH
Confidence 2336888877776655410 00 0 00 001111 111 222 233333444445
Q ss_pred HHHHHHHHHHHHHHHhcCCCeE
Q 001531 447 AQRVHGLAGTFALGLKKLGTVE 468 (1058)
Q Consensus 447 a~~~~~~a~~l~~~L~~~G~~~ 468 (1058)
.++..+++..+.+.|++.+.++
T Consensus 266 ~~~~~~na~~~a~~L~~~p~v~ 287 (403)
T PRK07503 266 MDRHCASAQAVAEWLARHPAVE 287 (403)
T ss_pred HHHHHHHHHHHHHHHHhCCCcc
Confidence 5667789999999999875454
No 342
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.59 E-value=2.2e-13 Score=160.70 Aligned_cols=308 Identities=12% Similarity=0.095 Sum_probs=181.7
Q ss_pred hcHHHHHHHHHHHHHHHhC--------CCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHh
Q 001531 628 QGYQEMFNNLGEWLCTITG--------FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAM 699 (1058)
Q Consensus 628 qG~~~~~~el~~~lael~G--------~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~ 699 (1058)
+|..++...+.+++.+.++ ++...+..++|++. ++.++++.+. .++++|+++...|..+...++.
T Consensus 75 ~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~--al~~~~~~~~-----~~gd~vlv~~P~y~~~~~~~~~ 147 (412)
T PTZ00433 75 VGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSH--AILMALTALC-----DEGDNILVPAPGFPHYETVCKA 147 (412)
T ss_pred CCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHH--HHHHHHHHhc-----CCCCEEEEccCCcccHHHHHHH
Confidence 5655555445555544332 33445555555542 2333444331 2567899998888777777899
Q ss_pred CCcEEEEEcCCC--CCCCCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCccc-c
Q 001531 700 CGMKIVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-Q 773 (1058)
Q Consensus 700 ~G~~vv~V~~d~--~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~a-l 773 (1058)
.|++++.++.++ ++.+|+++|+++++ +++++|++++|| .+|.+- +++++|+++|+++|+++++|+++.-- .
T Consensus 148 ~g~~~~~i~~~~~~~~~~d~~~l~~~~~---~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~ 224 (412)
T PTZ00433 148 YGIEMRFYNCRPEKDWEADLDEIRRLVD---DRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVF 224 (412)
T ss_pred cCCEEEEEecCccccCcCCHHHHHHHhc---cCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEecccccccc
Confidence 999999999864 35799999999886 678999999995 689763 36899999999999999999986411 1
Q ss_pred cCcC-CC-Ccc--CCc-EEEeCCccccccCCCCCCCceeEEEEe-C-----CCCCCCCCCCcccCCCCCCCCCCCCCCCC
Q 001531 774 VGLT-SP-GYI--GAD-VCHLNLHKTFCIPHGGGGPGMGPIGVK-K-----HLAPFLPSHPVVSTGGIPAPEKSQPLGTI 842 (1058)
Q Consensus 774 ~gl~-~p-g~~--GaD-i~~~s~hKtf~~P~g~GGPg~G~i~~~-~-----~l~~~lpg~~vg~~~d~g~~~~~~~t~~i 842 (1058)
.+-. .+ ..+ ..+ |++.++.|+|+.| |-++|++.+. + ++...+-. + . ....++
T Consensus 225 ~~~~~~~~~~~~~~~~~i~~~SfSK~~~~p----GlRlG~~i~~~p~~~~~~~~~~~~~--~----------~-~~~~~~ 287 (412)
T PTZ00433 225 NGATFTSVADFDTTVPRVILGGTAKNLVVP----GWRLGWLLLVDPHGNGGDFLDGMKR--L----------G-MLVCGP 287 (412)
T ss_pred CCCCccchhhccCCCceEEEccchhhcCCC----CeeEEEEEEeCCcccHHHHHHHHHH--H----------h-hccCCC
Confidence 1100 01 111 112 5567788887644 7899999972 2 12211100 0 0 000111
Q ss_pred CccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCC-CCHH
Q 001531 843 AAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAG-IEPE 921 (1058)
Q Consensus 843 ~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g-~~~~ 921 (1058)
+ ...+. ++..++..-..+-+++..+...++.+++.+.|++...+.+..+.+..+ ++++++.-.. .+ .+..
T Consensus 288 ~--~~~q~----a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f--~~~~l~~~~~-~~~~~~~ 358 (412)
T PTZ00433 288 C--SVVQA----ALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSMF--LMSRLDLEKF-RDIKSDV 358 (412)
T ss_pred C--hHHHH----HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCeeEE--EEEEechhhc-CCCCCHH
Confidence 1 11121 112222221122344555566677888888887642222212223222 3445431000 01 2467
Q ss_pred HHHHHHH-HCCcccc-CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001531 922 DVAKRLM-DYGFHGP-TMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1058)
Q Consensus 922 ~v~k~L~-~~Gi~~~-~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~ 973 (1058)
+++++|. ++||.+. ...|..++.+||++.. .++++++.++.|.++++..+
T Consensus 359 ~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~l~~al~~l~~~~~~~~ 410 (412)
T PTZ00433 359 EFYEKLLEEENVQVLPGEIFHMPGFTRLTISR--PVEVLREAVERIKAFCERHK 410 (412)
T ss_pred HHHHHHHHhcCEEEeCccccCCCCeEEEEecC--CHHHHHHHHHHHHHHHHHhc
Confidence 8999987 5899754 3335446899999974 47788888888887766543
No 343
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.59 E-value=1.3e-13 Score=161.45 Aligned_cols=216 Identities=16% Similarity=0.228 Sum_probs=146.6
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHH----HHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~----a~~~G~~vv~V~~ 709 (1058)
..++++.++++.|.+.+.+ .++|..+..+++++. . +++++|+++...++.+... +...|++++.++.
T Consensus 67 ~~~Le~~lA~l~G~~~~~~-~~sG~~Ai~~~l~~~---l-----~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~ 137 (398)
T PRK07504 67 VDMFEKRMCALEGAEDARA-TASGMAAVTAAILCQ---V-----KAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDG 137 (398)
T ss_pred HHHHHHHHHHHhCCCeeeE-ecCHHHHHHHHHHHH---h-----CCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECC
Confidence 4578899999999987654 556766553333221 1 2568899988766654332 3457999998863
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
+|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++... .+..|.++|+|+++
T Consensus 138 -----~d~e~l~~ai~---~~tklV~lesp~NptG~v~-dl~~I~~la~~~gi~lvvD~a~a~~--~~~~~~~~gaDivv 206 (398)
T PRK07504 138 -----LDLDNWEKAVR---PNTKVFFLESPTNPTLEVI-DIAAVAKIANQAGAKLVVDNVFATP--LFQKPLELGAHIVV 206 (398)
T ss_pred -----CCHHHHHHhcC---cCceEEEEECCCCCCcEec-CHHHHHHHHHHcCCEEEEECCcccc--ccCCchhhCCCEEE
Confidence 79999999996 789999999995 688887 7999999999999999999986532 24567788999999
Q ss_pred eCCccccccCCCCCCCce-eEEEEeCCCCCC-CCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001531 789 LNLHKTFCIPHGGGGPGM-GPIGVKKHLAPF-LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~-G~i~~~~~l~~~-lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1058)
.|+||+|+.+ |.++ |+++.++++... +.... + ..+... ++ . .|| +...|-+
T Consensus 207 ~S~sK~l~g~----g~~~GG~vv~~~~~i~~~~~~~~-----------~--~~g~~~-s~----~---~A~--~~l~~L~ 259 (398)
T PRK07504 207 YSATKHIDGQ----GRCLGGVVLSDKAWIEEHLQDYF-----------R--HTGPSL-SP----F---NAW--TLLKGLE 259 (398)
T ss_pred eeccccccCC----ccceEEEEEeCcHHHHHHHHHHH-----------H--HhCCCC-CH----H---HHH--HHHhccc
Confidence 9999998522 3334 567666543321 11000 0 001111 11 1 122 2334445
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc---CCeeecc
Q 001531 867 GLTEASKIAILNANYMAKRLEKH---YPILFRG 896 (1058)
Q Consensus 867 Gl~~~a~~~~~~a~yL~~~L~~~---~~v~~~g 896 (1058)
-+....++..+++..+++.|+++ -.|.|+|
T Consensus 260 tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~ 292 (398)
T PRK07504 260 TLPVRVRQQTESAAAIADFLAGHPKVARVIYPG 292 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCccEEECCC
Confidence 56667777789999999999875 2455665
No 344
>PRK07683 aminotransferase A; Validated
Probab=99.59 E-value=2.2e-13 Score=159.30 Aligned_cols=301 Identities=16% Similarity=0.151 Sum_probs=182.1
Q ss_pred hcHHHHHHHHHHHHHHHhCC--Cce-eeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEE
Q 001531 628 QGYQEMFNNLGEWLCTITGF--DSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1058)
Q Consensus 628 qG~~~~~~el~~~lael~G~--~~~-~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~v 704 (1058)
+|..++..++.+++.+..|. +.. .+..++|++. +..++++.+. .++++|+++.+.+..+...+.+.|+++
T Consensus 65 ~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~--al~~~~~~l~-----~~gd~Vl~~~p~y~~~~~~~~~~g~~~ 137 (387)
T PRK07683 65 AGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASE--AIDIAFRTIL-----EPGTEVILPAPIYPGYEPIIRLCGAKP 137 (387)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHH--HHHHHHHHhC-----CCCCEEEEcCCCccchHHHHHHcCCEE
Confidence 56666666666666555565 333 4444445432 2233333321 246789999886666666788899999
Q ss_pred EEEcCCCC-CCCCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCcccc-cCcCCC
Q 001531 705 VSVGTDAK-GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLTSP 779 (1058)
Q Consensus 705 v~V~~d~~-g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~al-~gl~~p 779 (1058)
+.++.+++ ..+|+++++++++ +++++|++.+|+ .+|.+- .++++|+++|+++|+++++|+++.... ..-..+
T Consensus 138 ~~~~~~~~~~~~~~~~l~~~~~---~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~ 214 (387)
T PRK07683 138 VFIDTRSTGFRLTAEALENAIT---EKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTS 214 (387)
T ss_pred EEeecCcccCCCCHHHHHHhcC---cCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCC
Confidence 99998765 4679999999986 678899999985 789873 359999999999999999999864211 110001
Q ss_pred -Cc----cCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHH
Q 001531 780 -GY----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILP 854 (1058)
Q Consensus 780 -g~----~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~ 854 (1058)
.. .+-.+++.++.|.|+.| |-++|++.++++++..+-.. ......+.+...+.
T Consensus 215 ~~~~~~~~~~vi~~~s~SK~~~~p----GlRiG~i~~~~~l~~~~~~~--------------~~~~~~~~~~~~q~---- 272 (387)
T PRK07683 215 IAHFPEMREKTIVINGLSKSHSMT----GWRIGFLFAPSYLAKHILKV--------------HQYNVTCASSISQY---- 272 (387)
T ss_pred hhhccCCcCCeEEEeeccccccCc----cceeEEEEcCHHHHHHHHHH--------------HHhccCCCChHHHH----
Confidence 11 12346677888988655 67899999987655443210 00011121111221
Q ss_pred HHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHH-HHHCCcc
Q 001531 855 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR-LMDYGFH 933 (1058)
Q Consensus 855 ~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~-L~~~Gi~ 933 (1058)
++...+ ..|..-+++..+....+++++.+.|++. .+.+..+++.++ +++.++. .+.+..++++. |.++||.
T Consensus 273 ~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~ll~~~gI~ 344 (387)
T PRK07683 273 AALEAL-TAGKDDAKMMRHQYKKRRDYVYNRLISM-GLDVEKPTGAFY--LFPSIGH----FTMSSFDFALDLVEEAGLA 344 (387)
T ss_pred HHHHHH-hCChHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCeeEE--EEEeccc----CCCCHHHHHHHHHHhCCEE
Confidence 111222 1233334445555567788888888764 222212223332 3444431 13456677766 4678998
Q ss_pred cc-CCCC-C-CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001531 934 GP-TMSW-P-VPGTLMIEPTESESKEELDRYCDALISIRE 970 (1058)
Q Consensus 934 ~~-~~~~-p-~~~~Lris~te~~t~eeid~fi~aL~~i~~ 970 (1058)
+. ...| + ..+.+||++.. +++++...++.|.++++
T Consensus 345 v~pg~~f~~~~~~~~Ri~~~~--~~~~~~~al~~l~~~l~ 382 (387)
T PRK07683 345 VVPGSAFSEYGEGYVRLSYAY--SIETLKEGLDRLEAFLQ 382 (387)
T ss_pred EcCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHH
Confidence 63 3333 2 25799999974 57777777777776654
No 345
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.59 E-value=1.7e-13 Score=161.63 Aligned_cols=142 Identities=23% Similarity=0.271 Sum_probs=116.4
Q ss_pred HHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC-c---
Q 001531 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD-L--- 288 (1058)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~-~--- 288 (1058)
..++|+.+|++.|.+ .+..+.+|++++.++++++ + ++||+||++...|.++...+...++..|+++++++ .
T Consensus 71 ~~~le~~la~l~g~~--~~v~fsSG~~Ai~~al~~l-l--~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~~d~ 145 (437)
T PRK05613 71 VEALENRIASLEGGV--HAVAFASGQAAETAAILNL-A--GAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVENPDDP 145 (437)
T ss_pred HHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHh-c--CCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECCCCCH
Confidence 456789999999985 4778889998888777766 2 37999999999999997766555667899999986 3
Q ss_pred hhhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecCcccc
Q 001531 289 KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSAQRFG 360 (1058)
Q Consensus 289 ~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~k~lg 360 (1058)
+++++ ++++|++|++..+ |.+|.+.||++|+++||++|++++|| ..++.+.+..|.++|+|++++|++++.
T Consensus 146 e~l~~~l~~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD-~t~a~g~~~~p~~~GaDivv~S~~K~l 218 (437)
T PRK05613 146 ESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVD-NTIATAALVRPLELGADVVVASLTKFY 218 (437)
T ss_pred HHHHHhCCccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEE-CCCccccccChHHhCCCEEEeecccee
Confidence 45666 7888998888765 78999999999999999999999994 356777667788999999999994443
No 346
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.59 E-value=2.3e-13 Score=148.01 Aligned_cols=354 Identities=19% Similarity=0.237 Sum_probs=216.5
Q ss_pred HhcCccCcCcccccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCCc----eeeecC
Q 001531 580 LQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDS----FSLQPN 655 (1058)
Q Consensus 580 l~~~~~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~~----~~l~~~ 655 (1058)
++++|+.....|-.||||- .|.+.+-.|-.+ ++.-+-| .-++..-.|+..-+.+|+|+ +++||.
T Consensus 46 IaSENFts~aVmeAlGS~l--tNKYSEGyPG~R--YYGGne~--------ID~iE~LCq~RALeaF~ldp~kWGVNVQp~ 113 (477)
T KOG2467|consen 46 IASENFTSRAVMEALGSCL--TNKYSEGYPGAR--YYGGNEY--------IDQIELLCQKRALEAFGLDPEKWGVNVQPY 113 (477)
T ss_pred eecccchHHHHHHHHhHHh--hcccccCCCccc--ccCcchH--------HHHHHHHHHHHHHHHhCCCHHHCceeeccC
Confidence 5677766544455789874 366777765433 2211111 11223334566778899996 689999
Q ss_pred chHHHHHHHHHHHHHHHHHcCCCCCCEEEE---cCCCCCccHHHHHhCC-------cEEEEEcCCC-CCCCCHHHHHHHH
Q 001531 656 AGAAGEYAGLMVIRAYHKARGDHHRNVCII---PVSAHGTNPATAAMCG-------MKIVSVGTDA-KGNINIEELRKAA 724 (1058)
Q Consensus 656 sGa~ge~a~llair~y~~~~G~~~r~~Vli---p~saHg~~pa~a~~~G-------~~vv~V~~d~-~g~iD~e~L~~~i 724 (1058)
||+-+++++..++.. +.++|.- |+.-|-+|-....... ++-....+|+ .|-||.|.|++..
T Consensus 114 SGSPANfavYtall~--------Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A 185 (477)
T KOG2467|consen 114 SGSPANFAVYTALLK--------PHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTA 185 (477)
T ss_pred CCCchhhHHHhhhcC--------CCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHH
Confidence 999999887777642 3455653 4444434432211111 1222234454 4999999999988
Q ss_pred HhcCCCeEEEEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCcccc---cCcCCCCccCCcEEEeCCccccccCCCC
Q 001531 725 EANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ---VGLTSPGYIGADVCHLNLHKTFCIPHGG 801 (1058)
Q Consensus 725 ~~~~~~taaV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al---~gl~~pg~~GaDi~~~s~hKtf~~P~g~ 801 (1058)
...+++ .|+.....+-=.+ |..++.+||.+.|+.+.+|-||..++ +...+|.+ -+||++.+.||++
T Consensus 186 ~~frPk--~iiaG~SaY~R~~--DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFe-y~DiVTTTTHKsL------ 254 (477)
T KOG2467|consen 186 TLFRPK--LIIAGTSAYSRLI--DYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFE-YCDIVTTTTHKSL------ 254 (477)
T ss_pred HhcCCc--EEEeccccchhhc--cHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCccc-ccceeeccccccc------
Confidence 754444 4544433343444 69999999999999999999885433 33445655 4899999999998
Q ss_pred CCCceeEEEEeCCCCCCCCCC--CcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHH
Q 001531 802 GGPGMGPIGVKKHLAPFLPSH--PVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNA 879 (1058)
Q Consensus 802 GGPg~G~i~~~~~l~~~lpg~--~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a 879 (1058)
.||+.|.|..|+.....-|+. -+.. |.-.+-.-.-.+...+.|.++ .+++.|.+ +..-....+++..++.+.|+
T Consensus 255 RGPRg~mIFyRkGvk~~~~k~g~~i~y--dlE~kINfaVFP~lQGGPHNh-tIaalAvA-LkQa~tpefk~Yq~qV~~Na 330 (477)
T KOG2467|consen 255 RGPRGAMIFYRKGVKSIKPKQGKEILY--DLEDKINFAVFPGLQGGPHNH-TIAALAVA-LKQAMTPEFKEYQKQVLKNA 330 (477)
T ss_pred cCCcceeEEEeccCCcCCCCCCCccee--chhhhhhhhccccccCCCCcc-hHHHHHHH-HHhhCCHHHHHHHHHHHHHH
Confidence 799999999997554433221 0000 000000000011111112222 22223333 33334445899999999999
Q ss_pred HHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCC------CCCEEEEEcCCC
Q 001531 880 NYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP------VPGTLMIEPTES 952 (1058)
Q Consensus 880 ~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p------~~~~Lris~te~ 952 (1058)
+.|+++|.+. |+++.. |...|.+.+|+++ .|++...+-+-|..-+|.++.-.-| .|+.+||...-.
T Consensus 331 kala~~l~~~Gy~lvtg---GTDnHlvLvDLr~----~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAm 403 (477)
T KOG2467|consen 331 KALASALISRGYKLVTG---GTDNHLVLVDLRP----KGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAM 403 (477)
T ss_pred HHHHHHHHHcCceEecC---CccceEEEEeccc----cCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhh
Confidence 9999999875 888653 4567888999986 4788777777776667765432111 368899876655
Q ss_pred CC----HHHHHHHHHHHHHHHHHHHHH
Q 001531 953 ES----KEELDRYCDALISIREEIAQI 975 (1058)
Q Consensus 953 ~t----~eeid~fi~aL~~i~~e~~~~ 975 (1058)
+| ++|.++..+-+.+.++...++
T Consensus 404 TsRG~~e~df~~v~~fi~~av~i~~~~ 430 (477)
T KOG2467|consen 404 TSRGFGEEDFEKVADFIDRAVKIALEI 430 (477)
T ss_pred cccCccHHHHHHHHHHHHHHHHHHHHH
Confidence 54 577777777777766655554
No 347
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.59 E-value=1.9e-13 Score=158.54 Aligned_cols=228 Identities=17% Similarity=0.164 Sum_probs=157.0
Q ss_pred HHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---
Q 001531 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1058)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~--- 289 (1058)
..++++.+|++.|.+. +.++.+|++++.+++ ++ . ++||+||++...++.+...+...++..|++++.+|..
T Consensus 54 ~~~le~~la~l~g~~~--~~~~~sG~~ai~~~~-~l-l--~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~ 127 (366)
T PRK08247 54 RGVLEQAIADLEGGDQ--GFACSSGMAAIQLVM-SL-F--RSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTASLK 127 (366)
T ss_pred HHHHHHHHHHHhCCCc--EEEEcCHHHHHHHHH-HH-h--CCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCCCHH
Confidence 4567789999999987 578889998877654 33 2 3799999999999998888776667789999998864
Q ss_pred hhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCC
Q 001531 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1058)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1058)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|+++++| +..+.+++..|.++|+||+++|. |.++++ |
T Consensus 128 ~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD-~t~~~~~~~~p~~~g~di~i~S~sK~~~g~---~ 203 (366)
T PRK08247 128 AIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVD-NTFYTPVLQRPLEEGADIVIHSATKYLGGH---N 203 (366)
T ss_pred HHHHhcccCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEE-CCCccccccCchhcCCcEEEeecceeccCC---C
Confidence 4555 7788999999998 68999999999999999999999994 56666666667788999999998 887633 2
Q ss_pred CCceEEEEEe-hhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHH
Q 001531 367 GPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1058)
Q Consensus 367 GP~~G~l~~~-~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ 445 (1058)
+--+|++.++ +++.+.+. ..+.. ...|. +++ .+ |+...+-+-+..
T Consensus 204 d~~~G~iv~~~~~l~~~~~-------------------------~~~~~---~g~~~-s~~---~a--~l~~~~l~tl~~ 249 (366)
T PRK08247 204 DVLAGLVVAKGQELCERLA-------------------------YYQNA---AGAVL-SPF---DS--WLLIRGMKTLAL 249 (366)
T ss_pred ceeeeEEecChHHHHHHHH-------------------------HHHHh---cCCCC-ChH---HH--HHHHhccCcHHH
Confidence 2234677765 44443320 00000 11111 111 11 223334445556
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeEEc-CCCCccEEEEecCC
Q 001531 446 IAQRVHGLAGTFALGLKKLGTVEVQ-GLPFFDTVKVKCAD 484 (1058)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~G~~~l~-~~~~~~~v~i~~~~ 484 (1058)
..++..+++..+++.|++.+++..+ .++.-.-++|.+++
T Consensus 250 r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf~~~~ 289 (366)
T PRK08247 250 RMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSFRLQD 289 (366)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEEEECC
Confidence 6667789999999999998547643 22122234454443
No 348
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.59 E-value=2e-13 Score=157.38 Aligned_cols=294 Identities=15% Similarity=0.081 Sum_probs=187.6
Q ss_pred HHHHHHHHHHHHHhcCCCCcc--eEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHH-HhhcCCCe-EEEE
Q 001531 210 LESLLNFQTMIADLTGLPMSN--ASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICI-TRADGFDI-KVVV 285 (1058)
Q Consensus 210 l~~l~e~q~~ia~L~G~~~an--asl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~-~~a~~~gi-~v~~ 285 (1058)
.+.+.+.++.+.+|++.+..+ +.+..+||+++||+++.+- . .+++++++.. .|... |. ..++..|+ ++..
T Consensus 38 ~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~-~-~~g~~vLv~g-~FG~r---~~~eia~~~g~~~v~~ 111 (374)
T TIGR01365 38 KEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSML-G-CRGVDVLAWE-SFGKG---WVTDVTKQLKLPDVRV 111 (374)
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcC-C-CCCCeEEEEC-HHHHH---HHHHHHHhcCCCCcEE
Confidence 467778888999999975332 4456889999999998863 1 2678888864 44332 22 33555677 3555
Q ss_pred eCch-----hhhccCCCEeEEEEEc-CCCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cc
Q 001531 286 SDLK-----DIDYKSGDVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QR 358 (1058)
Q Consensus 286 v~~~-----~l~~l~~~t~~V~v~~-pn~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~ 358 (1058)
++.+ +++++..+ +.|++++ -+++|+..|+++|++.. ++++++||+ ..++|...-.-+ ++|+++.++ |.
T Consensus 112 l~~~~g~~~~~~~ve~~-~~v~~vhnETSTGv~npv~~i~~~~--~~~lliVDa-vSs~g~~~l~~d-~iDv~~tgsQK~ 186 (374)
T TIGR01365 112 LEAEYGKLPDLKKVDFK-NDVVFTWNGTTSGVRVPNGDFIPAD--REGLTICDA-TSAAFAQDLDYH-KLDVVTFSWQKV 186 (374)
T ss_pred EcCCCCCCCCHHHcCCC-CCEEEecCCCchheecccccccccc--CCCcEEEEc-cchhcCCCCChh-HCcEEEEechhc
Confidence 5432 12223222 2244554 58999999998877433 488999954 456665432222 599999999 77
Q ss_pred cccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeeccccc---ccccccccCCCccchhHHHHHHHHHHH
Q 001531 359 FGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTRE---QHIRRDKATSNICTAQALLANMAAMYA 435 (1058)
Q Consensus 359 lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtre---q~irRekaTsni~t~~~l~a~~Aa~yl 435 (1058)
|+.| ||++|++++++.+.++..+- ...| -+. .+.++... .+.+ ..-|.|......++++..++
T Consensus 187 L~~p-----pGls~v~vs~~Al~~~~~~~--~y~~---~~~-~~~~~~~~~~~~~~~-~~~t~~TP~v~~l~a~~~~l-- 252 (374)
T TIGR01365 187 LGGE-----GAHGMLILSPRAVARLESYT--PAWP---LPK-IFRLTKGGKLNKKIF-EGSTINTPSMLCVEDWLDAL-- 252 (374)
T ss_pred cCCC-----CceEEEEECHHHHHHHhhcC--CCCC---Chh-hhccccccchhhhhh-cCCCCCChHHHHHHHHHHHH--
Confidence 8766 78999999998876643110 0000 000 12211100 0111 12355654445555554444
Q ss_pred HHhCcc-cHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC---CCccEE-EEec--C-------C-----HHHHHHHHHHcC
Q 001531 436 VYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQGL---PFFDTV-KVKC--A-------D-----AHAIASAAYKIE 496 (1058)
Q Consensus 436 ~~~g~~-Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~---~~~~~v-~i~~--~-------~-----~~~l~~~L~~~G 496 (1058)
.++..+ |++++.+|+.++++.++++++++|.++++.. ...+++ ++.. + + +.++.+.|.++|
T Consensus 253 ~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 332 (374)
T TIGR01365 253 KWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEG 332 (374)
T ss_pred HHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCC
Confidence 455554 8999999999999999999999974566532 123332 2333 2 1 467899999999
Q ss_pred ceeee----ccCCeEEEEeccCCCHHHHHHHHHHHh
Q 001531 497 MNLRV----VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 497 I~~~~----~~~~~lris~~~~~t~edid~ll~al~ 528 (1058)
|.+.. ..+..+||.-.-..+.+|++.+++.|.
T Consensus 333 i~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~ 368 (374)
T TIGR01365 333 VAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLD 368 (374)
T ss_pred EEEeccccccCCCceEEecCCcCCHHHHHHHHHHHH
Confidence 97642 224789999999999999999999874
No 349
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.59 E-value=7.6e-14 Score=160.53 Aligned_cols=296 Identities=10% Similarity=0.038 Sum_probs=181.6
Q ss_pred HHHHHHHHHHHHHHhCCCc---eeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCC-CCCcc-HHHHHhCCcEEE
Q 001531 631 QEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVS-AHGTN-PATAAMCGMKIV 705 (1058)
Q Consensus 631 ~~~~~el~~~lael~G~~~---~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~s-aHg~~-pa~a~~~G~~vv 705 (1058)
.+++.++++.+++++|.+. +.+..+||+.|.++++..+. .+++++++... .+|.. ...++..|+ ++
T Consensus 36 ~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~--------~~~~~~l~i~~G~fg~r~~~~a~~~g~-~~ 106 (349)
T TIGR01364 36 EAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLL--------AEGKVADYIVTGAWSKKAAKEAKKYGV-VN 106 (349)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcC--------CCCCeEEEEECCHHHHHHHHHHHHhCC-cE
Confidence 4678899999999999742 34666778777766555432 13455554332 22211 123667898 77
Q ss_pred EEcCCCCC----CCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCC
Q 001531 706 SVGTDAKG----NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 780 (1058)
Q Consensus 706 ~V~~d~~g----~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg 780 (1058)
.+..++.+ .+|+++++ ++ +++..|.+++- +.+|+.. + ++++.+|++++||+++..+...+ ...
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~--~~---~~~~~v~~th~ETstGv~~-~-----~l~~~~~~l~iVDavss~g~~~i-d~~ 174 (349)
T TIGR01364 107 VVASGKEGNYTKIPDPSTWE--IS---EDAAYVHYCANETIHGVEF-R-----ELPDVKNAPLVADMSSNILSRPI-DVS 174 (349)
T ss_pred EEeccccCCCCCCCCHHhcC--CC---CCCCEEEEcCCCCcccEec-c-----eecccCCCeEEEEccccccCccC-CHH
Confidence 77765332 45666655 22 57788888875 5689976 3 66777899999999875332211 112
Q ss_pred ccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCC---CCCCCCCCCCCCccchhhHHHHHHHH
Q 001531 781 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIP---APEKSQPLGTIAAAPWGSALILPISY 857 (1058)
Q Consensus 781 ~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g---~~~~~~~t~~i~sa~~g~~~~~~~a~ 857 (1058)
+ .|+++++.||+|+ | ||+|++++++++.+.+...... ..++. .......|+++. .+.+..
T Consensus 175 ~--~d~~~~ssqK~lg-P-----~Glg~l~~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Tp~~~--------~i~al~ 237 (349)
T TIGR01364 175 K--FGLIYAGAQKNIG-P-----AGLTVVIVRKDLLGRASRITPS-MLNYKIHAENDSMYNTPPTF--------AIYVSG 237 (349)
T ss_pred H--ccEEEEecccccC-C-----CceEEEEECHHHHhhcccCCCC-cchHHHHHhcCCCCCCCcHH--------HHHHHH
Confidence 2 4699999999874 3 6899999998776555322111 11110 000001122221 122234
Q ss_pred HHHHHHchh-hHHHHHHHHHHHHHHHHHHHhccCCe--eeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccc
Q 001531 858 TYIAMMGSK-GLTEASKIAILNANYMAKRLEKHYPI--LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 934 (1058)
Q Consensus 858 a~l~~lG~e-Gl~~~a~~~~~~a~yL~~~L~~~~~v--~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~ 934 (1058)
+.+.++-++ |+.++.++...+++++.++|+++-.+ ....+..+....+.|.++.. +. ..++.+.+.++|+.+
T Consensus 238 ~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~----~~-~~~~~~~~~~~Gi~~ 312 (349)
T TIGR01364 238 LVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNE----EL-EKRFLKEAEERGLVS 312 (349)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCCh----hH-hHHHHHHHHHCCCcc
Confidence 456666677 69999999999999999999986223 11111111111233443310 11 256667888899965
Q ss_pred cCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001531 935 PTMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1058)
Q Consensus 935 ~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~ 970 (1058)
..... ..+++|+|+...+|++|||+|+++|+++.+
T Consensus 313 ~~~~~-~~g~vRvS~~~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 313 LKGHR-SVGGMRASIYNAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred cCCcc-ccCeeEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 43321 247999999999999999999999998754
No 350
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.59 E-value=9.9e-14 Score=161.46 Aligned_cols=281 Identities=17% Similarity=0.188 Sum_probs=181.8
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHH----HHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~----a~~~G~~vv~V~~ 709 (1058)
..++++.++++.|.+.+ +..++|..+.. .+ +. .. +++++||++...|+.+... +...|++++.++.
T Consensus 49 ~~~le~~la~l~g~~~~-l~~~sG~~al~-~~--l~-ll-----~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~ 118 (378)
T TIGR01329 49 RTALESLLAKLDKADRA-FAFSSGMAALD-VI--TR-LL-----NNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDT 118 (378)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHH-HH--HH-Hh-----CCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCC
Confidence 56889999999999754 44566765442 22 22 11 2568899988766654332 4568999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
.|+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++.. +....|.++|+|+++
T Consensus 119 -----~d~~~le~~i~---~~tklv~le~psnptg~v~-dl~~I~~la~~~g~~vivD~a~~~--~~~~~~l~~g~Di~v 187 (378)
T TIGR01329 119 -----TDLDKVKAALG---PKTKLVLLESPTNPLQKIV-DIRKISEMAHAQNALVVVDNTMMS--PLLCNPLELGADIVY 187 (378)
T ss_pred -----CCHHHHHHhcC---cCceEEEEECCCCCCCeee-cHHHHHHHHHHcCCEEEEECCCcc--cccCChhhcCCcEEE
Confidence 38999999996 78999999999 4689887 899999999999999999998642 223567778999999
Q ss_pred eCCccccccCCCCCCCceeEEEEeC-CCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001531 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~G~i~~~~-~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1058)
+++||+++.| ++..+|++++++ .+.+.+... + ...+. +.++ . -+++...|.+-
T Consensus 188 ~S~tK~l~G~---~~~~~G~v~~~~~~~~~~~~~~------------~-~~~G~-~~~~----~-----~a~l~~~~l~t 241 (378)
T TIGR01329 188 HSATKFLAGH---SDVMAGVLAVKGEEIAKKVYFL------------Q-NSTGS-GLAP----F-----DCWLLLRGIKT 241 (378)
T ss_pred EecceeccCC---ccceeEEEEeCcHHHHHHHHHH------------H-HhcCC-cCCH----H-----HHHHHHccCCC
Confidence 9999998522 122378888865 332222100 0 00011 1111 1 12344556667
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC---CeeeccCCCc------------cceEEEEecccccccCCCC-HHHHHHHHHHCC
Q 001531 868 LTEASKIAILNANYMAKRLEKHY---PILFRGVNGT------------VAHEFIVDLRGLKNTAGIE-PEDVAKRLMDYG 931 (1058)
Q Consensus 868 l~~~a~~~~~~a~yL~~~L~~~~---~v~~~g~~~~------------~~~e~vv~~~~~~~~~g~~-~~~v~k~L~~~G 931 (1058)
+..+.++...|+..+++.|+++. .+.|++-++. +...+.|++. +.+ +.++.+.|...+
T Consensus 242 l~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~------~~~~~~~~~~~L~~~~ 315 (378)
T TIGR01329 242 LAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETG------SVALSKRLVEATKLFS 315 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEEC------CHHHHHHHHHhCcCcc
Confidence 77778888899999999998752 3445442110 1112333332 223 568888886555
Q ss_pred cccc--C----CCCC-----------------C-CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 932 FHGP--T----MSWP-----------------V-PGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 932 i~~~--~----~~~p-----------------~-~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
+.++ . +..| + ++.+|+|+.. |++|.++++|.++++.
T Consensus 316 i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 316 ITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGI----EDVDDLISDLDIAFVT 375 (378)
T ss_pred cccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHh
Confidence 4331 1 1011 1 3689999864 5677777777777654
No 351
>PLN00144 acetylornithine transaminase
Probab=99.59 E-value=5.6e-13 Score=155.42 Aligned_cols=317 Identities=17% Similarity=0.246 Sum_probs=197.3
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY 671 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y 671 (1058)
..+|++.+++..++..+. ....+.. ..+. .+...++.+.|+++++.+. .++.++|++++++++..+|.|
T Consensus 27 ~~lGh~~p~v~~ai~~q~-~~~~~~~-~~~~--------~~~~~~la~~l~~~~~~~~-v~f~~sGseA~e~AlklAr~~ 95 (382)
T PLN00144 27 NALGHGDPDWVKAVAEQA-GTLAHVS-NVYH--------TIPQVELAKRLVASSFADR-VFFCNSGTEANEAAIKFARKY 95 (382)
T ss_pred ccCCCCCHHHHHHHHHHH-HhcCCcc-cccc--------CHHHHHHHHHHHhcCCCCe-EEEeCCcHHHHHHHHHHHHHH
Confidence 357888777766666552 2111111 0111 1224478888888887664 467889999999999988888
Q ss_pred HHHcCCCC-------CCEEE-EcCCCCCccHHHHHhCCc------------EEEEEcCCCCCCCCHHHHHHHHHhcCCCe
Q 001531 672 HKARGDHH-------RNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAKGNINIEELRKAAEANRDNL 731 (1058)
Q Consensus 672 ~~~~G~~~-------r~~Vl-ip~saHg~~pa~a~~~G~------------~vv~V~~d~~g~iD~e~L~~~i~~~~~~t 731 (1058)
...+|..+ |.+|| +..++||....+....+- .++.+|. .|+++|++.+. .+++
T Consensus 96 ~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~--~~~~ 168 (382)
T PLN00144 96 QRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEY-----GNLEAARKLIQ--KGKT 168 (382)
T ss_pred HhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCC-----CCHHHHHHhcC--CCCe
Confidence 65433211 34555 567899987666543221 1334443 37899999885 3577
Q ss_pred EEEEEEcC-CCccccc-cc--HHHHHHHHHHcCCEEEEeccCcccccCcCCCCc--------cCCcEEEeCCccccccCC
Q 001531 732 STLMVTYP-STHGVYE-EG--IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPH 799 (1058)
Q Consensus 732 aaV~vt~P-n~~G~i~-~d--I~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~--------~GaDi~~~s~hKtf~~P~ 799 (1058)
++|+++.- +..|++. +. +++|.++|++||+++|+|+++. ++.+.|. .-+|++++ .|.++
T Consensus 169 aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~t----g~gr~g~~~~~~~~~~~PDi~t~--sK~l~--- 239 (382)
T PLN00144 169 AAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQC----GLGRTGYLWAHEAYGVEPDIMTL--AKPLA--- 239 (382)
T ss_pred EEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh----CCCccchHhhhhhcCCCCCEEEe--ccccc---
Confidence 77776632 3434543 24 8999999999999999999853 3433331 23676665 58774
Q ss_pred CCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHH
Q 001531 800 GGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNA 879 (1058)
Q Consensus 800 g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a 879 (1058)
||-.+|++++++++.+.+.... ..+++.++++.++++.+.|..+-.+++.+.. ....
T Consensus 240 --~G~pig~v~~~~~~~~~~~~~~------------------~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~---~~~g 296 (382)
T PLN00144 240 --GGLPIGAVLVTEKVASAINPGD------------------HGSTFAGGPLVCNAALAVLDKISKPGFLASV---AKKG 296 (382)
T ss_pred --CCcceEEEEEcHHHHhccCCCC------------------CCCCCCCCHHHHHHHHHHHHHHhhchHHHHH---HHHH
Confidence 3456899999888776542110 0011234566666777777777555554433 3444
Q ss_pred HHHHHHHhcc---CCee--eccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCC
Q 001531 880 NYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESES 954 (1058)
Q Consensus 880 ~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t 954 (1058)
+++.+.|++. ++.. +.| .|.+ +.+.+. .+...+.+++.++|+.+..... .+.||++|+...+
T Consensus 297 ~~l~~~l~~~~~~~~~~~~vrg-~G~~---~~l~l~-------~~~~~~~~~~~~~Gv~i~~~~~--~~~lrl~p~~~~~ 363 (382)
T PLN00144 297 EYLRELLRRKLGGNPHVKEVRG-VGLL---VGIQLD-------VPAGPLVDACRDSGLLVLTAGK--GDVVRLVPPLVIS 363 (382)
T ss_pred HHHHHHHHHHHhhCCCceeeec-CceE---EEEEec-------CccHHHHHHHHHCCeEEeecCC--CCEEEEeCCCccC
Confidence 5555655542 2221 223 2322 334332 2346899999999998753321 4789999999889
Q ss_pred HHHHHHHHHHHHHHHHH
Q 001531 955 KEELDRYCDALISIREE 971 (1058)
Q Consensus 955 ~eeid~fi~aL~~i~~e 971 (1058)
++||+.+++.|.+++.+
T Consensus 364 ~~~i~~~~~~l~~~l~~ 380 (382)
T PLN00144 364 EAELEQAVEILADCLPA 380 (382)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999988754
No 352
>PRK12403 putative aminotransferase; Provisional
Probab=99.59 E-value=8.2e-13 Score=157.35 Aligned_cols=340 Identities=17% Similarity=0.184 Sum_probs=200.7
Q ss_pred cccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCC-ceeeecCchHHHHHHHHHHHHHH
Q 001531 593 PLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAY 671 (1058)
Q Consensus 593 ~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~-~~~l~~~sGa~ge~a~llair~y 671 (1058)
.||++.+++..+...+. ..-.+.+ .+ ..+..+...++.++|+++++.+ ...++.++|++++++++.++|.|
T Consensus 67 ~lGh~hp~v~~A~~~q~-~~~~~~~--~~-----~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~~ 138 (460)
T PRK12403 67 NLGYGRKDLAAAAARQM-EQLPYYN--MF-----FHTTHPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRY 138 (460)
T ss_pred cCCCCCHHHHHHHHHHH-HhCCCee--cc-----cccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHH
Confidence 57888777666666552 2211111 11 0112234568889999998733 23467889999999999999988
Q ss_pred HHHcCCCCCCEEEE-cCCCCCccHHHHHhCCcE-----------EEEEcCCCC------------CCCCHHHHHHHHHh-
Q 001531 672 HKARGDHHRNVCII-PVSAHGTNPATAAMCGMK-----------IVSVGTDAK------------GNINIEELRKAAEA- 726 (1058)
Q Consensus 672 ~~~~G~~~r~~Vli-p~saHg~~pa~a~~~G~~-----------vv~V~~d~~------------g~iD~e~L~~~i~~- 726 (1058)
...+|..++.+|+. ..++||..-......|.+ +..+|.... +..++++|++.+.+
T Consensus 139 ~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~ 218 (460)
T PRK12403 139 WQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILEL 218 (460)
T ss_pred HHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHh
Confidence 65555333444443 467899765554433322 334432110 00124567666642
Q ss_pred cCCCeEEEEEEcC-CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc------C--CcEEEeCCccc
Q 001531 727 NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNLHKT 794 (1058)
Q Consensus 727 ~~~~taaV~vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~------G--aDi~~~s~hKt 794 (1058)
..+++++|+++.- +..|++.+ .+++|.++|++||+++|+|+++ +|+.+.|.+ | +||+++ .|.
T Consensus 219 ~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~----tGfGRtG~~~a~e~~gv~PDiv~~--gK~ 292 (460)
T PRK12403 219 GAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVI----GGFGRTGEWFAHEHFGFEPDTLSI--AKG 292 (460)
T ss_pred CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc----cCCCcCchhhhhhhcCCCCCeEEE--ccc
Confidence 3467888887653 45577653 2999999999999999999984 566666643 2 588875 476
Q ss_pred cccCCCCCC-CceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHH
Q 001531 795 FCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASK 873 (1058)
Q Consensus 795 f~~P~g~GG-Pg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~ 873 (1058)
++ +|- |- |.+++++++.+.+...- + . ....+++.|+++.++++.+.|..+-++++.+.++
T Consensus 293 lg----gG~~Pi-ga~v~~~~i~~~~~~~~-----------~--~-~~~~~T~~gnPl~~Aaala~L~~i~~~~l~~~~~ 353 (460)
T PRK12403 293 LT----SGYVPM-GGLVLSKRIAEALVEQG-----------G--V-FAHGLTYSGHPVAAAVAIANLKALRDEGVVTRVK 353 (460)
T ss_pred cc----ccccce-EEEEECHHHHHHHhcCC-----------C--c-cccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHH
Confidence 63 332 54 44556766655442100 0 0 0011124467788888888898887766543321
Q ss_pred HHHHHHHHHHHHHhcc---CCee--eccCCCccceEEEEecccccccCCCC----HHHHHHHHHHCCccccCCCCCCCCE
Q 001531 874 IAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIE----PEDVAKRLMDYGFHGPTMSWPVPGT 944 (1058)
Q Consensus 874 ~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~~~~~~g~~----~~~v~k~L~~~Gi~~~~~~~p~~~~ 944 (1058)
..+.++|+++|++. ++++ +.|. | .+.-+-+..+.-....... ...+.+.+.++|+.+... .+.
T Consensus 354 --~~~g~~l~~~L~~l~~~~~~i~~vrG~-G-l~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----~~~ 425 (460)
T PRK12403 354 --DDTGPYLQRCLREVFGDHPLVGEVQGA-G-LVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRST----LGR 425 (460)
T ss_pred --HHHHHHHHHHHHHHHhcCCCEEeEeec-c-eEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEec----CCE
Confidence 14567788877653 3322 2231 3 2221212111000000001 233556668899987522 357
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001531 945 LMIEPTESESKEELDRYCDALISIREEIA 973 (1058)
Q Consensus 945 Lris~te~~t~eeid~fi~aL~~i~~e~~ 973 (1058)
++++|....|++|||+++++|.+++.++.
T Consensus 426 ~~l~Ppl~it~~eid~~~~~l~~al~~~~ 454 (460)
T PRK12403 426 MIMAPALVAGRAEIDELVDKTRIAVDRTA 454 (460)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998874
No 353
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.59 E-value=2.4e-13 Score=157.17 Aligned_cols=237 Identities=18% Similarity=0.105 Sum_probs=157.6
Q ss_pred HHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE-eCchhh
Q 001531 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV-SDLKDI 291 (1058)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~-v~~~~l 291 (1058)
..++++.+|++.|.+. +.++.+|++++.+++..+ ++||+||++...+......+.......++++.+ .+++++
T Consensus 56 ~~~le~~lA~leg~~~--~v~~~sG~aAi~~~l~~l----~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~~~d~~~l 129 (364)
T PRK07269 56 RAKLEETLAAIESADY--ALATSSGMSAIVLAFSVF----PVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTYANTEEEL 129 (364)
T ss_pred HHHHHHHHHHHhCCCe--EEEeCCHHHHHHHHHHHh----CCCCEEEEecCCcCchHHHHHHHHhcCcEEEEecCCHHHH
Confidence 3457789999999764 888999998888766433 389999999988876665554433334666554 346778
Q ss_pred hc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCCCC
Q 001531 292 DY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGP 368 (1058)
Q Consensus 292 ~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~GGP 368 (1058)
++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|| +.++.+....|-++|+||+++|+ |.++++ |.-
T Consensus 130 ~~~i~~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD-~t~~~~~~~~pl~~gaDivv~S~tK~l~g~---~d~ 205 (364)
T PRK07269 130 IAAIEEDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVD-NTFYSPIYQRPIELGADIVLHSATKYLSGH---NDV 205 (364)
T ss_pred HHhcCcCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCcEEEecCceeccCC---Ccc
Confidence 77 8889999999998 67999999999999999999999994 45555555667789999999998 878643 211
Q ss_pred ceEEEEEeh-hhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHH
Q 001531 369 HAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIA 447 (1058)
Q Consensus 369 ~~G~l~~~~-~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia 447 (1058)
-+|++++++ ++.+++- ..|...| .| .++ ..| |+...+-+-|..+.
T Consensus 206 ~gG~v~~~~~~l~~~~~-------------------------~~~~~~G---~~-~s~---~~a--~l~~~~L~tL~~r~ 251 (364)
T PRK07269 206 LAGVVVTNDLELYEKLF-------------------------YNLNTTG---AV-LSP---FDS--YLLMRGLKTLSLRM 251 (364)
T ss_pred cceEEEeCcHHHHHHHH-------------------------HHHHHhC---CC-CCH---HHH--HHHHcCCCcHHHHH
Confidence 246666653 4433320 0000111 11 011 122 23455556677777
Q ss_pred HHHHHHHHHHHHHHhcCCCeE-EcCCCCccEEEEecCC---HHHHHHHHH
Q 001531 448 QRVHGLAGTFALGLKKLGTVE-VQGLPFFDTVKVKCAD---AHAIASAAY 493 (1058)
Q Consensus 448 ~~~~~~a~~l~~~L~~~G~~~-l~~~~~~~~v~i~~~~---~~~l~~~L~ 493 (1058)
++..+++.++++.|++.+++. ++-++.-..|+|...+ +..+.+.|.
T Consensus 252 ~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~~~~~~~~f~~~l~ 301 (364)
T PRK07269 252 ERSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFKVADETRIPHILNSLK 301 (364)
T ss_pred HHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEEECCHHHHHHHHHhCC
Confidence 888899999999999875443 3323333345555444 334444443
No 354
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.59 E-value=2.2e-13 Score=158.49 Aligned_cols=212 Identities=17% Similarity=0.204 Sum_probs=149.7
Q ss_pred HHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---h
Q 001531 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 289 (1058)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~---~ 289 (1058)
..++++.+|++.|.+. +.++.+|++++.+++. + . ++||+||++...|+++...+...++..|++++.++. +
T Consensus 52 ~~~Le~~lA~l~g~~~--~~~~~sG~aai~~~~~-~-l--~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~ 125 (377)
T PRK07671 52 RAALEELIAVLEGGHA--GFAFGSGMAAITAVMM-L-F--SSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTSNLE 125 (377)
T ss_pred HHHHHHHHHHHhCCCc--eEEeCCHHHHHHHHHH-H-h--CCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCCCHH
Confidence 4567789999999876 5678888887765543 2 2 379999999999998887776666778999999875 4
Q ss_pred hhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCC
Q 001531 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1058)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1058)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|| +..+.+....|.++|+||+++|. |.|++|-+
T Consensus 126 ~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD-~a~~~~~~~~p~~~g~Divv~S~sK~l~G~~~-- 202 (377)
T PRK07671 126 EVEEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVD-NTFMTPYWQSPISLGADIVLHSATKYLGGHSD-- 202 (377)
T ss_pred HHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEE-CCCCccccCChhhhCCeEEEecCcccccCCcc--
Confidence 5555 7889999999998 68999999999999999999999994 45555555567789999999998 87765421
Q ss_pred CCceEEEEEeh-hhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHH
Q 001531 367 GPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1058)
Q Consensus 367 GP~~G~l~~~~-~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ 445 (1058)
-.+|++.+++ ++.+++. ..|..-+ .. ..+ .. .|+...+.+-+..
T Consensus 203 -~~~G~~v~~~~~l~~~~~-------------------------~~~~~~g--~~--~~~---~~--a~l~~~~l~tl~~ 247 (377)
T PRK07671 203 -VVAGLVVVNSPELAEDLH-------------------------FVQNSTG--GI--LGP---QD--SWLLLRGLKTLGI 247 (377)
T ss_pred -ceeEEEEeCcHHHHHHHH-------------------------HHHHhhc--CC--CCH---HH--HHHHHcCcChHHH
Confidence 1246666643 4433320 0000000 00 011 11 1234445555666
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeE
Q 001531 446 IAQRVHGLAGTFALGLKKLGTVE 468 (1058)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~G~~~ 468 (1058)
..++..+++..|.+.|++..++.
T Consensus 248 R~~~~~~na~~la~~L~~~~~v~ 270 (377)
T PRK07671 248 RMEEHETNSRAIAEFLNNHPAVN 270 (377)
T ss_pred HHHHHHHHHHHHHHHHHcCCCee
Confidence 77778899999999999875453
No 355
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.59 E-value=8.9e-14 Score=161.29 Aligned_cols=217 Identities=14% Similarity=0.109 Sum_probs=153.1
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHH----HHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~----a~~~G~~vv~V~~ 709 (1058)
...+++.+++|-|.+.+.+ ..||..|..++++++. +++++||++...|+..... +...|+++.+++.
T Consensus 64 ~~~le~~la~LEg~~~a~~-~~SGmaAi~~~~~~ll--------~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~ 134 (395)
T PRK08114 64 HFSLQEAMCELEGGAGCAL-YPCGAAAVANAILAFV--------EQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP 134 (395)
T ss_pred HHHHHHHHHHHhCCCeEEE-EhHHHHHHHHHHHHHc--------CCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC
Confidence 3468899999999876644 4457666644444331 2568899987776544433 3558999999875
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcC--CEEEEeccCcccccCcCCCCccCCcE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNG--GQVYMDGANMNAQVGLTSPGYIGADV 786 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g--~lv~vD~a~~~al~gl~~pg~~GaDi 786 (1058)
.|.++++++++ ++|++|+++.| |.+|.+. ||++|+++||++| ++++||+++.. +.+.+|.++|+|+
T Consensus 135 -----~d~~~l~~~l~---~~TrlV~~EtpsNp~~~v~-DI~~Ia~ia~~~g~g~~lvVDnT~a~--p~~~~pl~~GaDi 203 (395)
T PRK08114 135 -----LIGADIAKLIQ---PNTKVVFLESPGSITMEVH-DVPAIVAAVRSVNPDAVIMIDNTWAA--GVLFKALDFGIDI 203 (395)
T ss_pred -----CCHHHHHHhcC---CCceEEEEECCCCCCCEee-cHHHHHHHHHHhCCCCEEEEECCCcc--ccccCHHHcCCcE
Confidence 57899999997 78999999999 5788887 8999999999985 99999988653 3457899999999
Q ss_pred EEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001531 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1058)
Q Consensus 787 ~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1058)
++.++||+++.+ +.-++|+++.++++...+-. ..+..+...+ ++ -+|+...|-+
T Consensus 204 vv~S~tKyl~Gh---sdv~~G~v~~~~~~~~~l~~-------------~~~~~G~~~~-p~---------~a~l~~rgl~ 257 (395)
T PRK08114 204 SIQAGTKYLVGH---SDAMIGTAVANARCWEQLRE-------------NSYLMGQMVD-AD---------TAYMTSRGLR 257 (395)
T ss_pred EEEcCcccccCC---CcceeEEEEcCHHHHHHHHH-------------HHHhccCCCC-HH---------HHHHHHcCCC
Confidence 999999999522 11267877766543221100 0011122221 11 2445666777
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccC---Ceeecc
Q 001531 867 GLTEASKIAILNANYMAKRLEKHY---PILFRG 896 (1058)
Q Consensus 867 Gl~~~a~~~~~~a~yL~~~L~~~~---~v~~~g 896 (1058)
-+.-+.++..+||..+++.|+++. .|.|+|
T Consensus 258 TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPg 290 (395)
T PRK08114 258 TLGVRLRQHEESSLKVAEWLAEHPEVARVNHPA 290 (395)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCC
Confidence 777788889999999999999863 355665
No 356
>PRK07505 hypothetical protein; Provisional
Probab=99.59 E-value=2.5e-13 Score=159.68 Aligned_cols=291 Identities=17% Similarity=0.194 Sum_probs=168.6
Q ss_pred HHHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHH--HhCCcEEEEEc
Q 001531 631 QEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA--AMCGMKIVSVG 708 (1058)
Q Consensus 631 ~~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a--~~~G~~vv~V~ 708 (1058)
.+...++++.+++++|. . .+..++|+.++++++..++.+. ..+ ++++.|+...+.|++..... ...+.+++.+|
T Consensus 90 ~~~~~~l~~~la~~~~~-~-~~~~~sG~~a~~~ai~~~~~~~-~~~-~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~ 165 (402)
T PRK07505 90 SQILKDLEEALSELFGA-S-VLTFTSCSAAHLGILPLLASGH-LTG-GVPPHMVFDKNAHASLNILKGICADETEVETID 165 (402)
T ss_pred hHHHHHHHHHHHHHhCC-C-EEEECChHHHHHHHHHHHHhcc-cCC-CCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeC
Confidence 45677899999999998 3 3555577776655554433211 111 12334445557787643221 22456888888
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCC------c
Q 001531 709 TDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG------Y 781 (1058)
Q Consensus 709 ~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg------~ 781 (1058)
. .|+++|+++++ +++.++++++|+ .+|.+. ++++|.++|+++|+++++|+++.. +++.+.| .
T Consensus 166 ~-----~d~~~l~~~~~---~~~~~~vl~~p~~~~G~~~-~~~~i~~l~~~~~~~li~DEa~~~--~~~g~~g~~~~~~~ 234 (402)
T PRK07505 166 H-----NDLDALEDICK---TNKTVAYVADGVYSMGGIA-PVKELLRLQEKYGLFLYIDDAHGL--SIYGKNGEGYVRSE 234 (402)
T ss_pred C-----CCHHHHHHHHh---cCCCEEEEEecccccCCcC-CHHHHHHHHHHcCCEEEEECcccc--cCcCCCCCchHHHH
Confidence 6 58999999986 556778888884 578777 699999999999999999999632 2221111 1
Q ss_pred cC---Cc--EEEeCCccccccCCCCCCCceeEEEE-eCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHH
Q 001531 782 IG---AD--VCHLNLHKTFCIPHGGGGPGMGPIGV-KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 855 (1058)
Q Consensus 782 ~G---aD--i~~~s~hKtf~~P~g~GGPg~G~i~~-~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~ 855 (1058)
++ .| +++.++.|.|+. +| |++.+ ++++.+.+.... .....++++ +...+++
T Consensus 235 ~~~~~~d~~i~~~s~sK~~~~------~G-g~~~~~~~~~~~~~~~~~--------------~~~t~~~~~--~~~a~aa 291 (402)
T PRK07505 235 LDYRLNERTIIAASLGKAFGA------SG-GVIMLGDAEQIELILRYA--------------GPLAFSQSL--NVAALGA 291 (402)
T ss_pred cCCCCCCCeEEEEechhhhhc------cC-eEEEeCCHHHHHHHHHhC--------------CCceeCCCC--CHHHHHH
Confidence 22 24 445577787742 22 66654 444443321100 000011110 1122333
Q ss_pred HHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCcccc
Q 001531 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 935 (1058)
Q Consensus 856 a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~ 935 (1058)
+.+.+..+..+.+.+..++..++.+++...+.. . ..+ .......+.+. ......++.++|.++||.+.
T Consensus 292 ~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~--~~g---~~~~i~~~~~~-----~~~~~~~~~~~l~~~Gi~v~ 359 (402)
T PRK07505 292 ILASAEIHLSEELDQLQQKLQNNIALFDSLIPT--E--QSG---SFLPIRLIYIG-----DEDTAIKAAKQLLDRGFYTS 359 (402)
T ss_pred HHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHh--c--CCC---CCCCEEEEEeC-----CHHHHHHHHHHHHHCCCeEe
Confidence 444455455565555444433333333222211 1 112 12111122221 01135789999999999986
Q ss_pred CCCCC-CC---CEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 936 TMSWP-VP---GTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 936 ~~~~p-~~---~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
...+| ++ +.|||+|+..+|++|+|+++++|++++.+
T Consensus 360 ~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 360 PVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred eecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 55555 22 58999999999999999999999987643
No 357
>PRK07046 aminotransferase; Validated
Probab=99.58 E-value=1.7e-13 Score=162.59 Aligned_cols=329 Identities=16% Similarity=0.135 Sum_probs=198.1
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY 671 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y 671 (1058)
..||++.+++..++..+. ....+..+ + .+...++.+.++++++++.+ .+.+||+++.++++..+|+|
T Consensus 87 ~~lGh~~p~i~~Av~~q~-~~~~~~~~-~----------~~~~~~lAe~l~~~~~~~~v-~F~nSGtEA~e~AlrlAR~~ 153 (453)
T PRK07046 87 AMFGHSPAPVARALAEQA-RRGLTTML-P----------SEDAAWVGEELARRFGLPYW-QVATTATDANRFVLRWARAV 153 (453)
T ss_pred cccCCCCHHHHHHHHHHH-HhCCCCCC-C----------CHHHHHHHHHHHHHhCCCEE-EEECCHHHHHHHHHHHHHHh
Confidence 457888877776666652 22111111 1 12345788899999887654 56789998888777777776
Q ss_pred HHHcCCCCCCEEE-EcCCCCCccHHHHHh------------CCc------EEEEEcCCCCCCCCHHHHHHHHHhcCCCeE
Q 001531 672 HKARGDHHRNVCI-IPVSAHGTNPATAAM------------CGM------KIVSVGTDAKGNINIEELRKAAEANRDNLS 732 (1058)
Q Consensus 672 ~~~~G~~~r~~Vl-ip~saHg~~pa~a~~------------~G~------~vv~V~~d~~g~iD~e~L~~~i~~~~~~ta 732 (1058)
++|++|+ +..++||.+...... .|+ .+..+|+ .|++++++.+. .++++
T Consensus 154 ------TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----nd~~~l~~~l~--~~~vA 220 (453)
T PRK07046 154 ------TGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-----NDLAALEAALA--DGDVA 220 (453)
T ss_pred ------hCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-----CCHHHHHHHhC--CCCeE
Confidence 2356666 467899976443211 111 1223333 38999999995 36888
Q ss_pred EEEEEcC-CCcccccc---cHHHHHHHHHHcCCEEEEeccCc--ccccCcCCCCccCCcEEEeCCccccccCCCCCCCce
Q 001531 733 TLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANM--NAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGM 806 (1058)
Q Consensus 733 aV~vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~--~al~gl~~pg~~GaDi~~~s~hKtf~~P~g~GGPg~ 806 (1058)
+|+++.- ...|.+.+ .++++.++|+++|+++|+|+++. .++++...--..-+|++++ .|.+ ++|-| +
T Consensus 221 avi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~~~~gv~PDi~t~--gK~l----ggG~P-i 293 (453)
T PRK07046 221 AVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYTRAHGLEPDFLVV--GKPI----AGGVP-C 293 (453)
T ss_pred EEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchhHHhCCCccceee--hhhh----cCCCc-c
Confidence 8888753 34566653 38999999999999999999975 2344431101123788875 4766 45545 7
Q ss_pred eEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHH
Q 001531 807 GPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRL 886 (1058)
Q Consensus 807 G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L 886 (1058)
|.+++++++++.+.... . ..........+++.|+++.++++.+.|..+-.+++ .++.....++|+++|
T Consensus 294 ~av~g~~~i~~~~~~~~--~-------~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~---~~~~~~~g~~l~~~L 361 (453)
T PRK07046 294 AVYGFSAELAERAQAAK--A-------SAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAA---YAHMLALAARLAAGL 361 (453)
T ss_pred eeeeehHHHHHHHhhcc--c-------cCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccH---HHHHHHHHHHHHHHH
Confidence 88888877665431100 0 00000011222355778888888888888865553 334445677888888
Q ss_pred hcc---CC--eeeccCCCccceEEEEeccccccc----CCCC---HHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCC
Q 001531 887 EKH---YP--ILFRGVNGTVAHEFIVDLRGLKNT----AGIE---PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESES 954 (1058)
Q Consensus 887 ~~~---~~--v~~~g~~~~~~~e~vv~~~~~~~~----~g~~---~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t 954 (1058)
+++ +. ..+.|. |.. ..+.++-...... ...+ ...+...|.++|++... ..+.++++|+ +|
T Consensus 362 ~~l~~~~~~~~~v~g~-G~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~----~~~~~~~~p~--~t 433 (453)
T PRK07046 362 RAVIARHGLPWHVTRV-GAR-VEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLITP----FHNMMLVCPA--TT 433 (453)
T ss_pred HHHHHhCCCCeEEEEe-CcE-EEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEec----ccCcEEEeCC--CC
Confidence 753 22 223332 322 2233321110000 0001 24567778899998642 2356788875 89
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 001531 955 KEELDRYCDALISIREEIA 973 (1058)
Q Consensus 955 ~eeid~fi~aL~~i~~e~~ 973 (1058)
++|||++++++.+++.++.
T Consensus 434 ~~did~~~~~~~~~l~~~~ 452 (453)
T PRK07046 434 AADVDRLVAAFDACLGELL 452 (453)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999887653
No 358
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.58 E-value=3.3e-13 Score=158.22 Aligned_cols=257 Identities=19% Similarity=0.196 Sum_probs=160.1
Q ss_pred CCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCC-CC-C-CCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc--ccHHHH
Q 001531 679 HRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KG-N-INIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEI 752 (1058)
Q Consensus 679 ~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~-~g-~-iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~--~dI~eI 752 (1058)
++++|+++++.+..+...++..|++++.++.+. +| . .|+++|+++++ +++++|++++|+ .+|.+- +++++|
T Consensus 111 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~---~~~~~v~i~~p~NPtG~~~~~~~~~~i 187 (397)
T PRK07568 111 PGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLIT---PKTKAILISNPGNPTGVVYTKEELEML 187 (397)
T ss_pred CCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcC---ccceEEEEECCCCCCCccCCHHHHHHH
Confidence 567899988776666666788999999999863 34 2 36899999886 688999999995 789875 258999
Q ss_pred HHHHHHcCCEEEEeccCccc-ccC--cCCCCcc-C-Cc--EEEeCCccccccCCCCCCCceeEEEEe-CCCCCCCCCCCc
Q 001531 753 CKIIHDNGGQVYMDGANMNA-QVG--LTSPGYI-G-AD--VCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPV 824 (1058)
Q Consensus 753 ~~lah~~g~lv~vD~a~~~a-l~g--l~~pg~~-G-aD--i~~~s~hKtf~~P~g~GGPg~G~i~~~-~~l~~~lpg~~v 824 (1058)
+++|+++|+++++|+++..- ..+ ......+ + .| +++.+++|+|+.| |.++|++.+. +++...+-..
T Consensus 188 ~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~----G~R~G~~~~~~~~~~~~~~~~-- 261 (397)
T PRK07568 188 AEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSAC----GARIGCLISKNKELIAAAMKL-- 261 (397)
T ss_pred HHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCC----CcceEEEecCCHHHHHHHHHH--
Confidence 99999999999999986311 011 0011111 1 22 6667888988543 6789999885 3444322000
Q ss_pred ccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceE
Q 001531 825 VSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHE 904 (1058)
Q Consensus 825 g~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e 904 (1058)
. . ...+.+...+. ++..++. .+++.+++..+...++++++.+.|+++..+.+..+.+.++
T Consensus 262 ----------~-~--~~~~~s~~~q~----~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~-- 321 (397)
T PRK07568 262 ----------C-Q--ARLSPPTLEQI----GAAALLD-TPESYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAFY-- 321 (397)
T ss_pred ----------h-h--ccCCCCcHHHH----HHHHHhh-CCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcceE--
Confidence 0 0 01121112221 1122222 2334455555566678888999998752232222333221
Q ss_pred EEEecccccccCCCCHHHHHHHHHH------CCcccc-CCCC---CC--CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 905 FIVDLRGLKNTAGIEPEDVAKRLMD------YGFHGP-TMSW---PV--PGTLMIEPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 905 ~vv~~~~~~~~~g~~~~~v~k~L~~------~Gi~~~-~~~~---p~--~~~Lris~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
++++++ ..+..+++++|.+ +|+.+. ...| |. .+++||++. .+.++++..++.|.+++++.
T Consensus 322 ~~~~l~------~~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~--~~~~~~~~~~~~l~~~l~~~ 393 (397)
T PRK07568 322 IIAKLP------VDDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYV--LNEEDLKRAMEILKEALEKY 393 (397)
T ss_pred EEEecC------CCCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEe--CCHHHHHHHHHHHHHHHHHh
Confidence 345654 1256788888875 588753 2223 21 368999986 34788999999888877653
No 359
>PRK07036 hypothetical protein; Provisional
Probab=99.58 E-value=1e-12 Score=156.64 Aligned_cols=344 Identities=15% Similarity=0.174 Sum_probs=205.6
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCC-ceeeecCchHHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRA 670 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~-~~~l~~~sGa~ge~a~llair~ 670 (1058)
..+|++.+++..++..+. ....+.+ ++.. -..+...++.+.|++++..+ ...++.++|++++++++..+|.
T Consensus 63 ~~lGh~~p~v~~Ai~~q~-~~~~~~~--~~~~-----~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~ 134 (466)
T PRK07036 63 VNVGYGREEMADAIADQA-RRLPYYT--PFGD-----MTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHY 134 (466)
T ss_pred hcCCCCCHHHHHHHHHHH-HhCcccc--cccc-----cCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHH
Confidence 457888887777666652 2211211 1100 00123457788888887532 2346788999999888998898
Q ss_pred HHHHcCCCCCCEEE-EcCCCCCccHHHHHhCC------------cEEEEEcCCC-----CCC-------CCHHHHHHHHH
Q 001531 671 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCG------------MKIVSVGTDA-----KGN-------INIEELRKAAE 725 (1058)
Q Consensus 671 y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G------------~~vv~V~~d~-----~g~-------iD~e~L~~~i~ 725 (1058)
|...+|..+|.+|+ ...++||....+....| ..+..++... .|. ..++.+++.+.
T Consensus 135 ~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~ 214 (466)
T PRK07036 135 YFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKIL 214 (466)
T ss_pred HHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHH
Confidence 87666654566666 46789997754433211 1133444321 111 01345666665
Q ss_pred h-cCCCeEEEEEEcC-CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCc-------cC--CcEEEeCC
Q 001531 726 A-NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY-------IG--ADVCHLNL 791 (1058)
Q Consensus 726 ~-~~~~taaV~vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~-------~G--aDi~~~s~ 791 (1058)
+ +.+++++|+++.- ...|++.+ .+++|.++|++||+++|+|+++ .|+.+.|+ +| +||+++
T Consensus 215 ~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~----tGfGRtG~~~~~~~~~gv~PDivt~-- 288 (466)
T PRK07036 215 SLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVV----TGFGRLGHFFASEAVFGIQPDIITF-- 288 (466)
T ss_pred HcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeech----hCCCcCchhhhhhhhcCCCCCEEEE--
Confidence 3 3478888888764 34576652 3899999999999999999984 45655552 23 688876
Q ss_pred ccccccCCCCCCCceeEEEEeCCCCCCCCCC-CcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHH
Q 001531 792 HKTFCIPHGGGGPGMGPIGVKKHLAPFLPSH-PVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1058)
Q Consensus 792 hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~-~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1058)
.|.++ +|--.+|.+++++++++.+... ..+ . . ....+++.|+++.++++.+.|..+.++++.+
T Consensus 289 gK~l~----gG~~Pi~av~~~~~i~~~~~~~~~~~---------~--~-~~~~~T~~gnpl~~aaa~a~Le~i~~~~l~~ 352 (466)
T PRK07036 289 AKGLT----SGYQPLGAVIISERLLDVISGPNAKG---------N--V-FTHGFTYSGHPVACAAALKNIEIMEREGLCE 352 (466)
T ss_pred ccccc----cCccccEEEEEcHHHHHHHhcccCcC---------c--c-cccCCCCCCCHHHHHHHHHHHHHHHhCCHHH
Confidence 47663 3311367777887766543210 000 0 0 0011124467788888888888887666544
Q ss_pred HHHHHHHHHHHHHHHHhcc--CCee--eccCCCccceEEEEecccccccC-CC---CHHHHHHHHHHCCccccCCCCCCC
Q 001531 871 ASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTA-GI---EPEDVAKRLMDYGFHGPTMSWPVP 942 (1058)
Q Consensus 871 ~a~~~~~~a~yL~~~L~~~--~~v~--~~g~~~~~~~e~vv~~~~~~~~~-g~---~~~~v~k~L~~~Gi~~~~~~~p~~ 942 (1058)
+.....++|+++|+++ ++++ +.|. |. +.-+-+..+....+. .. ....+.+.+.++|+.... ..
T Consensus 353 ---~~~~~g~~l~~~L~~l~~~~~v~~vrG~-Gl-~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~----~~ 423 (466)
T PRK07036 353 ---HVREVGPYFEERLASLRELPLVGDVRGD-HL-MACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRP----LE 423 (466)
T ss_pred ---HHHHHHHHHHHHHHHhccCCCEEEEEee-ce-EEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEee----cC
Confidence 3446677888888653 3322 2231 22 211212111000000 01 135678888999998742 23
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001531 943 GTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1058)
Q Consensus 943 ~~Lris~te~~t~eeid~fi~aL~~i~~e~~~ 974 (1058)
+.++++|+...|++|||+++++|.++++++.+
T Consensus 424 ~~~~l~Ppl~it~~~id~~~~~l~~al~~~~~ 455 (466)
T PRK07036 424 HLCVLSPPLIITRAQIDEIVAILRAAIEETAD 455 (466)
T ss_pred CEEEEeCCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 67999999999999999999999998887743
No 360
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.58 E-value=2.7e-13 Score=160.45 Aligned_cols=319 Identities=16% Similarity=0.218 Sum_probs=186.5
Q ss_pred cccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHH
Q 001531 593 PLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYH 672 (1058)
Q Consensus 593 ~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~ 672 (1058)
.+|++.+.+..++..+. .... .|. + + +.+ ..++.+.|++++......+..++|+++.+++++++|.|.
T Consensus 61 ~lGh~~p~v~~ai~~q~-~~~~--~~~-~-~---~~~----~~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~~ 128 (423)
T TIGR00713 61 ILGHAHPRVVEAVKEAL-ERGT--SYG-A-P---TEA----EILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGYT 128 (423)
T ss_pred ccCCCCHHHHHHHHHHH-HhCC--cCC-C-C---CHH----HHHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHhh
Confidence 46777766665555542 2111 111 0 1 112 347778888877543335678899999888888888762
Q ss_pred HHcCCCCCCEEEE-cCCCCCccHHHHHhC--Cc-----------------EEEEEcCCCCCCCCHHHHHHHHHhcCCCeE
Q 001531 673 KARGDHHRNVCII-PVSAHGTNPATAAMC--GM-----------------KIVSVGTDAKGNINIEELRKAAEANRDNLS 732 (1058)
Q Consensus 673 ~~~G~~~r~~Vli-p~saHg~~pa~a~~~--G~-----------------~vv~V~~d~~g~iD~e~L~~~i~~~~~~ta 732 (1058)
++++||. ..++||.......+. |. .+..++. .|+++|+++++++.++++
T Consensus 129 ------gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~a 197 (423)
T TIGR00713 129 ------GRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPY-----NDLEALEEVFEEYGEEIA 197 (423)
T ss_pred ------CCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCC-----CCHHHHHHHHHHcCCcEE
Confidence 2456665 456888654332211 10 1222222 389999999986557889
Q ss_pred EEEEE-cCCCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCC------cc--CCcEEEeCCccccccCCC
Q 001531 733 TLMVT-YPSTHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG------YI--GADVCHLNLHKTFCIPHG 800 (1058)
Q Consensus 733 aV~vt-~Pn~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg------~~--GaDi~~~s~hKtf~~P~g 800 (1058)
+|++. .|+..|.+.+ .+++|.++|++||+++++|+++. ++ +.| .+ ..|+++ +.|.+ +
T Consensus 198 avi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~----g~-r~g~~~~~~~~~~~pDi~t--~sK~l----~ 266 (423)
T TIGR00713 198 GVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMT----GF-RVALGGAQEYFGVEPDLTT--LGKII----G 266 (423)
T ss_pred EEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc----cc-ccCcchhHHHhCCCcchhh--hhhhh----c
Confidence 88886 6766787753 38999999999999999999863 22 211 12 356653 45666 3
Q ss_pred CCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHH
Q 001531 801 GGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNAN 880 (1058)
Q Consensus 801 ~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~ 880 (1058)
+|..+|++++++++++.+... + . ....+++.++...++++.+.+..+..+++.+.. .+..+
T Consensus 267 -~G~pig~v~~~~~i~~~~~~~--~---------~----~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~---~~~~~ 327 (423)
T TIGR00713 267 -GGLPVGAFGGRREIMERLAPE--G---------P----VYQAGTLSGNPLAMAAGLATLKLLDEEGVYTEL---DELAK 327 (423)
T ss_pred -CCCceeeeeEHHHHHHhhCcC--C---------C----eeeccCCCCCHHHHHHHHHHHHHHhcccHHHHH---HHHHH
Confidence 456789999998776655210 0 0 000011224556666677777777655544332 23344
Q ss_pred HHHHHHh----cc-CCeeeccCCCccceEEEEecccccc---cCCCC---HHHHHHHHHHCCccccCCCCCCCCEEEEEc
Q 001531 881 YMAKRLE----KH-YPILFRGVNGTVAHEFIVDLRGLKN---TAGIE---PEDVAKRLMDYGFHGPTMSWPVPGTLMIEP 949 (1058)
Q Consensus 881 yL~~~L~----~~-~~v~~~g~~~~~~~e~vv~~~~~~~---~~g~~---~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~ 949 (1058)
++++.|+ +. +.....+. +..+ -+.++...... ....+ ...+.+.|.++|+.+....+ +.+++++
T Consensus 328 ~~~~~l~~~~~~~~~~~~v~~~-g~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---~~~~l~~ 402 (423)
T TIGR00713 328 RLAEGLSEVLEDTGIPHTVNRV-GSMF-SLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLPPSQF---EACFLSA 402 (423)
T ss_pred HHHHHHHHHHHhcCCCeEEEee-ccEE-EEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEecCCc---cceeeEC
Confidence 4444443 32 22212222 2222 22233211100 00011 23688899999998764333 4678887
Q ss_pred CCCCCHHHHHHHHHHHHHHHHH
Q 001531 950 TESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 950 te~~t~eeid~fi~aL~~i~~e 971 (1058)
. .|++||+++++.|.+++.+
T Consensus 403 ~--~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 403 A--HTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred C--CCHHHHHHHHHHHHHHHhh
Confidence 6 6899999999999988754
No 361
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.58 E-value=9.3e-13 Score=156.86 Aligned_cols=330 Identities=14% Similarity=0.145 Sum_probs=199.2
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCC-----ceeeecCchHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-----SFSLQPNAGAAGEYAGLM 666 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~-----~~~l~~~sGa~ge~a~ll 666 (1058)
..+|++.+.+..++..+......+.... +. .+...++.+.|++++..+ .+.+..++|++++++++.
T Consensus 75 ~~lGh~~p~v~~Ai~~ql~~~~~~~~~~-~~--------~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~Alk 145 (464)
T PRK06938 75 LALGHNHPVVIEAIQQVLADELPLHTLD-LT--------TPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALK 145 (464)
T ss_pred cccCCCCHHHHHHHHHHHHhhhcccccc-cC--------CHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHH
Confidence 4577877776666665521111111100 00 122336677788776432 233445799999888888
Q ss_pred HHHHHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCC------------cEEEEEcCCCCCC------------CCHHHHH
Q 001531 667 VIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG------------MKIVSVGTDAKGN------------INIEELR 721 (1058)
Q Consensus 667 air~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G------------~~vv~V~~d~~g~------------iD~e~L~ 721 (1058)
.+|.|. +|++|+ +..++||....+..+.| -.+..+|.....+ .+++.++
T Consensus 146 lAr~~t------gr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~ 219 (464)
T PRK06938 146 LVKTAT------GRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLE 219 (464)
T ss_pred HHHHhh------CCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHH
Confidence 888762 344555 56789998766544221 1234555422111 2367888
Q ss_pred HHHHhcC---CCeEEEEEEcC-CCccccc---ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc--------CCcE
Q 001531 722 KAAEANR---DNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADV 786 (1058)
Q Consensus 722 ~~i~~~~---~~taaV~vt~P-n~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~--------GaDi 786 (1058)
+.+++.. +++++|+++.- ...|++. ..++++.++|+++|+++|+|++ +.|+.+.|.+ -+||
T Consensus 220 ~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV----~tGfGRtG~~~a~e~~gv~PDi 295 (464)
T PRK06938 220 NLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEI----QSGFGRTGKMFAFEHAGIIPDV 295 (464)
T ss_pred HHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc----ccCCCcCcHHHHHHhcCCCCCE
Confidence 8886432 36888888643 3456654 2589999999999999999998 5677777743 3689
Q ss_pred EEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001531 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1058)
Q Consensus 787 ~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1058)
+++ .|.+ ++|-| +|.+.+++++ ..+... ...+++.|+++.++++.+.|..+.++
T Consensus 296 v~~--gKgl----ggG~P-lsAv~~~~~~-~~~~~~------------------~~~~T~~gnpla~Aaa~a~L~~l~~~ 349 (464)
T PRK06938 296 VVL--SKAI----GGSLP-LAVVVYREWL-DTWQPG------------------AHAGTFRGNQMAMAAGSATLRYIKEH 349 (464)
T ss_pred EEe--eccc----cCCCc-eEEEeehhHh-hccCCC------------------CCCCCCCcCHHHHHHHHHHHHHHHHh
Confidence 887 4765 44445 6777777664 322100 01112446778888888888888776
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCccceEEEEecccccc----cCC---CCHHHHHHHHHHCCccc
Q 001531 867 GLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKN----TAG---IEPEDVAKRLMDYGFHG 934 (1058)
Q Consensus 867 Gl~~~a~~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~~~~----~~g---~~~~~v~k~L~~~Gi~~ 934 (1058)
++.+. +....++|.++|+++ ++++ +.|. | .+.-+-+...+... ... .-...+.+.+.++|+.+
T Consensus 350 ~l~~~---~~~~G~~l~~~L~~l~~~~~~i~~VrG~-G-lm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~ 424 (464)
T PRK06938 350 RLAEH---AAAMGERLREHLRQLQRDYPQLGDVRGR-G-LMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLIL 424 (464)
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHhCCCeeeeecc-c-eEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEE
Confidence 65443 445567888888764 3332 2332 3 22222221110000 000 01346778888999986
Q ss_pred cCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 935 PTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 935 ~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
.... +..++||+.|+..+|++|||++++++.+++.++
T Consensus 425 ~~~g-~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 461 (464)
T PRK06938 425 ELGG-RHGSVVRFLPPLIITAEQIDEVAEIFAEAVAAA 461 (464)
T ss_pred eecC-CCCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 4322 124789999999999999999999999988764
No 362
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.58 E-value=2.2e-13 Score=146.43 Aligned_cols=332 Identities=18% Similarity=0.259 Sum_probs=213.5
Q ss_pred HHHHHHHhcCccCcCcccccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCCceeee
Q 001531 574 LRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQ 653 (1058)
Q Consensus 574 ~r~~~~l~~~~~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~~~~l~ 653 (1058)
.+|+.-|+.- +....|+|++|+-.....+. +. .+.+. . .-+...+.++.+.+.+++|++.+ +.
T Consensus 59 k~ylDflsay------saVnqGhchpki~~aLqeq~-~k---Ltlss----r--afYnd~~~~f~~~vt~lf~~~kv-lp 121 (427)
T KOG1402|consen 59 KEYLDFLSAY------SAVNQGHCHPKIIKALQEQA-DK---LTLSS----R--AFYNDVLGEFAEYVTKLFGYDKV-LP 121 (427)
T ss_pred cchhhhhhhh------hhcccCCCCHHHHHHHHHHH-hH---hhhhh----H--HHhhhhHHHHHHHHHHhcCccee-ee
Confidence 4555555542 22457999988766666552 11 00000 0 01334566889999999999975 45
Q ss_pred cCchHHHHHHHHHHHHHHHH-HcCCCCCCE-EE-EcCCCCCcc---------HHHHHhCC----cEEEEEcCCCCCCCCH
Q 001531 654 PNAGAAGEYAGLMVIRAYHK-ARGDHHRNV-CI-IPVSAHGTN---------PATAAMCG----MKIVSVGTDAKGNINI 717 (1058)
Q Consensus 654 ~~sGa~ge~a~llair~y~~-~~G~~~r~~-Vl-ip~saHg~~---------pa~a~~~G----~~vv~V~~d~~g~iD~ 717 (1058)
.|.|++|.+.++..+|.|.. .++..+... |+ .-.+.||.. |.+-..+| ..+..||+ -|.
T Consensus 122 mnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y-----~d~ 196 (427)
T KOG1402|consen 122 MNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY-----GDA 196 (427)
T ss_pred cccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc-----CCH
Confidence 77888888888888886542 333332333 33 346778743 32222222 12455665 489
Q ss_pred HHHHHHHHhcCCCeEEEEEEcC-CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc--------CCc
Q 001531 718 EELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GAD 785 (1058)
Q Consensus 718 e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~--------GaD 785 (1058)
++|+.+++ ++++++.|+..- ..-|++.| .++++.++|.+|+++++.|+. +.|+.+.|++ -+|
T Consensus 197 eale~~l~--~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEv----QTGl~RTGk~la~d~env~PD 270 (427)
T KOG1402|consen 197 EALEVALK--SPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEV----QTGLARTGKLLACDYENVRPD 270 (427)
T ss_pred HHHHHHhc--CCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhh----hhcccccCcEEEeehhhcCCC
Confidence 99999998 488888888753 46788864 389999999999999999998 5688888864 478
Q ss_pred EEEeCCccccccCCCCCCCceeEEEEeCCCC-CCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHc
Q 001531 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLA-PFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1058)
Q Consensus 786 i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~-~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1058)
++.+ .|.|+ +|--.+..+.++++++ .+-||.. + + ++.|+++.++.+.+.+..+-
T Consensus 271 ivil--gKalS----GG~~Pvsavl~~~~im~~~~pgeH----------------g--s-TyggNpLg~~vaiAalevi~ 325 (427)
T KOG1402|consen 271 IVIL--GKALS----GGVYPVSAVLADDDIMLNIKPGEH----------------G--S-TYGGNPLGCAVAIAALEVIV 325 (427)
T ss_pred eEEE--ecccc----CCeeeeEEEEecHHHHhccCCCcc----------------c--c-ccCCChHHHHHHHHHHHHHH
Confidence 8876 48774 3322344445555443 3334321 0 1 13356666666777777776
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc---C-Ce--eeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCC
Q 001531 865 SKGLTEASKIAILNANYMAKRLEKH---Y-PI--LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS 938 (1058)
Q Consensus 865 ~eGl~~~a~~~~~~a~yL~~~L~~~---~-~v--~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~ 938 (1058)
++.+. +++......|+.+|.++ + .+ ...|. | .++-.+|+..+ +.+.++-+++-+|.++|..+.+..
T Consensus 326 eekL~---era~~lG~~l~~~L~~l~~~~p~~v~~VRGr-G-l~~ai~i~~~~---~~~~~aw~~cl~lk~~g~LAkptH 397 (427)
T KOG1402|consen 326 EEKLV---ERAAKLGEILRDQLNKLQKKFPHVVKEVRGR-G-LLNAIVINPSK---TSGQDAWDVCLALKENGLLAKPTH 397 (427)
T ss_pred HHHHH---HHHHHHHHHHHHHHHhccccccchhheeecc-c-eEEEEEecccc---ccchhHHHHHHcccccccccCCCC
Confidence 66554 44445667788888765 2 11 12232 2 33444555322 245678899999999999886443
Q ss_pred CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001531 939 WPVPGTLMIEPTESESKEELDRYCDALISIR 969 (1058)
Q Consensus 939 ~p~~~~Lris~te~~t~eeid~fi~aL~~i~ 969 (1058)
.+.+|+.|+...+++|++.-++++.+.+
T Consensus 398 ---~~IiRfaPPL~I~e~dl~eg~e~i~k~i 425 (427)
T KOG1402|consen 398 ---GNIIRFAPPLVISEEDLREGIEAIEKTI 425 (427)
T ss_pred ---CCeEEecCCcccCHHHHHHHHHHHHHHh
Confidence 4689999999999999999999988764
No 363
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.58 E-value=2.6e-13 Score=158.74 Aligned_cols=301 Identities=11% Similarity=0.078 Sum_probs=184.8
Q ss_pred hhcHHHHHHHHHHHHHHHhCC--Cce-eeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcE
Q 001531 627 AQGYQEMFNNLGEWLCTITGF--DSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1058)
Q Consensus 627 ~qG~~~~~~el~~~lael~G~--~~~-~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~ 703 (1058)
.+|..++...+.+++.+..|. +.. .+..++|++. ++.++++.+. .++++|+++.+.+..+...+...|.+
T Consensus 67 ~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~--al~~~~~~l~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~ 139 (388)
T PRK07366 67 FHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQE--GTAHLPLAVL-----NPGDFALLLDPGYPSHAGGVYLAGGQ 139 (388)
T ss_pred CCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHH--HHHHHHHHhC-----CCCCEEEEcCCCCcchHHHHHhcCCE
Confidence 357666666666666665564 444 4666666653 2333344331 25688999988777777778899999
Q ss_pred EEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--ccHHHHHHHHHHcCCEEEEeccCcccc-cCcC
Q 001531 704 IVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLT 777 (1058)
Q Consensus 704 vv~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~al-~gl~ 777 (1058)
++.+|.+++ ...|++++++++. +++++|++++| |.+|.+- +.+++|+++|+++|+++++|+++..-. .+..
T Consensus 140 ~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~ 216 (388)
T PRK07366 140 IYPMPLRAENDFLPVFADIPTEVL---AQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEV 216 (388)
T ss_pred EEEEECCCccCCCCCHHHHHHhhc---ccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCC
Confidence 999999755 3578899988775 67889999999 5788874 358889999999999999999864211 1111
Q ss_pred -CC--Ccc--CCc--EEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhH
Q 001531 778 -SP--GYI--GAD--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (1058)
Q Consensus 778 -~p--g~~--GaD--i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~ 850 (1058)
.+ ..+ ..+ |++.++.|+|+.| |.++|++.+++++...+-.. +...++++. +
T Consensus 217 ~~~~~~~~~~~~~~vi~~~SfSK~~g~~----GlRiG~~v~~~~li~~l~~~--------------~~~~~~~~~---~- 274 (388)
T PRK07366 217 EPPSILQADPEKSVSIEFFTLSKSYNMG----GFRIGFAIGNAQLIQALRQV--------------KAVVDFNQY---R- 274 (388)
T ss_pred CCCChhhCCCCcccEEEEeecccccCCc----chhheehcCCHHHHHHHHHH--------------HhhcccCCC---H-
Confidence 11 111 112 5567888988654 78999999887765543110 011112210 1
Q ss_pred HHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHH-H
Q 001531 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-D 929 (1058)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~-~ 929 (1058)
.+...+.+.+. ...+-+++..+...++.+++.+.|++. .+.+..+.+..+ ++++++.. .+.+..+++++|. +
T Consensus 275 ~~~~~a~~~l~-~~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~f--~~~~~~~~---~~~~~~~~~~~l~~~ 347 (388)
T PRK07366 275 GILNGAIAALT-GPQATVQQTVQIFRQRRDAFINALHQI-GWPVPLPEATMY--VWAKLPEP---WQGNSVEFCTQLVAQ 347 (388)
T ss_pred HHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeeEE--EEEECCcc---cCCCHHHHHHHHHHh
Confidence 11111111111 123345556666667788888889875 222222223222 45666421 0124677887774 6
Q ss_pred CCcccc-CCCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001531 930 YGFHGP-TMSWP--VPGTLMIEPTESESKEELDRYCDALISI 968 (1058)
Q Consensus 930 ~Gi~~~-~~~~p--~~~~Lris~te~~t~eeid~fi~aL~~i 968 (1058)
+|+.+. ...|+ ..+.+||++.. +.++++..++.|++.
T Consensus 348 ~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 348 TGVAASPGSGFGKSGEGYVRFALVH--DPDILEEAVERIAAF 387 (388)
T ss_pred CCEEEeCchHhCcCCCCeEEEEecC--CHHHHHHHHHHHHHh
Confidence 799753 33343 24789999873 578888888777653
No 364
>PRK10534 L-threonine aldolase; Provisional
Probab=99.58 E-value=5.6e-14 Score=160.74 Aligned_cols=282 Identities=12% Similarity=0.147 Sum_probs=168.3
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCc-cHHH-HHhC-CcEEEEEcCC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGT-NPAT-AAMC-GMKIVSVGTD 710 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~-~pa~-a~~~-G~~vv~V~~d 710 (1058)
..++++.+++++|.+.+.+ .++|++++...+++. . .++++|+++.+.|.. +... +... +.+++.++.+
T Consensus 36 ~~~L~~~la~~~g~~~~~v-~~~g~~a~~~~l~~~-~-------~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (333)
T PRK10534 36 VNALQDYAAELSGKEAALF-LPTGTQANLVALLSH-C-------ERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAA 106 (333)
T ss_pred HHHHHHHHHHHhCCCeEEE-eCchHHHHHHHHHHh-c-------CCCCeeEEechhhhhHhcCCchHHhcCceEEeecCC
Confidence 4478899999999987744 445655553333322 1 245788887766632 2211 2333 3788888888
Q ss_pred CCCCCCHHHHHHHHHhc---CCCeEEEEEEcCCCccccc--ccHHHHHHHHHHcCCEEEEeccCccccc-CcCCC-C--c
Q 001531 711 AKGNINIEELRKAAEAN---RDNLSTLMVTYPSTHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQV-GLTSP-G--Y 781 (1058)
Q Consensus 711 ~~g~iD~e~L~~~i~~~---~~~taaV~vt~Pn~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~al~-gl~~p-g--~ 781 (1058)
+++.+|+++|+++++++ ..++++|++++|++ |.+. +++++|+++|+++|+++++|+|+...-. ....+ . .
T Consensus 107 ~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~~-G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~ 185 (333)
T PRK10534 107 ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTHN-GKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEIT 185 (333)
T ss_pred CCCCCCHHHHHHhhcccCcCcccceEEEEecCCC-CeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHH
Confidence 78899999999999621 01688999999886 8865 2467778899999999999998542100 00111 0 1
Q ss_pred cCCcEEEeCCccccccCCCCCCCcee-EEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHH
Q 001531 782 IGADVCHLNLHKTFCIPHGGGGPGMG-PIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 860 (1058)
Q Consensus 782 ~GaDi~~~s~hKtf~~P~g~GGPg~G-~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l 860 (1058)
.+.|.++.+++|.|+++ +| +++.+++++..+... +.....++.. .+..++++.+.+
T Consensus 186 ~~~~~~~~s~SK~~~~~-------~G~~~~~~~~~i~~~~~~------------~~~~~~~~~~----~~~~~a~~~~~l 242 (333)
T PRK10534 186 QYCDSFTICLSKGLGTP-------VGSLLVGNRDYIKRARRW------------RKMTGGGMRQ----AGILAAAGLYAL 242 (333)
T ss_pred hcCCEEEEEeEcCCCCc-------ccceEEcCHHHHHHHHHH------------HHHhCCchhh----HHHHHHHHHHHH
Confidence 13476556788987543 34 566666665443100 0000001110 111111122222
Q ss_pred HHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCC
Q 001531 861 AMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW 939 (1058)
Q Consensus 861 ~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~ 939 (1058)
.. ..+..++..++++++.++|++. +++. + + ..+-+.++++ +.+..++.+.|.++||.+...
T Consensus 243 ~~-----~~~~~~~~~~~r~~l~~~L~~~g~~~~-~-~---~~nfv~~~~~------~~~~~~~~~~l~~~gi~v~~~-- 304 (333)
T PRK10534 243 KH-----NVARLQEDHDNAAWLAEQLREAGADVM-R-Q---DTNMLFVRVG------EEQAAALGEYMRERNVLINAS-- 304 (333)
T ss_pred Hh-----hHHHHHHHHHHHHHHHHHHHhCCCccC-C-C---CceEEEEECC------chhHHHHHHHHHHcCeeecCC--
Confidence 11 1223333445678999999885 4432 1 1 1232445543 124678889999999997522
Q ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001531 940 PVPGTLMIEPTESESKEELDRYCDALISIR 969 (1058)
Q Consensus 940 p~~~~Lris~te~~t~eeid~fi~aL~~i~ 969 (1058)
..+|++.+..+|+++++++++.|++.+
T Consensus 305 ---~~~rl~~~~r~t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 305 ---PIVRLVTHLDVSREQLAEVVAHWRAFL 331 (333)
T ss_pred ---ceEEEEEEeCCCHHHHHHHHHHHHHHh
Confidence 247887776678999999999998654
No 365
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.58 E-value=2.2e-13 Score=155.93 Aligned_cols=270 Identities=17% Similarity=0.159 Sum_probs=170.0
Q ss_pred HHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCCC
Q 001531 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1058)
Q Consensus 635 ~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g~ 714 (1058)
.++++++++++|.+...+..++|++.....+ .+.+ .++ +|+++...|..+...+...|++++.++
T Consensus 50 ~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~--~~~l------~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~------ 114 (330)
T TIGR01140 50 DELRAAAAAYYGLPAASVLPVNGAQEAIYLL--PRLL------APG-RVLVLAPTYSEYARAWRAAGHEVVELP------ 114 (330)
T ss_pred HHHHHHHHHHhCCChhhEEECCCHHHHHHHH--HHHh------CCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC------
Confidence 5788999999998765555556655332222 2221 134 588877766666666788999998887
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCC----ccCCcEE
Q 001531 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG----YIGADVC 787 (1058)
Q Consensus 715 iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg----~~GaDi~ 787 (1058)
|+++++++++ ++.+|++++|+ .+|.+- +.+++|+++|+++|+++++|+++....... ... ..+-+++
T Consensus 115 -d~~~l~~~~~----~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~i~ 188 (330)
T TIGR01140 115 -DLDRLPAALE----ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDA-SLAPQAARFPGLVV 188 (330)
T ss_pred -CHHHHHhhcc----cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCcc-chhhHhccCCCEEE
Confidence 7899998884 46688889994 788886 237888899999999999999864211111 111 1245688
Q ss_pred EeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001531 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1058)
Q Consensus 788 ~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1058)
+.+++|+|+.| |-++|++++++++...+.... ....++ . ....++..++. ..+
T Consensus 189 ~~S~SK~~g~~----G~R~G~i~~~~~~~~~l~~~~--------------~~~~~s--~----~~q~~~~~~l~---~~~ 241 (330)
T TIGR01140 189 LRSLTKFFGLA----GLRLGFVVAHPALLARLREAL--------------GPWTVN--G----PARAAGRAALA---DTA 241 (330)
T ss_pred EEecchhhcCc----hhhhhheeCCHHHHHHHHhcC--------------CCCCch--H----HHHHHHHHHHh---chH
Confidence 89999998543 556899999877655442110 001111 1 11222223332 233
Q ss_pred H-HHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCcccc-CCCCC--CCC
Q 001531 868 L-TEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP-TMSWP--VPG 943 (1058)
Q Consensus 868 l-~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~-~~~~p--~~~ 943 (1058)
+ ++..++...+.+++.+.|++.-.+...+. +.. -++++++ +..++.++|.++||.+. ...|+ ..+
T Consensus 242 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~--f~~~~~~--------~~~~l~~~l~~~gi~v~pg~~f~~~~~~ 310 (330)
T TIGR01140 242 WQAATRARLAAERARLAALLARLGGLEVVGG-TAL--FLLVRTP--------DAAALHEALARRGILIRDFDNFPGLDPR 310 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceECCC-CCe--EEEEEcC--------CHHHHHHHHHHCCEEEEECCCCCCCCCC
Confidence 3 44555666788888888887522322222 222 2456643 35789999999999864 33454 246
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHH
Q 001531 944 TLMIEPTESESKEELDRYCDALI 966 (1058)
Q Consensus 944 ~Lris~te~~t~eeid~fi~aL~ 966 (1058)
++||+++. ..++ ++|+++|+
T Consensus 311 ~iRi~~~~--~~~~-~~~~~~l~ 330 (330)
T TIGR01140 311 YLRFALPT--DEEN-DRLEEALA 330 (330)
T ss_pred EEEEEecC--HHHH-HHHHHhhC
Confidence 89999863 2345 88888763
No 366
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.58 E-value=5.3e-13 Score=162.46 Aligned_cols=300 Identities=13% Similarity=0.089 Sum_probs=194.6
Q ss_pred HHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCC
Q 001531 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1058)
Q Consensus 633 ~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~ 712 (1058)
.+.+.|+.+|+++|.+.+.+..|++++|+.+++++.. +++++||++++.|.+....+.+.|+++++++...+
T Consensus 196 ~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~--------~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n 267 (713)
T PRK15399 196 PHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAA--------PAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRN 267 (713)
T ss_pred HHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhc--------CCCCEEEeecccHHHHHHHHHHcCCeeEEeccccc
Confidence 3779999999999999988889988888877777653 36789999999999888889999999999976542
Q ss_pred -----CCCCH-----HHHHHHHHhcCC--CeEEEEEEcCCCcccccccHHHHHHHHHHcCCEE-EEeccCccc--ccCcC
Q 001531 713 -----GNINI-----EELRKAAEANRD--NLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQV-YMDGANMNA--QVGLT 777 (1058)
Q Consensus 713 -----g~iD~-----e~L~~~i~~~~~--~taaV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv-~vD~a~~~a--l~gl~ 777 (1058)
|.++. +.++++|+++.+ +..++++|+|++.|++- |+++|.+++ |+.+ +||+|+..- +..+.
T Consensus 268 ~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~y-d~~~I~~~~---g~~~ilvDEAhgah~~F~p~~ 343 (713)
T PRK15399 268 ALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLY-NTDWIKQTL---DVPSIHFDSAWVPYTHFHPIY 343 (713)
T ss_pred ccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceee-CHHHHHHHh---CCCEEEEeccchhhhhcCccc
Confidence 45676 999999987642 22689999999999998 899999998 6766 799986421 11111
Q ss_pred CC-----CccCCcEE---EeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhh
Q 001531 778 SP-----GYIGADVC---HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (1058)
Q Consensus 778 ~p-----g~~GaDi~---~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~ 849 (1058)
.+ +.-|+|.+ +.|.||+++. --..+.|-++.. +.-..+.. .. .-....|. .|..
T Consensus 344 ~~~sam~~~~~aD~~i~~tQStHKtL~a-----lTQaS~iHvk~~----vd~~~~n~-------a~-~m~~STSP-sY~L 405 (713)
T PRK15399 344 QGKSGMSGERVPGKVIFETQSTHKMLAA-----FSQASLIHIKGE----YDEETFNE-------AF-MMHTSTSP-SYPI 405 (713)
T ss_pred CCcChhhCCCCCCeeeeeeeehhccccc-----cchheeeeecCC----CCHHHHHH-------HH-HHHcCCCc-HHHH
Confidence 11 11157888 8999999852 123456655432 11000000 00 00011121 2222
Q ss_pred HHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccC--------Ceeec------------------cCC-----
Q 001531 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHY--------PILFR------------------GVN----- 898 (1058)
Q Consensus 850 ~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~--------~v~~~------------------g~~----- 898 (1058)
.+.+-.|..+|. |+.| ++..+..++.+..++++|.+.. .+.-+ |..
T Consensus 406 mASLD~a~~~m~--~~~G-~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~ 482 (713)
T PRK15399 406 VASVETAAAMLR--GNPG-KRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADAD 482 (713)
T ss_pred HHHHHHHHHHHH--hhhh-HHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccc
Confidence 222223333332 2344 3455666777778888886532 22100 000
Q ss_pred ----CccceEEEEeccccc-----ccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001531 899 ----GTVAHEFIVDLRGLK-----NTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIR 969 (1058)
Q Consensus 899 ----~~~~~e~vv~~~~~~-----~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~ 969 (1058)
+|. .+++.++.+. .+.|+++..+++.|.++||.+-... ..++.+.++...|++++++++++|.++.
T Consensus 483 ~~~lDP~--KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d---~~~vL~l~s~g~t~~~~~~L~~aL~~f~ 557 (713)
T PRK15399 483 HMFLDPV--KVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTG---PYNLLFLFSIGIDKTKAMGLLRGLTEFK 557 (713)
T ss_pred cccCCCc--eEEEEecCcccccccccCCCCHHHHHHHHHHcCCEEEecC---CCeEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 111 1233332211 1347889999999999999876444 4678888899999999999999999874
Q ss_pred H
Q 001531 970 E 970 (1058)
Q Consensus 970 ~ 970 (1058)
+
T Consensus 558 ~ 558 (713)
T PRK15399 558 R 558 (713)
T ss_pred H
Confidence 4
No 367
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.58 E-value=3.3e-13 Score=159.36 Aligned_cols=153 Identities=22% Similarity=0.243 Sum_probs=125.3
Q ss_pred HHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---h
Q 001531 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---D 290 (1058)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~---~ 290 (1058)
.++++.+|++.|.+. +.++.+|+++.++++.++ . ++||+||++...|+.+...+...++..|++++++|.. +
T Consensus 66 ~~le~~lA~l~g~~~--al~~~SG~~Ai~~al~al-l--~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~ 140 (427)
T PRK05994 66 AVLEERVAALEGGTA--ALAVASGHAAQFLVFHTL-L--QPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADADDPAS 140 (427)
T ss_pred HHHHHHHHHHhCCCc--EEEEcCHHHHHHHHHHHH-h--CCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCCCHHH
Confidence 357789999999876 778899999999887776 2 3899999999999988887766566789999998764 5
Q ss_pred hhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCCC
Q 001531 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1058)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~GG 367 (1058)
+++ ++++|++|++.+| |++|.+.|+++|+++||++|++++|| +.++.+....|-++|+|+++.|+ |.+++| ||
T Consensus 141 l~~ai~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD-~a~a~~~~~~pl~~gaDivv~S~tK~lgg~---~~ 216 (427)
T PRK05994 141 FERAITPRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVD-NTLASPYLIRPIEHGADIVVHSLTKFLGGH---GN 216 (427)
T ss_pred HHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCccccccCCccccCCcEEEEcCccccCCC---CC
Confidence 555 7788999999987 78999999999999999999999994 45666666677889999999998 777643 45
Q ss_pred CceEEEEE
Q 001531 368 PHAAFLAT 375 (1058)
Q Consensus 368 P~~G~l~~ 375 (1058)
+-+|++..
T Consensus 217 ~~gG~v~~ 224 (427)
T PRK05994 217 SMGGIIVD 224 (427)
T ss_pred cEEEEEEe
Confidence 55666653
No 368
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.58 E-value=1.1e-12 Score=154.99 Aligned_cols=327 Identities=14% Similarity=0.167 Sum_probs=195.7
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCC--ceeeecCchHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIR 669 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~--~~~l~~~sGa~ge~a~llair 669 (1058)
..+|++.+++..++..+. ....+..+..+. .+...++.+.|++++... ...++.+||++++++++..+|
T Consensus 52 ~~lGh~~p~v~~ai~~ql-~~~~~~~~~~~~--------~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr 122 (421)
T PRK09792 52 LNTGHRHPDLVAAVEQQL-QQFTHTAYQIVP--------YESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIAR 122 (421)
T ss_pred hcCCCCCHHHHHHHHHHH-HhccCcccCccC--------CHHHHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHH
Confidence 457888777776666552 221111110011 122347778888887532 234566799999888888888
Q ss_pred HHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCCc-------------EEEEEcCCC--CCC---CCHHHHHHHHHh--cC
Q 001531 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------------KIVSVGTDA--KGN---INIEELRKAAEA--NR 728 (1058)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G~-------------~vv~V~~d~--~g~---iD~e~L~~~i~~--~~ 728 (1058)
.| . +|.+|+ ...++||....+....|. .++.+|+.. ++. -|++.+++.+++ ..
T Consensus 123 ~~---t---gr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~ 196 (421)
T PRK09792 123 AH---T---GRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEA 196 (421)
T ss_pred Hh---c---CCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCC
Confidence 65 2 344555 567899987655433221 134444422 121 245788888864 23
Q ss_pred CCeEEEEEEcC-CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCc------c--CCcEEEeCCccccc
Q 001531 729 DNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY------I--GADVCHLNLHKTFC 796 (1058)
Q Consensus 729 ~~taaV~vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~------~--GaDi~~~s~hKtf~ 796 (1058)
+++++|+++.- +..|+..+ .+++|.++|++||+++|+|+++. |+.+.|. + ..|++++ .|+++
T Consensus 197 ~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t----g~gr~G~~~a~~~~~~~pDi~t~--gK~l~ 270 (421)
T PRK09792 197 KQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQS----GFARTGKLFAMDHYADKPDLMTM--AKSLA 270 (421)
T ss_pred CceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc----CCCCCCchhHHHhcCCCCcEEEe--ehhhc
Confidence 67888877643 34565432 48999999999999999999853 3433332 2 3677655 58774
Q ss_pred cCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHH
Q 001531 797 IPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI 876 (1058)
Q Consensus 797 ~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~ 876 (1058)
||-.+|++++++++.+.+.... ..+++.|+++.++++.+.+..+.++.+.+ +..
T Consensus 271 -----~G~pigav~~~~~i~~~~~~~~------------------~~~T~~gnpl~~aaa~a~l~~l~~~~~~~---~~~ 324 (421)
T PRK09792 271 -----GGMPLSGVVGNANIMDAPAPGG------------------LGGTYAGNPLAVAAAHAVLNIIDKESLCE---RAN 324 (421)
T ss_pred -----CCCceEEEEEcHHHHhccCCCC------------------cCCCCCCCHHHHHHHHHHHHHHHhhhHHH---HHH
Confidence 3456888999887766542110 01113356666677777777775544333 333
Q ss_pred HHHHHHHHHHhcc---CCee--eccCCCccceEEEEeccccc-cc-CCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEc
Q 001531 877 LNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLK-NT-AGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEP 949 (1058)
Q Consensus 877 ~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~~~-~~-~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~ 949 (1058)
...+++.+.|+++ ++.+ ..|. | .+ +.+.+.+-. .. .......+.+.+.++|+.+.... +..+.+|+.|
T Consensus 325 ~~g~~l~~~l~~l~~~~p~v~~vrG~-G-l~--~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~g-~~~~~irl~P 399 (421)
T PRK09792 325 QLGQRLKNTLIDAKESVPAIAAVRGL-G-SM--IAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCG-AYGNVIRFLY 399 (421)
T ss_pred HHHHHHHHHHHHHHHhCCCcceeccc-c-eE--EEEEecCCccCCcchHHHHHHHHHHHHCCcEEeecC-CCCCEEEEeC
Confidence 5566677766653 3321 2221 2 22 334442100 00 00234678888999999874211 2257999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHH
Q 001531 950 TESESKEELDRYCDALISIRE 970 (1058)
Q Consensus 950 te~~t~eeid~fi~aL~~i~~ 970 (1058)
+...+++|||+++++|.+++.
T Consensus 400 ~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 400 PLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred CCcCCHHHHHHHHHHHHHHHh
Confidence 999999999999999988763
No 369
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.58 E-value=1.9e-13 Score=160.00 Aligned_cols=306 Identities=17% Similarity=0.161 Sum_probs=198.0
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCC-
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 712 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~- 712 (1058)
+.|.|+..++++|.+...|+.|+++.|+.++.++.. +++|+||+++..|.++.....+.|...+++....+
T Consensus 72 i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~--------~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np 143 (557)
T COG1982 72 IKEAQELAARVFGADHTYFVVNGTSTANKAVINAVL--------TPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNP 143 (557)
T ss_pred HHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhc--------CCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCc
Confidence 779999999999999988999999988877777653 36789999999999988888899999998865332
Q ss_pred -----CCCCHHHHHHHHHhcCCCe-EEEEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCcccccCc-CCC---Ccc
Q 001531 713 -----GNINIEELRKAAEANRDNL-STLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSP---GYI 782 (1058)
Q Consensus 713 -----g~iD~e~L~~~i~~~~~~t-aaV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl-~~p---g~~ 782 (1058)
|.|+.+.+++.+.++ +.- +++++++|+++|++- ++++|.+.+|+.++|+.+|.++..-..-. ..| -+.
T Consensus 144 ~~gi~ggI~~~~~~~~l~~~-~~~~k~~vitnpTYdGv~~-n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~ 221 (557)
T COG1982 144 LYGIIGGIPLETFKEALLAH-PDAEKLAVITNPTYDGVCY-NLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNG 221 (557)
T ss_pred cccccCCCCHHHHHHHHHhC-hhhheeEEEecCccceEee-cHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhc
Confidence 679999999998765 344 889999999999998 89999999999999999999876433211 112 236
Q ss_pred CCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHH
Q 001531 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 862 (1058)
Q Consensus 783 GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~ 862 (1058)
|+|+++-|.||+++ +.--...|.+++. +.+.-..+... .. -....+. .|.....+-.|.++...
T Consensus 222 ~~~~~tqS~HK~l~-----alSQaS~iHv~~~--~~~~~~r~nea-------~~-~h~STSP-sY~l~ASlD~Ar~~~~~ 285 (557)
T COG1982 222 GADFVTQSTHKLLA-----ALSQASMIHVKDG--RAVNHERFNEA-------LM-MHQSTSP-SYPLMASLDVARMQEGN 285 (557)
T ss_pred CceEEEechhhhhh-----hhhhhHHHhhCCC--ccCCHHHHHHH-------HH-HHccCCc-hHHHHHHHHHHHHhhhh
Confidence 89999999999984 2223445555542 11110000000 00 0011121 23222223333333333
Q ss_pred HchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccC----------CCccceEEEEeccccc---ccCCCCHHHHHHHH
Q 001531 863 MGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGV----------NGTVAHEFIVDLRGLK---NTAGIEPEDVAKRL 927 (1058)
Q Consensus 863 lG~eGl~~~a~~~~~~a~yL~~~L~~~--~~v~~~g~----------~~~~~~e~vv~~~~~~---~~~g~~~~~v~k~L 927 (1058)
-|++=..+.....++.++++++..+.+ +++..++. ++-.-..+.+|..++. .+.|+++.++.+.|
T Consensus 286 ~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~~L 365 (557)
T COG1982 286 AGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAKYL 365 (557)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCCcHHHHHHHH
Confidence 343333344666777777787777664 33332211 0000001223321111 14689999999999
Q ss_pred HHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q 001531 928 MDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALI 966 (1058)
Q Consensus 928 ~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~ 966 (1058)
.++||...... .....+.+++.+..+..+++++++.++
T Consensus 366 ~e~gii~e~~~-d~~~lll~~~~~gk~~~lv~~L~~f~r 403 (557)
T COG1982 366 REHGIIPEETG-DYSNLLLFSPGIGKWQTLVDRLLEFKR 403 (557)
T ss_pred HHcCCeeeecC-CceeeEEeeeccchHHHHHHHHHHHHH
Confidence 99999864332 113457777776455667788887777
No 370
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.58 E-value=3.2e-13 Score=148.16 Aligned_cols=140 Identities=26% Similarity=0.276 Sum_probs=116.5
Q ss_pred HHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchh---hh
Q 001531 216 FQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD---ID 292 (1058)
Q Consensus 216 ~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~~---l~ 292 (1058)
+|+.||.|.|--. +.-+.+|.+|...+++.+. +.||+|+.+...+..+...+....+.+||++++++.++ ++
T Consensus 67 lE~RiAaLEGG~a--a~a~aSG~AA~~~ai~~la---~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~d~~~~~ 141 (426)
T COG2873 67 LEERIAALEGGVA--ALAVASGQAAITYAILNLA---GAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPDDPENFE 141 (426)
T ss_pred HHHHHHHhhcchh--hhhhccchHHHHHHHHHhc---cCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCCCHHHHH
Confidence 5579999998644 3345677777666555543 38999999999999888888766788999999998754 55
Q ss_pred c-cCCCEeEEEEEc-CCCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-ccccc
Q 001531 293 Y-KSGDVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGV 361 (1058)
Q Consensus 293 ~-l~~~t~~V~v~~-pn~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~ 361 (1058)
+ |+++|++|++.. .|.-+.|.|+++|+++||++|++++| ++.++.+.+..|-+.|||||+.|. |++|+
T Consensus 142 ~aI~~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliV-DNT~atpyl~rP~~hGADIVvHS~TK~igG 212 (426)
T COG2873 142 AAIDENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIV-DNTFATPYLCRPIEHGADIVVHSATKYIGG 212 (426)
T ss_pred HHhCcccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEE-ecCCCcceecchhhcCCCEEEEeecccccC
Confidence 5 899999999976 69999999999999999999999999 467777888899999999999998 88765
No 371
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.57 E-value=2.3e-13 Score=160.33 Aligned_cols=154 Identities=19% Similarity=0.217 Sum_probs=123.4
Q ss_pred HHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---hhh
Q 001531 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KDI 291 (1058)
Q Consensus 215 e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~---~~l 291 (1058)
++++.+|++.|.+. +.++.+|++++.++++++. ++||+|+++...|+.+...+....+..|+++.+++. +++
T Consensus 62 ~Le~~lA~l~g~~~--~l~~ssG~~Ai~~al~al~---~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~~d~e~l 136 (425)
T PRK06084 62 VLEQRVAALEGGVG--ALAVASGMAAITYAIQTIA---EAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAHDDIAAL 136 (425)
T ss_pred HHHHHHHHHhCCCc--eeEehhHHHHHHHHHHHHh---CCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECCCCHHHH
Confidence 57789999999764 6788999998888887763 279999999999987777776555667899888764 556
Q ss_pred hc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCCCC
Q 001531 292 DY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGP 368 (1058)
Q Consensus 292 ~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~GGP 368 (1058)
++ +++++++|++.+| |.+|.+.|+++|+++||++|++++| ++.++.+....|.++|+||++.|+ |.|+++ |..
T Consensus 137 e~ai~~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVv-D~a~a~~~~~~p~~~gaDivv~S~tK~l~G~---g~~ 212 (425)
T PRK06084 137 EALIDERTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIV-DNTVATPVLCRPFEHGADIVVHSLTKYIGGH---GTS 212 (425)
T ss_pred HHHhccCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEE-ECCCcccccCChhhcCCCEEEECchhccccc---ccc
Confidence 66 7788999999988 8999999999999999999999999 456777777777889999999998 888654 333
Q ss_pred ceEEEEEeh
Q 001531 369 HAAFLATSQ 377 (1058)
Q Consensus 369 ~~G~l~~~~ 377 (1058)
-+|++..+.
T Consensus 213 ~gG~v~~~~ 221 (425)
T PRK06084 213 IGGIVVDSG 221 (425)
T ss_pred eeEEEEeCC
Confidence 346555443
No 372
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.57 E-value=3.6e-13 Score=141.22 Aligned_cols=302 Identities=17% Similarity=0.207 Sum_probs=190.8
Q ss_pred HHHHHHHHHHHhCCCceeeecCchH-HHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCC--
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD-- 710 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa-~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d-- 710 (1058)
+..+.+.|++.+|||.+.+ +.|+ .+-++.+.++. .++|-|++...+|-+..-+|+..|++|..||-.
T Consensus 63 I~~F~~dlaeFlg~D~~R~--t~GARe~KfavMhal~--------~~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~ 132 (382)
T COG1103 63 IKDFLEDLAEFLGMDEVRV--TAGAREAKFAVMHALC--------KEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGY 132 (382)
T ss_pred HHHHHHHHHHHhCCceeee--cccchhhHHHHHHHhc--------cCCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCC
Confidence 5567778999999998654 3443 34455554443 256888999999988778899999999999954
Q ss_pred CCCCCCHHHHHHHHHhc----CCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCc
Q 001531 711 AKGNINIEELRKAAEAN----RDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 785 (1058)
Q Consensus 711 ~~g~iD~e~L~~~i~~~----~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaD 785 (1058)
++..+++|...+.|++. ++.+++..+|+|. .+|.+. |.+.++++|+++|+++++.+|+..+-... +-.+.|+|
T Consensus 133 Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~-Dakkva~ic~e~gvPlllN~AYt~Grmpv-s~ke~g~D 210 (382)
T COG1103 133 PEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLA-DAKKVAKICREYGVPLLLNCAYTVGRMPV-SGKEIGAD 210 (382)
T ss_pred CceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCch-hhHHHHHHHHHcCCceEeecceeeccccc-cccccCCC
Confidence 34789999988888663 2457888999995 689997 89999999999999999999976443322 23468999
Q ss_pred EEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCC-CCCccchhhHHHHHHH-HHHHHHH
Q 001531 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLG-TIAAAPWGSALILPIS-YTYIAMM 863 (1058)
Q Consensus 786 i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~-~i~sa~~g~~~~~~~a-~a~l~~l 863 (1058)
++++|.||+++. .|| +|+++.++++.+..--+. | +....+... --|+ ..|.+.+..+| .-+..
T Consensus 211 FiVgSGHKsmAA----s~P-iGvl~~~eE~ae~V~r~S-g------~~~~~KEvellGCT-~rGapivTlmASfP~V~-- 275 (382)
T COG1103 211 FIVGSGHKSMAA----SAP-IGVLAMSEEWAEIVLRRS-G------RAFPKKEVELLGCT-VRGAPIVTLMASFPHVV-- 275 (382)
T ss_pred EEEecCccchhc----cCC-eeEEeehhHHHHHHHhhc-c------cccccceeeeeccc-ccCchHHHHHhcCHHHH--
Confidence 999999999863 344 789999988765431110 0 000001100 1143 22333322211 11111
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCccceEEE-Eeccccc---ccCCCCHHHHHHHHHHCCccccCC
Q 001531 864 GSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFI-VDLRGLK---NTAGIEPEDVAKRLMDYGFHGPTM 937 (1058)
Q Consensus 864 G~eGl~~~a~~~~~~a~yL~~~L~~~--~~v~~~g~~~~~~~e~v-v~~~~~~---~~~g~~~~~v~k~L~~~Gi~~~~~ 937 (1058)
+- .+....-+++++++.++|+++ +..+ |. .|..|..+ |..+.|. ++..-...-+-+.|.++||+.-
T Consensus 276 --eR-VkrWdeEv~kaR~fv~elEkigg~~ql--G~-rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI-- 347 (382)
T COG1103 276 --ER-VKRWDEEVEKARWFVAELEKIGGVKQL--GE-RPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGI-- 347 (382)
T ss_pred --HH-HHHHHHHHHHHHHHHHHHHHhhhHHHh--CC-CCcccceeeecCchHHHHHHhCcCCceeeHHHHHhcCcccc--
Confidence 11 123456778999999999986 3332 32 23344332 3333220 0001112234566777777641
Q ss_pred CCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 938 SWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 938 ~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
.-.....+.+++ ...++|+++..++++++|+++
T Consensus 348 ~~G~Tk~~K~sv-yGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 348 QPGQTKYFKLSV-YGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred ccCceeEEEEEe-ecCCHHHHHHHHHHHHHHHHh
Confidence 100123355543 456899999999999999876
No 373
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.57 E-value=9.3e-13 Score=153.44 Aligned_cols=276 Identities=19% Similarity=0.268 Sum_probs=175.3
Q ss_pred HHHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEE-cCCCCCccHHHHHhCCcE-------
Q 001531 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGMK------- 703 (1058)
Q Consensus 632 ~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vli-p~saHg~~pa~a~~~G~~------- 703 (1058)
+...++.++++++++.+. .+..++|++++++++..++.| . ++++|++ ...+||..-......|..
T Consensus 71 ~~~~~la~~l~~~~~~~~-~~~~~sG~~a~~~A~~~a~~~---~---g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~ 143 (377)
T PRK02936 71 SLQEEVASLLAENSAGDL-VFFCNSGAEANEAALKLARKH---T---GKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFG 143 (377)
T ss_pred HHHHHHHHHHHhcCCCCE-EEEeCCcHHHHHHHHHHHHHh---c---CCCeEEEECCCcCCCcHHhhhccCCccccccCC
Confidence 455678888888877654 466788988887777766654 2 3455655 467898776554433321
Q ss_pred -----EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc---ccHHHHHHHHHHcCCEEEEeccCccccc
Q 001531 704 -----IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQV 774 (1058)
Q Consensus 704 -----vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~ 774 (1058)
++.++. .|+++|++.+. +++++|+++.+. ..|... +++++|.++|++||+++++|+++.
T Consensus 144 ~~~~~~~~~~~-----~d~~~l~~~~~---~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~---- 211 (377)
T PRK02936 144 PLLPGFTHVPF-----NDIKALKEVMN---EEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQT---- 211 (377)
T ss_pred CCCCCceEeCC-----CCHHHHHHhcc---CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc----
Confidence 222332 27899999886 789999998764 445553 249999999999999999999863
Q ss_pred CcCCCC------ccC--CcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccc
Q 001531 775 GLTSPG------YIG--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAP 846 (1058)
Q Consensus 775 gl~~pg------~~G--aDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~ 846 (1058)
++.+.| .++ .|+++ +.|+|+ +|..+|++++++++.+.+.... .....+
T Consensus 212 g~g~~g~~~~~~~~~~~~di~t--~sK~l~-----~G~~ig~v~~~~~~~~~~~~~~--------------~~~t~~--- 267 (377)
T PRK02936 212 GIGRTGTLFAYEQFGLDPDIVT--VAKGLG-----NGIPVGAMIGKKELGTAFGPGS--------------HGSTFG--- 267 (377)
T ss_pred CCCcCchhhHHHhhCCCCcEEE--Eccccc-----CCCccEEEEEcHHHHhhccCCC--------------CCCCCC---
Confidence 232222 122 47765 468774 3455788888887766542110 001111
Q ss_pred hhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCccceEEEEecccccccCCCCHH
Q 001531 847 WGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPE 921 (1058)
Q Consensus 847 ~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~~~~~~g~~~~ 921 (1058)
+++..++++.+.+..+..+. ..++...+.++++++|++. ++.. +.+ .+. -+.+++.. +..
T Consensus 268 -~~~~~~aaa~a~l~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~-~g~---~~~i~~~~-------~~~ 332 (377)
T PRK02936 268 -GNPLAMAAAKEVLQVIKQPS---FLEEVQEKGEYFLQKLQEELEHLECVKNIRG-KGL---MIGIECTE-------EVA 332 (377)
T ss_pred -CCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhhCCcEEeEee-cce---EEEEEecc-------hHH
Confidence 23344445555555553222 2344456777888888763 3322 112 121 24455431 367
Q ss_pred HHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001531 922 DVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 968 (1058)
Q Consensus 922 ~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i 968 (1058)
.+.+.|.++|+.+.... .+.+||+|+...++++|+++++.|+++
T Consensus 333 ~~~~~l~~~gv~v~~~g---~~~lRi~p~~~~~~~~i~~~i~~l~~~ 376 (377)
T PRK02936 333 PVIEQLREEGLLVLSAG---PNVIRLLPPLVVTKEELDQAVYLLKKV 376 (377)
T ss_pred HHHHHHHHCCeEEecCC---CCEEEEECCcccCHHHHHHHHHHHHHh
Confidence 88999999998864322 378999999899999999999999765
No 374
>PRK07908 hypothetical protein; Provisional
Probab=99.57 E-value=3.2e-13 Score=155.64 Aligned_cols=280 Identities=15% Similarity=0.112 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g 713 (1058)
..++++.+++.+|.+...+..++|++. ++.++++ + .++ .++++.+.+......++..|++++.++.++++
T Consensus 60 ~~~lr~aia~~~~~~~~~I~it~Ga~~--al~~~~~-l------~~~-~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~ 129 (349)
T PRK07908 60 ERRARAAVAARHGRTPDEVLLLAGAAE--GFALLAR-L------RPR-RAAVVHPSFTEPEAALRAAGIPVHRVVLDPPF 129 (349)
T ss_pred hHHHHHHHHHHhCcChhhEEECCCHHH--HHHHHHh-c------CCC-eEEEeCCCChHHHHHHHHcCCEEEeeccCccc
Confidence 346778888888988766666666652 2333333 2 123 45665444433344567899999999998777
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCC-CccCC-c-EEEe
Q 001531 714 NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP-GYIGA-D-VCHL 789 (1058)
Q Consensus 714 ~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~p-g~~Ga-D-i~~~ 789 (1058)
.+|++++ + ++++++++++|+ .+|.+. +.++|.++|++ +.++++|+++..-..+-..+ ..... + ++..
T Consensus 130 ~~d~~~l----~---~~~~~i~l~np~NPTG~~~-~~~~l~~l~~~-~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~ 200 (349)
T PRK07908 130 RLDPAAV----P---DDADLVVIGNPTNPTSVLH-PAEQLLALRRP-GRILVVDEAFADAVPGEPESLAGDDLPGVLVLR 200 (349)
T ss_pred CcChhHh----c---cCCCEEEEcCCCCCCCCCc-CHHHHHHHHhc-CCEEEEECcchhhccCCccccccccCCCEEEEe
Confidence 8898854 3 567788999994 799998 68999999964 78899999863211111111 11122 3 4455
Q ss_pred CCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHH
Q 001531 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1058)
Q Consensus 790 s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1058)
+++|+|+.| |.++|++++++++.+.+.... ...++++ ....++..++...+.+.++
T Consensus 201 S~SK~~~l~----GlRiG~~~~~~~~~~~~~~~~--------------~~~~~~~------~~~~a~~~~~~~~~~~~~~ 256 (349)
T PRK07908 201 SLTKTWSLA----GLRVGYALGAPDVLARLTRGR--------------AHWPVGT------LQLEAIAACCAPRAVAEAA 256 (349)
T ss_pred ecccccCCc----cceeeeeecCHHHHHHHHhcC--------------CCCCccH------HHHHHHHHHhcccchHHHH
Confidence 889988544 788999999876655432110 0011121 1111122222211223345
Q ss_pred HHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCcccc-CCCCC--CCCEEE
Q 001531 870 EASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP-TMSWP--VPGTLM 946 (1058)
Q Consensus 870 ~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~-~~~~p--~~~~Lr 946 (1058)
+..+....+.+++.+.|++. .+.+..+.+.. -++++++ +.+.+.+.|.++||.+. ...|+ .++++|
T Consensus 257 ~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~--~~~~~~~--------~~~~~~~~l~~~gI~v~~g~~f~~~~~~~vR 325 (349)
T PRK07908 257 ADAARLAADRAEMVAGLRAV-GARVVDPAAAP--FVLVRVP--------DAELLRKRLRERGIAVRRGDTFPGLDPDYLR 325 (349)
T ss_pred HHHHHHHHHHHHHHHHHHhC-CcEeccCCCce--EEEEECC--------cHHHHHHHHHhCCEEEEECCCCCCCCCCeEE
Confidence 55666677888899999875 33222222212 2456654 25688889999999864 23343 257999
Q ss_pred EEcCCCCCHHHHHHHHHHHHHHHH
Q 001531 947 IEPTESESKEELDRYCDALISIRE 970 (1058)
Q Consensus 947 is~te~~t~eeid~fi~aL~~i~~ 970 (1058)
|++. +.+|+++|+++|++++.
T Consensus 326 is~~---~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 326 LAVR---PRAEVPVLVQALAEILK 346 (349)
T ss_pred EEeC---CCccHHHHHHHHHHHHh
Confidence 9994 67899999999988743
No 375
>PRK06460 hypothetical protein; Provisional
Probab=99.57 E-value=7.8e-13 Score=153.88 Aligned_cols=213 Identities=21% Similarity=0.223 Sum_probs=151.1
Q ss_pred HHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchh-
Q 001531 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD- 290 (1058)
Q Consensus 212 ~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~~- 290 (1058)
...++++.+|+++|.+. +.++.+|++++.++++++ . ++||+|+++...++.+...+...++..|++++.++.++
T Consensus 46 ~~~~L~~~lA~l~g~~~--~v~~~sG~~ai~~~l~al-~--~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~~ 120 (376)
T PRK06460 46 TVLELTKKIVELENAEM--GVAFSSGMGAISTTALAL-L--KPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGSD 120 (376)
T ss_pred cHHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHH-h--CCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCCH
Confidence 34567789999999876 556788888777777665 2 38999999988886666666555667899999887642
Q ss_pred --hhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCC
Q 001531 291 --IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 365 (1058)
Q Consensus 291 --l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~ 365 (1058)
+++ +++++++|++.+| |.+|.+.|+++|+++||++|++++|| +..+.+....+.++|+||++.|. |.|++ .
T Consensus 121 ~~l~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivD-ea~~~~~~~~~l~~~~divv~S~sK~l~G---~ 196 (376)
T PRK06460 121 NIIEKAKSKRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVD-ATFSTPINQKPLELGADIVVHSASKFLAG---H 196 (376)
T ss_pred HHHHHhcCCCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEE-CCcCccccCChhhcCCCEEEeecceeccC---C
Confidence 334 4678999999998 78999999999999999999999994 44554433345568999999998 87752 2
Q ss_pred CCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHH
Q 001531 366 GGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1058)
Q Consensus 366 GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ 445 (1058)
|+.-+|+++.++++.+++- ..++. .+++. .+. ..|+...+.+-++.
T Consensus 197 ~~~~~G~~~~~~~l~~~l~-------------------------~~~~~---~g~~~-~~~-----~a~~~l~~~~~l~~ 242 (376)
T PRK06460 197 NDVIAGLAAGYGKLLNVID-------------------------QMRRT---LGTSL-DPH-----AAYLTLRGIKTLKI 242 (376)
T ss_pred CCceEEEEecCHHHHHHHH-------------------------HHHHh---cCCCC-CHH-----HHHHHHhchhhHHH
Confidence 2334688888777665441 00111 12221 111 12334455566777
Q ss_pred HHHHHHHHHHHHHHHHhcCCCe
Q 001531 446 IAQRVHGLAGTFALGLKKLGTV 467 (1058)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~G~~ 467 (1058)
..+++.+++.++++.|++.+.+
T Consensus 243 r~~~~~~n~~~l~~~L~~~p~v 264 (376)
T PRK06460 243 RMDVINRNAEQIAEFLEGHPKV 264 (376)
T ss_pred HHHHHHHHHHHHHHHHHcCCCc
Confidence 8888999999999999987544
No 376
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.57 E-value=3.4e-13 Score=156.56 Aligned_cols=289 Identities=15% Similarity=0.157 Sum_probs=180.9
Q ss_pred cHHHHHHHHHHHHHHHhCC--CceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEE
Q 001531 629 GYQEMFNNLGEWLCTITGF--DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVS 706 (1058)
Q Consensus 629 G~~~~~~el~~~lael~G~--~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~ 706 (1058)
|..++...+.+++.+..|. +...+..++|++. ++.++++.+. .+++.|+++.+.+..+...+...|.+++.
T Consensus 66 g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~--~l~~~~~~~~-----~~gd~v~v~~P~y~~~~~~~~~~g~~~~~ 138 (368)
T PRK03317 66 DAVALRADLAAYLTAQTGVGLTVENVWAANGSNE--ILQQLLQAFG-----GPGRTALGFVPSYSMHPIIARGTHTEWVE 138 (368)
T ss_pred chHHHHHHHHHHhhhhccCCCChhhEEECCCHHH--HHHHHHHHhc-----CCCCEEEEeCCChHHHHHHHHhcCCeeEE
Confidence 5444454555555555454 4456667777653 3334444442 25678999888766666667889999999
Q ss_pred EcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcc-cccCcCCCCc---
Q 001531 707 VGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMN-AQVGLTSPGY--- 781 (1058)
Q Consensus 707 V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~-al~gl~~pg~--- 781 (1058)
++.+++..+|++++++++++ .++++|++++|+ .+|.+. +.+++.++++.+++++++|+++.. ...+......
T Consensus 139 ~~~~~~~~~d~~~l~~~~~~--~~~~~i~l~~p~NPtG~~~-~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~ 215 (368)
T PRK03317 139 GPRAADFTLDVDAAVAAIAE--HRPDVVFLTSPNNPTGTAL-PLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLP 215 (368)
T ss_pred cccCCCCCCCHHHHHHHHhc--cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHH
Confidence 98776678999999999973 456778889995 699998 689999999888999999998642 1111111001
Q ss_pred cCCc-EEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHH
Q 001531 782 IGAD-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 860 (1058)
Q Consensus 782 ~GaD-i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l 860 (1058)
...+ +++.++.|.|+. .|.++|++++++++...+... + .+..++ ...+ .++.+.+
T Consensus 216 ~~~~~i~~~SfSK~~g~----~GlRiG~~~~~~~~~~~l~~~------------~--~~~~~s--~~~~----~a~~~~l 271 (368)
T PRK03317 216 EYPRLVVSRTMSKAFAF----AGGRLGYLAAAPAVVDALRLV------------R--LPYHLS--AVTQ----AAARAAL 271 (368)
T ss_pred hCCCEEEEEechhhhcc----chhhhhhhhCCHHHHHHHHhc------------C--CCCCCC--HHHH----HHHHHHh
Confidence 1124 445577887753 367899999887766544210 0 001111 1112 1222222
Q ss_pred HHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEE-ecccccccCCCCHHHHHHHHHHCCccccCCCC
Q 001531 861 AMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIV-DLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW 939 (1058)
Q Consensus 861 ~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv-~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~ 939 (1058)
.. .+.+.+..++...+.+++.+.|++. .+.+..+.+.+ +++ ++. +..++.+.|.++||.+....
T Consensus 272 ~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~---~~~~~~~--------~~~~~~~~l~~~Gv~v~~~~- 336 (368)
T PRK03317 272 RH--ADELLASVAALRAERDRVVAWLREL-GLRVAPSDANF---VLFGRFA--------DRHAVWQGLLDRGVLIRDVG- 336 (368)
T ss_pred hC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCEeCCCCCcE---EEEeccC--------CHHHHHHHHHHCCEEEEeCC-
Confidence 21 1233444455556777888888764 22222222332 233 321 46789999999999876433
Q ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001531 940 PVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1058)
Q Consensus 940 p~~~~Lris~te~~t~eeid~fi~aL~~i~~ 970 (1058)
.++.+||+++ +.+++++|+++|+++++
T Consensus 337 -~~~~iRi~~~---~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 337 -IPGWLRVTIG---TPEENDAFLAALAEVLA 363 (368)
T ss_pred -CCCeEEEecC---CHHHHHHHHHHHHHHHH
Confidence 2579999975 67899999999998764
No 377
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.57 E-value=6.6e-13 Score=154.81 Aligned_cols=212 Identities=17% Similarity=0.143 Sum_probs=151.6
Q ss_pred HHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---hh
Q 001531 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1058)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~---~~ 290 (1058)
.++++.+|++.|.+ .+.++.+|++++..+++++. ++||+|+++...|+++...+...++..++++..++. ++
T Consensus 55 ~~L~~~lA~l~g~~--~~i~~~sg~~Ai~~~l~~l~---~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~ 129 (386)
T PRK08045 55 DVVQRALAELEGGA--GAVLTNTGMSAIHLVTTVFL---KPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQA 129 (386)
T ss_pred HHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHHc---CCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCCCCHHH
Confidence 34668999999965 48889999988887777652 389999999999998888877666666778887653 45
Q ss_pred hhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCCC
Q 001531 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1058)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~GG 367 (1058)
+++ +++++++|++.+| |.+|.+.|+++|.++||++|++++|| +..+.+....|-++|+|++++|+ |+++++- +
T Consensus 130 l~~~l~~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivD-eay~~~~~~~pl~~gaDivv~S~tK~l~G~~---d 205 (386)
T PRK08045 130 LRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVD-NTFLSPALQNPLALGADLVLHSCTKYLNGHS---D 205 (386)
T ss_pred HHHhcccCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEE-CCCCccccCCchhhCCCEEEeecceeccCCC---C
Confidence 655 7778999999998 68999999999999999999999994 45555656677889999999998 8775431 1
Q ss_pred CceEEEEEe-hhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHH
Q 001531 368 PHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1058)
Q Consensus 368 P~~G~l~~~-~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~i 446 (1058)
--+|++.++ +++.+++ ++.+....+|. .++ ..|+...|-+-|...
T Consensus 206 ~~~G~vi~~~~~~~~~l----------------------------~~~~~~~g~~~-~p~-----~~~l~~rgl~tl~~R 251 (386)
T PRK08045 206 VVAGVVIAKDPDVVTEL----------------------------AWWANNIGVTG-GAF-----DSYLLLRGLRTLVPR 251 (386)
T ss_pred ceeEEEEeCcHHHHHHH----------------------------HHHHHhcCCCC-CHH-----HHHHHHhhhccHHHH
Confidence 114666553 4443322 00000011111 111 123455555567777
Q ss_pred HHHHHHHHHHHHHHHhcCCCeE
Q 001531 447 AQRVHGLAGTFALGLKKLGTVE 468 (1058)
Q Consensus 447 a~~~~~~a~~l~~~L~~~G~~~ 468 (1058)
.+++.+++..+++.|++.+.++
T Consensus 252 ~~~~~~na~~la~~L~~~p~v~ 273 (386)
T PRK08045 252 MELAQRNAQAIVKYLQTQPLVK 273 (386)
T ss_pred HHHHHHHHHHHHHHHHcCCCEe
Confidence 7888999999999999886454
No 378
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.57 E-value=8.4e-13 Score=153.71 Aligned_cols=291 Identities=21% Similarity=0.229 Sum_probs=175.7
Q ss_pred HHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcC-CCCCccHHHHHhCCcEE---EEEc
Q 001531 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPV-SAHGTNPATAAMCGMKI---VSVG 708 (1058)
Q Consensus 633 ~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~-saHg~~pa~a~~~G~~v---v~V~ 708 (1058)
...++++.+++++|.+. .+..++|+++...++.+++.+...+|. ++++|++++ ++|+.........+-.+ ...+
T Consensus 70 ~~~~l~~~la~~~g~~~-~~~~~sg~~a~~~a~~~~~~~~~~~~~-~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~ 147 (379)
T TIGR00707 70 PQEELAEKLVEHSGADR-VFFCNSGAEANEAALKLARKYTGDKGK-EKKKIIAFENSFHGRTMGALSATGQPKYQKGFEP 147 (379)
T ss_pred HHHHHHHHHHhhCCCCE-EEEeCCcHHHHHHHHHHHHHHhhccCC-CCCeEEEECCCcCCccHHHHHhcCChhhhccCCC
Confidence 35588999999999884 466778888776666666654322221 356777754 55655443322211111 1122
Q ss_pred CCCCCC----CCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc---ccHHHHHHHHHHcCCEEEEeccCccccc--CcCC
Q 001531 709 TDAKGN----INIEELRKAAEANRDNLSTLMVTYPS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQV--GLTS 778 (1058)
Q Consensus 709 ~d~~g~----iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~--gl~~ 778 (1058)
...+.. .|+++|+++++ +++++|+++.++ +.|+.. +++++|.++|+++|+++++|+++. .++ +...
T Consensus 148 ~~~~~~~~~~~d~~~l~~~~~---~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~-~~~~~g~~~ 223 (379)
T TIGR00707 148 LVPGFSYAPYNDIESLKKAID---DETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQT-GIGRTGKFF 223 (379)
T ss_pred CCCCceeeCCCCHHHHHHHhh---hCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhh
Confidence 222211 28999999997 678899987654 456532 258999999999999999999974 121 1000
Q ss_pred C-Cc--cCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHH
Q 001531 779 P-GY--IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 855 (1058)
Q Consensus 779 p-g~--~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~ 855 (1058)
+ .. ...|+++ ++|+|+ +|.++|++++++++++.+..... . ...+. +...+++
T Consensus 224 ~~~~~~~~~d~~t--~sK~~~-----~G~riG~~~~~~~~~~~~~~~~~-------------~-~~~~~----~~~~~~a 278 (379)
T TIGR00707 224 AYEHYGIEPDIIT--LAKGLG-----GGVPIGATLAKEEVAEAFTPGDH-------------G-STFGG----NPLACAA 278 (379)
T ss_pred hHHhcCCCCCEEE--Eccccc-----CCcccEEEEEcHHHHhhhcCCCC-------------C-CCCCC----CHHHHHH
Confidence 1 11 2356664 468874 46779999998777665421100 0 01111 2333444
Q ss_pred HHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccc
Q 001531 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 934 (1058)
Q Consensus 856 a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~ 934 (1058)
+.+.+..+...+ ..++...++++++++|++. .........+ .-..+.+.++ .+..++.++|.++||.+
T Consensus 279 a~aaL~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~g~~~~~~~~-------~~~~~~~~~l~~~Gv~v 347 (379)
T TIGR00707 279 ALAVLEVIEKER---LLENVKEKGDYFKERLEELGKNYPNKEVRG-KGLMLGIELE-------APCKDIVKKALEKGLLV 347 (379)
T ss_pred HHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHhhCCCCcccc-CceEEEEEec-------CcHHHHHHHHHHCCcEE
Confidence 555555554333 3345556778888888764 2221100000 0112344543 13578999999999987
Q ss_pred cCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001531 935 PTMSWPVPGTLMIEPTESESKEELDRYCDALISI 968 (1058)
Q Consensus 935 ~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i 968 (1058)
.... .+.+||+++...|+++++++++.|+++
T Consensus 348 ~~~~---~~~lRi~~~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 348 NCAG---PKVLRFLPPLIITKEEIDEAVSALEEA 378 (379)
T ss_pred eeCC---CCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 5322 378999999888999999999999875
No 379
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.57 E-value=2.8e-13 Score=155.72 Aligned_cols=281 Identities=18% Similarity=0.154 Sum_probs=172.5
Q ss_pred cHHHHHHHHHHHHHHHhCCCce-eeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEc---CCCCCccHHHHHhCCcEE
Q 001531 629 GYQEMFNNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIP---VSAHGTNPATAAMCGMKI 704 (1058)
Q Consensus 629 G~~~~~~el~~~lael~G~~~~-~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip---~saHg~~pa~a~~~G~~v 704 (1058)
|..+...++++.+++++|.+.. .+..++|.+++.+++.++. +++++|+++ ...|.++...+.+.|.++
T Consensus 51 g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~--------~~gd~Vli~~~d~p~~~s~~~~~~l~ga~~ 122 (346)
T TIGR03576 51 GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALE--------PPGRKVVHYLPEKPAHPSIPRSCKLAGAEY 122 (346)
T ss_pred CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhC--------CCCCEEEECCCCCCCchhHHHHHHHcCCEE
Confidence 5557788999999999999543 3556677766654444432 356788874 346777667788899986
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCCccccc--ccHHHHHHHHHHcCCEEEEeccCcccccCc-CC-C-
Q 001531 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGL-TS-P- 779 (1058)
Q Consensus 705 v~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~al~gl-~~-p- 779 (1058)
+.. .|+++++. . +++++|+++..+..|.+- .++++|+++|+++|+++++|+|+.....+. .. +
T Consensus 123 ~~~-------~~l~~l~~-~----~~~~lIiitg~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~ 190 (346)
T TIGR03576 123 FES-------DELSELKK-I----DGTSLVVITGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPA 190 (346)
T ss_pred ecc-------CCHHHHhh-C----cCceEEEEECCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCH
Confidence 432 25555432 2 567788888777778771 379999999999999999999975432121 11 1
Q ss_pred CccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHH
Q 001531 780 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 859 (1058)
Q Consensus 780 g~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~ 859 (1058)
-.+|.|+++.+++|++ +|+.+|++++++++++.+.... + . -.++.+ ....+++.+.
T Consensus 191 ~~~~~divv~s~SKal------aG~r~G~v~~~~~li~~l~~~~-----------~--~-~~~s~~----~~~~~aa~~a 246 (346)
T TIGR03576 191 LDLGADLVVTSTDKLM------DGPRGGLLAGRKELVDKIKSVG-----------E--Q-FGLEAQ----APLLAAVVRA 246 (346)
T ss_pred HHcCCcEEEeccchhc------cccceEEEEeCHHHHHHHHHhh-----------c--C-cccCcc----HHHHHHHHHH
Confidence 2357899999999955 4788999999987766542110 0 0 011111 1122233333
Q ss_pred HHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCC-HHHHHHHHHHCCccccC-C
Q 001531 860 IAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIE-PEDVAKRLMDYGFHGPT-M 937 (1058)
Q Consensus 860 l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~-~~~v~k~L~~~Gi~~~~-~ 937 (1058)
+..+. .....+....+.+++.+.|++ +.+ ++.+.+ -+.++++ +.+ .+.+.+.|.++||.+.. .
T Consensus 247 L~~~~---~~~~~~~l~~r~~~~~~~l~~-~~~-~~~~~~----f~~~~~~------~~~~~~~~~~ll~~~gV~v~~~~ 311 (346)
T TIGR03576 247 LEEFE---LSRIRDAFKRKEEVYLRLFDK-LNV-ERTPTG----FVIKGVE------EEKLIEIGLDLLRNYGIITITAV 311 (346)
T ss_pred Hhhcc---HHHHHHHHHHHHHHHHHHHHh-CCC-CcCCCe----EEEEeCC------CCCHHHHHHHHHHhCCEEEeCCc
Confidence 43322 233334444566666666664 343 222212 1445653 122 34455556678998643 3
Q ss_pred CCC-CCCEEEEEcCCCC-CHHHHHHHHHHHHHH
Q 001531 938 SWP-VPGTLMIEPTESE-SKEELDRYCDALISI 968 (1058)
Q Consensus 938 ~~p-~~~~Lris~te~~-t~eeid~fi~aL~~i 968 (1058)
.|+ .++++||++.... ++.++++|+++|++.
T Consensus 312 ~f~~~~~~vRis~~~~~~~~~~~~~~~~al~~~ 344 (346)
T TIGR03576 312 GMPGASKTLRFDLAAKDAERIGDDYLVEAVKDS 344 (346)
T ss_pred ccCCCCCeEEEEEecChHHhcCHHHHHHHHHhc
Confidence 354 3689999987532 233799999999764
No 380
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.56 E-value=4.7e-13 Score=156.91 Aligned_cols=212 Identities=16% Similarity=0.159 Sum_probs=150.5
Q ss_pred HHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---hh
Q 001531 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1058)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~---~~ 290 (1058)
.++++.+|++.|.+. ..++.+|++++..+++++ . ++||+|+++...|+.+...++..++..|++++.++. ++
T Consensus 63 ~~Le~~lA~l~g~~~--~v~~~sG~~Ai~~~l~al-l--~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~d~~~ 137 (405)
T PRK08776 63 DLLGEALAELEGGAG--GVITATGMGAINLVLNAL-L--QPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLTDPRS 137 (405)
T ss_pred HHHHHHHHHHhCCCc--eEEEcCHHHHHHHHHHHH-h--CCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCCCHHH
Confidence 346689999999754 567888888877777666 3 389999999999998887777666778999988875 45
Q ss_pred hhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCCC
Q 001531 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1058)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~GG 367 (1058)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|| +.++.+....|.++|+|++++|+ |.|++| |+
T Consensus 138 l~~~i~~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD-~a~a~~~~~~pl~~gaDivv~S~tK~l~g~---~~ 213 (405)
T PRK08776 138 LADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVD-NTFLSPALQKPLEFGADLVLHSTTKYINGH---SD 213 (405)
T ss_pred HHHhcCcCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEE-CCCcccccCCcccccCCEEEecCceeecCC---CC
Confidence 555 7788999999998 79999999999999999999999994 45555555567789999999998 888654 22
Q ss_pred CceEEEEEe-hhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHH
Q 001531 368 PHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1058)
Q Consensus 368 P~~G~l~~~-~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~i 446 (1058)
-.+|.+.++ +++.+++- ..+..-+ ++ ..++ .+ ++...|-+-++.+
T Consensus 214 ~~~G~vv~~~~~l~~~l~-------------------------~~~~~~g---~~-~s~~---~a--~l~~~gl~tl~~r 259 (405)
T PRK08776 214 VVGGAVVARDAELHQQLV-------------------------WWANALG---LT-GSPF---DA--FLTLRGLRTLDAR 259 (405)
T ss_pred ceEEEEEeCCHHHHHHHH-------------------------HHHHhcC---CC-CCHH---HH--HHHHhhhCcHHHH
Confidence 224666554 44443330 0000001 11 0111 11 1233455556677
Q ss_pred HHHHHHHHHHHHHHHhcCCCeE
Q 001531 447 AQRVHGLAGTFALGLKKLGTVE 468 (1058)
Q Consensus 447 a~~~~~~a~~l~~~L~~~G~~~ 468 (1058)
.++..+++..+.+.|++.+.++
T Consensus 260 ~~~~~~na~~la~~L~~~p~v~ 281 (405)
T PRK08776 260 LRVHQENADAIAALLDGHAAVN 281 (405)
T ss_pred HHHHHHHHHHHHHHHHcCCCee
Confidence 7888899999999999876454
No 381
>PLN02721 threonine aldolase
Probab=99.56 E-value=3e-13 Score=155.70 Aligned_cols=273 Identities=15% Similarity=0.104 Sum_probs=172.8
Q ss_pred HHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc----
Q 001531 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 288 (1058)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~---- 288 (1058)
..++++.+|+++|.+. +.++.+||.+..+++.++.. .+||+|++++..|.+...... .++..|++++.++.
T Consensus 42 ~~~l~~~la~~~~~~~--~~~~~~Gs~a~~~~l~~~~~--~~gd~Vl~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~~~~ 116 (353)
T PLN02721 42 ALRLEEEMAKIFGKEA--ALFVPSGTMGNLISVLVHCD--VRGSEVILGDNSHIHLYENGG-ISTLGGVHPRTVKNNEDG 116 (353)
T ss_pred HHHHHHHHHHHhCCce--eEEecCccHHHHHHHHHHcc--CCCCeEEEcCccceehhcccc-hhhhcCceeEecCCCcCC
Confidence 3467889999999875 56777788776655555421 279999999999976655210 13456888877653
Q ss_pred ----hhhhc-cC-------CCEeEEEEEcC--CCceeecc---HHHHHHHHHhcCcEEEEEeccccccCC----CCCC--
Q 001531 289 ----KDIDY-KS-------GDVCGVLVQYP--GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTIL----KPPG-- 345 (1058)
Q Consensus 289 ----~~l~~-l~-------~~t~~V~v~~p--n~~G~i~d---l~~I~~~a~~~galliV~a~~~slg~l----~~p~-- 345 (1058)
+++++ ++ +++++|+++++ |++|.+.| +++|.++||++|++++++. ...++.. .++.
T Consensus 117 ~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~-a~~~~~~~~~~~~~~~~ 195 (353)
T PLN02721 117 TMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDG-ARIFNASVALGVPVHRL 195 (353)
T ss_pred CcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEc-hhhhcchhhhCCCHHHH
Confidence 44555 55 58899998764 46787765 7899999999999999943 2222211 1222
Q ss_pred cccceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchh
Q 001531 346 ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQ 424 (1058)
Q Consensus 346 ~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~ 424 (1058)
..++|.++.++ |+|++ |..++++.++++++.+... .. ...++.+. .
T Consensus 196 ~~~~d~~~~s~sK~l~~------~~G~~~~~~~~~~~~~~~~-----~~-------------------~~~~~~~~---~ 242 (353)
T PLN02721 196 VKAADSVSVCLSKGLGA------PVGSVIVGSKSFIRKAKRL-----RK-------------------TLGGGMRQ---V 242 (353)
T ss_pred hhhCCEEEEecccccCC------ceeeEEecCHHHHHhHHHH-----HH-------------------hcCCCeeh---h
Confidence 24789988887 87754 3335566677765543100 00 00000000 0
Q ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEE-cCCCCccEEEEecC----C-HHHHHHHHHHcCce
Q 001531 425 ALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEV-QGLPFFDTVKVKCA----D-AHAIASAAYKIEMN 498 (1058)
Q Consensus 425 ~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l-~~~~~~~~v~i~~~----~-~~~l~~~L~~~GI~ 498 (1058)
+..+ ++++. .+ .+-++++ ++..++++++.+.|++++++++ ...+..+-+.+..+ . ..++.++|.++||.
T Consensus 243 ~~~~-~~~~~-~l--~~~~~~~-~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~ 317 (353)
T PLN02721 243 GVLA-AAALV-AL--QENVPKL-EDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGSRITAEKLCKSLEEHGVL 317 (353)
T ss_pred HHHH-HHHHH-HH--HHHHHHH-HHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCccccHHHHHHHHHhCCcE
Confidence 1111 11110 11 1112222 3335678899999999844755 43322222444432 2 67899999999999
Q ss_pred eeeccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 499 LRVVDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 499 ~~~~~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
++....+.+|++++.+++++|+++++++|..
T Consensus 318 v~~~~~~~lR~~~~~~~~~~~i~~~~~~l~~ 348 (353)
T PLN02721 318 LMPGNSSRIRVVTHHQISDSDVQYTLSCFQQ 348 (353)
T ss_pred EecCCCceEEEEecCcCCHHHHHHHHHHHHH
Confidence 9887778999999999999999999999963
No 382
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.56 E-value=8.8e-13 Score=155.36 Aligned_cols=360 Identities=14% Similarity=0.139 Sum_probs=200.8
Q ss_pred HHHHHHHHHhcCccCcCcccccccccccC----Ccccccccc-----cccccccccCCCCchhhhhcHHHHHHHHHHHHH
Q 001531 572 ELLRYIHLLQSKELSLCHSMIPLGSCTMK----LNATTEMMP-----VTWPSFANIHPFAPADQAQGYQEMFNNLGEWLC 642 (1058)
Q Consensus 572 e~~r~~~~l~~~~~~~~~~~i~lGs~t~~----~~~~~~~~~-----~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~la 642 (1058)
..++.+.++-..+- ...+|+|+.|.+. +++...... +....+..|.| .+|..++...+.+++.
T Consensus 17 ~~~~~~~~~~~~~~--~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~------~~G~~~lr~aia~~~~ 88 (409)
T PLN00143 17 DAVKFLKENFNEDD--HRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAP------TGGILPARRAIADYLS 88 (409)
T ss_pred HHHHHHHHhcccCC--CCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCC------CCCCHHHHHHHHHHHH
Confidence 34444444322332 2457788877664 333322211 11122233433 3566555555555555
Q ss_pred HHhCC--CceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCC-C-CCCCHH
Q 001531 643 TITGF--DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-K-GNINIE 718 (1058)
Q Consensus 643 el~G~--~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~-~-g~iD~e 718 (1058)
+..|. +...+..++|++. ++.++++.+. .+++.|+++.+.+..+...+...|.+++.++.++ + ..+|++
T Consensus 89 ~~~g~~~~~~~I~it~G~~~--al~~~~~~l~-----~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 161 (409)
T PLN00143 89 NDLPYQLSPDDVYLTLGCKH--AAEIIIKVLA-----RPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLD 161 (409)
T ss_pred hhcCCCCCHhhEEEecChHH--HHHHHHHHHc-----CCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHH
Confidence 54454 3445555566552 3344444432 2567899998877777777889999999999853 3 468999
Q ss_pred HHHHHHHhcCCCeEEEEEEcCC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCcc-cccCcC-CC-CccCC--c-EEEe
Q 001531 719 ELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVGLT-SP-GYIGA--D-VCHL 789 (1058)
Q Consensus 719 ~L~~~i~~~~~~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~-al~gl~-~p-g~~Ga--D-i~~~ 789 (1058)
+|+++++ ++++.+++++|| .+|.+- +.+++|.++|+++|+++++|+++.. ...+-. .| ..+.. . |++.
T Consensus 162 ~l~~~~~---~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~ 238 (409)
T PLN00143 162 AVEAIAD---ENTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLG 238 (409)
T ss_pred HHHHhcc---cCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEc
Confidence 9999886 678899999994 789885 2588999999999999999998742 111110 11 11211 1 5566
Q ss_pred CCccccccCCCCCCCceeEEEEe-C-CCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001531 790 NLHKTFCIPHGGGGPGMGPIGVK-K-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1058)
Q Consensus 790 s~hKtf~~P~g~GGPg~G~i~~~-~-~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1058)
++.|+|+.| |.++|++++. + .+...+. ..... ...... +.+++...+. ++..++...+.+-
T Consensus 239 SfSK~f~~p----GlRvG~~v~~~p~~~~~~~~--~~~~~------~~~~~~-~~~~~~~~q~----a~~~~l~~~~~~~ 301 (409)
T PLN00143 239 SISKRWMIP----GWGLGWLVTCDPSGLLQICE--IADSI------KKALNP-APFPPTFIQA----AIPEILEKTTEDF 301 (409)
T ss_pred cchhhcCCC----ccceEEEEeeCchhhhhhHH--HHHHH------HHHHhc-cCCCCchHHH----HHHHHHhcChHHH
Confidence 778887654 8899999984 2 3322110 00000 000000 1111111121 1122222111233
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCC-CHHHHHHHH-HHCCccc-cCCCCCCCC
Q 001531 868 LTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGI-EPEDVAKRL-MDYGFHG-PTMSWPVPG 943 (1058)
Q Consensus 868 l~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~-~~~~v~k~L-~~~Gi~~-~~~~~p~~~ 943 (1058)
+++..+....+.+++.+.|++. .......+++.++ ++++++.... .+. +..++..+| .++|+.+ +...|...+
T Consensus 302 ~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f--~w~~l~~~~~-~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~ 378 (409)
T PLN00143 302 FSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFF--ALVKLNLLLL-EDIEDDMEFCLKLAKEESLIILPGVTVGLKN 378 (409)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEE--EEEecchhhc-CCCCCHHHHHHHHHHhCCEEEeCccccCCCC
Confidence 4555555556667777888764 1111112223232 4566642100 022 355666555 6889975 333354568
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 944 TLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 944 ~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
.+||+++. +.++++..++.|+++++.
T Consensus 379 ~iRi~~~~--~~~~l~~al~rl~~~l~~ 404 (409)
T PLN00143 379 WLRITFAV--EQSSLEDGLGRLKSFCGR 404 (409)
T ss_pred eEEEEEcC--CHHHHHHHHHHHHHHHHH
Confidence 99999973 477888888888776654
No 383
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.56 E-value=7.2e-13 Score=156.29 Aligned_cols=269 Identities=18% Similarity=0.163 Sum_probs=168.3
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHH----HHHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa----~a~~~G~~vv~V~~ 709 (1058)
..++++.++++.|.+.+ +..++|..+..++++++ . +++++||++...|+.+.. .+...|+++++++
T Consensus 71 ~~~le~~la~l~g~~~~-v~fsSG~~Ai~~al~~l---l-----~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 140 (437)
T PRK05613 71 VEALENRIASLEGGVHA-VAFASGQAAETAAILNL---A-----GAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE- 140 (437)
T ss_pred HHHHHHHHHHHhCCCeE-EEeCCHHHHHHHHHHHh---c-----CCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-
Confidence 56789999999998643 55667765553333332 1 256889998777765532 2456899999998
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
+. .|+++++++++ ++|++|++..| |.+|.+. ||++|+++||++|++++||+++. .+.+..|.++|+|+++
T Consensus 141 ~~---~d~e~l~~~l~---~~tk~V~~e~~~Np~~~v~-di~~I~~la~~~gi~livD~t~a--~g~~~~p~~~GaDivv 211 (437)
T PRK05613 141 NP---DDPESWQAAVQ---PNTKAFFGETFANPQADVL-DIPAVAEVAHRNQVPLIVDNTIA--TAALVRPLELGADVVV 211 (437)
T ss_pred CC---CCHHHHHHhCC---ccCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCeEEEECCCc--cccccChHHhCCCEEE
Confidence 33 38999999997 78988888777 5678877 89999999999999999999864 3334677789999999
Q ss_pred eCCccccccCCCCCCCc---eeEEEEeCCCCCC--------CCCCCcccC--------CCCCCCC--------CCCCCCC
Q 001531 789 LNLHKTFCIPHGGGGPG---MGPIGVKKHLAPF--------LPSHPVVST--------GGIPAPE--------KSQPLGT 841 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg---~G~i~~~~~l~~~--------lpg~~vg~~--------~d~g~~~--------~~~~t~~ 841 (1058)
+|+||+++ |+| +|.++.+..+... +|. .+... .+.++.. ....++.
T Consensus 212 ~S~~K~l~------G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 284 (437)
T PRK05613 212 ASLTKFYT------GNGSGLGGVLIDGGKFDWTVERDGKPVFPY-FVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGA 284 (437)
T ss_pred eeccceec------CCCcceeEEEEecCcccccccccccccCCC-CCCCccccccccccccchHHHHHHHHHHHHHhcCC
Confidence 99999884 332 3445544332100 110 00000 0000000 0000111
Q ss_pred CCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCC---eeeccCCCccceEEEEecccccccCCC
Q 001531 842 IAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYP---ILFRGVNGTVAHEFIVDLRGLKNTAGI 918 (1058)
Q Consensus 842 i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~---v~~~g~~~~~~~e~vv~~~~~~~~~g~ 918 (1058)
.- .. --+|+...|-+-|..+.++..+||..+++.|+++.. |.|+|. + .-
T Consensus 285 ~~--------~p--~~a~l~~rgl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgl------------~------~~ 336 (437)
T PRK05613 285 TL--------SP--FNAWVTAQGLDTLSLRLERHNENAIKVAEFLNNHEKVAKVNFAGL------------K------DS 336 (437)
T ss_pred CC--------CH--HHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcceEECCCC------------C------CC
Confidence 11 01 124456667777887888899999999999998743 334321 0 01
Q ss_pred CHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 001531 919 EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALIS 967 (1058)
Q Consensus 919 ~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~ 967 (1058)
...+++++....|+ .+.+-|.+. .+.+...+|++.|+-
T Consensus 337 p~~~~~~~~~~~g~---------gg~~sf~l~--~~~~~~~~f~~~l~l 374 (437)
T PRK05613 337 PWYATKEKLGLKYT---------GSVLSFDIK--GGKDEAWAFIDALKL 374 (437)
T ss_pred ccHHHHHHhcCCCC---------ceEEEEEec--CCHHHHHHHHHhCCc
Confidence 23455555322221 244444442 357888899988863
No 384
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.56 E-value=2.9e-13 Score=156.90 Aligned_cols=275 Identities=16% Similarity=0.135 Sum_probs=167.0
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHH----HHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~----a~~~G~~vv~V~~ 709 (1058)
..++++.++++.+ + ..+..++|+.+..+++.++ . +++++||++...++..... +...|++++.++.
T Consensus 53 ~~~Le~~lA~l~~-~-~~v~~~sG~~Ai~~~l~al---l-----~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~ 122 (366)
T PRK07582 53 WRALEAALGELEG-A-EALVFPSGMAAITAVLRAL---L-----RPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPT 122 (366)
T ss_pred HHHHHHHHHHHcC-C-CEEEECCHHHHHHHHHHHh---c-----CCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECC
Confidence 3467888999883 3 3455667776553333332 1 3568899987655433322 3457999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
++++ + .+. +++++|++++|+ ++|.+. |+++|+++||++|++++||+++.... ...|.++|+|+++
T Consensus 123 ~~~~----~----~~~---~~t~lV~le~p~NPtg~v~-di~~I~~~a~~~g~~lvVD~t~~~~~--~~~p~~~g~Divv 188 (366)
T PRK07582 123 AGMA----E----AAL---AGADLVLAETPSNPGLDVC-DLAALAAAAHAAGALLVVDNTTATPL--GQRPLELGADLVV 188 (366)
T ss_pred CChH----H----Hhc---cCceEEEEECCCCCCCCcc-CHHHHHHHHHHcCCEEEEECCCCCcc--ccCchhcCCcEEE
Confidence 5332 1 222 688999999996 677676 79999999999999999999864222 2356678999999
Q ss_pred eCCccccccCCCCCCCceeEEEEe-CCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001531 789 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~G~i~~~-~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1058)
.++||+++.| +|-.+|+++++ +++.+.+... + ..++. +.+++ .+| +...|-+-
T Consensus 189 ~S~sK~l~G~---~g~~~G~v~~~~~~l~~~l~~~------------~-~~~g~-~~~~~-------~a~--l~~r~l~t 242 (366)
T PRK07582 189 ASDTKALTGH---SDLLLGYVAGRDPELMAAVERW------------R-LLAGA-IPGPF-------EAW--LAHRSLGT 242 (366)
T ss_pred ecccccccCC---CCeeEEEEEcCcHHHHHHHHHH------------H-HHhCC-CCCHH-------HHH--HHHhcccc
Confidence 9999998421 23347988875 3444332100 0 00111 11111 123 33444444
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC---CeeeccCC-Cc-----------cceEEEEecccccccCCCCHHHHHHHHHHCCc
Q 001531 868 LTEASKIAILNANYMAKRLEKHY---PILFRGVN-GT-----------VAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 932 (1058)
Q Consensus 868 l~~~a~~~~~~a~yL~~~L~~~~---~v~~~g~~-~~-----------~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi 932 (1058)
+..+.++..+++..+++.|+++. .|.|+|-+ .| +-..+.|++. +.+++.+.|...++
T Consensus 243 l~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~--------~~~~~~~~~~~l~~ 314 (366)
T PRK07582 243 LGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA--------DAAAAERFVAASRL 314 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC--------CHHHHHHHHHhCCc
Confidence 56666778899999999999862 34555521 11 1112334432 34555555555565
Q ss_pred cccCCCC---------C------C-CCEEEEEcCCCCCHHHHHHHHHHHH
Q 001531 933 HGPTMSW---------P------V-PGTLMIEPTESESKEELDRYCDALI 966 (1058)
Q Consensus 933 ~~~~~~~---------p------~-~~~Lris~te~~t~eeid~fi~aL~ 966 (1058)
.....+| + + ++.+|+|+.....++.|+.|.++|.
T Consensus 315 ~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~ 364 (366)
T PRK07582 315 VVAATSFGGVHTSADRRARWGDAVPEGFVRLSCGIEDTDDLVADLERALD 364 (366)
T ss_pred ceecccCCCccchhhhHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 4321111 0 1 3679999988766666677766664
No 385
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.56 E-value=2.5e-13 Score=158.78 Aligned_cols=286 Identities=16% Similarity=0.070 Sum_probs=179.1
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHH----HHHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa----~a~~~G~~vv~V~~ 709 (1058)
..++++.++++.|.+.+ +..++|..|...+++++ . +++++||++...|+.+.. .+...|++++.++.
T Consensus 67 ~~~Le~~lA~l~g~~~~-l~~~sgt~Ai~~~l~al---~-----~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~ 137 (394)
T PRK07050 67 SLALAQRLAEIEGGRHA-LLQPSGLAAISLVYFGL---V-----KAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDP 137 (394)
T ss_pred HHHHHHHHHHHhCCCeE-EEeccHHHHHHHHHHHH---h-----CCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECC
Confidence 45788999999998754 44567776664444333 1 256899999887775442 35678999998875
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
+ |.++++++++ ++|++|++++|+ .+|... |+++|+++||++|+++++|+++. .+.+.+|.+.|+|+++
T Consensus 138 ~-----~~~~l~~~i~---~~tklV~le~p~Np~~~~~-di~~I~~ia~~~gi~livD~a~a--~~~~~~~l~~GaDi~v 206 (394)
T PRK07050 138 L-----IGAGIADLIQ---PNTRLIWLEAPGSVTMEVP-DVPAITAAARARGVVTAIDNTYS--AGLAFKPFEHGVDISV 206 (394)
T ss_pred C-----CHHHHHHhcC---CCCeEEEEECCCCCCccHh-hHHHHHHHHHHcCCEEEEECCcc--cccccCHHHcCCeEEE
Confidence 2 5578998886 789999999995 677777 89999999999999999999864 3345677788999999
Q ss_pred eCCccccccCCCCCCCceeEEEEe-CCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001531 789 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~G~i~~~-~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1058)
.+++|+++. +++..+|.++++ +++.+.+-.. + +.++. +.++ . -+++...|-+.
T Consensus 207 ~S~tK~~~g---~~~~~gG~v~~~~~~~~~~~~~~------------~-~~~G~-~~~~-------~--~a~l~lr~l~t 260 (394)
T PRK07050 207 QALTKYQSG---GSDVLMGATITADAELHAKLKLA------------R-MRLGI-GVSA-------D--DCSLVLRGLPS 260 (394)
T ss_pred EECCceecC---CCCeeEEEEEECCHHHHHHHHHH------------H-HhcCC-CCCH-------H--HHHHHHcCCCc
Confidence 999999851 222235666664 4444332100 0 01111 1111 1 12344555566
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC---CeeeccCCC------------ccceEEEEecccccccCCCCHHHHHHHHHHCCc
Q 001531 868 LTEASKIAILNANYMAKRLEKHY---PILFRGVNG------------TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 932 (1058)
Q Consensus 868 l~~~a~~~~~~a~yL~~~L~~~~---~v~~~g~~~------------~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi 932 (1058)
+..+.++..++|..+++.|+++. .+.|++-.. ...+.+.|.+..-. ...+.+++.++|...++
T Consensus 261 l~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~--~~~~~~~~~~~l~~~~~ 338 (394)
T PRK07050 261 LQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERY--SPAQVDAFVEALELFAI 338 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCC--CHHHHHHHHHcCCCCee
Confidence 77677788889999999998752 233333111 12233444442100 01235566666665554
Q ss_pred cc--cC----CC-----------CCC-CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 933 HG--PT----MS-----------WPV-PGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 933 ~~--~~----~~-----------~p~-~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
-. +. +. ++. ++.+|+|+.. |+.|.++++|.+.++.
T Consensus 339 ~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGl----E~~~dl~~dl~~al~~ 391 (394)
T PRK07050 339 GWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIGL----EDEADLIADLEQALEA 391 (394)
T ss_pred ccccCCccceEeeCcccccchhhcCCCCCEEEEEeCc----CCHHHHHHHHHHHHHH
Confidence 22 11 10 111 2678999875 4566666666666554
No 386
>PRK08363 alanine aminotransferase; Validated
Probab=99.56 E-value=5.4e-13 Score=156.61 Aligned_cols=306 Identities=14% Similarity=0.088 Sum_probs=178.0
Q ss_pred hcHHHHHHHHHHHHHHHhCC--CceeeecCchH-HHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEE
Q 001531 628 QGYQEMFNNLGEWLCTITGF--DSFSLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1058)
Q Consensus 628 qG~~~~~~el~~~lael~G~--~~~~l~~~sGa-~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~v 704 (1058)
+|..++...+.+++....|. +...+..++|+ +|. .++++.+. .+++.|+++...|..+...+...|.++
T Consensus 70 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al---~~~~~~~~-----~~gd~Vl~~~p~y~~~~~~~~~~g~~~ 141 (398)
T PRK08363 70 EGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEAL---QLIFGALL-----DPGDEILIPGPSYPPYTGLVKFYGGVP 141 (398)
T ss_pred CCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHH---HHHHHHhC-----CCCCEEEEcCCCCcchHHHHHHcCCEE
Confidence 46555454444444444453 34444444554 343 33333331 256889999887777777788899998
Q ss_pred EEE-cCCCC-CCCCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCccc-ccC-cC
Q 001531 705 VSV-GTDAK-GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG-LT 777 (1058)
Q Consensus 705 v~V-~~d~~-g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~a-l~g-l~ 777 (1058)
+.+ +.+++ +.+|+++|+++++ +++++|++++|+ .+|.+- +++++|+++|+++|+++++|+++..- +.+ ..
T Consensus 142 v~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~ 218 (398)
T PRK08363 142 VEYRTIEEEGWQPDIDDIRKKIT---EKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHV 218 (398)
T ss_pred EEeccccccCCcCCHHHHHhhCC---cceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCccc
Confidence 888 55555 4789999999986 688999999984 788875 25999999999999999999986311 111 00
Q ss_pred CCCcc-CCc--EEEeCCccccccCCCCCCCceeEEEE--eCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHH
Q 001531 778 SPGYI-GAD--VCHLNLHKTFCIPHGGGGPGMGPIGV--KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1058)
Q Consensus 778 ~pg~~-GaD--i~~~s~hKtf~~P~g~GGPg~G~i~~--~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~ 852 (1058)
....+ +.+ ++..+++|+|+. .|.++|++++ ++++.+.+-... .. ......+.+...+..
T Consensus 219 ~~~~~~~~~~vi~~~SfSK~~~~----~GlRiG~~~~~~~~~~~~~l~~~~-~~----------~~~~~~~~s~~~q~~- 282 (398)
T PRK08363 219 SPGSLTKDVPVIVMNGLSKVYFA----TGWRLGYIYFVDPEGKLAEVREAI-DK----------LARIRLCPNTPAQFA- 282 (398)
T ss_pred CHHHcCcCCcEEEEecchhccCC----ccceEEEEEEeCcHHHHHHHHHHH-HH----------HhcccccCChHHHHH-
Confidence 11111 112 445678898754 4788999998 444332211000 00 000011111112211
Q ss_pred HHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHH-HHHHHCC
Q 001531 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA-KRLMDYG 931 (1058)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~-k~L~~~G 931 (1058)
+..++.. ..+.+++..++...+.+++.+.|+++..+.+..+.+.++ +++.++.. ...+..+++ +.|.++|
T Consensus 283 ---~~~~l~~-~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~--~~~~l~~~---~~~~~~~~~~~~l~~~g 353 (398)
T PRK08363 283 ---AIAGLTG-PMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFY--IFPRIEEG---PWKDDKEFVLDVLHEAH 353 (398)
T ss_pred ---HHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCCeEEE--EEEEeccC---CCCCHHHHHHHHHHhCC
Confidence 2222221 234556666667778888999997742222222333322 23344310 012344554 5567899
Q ss_pred ccc-cCCCCCC--CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 932 FHG-PTMSWPV--PGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 932 i~~-~~~~~p~--~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
|.+ +...|+. .+.+||++. .+++++++.++.|++++.+
T Consensus 354 V~v~~g~~f~~~~~~~iRis~~--~~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 354 VLFVHGSGFGEYGAGHFRLVFL--PPVEILEEAMDRFEEFMRE 394 (398)
T ss_pred EEEeCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 986 3333432 478999985 4578888888888876654
No 387
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.56 E-value=6.1e-13 Score=157.85 Aligned_cols=286 Identities=14% Similarity=0.113 Sum_probs=177.7
Q ss_pred HHHHHHHHhC--CC-ceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCC
Q 001531 637 LGEWLCTITG--FD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1058)
Q Consensus 637 l~~~lael~G--~~-~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g 713 (1058)
+++.+++.++ .. ...+..++|++. ++.++++.+. .+++.|+++++.++.+...+++.|++++.+|.+++|
T Consensus 126 lr~~ia~~~~~~~~~~~~Iiit~G~~~--al~~~~~~l~-----~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~g 198 (431)
T PRK15481 126 LHAWAARWLRDDCPVAFEIDLTSGAID--AIERLLCAHL-----LPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAEG 198 (431)
T ss_pred HHHHHHHHHhhccCCcCeEEEecCcHH--HHHHHHHHhC-----CCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCCC
Confidence 4444555444 22 224555566553 3334444432 256889999987777777789999999999997766
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEE-cC-CCcccccc--cHHHHHHHHHHc-CCEEEEeccCcccc-cCcCCCC--ccCCc
Q 001531 714 NINIEELRKAAEANRDNLSTLMVT-YP-STHGVYEE--GIDEICKIIHDN-GGQVYMDGANMNAQ-VGLTSPG--YIGAD 785 (1058)
Q Consensus 714 ~iD~e~L~~~i~~~~~~taaV~vt-~P-n~~G~i~~--dI~eI~~lah~~-g~lv~vD~a~~~al-~gl~~pg--~~GaD 785 (1058)
+|+++|+++++ +++++++++ +| |++|.+-+ ..++|.++|+++ +++++.|.++.--. .+...+. ...--
T Consensus 199 -~~~~~l~~~~~---~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~v 274 (431)
T PRK15481 199 -MQPEKLERALA---QGARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRW 274 (431)
T ss_pred -CCHHHHHHHHh---cCCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCE
Confidence 89999999997 567788876 77 57898862 356999999999 99999999863111 1111111 11122
Q ss_pred EEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHch
Q 001531 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1058)
Q Consensus 786 i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1058)
|+..++.|+|+ | |.++|++.+++++...+-.. ......+++ ...+ .++..++. -|.
T Consensus 275 i~~~SfSK~~~-~----GlRiG~~i~~~~~~~~~~~~------------~~~~~~~~s--~~~q----~a~~~~l~-~~~ 330 (431)
T PRK15481 275 ALIRSVSKALG-P----DLRLAFVASDSATSARLRLR------------LNSGTQWVS--HLLQ----DLVYACLT-DPE 330 (431)
T ss_pred EEEeeeccccC-C----CceeEEEeCCHHHHHHHHHH------------HhccccCCC--HHHH----HHHHHHHh-Ccc
Confidence 66778889886 5 67899999887655443100 000001111 1112 12222222 121
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccC-CCCCC
Q 001531 866 --KGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWPV 941 (1058)
Q Consensus 866 --eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~-~~~p~ 941 (1058)
+-+++..+....+.+++.+.|++. +.+. .+++..+ ++++++ .+..++.+.|.++|+.+.. ..|..
T Consensus 331 ~~~~l~~~~~~~~~~r~~~~~~L~~~~~~~~--~p~gg~f--~~~~l~-------~~~~~~~~~l~~~gV~v~pg~~f~~ 399 (431)
T PRK15481 331 YQARLAQARLFYAQRRQKLARALQQYGIAIP--SPGDGLN--LWLPLD-------TDSQATALTLAKSGWLVREGEAFGV 399 (431)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCccc--cCCCeEE--EEEECC-------CCHHHHHHHHHHCCcEEecCCcccc
Confidence 124455566667778888888875 3322 2223332 456664 1467899999999998643 33421
Q ss_pred ---CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001531 942 ---PGTLMIEPTESESKEELDRYCDALISIR 969 (1058)
Q Consensus 942 ---~~~Lris~te~~t~eeid~fi~aL~~i~ 969 (1058)
.+.+||++... ++++++++++.|++++
T Consensus 400 ~~~~~~iRis~~~~-~~~~i~~~~~~l~~~~ 429 (431)
T PRK15481 400 SAPSHGLRITLSTL-NDAEINRLAADLHQAL 429 (431)
T ss_pred CCCCCeEEEEcCCC-ChHHHHHHHHHHHHHh
Confidence 35799999764 5889999999998875
No 388
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.56 E-value=6.5e-13 Score=154.49 Aligned_cols=283 Identities=16% Similarity=0.164 Sum_probs=176.2
Q ss_pred HHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCCCC
Q 001531 636 NLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNI 715 (1058)
Q Consensus 636 el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g~i 715 (1058)
++++.+++.+|.+...+..++|++. ++.++++.+. .++++|+++.+.++.+...++..|++++.++.++++.+
T Consensus 75 ~lr~~ia~~~~~~~~~i~~t~G~~~--~l~~~~~~~~-----~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~ 147 (371)
T PRK05166 75 ALREAIAARTGVPADRIILGNGSED--LIAVICRAVL-----RPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGF 147 (371)
T ss_pred HHHHHHHHHhCcCHHHEEEcCCHHH--HHHHHHHHhc-----CCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCC
Confidence 5778889999988766666667652 2333333331 25678999877665555667889999999999888889
Q ss_pred CHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHH--cCCEEEEeccCcccccCcCCCC------ccCCc-
Q 001531 716 NIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQVGLTSPG------YIGAD- 785 (1058)
Q Consensus 716 D~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~--~g~lv~vD~a~~~al~gl~~pg------~~GaD- 785 (1058)
|+++++++++ +++++|++++|+ .+|.+- +.+++.++++. .++++++|+++..-..+-..|. +.+..
T Consensus 148 ~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~-~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~v 223 (371)
T PRK05166 148 DLDALCAAVA---RAPRMLMFSNPSNPVGSWL-TADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPW 223 (371)
T ss_pred CHHHHHHhhh---cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCE
Confidence 9999999997 677888999994 789886 45555555443 4889999998631111101111 11112
Q ss_pred EEEeCCccccccCCCCCCCceeEEEEe-CCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHc
Q 001531 786 VCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1058)
Q Consensus 786 i~~~s~hKtf~~P~g~GGPg~G~i~~~-~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1058)
|+..++.|+|+. .|.++|++.+. +++.+.+-. . +...+++ ...+. ++.+.+ ..
T Consensus 224 i~i~SfSK~~~l----~GlRiG~~i~~~~~l~~~~~~-~-------------~~~~~~~--~~~q~----~~~~~l--~~ 277 (371)
T PRK05166 224 IVLRTFSKAYGL----AGLRVGYGLVSDPELVGLLDR-V-------------RTPFNVN--GAAQA----AALAAL--DD 277 (371)
T ss_pred EEEeechHhhhc----chhheeeeecCCHHHHHHHHH-h-------------ccCCCCC--HHHHH----HHHHHh--cC
Confidence 556677787754 47899998764 444433210 0 0011121 11121 111111 12
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCC-CCCCC
Q 001531 865 SKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-WPVPG 943 (1058)
Q Consensus 865 ~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~-~p~~~ 943 (1058)
.+.+++..+....+.+++.+.|++. .+.+..+.+ .+ ++++++ .+..++.+.|.++||.+.... +...+
T Consensus 278 ~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~p~~g-~f--l~~~~~-------~~~~~l~~~l~~~gi~v~p~~~~~~~~ 346 (371)
T PRK05166 278 EEHLAKGVALALAERERLKKELAEM-GYRIAPSRA-NF--LFFDAR-------RPASAVAEALLRQGVIVKPWKQPGFET 346 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC-cCeeCCCcC-CE--EEEeCC-------CCHHHHHHHHHHCCeEEecCCCCCCCC
Confidence 2334555555667778888999875 222212223 22 455643 356889999999999864332 22468
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001531 944 TLMIEPTESESKEELDRYCDALISIR 969 (1058)
Q Consensus 944 ~Lris~te~~t~eeid~fi~aL~~i~ 969 (1058)
.+||+++ +.++.++|+++|+.++
T Consensus 347 ~iRi~~~---~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 347 FIRVSIG---SPEENDHFVAALDKVL 369 (371)
T ss_pred eEEEEcC---CHHHHHHHHHHHHHHh
Confidence 8999996 5788999999998764
No 389
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.56 E-value=3.9e-13 Score=156.16 Aligned_cols=216 Identities=18% Similarity=0.123 Sum_probs=144.4
Q ss_pred HHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHH----HHhCCcEEEEEcCC
Q 001531 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTD 710 (1058)
Q Consensus 635 ~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~----a~~~G~~vv~V~~d 710 (1058)
.++++.++++.|.+.+. ..++|..|..++++++. +++++||+++..++..... ....|+++..++.+
T Consensus 53 ~~lE~~lA~l~g~~~~~-~~~sG~~Ai~~al~all--------~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~ 123 (377)
T TIGR01324 53 FALQDAMCELEGGAGCY-LYPSGLAAVTNSILAFV--------KAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPL 123 (377)
T ss_pred HHHHHHHHHHhCCCcEE-EECcHHHHHHHHHHHhc--------CCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCC
Confidence 47889999999987654 45567665544443331 3568899887655433221 34578988887642
Q ss_pred CCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEEe
Q 001531 711 AKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHL 789 (1058)
Q Consensus 711 ~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~~ 789 (1058)
+.++++++++ ++|++|++++|+ .+|... ||++|+++||++|+++++|+++.. +.+.+|.++|+|+++.
T Consensus 124 -----~~e~l~~~i~---~~tklV~lesp~Np~g~~~-dl~~I~~la~~~g~~livD~t~a~--g~~~~pl~~gaDivv~ 192 (377)
T TIGR01324 124 -----IGEDIATLIQ---PNTKVLFLEAPSSITFEIQ-DIPAIAKAARNPGIVIMIDNTWAA--GLLFKPLEHGVDISIQ 192 (377)
T ss_pred -----CHHHHHHhcC---CCceEEEEECCCCCCCcHH-HHHHHHHHHHHcCCEEEEECCCcc--ccccCccccCceEEEe
Confidence 2378988886 789999999995 678887 899999999999999999998753 3345688899999999
Q ss_pred CCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHH
Q 001531 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1058)
Q Consensus 790 s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1058)
++||+++.+ ++-.+|++++++++...+-.. ....+..-+ + ..+|.. ..|-+-+.
T Consensus 193 S~tK~l~G~---~d~~gG~v~~~~~~~~~l~~~-------------~~~~G~~l~-p-------~~a~~~--~rgl~tl~ 246 (377)
T TIGR01324 193 AGTKYLVGH---SDIMIGTVVANARTWDQLREH-------------SYLMGQMVD-A-------DDAYTT--LRGLRTLG 246 (377)
T ss_pred cCceeccCC---CCceEEEEEeCHHHHHHHHHH-------------HHHhCCCCC-H-------HHHHHH--HhhhhhHH
Confidence 999999522 223468888876543322100 000111111 1 123333 33444555
Q ss_pred HHHHHHHHHHHHHHHHHhcc---CCeeecc
Q 001531 870 EASKIAILNANYMAKRLEKH---YPILFRG 896 (1058)
Q Consensus 870 ~~a~~~~~~a~yL~~~L~~~---~~v~~~g 896 (1058)
.+.++..++|..+++.|++. -.+.|++
T Consensus 247 ~R~~~~~~~a~~la~~L~~~p~v~~v~yp~ 276 (377)
T TIGR01324 247 VRLKQHQESSLAIAKWLSEQPEVARVLHPA 276 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcCEEECCC
Confidence 56778888999999999875 2445554
No 390
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.56 E-value=5.8e-13 Score=153.98 Aligned_cols=283 Identities=12% Similarity=0.082 Sum_probs=172.5
Q ss_pred HHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCC-C
Q 001531 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK-G 713 (1058)
Q Consensus 635 ~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~-g 713 (1058)
.++++.+++.+|.+...+..++|++. ++.++++.+ . +++ ++++.+.+..+...+++.|.+++.++.+++ +
T Consensus 58 ~~lr~~ia~~~~~~~~~i~it~Ga~~--~l~~~~~~l--~----~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~ 128 (356)
T PRK08056 58 RHLHQALARHHQVPASWILAGNGETE--SIFAVVSGL--K----PRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADG 128 (356)
T ss_pred HHHHHHHHHHhCcChhhEEECCCHHH--HHHHHHHHh--C----CCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccC
Confidence 57888899999988766666667642 333344433 1 234 455544333344457889999999998754 3
Q ss_pred -CCCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCcc-cccC--cCCC-CccCCc
Q 001531 714 -NINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG--LTSP-GYIGAD 785 (1058)
Q Consensus 714 -~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~-al~g--l~~p-g~~GaD 785 (1058)
.+| +++.+.+. +++++|++++|+ .+|.+- +.+++|+++|+++|+++++|+++.- ...+ ...+ ....-+
T Consensus 129 ~~~~-~~~~~~~~---~~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 204 (356)
T PRK08056 129 WQLT-DAILEALT---PDLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHL 204 (356)
T ss_pred CCcc-HHHHHhcc---CCCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCE
Confidence 445 45555564 788899999994 789875 1388999999999999999998521 0011 0011 123456
Q ss_pred EEEeCCccccccCCCCCCCceeEEEEe-CCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHc
Q 001531 786 VCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1058)
Q Consensus 786 i~~~s~hKtf~~P~g~GGPg~G~i~~~-~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1058)
+++.|++|+|++| |.++|+++++ +++...+-.. . ...+.+. ....++...+ -+
T Consensus 205 i~~~S~SK~~~~~----G~RiG~~v~~~~~~~~~l~~~--------------~--~~~~~~~----~~~~~a~~~l--~~ 258 (356)
T PRK08056 205 WVLRSLTKFYAIP----GLRLGYLVNSDDAAVARMRRQ--------------Q--MPWSINA----FAALAGEVIL--QD 258 (356)
T ss_pred EEEEechhhccCc----chhheeeecCCHHHHHHHHHh--------------C--CCCchhH----HHHHHHHHHh--CC
Confidence 7888999999755 7889999875 3443322100 0 0111111 1111111111 12
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccC-CCCC--C
Q 001531 865 SKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWP--V 941 (1058)
Q Consensus 865 ~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~-~~~p--~ 941 (1058)
.+-+++..+....+++++.+.|+++..+.+..+.+ .+ ++++++ .+..++.+.|.++||.+.. ..|+ .
T Consensus 259 ~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~-~~--~~~~~~-------~~~~~~~~~l~~~gI~v~~~~~f~~~~ 328 (356)
T PRK08056 259 RAYQQATWQWLAEEGARFYQALCALPLLTVWPGRA-NY--LFLRCE-------RPDIDLQRALLTQRILIRSCANYPGLD 328 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCCC-cE--EEEEcC-------CChHHHHHHHHHCCeEEEECCCCCCCC
Confidence 23334444555677888888887642221212222 22 456653 2357899999999998643 3343 2
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001531 942 PGTLMIEPTESESKEELDRYCDALISIR 969 (1058)
Q Consensus 942 ~~~Lris~te~~t~eeid~fi~aL~~i~ 969 (1058)
++.+||++. +.++.++|+++|+++.
T Consensus 329 ~~~iRis~~---~~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 329 SRYYRVAIR---SAAENERLLAALRNVL 353 (356)
T ss_pred CCEEEEEEc---CHHHHHHHHHHHHHHH
Confidence 468999984 6789999999998763
No 391
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.56 E-value=1.2e-12 Score=154.64 Aligned_cols=270 Identities=16% Similarity=0.133 Sum_probs=170.7
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHH----HHHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa----~a~~~G~~vv~V~~ 709 (1058)
..++++.++++.|.+.+ +..++|.++..+++.++. +++++||++...|+.... .+...|++++.++.
T Consensus 65 ~~~le~~lA~l~g~~~a-l~~~SG~~Ai~~al~all--------~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (427)
T PRK05994 65 NAVLEERVAALEGGTAA-LAVASGHAAQFLVFHTLL--------QPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA 135 (427)
T ss_pred HHHHHHHHHHHhCCCcE-EEEcCHHHHHHHHHHHHh--------CCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC
Confidence 34788999999998874 566788777654444331 256789998776654332 25668999999986
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
.|+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++.... ...|-++|+|+++
T Consensus 136 -----~d~~~l~~ai~---~~tklV~vesp~NptG~v~-dl~~I~~la~~~gi~livD~a~a~~~--~~~pl~~gaDivv 204 (427)
T PRK05994 136 -----DDPASFERAIT---PRTKAIFIESIANPGGTVT-DIAAIAEVAHRAGLPLIVDNTLASPY--LIRPIEHGADIVV 204 (427)
T ss_pred -----CCHHHHHHhcC---cCCeEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCccccc--cCCccccCCcEEE
Confidence 38999999996 78999999998 5789887 79999999999999999999875332 4567789999999
Q ss_pred eCCccccccCCCCCCCceeEEEEeCCCCCCCCCCC--cccCCCC-----------C-------CCC-CCCCCCCCCccch
Q 001531 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHP--VVSTGGI-----------P-------APE-KSQPLGTIAAAPW 847 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~--vg~~~d~-----------g-------~~~-~~~~t~~i~sa~~ 847 (1058)
.++||+++.+ ||+-+|+++.... ..+.+... ...+.+. + .+. ..+..+...+ +
T Consensus 205 ~S~tK~lgg~---~~~~gG~v~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~-~- 278 (427)
T PRK05994 205 HSLTKFLGGH---GNSMGGIIVDGGT-FDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAIS-P- 278 (427)
T ss_pred EcCccccCCC---CCcEEEEEEeCCc-cccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCC-H-
Confidence 9999998522 3344555543221 11111100 0000000 0 000 0000111110 0
Q ss_pred hhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCC---eeeccCCCccceEEEEecccccccCCCCHHHHH
Q 001531 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYP---ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA 924 (1058)
Q Consensus 848 g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~---v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~ 924 (1058)
--+++...|-+-+..+.++..++|.++++.|+++.. |.|+|- + .-...+++
T Consensus 279 --------~~A~l~~~~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l------------~------~~~~~~~~ 332 (427)
T PRK05994 279 --------FNAFLILTGIETLPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGL------------P------DDPYHALA 332 (427)
T ss_pred --------HHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCC------------C------CCccHHHH
Confidence 123455556666777788888999999999998633 333321 0 11235666
Q ss_pred HHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q 001531 925 KRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALI 966 (1058)
Q Consensus 925 k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~ 966 (1058)
++....|+ .+.+-|.+. .++++.++|++.|+
T Consensus 333 ~~~~~~g~---------g~~~sf~l~--~~~~~~~~~~~~l~ 363 (427)
T PRK05994 333 QKYSPKGA---------GAVFTFGLK--GGYEAGVKLVSSLK 363 (427)
T ss_pred HHhcCCCc---------eEEEEEEec--CCHHHHHHHHHhCC
Confidence 66543341 233444443 35778889998886
No 392
>PRK04311 selenocysteine synthase; Provisional
Probab=99.56 E-value=6e-13 Score=157.52 Aligned_cols=291 Identities=21% Similarity=0.252 Sum_probs=177.4
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCC----c--cHHHHHhCCcEEEEE
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHG----T--NPATAAMCGMKIVSV 707 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg----~--~pa~a~~~G~~vv~V 707 (1058)
..++++.+++++|.+.+ +..++|+.|.. +++... .++++||+++..|. + .|..+...|++++++
T Consensus 129 ~~~~e~~lA~l~Gae~a-~vv~sgtaAl~---l~l~~l------~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v 198 (464)
T PRK04311 129 DRALAALLCALTGAEDA-LVVNNNAAAVL---LALNAL------AAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEV 198 (464)
T ss_pred HHHHHHHHHHHhCCCeE-EEECCHHHHHH---HHHHHh------CCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEE
Confidence 55788999999999865 45666765543 333322 24678999875442 1 233466789999999
Q ss_pred cCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCC---cccc-cccHHHHHHHHHHcCCEEEEeccCcc-----ccc--C-
Q 001531 708 GTDAKGNINIEELRKAAEANRDNLSTLMVTYPST---HGVY-EEGIDEICKIIHDNGGQVYMDGANMN-----AQV--G- 775 (1058)
Q Consensus 708 ~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~---~G~i-~~dI~eI~~lah~~g~lv~vD~a~~~-----al~--g- 775 (1058)
+.+ +..++++++++|+ ++|++|++.+++. .|.. ..|+++|+++||++|+++++|++... .++ .
T Consensus 199 ~~~--~~t~~~dle~aI~---~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~ 273 (464)
T PRK04311 199 GTT--NRTHLRDYEQAIN---ENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDE 273 (464)
T ss_pred CCC--CCCCHHHHHHhcC---ccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCC
Confidence 763 4578999999997 7899999998853 4532 13799999999999999999984210 010 0
Q ss_pred --cCCCCccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHH
Q 001531 776 --LTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (1058)
Q Consensus 776 --l~~pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~ 853 (1058)
+..|.++|+|++++|+||+| |||..|++++++++.+++..+.++.. . .+. +..+.+
T Consensus 274 p~~~~~l~~GaDiv~fSg~K~L------gGp~~G~i~g~~~li~~l~~~~~~r~-------l-----r~d----k~~l~~ 331 (464)
T PRK04311 274 PTVQELLAAGVDLVTFSGDKLL------GGPQAGIIVGKKELIARLKKHPLKRA-------L-----RVD----KLTLAA 331 (464)
T ss_pred CchhhHHhcCCcEEEecCcccc------cCCceEEEEEcHHHHHHHhhchhHHH-------H-----hcc----hHHHHH
Confidence 11234589999999999998 57889999999887766543222110 0 000 000111
Q ss_pred HHH--HHHHH----HHchhhH---HHHHHHHHHHHHHHHHHHhccC------Ceeec----c---CCCccceEEEEeccc
Q 001531 854 PIS--YTYIA----MMGSKGL---TEASKIAILNANYMAKRLEKHY------PILFR----G---VNGTVAHEFIVDLRG 911 (1058)
Q Consensus 854 ~~a--~a~l~----~lG~eGl---~~~a~~~~~~a~yL~~~L~~~~------~v~~~----g---~~~~~~~e~vv~~~~ 911 (1058)
..+ -.|+. ..+-.++ ....++..++|+.+++.|++.. .+... | ..+.....+.+.+.+
T Consensus 332 l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~ 411 (464)
T PRK04311 332 LEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTP 411 (464)
T ss_pred HHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeC
Confidence 111 11111 1111121 1223555678889999997642 22211 1 001112234444432
Q ss_pred ccccCCCCHHHHHHHHHHCC--ccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001531 912 LKNTAGIEPEDVAKRLMDYG--FHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1058)
Q Consensus 912 ~~~~~g~~~~~v~k~L~~~G--i~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~ 970 (1058)
.+.+..++.++|.+.. |++. +. .+.+.+-+- +...+|++.+++.|.+++.
T Consensus 412 ----~~~~~~~l~~~lr~~~~~i~~r-~~---~~~~~ld~r-~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 412 ----KDRSLEALAARLRLLPPPVIGR-IE---DGRLLLDLR-TLEEEDEERLAAALLEALN 463 (464)
T ss_pred ----CCCCHHHHHHHHhcCCCCEEEE-EE---CCEEEEEeC-cCCHHHHHHHHHHHHHHhh
Confidence 2467899999998633 3332 21 466666554 3457899999999988753
No 393
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.56 E-value=7.6e-13 Score=154.11 Aligned_cols=305 Identities=14% Similarity=0.063 Sum_probs=179.2
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCC-
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 712 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~- 712 (1058)
..++++++++.+|.+.+ +..++|++|... +++.. +.+++++|++|...|......+...|++++.+++|++
T Consensus 33 ~~~~e~~la~~~g~~~~-v~~~sgt~al~~---~l~~~----~~~~Gd~Viv~~~t~~~~~~~~~~~G~~~v~~d~d~~~ 104 (375)
T PRK11706 33 TRRCQQWLEQRFGSAKV-LLTPSCTAALEM---AALLL----DIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDT 104 (375)
T ss_pred HHHHHHHHHHHhCCCeE-EEECCHHHHHHH---HHHHh----CCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCc
Confidence 45777889999998764 445566655422 22221 1235789999988776666667889999999999877
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCccccc-CcCCCCccCCcEEEeCC
Q 001531 713 GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV-GLTSPGYIGADVCHLNL 791 (1058)
Q Consensus 713 g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~-gl~~pg~~GaDi~~~s~ 791 (1058)
+.+|+++|+++++ +++++|+++++ +|... |+++|.++|+++|++++.|+++..+.. .-...|.+ .|+.++|+
T Consensus 105 ~~~d~~~le~~i~---~~tk~i~~~~~--~G~~~-~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g~~-~~~~~~Sf 177 (375)
T PRK11706 105 MNIDETLIEAAIT---PKTRAIVPVHY--AGVAC-EMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTI-GHIGCFSF 177 (375)
T ss_pred CCcCHHHHHHhcC---CCCeEEEEeCC--CCCcc-CHHHHHHHHHHcCCEEEEECccccccccCCeeeecC-cCEEEEeC
Confidence 4799999999997 68999998864 68776 799999999999999999999753321 11112333 48888888
Q ss_pred c--cccccCCCCCCCceeEEEEeCCCCCCCCC-CCcccCCC--C-CCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHch
Q 001531 792 H--KTFCIPHGGGGPGMGPIGVKKHLAPFLPS-HPVVSTGG--I-PAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1058)
Q Consensus 792 h--Ktf~~P~g~GGPg~G~i~~~~~l~~~lpg-~~vg~~~d--~-g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1058)
| |.++. | -|++++..++++..++.. +..|...+ . +.. .......+..+..-+...++...+.+..
T Consensus 178 ~~~K~l~~--g---~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~aa~~~~ql~~--- 248 (375)
T PRK11706 178 HETKNYTA--G---EGGALLINDPALIERAEIIREKGTNRSQFFRGQV-DKYTWVDIGSSYLPSELQAAYLWAQLEA--- 248 (375)
T ss_pred CCCccccc--c---CCeEEEECCHHHHHHHHHHHHcCCCcchhhccCC-CcceeeecccccCcCHHHHHHHHHHHHH---
Confidence 8 87742 2 233444434444432210 00000000 0 000 0000000111111112222222222222
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccC--C-eeec-cCCC--ccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCC-
Q 001531 866 KGLTEASKIAILNANYMAKRLEKHY--P-ILFR-GVNG--TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS- 938 (1058)
Q Consensus 866 eGl~~~a~~~~~~a~yL~~~L~~~~--~-v~~~-g~~~--~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~- 938 (1058)
+.+..++..++++++.+.|+++- . +.++ .+.+ ...|.+.+.++ .+.+.+++.+.|.++||.+...+
T Consensus 249 --l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~r~~l~~~L~~~gI~~~~~~~ 321 (375)
T PRK11706 249 --ADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLR-----DLEDRSALINFLKEAGIMAVFHYI 321 (375)
T ss_pred --HHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEEC-----CcCCHHHHHHHHHHCCCCccccCC
Confidence 44455555677778888887641 1 2211 1111 12334455443 13467899999999999753111
Q ss_pred -----------------CCC-----CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001531 939 -----------------WPV-----PGTLMIEPTESESKEELDRYCDALISIR 969 (1058)
Q Consensus 939 -----------------~p~-----~~~Lris~te~~t~eeid~fi~aL~~i~ 969 (1058)
+|. ...|.+-.....|++|+++.+++++++.
T Consensus 322 p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 322 PLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred ccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence 121 2346665666778999999999998753
No 394
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.55 E-value=4.9e-13 Score=149.41 Aligned_cols=298 Identities=18% Similarity=0.132 Sum_probs=190.7
Q ss_pred HHHHHHHHHHhcCccCcCcccccccccccCCcccccccc-----cccccccccCCCCchhhhhcHHHHHHHHHHHHHHHh
Q 001531 571 HELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMP-----VTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTIT 645 (1058)
Q Consensus 571 ~e~~r~~~~l~~~~~~~~~~~i~lGs~t~~~~~~~~~~~-----~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~ 645 (1058)
..++-++.+++.+.... .+||-|.+..++...... +..+.+..|++ .-|..++..-|.+++++++
T Consensus 17 ~~vw~e~~~la~e~~~~----~~LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~------~~G~p~L~~aL~k~~se~~ 86 (420)
T KOG0257|consen 17 PYVWTEINRLAAEHKVP----NPLGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTR------GYGLPQLRKALAKAYSEFY 86 (420)
T ss_pred CcHHHHHHHHHHhcCCC----CcccCCCCCCCCcHHHHHHHHHHhccchhccccc------cCCchHHHHHHHHHHHHHh
Confidence 36777778787776432 237877766655432211 22223333443 3467778888889999988
Q ss_pred CCCc---eeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCC--------CCCC
Q 001531 646 GFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD--------AKGN 714 (1058)
Q Consensus 646 G~~~---~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d--------~~g~ 714 (1058)
|... ..+..++||.. +...++..+. +++|+|+|.++++.++-....|+|..++.|+.. .+..
T Consensus 87 ~~~~~~~~eVlVT~GA~~--ai~~~~~~l~-----~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~ 159 (420)
T KOG0257|consen 87 GGLLDPDDEVLVTAGANE--AISSALLGLL-----NPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWT 159 (420)
T ss_pred ccccCCcccEEEecCchH--HHHHHHHHHc-----CCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCcccc
Confidence 7542 24666677642 3333333322 367899999887666666688999999999876 3478
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--ccHHHHHHHHHHcCCEEEEeccCc-ccccC------cCCCCccCC
Q 001531 715 INIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANM-NAQVG------LTSPGYIGA 784 (1058)
Q Consensus 715 iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~-~al~g------l~~pg~~Ga 784 (1058)
+|.++|+.+++ ++|++|++.+| |.+|-+- +.+++|+++|++||.+++.|+++- ....+ ...||.+..
T Consensus 160 ~D~~~le~~~t---~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~er 236 (420)
T KOG0257|consen 160 LDPEELESKIT---EKTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYER 236 (420)
T ss_pred CChHHHHhhcc---CCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhhe
Confidence 99999999998 89999999999 5788874 469999999999999999999862 11111 122777777
Q ss_pred cEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHc
Q 001531 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1058)
Q Consensus 785 Di~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1058)
-|-++|+.|+|+ +-|+.+|+++.++++...+. .+- ....-.+|+ +. |.+.+++-..-+.+..
T Consensus 237 titvgS~gKtf~----~TGWrlGW~igp~~L~~~~~--~vh----------~~~~~~~~T-p~-q~A~a~a~~~~~~~~~ 298 (420)
T KOG0257|consen 237 TITVGSFGKTFG----VTGWRLGWAIGPKHLYSALF--PVH----------QNFVFTCPT-PI-QEASAAAFALELACLQ 298 (420)
T ss_pred EEEeccccceee----eeeeeeeeeechHHhhhhHH--HHh----------hccccccCc-HH-HHHHHHHHhhhhhccC
Confidence 788899999996 45899999999888775432 110 001112232 22 2221111011111222
Q ss_pred hhh--HHH-HHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecc
Q 001531 865 SKG--LTE-ASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLR 910 (1058)
Q Consensus 865 ~eG--l~~-~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~ 910 (1058)
++| +.+ +.+...++++.|++.|.++ +++ .+++|..+ +++|+.
T Consensus 299 p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v--~~p~gayy--l~adfs 344 (420)
T KOG0257|consen 299 PGGSYFITELVKEYKEKRDILAKALEELGLKV--TGPEGAYY--LWADFS 344 (420)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHhcCCcc--ccCCCceE--EEEecc
Confidence 333 233 5566678899999999986 444 34445443 456665
No 395
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.55 E-value=2.1e-13 Score=159.73 Aligned_cols=276 Identities=14% Similarity=0.137 Sum_probs=187.9
Q ss_pred HHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---
Q 001531 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--- 288 (1058)
Q Consensus 212 ~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~--- 288 (1058)
.+.|.|+..|+++|.+.+.+ +.+|.|+++.+|.+|+. ++||+||+++++|.|+...+-. .|...+++.+
T Consensus 71 ~i~eAqe~aA~~fgAd~tyF-vvNGTS~ank~vi~a~~---~~GD~VLvdRN~HKSi~~glil----aGa~Pvyl~p~~n 142 (557)
T COG1982 71 PIKEAQELAARVFGADHTYF-VVNGTSTANKAVINAVL---TPGDKVLVDRNCHKSIHHGLIL----AGATPVYLEPSRN 142 (557)
T ss_pred cHHHHHHHHHHHhCCCceEE-EECCccHHHHHHHHhhc---CCCCEEEecCCccHHHHHHHHH----cCCceEEecCCCC
Confidence 67899999999999998655 67888999999999874 3899999999999999998532 3666666433
Q ss_pred -----------hhhhc--c-CCCE-eEEEEEcCCCceeeccHHHHHHHHHhcCcEEEEEeccccc-----cCCCC-CCcc
Q 001531 289 -----------KDIDY--K-SGDV-CGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLAL-----TILKP-PGEL 347 (1058)
Q Consensus 289 -----------~~l~~--l-~~~t-~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~sl-----g~l~~-p~~~ 347 (1058)
+.+++ + .++. +++++|+|+++|++.|+++|.+.+|..++++.|+ +++.. +.+.. ..+.
T Consensus 143 p~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~d-eah~~~~~~~~~l~~~~~~~ 221 (557)
T COG1982 143 PLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYD-EAHPAHFDFSPMLPESALNG 221 (557)
T ss_pred ccccccCCCCHHHHHHHHHhChhhheeEEEecCccceEeecHHHHHHHHhhcCceEEhh-hcCcccccccccCcchhhhc
Confidence 23443 2 3566 8999999999999999999999999999999992 32221 22222 2348
Q ss_pred cceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHH
Q 001531 348 GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL 426 (1058)
Q Consensus 348 GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l 426 (1058)
|+|+++.|. |.++ .+. .+.++++++. +.+. .++ -+.+|.+ .-|+++.
T Consensus 222 ~~~~~tqS~HK~l~-alS----QaS~iHv~~~--~~~~-------~~r-~nea~~~-----------------h~STSPs 269 (557)
T COG1982 222 GADFVTQSTHKLLA-ALS----QASMIHVKDG--RAVN-------HER-FNEALMM-----------------HQSTSPS 269 (557)
T ss_pred CceEEEechhhhhh-hhh----hhHHHhhCCC--ccCC-------HHH-HHHHHHH-----------------HccCCch
Confidence 999999999 5453 222 4466666653 2221 000 0011111 1244667
Q ss_pred HHHHHHHH--HHHhCcccHHH---HHHHHHHHHHHHHHHHhcCCCeEEcCCC-------------------CccE--EEE
Q 001531 427 LANMAAMY--AVYHGPEGLKT---IAQRVHGLAGTFALGLKKLGTVEVQGLP-------------------FFDT--VKV 480 (1058)
Q Consensus 427 ~a~~Aa~y--l~~~g~~Gl~~---ia~~~~~~a~~l~~~L~~~G~~~l~~~~-------------------~~~~--v~i 480 (1058)
+.++|++- ..+.+..|-+- ......+..+++++..+++++|.++.+. ++|+ ++|
T Consensus 270 Y~l~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti 349 (557)
T COG1982 270 YPLMASLDVARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTI 349 (557)
T ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEE
Confidence 77787773 23444555332 2455567777888888777668776432 1343 556
Q ss_pred ecCC----HHHHHHHHHHcCceeeeccCC--eEEEEeccCCCHHHHHHHHHHHh
Q 001531 481 KCAD----AHAIASAAYKIEMNLRVVDSN--TVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 481 ~~~~----~~~l~~~L~~~GI~~~~~~~~--~lris~~~~~t~edid~ll~al~ 528 (1058)
.+++ +..+.+.|+++||........ .+.+++.+..+..+++.|++.+.
T Consensus 350 ~tp~~Gipg~~v~~~L~e~gii~e~~~d~~~lll~~~~~gk~~~lv~~L~~f~r 403 (557)
T COG1982 350 TTPEFGIPGAIVAKYLREHGIIPEETGDYSNLLLFSPGIGKWQTLVDRLLEFKR 403 (557)
T ss_pred ecCCCCCcHHHHHHHHHHcCCeeeecCCceeeEEeeeccchHHHHHHHHHHHHH
Confidence 5543 789999999999988776543 35555555677788888888886
No 396
>PRK06149 hypothetical protein; Provisional
Probab=99.55 E-value=9e-13 Score=169.99 Aligned_cols=329 Identities=21% Similarity=0.289 Sum_probs=200.2
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHh--CCCceeeecCchHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTIT--GFDSFSLQPNAGAAGEYAGLMVIR 669 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~--G~~~~~l~~~sGa~ge~a~llair 669 (1058)
..+|++.+++..++..+. ....+. ..+. .+...++.++|++++ +++. .++.+||++++++++..+|
T Consensus 595 ~~lGh~hp~v~~Ai~~q~-~~l~~~--~~~~--------~~~~~elae~L~~~~p~~~~~-v~f~~SGsEA~e~AlklAr 662 (972)
T PRK06149 595 TVLGHGHPRLAAAAARQW-SLLNTN--SRFH--------YAAVAEFSERLAALAPDGLDT-VFLVNSGSEANDLAIRLAW 662 (972)
T ss_pred cccCCCCHHHHHHHHHHH-Hhcccc--cccc--------CHHHHHHHHHHHHhCCCCcCE-EEEeCCchHHHHHHHHHHH
Confidence 357888877776665552 211111 0111 123558889999998 4554 4668899999988888888
Q ss_pred HHHHHcCCCCCCEEEEcCCCCCccHHHHHhCC-------c------EEEEEcCCCC--C---CCC-----HHHHHHHHH-
Q 001531 670 AYHKARGDHHRNVCIIPVSAHGTNPATAAMCG-------M------KIVSVGTDAK--G---NIN-----IEELRKAAE- 725 (1058)
Q Consensus 670 ~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G-------~------~vv~V~~d~~--g---~iD-----~e~L~~~i~- 725 (1058)
.|. | +++.|.+..++||..-.+....+ . -+..++.... + ..| .+++++.++
T Consensus 663 ~~t---g--r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~ 737 (972)
T PRK06149 663 AAS---G--RRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEE 737 (972)
T ss_pred Hhc---C--CCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHH
Confidence 762 2 33444456789987644321111 0 1223332111 1 112 345555553
Q ss_pred --hcCCCeEEEEEEcC-CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCc-------cC--CcEEEeC
Q 001531 726 --ANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY-------IG--ADVCHLN 790 (1058)
Q Consensus 726 --~~~~~taaV~vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~-------~G--aDi~~~s 790 (1058)
++++++++|+++.- +..|.+.+ .+++|.++|++||+++|+|+++ .|+.+.|+ +| +||+++
T Consensus 738 ~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~----tGfGRtG~~~~a~e~~gv~PDivt~- 812 (972)
T PRK06149 738 LDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQ----VGYGRLGHYFWGFEQQGVVPDIITM- 812 (972)
T ss_pred HhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeeh----hcCCccCccchhhhhcCCCCCEEEe-
Confidence 24567888887642 45576651 3999999999999999999984 45666664 23 688865
Q ss_pred CccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHH
Q 001531 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1058)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1058)
.|.+ |+|-| +|.+++++++++.+... + .+.+++.|++..++++.+.|..+-++++.+
T Consensus 813 -gK~l----g~G~P-l~av~~~~~i~~~~~~~--~---------------~~~sT~~gnP~~~aaala~L~~i~~e~l~~ 869 (972)
T PRK06149 813 -AKGM----GNGHP-LGAVITRREIAEALEAE--G---------------YFFSSTGGSPVSCRIGMAVLDVLREEKLQE 869 (972)
T ss_pred -cccc----cCCee-eEEEEEcHHHHhhhccC--C---------------cccCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 4655 44434 68888888877655211 0 001113467777888888888887776554
Q ss_pred HHHHHHHHHHHHHHHHhcc---CCee--eccCCCccc-eEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCE
Q 001531 871 ASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVA-HEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 944 (1058)
Q Consensus 871 ~a~~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~~-~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~ 944 (1058)
. +....+||+++|+++ ++++ +.|. |.+. -+++-+..+ +.........+.++|.++|+.+.... +..+.
T Consensus 870 ~---~~~~G~~l~~~L~~l~~~~~~i~~vrG~-Gl~~gvel~~~~~~-~~~~~~~~~~i~~~l~~~Gvl~~~~g-~~~~v 943 (972)
T PRK06149 870 N---ARRVGDHLKARLEALADRHPLIGAVHGM-GLYLGVELVRDRQT-LEPATEETAAICDRLLELGVIMQPTG-DHLNI 943 (972)
T ss_pred H---HHHHHHHHHHHHHHHHHhCCCeEEEeec-ceEEEEEEecCccc-CCCChHHHHHHHHHHHhCCeEEeecC-CCCCE
Confidence 3 345667888888764 3432 3332 3221 122111110 00000124578899999999875432 12478
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 945 LMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 945 Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
|+|.|+...|++|||.++++|.+++.+
T Consensus 944 l~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 944 LKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred EEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998764
No 397
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.55 E-value=9.2e-13 Score=154.41 Aligned_cols=296 Identities=13% Similarity=0.093 Sum_probs=180.1
Q ss_pred hhcHHHHHHHHHHHHHHHhCC----Cce-eeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCC
Q 001531 627 AQGYQEMFNNLGEWLCTITGF----DSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCG 701 (1058)
Q Consensus 627 ~qG~~~~~~el~~~lael~G~----~~~-~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G 701 (1058)
.+|..++...+.+++.+.+|. +.. .+..++|++. +..++++.+. .+| ...+|++|.+.+..+...+.+.|
T Consensus 63 ~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~--al~~~~~~l~-~~g--d~~~vlv~~P~y~~~~~~~~~~g 137 (393)
T TIGR03538 63 TKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTRE--ALFAFAQAVI-NPG--QAPLVVMPNPFYQIYEGAALLAG 137 (393)
T ss_pred CCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHH--HHHHHHHHHc-CCC--CcceEEecCCCCcchHHHHHhcC
Confidence 457666666666777666554 332 4666666653 3333444432 222 12358999887766666788999
Q ss_pred cEEEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--ccHHHHHHHHHHcCCEEEEeccCcccc-cC
Q 001531 702 MKIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG 775 (1058)
Q Consensus 702 ~~vv~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~al-~g 775 (1058)
.+++.++++++ ..+|++++++++. +++++|++++| |.+|.+- +.+++|+++|+++|+++++|+++..-. .+
T Consensus 138 ~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~ 214 (393)
T TIGR03538 138 AEPYFLNCTAENGFLPDFDAVPESVW---RRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDE 214 (393)
T ss_pred CeEEEeeccccCCCCCCHHHHHHHHh---hcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCC
Confidence 99999999754 3689999999886 58899999999 4788875 258999999999999999999864211 11
Q ss_pred -cCCC------CccCCc-----EEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCC
Q 001531 776 -LTSP------GYIGAD-----VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIA 843 (1058)
Q Consensus 776 -l~~p------g~~GaD-----i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~ 843 (1058)
...+ ...+.| |++.++.|.|+. .|.++|++.+++++...+-. . +.....+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~----~GlRvG~~i~~~~l~~~~~~-~-------------~~~~~~~ 276 (393)
T TIGR03538 215 GNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNL----PGLRSGFVAGDAEILKAFLR-Y-------------RTYHGCA 276 (393)
T ss_pred CCCCcCHHHhcccccccccccEEEEecchhhcCC----cccceEEEecCHHHHHHHHH-H-------------HHhhccC
Confidence 0011 112211 667778887754 47899999988766543310 0 0000111
Q ss_pred ccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHH
Q 001531 844 AAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDV 923 (1058)
Q Consensus 844 sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v 923 (1058)
.+...+.. +.+.+ ...+.+++..+...++.+.+.+.|++.+.+. .+++..+ ++++++ .+..++
T Consensus 277 ~~~~~q~~----~~~~l--~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~--~p~gg~f--~~~~~~-------~~~~~~ 339 (393)
T TIGR03538 277 MPIPTQLA----SIAAW--NDEQHVRENRALYREKFAAVLEILGQVLDLE--LPDAGFY--LWPKVP-------GDDEAF 339 (393)
T ss_pred cCHHHHHH----HHHHh--cChHHHHHHHHHHHHHHHHHHHHHHhhCccc--CCCeeEE--EEEECC-------CCHHHH
Confidence 11111211 11111 1233455555556677778888887754432 2223222 456654 245788
Q ss_pred HHHHH-HCCcccc-CCCC--------CCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 001531 924 AKRLM-DYGFHGP-TMSW--------PVPGTLMIEPTESESKEELDRYCDALIS 967 (1058)
Q Consensus 924 ~k~L~-~~Gi~~~-~~~~--------p~~~~Lris~te~~t~eeid~fi~aL~~ 967 (1058)
+++|. ++|+.+. ...| +..+.+||++.. +.++++..++.|++
T Consensus 340 ~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~--~~~~l~~~l~~l~~ 391 (393)
T TIGR03538 340 ARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA--PLEECVEAAERIRS 391 (393)
T ss_pred HHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC--CHHHHHHHHHHHHH
Confidence 88876 6899753 2222 124789999874 47777777777764
No 398
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.55 E-value=2.4e-12 Score=150.87 Aligned_cols=288 Identities=24% Similarity=0.323 Sum_probs=178.3
Q ss_pred HHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEE-cCCCCCccHHHHHhCCcEEEE---Ec
Q 001531 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGMKIVS---VG 708 (1058)
Q Consensus 633 ~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vli-p~saHg~~pa~a~~~G~~vv~---V~ 708 (1058)
...++.++++++.|.+.+ +..++|+++..+++.+++.+....+. .+++|++ ..++||.......+.+..... .+
T Consensus 82 ~~~~la~~l~~~~~~~~v-~~~~gg~eA~~~al~~a~~~~~~~~~-~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 159 (396)
T PRK02627 82 PQEELAEKLVELSGMDKV-FFCNSGAEANEAAIKLARKYGHKKGI-EKPEIITAENSFHGRTLATLSATGQPKYQEGFEP 159 (396)
T ss_pred HHHHHHHHHHhhcCCCEE-EECCCcHHHHHHHHHHHHHHhcccCC-CCCeEEEECCCcCcccHHHHHhcCCccccccCCC
Confidence 455788999999888654 56778888887777776665322221 1255665 457788766654444332211 11
Q ss_pred CCCCC----CCCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc---ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCC
Q 001531 709 TDAKG----NINIEELRKAAEANRDNLSTLMVTYPS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 780 (1058)
Q Consensus 709 ~d~~g----~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg 780 (1058)
...+- ..|+++|++++. +++++|+++.++ ..|+.. ..+++|.++|+++|+++++|+++. ++.+.|
T Consensus 160 ~~~~~~~~~~~d~~~l~~~i~---~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~----g~g~~g 232 (396)
T PRK02627 160 LVEGFIYVPFNDIEALKAAIT---DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQT----GMGRTG 232 (396)
T ss_pred CCCCceEeCCCCHHHHHHhcC---CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhc----CCCccC
Confidence 11110 128999999995 789999998764 456332 258999999999999999999864 222222
Q ss_pred ------ccC--CcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHH
Q 001531 781 ------YIG--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1058)
Q Consensus 781 ------~~G--aDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~ 852 (1058)
..| .|++++ .|.++ +|..+|++.+++++.+.+-... .....+ ++...
T Consensus 233 ~~~~~~~~~~~pdi~t~--sK~~~-----~G~rig~~~~~~~~~~~~~~~~--------------~~~t~~----~~~~~ 287 (396)
T PRK02627 233 KLFAYQHYGIEPDIMTL--AKGLG-----GGVPIGAVLAKEKVADVFTPGD--------------HGSTFG----GNPLA 287 (396)
T ss_pred ceeeehhcCCCCCEEEE--cchhh-----CCcccEEEEEcHHHHhccCCCC--------------CCCCCC----CCHHH
Confidence 223 566654 47764 4567999999887665542100 001112 23334
Q ss_pred HHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCccceEEEEecccccccCCCCHHHHHHHH
Q 001531 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL 927 (1058)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L 927 (1058)
++++.+.+..+..+++. ++..++.++++++|++. ++.. ..+ .+. -+.+.+. .+..++.++|
T Consensus 288 ~~aa~~~l~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~---~~~i~~~-------~~~~~~~~~l 353 (396)
T PRK02627 288 CAAALAVIEIIEEEGLL---ENAAEVGEYLRAKLRELLEKYPGIKEVRG-LGL---MIGIELD-------RPAAEIVKKA 353 (396)
T ss_pred HHHHHHHHHHHhhccHH---HHHHHHHHHHHHHHHHHHHhCCCeeeecc-CcE---EEEEEec-------CcHHHHHHHH
Confidence 44455556555444433 33445566677777653 2221 111 121 1334432 2568899999
Q ss_pred HHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 928 MDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 928 ~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
.++|+.+.... .+.+||+|+...++++++++++.|++++++
T Consensus 354 ~~~Gv~v~~~~---~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~ 394 (396)
T PRK02627 354 LEKGLLINVTG---DNVLRLLPPLIISKEEIDEAVDRLEEVLKE 394 (396)
T ss_pred HHCCeEEeecC---CCEEEEECCcccCHHHHHHHHHHHHHHHHh
Confidence 99999874322 378999999888999999999999988754
No 399
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.55 E-value=9.6e-13 Score=152.68 Aligned_cols=285 Identities=16% Similarity=0.159 Sum_probs=177.6
Q ss_pred HHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCC-CEEEEcCCCCCccHHHHHhCCcEEEEEcCCC--
Q 001531 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHR-NVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-- 711 (1058)
Q Consensus 635 ~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r-~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~-- 711 (1058)
.++++.+++.+|++..++..++|++. ++.++++.+. .++ ++|+++...++.+...+++.|.+++.+|.+.
T Consensus 62 ~~lr~~ia~~~~~~~~~I~~t~G~~~--~l~~~~~~~~-----~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~ 134 (364)
T PRK04781 62 PGLRSALAALYGCAPEQLLIGRGSDE--AIDLLVRALC-----VPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGA 134 (364)
T ss_pred HHHHHHHHHHhCcChHHEEEeCCHHH--HHHHHHHHhc-----CCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCc
Confidence 47888899999998767777677653 3334444432 133 6789987766555555788999999999843
Q ss_pred CC-CCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHH--cCCEEEEeccCcccccCcCCC---CccCC
Q 001531 712 KG-NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQVGLTSP---GYIGA 784 (1058)
Q Consensus 712 ~g-~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~--~g~lv~vD~a~~~al~gl~~p---g~~Ga 784 (1058)
+| .+|++++.+++. .+++++|++++|| .+|.+. +.+++.++++. +++++++|+++.- +.....+ -+...
T Consensus 135 ~~~~~d~~~l~~~~~--~~~~~lv~l~~p~NPTG~~~-~~~~~~~l~~~~~~~~~iI~Deay~~-f~~~~~~~~~~~~~~ 210 (364)
T PRK04781 135 DGFHADVPAIVAAAL--ASNAKLVFLCSPSNPAGSAI-ALDQIERALQALQGKALVVVDEAYGE-FSDVPSAVGLLARYD 210 (364)
T ss_pred cCCCcCHHHHHHHHh--ccCCeEEEEcCCCCCCCCCc-CHHHHHHHHHhCCCCcEEEEeCcchh-hcCCcchHHHHhhCC
Confidence 34 579999866553 2688999999995 799987 56666666654 4789999998641 1110011 01111
Q ss_pred c-EEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHH
Q 001531 785 D-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 863 (1058)
Q Consensus 785 D-i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~l 863 (1058)
. |++.++.|+|+.| |.++|++.+++++.+.+-.. +...++++ .++. ++..++. -
T Consensus 211 ~vi~~~SfSK~~gl~----GlRvGy~v~~~~l~~~l~~~--------------~~~~~~~~--~~~~----~a~~~l~-~ 265 (364)
T PRK04781 211 NLAVLRTLSKAHALA----AARIGSLIANAELIAVLRRC--------------QAPYPVPT--PCAA----LAEQALS-A 265 (364)
T ss_pred CEEEEecChhhcccc----cceeeeeeCCHHHHHHHHhc--------------cCCCCCCH--HHHH----HHHHHHh-c
Confidence 2 5566778887544 78999999987766543211 01111221 1121 1122222 1
Q ss_pred c-hhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCC-CC
Q 001531 864 G-SKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM-SW 939 (1058)
Q Consensus 864 G-~eGl~~~a~~~~~~a~yL~~~L~~~--~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~-~~ 939 (1058)
+ .+-+.+..+...++++++.+.|++. +...++ +.+.+ ++++++ +..++.+.|.++||.+... .|
T Consensus 266 ~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p-~~g~f---~~~~~~--------~~~~~~~~l~~~gI~v~~~~~~ 333 (364)
T PRK04781 266 PALAVTARRVAEVRAERERLHAALAQLPGVRRVYP-SQGNF---LLVRFD--------DAEAAFQALLAAGVVVRDQRAA 333 (364)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECC-CCCcE---EEEEcC--------CHHHHHHHHHHCCeEEeeCCCC
Confidence 2 1223334445566778888889764 222232 12322 456653 4578899999999987533 23
Q ss_pred C-CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001531 940 P-VPGTLMIEPTESESKEELDRYCDALISIRE 970 (1058)
Q Consensus 940 p-~~~~Lris~te~~t~eeid~fi~aL~~i~~ 970 (1058)
+ ..+++||++. +.++.++|+++|+++..
T Consensus 334 ~~~~~~~Ris~~---~~~~~~~l~~al~~~~~ 362 (364)
T PRK04781 334 PRLSDALRITLG---TPEQNDRVLAALQRTQA 362 (364)
T ss_pred CCCCCeEEEeCC---CHHHHHHHHHHHHHHHh
Confidence 3 4578999985 68999999999987643
No 400
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.55 E-value=1.8e-12 Score=153.12 Aligned_cols=322 Identities=15% Similarity=0.202 Sum_probs=194.0
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCC---CceeeecCchHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGF---DSFSLQPNAGAAGEYAGLMVI 668 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~---~~~~l~~~sGa~ge~a~llai 668 (1058)
..+|++.+++..++..+. ....+..+. +.+ .+...++.+.|++++.. +. .++.++|++++++++..+
T Consensus 52 ~~lGh~~p~v~~ai~~ql-~~~~~~~~~-~~~-------~~~~~~la~~l~~~~p~~~~~~-~~f~~sGseA~e~AlklA 121 (421)
T PRK06777 52 LNTGHRHPKVVAAVRQQL-DQFTHTAYQ-IVP-------YASYVTLAERINALAPIDGPAK-TAFFTTGAEAVENAVKIA 121 (421)
T ss_pred hccCCCCHHHHHHHHHHH-hhccccccc-ccC-------ChHHHHHHHHHHHhCCCCCCce-EEEeCCcHHHHHHHHHHH
Confidence 457888887776666552 221111110 001 11234677888888753 33 355779999998888888
Q ss_pred HHHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCCc-------------EEEEEcCCCC--C---CCCHHHHHHHHHh--c
Q 001531 669 RAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------------KIVSVGTDAK--G---NINIEELRKAAEA--N 727 (1058)
Q Consensus 669 r~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G~-------------~vv~V~~d~~--g---~iD~e~L~~~i~~--~ 727 (1058)
|.|. +|++|+ ...++||....+....|. .+..++.... + ..|++++++.+++ +
T Consensus 122 r~~t------gr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~ 195 (421)
T PRK06777 122 RAYT------GRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIA 195 (421)
T ss_pred HHhh------CCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccC
Confidence 8762 344555 567899988766543331 1223332211 1 1246778888863 3
Q ss_pred CCCeEEEEEEcC-CCccccc---ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCc------cC--CcEEEeCCcccc
Q 001531 728 RDNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY------IG--ADVCHLNLHKTF 795 (1058)
Q Consensus 728 ~~~taaV~vt~P-n~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~------~G--aDi~~~s~hKtf 795 (1058)
.+++++|+++.. +..|+.. +.+++|.++|+++|+++++|+++. |+.+.|. +| .|++++ .|.+
T Consensus 196 ~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t----g~gr~g~~~~~~~~~~~pDiv~~--sK~l 269 (421)
T PRK06777 196 PDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQT----GFARTGKLFAMEYYDVKPDLITM--AKSL 269 (421)
T ss_pred CCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh----CCccCCchhhhhhcCCCCCEEee--ehhh
Confidence 467888887643 3456542 259999999999999999999864 3333332 23 687754 4766
Q ss_pred ccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHH
Q 001531 796 CIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIA 875 (1058)
Q Consensus 796 ~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~ 875 (1058)
+ ||..+|++++++++.+.+.... ..+. +.|++..++++.+.|..+..+.+ .++.
T Consensus 270 ----~-~G~pigav~~~~~i~~~~~~~~--------------~~~T----~~~~p~~~aaa~a~L~~~~~~~l---~~~~ 323 (421)
T PRK06777 270 ----G-GGMPISAVVGRAEVMDAPAPGG--------------LGGT----YAGNPLAVAAALAVLDVIAEEKL---CQRA 323 (421)
T ss_pred ----c-CCCceEEEEEcHHHHhccCCCC--------------CCCC----CCcCHHHHHHHHHHHHHHHhccH---HHHH
Confidence 3 4567899999987766542110 0011 22455666667777776655443 4455
Q ss_pred HHHHHHHHHHHhcc---CCee--eccCCCccceEEEEecccccccCCCC----HHHHHHHHHHCCccccCC-CCCCCCEE
Q 001531 876 ILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIE----PEDVAKRLMDYGFHGPTM-SWPVPGTL 945 (1058)
Q Consensus 876 ~~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~~~~~~g~~----~~~v~k~L~~~Gi~~~~~-~~p~~~~L 945 (1058)
..+.++|.++|+++ ++++ ..| .|.++ -+.++.+. .+.+ ...+.+.|.++|+.+... .| .+.+
T Consensus 324 ~~~g~~l~~~L~~l~~~~~~i~~vrg-~G~~~-~i~~~~~~----~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~--g~~l 395 (421)
T PRK06777 324 LILGAHLVEVLEKAKASCPAIVDIRA-RGSMV-AVEFNDPQ----TGKPSPEFTRQYQRQALEEGLLLLSCGVH--GNVI 395 (421)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEecC-ceEEE-EEEEecCc----cCCccHHHHHHHHHHHHhCCeEEeecCCC--CCEE
Confidence 56778898888774 3321 222 23222 11122111 1111 345666678899986422 22 4789
Q ss_pred EEEcCCCCCHHHHHHHHHHHHHHH
Q 001531 946 MIEPTESESKEELDRYCDALISIR 969 (1058)
Q Consensus 946 ris~te~~t~eeid~fi~aL~~i~ 969 (1058)
||.|....|++++|+.++.|.+.+
T Consensus 396 r~~ppl~i~~~~i~~~~~~l~~~l 419 (421)
T PRK06777 396 RFLYPLTIPDAQFSKALNILTRLL 419 (421)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHH
Confidence 999999999999999999998775
No 401
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.55 E-value=1.1e-12 Score=152.58 Aligned_cols=304 Identities=15% Similarity=0.097 Sum_probs=181.0
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCC-
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 712 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~- 712 (1058)
..++++++++.+|.+.+ +.+++|++|.. ++++.+ +.+++++||++...|......+...|++++.++++++
T Consensus 33 ~~~~e~~la~~~g~~~~-v~~~sgt~aL~---~~l~al----~~~pGd~Viv~~~t~~~~~~~~~~~G~~~v~vd~d~~~ 104 (376)
T TIGR02379 33 SRRCETWLENRTGTKKA-LLTPSCTAALE---MAALLL----DIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDT 104 (376)
T ss_pred HHHHHHHHHHHhCCCeE-EEeCCHHHHHH---HHHHHc----CCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCc
Confidence 45778899999998865 45566665542 223322 2246789999987665555556788999999999877
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCccccc-CcCCCCccCCcEEEeCC
Q 001531 713 GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV-GLTSPGYIGADVCHLNL 791 (1058)
Q Consensus 713 g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~-gl~~pg~~GaDi~~~s~ 791 (1058)
+.+|+++++++++ ++|++|+.++| +|... |+++|.++|+++|++++.|+++..+.. .-...|.+ .|+.++|+
T Consensus 105 ~~~d~~~le~~i~---~~tk~Iip~~~--~G~~~-d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~~~g~~-~~~~~fSf 177 (376)
T TIGR02379 105 MNIDETLIESAIT---HRTKAIVPVHY--AGVAC-DMDTIMALANKHQLFVIEDAAQGVMSTYKGRALGSI-GHLGTFSF 177 (376)
T ss_pred CCCCHHHHHHhcC---cCceEEEEeCC--CCCcc-CHHHHHHHHHHCCCEEEEECccccCCccCCcccCCC-CCEEEEeC
Confidence 5899999999997 78999988776 47776 799999999999999999999753211 01122333 38888998
Q ss_pred ccccccCCCCCCCceeEEEEe-CCCCCCCCC-CCcccCCC-C--CCCCC---CCCCCCCCccchhhHHHHHHHHHHHHHH
Q 001531 792 HKTFCIPHGGGGPGMGPIGVK-KHLAPFLPS-HPVVSTGG-I--PAPEK---SQPLGTIAAAPWGSALILPISYTYIAMM 863 (1058)
Q Consensus 792 hKtf~~P~g~GGPg~G~i~~~-~~l~~~lpg-~~vg~~~d-~--g~~~~---~~~t~~i~sa~~g~~~~~~~a~a~l~~l 863 (1058)
|++ +.+..||. +|++.++ +++.+.+.. +..|...+ . +.... .....|... +-..++...+.+..
T Consensus 178 ~~~--K~l~~g~~-gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~----~~~~Aa~g~~qL~~- 249 (376)
T TIGR02379 178 HET--KNYTSGGE-GGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLP----SELQAAYLWAQLEQ- 249 (376)
T ss_pred CCC--CcCcccCC-ceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCc----cHHHHHHHHHHHHH-
Confidence 874 33333433 4666665 444443310 00111000 0 00000 000011111 11122222232332
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhccC--C-eeecc-CC--CccceEEEEecccccccCCCCHHHHHHHHHHCCccccCC
Q 001531 864 GSKGLTEASKIAILNANYMAKRLEKHY--P-ILFRG-VN--GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 937 (1058)
Q Consensus 864 G~eGl~~~a~~~~~~a~yL~~~L~~~~--~-v~~~g-~~--~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~ 937 (1058)
+.+..++..+++++..+.|+++. . +..+. ++ ....|.+.+.++. +.+.+++.+.|.++||.....
T Consensus 250 ----l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----~~~r~~l~~~L~~~gI~~~~~ 320 (376)
T TIGR02379 250 ----ADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKD-----EDDRNELIKYLKEQEIMAVFH 320 (376)
T ss_pred ----hHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECC-----cCCHHHHHHHHHHCCCCcccc
Confidence 34444555566777778876642 1 11111 11 1233455555541 246789999999999975311
Q ss_pred C------------------CCC-----CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001531 938 S------------------WPV-----PGTLMIEPTESESKEELDRYCDALISIR 969 (1058)
Q Consensus 938 ~------------------~p~-----~~~Lris~te~~t~eeid~fi~aL~~i~ 969 (1058)
. +|. ...+.+-.....|++|+++.+++|+++.
T Consensus 321 ~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 321 YVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred CcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 1 110 2346666666789999999999998753
No 402
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.55 E-value=2.7e-12 Score=151.06 Aligned_cols=302 Identities=13% Similarity=0.103 Sum_probs=172.2
Q ss_pred HHHHHHHHHhCC------CceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcC
Q 001531 636 NLGEWLCTITGF------DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGT 709 (1058)
Q Consensus 636 el~~~lael~G~------~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~ 709 (1058)
++++.+++++|. +...+..++|++. +..++++.+. .++++|+++...+..+...+...|++++.++.
T Consensus 77 ~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~--al~~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~ 149 (403)
T TIGR01265 77 AAREAVAEYLSSDLPGKLTADDVVLTSGCSQ--AIEICIEALA-----NPGANILVPRPGFPLYDTRAAFSGLEVRLYDL 149 (403)
T ss_pred HHHHHHHHHHHhhcCCCCCHHHEEEecChHH--HHHHHHHHhC-----CCCCEEEEeCCCchhHHHHHHHcCCEEEEecC
Confidence 455566666653 2333444444431 3344444432 24678999887666555667889999999987
Q ss_pred CC--CCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--ccHHHHHHHHHHcCCEEEEeccCccc-ccC--cCCCCc
Q 001531 710 DA--KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG--LTSPGY 781 (1058)
Q Consensus 710 d~--~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~a-l~g--l~~pg~ 781 (1058)
++ ++.+|++++++++. ++++++++++| |.+|.+- +++++|.++|+++|+++++|+++..- ..+ +.....
T Consensus 150 ~~~~~~~~d~~~l~~~~~---~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~ 226 (403)
T TIGR01265 150 LPEKDWEIDLDGLEALAD---EKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMAS 226 (403)
T ss_pred CcccCCccCHHHHHHHhC---cCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhh
Confidence 54 36799999999886 68899999999 4689884 25899999999999999999986311 111 001111
Q ss_pred cC--Cc-EEEeCCccccccCCCCCCCceeEEEEeC--CCCCC-CCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHH
Q 001531 782 IG--AD-VCHLNLHKTFCIPHGGGGPGMGPIGVKK--HLAPF-LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 855 (1058)
Q Consensus 782 ~G--aD-i~~~s~hKtf~~P~g~GGPg~G~i~~~~--~l~~~-lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~ 855 (1058)
+. .. |++.++.|+|+.| |-++|++.+.. .+... +-..+. . ......+.+...|. +
T Consensus 227 ~~~~~~vi~~~S~SK~~~~p----GlRiG~~v~~~~~~~~~~~~~~~~~----------~-~~~~~~~~~~~~q~----~ 287 (403)
T TIGR01265 227 FASIVPVLSLGGISKRWVVP----GWRLGWIIIHDPHGIFRDTVLQGLK----------N-LLQRILGPATIVQG----A 287 (403)
T ss_pred hccCCcEEEEeecccccCCC----cceEEEEEEeCchhhhHHHHHHHHH----------H-HhhhhcCCChHHHH----H
Confidence 11 12 4556788887654 67899998852 22110 000000 0 00000111111121 1
Q ss_pred HHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHH-HCCccc
Q 001531 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHG 934 (1058)
Q Consensus 856 a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~-~~Gi~~ 934 (1058)
+..++......-+++..++...+++++.+.|+....+.+..+++..+ ++++++.-......+..+++++|. ++|+.+
T Consensus 288 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~f--~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v 365 (403)
T TIGR01265 288 LPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKPEGAMY--LMVKLELELFPEIKDDVDFCEKLVREESVIC 365 (403)
T ss_pred HHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCceeE--EEEeccccccCCCCCHHHHHHHHHHhCCEEE
Confidence 12222221122344455666677888989998642222222333222 456654200000125678888864 789975
Q ss_pred c-CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001531 935 P-TMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1058)
Q Consensus 935 ~-~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~ 970 (1058)
. ...|...+.+||++.. .++.+++.++.|.++++
T Consensus 366 ~pg~~f~~~~~iRis~~~--~~~~l~~~l~~l~~~~~ 400 (403)
T TIGR01265 366 LPGSAFGLPNWVRITITV--PESMLEEACSRIKEFCE 400 (403)
T ss_pred eCccccCCCCeEEEEecC--CHHHHHHHHHHHHHHHH
Confidence 3 3334346899999974 46666666666665543
No 403
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.55 E-value=6.6e-13 Score=155.80 Aligned_cols=212 Identities=19% Similarity=0.207 Sum_probs=144.3
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHH----HHHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa----~a~~~G~~vv~V~~ 709 (1058)
..++++.++++.|.+.+ +..++|+.+...+ ++... +++++||++...|+.... .+...|++++.++.
T Consensus 67 ~~~le~~lA~l~g~~~~-i~~~sG~~Al~~~---l~~ll-----~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 137 (403)
T PRK07503 67 LALLEQRMASLEGGEAA-VALASGMGAITAT---LWTLL-----RPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDL 137 (403)
T ss_pred HHHHHHHHHHHhCCCcE-EEEcCHHHHHHHH---HHHHc-----CCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCC
Confidence 45788999999998864 5566777654333 33221 356889998877754322 24568999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
.|+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++... ....|..+|+|+++
T Consensus 138 -----~d~~~l~~~i~---~~tklV~le~p~NPtG~~~-di~~I~~la~~~gi~lIvD~a~a~~--~~~~~l~~g~Di~v 206 (403)
T PRK07503 138 -----TDPAALKAAIS---DKTRMVYFETPANPNMRLV-DIAAVAEIAHGAGAKVVVDNTYCTP--YLQRPLELGADLVV 206 (403)
T ss_pred -----CCHHHHHHhcC---ccCcEEEEeCCCCCCCeee-CHHHHHHHHHHcCCEEEEECCCccc--ccCCchhhCCCEEE
Confidence 37999999996 78999999998 4789887 8999999999999999999987432 23456668999999
Q ss_pred eCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhH
Q 001531 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl 868 (1058)
.|++|+|+.+ |+..+|+++.++++...+... +. + ..++ .+.++ . .+ ++...|-+-+
T Consensus 207 ~S~tK~l~g~---gd~~gG~v~~~~~l~~~l~~~--~~--------~-~~~g-~~~s~----~---~a--~l~l~~L~tl 262 (403)
T PRK07503 207 HSATKYLGGH---GDITAGLVVGGKALADRIRLE--GL--------K-DMTG-AVMSP----F---DA--FLLMRGLKTL 262 (403)
T ss_pred ccccccccCC---CceeEEEEEcCHHHHHHHHhh--hH--------H-hCcC-CCCCH----H---HH--HHHHcCcchH
Confidence 9999998521 234478888776655443210 00 0 0111 11111 1 11 2233344445
Q ss_pred HHHHHHHHHHHHHHHHHHhcc
Q 001531 869 TEASKIAILNANYMAKRLEKH 889 (1058)
Q Consensus 869 ~~~a~~~~~~a~yL~~~L~~~ 889 (1058)
....++..+++..+++.|+++
T Consensus 263 ~~r~~~~~~na~~~a~~L~~~ 283 (403)
T PRK07503 263 ALRMDRHCASAQAVAEWLARH 283 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhC
Confidence 556677778999999999875
No 404
>PLN02509 cystathionine beta-lyase
Probab=99.55 E-value=3.1e-13 Score=159.94 Aligned_cols=216 Identities=19% Similarity=0.225 Sum_probs=148.0
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHH----HHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~----a~~~G~~vv~V~~ 709 (1058)
..+++++++++.|.+.+ +..++|..+. +.++.+ - +++|+||++...|+.+... +...|++++.++.
T Consensus 135 ~~aLE~~lA~leg~e~a-i~~~SG~aAi-~~il~l----l----~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~ 204 (464)
T PLN02509 135 RDALESLLAKLDKADRA-FCFTSGMAAL-SAVTHL----I----KNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT 204 (464)
T ss_pred HHHHHHHHHHHhCCCEE-EEeCcHHHHH-HHHHHH----h----CCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCC
Confidence 56788999999997765 4456675443 222221 1 2568999998877665432 4568999998875
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
.|+++++++++ ++|++|++++| |.+|.+. ||++|+++||++|+++++|+++..+. +..|..+|+|+++
T Consensus 205 -----~d~e~l~~ai~---~~TklV~lesPsNPtG~i~-Dl~~I~~lAk~~g~~lIVD~A~a~~~--~~~pl~~gaDivv 273 (464)
T PLN02509 205 -----TNLDEVAAAIG---PQTKLVWLESPTNPRQQIS-DIRKIAEMAHAQGALVLVDNSIMSPV--LSRPLELGADIVM 273 (464)
T ss_pred -----CCHHHHHHhCC---cCCeEEEEECCCCCCCCHH-HHHHHHHHHHHcCCEEEEECCccccc--cCChhhcCCcEEE
Confidence 47899999996 78999999999 5789987 89999999999999999999864332 3567778999999
Q ss_pred eCCccccccCCCCCCCceeEEEEeCCC-CCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001531 789 LNLHKTFCIPHGGGGPGMGPIGVKKHL-APFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~G~i~~~~~l-~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1058)
.+++|+++.| |+..+|+++++++. ...+. .. + +..+... +++ . +++...|-+-
T Consensus 274 ~S~tK~l~G~---gdv~gG~v~~~~~~l~~~~~--~~----------~-~~~g~~l-~p~-------~--A~l~lr~L~t 327 (464)
T PLN02509 274 HSATKFIAGH---SDVMAGVLAVKGEKLAKEVY--FL----------Q-NSEGSGL-APF-------D--CWLCLRGIKT 327 (464)
T ss_pred ecCcccccCC---CccceeEEEeccHHHHHHHH--HH----------H-HhcCCCc-CHH-------H--HHHHHhhhhh
Confidence 9999998522 33447888886532 21110 00 0 0001100 111 1 2233444455
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC---Ceeecc
Q 001531 868 LTEASKIAILNANYMAKRLEKHY---PILFRG 896 (1058)
Q Consensus 868 l~~~a~~~~~~a~yL~~~L~~~~---~v~~~g 896 (1058)
+..+.++..++|.++++.|+++. +|.|+|
T Consensus 328 L~~R~~r~~~nA~~la~~L~~~p~V~~V~yPg 359 (464)
T PLN02509 328 MALRIEKQQENARKIAMYLSSHPRVKKVYYAG 359 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccEEECCC
Confidence 66677888899999999999862 456765
No 405
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.55 E-value=8.4e-13 Score=155.77 Aligned_cols=271 Identities=17% Similarity=0.168 Sum_probs=168.5
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHH----HHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~----a~~~G~~vv~V~~ 709 (1058)
..++++.++++.|.+.+ +..++|..|...++.++ . .++++||++...|+..... +...|+++++++.
T Consensus 66 ~~~le~~lA~l~g~~~a-v~~sSGt~Al~~al~~l---l-----~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 136 (433)
T PRK08134 66 VAVLEERVAALEGGVGA-IATASGQAALHLAIATL---M-----GAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKP 136 (433)
T ss_pred HHHHHHHHHHHhCCCcE-EEeCCHHHHHHHHHHHH---h-----CCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECC
Confidence 56889999999998875 56777876654333332 1 2467899988766533222 3458999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
+ |+++|+++|+ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+. +..|-++|+|+++
T Consensus 137 ~-----d~~~l~~~i~---~~TklV~~e~~~np~g~v~-Di~~I~~la~~~gi~livD~t~a~~~--~~~pl~~GaD~vv 205 (433)
T PRK08134 137 G-----DIDGWRAAIR---PNTRLLFGETLGNPGLEVL-DIPTVAAIAHEAGVPLLVDSTFTTPY--LLRPFEHGADLVY 205 (433)
T ss_pred C-----CHHHHHHhcC---CCCeEEEEECCCcccCccc-CHHHHHHHHHHcCCEEEEECCCcccc--cCCchhcCCCEEE
Confidence 4 8999999997 899999999984 678887 89999999999999999999865333 3567789999999
Q ss_pred eCCccccccCCCCCCCc--eeEEEEe-CCC-------CCCCCCCCccc-----CCCCCCC-----CCCCCCCCCCccchh
Q 001531 789 LNLHKTFCIPHGGGGPG--MGPIGVK-KHL-------APFLPSHPVVS-----TGGIPAP-----EKSQPLGTIAAAPWG 848 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg--~G~i~~~-~~l-------~~~lpg~~vg~-----~~d~g~~-----~~~~~t~~i~sa~~g 848 (1058)
.|.||+++ |+| +|.+++. ..+ .+.+.....++ +.+.... .+.....+. |
T Consensus 206 ~S~tK~l~------g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----G 274 (433)
T PRK08134 206 HSATKFLG------GHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDF-----G 274 (433)
T ss_pred eccccccC------CCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHHHHhc-----C
Confidence 99999984 444 3333332 211 11111111111 0000000 000000000 1
Q ss_pred hHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCe---eeccCCCccceEEEEecccccccCCCCHHHHHH
Q 001531 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPI---LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAK 925 (1058)
Q Consensus 849 ~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v---~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k 925 (1058)
..+. ..-+++...|-+-+..+.++..++|..+++.|+++..| .|++ +. .-...++++
T Consensus 275 ~~ls--~~~A~l~~~gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~---------------l~---~~p~~~~~~ 334 (433)
T PRK08134 275 ACLS--PMNAWQLLQGIETLPLRMERHVANTRKVVAFLASHPAVARVAHPE---------------LE---SHPDHALAK 334 (433)
T ss_pred CCCC--HHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCC---------------CC---CCccHHHHH
Confidence 0001 11234555666677788888899999999999986332 2322 10 012245666
Q ss_pred HHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q 001531 926 RLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALI 966 (1058)
Q Consensus 926 ~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~ 966 (1058)
+.+..|+ .+.+-|.+. .++++..+|++.|+
T Consensus 335 ~~~~~g~---------gg~~s~~l~--~~~~~~~~f~~~l~ 364 (433)
T PRK08134 335 RLLPRGA---------GSVFSFDLK--GGRAAGRKFIESLK 364 (433)
T ss_pred HhCCCCC---------ceEEEEEec--CCHHHHHHHHHhCC
Confidence 5543331 244444443 35778889998886
No 406
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.55 E-value=3.4e-13 Score=157.54 Aligned_cols=284 Identities=15% Similarity=0.104 Sum_probs=177.2
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHH----HHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~----a~~~G~~vv~V~~ 709 (1058)
..++++.++++.|.+.. +..++|+.+..++++++ . +++++|+++...|+..... +...|+++..++.
T Consensus 63 ~~~Le~~lA~l~G~~~a-l~~~sG~~Ai~~~l~al---~-----~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~ 133 (386)
T PRK06767 63 VKLFEERMAVLEGGEEA-LAFGSGMAAISATLIGF---L-----KAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDM 133 (386)
T ss_pred hHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHH---h-----CCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCC
Confidence 34788999999998754 55667766553333332 1 2567899988766644333 2346777777765
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++. .+.+..|...|+|+++
T Consensus 134 -----~d~~~l~~~i~---~~tklV~lesp~NptG~v~-dl~~I~~la~~~g~~vivD~a~a--~~~~~~pl~~g~Div~ 202 (386)
T PRK06767 134 -----ETEADIENKIR---PNTKLIFVETPINPTMKLI-DLKQVIRVAKRNGLLVIVDNTFC--SPYLQRPLELGCDAVV 202 (386)
T ss_pred -----CCHHHHHHhhC---cCceEEEEeCCCCCCceec-CHHHHHHHHHHcCCEEEEECCCc--ccccCCchhcCCcEEE
Confidence 48999999996 789999999995 689887 79999999999999999999864 2234456678999999
Q ss_pred eCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhH
Q 001531 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl 868 (1058)
.+++|+|+.+ |.+-+|++++++++...+-... + ...+...+ + . .+|.. ..|-+-+
T Consensus 203 ~S~sK~l~g~---g~~~gG~v~~~~~~i~~~~~~~-----------~-~~~g~~~~-~----~---~a~l~--~~~L~tl 257 (386)
T PRK06767 203 HSATKYIGGH---GDVVAGVTICKTRALAEKIRPM-----------R-KDIGGIMA-P----F---DAWLL--LRGLKTL 257 (386)
T ss_pred ecCcceecCC---CCceeEEEEeChHHHHHHHHHH-----------H-HHhCCCCC-H----H---HHHHH--HcCCCcH
Confidence 9999998521 2233689988876443221000 0 00111111 1 1 12333 3333344
Q ss_pred HHHHHHHHHHHHHHHHHHhcc--CC-eeeccCC------CccceEEEEecccccccCCCCHHHHHHHHHHCCcccc----
Q 001531 869 TEASKIAILNANYMAKRLEKH--YP-ILFRGVN------GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP---- 935 (1058)
Q Consensus 869 ~~~a~~~~~~a~yL~~~L~~~--~~-v~~~g~~------~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~---- 935 (1058)
..+.++..+++.+++++|+++ +. +.|++.+ ...-..+.|++.. ...++.++.++|...++.++
T Consensus 258 ~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~----~~~~~~~f~~~l~~~~~~~s~G~~ 333 (386)
T PRK06767 258 AVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKG----GKEETQAFINDLHFITIAVSLGDT 333 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcC----CHHHHHHHHHhCCccEEecCCCCc
Confidence 556677788999999999986 33 2332100 0011124455431 01245678888876654321
Q ss_pred -C-CCCC------------------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001531 936 -T-MSWP------------------VPGTLMIEPTESESKEELDRYCDALISIRE 970 (1058)
Q Consensus 936 -~-~~~p------------------~~~~Lris~te~~t~eeid~fi~aL~~i~~ 970 (1058)
+ +..| .++.+|+|+.. |+.|.++++|.++++
T Consensus 334 ~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl----E~~~dl~~dl~~al~ 384 (386)
T PRK06767 334 ETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGL----ESWEDIVSDLEQALK 384 (386)
T ss_pred CccccCCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHh
Confidence 1 1111 13679999864 466777777777664
No 407
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.55 E-value=1.2e-12 Score=154.57 Aligned_cols=142 Identities=23% Similarity=0.216 Sum_probs=118.3
Q ss_pred HHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---h
Q 001531 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---D 290 (1058)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~---~ 290 (1058)
.++++.+|+++|.+. +.++.+|++++.++++++. ++||+||++...|+.+...+...++..|++++.++.+ +
T Consensus 60 ~~le~~lA~l~g~~~--~v~~~sG~~Ai~~al~~l~---~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~d~~~ 134 (418)
T TIGR01326 60 DVLEQRIAALEGGVA--ALAVASGQAAITYAILNLA---QAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPDDPEE 134 (418)
T ss_pred HHHHHHHHHHhCCCe--EEEEccHHHHHHHHHHHHh---CCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCCCHHH
Confidence 467889999999764 7788999999888887662 2799999999999988887776677789999998764 4
Q ss_pred hhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-ccccc
Q 001531 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGV 361 (1058)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~ 361 (1058)
+++ +++++++|++.+| |.+|.+.|+++|+++||++|++++|| +.++.+....|.++|+||++.|. |.|++
T Consensus 135 l~~~l~~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD-~t~~~~~~~~~l~~g~Divv~S~sK~l~g 207 (418)
T TIGR01326 135 FEKAIDENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVD-NTFATPYLCRPIDHGADIVVHSATKYIGG 207 (418)
T ss_pred HHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCCchhhcCCchhcCCeEEEECccccccC
Confidence 555 7788999999987 78999999999999999999999994 45666666667788999999998 87764
No 408
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.55 E-value=6.8e-13 Score=155.62 Aligned_cols=212 Identities=21% Similarity=0.210 Sum_probs=146.1
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHH----HHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~----a~~~G~~vv~V~~ 709 (1058)
..++++.++++.|.+.+ +..++|..+..+.++++. +++++|+++...|+..... +...|++++.++.
T Consensus 66 ~~~Le~~iA~~~g~~~~-l~~~sG~~Ai~~al~~ll--------~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~ 136 (400)
T PRK06234 66 STEVENKLALLEGGEAA-VVAASGMGAISSSLWSAL--------KAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDT 136 (400)
T ss_pred HHHHHHHHHHHhCCCcE-EEEcCHHHHHHHHHHHHh--------CCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECC
Confidence 34788999999998753 666777765543333321 2567899988777654432 4678999999986
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHc--CCEEEEeccCcccccCcCCCCccCCcE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQVGLTSPGYIGADV 786 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~--g~lv~vD~a~~~al~gl~~pg~~GaDi 786 (1058)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++ |+++++|+++... .+..|..+|+|+
T Consensus 137 -----~d~e~l~~~i~---~~tklI~iesP~NPtG~v~-dl~~I~~la~~~~~~i~livDea~~~~--~~~~~l~~g~Di 205 (400)
T PRK06234 137 -----SNLEEVRNALK---ANTKVVYLETPANPTLKVT-DIKAISNIAHENNKECLVFVDNTFCTP--YIQRPLQLGADV 205 (400)
T ss_pred -----CCHHHHHHHhc---cCCeEEEEECCCCCCCCcC-CHHHHHHHHHhcCCCCEEEEECCCCch--hcCCchhhCCcE
Confidence 38999999997 789999999995 789987 799999999997 9999999986432 234566779999
Q ss_pred EEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001531 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1058)
Q Consensus 787 ~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1058)
++.+++|+|+.+ |...+|++++++++.+.+... + ....++. +.++ . .+ ++...|-+
T Consensus 206 vv~S~sK~l~g~---g~~~gG~v~~~~~~~~~l~~~--~---------~~~~~g~-~l~p----~---~a--~l~~~~l~ 261 (400)
T PRK06234 206 VVHSATKYLNGH---GDVIAGFVVGKEEFINQVKLF--G---------IKDMTGS-VIGP----F---EA--FLIIRGMK 261 (400)
T ss_pred EEeeccccccCC---CCceeEEEEecHHHHHHHHHH--H---------HHHhcCC-CCCH----H---HH--HHHHhccC
Confidence 999999998522 212369999987665443100 0 0001111 1111 1 12 23334444
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc
Q 001531 867 GLTEASKIAILNANYMAKRLEKH 889 (1058)
Q Consensus 867 Gl~~~a~~~~~~a~yL~~~L~~~ 889 (1058)
-+..+.++..+++.++++.|+++
T Consensus 262 tl~~r~~~~~~na~~~a~~L~~~ 284 (400)
T PRK06234 262 TLQIRMEKHCKNAMKVAKFLESH 284 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcC
Confidence 45566677778999999999875
No 409
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.55 E-value=7.9e-13 Score=156.09 Aligned_cols=288 Identities=20% Similarity=0.239 Sum_probs=172.9
Q ss_pred HHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCC----c--cHHHHHhCCcEEEE
Q 001531 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHG----T--NPATAAMCGMKIVS 706 (1058)
Q Consensus 633 ~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg----~--~pa~a~~~G~~vv~ 706 (1058)
...++++.+++++|.+.+. ..++|+.|...++ ..+ .++++||+++..|. + .|..+...|+++++
T Consensus 123 r~~~le~~lA~l~gae~al-vv~sg~aAi~l~l---~~l------~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~ 192 (454)
T TIGR00474 123 RYSHVEGLLCELTGAEDAL-VVNNNAAAVLLAL---NTL------AKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVE 192 (454)
T ss_pred HHHHHHHHHHHHhCCCcEE-EECCHHHHHHHHH---HHh------CCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEE
Confidence 3568899999999998754 4567776553332 221 24678999876542 2 23346678999999
Q ss_pred EcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCC---ccc--ccccHHHHHHHHHHcCCEEEEeccCcc--c---ccC-
Q 001531 707 VGTDAKGNINIEELRKAAEANRDNLSTLMVTYPST---HGV--YEEGIDEICKIIHDNGGQVYMDGANMN--A---QVG- 775 (1058)
Q Consensus 707 V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~---~G~--i~~dI~eI~~lah~~g~lv~vD~a~~~--a---l~g- 775 (1058)
++.+ +..|+++++++|+ ++|++|++.+++. .|. +. |+++|+++||++|+++++|.+... . ++.
T Consensus 193 v~~~--~~~~l~dle~aI~---~~T~lv~~~h~sN~~~~G~~~~~-dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~ 266 (454)
T TIGR00474 193 VGTT--NRTHLKDYEDAIT---ENTALLLKVHTSNYRIVGFTEEV-SIAELVALGREHGLPVMEDLGSGSLVDLSRYGLP 266 (454)
T ss_pred eCCC--CCCCHHHHHHhcC---cCCEEEEEEccCcccccCCCCCC-CHHHHHHHHHHcCCeEEEECCCcccccchhccCC
Confidence 9763 4578999999997 8899999988853 353 33 799999999999999999964110 0 000
Q ss_pred ----cCCCCccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHH
Q 001531 776 ----LTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1058)
Q Consensus 776 ----l~~pg~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~ 851 (1058)
+..+.++|+|++++|+||+| |||..|++++++++.+.+....+...- + -.|. . .+.
T Consensus 267 ~~p~~~~~~~~GaDiv~fSg~K~L------gGp~~G~i~g~~~~i~~l~~~~l~r~l----r-~~k~----~-----la~ 326 (454)
T TIGR00474 267 DEPTVQEVIAAGVDLVTFSGDKLL------GGPQAGIIVGKKELIERLKKNPLTRAL----R-VDKL----T-----LAA 326 (454)
T ss_pred CCcccccHhHcCCCEEEecCcccc------CCCeEEEEEECHHHHHhhhhchhHHHH----h-hChH----H-----HHH
Confidence 12345689999999999998 578889999998777665433221100 0 0000 0 000
Q ss_pred HHHHHHHH-------HHHHchhhHHHHHHHHHHHHHHHHHHHhcc----C--Ceeecc------C-CCccceEEEEeccc
Q 001531 852 ILPISYTY-------IAMMGSKGLTEASKIAILNANYMAKRLEKH----Y--PILFRG------V-NGTVAHEFIVDLRG 911 (1058)
Q Consensus 852 ~~~~a~a~-------l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~----~--~v~~~g------~-~~~~~~e~vv~~~~ 911 (1058)
.....-.| +..-|-+-+....++..++|..+++.|++. + ++.... . .+.....+.+.+.+
T Consensus 327 l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~ 406 (454)
T TIGR00474 327 LEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLTP 406 (454)
T ss_pred HHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEec
Confidence 00001111 111111112222345566888888888763 2 222110 0 01112234444432
Q ss_pred ccccCCCCHHHHHHHHHHCC--ccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHH
Q 001531 912 LKNTAGIEPEDVAKRLMDYG--FHGPTMSWPVPGTLMIEPTESESKEELDRYCDAL 965 (1058)
Q Consensus 912 ~~~~~g~~~~~v~k~L~~~G--i~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL 965 (1058)
.+.++.++.++|.+.. |++. +. .+.+.+-+-- ...+|++.+++.|
T Consensus 407 ----~~~~~~~l~~~lr~~~~~ii~r-~~---~~~~~ld~r~-~~~~~~~~~~~~~ 453 (454)
T TIGR00474 407 ----DGLSAEKLEARLRELPPPIIGR-IE---DDRFLLDLRT-LLEDEEELLIEAL 453 (454)
T ss_pred ----CCCCHHHHHHHHhcCCCCEEEE-EE---CCEEEEEeCc-CCHHHHHHHHHHh
Confidence 2567899999998654 3332 21 4666665532 3567888888765
No 410
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.54 E-value=2.2e-13 Score=157.43 Aligned_cols=296 Identities=13% Similarity=0.072 Sum_probs=174.6
Q ss_pred HHHHHHHHHHHHHHhCCCc---eeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHH-HHHhCCcEEEE
Q 001531 631 QEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA-TAAMCGMKIVS 706 (1058)
Q Consensus 631 ~~~~~el~~~lael~G~~~---~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa-~a~~~G~~vv~ 706 (1058)
.+++.+.++.+++++|.+. +.+..++|+.+..+++..+ . .++ .++++|++ ..++.+-. .++..|++++.
T Consensus 43 ~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l---~-~~~-~~~~~i~~--g~~~~~~~~~a~~~g~~~~~ 115 (355)
T cd00611 43 EAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNL---L-GDK-GTADYVVT--GAWSAKAAKEAKRYGGVVVI 115 (355)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhc---C-CCC-CeEEEEEC--CHHHHHHHHHHHhcCCCcEE
Confidence 4668899999999999742 3344555766554443333 1 122 13444443 21211111 45778999999
Q ss_pred EcCCCCCCC-C-HHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccC
Q 001531 707 VGTDAKGNI-N-IEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 783 (1058)
Q Consensus 707 V~~d~~g~i-D-~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~G 783 (1058)
++++++|.. + ++..+..++ ++++.|.+++- |.+|+.. . ++++.+|++++||+++..+...+ ...+++
T Consensus 116 ~~~~~~g~~~~~~~~~~~~~~---~~~~lV~~~h~~t~tG~~~---~---~i~~~~g~~~~VDa~qs~g~~~i-dv~~~~ 185 (355)
T cd00611 116 VAAKEEGKYTKIPDVETWDLA---PDAAYVHYCSNETIHGVEF---D---EVPDTGGVPLVADMSSNILSRPI-DVSKFG 185 (355)
T ss_pred EecccccCCCCCCCHhhcCCC---CCCCEEEEeCCcccccEEc---c---eecccCCCeEEEEccccccCCCC-CHHHhC
Confidence 998766533 4 233333343 78888888876 4588863 2 34455999999999976433222 122344
Q ss_pred CcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCC---CCCCCCCCCCCCccchhhHHHHHHHHHHH
Q 001531 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIP---APEKSQPLGTIAAAPWGSALILPISYTYI 860 (1058)
Q Consensus 784 aDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g---~~~~~~~t~~i~sa~~g~~~~~~~a~a~l 860 (1058)
+++.+.||.| |.||+|++++++++.+.++...... .++. .......|+++. .+....+.+
T Consensus 186 --~~~ss~~K~l------GP~G~g~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Tpn~~--------~i~~L~aal 248 (355)
T cd00611 186 --VIYAGAQKNL------GPAGVTVVIVRKDLLGKARKITPSM-LNYKTHADNNSLYNTPPTF--------AIYMMGLVL 248 (355)
T ss_pred --EEEeeccccc------CCCceEEEEECHHHHhhcccCCCCc-ccHHHHHhcCCCCCCChHH--------HHHHHHHHH
Confidence 5556689976 3368999999987665543221110 0110 000001222221 122234455
Q ss_pred HHHchh-hHHHHHHHHHHHHHHHHHHHhccCCeeeccC---CCccceEEEEecccccccCCC-CHHHHHHHHHHCCcccc
Q 001531 861 AMMGSK-GLTEASKIAILNANYMAKRLEKHYPILFRGV---NGTVAHEFIVDLRGLKNTAGI-EPEDVAKRLMDYGFHGP 935 (1058)
Q Consensus 861 ~~lG~e-Gl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~---~~~~~~e~vv~~~~~~~~~g~-~~~~v~k~L~~~Gi~~~ 935 (1058)
..+-++ |+..+.++...+++++.++|+++..+ +.++ ..+....+.|.+. +. ...++.+.+.++|++++
T Consensus 249 ~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl-~~~~~~~~~rs~~vvsf~~~------~~~l~~~~~~~~~r~G~~~~ 321 (355)
T cd00611 249 KWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGF-YRGPVDKRARSRMNVPFRLG------KEELEKEFLKEAEAAGMIGL 321 (355)
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccc-cccCCCHHHcCceEEEEEcC------ChhhhHHHHHHHHHCCCccc
Confidence 666666 68888899999999999999976333 2111 1111111334433 21 12455567778999865
Q ss_pred CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001531 936 TMSWPVPGTLMIEPTESESKEELDRYCDALISI 968 (1058)
Q Consensus 936 ~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i 968 (1058)
... ...+++|+|+...+|++|||+|+++|+++
T Consensus 322 ~~~-~~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 322 KGH-RSVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred CCC-cccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 432 12489999999999999999999999885
No 411
>PRK05939 hypothetical protein; Provisional
Probab=99.54 E-value=2.7e-12 Score=150.12 Aligned_cols=229 Identities=15% Similarity=0.122 Sum_probs=151.5
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHH---HHHhCCcEEEEEcCC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TAAMCGMKIVSVGTD 710 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa---~a~~~G~~vv~V~~d 710 (1058)
..++++.++++.|.+.+ +..++|..+..++++++. +++++||++...|+.+.. .+...|++++.++.
T Consensus 49 ~~~lE~~la~leg~~~~-v~~ssG~~Ai~~~l~all--------~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~- 118 (397)
T PRK05939 49 TAALEAKITKMEGGVGT-VCFATGMAAIAAVFLTLL--------RAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA- 118 (397)
T ss_pred HHHHHHHHHHHhCCCeE-EEeCCHHHHHHHHHHHHc--------CCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC-
Confidence 45788999999998865 455567655544443331 356889999887776544 25568999999987
Q ss_pred CCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEEe
Q 001531 711 AKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHL 789 (1058)
Q Consensus 711 ~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~~ 789 (1058)
.|+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++... ....|.++|+|+++.
T Consensus 119 ----~d~e~l~~~l~---~~tklV~vesp~NptG~v~-dl~~I~~la~~~gi~livD~t~a~~--~~~~~~~~gaDivv~ 188 (397)
T PRK05939 119 ----TDVQNVAAAIR---PNTRMVFVETIANPGTQVA-DLAGIGALCRERGLLYVVDNTMTSP--WLFRPKDVGASLVIN 188 (397)
T ss_pred ----CCHHHHHHhCC---CCCeEEEEECCCCCCCCHH-hHHHHHHHHHHcCCEEEEECCcccc--cccCccccCCEEEEe
Confidence 48999999996 88999999998 5789887 8999999999999999999986422 234677889999999
Q ss_pred CCccccccCCCCCCCceeEEEEeCCCCCCCC-CCCcccCCCCC--CC---C-C---CCCCCCCCccchhhHHHHHHHHHH
Q 001531 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLP-SHPVVSTGGIP--AP---E-K---SQPLGTIAAAPWGSALILPISYTY 859 (1058)
Q Consensus 790 s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lp-g~~vg~~~d~g--~~---~-~---~~~t~~i~sa~~g~~~~~~~a~a~ 859 (1058)
++||+|+. .|..+|.+.+.....+... ........++. .+ . + ...++...+ .--+|
T Consensus 189 S~sK~~~g----~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~----------p~~a~ 254 (397)
T PRK05939 189 SLSKYIAG----HGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLS----------SEAAH 254 (397)
T ss_pred cCeecccC----CCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCC----------HHHHH
Confidence 99999962 2344455555322211100 00000000000 00 0 0 001111111 11345
Q ss_pred HHHHchhhHHHHHHHHHHHHHHHHHHHhccC---Ceeecc
Q 001531 860 IAMMGSKGLTEASKIAILNANYMAKRLEKHY---PILFRG 896 (1058)
Q Consensus 860 l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~---~v~~~g 896 (1058)
+...|-+-+..+.+++.+||..+++.|++.. .|.|+|
T Consensus 255 l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~ 294 (397)
T PRK05939 255 RIAIGAETLALRVDRSCSNALALAQFLEAHPKVARVYYPG 294 (397)
T ss_pred HHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCC
Confidence 6667777888888889999999999999762 355655
No 412
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.54 E-value=1.6e-12 Score=151.36 Aligned_cols=212 Identities=18% Similarity=0.181 Sum_probs=150.3
Q ss_pred HHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---hh
Q 001531 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1058)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~---~~ 290 (1058)
.++++.+|++.|.+ ++.++.||++++.++++++ . ++||+|+++...|+++...+..+++..++++..++. ++
T Consensus 54 ~~le~~lA~l~g~~--~v~~~~gg~~Ai~~~l~al-l--~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~ 128 (382)
T TIGR02080 54 DLLQQALAELEGGA--GAVVTNTGMSAIHLVTTAL-L--GPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQA 128 (382)
T ss_pred HHHHHHHHHHhCCC--cEEEEcCHHHHHHHHHHHH-c--CCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHH
Confidence 35678999999954 5889999999988888776 3 389999999999999888887666666788888764 45
Q ss_pred hhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCCC
Q 001531 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1058)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~GG 367 (1058)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|| +.++.+....|-++|+|++++|. |.++++ ++
T Consensus 129 l~~ai~~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD-~a~~~~~~~~pl~~gaDivv~S~sK~l~G~---~~ 204 (382)
T TIGR02080 129 LRAALAQKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVD-NTFLSPALQNPLALGADLVLHSCTKYLNGH---SD 204 (382)
T ss_pred HHHhcCcCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCCEEEeecceeccCC---CC
Confidence 555 7788999999998 68999999999999999999999994 45565655566678999999998 777532 11
Q ss_pred CceEEEEEe-hhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHH
Q 001531 368 PHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1058)
Q Consensus 368 P~~G~l~~~-~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~i 446 (1058)
--.|++.++ +++.+++- ..|...| +|. +++ .+ |+...|-+-|...
T Consensus 205 ~~~G~i~~~~~~~~~~l~-------------------------~~~~~~g---~~~-sp~---~a--~l~lr~l~tl~~R 250 (382)
T TIGR02080 205 VIAGAVIAKDPQVAEELA-------------------------WWANNLG---VTG-GAF---DS--YLTLRGLRTLVAR 250 (382)
T ss_pred ceeEEEEeCCHHHHHHHH-------------------------HHHHccC---CCC-CHH---HH--HHHHcccchHHHH
Confidence 225776664 34433320 0001101 111 111 11 2334444455555
Q ss_pred HHHHHHHHHHHHHHHhcCCCeE
Q 001531 447 AQRVHGLAGTFALGLKKLGTVE 468 (1058)
Q Consensus 447 a~~~~~~a~~l~~~L~~~G~~~ 468 (1058)
.++..+++..+++.|++.+.++
T Consensus 251 ~~~~~~na~~~a~~L~~~p~v~ 272 (382)
T TIGR02080 251 MRLQQRNAQAIVEYLQTQPLVK 272 (382)
T ss_pred HHHHHHHHHHHHHHHHhCCCee
Confidence 6777799999999999876454
No 413
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.54 E-value=2.1e-12 Score=151.86 Aligned_cols=307 Identities=11% Similarity=0.132 Sum_probs=187.0
Q ss_pred hhcHHHHHHHHHHHHHHHhCCC--ce-eeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcE
Q 001531 627 AQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1058)
Q Consensus 627 ~qG~~~~~~el~~~lael~G~~--~~-~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~ 703 (1058)
.+|..++...+.+++.+..|.+ .. .+..++|++. +..++++.+. .+++.|+++++.+..+...+.+.|.+
T Consensus 70 ~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~--al~~~~~~l~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~ 142 (403)
T PRK08636 70 SKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKE--GYVHLVQAIT-----NPGDVAIVPDPAYPIHSQAFILAGGN 142 (403)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHH--HHHHHHHHhC-----CCCCEEEEcCCCCcchHHHHHhcCCE
Confidence 4687777777788887777854 33 4666667653 3334444432 35789999998777777778899999
Q ss_pred EEEEcCC--CCCCCCHHHH----HHHHHhcCCCeEEEEEEcC-CCccccc--ccHHHHHHHHHHcCCEEEEeccCcc-cc
Q 001531 704 IVSVGTD--AKGNINIEEL----RKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQ 773 (1058)
Q Consensus 704 vv~V~~d--~~g~iD~e~L----~~~i~~~~~~taaV~vt~P-n~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~-al 773 (1058)
++.++.+ ++..+|+++| +++++++..++.+|++++| |++|.+- +.+++|.++|++||+++++|.++.. ..
T Consensus 143 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~ 222 (403)
T PRK08636 143 VHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITF 222 (403)
T ss_pred EEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhcc
Confidence 9999875 3357888754 5656544568999999998 5788874 3589999999999999999998641 11
Q ss_pred cCcCCC--Ccc--CCc--EEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccch
Q 001531 774 VGLTSP--GYI--GAD--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPW 847 (1058)
Q Consensus 774 ~gl~~p--g~~--GaD--i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~ 847 (1058)
.+...| ..+ ..| |.+.++.|+|+.| |.++|++.+++++...+... +.....+.+..
T Consensus 223 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----GlRiG~iv~~~~li~~~~~~--------------~~~~~~~~~~~ 284 (403)
T PRK08636 223 DGYKTPSILEVEGAKDVAVESYTLSKSYNMA----GWRVGFVVGNKKLVGALKKI--------------KSWLDYGMFTP 284 (403)
T ss_pred CCCCCCChhcCCCccccEEEEEecccccCCc----cceeeeeeCCHHHHHHHHHH--------------HHHhcccCChH
Confidence 121111 111 123 3356788888544 78999999877665433110 00001111111
Q ss_pred hhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHH
Q 001531 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR 926 (1058)
Q Consensus 848 g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~ 926 (1058)
.+. +++ ..+. -..+-+++..+....+.+++.+.|++. +.+. .+.+..+ +++++++.. .+.+..++++.
T Consensus 285 ~q~---~~~-~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~p~~g~~--~~~~l~~~~--~~~~~~~l~~~ 353 (403)
T PRK08636 285 IQV---AAT-IALD-GDQSCVEEIRETYRKRRDVLIESFANAGWELQ--KPRASMF--VWAKIPEPA--RHLGSLEFSKQ 353 (403)
T ss_pred HHH---HHH-HHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHCCCccc--CCCcceE--EEEECCCcc--CCCCHHHHHHH
Confidence 121 111 1121 123334555555667778888888874 3322 2223222 466765210 02346788877
Q ss_pred HH-HCCccc-cCCCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 927 LM-DYGFHG-PTMSWP--VPGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 927 L~-~~Gi~~-~~~~~p--~~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
|. ++||.+ +...|. ..+.+||++. .+.+++++.++.|+++++.
T Consensus 354 ll~~~gV~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~~~rl~~~l~~ 400 (403)
T PRK08636 354 LLTEAKVAVSPGIGFGEYGDEYVRIALI--ENENRIRQAARNIKKFLKE 400 (403)
T ss_pred HHHhCCEEEecchhhCcCCCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 55 689875 333343 2478999996 4566777777666665543
No 414
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.54 E-value=2.7e-12 Score=152.83 Aligned_cols=328 Identities=15% Similarity=0.239 Sum_probs=198.9
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCC----ceeeecCchHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD----SFSLQPNAGAAGEYAGLMV 667 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~----~~~l~~~sGa~ge~a~lla 667 (1058)
..+|+|.+++..++..+......+.+. -+ + .+...++.+.|+++++.. ...+..++|++++++++..
T Consensus 70 ~~lGH~~p~v~~Ai~~q~~~~~~~~~~-~~-~-------~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~Alkl 140 (459)
T PRK06931 70 LALGHNHPDVLQSIQDVLTSGLPLHTL-DL-T-------TPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKL 140 (459)
T ss_pred ccCCCCCHHHHHHHHHHHhhhcccccc-cc-C-------CHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHH
Confidence 467888888777776653211111110 01 0 123457888899988532 2346668999999888888
Q ss_pred HHHHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCC------------cEEEEEcCCCCC--------CCCHHHH----HH
Q 001531 668 IRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG------------MKIVSVGTDAKG--------NINIEEL----RK 722 (1058)
Q Consensus 668 ir~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G------------~~vv~V~~d~~g--------~iD~e~L----~~ 722 (1058)
+|.|. +|++|| ...++||....+....| -.+..+|..... .-|.+.+ ++
T Consensus 141 Ar~~t------gr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (459)
T PRK06931 141 AKTYT------GRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFEN 214 (459)
T ss_pred HHHhc------CCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHH
Confidence 88762 345565 56789998876653211 123445442211 1123333 33
Q ss_pred HHHh---cCCCeEEEEEEcC-CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc--------CCcEE
Q 001531 723 AAEA---NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVC 787 (1058)
Q Consensus 723 ~i~~---~~~~taaV~vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~--------GaDi~ 787 (1058)
.+++ ..+++++|+++.- ...|++.+ .++++.++|++||+++|+|++ +.|+.+.|.+ -+||+
T Consensus 215 ~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV----~tGfGRtG~~~a~~~~gv~PDiv 290 (459)
T PRK06931 215 FIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEV----QAGFARTGKMFAFEHAGIEPDII 290 (459)
T ss_pred HHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc----hhcCCcCchHHHhhhcCCCCCEE
Confidence 3331 2346888888643 34566542 489999999999999999998 5667677643 36888
Q ss_pred EeCCccccccCCCCCCCceeEEEEeCCCCCCC-CCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001531 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL-PSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1058)
Q Consensus 788 ~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~l-pg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1058)
++ .|.+ ++|-| +|.+++++++ +.+ ++. ..+++.|+++.++++.+.|..+.++
T Consensus 291 t~--gK~l----~gG~P-i~av~~~~~~-~~~~~~~-------------------~~~T~~gnpla~aaala~L~~l~~~ 343 (459)
T PRK06931 291 VM--SKAV----GGGLP-LAVLGIKKEF-DAWQPGG-------------------HTGTFRGNQLAMATGLTTLKILKEE 343 (459)
T ss_pred Ee--cccc----cCCcc-eeeeeeHHHH-hhccCCC-------------------CCCCCCCCHHHHHHHHHHHHHHHhC
Confidence 77 4765 44545 5667777654 222 110 1112446778888888888888777
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCccceEEEEeccccccc------CC---CCHHHHHHHHHHCCc
Q 001531 867 GLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNT------AG---IEPEDVAKRLMDYGF 932 (1058)
Q Consensus 867 Gl~~~a~~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~~~~~------~g---~~~~~v~k~L~~~Gi 932 (1058)
++.+ +.....++|.++|+++ ++++ +.|. |.. . -+.+.+-... .. .-...+.+.|.++|+
T Consensus 344 ~l~~---~~~~~G~~l~~~L~~l~~~~~~i~~vrG~-Glm-~--giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv 416 (459)
T PRK06931 344 NLAQ---NAAERGEWLKAQLAELQKRYPCIGNVRGR-GLM-I--GIEIVDERQPADAMGSYPADGELAAAIQKACFENGL 416 (459)
T ss_pred CHHH---HHHHHHHHHHHHHHHHHHhCCCeEeEecC-ceE-E--EEEEccCcccccccccCCccHHHHHHHHHHHHHCCc
Confidence 6544 3445667888888764 3322 2232 322 1 1222100000 00 013467788889999
Q ss_pred cccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001531 933 HGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1058)
Q Consensus 933 ~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~ 973 (1058)
.+.... ...+++|+.|+...|++|||.++++|.+++.++-
T Consensus 417 l~~~~~-~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~ 456 (459)
T PRK06931 417 LLERGG-RNGNVVRLLPPLLITQAECEEFIDRFEQALLAAV 456 (459)
T ss_pred EEeecC-CCCCEEEEECCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 874321 1147899999999999999999999999987654
No 415
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.54 E-value=7.2e-13 Score=156.36 Aligned_cols=328 Identities=14% Similarity=0.134 Sum_probs=191.6
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCC-ceeeecCchHHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRA 670 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~-~~~l~~~sGa~ge~a~llair~ 670 (1058)
..+|++.+++..++..+. .......+ + . +...++.+.|+++++.. ...++.++|+++.++++..+|.
T Consensus 65 ~~lGh~~p~v~~ai~~q~-~~~~~~~~-~-~---------~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~ 132 (433)
T PRK00615 65 LIHGHSHPKICDAIQQGA-ERGTSYGL-T-S---------EQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARG 132 (433)
T ss_pred cccCCCCHHHHHHHHHHH-HhCCCCCC-C-C---------HHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHH
Confidence 357888887776666552 21111000 1 1 12447788888888654 2346678999988888888887
Q ss_pred HHHHcCCCCCCEEE-EcCCCCCccHH---HHHhCCc---EEEE-E--c-CCCC----CCCCHHHHHHHHHhcCCCeEEEE
Q 001531 671 YHKARGDHHRNVCI-IPVSAHGTNPA---TAAMCGM---KIVS-V--G-TDAK----GNINIEELRKAAEANRDNLSTLM 735 (1058)
Q Consensus 671 y~~~~G~~~r~~Vl-ip~saHg~~pa---~a~~~G~---~vv~-V--~-~d~~----g~iD~e~L~~~i~~~~~~taaV~ 735 (1058)
|. +|.+|+ +..++||.... .....+- .... . + ...+ ...|++++++.++++++++++|+
T Consensus 133 ~t------gr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI 206 (433)
T PRK00615 133 IT------GRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVI 206 (433)
T ss_pred hh------CCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEE
Confidence 62 345565 46789996521 1111110 0000 0 0 0000 11378999999987667788887
Q ss_pred EEcC-CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCc------c--CCcEEEeCCccccccCCCCCC
Q 001531 736 VTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY------I--GADVCHLNLHKTFCIPHGGGG 803 (1058)
Q Consensus 736 vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~------~--GaDi~~~s~hKtf~~P~g~GG 803 (1058)
++.. +..|.+.+ .+++|.++|++||+++|+|+++. |+ +.|. + -+|++++ .|.+ |+|.
T Consensus 207 ~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~t----G~-R~G~~ga~~~~gv~PDi~~~--gK~l----ggG~ 275 (433)
T PRK00615 207 FEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVT----GF-RVAQGGAAAIYHVKPDITVY--GKIL----GGGL 275 (433)
T ss_pred ECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccc----cc-cccHhHHHHhcCCCCCeEEE--cccc----cCCc
Confidence 7653 44576642 26799999999999999999963 33 3332 2 3688765 5766 3444
Q ss_pred CceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHH
Q 001531 804 PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMA 883 (1058)
Q Consensus 804 Pg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~ 883 (1058)
| +|.+++++++++.+... + ...+.+++.|+++.++++.+.|..+.++.+. ++...+.++|.
T Consensus 276 p-~~av~~~~~i~~~~~~~--~-------------~~~~~~T~~g~p~~~aa~la~L~~i~~~~~~---~~~~~~g~~l~ 336 (433)
T PRK00615 276 P-AAAVVAHKSIMDHLAPE--G-------------TIFQAGTLSGNPLAMAAGKASINLCREQGFY---TQLSTLEQNFL 336 (433)
T ss_pred c-eeeeeecHHHHhhhcCC--C-------------CcccCCCCcccHHHHHHHHHHHHHHhcccHH---HHHHHHHHHHH
Confidence 5 67788888776655211 0 0011112335667777888888888766543 34445677777
Q ss_pred HHHhcc-----CCeeeccCCCccceEEEEecccc---c---ccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCC
Q 001531 884 KRLEKH-----YPILFRGVNGTVAHEFIVDLRGL---K---NTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTES 952 (1058)
Q Consensus 884 ~~L~~~-----~~v~~~g~~~~~~~e~vv~~~~~---~---~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~ 952 (1058)
++|++. +++...+ .|..+ .+.+...+. . .........+.+.|.++|+.+....+| .. .++..
T Consensus 337 ~~l~~~~~~~g~~v~~~r-~G~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~---~~--~ls~~ 409 (433)
T PRK00615 337 SPIEEMIRSQGFPVSLVR-YGSMF-SFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSPFE---AS--FLSSA 409 (433)
T ss_pred HHHHHHHHHcCCCeEEEe-eceEE-EEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCcccc---cc--ceecC
Confidence 777653 3332222 22221 122221110 0 000001246888899999987544333 12 23445
Q ss_pred CCHHHHHHHHHHHHHHHHHHHH
Q 001531 953 ESKEELDRYCDALISIREEIAQ 974 (1058)
Q Consensus 953 ~t~eeid~fi~aL~~i~~e~~~ 974 (1058)
+|++|||++++++.++++.+-.
T Consensus 410 ht~~did~~~~a~~~~~~~~~~ 431 (433)
T PRK00615 410 HSMENLDYAQNVLIDSLEKVFS 431 (433)
T ss_pred CCHHHHHHHHHHHHHHHHHHhc
Confidence 7899999999999999887654
No 416
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.54 E-value=2.4e-12 Score=149.38 Aligned_cols=265 Identities=15% Similarity=0.098 Sum_probs=176.3
Q ss_pred HHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc-----
Q 001531 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL----- 288 (1058)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~----- 288 (1058)
.++++.+|+++|.++.++.+.+|++.+...++.++ . ++||+|+++...|+.+...+ +..|++++.++.
T Consensus 70 ~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~l-~--~~gd~vl~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~ 142 (367)
T PRK02731 70 FELKAALAEKFGVDPERIILGNGSDEILELLARAY-L--GPGDEVIYSEHGFAVYPIAA----QAVGAKPVEVPAKDYGH 142 (367)
T ss_pred HHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHh-c--CCCCEEEEecCCHHHHHHHH----HHcCCeEEEecccCCCC
Confidence 36778999999998888888888887766655554 2 37899999998887665543 346888887764
Q ss_pred --hhhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhc--CcEEEEEeccccccCCCC---C----Ccccc-eEEEe
Q 001531 289 --KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN--GVKVVMATDLLALTILKP---P----GELGA-DIVVG 354 (1058)
Q Consensus 289 --~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~--galliV~a~~~slg~l~~---p----~~~Ga-Divvg 354 (1058)
+++++ +++++++|++.+| |.+|.+.|.++|.++++.. |+++++| +......... + .+.+- .|+++
T Consensus 143 ~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~D-e~y~~~~~~~~~~~~~~~~~~~~~~i~~~ 221 (367)
T PRK02731 143 DLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLD-EAYAEYVRRKDYEDGLELVAKFPNVVVTR 221 (367)
T ss_pred CHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEE-CcHHHhccCcCcccHHHHHhhcCCEEEEe
Confidence 34555 6778899999988 6899999999999999875 8888884 3322211110 0 01112 34555
Q ss_pred cC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHH
Q 001531 355 SA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1058)
Q Consensus 355 s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~ 433 (1058)
|. |.||.| |..+||+++++++++.+.. .+.+.++++ .+..++.
T Consensus 222 S~SK~~g~~----G~RiG~l~~~~~~~~~l~~----------------------------~~~~~~~~~----~~~~~a~ 265 (367)
T PRK02731 222 TFSKAYGLA----GLRVGYGIAPPEIIDALNR----------------------------VRQPFNVNS----LALAAAV 265 (367)
T ss_pred eehHhhcCc----ccceeeeeCCHHHHHHHHH----------------------------ccCCCCCCH----HHHHHHH
Confidence 65 777532 4456999998887765510 001112221 1122222
Q ss_pred HHHHhC-cccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC---HHHHHHHHHHcCceeeecc----CC
Q 001531 434 YAVYHG-PEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVVD----SN 505 (1058)
Q Consensus 434 yl~~~g-~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~---~~~l~~~L~~~GI~~~~~~----~~ 505 (1058)
.++. .+.++++.++..++.+++.+.|++.| +++... ...-+.+.++. +.++.+.|.++||.++... ++
T Consensus 266 --~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-~g~~~~i~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~ 341 (367)
T PRK02731 266 --AALDDDAFVEKSRALNAEGMAWLTEFLAELG-LEYIPS-VGNFILVDFDDGKDAAEAYQALLKRGVIVRPVAGYGLPN 341 (367)
T ss_pred --HHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-CccCCC-CceEEEEECCCCCCHHHHHHHHHHCCEEEEeCCCCCCCC
Confidence 1222 23467777888888899999999886 766531 11224455532 7899999999999886542 46
Q ss_pred eEEEEeccCCCHHHHHHHHHHHhC
Q 001531 506 TVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 506 ~lris~~~~~t~edid~ll~al~~ 529 (1058)
.+|+|++ +.+|+++++++|..
T Consensus 342 ~iRis~~---~~~e~~~l~~aL~~ 362 (367)
T PRK02731 342 ALRITIG---TEEENRRFLAALKE 362 (367)
T ss_pred eEEEecC---CHHHHHHHHHHHHH
Confidence 8999985 78999999999863
No 417
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.54 E-value=1.9e-12 Score=139.49 Aligned_cols=309 Identities=18% Similarity=0.176 Sum_probs=193.4
Q ss_pred HHHHHHHHHHHHHHHhCCCceeeecCchHHHHH-HHHHHHHHHHHHcCCCCCCEEEEcCCCC-CccHHH----HHhCCcE
Q 001531 630 YQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEY-AGLMVIRAYHKARGDHHRNVCIIPVSAH-GTNPAT----AAMCGMK 703 (1058)
Q Consensus 630 ~~~~~~el~~~lael~G~~~~~l~~~sGa~ge~-a~llair~y~~~~G~~~r~~Vlip~saH-g~~pa~----a~~~G~~ 703 (1058)
+..+=..+-.+|+-|.|.....+....++..+. ..|.+ +|+. ..++.||++...- .+.... +.+.|..
T Consensus 74 W~~lp~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~a--alr~----~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~ 147 (407)
T COG3844 74 WFDLPERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAA--ALRP----QEGRRVIVSEGDNFPTDLYIAEGLADLLGIG 147 (407)
T ss_pred hhhchhHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHH--Hhcc----CCCceEEeecCCCCCcchhhhcchhhhhccc
Confidence 334444567889999998764433434443342 22222 2222 2245677776432 222111 3344432
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCC-cccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc
Q 001531 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (1058)
Q Consensus 704 vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~-~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~ 782 (1058)
.+-.+.+++++++++++ ++++.|++++-|+ +|..- |+.+|.+++|++|+++..|=||..+...+ .-..+
T Consensus 148 -----~~~~~~~~P~~~~~~~~---dd~AvV~L~~V~y~TGql~-dm~aiT~~AH~~galv~wDLAHsaGavp~-~Lh~~ 217 (407)
T COG3844 148 -----YDLEGVIAPRALEEAIT---DDVAVVLLSHVNYKTGQLL-DMRAITALAHQHGALVGWDLAHSAGAVPV-DLHAA 217 (407)
T ss_pred -----ccceeeeChHHHHHhhc---cceEEEEecccccccccee-eHHHHHHHHHhcCceEEeehhcccCCcce-eeccc
Confidence 33446788899999997 9999999999885 89988 89999999999999999998876433322 22467
Q ss_pred CCcEEEeCCccccccCCCCCCCc-eeEEEEeCC-CCCCCCCCCcccCCCC-----CC-CC-CCCCCCCCCccchhhHHHH
Q 001531 783 GADVCHLNLHKTFCIPHGGGGPG-MGPIGVKKH-LAPFLPSHPVVSTGGI-----PA-PE-KSQPLGTIAAAPWGSALIL 853 (1058)
Q Consensus 783 GaDi~~~s~hKtf~~P~g~GGPg-~G~i~~~~~-l~~~lpg~~vg~~~d~-----g~-~~-~~~~t~~i~sa~~g~~~~~ 853 (1058)
|+|+.+++.||.+. |||| .+++++.++ ..+..|. .-||.+-. ++ +. ..-...-.|+++ +...+
T Consensus 218 gaDfaigcsyKYLN-----gGPGapa~l~v~~~h~e~~~~~-lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~--~V~s~ 289 (407)
T COG3844 218 GADFAIGCSYKYLN-----GGPGAPAGLFVAPRHRERSWPP-LSGWWGHARPFAMEEVYAPGPGARRFLCGTQ--PVLSL 289 (407)
T ss_pred CCCeeeeeeceecc-----CCCCCceeEEeccccccccccc-cccccCCCCcchhhhccCcCccccceeeCCc--chhhh
Confidence 99999999999995 7884 677777754 4444442 23332200 00 00 000111223321 11112
Q ss_pred HHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCeeeccCCCc--cceEEEEecccccccCCCCHHHHHHHHH
Q 001531 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRGVNGT--VAHEFIVDLRGLKNTAGIEPEDVAKRLM 928 (1058)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~---~~v~~~g~~~~--~~~e~vv~~~~~~~~~g~~~~~v~k~L~ 928 (1058)
++--..+.....-++.++.++.+..++|+.+.++.. |.+...+|... .-..+.+.. -...+|.+.|.
T Consensus 290 aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~h--------p~~~~V~qaLi 361 (407)
T COG3844 290 AALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYH--------PHGYQVMQALI 361 (407)
T ss_pred HHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEec--------CcHHHHHHHHH
Confidence 222334556667778899999999999999988764 33322222110 001122322 25789999999
Q ss_pred HCCccccCCCCCCCCEEEEEcCC-CCCHHHHHHHHHHHHHHHHHHH
Q 001531 929 DYGFHGPTMSWPVPGTLMIEPTE-SESKEELDRYCDALISIREEIA 973 (1058)
Q Consensus 929 ~~Gi~~~~~~~p~~~~Lris~te-~~t~eeid~fi~aL~~i~~e~~ 973 (1058)
++|+..- |..|+.||+.||+ +++-.|+-..+++|.+++++..
T Consensus 362 ~rGVigD---~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~a 404 (407)
T COG3844 362 DRGVIGD---FREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTLA 404 (407)
T ss_pred HcCcccc---ccCCCeeeecCccceechhHHHHHHHHHHHHHHhhc
Confidence 9999763 3337999999998 6788999999999999987643
No 418
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.54 E-value=4.8e-13 Score=155.15 Aligned_cols=303 Identities=18% Similarity=0.156 Sum_probs=179.3
Q ss_pred HHHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCC-
Q 001531 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA- 711 (1058)
Q Consensus 633 ~~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~- 711 (1058)
...++++.+++.+|...+ +.+++|+.|...+|.++ |.+++++|++|.-............|+++|.+++|+
T Consensus 26 ~~~~fE~~~a~~~g~~~~-~~~~sgt~Al~~al~~l-------~~~~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~ 97 (363)
T PF01041_consen 26 YVEEFEKEFAEYFGVKYA-VAVSSGTSALHLALRAL-------GLGPGDEVIVPAYTFPATASAILWAGAEPVFVDIDPE 97 (363)
T ss_dssp HHHHHHHHHHHHHTSSEE-EEESSHHHHHHHHHHHT-------TGGTTSEEEEESSS-THHHHHHHHTT-EEEEE-BETT
T ss_pred HHHHHHHHHHHHhCCCeE-EEeCChhHHHHHHHHhc-------CCCcCceEecCCCcchHHHHHHHHhccEEEEEeccCC
Confidence 466899999999998876 55667776554443332 334678999997643333344668999999999994
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCcccccCc-CCCCccCCcEEEeC
Q 001531 712 KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIGADVCHLN 790 (1058)
Q Consensus 712 ~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl-~~pg~~GaDi~~~s 790 (1058)
++.+|+++++++|+ ++|++|++++ .+|..- |+++|.++|+++|+.|+-|+|+..+..-- ...|.+| |+.++|
T Consensus 98 ~~~id~~~~~~~i~---~~t~ai~~~h--~~G~~~-d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~g-d~~~fS 170 (363)
T PF01041_consen 98 TLNIDPEALEKAIT---PKTKAILVVH--LFGNPA-DMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFG-DIAIFS 170 (363)
T ss_dssp TSSB-HHHHHHHHH---TTEEEEEEE---GGGB----HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSS-SEEEEE
T ss_pred cCCcCHHHHHHHhc---cCccEEEEec--CCCCcc-cHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCC-CceEec
Confidence 59999999999998 8999999975 668887 89999999999999999999986422111 2346666 999999
Q ss_pred CccccccCCCCCCCceeEEEEeC-CCCCCCCC-CCcccCCCC-CCCCCCC-CCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001531 791 LHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPS-HPVVSTGGI-PAPEKSQ-PLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1058)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~~~~-~l~~~lpg-~~vg~~~d~-g~~~~~~-~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1058)
+|.+=.++.|. +|+|++++ ++.+++.- +..|...+. ....... ...|... +...++.+...|.
T Consensus 171 f~~~K~i~~ge----GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm----~~~~AAigl~QL~----- 237 (363)
T PF01041_consen 171 FHPTKIITTGE----GGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRM----SELQAAIGLAQLK----- 237 (363)
T ss_dssp SSTTSSS-SSS-----EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-----BHHHHHHHHHHHH-----
T ss_pred CCCCCCCcCCC----CeeEEecHHHHHHHhhhhhccCcCccccccccccccCCccccc----HHHHHHHHHHHHH-----
Confidence 87432223332 47888885 33222110 000110000 0000000 0112221 1222222333332
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCee-eccCCC---ccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCC----
Q 001531 867 GLTEASKIAILNANYMAKRLEKHYPIL-FRGVNG---TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS---- 938 (1058)
Q Consensus 867 Gl~~~a~~~~~~a~yL~~~L~~~~~v~-~~g~~~---~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~---- 938 (1058)
-+.+..++..++++++.+.|++...+. ...+.+ ...+.+.+.+++. ...+.+++.+.|.++||.....+
T Consensus 238 ~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~---~~~~rd~l~~~L~~~GI~~~~~~~~pl 314 (363)
T PF01041_consen 238 RLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDE---ALADRDELVEALRARGIETRPHYPKPL 314 (363)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCC---GCSTHHHHHHHHHHTTBEEBCSTSSCG
T ss_pred HhhhhHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccccc---ccchHHHHHHHHHHCCCcccccccCch
Confidence 345555566678889999998863331 111111 2344555655421 11367899999999999764322
Q ss_pred ----------------CCC-----CCEEEEEcCCCCCHHHHHHHHHHHH
Q 001531 939 ----------------WPV-----PGTLMIEPTESESKEELDRYCDALI 966 (1058)
Q Consensus 939 ----------------~p~-----~~~Lris~te~~t~eeid~fi~aL~ 966 (1058)
+|. ...|.+-.....+++|+++++++|+
T Consensus 315 ~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 315 HRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp GGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred hhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 110 1356777777889999999999875
No 419
>PRK05939 hypothetical protein; Provisional
Probab=99.54 E-value=1.8e-12 Score=151.71 Aligned_cols=142 Identities=16% Similarity=0.187 Sum_probs=117.0
Q ss_pred HHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---h
Q 001531 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 289 (1058)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~---~ 289 (1058)
..++++.+|+|.|.+. +.++.+|++++.++++++ . ++||+||+++..|+++...+.. ++..|+++++++. +
T Consensus 49 ~~~lE~~la~leg~~~--~v~~ssG~~Ai~~~l~al-l--~~Gd~Vv~~~~~y~~t~~~~~~-l~~~G~~v~~v~~~d~e 122 (397)
T PRK05939 49 TAALEAKITKMEGGVG--TVCFATGMAAIAAVFLTL-L--RAGDHLVSSQFLFGNTNSLFGT-LRGLGVEVTMVDATDVQ 122 (397)
T ss_pred HHHHHHHHHHHhCCCe--EEEeCCHHHHHHHHHHHH-c--CCCCEEEECCCccccHHHHHHH-HHhcCCEEEEECCCCHH
Confidence 4457789999999876 678889999988888776 3 3899999999999988777655 3568999999876 4
Q ss_pred hhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-ccccc
Q 001531 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGV 361 (1058)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~ 361 (1058)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|| +.++.+....|.++|+||+++|. |.|++
T Consensus 123 ~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD-~t~a~~~~~~~~~~gaDivv~S~sK~~~g 196 (397)
T PRK05939 123 NVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVD-NTMTSPWLFRPKDVGASLVINSLSKYIAG 196 (397)
T ss_pred HHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEE-CCcccccccCccccCCEEEEecCeecccC
Confidence 5666 7889999999887 78999999999999999999999994 34555555567789999999998 87764
No 420
>PLN02242 methionine gamma-lyase
Probab=99.54 E-value=5.1e-13 Score=157.10 Aligned_cols=261 Identities=18% Similarity=0.210 Sum_probs=169.4
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHH-----HhCCcEEEEEc
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA-----AMCGMKIVSVG 708 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a-----~~~G~~vv~V~ 708 (1058)
..++++.++++.|.+.+. ..++|.++..++++++. +++++|+++...++.+...+ ...|++++.++
T Consensus 78 ~~~LE~~lA~l~g~~~~l-~~~sG~~Ai~~al~al~--------~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d 148 (418)
T PLN02242 78 VLNLGRQMAALEGTEAAY-CTASGMSAISSVLLQLC--------SSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVD 148 (418)
T ss_pred HHHHHHHHHHHhCCCeEE-EEccHHHHHHHHHHHHh--------CCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcC
Confidence 457899999999998764 45677766644444332 25688999887655444332 35788888887
Q ss_pred CCCCCCCCHHHHHHHHHhcCC-CeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcE
Q 001531 709 TDAKGNINIEELRKAAEANRD-NLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 786 (1058)
Q Consensus 709 ~d~~g~iD~e~L~~~i~~~~~-~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi 786 (1058)
. .|+++++++++ + ++++|++++| |.+|.+. |+++|+++||++|+++++|.++. . ....|..+|+||
T Consensus 149 ~-----~d~e~l~~~i~---~~~tklV~lesp~NPtG~v~-dl~~I~~la~~~gi~livDea~~--~-~~~~~~~~g~di 216 (418)
T PLN02242 149 I-----TDLEAVKKAVV---PGKTKVLYFESISNPTLTVA-DIPELARIAHEKGVTVVVDNTFA--P-MVLSPARLGADV 216 (418)
T ss_pred C-----CCHHHHHHhcC---cCCCEEEEEecCCCCCCccc-CHHHHHHHHHHhCCEEEEECCCC--c-cCCCHHHcCCcE
Confidence 5 38999999996 5 5999999999 5689987 89999999999999999999863 1 223566779999
Q ss_pred EEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001531 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1058)
Q Consensus 787 ~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1058)
++.+++|+|+.+ |...+|++++++++...+..... .+....+. +. . . -.+++...+.+
T Consensus 217 vv~S~SK~l~g~---g~~~gG~iv~~~~li~~l~~~~~---------~~~~~~g~-~~----~---~--~~A~l~~~~l~ 274 (418)
T PLN02242 217 VVHSISKFISGG---ADIIAGAVCGPAELVNSMMDLHH---------GALMLLGP-TM----N---P--KVAFELSERLP 274 (418)
T ss_pred EEEeCccccCCC---CCceEEEEEcCHHHHHHHHHHhh---------hhhhccCC-CC----C---H--HHHHHHHcCCC
Confidence 999999998522 22236889888765544321000 00000111 11 0 1 12233444555
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHH--CCccccCCCCCCCC
Q 001531 867 GLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD--YGFHGPTMSWPVPG 943 (1058)
Q Consensus 867 Gl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~--~Gi~~~~~~~p~~~ 943 (1058)
-+..+.++..+++.++++.|+++ +.+.|+|-. .-...+++++.+. .| | .+
T Consensus 275 tl~~r~~~~~~~a~~la~~L~~~~~~V~yP~l~------------------~~p~~~~~~~~~~~~~g-------~--g~ 327 (418)
T PLN02242 275 HLSLRMKEHCRRAMEYAKRMKELGLKVIYPGLE------------------DHPQHALLKSMANKGYG-------F--GG 327 (418)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCEEECCCCC------------------CCccHHHHHHhcccCCC-------c--ee
Confidence 56666677889999999999986 445443310 1123466666542 12 1 23
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHH
Q 001531 944 TLMIEPTESESKEELDRYCDALIS 967 (1058)
Q Consensus 944 ~Lris~te~~t~eeid~fi~aL~~ 967 (1058)
.+-|.+ . ++++..+|++.|+-
T Consensus 328 ~~sf~l--~-~~~~~~~f~~~l~~ 348 (418)
T PLN02242 328 LLCLDM--D-TEERANRLMRYLQN 348 (418)
T ss_pred EEEEEE--C-CHHHHHHHHHHhhc
Confidence 344444 3 57888999999873
No 421
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.54 E-value=5.1e-13 Score=156.37 Aligned_cols=217 Identities=16% Similarity=0.159 Sum_probs=145.9
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHH----HHHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa----~a~~~G~~vv~V~~ 709 (1058)
..+++++++++.|.+.+ +..++|.++...++.++. .++++|+++...|+.... .+...|++++.++.
T Consensus 66 ~~~le~~lA~l~g~~~~-i~~ssG~~Ai~~~l~all--------~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~ 136 (398)
T PRK08249 66 VQAFEEKVRILEGAEAA-TAFSTGMAAISNTLYTFL--------KPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCET 136 (398)
T ss_pred HHHHHHHHHHHhCCCeE-EEeCChHHHHHHHHHHhc--------CCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCC
Confidence 45789999999998765 556677655533333321 256789998876654321 24568999888764
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++.... ...|..+|+|+++
T Consensus 137 -----~d~e~l~~~i~---~~tklV~ie~p~NPtg~v~-dl~~I~~la~~~gi~livD~t~a~~~--~~~~l~~~~Divv 205 (398)
T PRK08249 137 -----GDHEQIEAEIA---KGCDLLYLETPTNPTLKIV-DIERLAAAAKKVGALVVVDNTFATPI--NQNPLALGADLVI 205 (398)
T ss_pred -----CCHHHHHHhcC---CCCeEEEEECCCCCCCccC-CHHHHHHHHHHcCCEEEEECCcCccc--cCCchhhCCCEEe
Confidence 68999999996 789999999995 789887 89999999999999999999864222 2346568999999
Q ss_pred eCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhH
Q 001531 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl 868 (1058)
.+++|+|+.+ |.-..|+++.++++.+.+... + ...+. +.++ . .+| +...|-+-+
T Consensus 206 ~S~sK~l~g~---~~~~gG~vv~~~~l~~~l~~~------------~-~~~g~-~~s~----~---~a~--l~l~~l~tL 259 (398)
T PRK08249 206 HSATKFLSGH---ADALGGVVCGSKELMEQVYHY------------R-EINGA-TMDP----M---SAY--LILRGMKTL 259 (398)
T ss_pred ccCceecCCC---CCceEEEEECCHHHHHHHHHH------------H-HhcCC-CCCH----H---HHH--HHHhCcchH
Confidence 9999998521 111247777665554433100 0 00111 1111 1 122 333455556
Q ss_pred HHHHHHHHHHHHHHHHHHhcc---CCeeecc
Q 001531 869 TEASKIAILNANYMAKRLEKH---YPILFRG 896 (1058)
Q Consensus 869 ~~~a~~~~~~a~yL~~~L~~~---~~v~~~g 896 (1058)
....++..+++..+++.|+++ -.|.|+|
T Consensus 260 ~~R~~~~~~na~~la~~L~~~p~v~~V~yP~ 290 (398)
T PRK08249 260 KLRVRQQQESAMALAKYLQTHPKVEAVYYPG 290 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCeeEEECCC
Confidence 666778889999999999975 2355665
No 422
>PRK06148 hypothetical protein; Provisional
Probab=99.54 E-value=1.1e-12 Score=169.37 Aligned_cols=328 Identities=17% Similarity=0.213 Sum_probs=201.7
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCC-ceeeecCchHHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRA 670 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~-~~~l~~~sGa~ge~a~llair~ 670 (1058)
..+|++.+.+..++..+. ....+.+ -|. .+...++.+.|++++..+ ...++.+||++++++++..+|.
T Consensus 634 ~~lGH~hp~v~~Ai~~q~-~~l~~~~--~~~--------~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr~ 702 (1013)
T PRK06148 634 CHVGHAHPRVVAAAARQA-ARLNTNT--RYL--------HDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLARA 702 (1013)
T ss_pred hhcCCCCHHHHHHHHHHH-hhcCCcC--CcC--------CHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHH
Confidence 467888877776666653 2111111 111 123457888899988532 2347788999999888888887
Q ss_pred HHHHcCCCCCCEEE-EcCCCCCccHHHHHhCC------------cEEEEEcCCCC-----CCCC-------HHHHHHHHH
Q 001531 671 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCG------------MKIVSVGTDAK-----GNIN-------IEELRKAAE 725 (1058)
Q Consensus 671 y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G------------~~vv~V~~d~~-----g~iD-------~e~L~~~i~ 725 (1058)
| . +|++|| +..++||....+....| -.+..++.... +..| .+++++.++
T Consensus 703 ~---t---Gr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~ 776 (1013)
T PRK06148 703 H---T---GQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIA 776 (1013)
T ss_pred h---c---CCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHH
Confidence 6 2 234455 56789997654432211 01222221100 1011 245666554
Q ss_pred ---hcCCCeEEEEEEcC-CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCc-------cC--CcEEEe
Q 001531 726 ---ANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY-------IG--ADVCHL 789 (1058)
Q Consensus 726 ---~~~~~taaV~vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~-------~G--aDi~~~ 789 (1058)
.+++++++|+++.- ...|++.+ .++++.++|+++|+++|+|++ +.|+.+.|. +| +||+++
T Consensus 777 ~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEV----qtGfGRtG~~~~a~e~~gv~PDivt~ 852 (1013)
T PRK06148 777 AMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEV----QVGFGRVGSHWWAFETQGVVPDIVTM 852 (1013)
T ss_pred hhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEec----ccCCCCCCCcchhhhhcCCCcceeee
Confidence 23467888888753 34566642 489999999999999999998 456666663 23 688876
Q ss_pred CCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHH
Q 001531 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1058)
Q Consensus 790 s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1058)
.|.+ |+|-| +|.+++++++++.+.... ...+ ++.|+++.++++.+.|..+-++++.
T Consensus 853 --gK~l----ggG~P-lgav~~~~ei~~~~~~g~----------------~~~~-Tf~gnpla~aaa~a~L~~i~~e~l~ 908 (1013)
T PRK06148 853 --GKPI----GNGHP-MGAVVTTREIADSFDNGM----------------EYFN-TFGGNPVSCAIGLAVLDIIEDEDLQ 908 (1013)
T ss_pred --cccc----cCCcc-eEEEEEcHHHHhhccCCC----------------cccc-CCCCCHHHHHHHHHHHHHHhhccHH
Confidence 4765 44544 777778877765442110 0012 2556788888888999988777655
Q ss_pred HHHHHHHHHHHHHHHHHhcc---CCee--eccCCCccceEEEEeccc--ccccC-CCCHHHHHHHHHHCCccccCCCCCC
Q 001531 870 EASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRG--LKNTA-GIEPEDVAKRLMDYGFHGPTMSWPV 941 (1058)
Q Consensus 870 ~~a~~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~--~~~~~-g~~~~~v~k~L~~~Gi~~~~~~~p~ 941 (1058)
+. +.+..++|+++|+++ ++++ +.|. |... -+.+.. -..+. ......+.++|.++|+.+.... |.
T Consensus 909 ~~---~~~~G~~l~~~L~~l~~~~~~i~~VrG~-Gl~~---gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-~~ 980 (1013)
T PRK06148 909 RN---ALEIGNYLLAGLRELQDRFDIIGDVRGM-GLFL---GIELVTDRKTKAPATAIARYVKNGARERGILIGTEG-PH 980 (1013)
T ss_pred HH---HHHHHHHHHHHHHHHHHhCCCceEEeee-ceEE---EEEecCCccccCccHHHHHHHHHHHHhCCeEEeccC-CC
Confidence 43 446678888888764 3332 2232 3221 122210 00000 0113568888999999975432 22
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 942 PGTLMIEPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 942 ~~~Lris~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
.+.|||.|+..+|++|||+++++|.+++.++
T Consensus 981 ~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 981 DNVLKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred CCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 5889999999999999999999999998764
No 423
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.54 E-value=4.8e-14 Score=158.73 Aligned_cols=153 Identities=18% Similarity=0.264 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---
Q 001531 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--- 288 (1058)
Q Consensus 212 ~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~--- 288 (1058)
.+.++|+.+|+++|.+.+ ..+.+|+|.++.++++++. ++||+|++++.+|+++...++. .|++++++++
T Consensus 60 ~i~~~~~~~A~~~ga~~~-~~~~~Gst~a~~~~l~al~---~~gd~Vlv~~~~h~s~~~~~~~----~g~~~~~v~~~~~ 131 (294)
T cd00615 60 PIKEAQELAARAFGAKHT-FFLVNGTSSSNKAVILAVC---GPGDKILIDRNCHKSVINGLVL----SGAVPVYLKPERN 131 (294)
T ss_pred HHHHHHHHHHHHhCCCCE-EEEcCcHHHHHHHHHHHcC---CCCCEEEEeCCchHHHHHHHHH----CCCEEEEecCccC
Confidence 577899999999998752 2246788888888888763 3899999999999999988753 4666666532
Q ss_pred -----------hhhhc-c--CCCEeEEEEEcCCCceeeccHHHHHHHHHhcCcEEEEEeccccc-----cCCC-CCCccc
Q 001531 289 -----------KDIDY-K--SGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLAL-----TILK-PPGELG 348 (1058)
Q Consensus 289 -----------~~l~~-l--~~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~sl-----g~l~-~p~~~G 348 (1058)
+++++ + .+++++|++++||++|.+.|+++|+++||++|++++|| +.++. +.+. ...++|
T Consensus 132 ~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p~~~G~~~dl~~I~~~~~~~g~~livD-eA~~~~~~~~~~~~~~~~~~~ 210 (294)
T cd00615 132 PYYGIAGGIPPETFKKALIEHPDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVD-EAHGAHFRFHPILPSSAAMAG 210 (294)
T ss_pred cccCcCCCCCHHHHHHHHHhCCCceEEEEECCCCCCEecCHHHHHHHHHhcCCeEEEE-CcchhhhccCcccCcchhhcC
Confidence 34555 4 35789999999999999999999999999999999994 23332 1111 224579
Q ss_pred ceEEEecC-cccccccCCCCCceEEEEEehh
Q 001531 349 ADIVVGSA-QRFGVPMGYGGPHAAFLATSQE 378 (1058)
Q Consensus 349 aDivvgs~-k~lg~P~~~GGP~~G~l~~~~~ 378 (1058)
+|++++|+ |++++| +++|+++++++
T Consensus 211 ~div~~S~hK~l~g~-----~~~~~l~~~~~ 236 (294)
T cd00615 211 ADIVVQSTHKTLPAL-----TQGSMIHVKGD 236 (294)
T ss_pred CcEEEEchhcccchH-----hHHHHHHhCCC
Confidence 99999999 766433 23466666544
No 424
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.54 E-value=1.2e-12 Score=153.42 Aligned_cols=217 Identities=18% Similarity=0.238 Sum_probs=144.6
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCcc----HHHHHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTN----PATAAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~----pa~a~~~G~~vv~V~~ 709 (1058)
..++++.++++.|.+.. +..++|.++. .++++.+. .++++|+++...++.. ...+...|++++.++.
T Consensus 62 ~~~Le~~lA~l~g~~~~-v~~~sG~~Ai---~~~l~all-----~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~ 132 (405)
T PRK08776 62 RDLLGEALAELEGGAGG-VITATGMGAI---NLVLNALL-----QPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL 132 (405)
T ss_pred HHHHHHHHHHHhCCCce-EEEcCHHHHH---HHHHHHHh-----CCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC
Confidence 45788999999997643 5666676544 33333332 2567899876655432 1224567889888875
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
.|+++|+++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++.. +....|.++|+|+++
T Consensus 133 -----~d~~~l~~~i~---~~tklV~l~~P~NPtG~v~-dl~~I~~la~~~gi~vIvD~a~a~--~~~~~pl~~gaDivv 201 (405)
T PRK08776 133 -----TDPRSLADALA---QSPKLVLIETPSNPLLRIT-DLRFVIEAAHKVGALTVVDNTFLS--PALQKPLEFGADLVL 201 (405)
T ss_pred -----CCHHHHHHhcC---cCCeEEEEECCCCCCCccC-CHHHHHHHHHHcCCEEEEECCCcc--cccCCcccccCCEEE
Confidence 48999999996 78999999999 5789987 899999999999999999998753 234567789999999
Q ss_pred eCCccccccCCCCCCCceeEEEEe-CCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001531 789 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~G~i~~~-~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1058)
.|+||+|+.| |+-.+|.++++ +++.+.+-.. + ...+ .+.+++. +|. ...|-+-
T Consensus 202 ~S~tK~l~g~---~~~~~G~vv~~~~~l~~~l~~~------------~-~~~g-~~~s~~~-------a~l--~~~gl~t 255 (405)
T PRK08776 202 HSTTKYINGH---SDVVGGAVVARDAELHQQLVWW------------A-NALG-LTGSPFD-------AFL--TLRGLRT 255 (405)
T ss_pred ecCceeecCC---CCceEEEEEeCCHHHHHHHHHH------------H-HhcC-CCCCHHH-------HHH--HHhhhCc
Confidence 9999999522 12225666665 3443322100 0 0011 1111211 222 2345555
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC---Ceeecc
Q 001531 868 LTEASKIAILNANYMAKRLEKHY---PILFRG 896 (1058)
Q Consensus 868 l~~~a~~~~~~a~yL~~~L~~~~---~v~~~g 896 (1058)
+..+.++...|+..+++.|+++. .|.|++
T Consensus 256 l~~r~~~~~~na~~la~~L~~~p~v~~V~yP~ 287 (405)
T PRK08776 256 LDARLRVHQENADAIAALLDGHAAVNQVYYPG 287 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCC
Confidence 66777888899999999998752 344554
No 425
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.53 E-value=1.8e-12 Score=152.28 Aligned_cols=319 Identities=18% Similarity=0.238 Sum_probs=196.0
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCC--
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-- 711 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~-- 711 (1058)
+.+|++.+++++|.+.+ +.+++|+.|+...++++- +++++| ++.+...++.....+.|.+++.+++++
T Consensus 55 ~~~Leeaia~~~g~~~v-v~t~~Gt~Al~la~~al~--------~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~ 124 (431)
T cd00617 55 FYDLEDAVQDLFGFKHI-IPTHQGRGAENILFSILL--------KPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAH 124 (431)
T ss_pred HHHHHHHHHHHHCCCeE-EEcCCHHHHHHHHHHHhC--------CCCCEE-ccCCcccchHHHHHhCCCEeEEEeccccc
Confidence 45788899999999865 566678777754433321 256766 565433345556788999999999863
Q ss_pred --------CCCCCHHHHHHHHHhc-CCCeEEEEEEcCCC-c-cccc--ccHHHHHHHHHHcCCEEEEeccCcc--ccc--
Q 001531 712 --------KGNINIEELRKAAEAN-RDNLSTLMVTYPST-H-GVYE--EGIDEICKIIHDNGGQVYMDGANMN--AQV-- 774 (1058)
Q Consensus 712 --------~g~iD~e~L~~~i~~~-~~~taaV~vt~Pn~-~-G~i~--~dI~eI~~lah~~g~lv~vD~a~~~--al~-- 774 (1058)
.|++|+++|+++|++. .+++++|++++|+. + |..- +++++|+++|++||++|+.|+|+.. +..
T Consensus 125 ~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~ 204 (431)
T cd00617 125 DAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIK 204 (431)
T ss_pred ccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhh
Confidence 2669999999999742 23588999999964 4 6653 3588999999999999999999652 221
Q ss_pred ----CcC--CCCc------cCCcEEEeCCccccccCCCCCCCceeEEEEeC-CCCCCCCCCCcccCCCCCCCCCCCCCCC
Q 001531 775 ----GLT--SPGY------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGT 841 (1058)
Q Consensus 775 ----gl~--~pg~------~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~-~l~~~lpg~~vg~~~d~g~~~~~~~t~~ 841 (1058)
+.. ++++ -..|.+++++||.++. |-+|++++++ ++...+....+... .....+.
T Consensus 205 ~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~------~~GG~i~~~d~~l~~~~~~~~~~~~-------~~~~~gG 271 (431)
T cd00617 205 EREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLV------NIGGFLALRDDELYEEARQRVVLYE-------GFVTYGG 271 (431)
T ss_pred cccccccCCCHHHHHHHhhccCCEEEEEeecCCCC------ccceEEEeCcHHHHHHHHHhccccC-------Ccccccc
Confidence 211 1222 1479999999998754 3357899986 46554321110000 0000011
Q ss_pred CCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEeccccccc---CC
Q 001531 842 IAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNT---AG 917 (1058)
Q Consensus 842 i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~---~g 917 (1058)
++ +. - +.+....+... .+ . +..+..+.+++||.+.|.+. +++.. |.+ .|-+.+|.+.+... .+
T Consensus 272 ~~----~r-~-~~A~A~gL~e~-~~-~-~~l~~~~~~r~~l~~~L~~~G~~v~~--P~G--gh~v~~d~~~~~~~~~~~~ 338 (431)
T cd00617 272 MA----GR-D-MEALAQGLREA-VE-E-DYLRHRVEQVRYLGDRLDEAGVPIVE--PAG--GHAVFIDAREFLPHIPQEQ 338 (431)
T ss_pred cc----HH-H-HHHHHHHHHhc-cc-H-HHHHHHHHHHHHHHHHHHHCCCCccC--CCc--ceEEEEEhHHhcCCCCccc
Confidence 11 11 1 11111111110 11 1 23344556779999999985 65542 333 35577887654211 12
Q ss_pred CCHHHHHHHHH-HCCccc---cCCCC---C--------CCCEEEEEcCC-CCCHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 001531 918 IEPEDVAKRLM-DYGFHG---PTMSW---P--------VPGTLMIEPTE-SESKEELDRYCDALISIREEIAQIENGKAD 981 (1058)
Q Consensus 918 ~~~~~v~k~L~-~~Gi~~---~~~~~---p--------~~~~Lris~te-~~t~eeid~fi~aL~~i~~e~~~~~~~~~~ 981 (1058)
.+...++.+|. +.|+.+ +.+.+ | ..+.+|+.++- .-|.+++|..+++|+.+.+....|.-=++.
T Consensus 339 ~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (431)
T cd00617 339 FPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYERREDIRGLRIV 418 (431)
T ss_pred CcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhhHhhCCCeEEE
Confidence 35778887766 567864 22221 1 13678998875 568899999999999999987776422344
Q ss_pred CCCcccc
Q 001531 982 IHNNVLK 988 (1058)
Q Consensus 982 ~~~~~~~ 988 (1058)
.+|..|+
T Consensus 419 ~~~~~lr 425 (431)
T cd00617 419 YEPKLLR 425 (431)
T ss_pred ecCccce
Confidence 4555544
No 426
>PRK08175 aminotransferase; Validated
Probab=99.53 E-value=2e-12 Score=151.63 Aligned_cols=305 Identities=12% Similarity=0.122 Sum_probs=180.6
Q ss_pred hhcHHHHHHHHHHHHHHHhCCC--ce-eeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcE
Q 001531 627 AQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1058)
Q Consensus 627 ~qG~~~~~~el~~~lael~G~~--~~-~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~ 703 (1058)
.+|..++...+.+++.+..|.. .. ++..++|++.- ..++++.+. .++++|+++.+.++.+...+...|++
T Consensus 66 ~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~--l~~~~~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~ 138 (395)
T PRK08175 66 SRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEG--LAHLMLATL-----DHGDTVLVPNPSYPIHIYGAVIAGAQ 138 (395)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHH--HHHHHHHhC-----CCCCEEEEcCCCCcchHHHHHHcCCe
Confidence 3677666666677776665654 33 45556666422 222333321 25678999988877777777889999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--ccHHHHHHHHHHcCCEEEEeccCccc-ccCcCCC
Q 001531 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVGLTSP 779 (1058)
Q Consensus 704 vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~a-l~gl~~p 779 (1058)
++.++.++++ .++++++++++++.+++++|++++| |.+|.+- +.+++|+++|+++|+++++|.++..- ..+...+
T Consensus 139 ~~~v~~~~~~-~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~ 217 (395)
T PRK08175 139 VRSVPLVEGV-DFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAP 217 (395)
T ss_pred EEEEecccCC-CcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCc
Confidence 9999997654 4689999988754468899999988 5789875 24589999999999999999986321 1111111
Q ss_pred ------CccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHH
Q 001531 780 ------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (1058)
Q Consensus 780 ------g~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~ 853 (1058)
+..+..++..++.|.|+.| |.++|++++++++.+.+-.. +.....+.+...+.
T Consensus 218 ~~~~~~~~~~~~i~~~S~SK~~g~p----GlRiG~~~~~~~l~~~~~~~--------------~~~~~~~~~~~~q~--- 276 (395)
T PRK08175 218 SIMQVPGAKDVAVEFFTLSKSYNMA----GWRIGFMVGNPELVSALARI--------------KSYHDYGTFTPLQV--- 276 (395)
T ss_pred chhcCCCcccCEEEEeeccccccCc----chhheeeeCCHHHHHHHHHH--------------HhhcccCCCcHHHH---
Confidence 1112235567888888543 66789999877665543100 00011111111111
Q ss_pred HHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHH-HCCc
Q 001531 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGF 932 (1058)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~-~~Gi 932 (1058)
++...+. .+.+-+++..+...++.+++.+.|++. .+.+..+++.. -++++++... ...+..+++.+|. ++|+
T Consensus 277 -~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~~g~--~i~i~l~~~~--~~~~~~~~~~~l~~~~gv 349 (395)
T PRK08175 277 -AAIAALE-GDQQCVRDIAEQYKRRRDVLVKGLHEA-GWMVEMPKASM--YVWAKIPEPY--AAMGSLEFAKKLLNEAKV 349 (395)
T ss_pred -HHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCEEE--EEEEECCccc--CCCCHHHHHHHHHHhCCE
Confidence 1112221 123335555555667778898988875 22221222222 2556665210 0124688888776 6899
Q ss_pred cccC-CCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001531 933 HGPT-MSWP--VPGTLMIEPTESESKEELDRYCDALISIR 969 (1058)
Q Consensus 933 ~~~~-~~~p--~~~~Lris~te~~t~eeid~fi~aL~~i~ 969 (1058)
.+.. ..|+ ..+.+||++. .+.+++...++.|.+++
T Consensus 350 ~v~p~~~f~~~~~~~lRis~~--~~~~~~~~al~~l~~~l 387 (395)
T PRK08175 350 CVSPGIGFGDYGDTHVRFALI--ENRDRIRQAIRGIKAMF 387 (395)
T ss_pred EEeCchhhCcCCCCeEEEEeC--CCHHHHHHHHHHHHHHH
Confidence 7643 2243 2468999985 34555555555555444
No 427
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.53 E-value=7.3e-13 Score=154.43 Aligned_cols=217 Identities=17% Similarity=0.195 Sum_probs=143.9
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCc-cHHHH---HhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGT-NPATA---AMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~-~pa~a---~~~G~~vv~V~~ 709 (1058)
..++++.++++.|.+. .+..++|.++.. ++++.+. .++++|+++...|+. +.... ...|++++.++.
T Consensus 54 ~~~L~~~lA~l~g~~~-~i~~~sg~~Ai~---~~l~~l~-----~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~ 124 (386)
T PRK08045 54 RDVVQRALAELEGGAG-AVLTNTGMSAIH---LVTTVFL-----KPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQ 124 (386)
T ss_pred HHHHHHHHHHHhCCCe-EEEECCHHHHHH---HHHHHHc-----CCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCC
Confidence 4478899999999654 455666655443 3333321 256889998876653 22222 235567777642
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
.|+++++++++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|+++... ....|-++|+|+++
T Consensus 125 -----~d~e~l~~~l~---~~tklV~l~sP~NPtG~v~-di~~I~~ia~~~g~~vivDeay~~~--~~~~pl~~gaDivv 193 (386)
T PRK08045 125 -----GDEQALRAALA---EKPKLVLVESPSNPLLRVV-DIAKICHLAREAGAVSVVDNTFLSP--ALQNPLALGADLVL 193 (386)
T ss_pred -----CCHHHHHHhcc---cCCeEEEEECCCCCCCEec-CHHHHHHHHHHcCCEEEEECCCCcc--ccCCchhhCCCEEE
Confidence 68999999996 789999999995 689887 7999999999999999999986432 23567788999999
Q ss_pred eCCccccccCCCCCCCceeEEEEe-CCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001531 789 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~G~i~~~-~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1058)
.++||+++. .++--.|++.++ +++...+. .. + ..+ ..+.++ . -+|+...|-+-
T Consensus 194 ~S~tK~l~G---~~d~~~G~vi~~~~~~~~~l~-----~~-------~-~~~-g~~~~p-------~--~~~l~~rgl~t 247 (386)
T PRK08045 194 HSCTKYLNG---HSDVVAGVVIAKDPDVVTELA-----WW-------A-NNI-GVTGGA-------F--DSYLLLRGLRT 247 (386)
T ss_pred eecceeccC---CCCceeEEEEeCcHHHHHHHH-----HH-------H-Hhc-CCCCCH-------H--HHHHHHhhhcc
Confidence 999999851 112226777664 33332221 00 0 001 111111 1 23344555556
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC---Ceeecc
Q 001531 868 LTEASKIAILNANYMAKRLEKHY---PILFRG 896 (1058)
Q Consensus 868 l~~~a~~~~~~a~yL~~~L~~~~---~v~~~g 896 (1058)
+..+.++..+|+..+++.|+++. .|.|+|
T Consensus 248 l~~R~~~~~~na~~la~~L~~~p~v~~V~yp~ 279 (386)
T PRK08045 248 LVPRMELAQRNAQAIVKYLQTQPLVKKLYHPS 279 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEeEEECCC
Confidence 77788889999999999999862 345655
No 428
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.53 E-value=9.2e-13 Score=155.48 Aligned_cols=268 Identities=18% Similarity=0.165 Sum_probs=168.2
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCc-cHH---HHHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGT-NPA---TAAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~-~pa---~a~~~G~~vv~V~~ 709 (1058)
...+++.++++.|.+.+ +..++|..+..++++++. .++++|+++...|+. +.. .+...|++++.++.
T Consensus 66 ~~~Le~~lA~leg~~~a-l~~~sG~~Ai~~al~~ll--------~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~ 136 (431)
T PRK08248 66 TDVFEKRIAALEGGIGA-LAVSSGQAAITYSILNIA--------SAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP 136 (431)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh--------CCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC
Confidence 34688999999997654 567778766544443331 256789998876643 322 25678999999986
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
.|+++++++++ +++++|++++| |++|.+. |+++|+++||++|+++++|+++.. +....|.++|+|+++
T Consensus 137 -----~d~e~l~~ai~---~~tklV~l~sp~NPtG~v~-di~~I~~la~~~gi~vIvD~t~a~--~~~~~pl~~gaDivv 205 (431)
T PRK08248 137 -----SDPENFEAAIT---DKTKALFAETIGNPKGDVL-DIEAVAAIAHEHGIPLIVDNTFAS--PYLLRPIEHGADIVV 205 (431)
T ss_pred -----CCHHHHHHhcC---CCCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEeCCCCc--cccCChhHcCCCEEE
Confidence 48999999996 78999999998 5789998 899999999999999999998542 234566789999999
Q ss_pred eCCccccccCCCCCCCc--eeEEEE-eCCCCCCCCCC---CcccCCCCCCC------CC-----------CCCCCCCCcc
Q 001531 789 LNLHKTFCIPHGGGGPG--MGPIGV-KKHLAPFLPSH---PVVSTGGIPAP------EK-----------SQPLGTIAAA 845 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg--~G~i~~-~~~l~~~lpg~---~vg~~~d~g~~------~~-----------~~~t~~i~sa 845 (1058)
.++||+++ ||| +|.+.+ +.+....-.+. ......++..+ ++ ....+...
T Consensus 206 ~S~tK~lg------g~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l-- 277 (431)
T PRK08248 206 HSATKFIG------GHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAAL-- 277 (431)
T ss_pred EcCccccC------CCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCC--
Confidence 99999985 343 444444 33321000011 00000000000 00 00011110
Q ss_pred chhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCC---eeeccCCCccceEEEEecccccccCCCCHHH
Q 001531 846 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYP---ILFRGVNGTVAHEFIVDLRGLKNTAGIEPED 922 (1058)
Q Consensus 846 ~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~---v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~ 922 (1058)
.. --+|+...|-+-+..+.++..+||..|++.|+++.. |.|+|- . .-...+
T Consensus 278 ------~p--~~a~l~~rgl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl---------------~---s~p~~~ 331 (431)
T PRK08248 278 ------SP--FNSFLLLQGLETLHLRMERHSENALAVAKFLEEHEAVEWVSYPGL---------------P---SHPSYE 331 (431)
T ss_pred ------CH--HHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCC---------------C---CCccHH
Confidence 00 123455556566667788889999999999998733 333321 0 112356
Q ss_pred HHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q 001531 923 VAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALI 966 (1058)
Q Consensus 923 v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~ 966 (1058)
++++.+..|+ .+.+-|.+ ..+.++..+|++.|+
T Consensus 332 ~~~~~~~~g~---------gg~~sf~l--~~~~~~~~~f~~~l~ 364 (431)
T PRK08248 332 LAKKYLPKGQ---------GAILTFGI--KGGVEAGKKLIDSVK 364 (431)
T ss_pred HHHHhCcCCC---------ceEEEEEe--cCCHHHHHHHHHhCC
Confidence 6666543331 23344444 335778889999886
No 429
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.53 E-value=2.7e-12 Score=146.23 Aligned_cols=300 Identities=18% Similarity=0.158 Sum_probs=188.2
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHH---HhCCcEEEEEcCC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA---AMCGMKIVSVGTD 710 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a---~~~G~~vv~V~~d 710 (1058)
..++++.+++.+|...+ +..+||+.+. .+++++. +.+++|+||+|.- ++.+++ .+.|.++|+|++|
T Consensus 36 v~~FE~~~ae~~G~k~a-va~~sgT~AL---~laL~al----~ig~GDeVI~ps~---TfvATan~i~~~Ga~PVFvDid 104 (374)
T COG0399 36 VRRFEQAFAEYLGVKYA-VAVSSGTAAL---HLALLAL----AIGPGDEVIVPSF---TFVATANAVLLVGAKPVFVDID 104 (374)
T ss_pred HHHHHHHHHHHhCCCeE-EEecChHHHH---HHHHHhc----CCCCCCEEEecCC---chHHHHHHHHHcCCeEEEEecC
Confidence 45888999999999986 4456676544 3444421 2457899999875 666664 4799999999999
Q ss_pred CC-CCCCHHHHHHHHHhcCCCeEEEEEEcCCCcccccccHHHHHHHHHHcCCEEEEeccCcccccC-cCCCCccCCcEEE
Q 001531 711 AK-GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG-LTSPGYIGADVCH 788 (1058)
Q Consensus 711 ~~-g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~g-l~~pg~~GaDi~~ 788 (1058)
++ +++|++.|+++|+ ++|++|+.. ..+|..- |+++|.++|++||++|+-|+|+..+..- -...|.+| |+.+
T Consensus 105 ~~T~nid~~~ie~aIt---~~tKAIipV--hl~G~~~-dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~G-d~~~ 177 (374)
T COG0399 105 PDTLNIDPDLIEAAIT---PRTKAIIPV--HLAGQPC-DMDAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSFG-DIGA 177 (374)
T ss_pred CcccCCCHHHHHHHcc---cCCeEEEEe--hhccCCC-CHHHHHHHHHHcCCeEEEEcchhccCeecCccccccc-ceEE
Confidence 76 8999999999998 789999986 4778876 8999999999999999999998533211 12335554 6777
Q ss_pred eCCccccccCCCCCCCceeEEEEeC-CCCCCC---CCCCcccCCCCC-CCCCCCCCCCCCccchhhHHHHHHHHHHHHHH
Q 001531 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFL---PSHPVVSTGGIP-APEKSQPLGTIAAAPWGSALILPISYTYIAMM 863 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~G~i~~~~-~l~~~l---pg~~vg~~~d~g-~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~l 863 (1058)
+|+|-+=.++.| -+|.+.+++ ++.+++ ..+ |...+.. ++....-..|..- .-..+++.++-|
T Consensus 178 fSF~~~K~ittg----EGGav~tnd~ela~k~~~lr~h--G~~~~~~~~y~~~~~G~N~rm----~~iqAAigl~QL--- 244 (374)
T COG0399 178 FSFHATKNLTTG----EGGAVVTNDEELAEKARSLRNH--GLSRDAVFKYLHEELGYNYRL----TEIQAAIGLAQL--- 244 (374)
T ss_pred EEecCCCCcccc----CceEEEeCCHHHHHHHHHHHHh--CcCCCccccceeeecccccCH----HHHHHHHHHHHH---
Confidence 776544332322 347888885 444332 111 1111000 0000000001110 011222223322
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCC-CccceEEEEecccccccCCCCHHHHHHHHHHCCccc----cC
Q 001531 864 GSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVN-GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG----PT 936 (1058)
Q Consensus 864 G~eGl~~~a~~~~~~a~yL~~~L~~~--~~v~~~g~~-~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~----~~ 936 (1058)
+.+.+..++...++++..+.|++. +.+...... ....|.+.+.++. .+.+-+.+.+.|.++||.. ..
T Consensus 245 --~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~----~~~~R~~l~~~L~~~gi~~~~~~~P 318 (374)
T COG0399 245 --ERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDE----EGISRDALMESLKEAGVGAVVYFRP 318 (374)
T ss_pred --HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecC----CCCCHHHHHHHHHhCCCCceEEeec
Confidence 234555555667788888888875 233222111 1335666666542 1467789999999997652 11
Q ss_pred ---------------CCCCC-----CCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001531 937 ---------------MSWPV-----PGTLMIEPTESESKEELDRYCDALISIRE 970 (1058)
Q Consensus 937 ---------------~~~p~-----~~~Lris~te~~t~eeid~fi~aL~~i~~ 970 (1058)
..+|+ ...|.+-.....+.+|+++.+++|++++.
T Consensus 319 ~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~ 372 (374)
T COG0399 319 LHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLG 372 (374)
T ss_pred cccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhc
Confidence 11231 24677777788899999999999998864
No 430
>PRK09265 aminotransferase AlaT; Validated
Probab=99.53 E-value=2.8e-12 Score=150.84 Aligned_cols=301 Identities=13% Similarity=0.063 Sum_probs=172.9
Q ss_pred HHHHHHHHHh------CCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcC
Q 001531 636 NLGEWLCTIT------GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGT 709 (1058)
Q Consensus 636 el~~~lael~------G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~ 709 (1058)
++++.+++.+ +.+...+..++|++. +..++++.+. +++++|++++..|..+...+...|.+++.+++
T Consensus 76 ~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~--~l~~~~~~~~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~ 148 (404)
T PRK09265 76 SARKAIMQYYQQKGIPDVDVDDIYIGNGVSE--LIVMAMQALL-----NNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLC 148 (404)
T ss_pred HHHHHHHHHHhccCCCCCCcccEEEeCChHH--HHHHHHHHhC-----CCCCEEEEeCCCCcChHHHHHHcCCEEEEEec
Confidence 4445555554 555555666666543 2334444431 25678999998888777778889999999987
Q ss_pred CCC--CCCCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCcccc-cC--cCCCCc
Q 001531 710 DAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG--LTSPGY 781 (1058)
Q Consensus 710 d~~--g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~al-~g--l~~pg~ 781 (1058)
+.+ +.+|+++++++++ +++++|++++|+ .+|.+. +++++|+++|+++|+++++|+++..-. .+ ......
T Consensus 149 ~~~~~~~~d~~~l~~~~~---~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~ 225 (404)
T PRK09265 149 DEEAGWFPDLDDIRSKIT---PRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIAS 225 (404)
T ss_pred ccccCCCCCHHHHHHhcc---ccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHH
Confidence 643 5799999999986 688899999995 789875 249999999999999999999863211 11 001111
Q ss_pred c--CCcE-EEeCCccccccCCCCCCCceeEEEEe--CCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHH
Q 001531 782 I--GADV-CHLNLHKTFCIPHGGGGPGMGPIGVK--KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPIS 856 (1058)
Q Consensus 782 ~--GaDi-~~~s~hKtf~~P~g~GGPg~G~i~~~--~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a 856 (1058)
+ ...+ +..++.|+|+.| |.++|++++. +.+.+.+-... . . ......+.+..++.. +
T Consensus 226 ~~~~~~vi~~~S~SK~~~~p----GlRiG~~v~~~~~~~~~~~~~~~-~---------~-~~~~~~~~~~~~q~~----~ 286 (404)
T PRK09265 226 LAPDLLCVTFNGLSKAYRVA----GFRVGWMVLSGPKKHAKGYIEGL-D---------M-LASMRLCANVPAQHA----I 286 (404)
T ss_pred cCCCceEEEEecchhhccCc----ccceEEEEEeCchHHHHHHHHHH-H---------H-HhccccCCCcHHHHH----H
Confidence 1 1123 346678887543 7789999974 22111000000 0 0 000011111112221 1
Q ss_pred HHHHHHHchhhHHHH---HHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCcc
Q 001531 857 YTYIAMMGSKGLTEA---SKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 933 (1058)
Q Consensus 857 ~a~l~~lG~eGl~~~---a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~ 933 (1058)
.+++. ..+.+++. .++..++++++.+.|++...+.+..+.+.++ ++++++........+.+.+.+.|.++|+.
T Consensus 287 ~~~l~--~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~--l~~~~~~~~~~~~~~~~~~~~~l~~~gv~ 362 (404)
T PRK09265 287 QTALG--GYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGALY--AFPKLDPKVYPIHDDEQFVLDLLLQEKVL 362 (404)
T ss_pred HHHhc--CchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceE--EEEEecccccCCCCHHHHHHHHHHhCCEE
Confidence 12221 11112222 2344566777888887642222222333332 44555421000001234567778899997
Q ss_pred cc-CCCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 934 GP-TMSWP--VPGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 934 ~~-~~~~p--~~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
+. ...|+ .++.+||++. .+.++++..++.|+++++.
T Consensus 363 v~pg~~F~~~~~~~~Ri~~~--~~~e~l~~~l~rl~~~l~~ 401 (404)
T PRK09265 363 LVQGTGFNWPEPDHFRIVTL--PRVDDLEEAIGRIGRFLSG 401 (404)
T ss_pred EECchhhCCCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHH
Confidence 53 33342 3578999994 5688899999888877654
No 431
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.53 E-value=5.5e-13 Score=155.44 Aligned_cols=256 Identities=17% Similarity=0.222 Sum_probs=168.1
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHH----HHHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa----~a~~~G~~vv~V~~ 709 (1058)
..++++.++++.|.+.+ +..++|+.+..++++++. +++++|+++...|+.... .+...|++++.++.
T Consensus 56 ~~~le~~la~l~g~~~~-~~~~sG~~Ai~~al~al~--------~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~ 126 (380)
T TIGR01325 56 VAAFEERIAALEGAERA-VATATGMSAIQAALMTLL--------QAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDP 126 (380)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh--------CCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECC
Confidence 45788999999998765 456677766654444331 245789998887765322 35678999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
+ |+++++++++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|+++... ....|.++|+|+++
T Consensus 127 ~-----d~~~l~~~i~---~~tklV~le~p~np~g~~~-dl~~I~~la~~~gi~livD~a~~~~--~~~~pl~~g~Divv 195 (380)
T TIGR01325 127 T-----DLNAWEAAVK---PNTKLVFVETPSNPLGELV-DIAALAELAHAIGALLVVDNVFATP--VLQQPLKLGADVVV 195 (380)
T ss_pred C-----CHHHHHHhcC---CCceEEEEECCCCCCCeee-CHHHHHHHHHHcCCEEEEECCCccc--ccCCchhhCCCEEE
Confidence 3 7899999886 789999999995 689887 8999999999999999999986422 23456678999999
Q ss_pred eCCccccccCCCCCCC-ceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001531 789 LNLHKTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGP-g~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1058)
.++||+|+. .|- .+|++..++++.+.+... . ...+...+ ++ .+| +...|.+-
T Consensus 196 ~S~sK~l~g----~g~~~gG~vv~~~~~~~~l~~~------------~-~~~g~~~~-p~-------~a~--~~l~~l~t 248 (380)
T TIGR01325 196 YSATKHIDG----QGRVMGGVIAGSEELMAEVAVY------------L-RHTGPAMS-PF-------NAW--VLLKGLET 248 (380)
T ss_pred eeccceecC----CCCeEEEEEEeCHHHHHHHHHH------------H-HhhCCCCC-HH-------HHH--HHHhccCc
Confidence 999999852 122 247777776544332100 0 00111111 11 122 33445566
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCC---eeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCE
Q 001531 868 LTEASKIAILNANYMAKRLEKHYP---ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 944 (1058)
Q Consensus 868 l~~~a~~~~~~a~yL~~~L~~~~~---v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~ 944 (1058)
+....++..+++.++++.|+++.. |.|++- + .-...+++++.+ .| + .+.
T Consensus 249 l~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l------------~------s~~~~~~~~~~~-~g-------~--g~~ 300 (380)
T TIGR01325 249 LSLRMQKQFDSALAIAEWLQAQPQVQAVYYPGL------------P------DHPQHELARRQQ-SG-------G--GTV 300 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccEEECCCC------------C------CCccHHHHHhhC-CC-------C--ceE
Confidence 676777888999999999987532 223221 0 112345666543 12 1 243
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHH
Q 001531 945 LMIEPTESESKEELDRYCDALIS 967 (1058)
Q Consensus 945 Lris~te~~t~eeid~fi~aL~~ 967 (1058)
+-|.+ . +.+...+|++.|+-
T Consensus 301 ~s~~l--~-~~~~~~~f~~~l~~ 320 (380)
T TIGR01325 301 IGFDV--A-DRAAAWKVLDAVEL 320 (380)
T ss_pred EEEEE--C-CHHHHHHHHHcCCc
Confidence 44444 3 57888899988864
No 432
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.53 E-value=9.9e-13 Score=153.63 Aligned_cols=214 Identities=22% Similarity=0.258 Sum_probs=143.8
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHH-H---HhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-A---AMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~-a---~~~G~~vv~V~~ 709 (1058)
..++++.++++.|.+.+. ..++|..+..++ ++.+. .++++||++...|+..... . ...|++++.++.
T Consensus 63 ~~~Le~~lA~~~g~~~~i-~~~sG~~Ai~~~---l~all-----~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~ 133 (388)
T PRK07811 63 RTALEEQLAALEGGAYGR-AFSSGMAATDCL---LRAVL-----RPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL 133 (388)
T ss_pred HHHHHHHHHHHhCCCceE-EeCCHHHHHHHH---HHHHh-----CCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCC
Confidence 457889999999998753 345666554333 33331 2567899988766533222 2 236888888875
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
.|+++|+++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++.. +....|...|+|+++
T Consensus 134 -----~d~e~l~~~i~---~~tklV~ie~p~NPtg~~~-dl~~I~~la~~~gi~lIvD~a~a~--~~~~~p~~~gaDivv 202 (388)
T PRK07811 134 -----SDLDAVRAAIT---PRTKLIWVETPTNPLLSIT-DIAALAELAHDAGAKVVVDNTFAS--PYLQQPLALGADVVV 202 (388)
T ss_pred -----CCHHHHHHhcC---cCCeEEEEECCCCCcceec-CHHHHHHHHHHcCCEEEEECCCCc--cccCCchhhCCcEEE
Confidence 58999999996 789999999995 688887 899999999999999999998642 223456678999999
Q ss_pred eCCccccccCCCCCCCc---eeEEEEeC-CCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHc
Q 001531 789 LNLHKTFCIPHGGGGPG---MGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg---~G~i~~~~-~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1058)
.+++|+|+ ||+ +|++++++ .+...+... + ..++...+ + . . +++...+
T Consensus 203 ~S~sK~l~------g~~~~~gG~vv~~~~~l~~~~~~~------------~-~~~g~~~s-~----~---~--a~l~~~~ 253 (388)
T PRK07811 203 HSTTKYIG------GHSDVVGGALVTNDEELDEAFAFL------------Q-NGAGAVPG-P----F---D--AYLTLRG 253 (388)
T ss_pred ecCceeec------CCCCcEEEEEEECCHHHHHHHHHH------------H-HhcCCCCC-H----H---H--HHHHHhc
Confidence 99999985 443 68888764 333322100 0 01111111 1 1 1 2233344
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhccC---Ceeecc
Q 001531 865 SKGLTEASKIAILNANYMAKRLEKHY---PILFRG 896 (1058)
Q Consensus 865 ~eGl~~~a~~~~~~a~yL~~~L~~~~---~v~~~g 896 (1058)
-+-+..+.++..+|+..+++.|+++. .|.|+|
T Consensus 254 L~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~ 288 (388)
T PRK07811 254 LKTLAVRMDRHSENAEAVAEFLAGHPEVSTVLYPG 288 (388)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCC
Confidence 44466666777889999999998762 345555
No 433
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.53 E-value=2.7e-13 Score=158.47 Aligned_cols=257 Identities=21% Similarity=0.245 Sum_probs=168.0
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHH----HHHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa----~a~~~G~~vv~V~~ 709 (1058)
..++++.++++.|.+.+ +..++|.++..++++++. +++++||++...|+.... .+...|++++.++.
T Consensus 63 ~~~le~~la~l~g~~~~-v~~ssG~~Ai~~al~al~--------~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 133 (390)
T PRK08133 63 VTMFQERLAALEGAEAC-VATASGMAAILAVVMALL--------QAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDL 133 (390)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh--------CCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECC
Confidence 55789999999998865 455677666544433331 246789998877764332 24568999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
+ |+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++.. ..+..|.++|+|+++
T Consensus 134 ~-----d~~~l~~~i~---~~tklV~ie~p~NptG~v~-dl~~I~~la~~~gi~livD~t~~~--~~~~~pl~~g~Divv 202 (390)
T PRK08133 134 T-----DLDAWRAAVR---PNTKLFFLETPSNPLTELA-DIAALAEIAHAAGALLVVDNCFCT--PALQQPLKLGADVVI 202 (390)
T ss_pred C-----CHHHHHHhcC---cCCeEEEEECCCCCCCCcC-CHHHHHHHHHHcCCEEEEECCCcc--cccCCchhhCCcEEE
Confidence 3 8999999996 78999999999 4689987 899999999999999999998532 234567778999999
Q ss_pred eCCccccccCCCCCCCce-eEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001531 789 LNLHKTFCIPHGGGGPGM-GPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~-G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1058)
.++||+|+. .|..+ |+++.++++...+.... + ..+... ++ . .+| +...|-+.
T Consensus 203 ~S~sK~~~g----~g~~~GG~vv~~~~~~~~~~~~~-----------~--~~g~~~-~~----~---~a~--~~l~gl~t 255 (390)
T PRK08133 203 HSATKYLDG----QGRVLGGAVVGSKELMEEVFGFL-----------R--TAGPTL-SP----F---NAW--VFLKGLET 255 (390)
T ss_pred eecceeecC----CcceEeEEEEcCHHHHHHHHHHH-----------H--HhCCCC-CH----H---HHH--HHHcccch
Confidence 999999852 22333 67777655432221000 0 001111 11 1 123 23345556
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCe---eeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCE
Q 001531 868 LTEASKIAILNANYMAKRLEKHYPI---LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 944 (1058)
Q Consensus 868 l~~~a~~~~~~a~yL~~~L~~~~~v---~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~ 944 (1058)
+..+.++..+++.++++.|++...+ .|+| +. .....+++++.+ .| + .+.
T Consensus 256 l~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~---------------l~---~~p~~~~~~~~~-~g-------~--g~~ 307 (390)
T PRK08133 256 LSLRMEAHSANALALAEWLEAHPGVERVFYPG---------------LP---SHPQHELAKRQQ-KG-------G--GAI 307 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCC---------------CC---CCccHHHHHHhC-CC-------C--ceE
Confidence 7777777788999999999886333 2221 10 112356666543 22 1 243
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHH
Q 001531 945 LMIEPTESESKEELDRYCDALIS 967 (1058)
Q Consensus 945 Lris~te~~t~eeid~fi~aL~~ 967 (1058)
+-|.+ ..++++..+|++.|+-
T Consensus 308 ~s~~l--~~~~~~~~~f~~~l~l 328 (390)
T PRK08133 308 VSFEV--KGGREAAWRVIDATRL 328 (390)
T ss_pred EEEEE--cCCHHHHHHHHHhCCc
Confidence 44444 3357788899988863
No 434
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.53 E-value=2.1e-13 Score=151.22 Aligned_cols=327 Identities=17% Similarity=0.182 Sum_probs=198.6
Q ss_pred hhhhcHHHHHHHHHHHHHHHhCCCc--eeeecCchHHHHHHHHHHHHHHHHH-----cCCC-CCCEEE-EcCCCCCccHH
Q 001531 625 DQAQGYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHKA-----RGDH-HRNVCI-IPVSAHGTNPA 695 (1058)
Q Consensus 625 e~~qG~~~~~~el~~~lael~G~~~--~~l~~~sGa~ge~a~llair~y~~~-----~G~~-~r~~Vl-ip~saHg~~pa 695 (1058)
|+.++..-+..++-..+.++.|.+. ..+...+|+-.+.-++++.| |... +|-. =.+-|+ .++-+|-+.-+
T Consensus 134 EiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Ar-yk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~k 212 (510)
T KOG0629|consen 134 EIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCAR-YKNFPEVKTKGMFALPPLILFTSEESHYSIKK 212 (510)
T ss_pred EecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHH-hhcCchhhhhhhhcCCcEEEEecccchhhHHH
Confidence 5555655667788888999999885 35666677766633333333 3221 2210 123343 57777888888
Q ss_pred HHHhCC---cEEEEEcCCCCCCCCHHHHHHHHHhcCCC---eEEEEEEcCCC-cccccccHHHHHHHHHHcCCEEEEecc
Q 001531 696 TAAMCG---MKIVSVGTDAKGNINIEELRKAAEANRDN---LSTLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGA 768 (1058)
Q Consensus 696 ~a~~~G---~~vv~V~~d~~g~iD~e~L~~~i~~~~~~---taaV~vt~Pn~-~G~i~~dI~eI~~lah~~g~lv~vD~a 768 (1058)
.+.++| ..++.|++|+.|.+++++|+++|-+.+.+ +..|-.|.-+| .|.|+ ||..|+++|++|+.|+|||+|
T Consensus 213 aAa~lg~gtd~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFD-dL~~iadiC~k~~lWmHvDAA 291 (510)
T KOG0629|consen 213 AAAFLGLGTDHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFD-DLNGIADICEKHKLWMHVDAA 291 (510)
T ss_pred HHHHhccCCceeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccC-cHHHHHHHHHhcCEEEEeecc
Confidence 888888 58999999999999999999999765455 56666666554 79999 899999999999999999997
Q ss_pred CcccccC-cCCC--------CccCCcEEEeCCccccccCCCCCCCceeEEEEeC-CCCCCCCC----CCcccCCCCCCCC
Q 001531 769 NMNAQVG-LTSP--------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPS----HPVVSTGGIPAPE 834 (1058)
Q Consensus 769 ~~~al~g-l~~p--------g~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~-~l~~~lpg----~~vg~~~d~g~~~ 834 (1058)
.+| +.-+ |-.-+|.++.|.||+++.|+.++ .+.+++ .+....-. .++.+... +.
T Consensus 292 ----wGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCs-----a~l~r~~gll~~Cn~~~A~YLFq~dK~---Yd 359 (510)
T KOG0629|consen 292 ----WGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCS-----AFLTREEGLLQRCNQMSAIYLFQQDKF---YD 359 (510)
T ss_pred ----cccccccChhhHhhccCccccCceeecHHHhhcCcchhh-----HHHHHHHHHHHhhcccchhhhhccCce---ee
Confidence 444 3222 34468999999999998887765 444443 22211100 01111000 00
Q ss_pred CCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCccceE-EEEeccc
Q 001531 835 KSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHE-FIVDLRG 911 (1058)
Q Consensus 835 ~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~--~~v~~~g~~~~~~~e-~vv~~~~ 911 (1058)
....|+.-.. ..|.-.-+..-|-..+.-|-+|+++...+++.+|+||.++|++- +..++.++.. +.+. |++.-+.
T Consensus 360 vS~DTgdK~i-QCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe-~~nv~fw~vp~~ 437 (510)
T KOG0629|consen 360 VSYDTGDKAI-QCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPE-HVNVCFWYVPPS 437 (510)
T ss_pred cccccccchh-hcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCc-eEEEeeccCchH
Confidence 1111221110 11211223345777788899999999999999999999999874 5555543211 2221 2222111
Q ss_pred cc-ccCC--------CCHHHHHHHHHHCCccccCCCCC---CCCEEEEEcCC-CCCHHHHHHHHHHHHHH
Q 001531 912 LK-NTAG--------IEPEDVAKRLMDYGFHGPTMSWP---VPGTLMIEPTE-SESKEELDRYCDALISI 968 (1058)
Q Consensus 912 ~~-~~~g--------~~~~~v~k~L~~~Gi~~~~~~~p---~~~~Lris~te-~~t~eeid~fi~aL~~i 968 (1058)
+. .+.+ .-+..|-.+++++|-..-+.+ | .++.+|+..+. ..+.+|+|-+++.+..+
T Consensus 438 lR~~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~Yq-Pl~~~~nffr~v~sn~a~~~ad~dflldEIerl 506 (510)
T KOG0629|consen 438 LRGWQENPERDSRLVKVAPKIKERMMKKGTTMIGYQ-PLGDKPNFFRMVISNPALTEADLDFLLDEIERL 506 (510)
T ss_pred hccCcccchhhhHHHhhCcHHHHHHHhccceeeEec-ccccccchhheecccchhhhhhHHHHHHHHHHh
Confidence 10 0000 012346677778875421111 2 13445544443 35678899988877654
No 435
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.52 E-value=1.5e-12 Score=150.59 Aligned_cols=281 Identities=15% Similarity=0.160 Sum_probs=175.8
Q ss_pred HHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCC--
Q 001531 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK-- 712 (1058)
Q Consensus 635 ~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~-- 712 (1058)
.++++.+++.++.+..++..++|++. +..++++.+ .+ +.|+++.+.++.+...+...|++++.++++.+
T Consensus 57 ~~lr~~ia~~~~~~~~~i~it~Ga~~--~l~~~~~~~------~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~ 127 (354)
T PRK06358 57 LELRKRIASFEQLDLENVILGNGATE--LIFNIVKVT------KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETN 127 (354)
T ss_pred HHHHHHHHHHhCCChhhEEECCCHHH--HHHHHHHHh------CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccC
Confidence 47888899999998877777777653 333344432 12 36888887666666667889999999998754
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCccc-ccCcCCC-C-cc-CCc
Q 001531 713 GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVGLTSP-G-YI-GAD 785 (1058)
Q Consensus 713 g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~a-l~gl~~p-g-~~-GaD 785 (1058)
..+| +++.+++. +++++|++++|| .+|.+- +.+++|.++|+++|+++++|+++..- ..+...+ . .. ..+
T Consensus 128 ~~~d-~~~~~~~~---~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~ 203 (354)
T PRK06358 128 FAAN-EIVLEEIK---EEIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFK 203 (354)
T ss_pred CCcc-HHHHHhhc---cCCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCC
Confidence 3688 66666664 568888899994 788875 25899999999999999999986311 1110001 0 01 112
Q ss_pred --EEEeCCccccccCCCCCCCceeEEEEe-CCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHH
Q 001531 786 --VCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 862 (1058)
Q Consensus 786 --i~~~s~hKtf~~P~g~GGPg~G~i~~~-~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~ 862 (1058)
|+..++.|+|++| |.++|++.+. +.+...+-. ......++ ...+. ++. ..
T Consensus 204 ~vi~~~S~SK~~gl~----G~RiG~lv~~~~~~~~~~~~--------------~~~~~~~~--~~~q~----~~~---~~ 256 (354)
T PRK06358 204 NLIIIRAFTKFFAIP----GLRLGYGLTSNKNLAEKLLQ--------------MREPWSIN--TFADL----AGQ---TL 256 (354)
T ss_pred CEEEEEechhhccCc----chhheeeecCCHHHHHHHHH--------------hCCCCcch--HHHHH----HHH---HH
Confidence 5566778887544 7899999875 344332210 00001111 11111 111 12
Q ss_pred Hchhh-HHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccC-CCCC
Q 001531 863 MGSKG-LTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWP 940 (1058)
Q Consensus 863 lG~eG-l~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~-~~~p 940 (1058)
+..+. +++..+....+.+++.+.|++...+.+..+.+.+ +++.++ +..++.++|.++||.+.. ..|+
T Consensus 257 l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f---~~~~~~--------~~~~~~~~l~~~gI~v~~~~~f~ 325 (354)
T PRK06358 257 LDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSVNF---IFFKLE--------KPIDLRKELLKKGILIRSCSNYR 325 (354)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCcceE---EEEEcC--------chHHHHHHHHHCCeEEEECCCCC
Confidence 22222 3445555567778888999774233222223322 456553 247899999999998643 3353
Q ss_pred --CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001531 941 --VPGTLMIEPTESESKEELDRYCDALISIR 969 (1058)
Q Consensus 941 --~~~~Lris~te~~t~eeid~fi~aL~~i~ 969 (1058)
..+++||++ .++++.++|+++|++++
T Consensus 326 ~~~~~~iRls~---~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 326 GLDENYYRVAV---KSREDNKKLLKALEVIL 353 (354)
T ss_pred CCCCCEEEEEe---CCHHHHHHHHHHHHHHh
Confidence 246899998 56899999999998764
No 436
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.52 E-value=4.9e-13 Score=155.88 Aligned_cols=258 Identities=20% Similarity=0.195 Sum_probs=165.8
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHH---HhCCcEEEEEcCC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA---AMCGMKIVSVGTD 710 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a---~~~G~~vv~V~~d 710 (1058)
..++++.++++.|.+.+ +..++|..+..+++.++. +++++|+++...|+.+...+ ...|++++.+.
T Consensus 55 ~~~lE~~lA~l~g~~~~-l~~~sG~~Ai~~~l~~ll--------~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~-- 123 (385)
T PRK08574 55 LRPLEEALAKLEGGVDA-LAFNSGMAAISTLFFSLL--------KAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY-- 123 (385)
T ss_pred HHHHHHHHHHHhCCCcE-EEeCCHHHHHHHHHHHHh--------CCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC--
Confidence 45788999999998765 455677766544443331 25688999988777655443 44688887764
Q ss_pred CCCCCCHHHHHHHHHhcCC-CeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 711 AKGNINIEELRKAAEANRD-NLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 711 ~~g~iD~e~L~~~i~~~~~-~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
+|+++++++++ + +|++|++++| |.+|.+. |+++|+++||++|+++++|+++.. +....|.++|+|+++
T Consensus 124 ----~d~~~l~~~i~---~~~tklV~ie~p~NPtG~v~-dl~~I~~la~~~gi~livD~t~a~--~~~~~~l~~GaDivv 193 (385)
T PRK08574 124 ----PSTEDIIEAIK---EGRTKLVFIETMTNPTLKVI-DVPEVAKAAKELGAILVVDNTFAT--PLLYRPLRHGADFVV 193 (385)
T ss_pred ----CCHHHHHHhcC---ccCceEEEEECCCCCCCEec-CHHHHHHHHHHcCCEEEEECCCCc--cccCChhhhCCcEEE
Confidence 46899999996 5 8999999998 4688887 799999999999999999998642 223456678999999
Q ss_pred eCCccccccCCCCCCCceeEEEEe-CCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001531 789 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~G~i~~~-~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1058)
.|+||+|+.| |..-+|.++++ +++...+-. . + ...+...+ + . .+++...|-+-
T Consensus 194 ~S~sK~l~g~---~d~~gG~vi~~~~~~~~~~~~--~----------~-~~~g~~~~-p----~-----~a~l~l~~l~t 247 (385)
T PRK08574 194 HSLTKYIAGH---NDVVGGVAVAWSGEFLEELWE--W----------R-RRLGTIMQ-P----F-----EAYLVLRGLKT 247 (385)
T ss_pred eeCceeecCC---CCceeEEEEECcHHHHHHHHH--H----------H-HhcCCCCC-H----H-----HHHHHHcccCc
Confidence 9999998422 11224645554 444332210 0 0 00111111 1 1 12334445555
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCC---eeeccCCCccceEEEEecccccccCCCCHHHHHHHHHH-CCccccCCCCCCCC
Q 001531 868 LTEASKIAILNANYMAKRLEKHYP---ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD-YGFHGPTMSWPVPG 943 (1058)
Q Consensus 868 l~~~a~~~~~~a~yL~~~L~~~~~---v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~-~Gi~~~~~~~p~~~ 943 (1058)
+....++..+++.++++.|+++.. |.|+|- . .-...+++++.+. .|+ .+
T Consensus 248 L~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l---------------~---~~~~~~~~~~~~~~~g~---------g~ 300 (385)
T PRK08574 248 LEVRFERQCRNAMAIAEFLSEHPKVAEVYYPGL---------------P---SDPYHGVAKRLFGKDLY---------GG 300 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCEEECCCC---------------C---CCchHHHHHHhCCCCCc---------ce
Confidence 666778888899999999987522 333321 0 1134567766542 221 24
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHH
Q 001531 944 TLMIEPTESESKEELDRYCDALIS 967 (1058)
Q Consensus 944 ~Lris~te~~t~eeid~fi~aL~~ 967 (1058)
.+.|.+ ..+.++..+|++.|+-
T Consensus 301 ~~s~~l--~~~~~~~~~~~~~l~l 322 (385)
T PRK08574 301 VVSFRV--KGGRDAVLKFLRSLKL 322 (385)
T ss_pred EEEEEe--CCCHHHHHHHHHcCCc
Confidence 444444 2357888899988863
No 437
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.52 E-value=7e-13 Score=149.91 Aligned_cols=160 Identities=22% Similarity=0.209 Sum_probs=131.9
Q ss_pred HHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhhc-
Q 001531 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY- 293 (1058)
Q Consensus 215 e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~~l~~- 293 (1058)
.+|..+++|.|.+. +.+|.+|.+|+.+++..+. ..+++|+....++..+...++.....+|++...+|+++++.
T Consensus 81 ~le~~iaal~ga~~--~l~fsSGmaA~~~al~~L~---~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~~~~~~ 155 (409)
T KOG0053|consen 81 VLESGIAALEGAAH--ALLFSSGMAAITVALLHLL---PAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVDDLKKI 155 (409)
T ss_pred HHHHHHHHHhCCce--EEEecccHHHHHHHHHHhc---CCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechhhHHHH
Confidence 45689999999876 7789999988888877764 27999999999999999999877788999999999876654
Q ss_pred ---cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCCCC
Q 001531 294 ---KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGP 368 (1058)
Q Consensus 294 ---l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~GGP 368 (1058)
++++|.+|++..| |.+..+.||++|+++||++|++++| ++.++-++...|-.+|||||+.|+ |.|++.-. -
T Consensus 156 ~~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvV-DnTf~~p~~~~pL~lGADIV~hSaTKyi~Ghsd---v 231 (409)
T KOG0053|consen 156 LKAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVV-DNTFGSPYNQDPLPLGADIVVHSATKYIGGHSD---V 231 (409)
T ss_pred HHhhccCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEE-eCCcCcccccChhhcCCCEEEEeeeeeecCCcc---e
Confidence 6778999999998 8999999999999999999999999 466776777889999999999998 88875322 1
Q ss_pred ceEEEEEe-hhhhhcC
Q 001531 369 HAAFLATS-QEYKRMM 383 (1058)
Q Consensus 369 ~~G~l~~~-~~~~~~l 383 (1058)
-+|.++++ +++.+++
T Consensus 232 i~G~iv~n~~~~~~~l 247 (409)
T KOG0053|consen 232 IGGSVVLNSEELASRL 247 (409)
T ss_pred eeeEEecCcHHHHHHH
Confidence 23566664 4555444
No 438
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.52 E-value=2.4e-12 Score=151.76 Aligned_cols=271 Identities=18% Similarity=0.177 Sum_probs=169.1
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHH----HHHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa----~a~~~G~~vv~V~~ 709 (1058)
..++++.++++.|.+.+ +..++|..|..++++++. .++++|+++.+.|+.... .+...|++++.++
T Consensus 71 ~~~Le~~lA~l~g~~~a-v~~sSG~aAi~~al~all--------~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 140 (436)
T PRK07812 71 QDVVEQRIAALEGGVAA-LLLASGQAAETFAILNLA--------GAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE- 140 (436)
T ss_pred HHHHHHHHHHHhCCCeE-EEEccHHHHHHHHHHHHh--------CCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-
Confidence 34788999999999875 556677766644444331 246789988776654322 2345789988886
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
+. .|+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|++++||+++.. +.+..|.++|+|+++
T Consensus 141 d~---~d~e~l~~ai~---~~tklV~ie~~sNp~G~v~-Dl~~I~~la~~~gi~liVD~t~a~--~~~~~pl~~GaDivv 211 (436)
T PRK07812 141 DP---DDLDAWRAAVR---PNTKAFFAETISNPQIDVL-DIPGVAEVAHEAGVPLIVDNTIAT--PYLIRPLEHGADIVV 211 (436)
T ss_pred CC---CCHHHHHHhCC---CCCeEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCcc--cccCCchhcCCCEEE
Confidence 32 38999999986 88999999998 4789988 899999999999999999998643 234567788999999
Q ss_pred eCCccccccCCCCCCCceeEEEEe-CCCCCCCCCCCcccCCC--CCC---CC----------C---CCCCCCCCccchhh
Q 001531 789 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGG--IPA---PE----------K---SQPLGTIAAAPWGS 849 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~G~i~~~-~~l~~~lpg~~vg~~~d--~g~---~~----------~---~~~t~~i~sa~~g~ 849 (1058)
.++||+++ +| |+ .+|.+.+. ..+...-+....-.+.+ +.. .. + ....+..-+
T Consensus 212 ~S~tK~lg-g~--G~-~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~----- 282 (436)
T PRK07812 212 HSATKYLG-GH--GT-AIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAIS----- 282 (436)
T ss_pred EecccccC-CC--CC-eEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCC-----
Confidence 99999985 12 11 14444443 22110000000000000 000 00 0 000111110
Q ss_pred HHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCC---eeeccCCCccceEEEEecccccccCCCCHHHHHHH
Q 001531 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYP---ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR 926 (1058)
Q Consensus 850 ~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~---v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~ 926 (1058)
.--+|+...|-+-+..+.++..++|..|++.|+++.. |.|+|- + .-...+++++
T Consensus 283 -----p~~a~l~~rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl------------~------s~p~~~~~~~ 339 (436)
T PRK07812 283 -----PFNAFLIAQGLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGL------------P------SSPWYERAKR 339 (436)
T ss_pred -----HHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCC------------C------CCccHHHHHH
Confidence 1134566677777888889999999999999998733 333321 0 0123566666
Q ss_pred HHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q 001531 927 LMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALI 966 (1058)
Q Consensus 927 L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~ 966 (1058)
....|+ .+.+-|.+. .+.++.++|++.|+
T Consensus 340 ~~~~g~---------gg~~sf~l~--~~~~~~~~f~~~l~ 368 (436)
T PRK07812 340 LAPKGT---------GAVLSFELA--GGVEAGKAFVNALT 368 (436)
T ss_pred hCcCCC---------ceEEEEEec--CCHHHHHHHHHhCC
Confidence 543341 244455543 35677889998886
No 439
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.52 E-value=3.7e-12 Score=150.86 Aligned_cols=284 Identities=15% Similarity=0.149 Sum_probs=175.5
Q ss_pred HHHHHHHHHhC--CCceeeecCchHHHHHHHHHHHHHHHHHcCC-------------------CC--CCEEE-EcCCCCC
Q 001531 636 NLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIRAYHKARGD-------------------HH--RNVCI-IPVSAHG 691 (1058)
Q Consensus 636 el~~~lael~G--~~~~~l~~~sGa~ge~a~llair~y~~~~G~-------------------~~--r~~Vl-ip~saHg 691 (1058)
++.+.+++++. ++. .++.+||++++++++..+|.|+..+|. .+ +.+|| ...++||
T Consensus 109 ~l~~~l~~~~p~~~~~-v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG 187 (464)
T TIGR00699 109 ILKEGILKVAPKGQDQ-VWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHG 187 (464)
T ss_pred HHHHhHHhhCCCCcCE-EEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCC
Confidence 33343455653 333 467889999999889988888643221 01 22555 5678999
Q ss_pred ccHHHHHhCCc-----------EEEEEcCCCC--------------CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccc
Q 001531 692 TNPATAAMCGM-----------KIVSVGTDAK--------------GNINIEELRKAAEANRDNLSTLMVTYP-STHGVY 745 (1058)
Q Consensus 692 ~~pa~a~~~G~-----------~vv~V~~d~~--------------g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i 745 (1058)
....+....|- .+..+|.... ..-++++++++++++.+++++|+++.- +..|++
T Consensus 188 ~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~ 267 (464)
T TIGR00699 188 RLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDN 267 (464)
T ss_pred ccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCc
Confidence 87766443221 1223332110 012467788888776678999988753 345666
Q ss_pred cc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc------C----CcEEEeCCccccccCCCCCCCceeEEEEe
Q 001531 746 EE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G----ADVCHLNLHKTFCIPHGGGGPGMGPIGVK 812 (1058)
Q Consensus 746 ~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~------G----aDi~~~s~hKtf~~P~g~GGPg~G~i~~~ 812 (1058)
.+ .+++|.++|++||+++|+|+++ .|+.+.|.+ | +|++++ .|.++ +|| ++..+
T Consensus 268 ~~~~~yl~~lr~lc~~~g~lLI~DEV~----tGfGrtG~~fa~e~~gv~~~PDi~t~--gK~lg----~gG----~~~~~ 333 (464)
T TIGR00699 268 HASPDFFRKLRDITKKHNVAFIVDEVQ----TGVGATGKFWAHEHWNLDDPPDMVTF--SKKFQ----TAG----YFFHD 333 (464)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEeeee----eCCCCCcchhHHHhcCCCCCCCEEEe--hhhhc----cCC----ccccc
Confidence 41 3999999999999999999984 455555542 3 788776 47662 222 22222
Q ss_pred CCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---
Q 001531 813 KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--- 889 (1058)
Q Consensus 813 ~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~--- 889 (1058)
+.+... +. ....+++.|+++.++++.+.|..+-++++.+. .....++|.++|+++
T Consensus 334 ~~~~~~--~~-----------------~~~~~T~~gnp~~~aaa~a~L~~l~~~~l~~~---~~~~g~~l~~~L~~l~~~ 391 (464)
T TIGR00699 334 PAFRPN--KP-----------------YRQFNTWMGDPSRALILREIIQEIKRKDLLEN---VAHVGDYLYTGLEDLQKK 391 (464)
T ss_pred hhccCC--CC-----------------cccccCCCCCHHHHHHHHHHHHHHHhcCHHHH---HHHHHHHHHHHHHHHHHh
Confidence 211110 00 00112245677777778888888876665443 335567888888764
Q ss_pred CC-ee--ec--cCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHH
Q 001531 890 YP-IL--FR--GVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDA 964 (1058)
Q Consensus 890 ~~-v~--~~--g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~a 964 (1058)
++ ++ .. | .|.. +-+.++. ......+.+.+.++|+.+.... .+.|||.|+..+|++|||.++++
T Consensus 392 ~~~~i~~vRg~G-~Glm---~gie~~~-----~~~~~~i~~~~~~~Gvl~~~~g---~~~ir~~Ppl~it~~eid~~~~~ 459 (464)
T TIGR00699 392 YPEFIQNLRGKG-RGTF---IAWDTPD-----EAKRDKLLKKARNNGVNIGGCG---VKAIRLRPMLVFQKHHADIFLEI 459 (464)
T ss_pred CCCceeeecccC-eEEE---EEEecCC-----HHHHHHHHHHHHHCCcEEecCC---CCeEEEeCCCCCCHHHHHHHHHH
Confidence 44 21 12 2 1211 2233321 1125678899999999886432 37899999999999999999999
Q ss_pred HHHH
Q 001531 965 LISI 968 (1058)
Q Consensus 965 L~~i 968 (1058)
|.++
T Consensus 460 l~~~ 463 (464)
T TIGR00699 460 ISKI 463 (464)
T ss_pred HHHh
Confidence 9875
No 440
>PRK05839 hypothetical protein; Provisional
Probab=99.52 E-value=1.7e-12 Score=151.21 Aligned_cols=325 Identities=10% Similarity=0.009 Sum_probs=183.6
Q ss_pred cccccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCC--CceeeecCchHHHHHHHHH
Q 001531 589 HSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGF--DSFSLQPNAGAAGEYAGLM 666 (1058)
Q Consensus 589 ~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~--~~~~l~~~sGa~ge~a~ll 666 (1058)
+.++.|+.+.+.++.......+....-..++-|.+ .+|..++...+.+++.+.+|. +..++..++|++.. ...
T Consensus 24 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~Y~~---~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~a--l~~ 98 (374)
T PRK05839 24 YKGLDLTIGEPQFETPKFIQDALKNNAHLLNKYPK---SAGEESLREAQRGFFKRRFKIELKENELIPTFGTREV--LFN 98 (374)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHhhccCCCCC---CCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHH--HHH
Confidence 35677777766554331111110000001223333 357667777778888888784 45567777787632 223
Q ss_pred HHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcc
Q 001531 667 VIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHG 743 (1058)
Q Consensus 667 air~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G 743 (1058)
+++.+.. .++++.|+++.+.+..+...+.+.|++++.++.+++ ..+|+++. .+ +++++|++++| |.+|
T Consensus 99 ~~~~~~~---~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~--~~----~~~k~v~i~nP~NPTG 169 (374)
T PRK05839 99 FPQFVLF---DKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEK--EL----QEVDLVILNSPNNPTG 169 (374)
T ss_pred HHHHHhc---CCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchh--hh----ccccEEEEeCCCCCcC
Confidence 3332211 124578999988776666778899999999999754 34555433 23 46889999999 4788
Q ss_pred ccc--ccHHHHHHHHHHcCCEEEEeccCcccccCcCCC--Cc-------cCCc--EEEeCCccccccCCCCCCCceeEEE
Q 001531 744 VYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP--GY-------IGAD--VCHLNLHKTFCIPHGGGGPGMGPIG 810 (1058)
Q Consensus 744 ~i~--~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~p--g~-------~GaD--i~~~s~hKtf~~P~g~GGPg~G~i~ 810 (1058)
.+- +.+++|+++|+++|+++++|+++..-...-..| .. ...| |++.++.|+|+. .|.++|++.
T Consensus 170 ~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~----~GlRiG~ii 245 (374)
T PRK05839 170 RTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSA----PGLRSGFIA 245 (374)
T ss_pred cccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCC----ccceeEEEe
Confidence 874 368899999999999999999864211000011 00 0112 556778887754 478999999
Q ss_pred EeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccC
Q 001531 811 VKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHY 890 (1058)
Q Consensus 811 ~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~ 890 (1058)
+++++...+-.. +.....+.+...+.. +...+ ...+-+++..+....+.+++.+.|.
T Consensus 246 ~~~~~~~~~~~~--------------~~~~~~~~~~~~q~~----~~~~l--~~~~~~~~~~~~~~~~~~~~~~~l~--- 302 (374)
T PRK05839 246 GDASILKKYKAY--------------RTYLGCASPLPLQKA----AAVAW--LDDEHAEFFRNIYAKNLKLAREILG--- 302 (374)
T ss_pred cCHHHHHHHHHH--------------HhhcCCCCChHHHHH----HHHHh--ccchHHHHHHHHHHHHHHHHHHhcC---
Confidence 876655433100 000011111111211 11111 1223333444444445555554442
Q ss_pred CeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHH-CCccccC-CCCC----CCCEEEEEcCCCCCHHHHHHHHHH
Q 001531 891 PILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD-YGFHGPT-MSWP----VPGTLMIEPTESESKEELDRYCDA 964 (1058)
Q Consensus 891 ~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~-~Gi~~~~-~~~p----~~~~Lris~te~~t~eeid~fi~a 964 (1058)
+.. +++..+ ++++++ +..+++++|.+ +|+.+.. ..|. .++.+||+++. +.+++.+.++.
T Consensus 303 -~~~--p~gg~f--i~~~~~--------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~--~~~~~~~~l~~ 367 (374)
T PRK05839 303 -ITI--PPATFY--VWLPVD--------NDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVY--DTPKLEKALEI 367 (374)
T ss_pred -CCC--CCeeEE--EEEeCC--------ChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecC--CHHHHHHHHHH
Confidence 211 122222 455653 35688899875 9997643 2232 24899999964 57888888888
Q ss_pred HHHHH
Q 001531 965 LISIR 969 (1058)
Q Consensus 965 L~~i~ 969 (1058)
|++++
T Consensus 368 l~~~l 372 (374)
T PRK05839 368 IKTYL 372 (374)
T ss_pred HHHHh
Confidence 87765
No 441
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.52 E-value=1.7e-12 Score=151.18 Aligned_cols=285 Identities=14% Similarity=0.102 Sum_probs=170.2
Q ss_pred HHHHHHHHHhC--------CCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEE
Q 001531 636 NLGEWLCTITG--------FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSV 707 (1058)
Q Consensus 636 el~~~lael~G--------~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V 707 (1058)
++++.+++.++ .+..++..++|++.. +.+++.+.. .. +.++|+++.+.+..+...+++.|++++.+
T Consensus 70 ~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~a--l~~~~~~~~-~~---g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~ 143 (374)
T PRK02610 70 ALKQAIAEYVNESAAGSSQITPANISVGNGSDEL--IRSLLIATC-LG---GEGSILVAEPTFSMYGILAQTLGIPVVRV 143 (374)
T ss_pred HHHHHHHHHhCccccccCCCCHHHEEEcCChHHH--HHHHHHHHc-CC---CCCeEEEcCCChHHHHHHHHHcCCEEEEe
Confidence 44555555554 444556667776532 222222211 11 12379999887666666688999999999
Q ss_pred cCCCC-CCCCHHHHHHHHHhc-CCCeEEEEEEcCC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc
Q 001531 708 GTDAK-GNINIEELRKAAEAN-RDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (1058)
Q Consensus 708 ~~d~~-g~iD~e~L~~~i~~~-~~~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~ 782 (1058)
+.+++ ..+|+++|+++++++ ..++++|++++|+ .+|.+- +.+++|.+++ +|+++++|+++.. +.....+...
T Consensus 144 ~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~--~~~~iI~De~Y~~-~~~~~~~~~~ 220 (374)
T PRK02610 144 GRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLP--EDILVVIDEAYFE-FSQTTLVGEL 220 (374)
T ss_pred cCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhcc--CCcEEEEeccccc-cCccchHHHH
Confidence 98764 679999999998631 1478999999995 789986 1355555544 4899999998631 1111111111
Q ss_pred -CC-c-EEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHH
Q 001531 783 -GA-D-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 859 (1058)
Q Consensus 783 -Ga-D-i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~ 859 (1058)
.. . |++.|+.|+|+.| |.++|++.+++++.+.+-.. +...+++ .+.+. ++.+.
T Consensus 221 ~~~~~~ivi~SfSK~~g~~----GlRiG~~v~~~~l~~~l~~~--------------~~~~~~~--~~~q~----a~~~~ 276 (374)
T PRK02610 221 AQHPNWVILRTFSKAFRLA----AHRVGYAIGHPELIAVLEKV--------------RLPYNLP--SFSQL----AAQLA 276 (374)
T ss_pred hcCCCEEEEEecchhccCc----ccceeeeecCHHHHHHHHHh--------------cCCCCCC--HHHHH----HHHHH
Confidence 11 2 5567788888654 78999999887665543110 0001111 11222 11222
Q ss_pred HHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCC
Q 001531 860 IAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW 939 (1058)
Q Consensus 860 l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~ 939 (1058)
+. ..+.+.+..+...+..+.+.+.|+++..+.+. +.+..+ ++++++. +.+..++.+.|.++|+.+...
T Consensus 277 l~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-p~~g~f--~~~~l~~-----~~~~~~~~~~l~~~gi~v~~~-- 344 (374)
T PRK02610 277 LE--HRQELLAAIPEILQERDRLYQALQELPQLRVW-PSAANF--LYLRLSQ-----DAALAALHQALKAQGTLVRHT-- 344 (374)
T ss_pred hc--CHHHHHHHHHHHHHHHHHHHHHHHhCCCcEeC-CCcceE--EEEeCCC-----CCCHHHHHHHHHHCCEEEEeC--
Confidence 21 11233334444455566777778664222221 223222 4566642 457789999999999987532
Q ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001531 940 PVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1058)
Q Consensus 940 p~~~~Lris~te~~t~eeid~fi~aL~~i~~ 970 (1058)
.+.+||++. +.++++++++.|++++.
T Consensus 345 --~~~lRls~~---~~~~~~~~l~~l~~~l~ 370 (374)
T PRK02610 345 --GGGLRITIG---TPEENQRTLERLQAALT 370 (374)
T ss_pred --CCeEEEeCC---CHHHHHHHHHHHHHHHh
Confidence 478999986 35778888888887754
No 442
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.51 E-value=1e-11 Score=146.89 Aligned_cols=325 Identities=17% Similarity=0.173 Sum_probs=193.3
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCC--ceeeecCchHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIR 669 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~--~~~l~~~sGa~ge~a~llair 669 (1058)
..+|++.+++..++..+. ....+..+ +..+ .+...++.+.|++++... ...++.++|++++++++..+|
T Consensus 45 ~~lGh~~p~v~~a~~~ql-~~~~~~~~-~~~~-------~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr 115 (420)
T TIGR00700 45 LNIGHSHPRVVDAVRTQV-AEFTHTCF-MVTP-------YEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIAR 115 (420)
T ss_pred ccCCCCCHHHHHHHHHHH-HhccCccc-cccC-------ChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHH
Confidence 457888777766666552 22111111 0011 112346778888887422 234677899999988888888
Q ss_pred HHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCC--------c-----EEEEEcCCCCCC-----------CCHHHHHHHH
Q 001531 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG--------M-----KIVSVGTDAKGN-----------INIEELRKAA 724 (1058)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G--------~-----~vv~V~~d~~g~-----------iD~e~L~~~i 724 (1058)
.|. +|++|+ ...++||....+....| + .+..++.....+ -+++.+++.+
T Consensus 116 ~~t------gr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (420)
T TIGR00700 116 SYT------GRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIF 189 (420)
T ss_pred Hhc------CCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHH
Confidence 762 234454 67889998776554322 1 233344311111 1256777776
Q ss_pred H--hcCCCeEEEEEEcC-CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCc--------cCCcEEEeC
Q 001531 725 E--ANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY--------IGADVCHLN 790 (1058)
Q Consensus 725 ~--~~~~~taaV~vt~P-n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~--------~GaDi~~~s 790 (1058)
. .+++++++|+++.- ...|++.+ .+++|.++|++||+++++|+++ .|+.+.|. .-+|++++
T Consensus 190 ~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~----tg~gr~g~~~a~~~~~~~pDi~~l- 264 (420)
T TIGR00700 190 VIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQ----TGFARTGAMFACEHEGPEPDLITT- 264 (420)
T ss_pred HhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecc----cCCcccchhHHHhhcCCCCCEEEe-
Confidence 3 34578888888643 34566541 3899999999999999999985 34433331 23688764
Q ss_pred CccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHH
Q 001531 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1058)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1058)
.|.++ ||..+|++++++++++.+.... ..++ +.++++.++++.+.+..+..+++.+
T Consensus 265 -sK~l~-----~G~pig~v~~~~~i~~~~~~~~--------------~~~T----~~~~pl~~aaa~a~l~~l~~~~~~~ 320 (420)
T TIGR00700 265 -AKSLA-----DGLPLSGVTGRAEIMDAPAPGG--------------LGGT----YAGNPLACAAALAVLAIIESEGLIE 320 (420)
T ss_pred -ecccc-----CCcceEEEEecHHHHhhcCCCC--------------cCCC----CCcCHHHHHHHHHHHHHHHhccHHH
Confidence 57764 4577999999988766542110 0011 2345566666777777776666655
Q ss_pred HHHHHHHHHHHHHHHHhcc---CCee--eccCCCccceEEEEeccccc-cc-CCCCHHHHHHHHHHCCccccC-CCCCCC
Q 001531 871 ASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLK-NT-AGIEPEDVAKRLMDYGFHGPT-MSWPVP 942 (1058)
Q Consensus 871 ~a~~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~~~-~~-~g~~~~~v~k~L~~~Gi~~~~-~~~p~~ 942 (1058)
..+ ...++++++|++. ++.+ +.|. |.+ +.+.+.+-. .. .......+.+.+.++|+.+.. ..| .
T Consensus 321 ~~~---~~g~~l~~~L~~l~~~~~~~~~vrg~-G~~---~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f--~ 391 (420)
T TIGR00700 321 RAR---QIGRLVTDRLTTLKAVDPRIGDVRGL-GAM---IAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMF--G 391 (420)
T ss_pred HHH---HHHHHHHHHHHHHHhhCCCEEEeecc-ceE---EEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCC--C
Confidence 433 3445677777653 2221 2232 332 233321100 00 001135677777899998643 223 4
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001531 943 GTLMIEPTESESKEELDRYCDALISIR 969 (1058)
Q Consensus 943 ~~Lris~te~~t~eeid~fi~aL~~i~ 969 (1058)
+.+||+|....++++|++.++.|.+++
T Consensus 392 ~~lRl~p~l~~~~~~l~~~~~~l~~~l 418 (420)
T TIGR00700 392 NIIRFLPPLTIGDELLSEGLDILCAIL 418 (420)
T ss_pred CEEEEECCCCcCHHHHHHHHHHHHHHh
Confidence 789999988888999999999998875
No 443
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.51 E-value=1.8e-12 Score=151.21 Aligned_cols=287 Identities=15% Similarity=0.148 Sum_probs=185.1
Q ss_pred HHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc----
Q 001531 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 288 (1058)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~---- 288 (1058)
..++|+.+|+++|.+. +..+.+||++...++.++.+ ++||+||++...|+++...+. ..|++++.+|.
T Consensus 35 ~~~le~~la~~~g~~~--~v~~~sgt~al~lal~al~~--~~Gd~Viv~~~~~~~~~~~~~----~~G~~~v~vd~~~~~ 106 (379)
T PRK11658 35 NQALEQAFCQLTGNQH--AIAVSSATAGMHITLMALGI--GPGDEVITPSLTWVSTLNMIV----LLGATPVMVDVDRDT 106 (379)
T ss_pred HHHHHHHHHHHhCCCe--EEEECCHHHHHHHHHHHcCC--CCCCEEEECCCcHHHHHHHHH----HcCCEEEEEecCCCc
Confidence 4568899999999874 67789999888888777643 379999999999999987764 35888888764
Q ss_pred -----hhhhc-cCCCEeEEEEEcCCCceeeccHHHHHHHHHhcCcEEEEEeccccccCCC---CCCcccceEEEecC-cc
Q 001531 289 -----KDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK---PPGELGADIVVGSA-QR 358 (1058)
Q Consensus 289 -----~~l~~-l~~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~---~p~~~GaDivvgs~-k~ 358 (1058)
+++++ ++++|++|+..++ +|...|+++|.++|+++|+++++| ...++|... ..+.+|.|+..++. |.
T Consensus 107 ~~~d~~~l~~~i~~~tkav~~~~~--~G~~~d~~~i~~~a~~~gi~vi~D-~a~a~g~~~~~~~~g~~g~~~~Sf~~~K~ 183 (379)
T PRK11658 107 LMVTPEAIEAAITPRTKAIIPVHY--AGAPADLDAIRAIGERYGIPVIED-AAHAVGTYYKGRHIGARGTAIFSFHAIKN 183 (379)
T ss_pred CCcCHHHHHHhcccCCeEEEEeCC--CCCcCCHHHHHHHHHHcCCeEEEE-CCCccCCeECCeecCCCCCEEEeCCCCCc
Confidence 34555 7788998886664 899999999999999999999994 345665432 35778888777776 66
Q ss_pred cccccCCCCCceEEEEEe-hhhhhcCCC-cEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHH
Q 001531 359 FGVPMGYGGPHAAFLATS-QEYKRMMPG-RIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAV 436 (1058)
Q Consensus 359 lg~P~~~GGP~~G~l~~~-~~~~~~lpg-rivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~ 436 (1058)
+.+ | .+|++.++ +++.+++.. +..|...+.... .......+..+.+.|+ | .-+..+.||+-
T Consensus 184 l~~-----g-~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~----~~~~~~~~~~~~~~G~-n----~~~~~l~AAl~-- 246 (379)
T PRK11658 184 ITC-----A-EGGLVVTDDDELADRLRSLKFHGLGVDAFDR----QTQGRAPQAEVLTPGY-K----YNLADINAAIA-- 246 (379)
T ss_pred Ccc-----c-CceEEEECCHHHHHHHHHHHHcCCCcchhhh----hcccCCCcceeecccc-c----cCcCHHHHHHH--
Confidence 632 2 33566664 555544421 122321111000 0000011111112233 1 11234455552
Q ss_pred HhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEc-CC--C---CccEEEEecC----C--HHHHHHHHHHcCceeeec--
Q 001531 437 YHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ-GL--P---FFDTVKVKCA----D--AHAIASAAYKIEMNLRVV-- 502 (1058)
Q Consensus 437 ~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~-~~--~---~~~~v~i~~~----~--~~~l~~~L~~~GI~~~~~-- 502 (1058)
+...++++++.++..++++++.+.|++++ +..+ .+ . ....+++.++ + ..++.+.|.++||..+..
T Consensus 247 ~~ql~~l~~~~~~r~~~a~~~~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~~ 325 (379)
T PRK11658 247 LVQLAKLEALNARRREIAARYLQALADLP-FQPLSLPAWPHQHAWHLFIIRVDEERCGISRDALMEALKERGIGTGLHFR 325 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CccCcCCCCCCceeEEEEEEEECCccccCCHHHHHHHHHHCCCCCcccCc
Confidence 22235889999999999999999999886 4332 11 1 1123444432 2 678999999999865310
Q ss_pred -----------------------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001531 503 -----------------------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 503 -----------------------~~~~lris~~~~~t~edid~ll~al~ 528 (1058)
....+.+-++..-|++|++++++++.
T Consensus 326 ~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~ 374 (379)
T PRK11658 326 AAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQ 374 (379)
T ss_pred CcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHH
Confidence 01346666677778888888888775
No 444
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.51 E-value=2.8e-12 Score=146.84 Aligned_cols=272 Identities=17% Similarity=0.134 Sum_probs=169.4
Q ss_pred HHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCCC
Q 001531 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1058)
Q Consensus 635 ~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g~ 714 (1058)
.++++.+++.+|.+ ++..++|++. ++.++++. .++++|+++++.+..+...++..|++++.++.+
T Consensus 52 ~~Lr~~ia~~~~~~--~I~it~Gs~~--al~~~~~~-------~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~---- 116 (330)
T PRK05664 52 DGLEAAARAYYGAP--QLLPVAGSQA--AIQALPRL-------RAPGRVGVLSPCYAEHAHAWRRAGHQVRELDEA---- 116 (330)
T ss_pred HHHHHHHHHHhCCC--CEEECcCHHH--HHHHHHHc-------cCCCEEEEcCCChHHHHHHHHHcCCeEEEechh----
Confidence 36788999999976 3455566552 22222221 246789999886666666688999999998863
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc-CCc--EEE
Q 001531 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI-GAD--VCH 788 (1058)
Q Consensus 715 iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~-GaD--i~~ 788 (1058)
+++++++ +++++++++|| ++|.+- +++++|+++|+++|+++++|+++... ........+ ..| +++
T Consensus 117 ----~~~~~~~----~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~-~~~~s~~~~~~~~~vi~~ 187 (330)
T PRK05664 117 ----EVEAALD----SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDN-TPQHSLAACAHRPGLIVL 187 (330)
T ss_pred ----hHhhhhc----CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccC-CCcccccccccCCCEEEE
Confidence 4555553 56678888995 788875 35788888889999999999986321 110011111 222 556
Q ss_pred eCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhH
Q 001531 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl 868 (1058)
.++.|+|+.| |.++|++++++++.+.+-.. +...++++ ..+ .++...+.. .+-.
T Consensus 188 ~SfSK~~gl~----GlRiG~~v~~~~l~~~~~~~--------------~~~~~~~~--~~~----~~~~~~L~~--~~~~ 241 (330)
T PRK05664 188 RSFGKFFGLA----GARLGFVLAEPALLRALAEL--------------LGPWTVSG--PTR----WLAQAALAD--TPWQ 241 (330)
T ss_pred eeccccccCC----CcceEEEEeCHHHHHHHHHh--------------cCCCCCCH--HHH----HHHHHHHhC--hHHH
Confidence 6777877544 78999999987766543210 00011221 111 112222221 1223
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEE
Q 001531 869 TEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIE 948 (1058)
Q Consensus 869 ~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris 948 (1058)
++..+....+.+++.+.|++. .+... +....-+++..+ +..++.+.|.++||.+.. |..++.+||+
T Consensus 242 ~~~~~~~~~~r~~l~~~L~~~-~~~~~---~~~~~f~~~~~~--------~~~~~~~~l~~~gi~v~~--f~~~~~iRis 307 (330)
T PRK05664 242 RRQRERLLAASQRLAALLRRH-GLTPA---GGCALFQWVRTE--------DAAALHEFLARRGILTRL--FEQPASLRFG 307 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCccc---CCcceEEEEecC--------CHHHHHHHHHHCCeEEEE--CCCCCeEEEE
Confidence 444455556788899999875 22111 122111333321 568899999999999853 3335799999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 949 PTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 949 ~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
+.. +++++++|+++|+++.+|+
T Consensus 308 ~~~--~~~~~~~l~~al~~~~~~~ 329 (330)
T PRK05664 308 LPA--DEADWARLDQALLAYRKEA 329 (330)
T ss_pred CCC--CHHHHHHHHHHHHHHHhhc
Confidence 864 5789999999999887764
No 445
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.51 E-value=2.4e-12 Score=149.43 Aligned_cols=210 Identities=17% Similarity=0.108 Sum_probs=149.0
Q ss_pred HHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhh
Q 001531 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDID 292 (1058)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~~l~ 292 (1058)
..++++.+|++.|.+. +..+.+||+|+.++++++ + ++||+||++...+..+...+...+...|++++++|+++.+
T Consensus 66 ~~~lE~~la~leg~~~--av~~sSG~aAi~~al~al-l--~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~ 140 (384)
T PRK06434 66 VQAFEEKYAVLENAEH--ALSFSSGMGAITSAILSL-I--KKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLN 140 (384)
T ss_pred HHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHH-h--CCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCChh
Confidence 3457789999999876 788999999999888876 3 3899999998887777766655566789999999987544
Q ss_pred c--cCC-CEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccceEEEecC-cccccccCCCC
Q 001531 293 Y--KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1058)
Q Consensus 293 ~--l~~-~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~GaDivvgs~-k~lg~P~~~GG 367 (1058)
. +++ ++++|++..| |.++.+.|+++|+++||++| ++|| +.++.+....|-.+|+|++++|+ |.++++-.
T Consensus 141 ~~~l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD-~t~~s~~~~~pl~~gaDivv~S~tK~i~G~~d--- 214 (384)
T PRK06434 141 SLDFDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVD-ATFASPYNQNPLDLGADVVIHSATKYISGHSD--- 214 (384)
T ss_pred heeecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEE-CCCCCcccCCchhcCCCEEEeecccccCCCCC---
Confidence 3 555 6899999987 68999999999999999998 4563 44555666677789999999999 87765421
Q ss_pred CceEEEEEeh-hhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHH
Q 001531 368 PHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1058)
Q Consensus 368 P~~G~l~~~~-~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~i 446 (1058)
--+|.+.+++ ++.+++- ..|+..|.. . . ...|+ +...|-+-|..+
T Consensus 215 ~~gG~vv~~~~~~~~~~~-------------------------~~~~~~G~~-~---~---~~~A~--l~~~gL~tL~~R 260 (384)
T PRK06434 215 VVMGVAGTNNKSIFNNLV-------------------------ERRKTLGSN-P---D---PIQAY--LALRGLKTLGLR 260 (384)
T ss_pred ceEEEEecCcHHHHHHHH-------------------------HHHHhcCCC-C---C---HHHHH--HHHhCCCcHHHH
Confidence 1146666643 3332220 001111100 0 1 12222 245555667777
Q ss_pred HHHHHHHHHHHHHHHhcCCCe
Q 001531 447 AQRVHGLAGTFALGLKKLGTV 467 (1058)
Q Consensus 447 a~~~~~~a~~l~~~L~~~G~~ 467 (1058)
.++..+++..+++.|++.+.+
T Consensus 261 ~~r~~~~a~~~a~~L~~~p~v 281 (384)
T PRK06434 261 MEKHNKNGMELARFLRDSKKI 281 (384)
T ss_pred HHHHHHHHHHHHHHHHcCCCc
Confidence 788889999999999987644
No 446
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.51 E-value=5e-12 Score=145.86 Aligned_cols=268 Identities=15% Similarity=0.121 Sum_probs=179.0
Q ss_pred HHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchh----
Q 001531 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD---- 290 (1058)
Q Consensus 215 e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~~---- 290 (1058)
++++.+|++++.++.++.++.|++.+...++.++. .+||+|+++.-.|+.+...+ +..|++++.++.++
T Consensus 64 ~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~---~~gd~vlv~~P~y~~~~~~~----~~~g~~~~~v~~~~~~~~ 136 (353)
T PRK05387 64 ALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFF---NHDRPLLFPDITYSFYPVYA----GLYGIPYEEIPLDDDFSI 136 (353)
T ss_pred HHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhc---CCCCEEEEeCCCHHHHHHHH----HHcCCEEEEeecCCCCCC
Confidence 57789999999998899999999988777766652 37999999999987766554 34588888877641
Q ss_pred -hhccCCCEeEEEEEcC-CCceeeccHHHHHHHHHhc-CcEEEEEeccccccCC---CCCCcccceEEEecC-ccccccc
Q 001531 291 -IDYKSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN-GVKVVMATDLLALTIL---KPPGELGADIVVGSA-QRFGVPM 363 (1058)
Q Consensus 291 -l~~l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~-galliV~a~~~slg~l---~~p~~~GaDivvgs~-k~lg~P~ 363 (1058)
++++...+++|++.+| |.+|.+.+.+++.++++.+ |++++++.....++.- .......-.|+++|. |.|+.|
T Consensus 137 d~~~l~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~- 215 (353)
T PRK05387 137 DVEDYLRPNGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLA- 215 (353)
T ss_pred CHHHHHhcCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcch-
Confidence 2223335677888888 6899999999999999876 8888884311112110 001123346888886 988754
Q ss_pred CCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccH
Q 001531 364 GYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGL 443 (1058)
Q Consensus 364 ~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl 443 (1058)
|..+||+++++++++.+. +.+...+..+...+ +..++. ..+...+.+
T Consensus 216 ---GlR~G~~~~~~~~~~~l~----------------------------~~~~~~~~~~~~~~-~q~~~~-~~l~~~~~~ 262 (353)
T PRK05387 216 ---GLRVGFAIGHPELIEALN----------------------------RVKNSFNSYPLDRL-AQAGAI-AAIEDEAYF 262 (353)
T ss_pred ---hhhceeeecCHHHHHHHH----------------------------HhhccCCCCCcCHH-HHHHHH-HHhcCHHHH
Confidence 446789988877765541 00110011111111 111221 112223446
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC--HHHHHHHHHHcCceeeecc----CCeEEEEeccCCCH
Q 001531 444 KTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVVD----SNTVTASFDETTTL 517 (1058)
Q Consensus 444 ~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~--~~~l~~~L~~~GI~~~~~~----~~~lris~~~~~t~ 517 (1058)
+++.+++.++.+++.+.|+++| +++.... ..-+.+..++ ..++.+.|.++||.++... .+.+|++++ +.
T Consensus 263 ~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~ 337 (353)
T PRK05387 263 EETRAKVIATRERLVEELEALG-FEVLPSK-ANFVFARHPSHDAAELAAKLRERGIIVRHFNKPRIDQFLRITIG---TD 337 (353)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC-CeECCCc-CcEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC---CH
Confidence 7788888899999999999987 8765321 1123345443 7889999999999886542 368999987 67
Q ss_pred HHHHHHHHHHh
Q 001531 518 EDVDKLFIVFA 528 (1058)
Q Consensus 518 edid~ll~al~ 528 (1058)
+++++++++|.
T Consensus 338 ~~~~~~~~~L~ 348 (353)
T PRK05387 338 EEMEALVDALK 348 (353)
T ss_pred HHHHHHHHHHH
Confidence 99999999985
No 447
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.51 E-value=7.6e-12 Score=150.49 Aligned_cols=314 Identities=15% Similarity=0.121 Sum_probs=182.1
Q ss_pred hcHHHHHHHHHHHHHHHhCCC--ceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEE
Q 001531 628 QGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1058)
Q Consensus 628 qG~~~~~~el~~~lael~G~~--~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv 705 (1058)
+|..++...+.+++.+..|.+ ...+..++|++. ++.++++.+.. .++|.|+++.+.+..+...++..|.+++
T Consensus 115 ~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~--al~~~~~~l~~----~~gD~Vlv~~P~y~~y~~~~~~~g~~~v 188 (481)
T PTZ00377 115 AGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASS--GIKLLLQLLIG----DPSDGVMIPIPQYPLYSAAITLLGGKQV 188 (481)
T ss_pred cCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHH--HHHHHHHHhcc----CCCCEEEECCCCchhHHHHHHHcCCEEE
Confidence 466666666666666555654 345666666553 23333343321 2568999999877777777889999999
Q ss_pred EEcCCCC--CCCCHHHHHHHHHhc---CCCeEEEEEEcC-CCccccc--ccHHHHHHHHHHcCCEEEEeccCcc-cc-cC
Q 001531 706 SVGTDAK--GNINIEELRKAAEAN---RDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQ-VG 775 (1058)
Q Consensus 706 ~V~~d~~--g~iD~e~L~~~i~~~---~~~taaV~vt~P-n~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~-al-~g 775 (1058)
.++++++ ..+|+++|+++++.. ..++++|++.+| |.+|.+- +.+++|+++|+++|+++++|+++.. .. .+
T Consensus 189 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~ 268 (481)
T PTZ00377 189 PYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGE 268 (481)
T ss_pred EEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCC
Confidence 9998754 479999999998631 127888888899 5799985 3599999999999999999998642 11 11
Q ss_pred --cCCC----CccCC------c-EEEeCCcccc-ccCCCCCCCceeEEEE---eCCCCCCCCCCCcccCCCCCCCCCCCC
Q 001531 776 --LTSP----GYIGA------D-VCHLNLHKTF-CIPHGGGGPGMGPIGV---KKHLAPFLPSHPVVSTGGIPAPEKSQP 838 (1058)
Q Consensus 776 --l~~p----g~~Ga------D-i~~~s~hKtf-~~P~g~GGPg~G~i~~---~~~l~~~lpg~~vg~~~d~g~~~~~~~ 838 (1058)
+... ..+.. . |+..++.|+| ++| |.++|++.+ ++++.+.+-.. +.
T Consensus 269 ~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~----GlRiG~~~~~~~p~~li~~l~~~--------------~~ 330 (481)
T PTZ00377 269 KPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGEC----GRRGGYFELTNIPPEVREQIYKL--------------AS 330 (481)
T ss_pred CCcccHHHHHHhhcccccCCeEEEEEecCCcccccCC----cCceEEEEEeCCCHHHHHHHHHH--------------hh
Confidence 1110 01111 1 4456788874 443 889999987 55554433100 00
Q ss_pred CCCCCccchhhHHHHHHHHHHHHH--Hchhh---H----HHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEec
Q 001531 839 LGTIAAAPWGSALILPISYTYIAM--MGSKG---L----TEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDL 909 (1058)
Q Consensus 839 t~~i~sa~~g~~~~~~~a~a~l~~--lG~eG---l----~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~ 909 (1058)
...+++..+|.. +.+++.. .+... + ++..+...++.+++.+.|+++..+.+..+++.++ +++++
T Consensus 331 -~~~~~~~~~Q~a----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~f--l~~~~ 403 (481)
T PTZ00377 331 -INLCSNVVGQLM----TGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMY--AFPRI 403 (481)
T ss_pred -eecCCChHHHHH----HHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEE--EEeec
Confidence 111222222322 2222211 01111 1 1122223466778888887752333333334332 33343
Q ss_pred c--c-ccc---cCCC-CHHHHH-HHHHHCCccc-cCCCCC---CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001531 910 R--G-LKN---TAGI-EPEDVA-KRLMDYGFHG-PTMSWP---VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1058)
Q Consensus 910 ~--~-~~~---~~g~-~~~~v~-k~L~~~Gi~~-~~~~~p---~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~~ 974 (1058)
+ . ... ..+. +..+++ +.|.++|+.+ +...|. ..+++||++. .+.+++++.++.|.+++++..+
T Consensus 404 ~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~--~~~e~l~~~l~rl~~~~~~~~~ 478 (481)
T PTZ00377 404 ELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL--PPEEQIEEMVKKIKEFHESFMK 478 (481)
T ss_pred cCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHHHH
Confidence 2 0 000 0001 123344 4455789874 333342 2358999997 5678999999999988776544
No 448
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.51 E-value=2.6e-12 Score=152.08 Aligned_cols=326 Identities=14% Similarity=0.185 Sum_probs=190.5
Q ss_pred cccccccccCCc--ccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhC---CCceeeecCchHHHHHHHH
Q 001531 591 MIPLGSCTMKLN--ATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG---FDSFSLQPNAGAAGEYAGL 665 (1058)
Q Consensus 591 ~i~lGs~t~~~~--~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G---~~~~~l~~~sGa~ge~a~l 665 (1058)
...+|++.+++. .++..+. ....+........ ..+...++.++|+++++ ++. .++.+||++++++++
T Consensus 49 ~~~lGh~~p~v~~~~ai~~q~-~~~~~~~~~~~~~------~~~~~~~l~~~l~~~~~~~~~~~-v~f~~sGsEAve~Al 120 (431)
T TIGR03251 49 SMALGMNHPALVDDLAFRARL-GAAAVNKPSNSDV------YTVAMARFVDTFARVLGDPALPH-LFFIEGGALAVENAL 120 (431)
T ss_pred hcCCCCCChhhhHHHHHHHHH-HHhhhcccccCCC------CCHHHHHHHHHHHHhcCCCCcCE-EEEeCCcHHHHHHHH
Confidence 346899988876 4444442 2111100001010 01224466677777762 333 467889999999999
Q ss_pred HHHHHHHH----HcCCCC--CCEEE-EcCCCCCccHHHHHhCCcE-----------EEEE--c-----CCCCC-------
Q 001531 666 MVIRAYHK----ARGDHH--RNVCI-IPVSAHGTNPATAAMCGMK-----------IVSV--G-----TDAKG------- 713 (1058)
Q Consensus 666 lair~y~~----~~G~~~--r~~Vl-ip~saHg~~pa~a~~~G~~-----------vv~V--~-----~d~~g------- 713 (1058)
..+|.|.. .+|..+ +.+|| ...++||....+....|-+ ...+ | .+.+.
T Consensus 121 klAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 200 (431)
T TIGR03251 121 KTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIAL 200 (431)
T ss_pred HHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccccchhhHH
Confidence 99998852 234211 34565 5678999876654433311 0011 1 11110
Q ss_pred -CCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc---ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCc-------
Q 001531 714 -NINIEELRKAAEANRDNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY------- 781 (1058)
Q Consensus 714 -~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~------- 781 (1058)
..+++++++.++++.+++++|+++.- +..|++. ..+++|.++|++||+++++|+++ .|+.+.|.
T Consensus 201 ~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~----tG~GrtG~~~a~~~~ 276 (431)
T TIGR03251 201 EEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQ----TGVGLTGTAWAYQQL 276 (431)
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecch----hccCccchHHHHHhc
Confidence 12356677788766789999999854 4557653 36999999999999999999984 45555653
Q ss_pred -cCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHH
Q 001531 782 -IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 860 (1058)
Q Consensus 782 -~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l 860 (1058)
..+|++++ .|.+ |.+|++..++ +.... ...+.. . +...+++.|+++.++++.+.|
T Consensus 277 gv~PDi~~~--gK~~--------~~~g~~~~~~-i~~~~-~~~~~~--------~----~~~~~T~~gnpl~~aaa~a~L 332 (431)
T TIGR03251 277 GVQPDIVAF--GKKT--------QVCGIMAGRR-VDEVA-DNVFAV--------P----SRLNSTWGGNLVDMVRATRIL 332 (431)
T ss_pred CCCCCEEEe--cccC--------ccceEEecch-HHHhh-hhcccC--------c----cccCCCCCCCHHHHHHHHHHH
Confidence 24788876 4654 3445564432 21110 000000 0 011122345667777788888
Q ss_pred HHHchhhHHHHHHHHHHHHHHHHHHHhcc---CC-ee--eccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccc
Q 001531 861 AMMGSKGLTEASKIAILNANYMAKRLEKH---YP-IL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 934 (1058)
Q Consensus 861 ~~lG~eGl~~~a~~~~~~a~yL~~~L~~~---~~-v~--~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~ 934 (1058)
..+..+++.+. .....++|.++|++. ++ +. ..|. |.. +.+.++. ......+.+.|.++|+.+
T Consensus 333 ~~l~~~~l~~~---~~~~g~~l~~~L~~l~~~~~~~i~~vrg~-G~~---~~i~~~~-----~~~~~~~~~~l~~~Gvl~ 400 (431)
T TIGR03251 333 EIIEEERLVDN---ARVQGAHLLARLHELAAEFPHLVSNPRGR-GLM---CAFDLPS-----TADRDEVIRQLYREGVLL 400 (431)
T ss_pred HHHHhcCHHHH---HHHHHHHHHHHHHHHHHhCccceeccccc-cee---EEEEeCC-----HHHHHHHHHHHHhCCeEE
Confidence 88877665433 334556777777653 33 32 1221 221 2233321 112457899999999987
Q ss_pred cCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 001531 935 PTMSWPVPGTLMIEPTESESKEELDRYCDALIS 967 (1058)
Q Consensus 935 ~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~ 967 (1058)
.... .+.+|++|+..+|++|||+++++|.+
T Consensus 401 ~~~g---~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 401 LGCG---ERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred ecCC---CCeEEEECCccCCHHHHHHHHHHHHh
Confidence 4222 36799999999999999999999875
No 449
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.51 E-value=3.3e-12 Score=146.33 Aligned_cols=276 Identities=13% Similarity=0.115 Sum_probs=172.5
Q ss_pred HHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCCC
Q 001531 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1058)
Q Consensus 635 ~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g~ 714 (1058)
.++++.+++.+|.+...+..++|++. +..++++.. +++ .|+++.+.+..+...++..|++++.+|+++. .
T Consensus 43 ~~lr~~ia~~~~~~~~~I~it~Gs~~--~l~~~~~~~------~~~-~vv~~~P~y~~y~~~~~~~G~~v~~vp~~~~-~ 112 (332)
T PRK06425 43 TDIEDQIKIYTQGLKIKVLIGPGLTH--FIYRLLSYI------NVG-NIIIVEPNFNEYKGYAFTHGIRISALPFNLI-N 112 (332)
T ss_pred HHHHHHHHHHhCCCcceEEECCCHHH--HHHHHHHHh------CCC-cEEEeCCChHHHHHHHHHcCCeEEEEeCCcc-c
Confidence 47889999999999877777777753 233333321 123 3666676555566668899999999998753 3
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCcccc-cCcCCC----CccCCcE
Q 001531 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLTSP----GYIGADV 786 (1058)
Q Consensus 715 iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~al-~gl~~p----g~~GaDi 786 (1058)
.|.+.+++ .++++|++++|| ++|.+- +.+++|.++|+++|+++++|+++..-. .+.... ...+-=|
T Consensus 113 ~~~~~l~~------~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi 186 (332)
T PRK06425 113 NNPEILNN------YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVI 186 (332)
T ss_pred CcHHHHhh------cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEE
Confidence 46555432 367788999995 789875 358888999999999999999863111 110000 0111124
Q ss_pred EEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001531 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1058)
Q Consensus 787 ~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1058)
++.++.|+|++| |.++|++.+++++.+.+-.. .....++ . . + ..++.....+
T Consensus 187 ~~~SfSK~~~l~----GlRiGy~v~~~~li~~l~~~--------------~~~~~~~-----~-~-~---~~~l~~~~~~ 238 (332)
T PRK06425 187 IGRSLTKILGIP----SLRIGYIATDDYNMKISRKI--------------TEPWSVC-----D-P-A---IDFIRSIDLD 238 (332)
T ss_pred EEeecHHhcCCc----hhhheeeecCHHHHHHHHHc--------------CCCCccC-----H-H-H---HHHHHHhhhH
Confidence 556778887654 78899999987766543210 0001111 1 1 1 1122222222
Q ss_pred hH-HHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCcccc-CCCCC-C-
Q 001531 867 GL-TEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP-TMSWP-V- 941 (1058)
Q Consensus 867 Gl-~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~-~~~~p-~- 941 (1058)
.+ ++..+...++.+++.+.|++. +.+ +..+.+.+ +++.++ +..++.+.|.++||.+. ...|+ .
T Consensus 239 ~~~~~~~~~~~~~r~~l~~~L~~~g~~~-~~~~~g~f---~~~~~~--------~~~~~~~~l~~~gi~v~~~~~f~~~~ 306 (332)
T PRK06425 239 YVAKHSLDIMENERSYLINNLEAMGFRA-AGDPSANF---ITFMIP--------DAHDFYSYLLKNGILVRLLDDYECLG 306 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEE-CCCCCceE---EEEEcC--------CHHHHHHHHHHCCeEEEECCCCCCCC
Confidence 22 344555557778888999875 333 21122222 445542 46889999999999864 33342 2
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001531 942 PGTLMIEPTESESKEELDRYCDALISIR 969 (1058)
Q Consensus 942 ~~~Lris~te~~t~eeid~fi~aL~~i~ 969 (1058)
++.+||++. +.++.++|+++|++++
T Consensus 307 ~~~iRis~~---~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 307 EQYIRIAIR---RRSFNIKLVNALRNFL 331 (332)
T ss_pred CCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 468999984 6789999999998764
No 450
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.50 E-value=3.5e-12 Score=151.26 Aligned_cols=330 Identities=16% Similarity=0.196 Sum_probs=198.0
Q ss_pred ccccccccCCcc--cccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhC---CCceeeecCchHHHHHHHHH
Q 001531 592 IPLGSCTMKLNA--TTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG---FDSFSLQPNAGAAGEYAGLM 666 (1058)
Q Consensus 592 i~lGs~t~~~~~--~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G---~~~~~l~~~sGa~ge~a~ll 666 (1058)
..+|++.+++.. ++..+.... .+...+.... ..+...++.+.|+++++ ++ -.++.+||++++++++.
T Consensus 57 ~~lGh~~p~v~~~~ai~~ql~~l-~~~~~~~~~~------~~~~~~~la~~l~~~~~p~~~~-~v~f~~SGsEAve~AlK 128 (443)
T PRK08297 57 SALGMNHPALADDPEFRAELGRA-ALNKPSNSDV------YTVEMARFVDTFARVLGDPELP-HLFFVDGGALAVENALK 128 (443)
T ss_pred hcCCCCChHHhhHHHHHHHHHHh-hhhccccCCc------CCHHHHHHHHHHHhhcCCCCCC-EEEEeCchHHHHHHHHH
Confidence 468999888776 555552110 1100000000 01234467788888872 33 34778899999999999
Q ss_pred HHHHHHH----HcCC--CCCCEEE-EcCCCCCccHHHHHhCCcE-----------EEEEcCC--------CC-------C
Q 001531 667 VIRAYHK----ARGD--HHRNVCI-IPVSAHGTNPATAAMCGMK-----------IVSVGTD--------AK-------G 713 (1058)
Q Consensus 667 air~y~~----~~G~--~~r~~Vl-ip~saHg~~pa~a~~~G~~-----------vv~V~~d--------~~-------g 713 (1058)
.+|.|.. .+|. .+|.+|| +..++||....+....|-. ...++.. .+ .
T Consensus 129 lAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (443)
T PRK08297 129 VAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALE 208 (443)
T ss_pred HHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHH
Confidence 8888853 2342 1245566 5678999876655433311 0011100 00 0
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc---ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc-------
Q 001531 714 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------- 782 (1058)
Q Consensus 714 ~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~------- 782 (1058)
.-|++++++.++++.+++++|+++.- ...|++. ..+++|.++|++||+++++|+++ .|+.+.|.+
T Consensus 209 ~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~----tGfGRtG~~~a~~~~g 284 (443)
T PRK08297 209 AEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQ----TGVGLTGTAWAYQQLG 284 (443)
T ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh----hccCccchHHHHHhcC
Confidence 01456778888777789999998753 3456663 36999999999999999999984 466666542
Q ss_pred -CCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHH
Q 001531 783 -GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 861 (1058)
Q Consensus 783 -GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~ 861 (1058)
-+|++++ .|.+ | .+|.+..+ ++...+.. .+.. . ....+++.|+++.++++.+.|.
T Consensus 285 v~PDiv~~--gK~l--~------~~a~l~~~-~i~~~~~~-~~~~--------~----~~~~~T~~gnpl~~aaa~a~L~ 340 (443)
T PRK08297 285 VRPDIVAF--GKKT--Q------VCGIMAGR-RVDEVEDN-VFAV--------S----SRINSTWGGNLVDMVRARRILE 340 (443)
T ss_pred CCCCEEEe--cccc--c------ccceecch-HHHHhhhh-hccC--------c----cccCCCCCccHHHHHHHHHHHH
Confidence 3788876 5865 2 22344333 22111100 0000 0 0112224467777788888888
Q ss_pred HHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee---eccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCcccc
Q 001531 862 MMGSKGLTEASKIAILNANYMAKRLEKH---YPIL---FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 935 (1058)
Q Consensus 862 ~lG~eGl~~~a~~~~~~a~yL~~~L~~~---~~v~---~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~ 935 (1058)
.+.++++.+ +.....++|.++|+++ ++.+ +.|. |. + +.+.+.. ......+.++|.++|+.+.
T Consensus 341 ~l~~~~l~~---~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~-G~-~--~~i~~~~-----~~~~~~~~~~l~~~Gvl~~ 408 (443)
T PRK08297 341 VIEEDGLVE---NAARQGEYLLARLEELAAEFPAVVSNVRGR-GL-M--CAFDLPT-----TADRDEVIRRLWEEGVLVL 408 (443)
T ss_pred HHHhcCHHH---HHHHHHHHHHHHHHHHHHHCCCcceeeecc-ce-E--EEEEecC-----HHHHHHHHHHHHHCCEEEe
Confidence 887766544 3445677888888764 3321 2232 32 2 2233321 1134678899999999874
Q ss_pred CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 936 TMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 936 ~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
... .+.+||+|+..+|++|||+++++|.+++.++
T Consensus 409 ~~~---~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 409 PCG---ERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred cCC---CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 322 3679999999999999999999999987654
No 451
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.50 E-value=9.6e-12 Score=148.29 Aligned_cols=332 Identities=16% Similarity=0.182 Sum_probs=195.2
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCC--ceeeecCchHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIR 669 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~--~~~l~~~sGa~ge~a~llair 669 (1058)
+.+|++.+++..++..+. ....+.....+ ..+...++.+.|+++++.. ...++.++|++++++++..+|
T Consensus 66 ~~lGh~~p~v~~ai~~q~-~~~~~~~~~~~--------~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr 136 (451)
T PRK06918 66 INVGHSHPKVKEALHKQV-DQYIHTGFNVM--------MYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIAR 136 (451)
T ss_pred cCCCCCCHHHHHHHHHHH-HhccCcccccc--------ccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHH
Confidence 467888777776666552 21111110000 0123457888999998532 245788999999988888888
Q ss_pred HHHHHcCCCCCCEEE-EcCCCCCccHHHHHhCCc-------------EEEEEcCCC-----CCCCC-------HHHHHHH
Q 001531 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------------KIVSVGTDA-----KGNIN-------IEELRKA 723 (1058)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHg~~pa~a~~~G~-------------~vv~V~~d~-----~g~iD-------~e~L~~~ 723 (1058)
.|. +|++|| ...++||....+....|- .+..+|... .+..+ ++.+++.
T Consensus 137 ~~t------gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (451)
T PRK06918 137 KYT------KRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNF 210 (451)
T ss_pred HHh------CCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHH
Confidence 773 244455 567899988766543221 133344311 11111 2234444
Q ss_pred HHh--cCCCeEEEEEEcCC-Cccccc---ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCC------ccC--CcEEEe
Q 001531 724 AEA--NRDNLSTLMVTYPS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG------YIG--ADVCHL 789 (1058)
Q Consensus 724 i~~--~~~~taaV~vt~Pn-~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg------~~G--aDi~~~ 789 (1058)
+.. ..+++++|+++.-. ..|++. ..+++|.++|++||++++.|+++. ++.+.| .++ +|++++
T Consensus 211 ~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~t----g~gr~g~~~a~~~~~v~pDi~t~ 286 (451)
T PRK06918 211 FISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQT----GFARTGKYFAIEHFDVVPDLITV 286 (451)
T ss_pred HHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc----CcCccCceehhHhcCCCCCEEee
Confidence 421 23678888886533 346543 248999999999999999999853 333333 234 787654
Q ss_pred CCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHH
Q 001531 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1058)
Q Consensus 790 s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1058)
.|.++ +|..+|++++++++++.+.... ..+. +.|+.+.++++.+.+..+..+++.
T Consensus 287 --sK~l~-----~G~pig~v~~~~~i~~~~~~~~--------------~~~T----~~g~~l~~aaa~a~l~~i~~~~~~ 341 (451)
T PRK06918 287 --SKSLG-----AGVPISGVIGRKEIMDESAPGE--------------LGGT----YAGSPLGCAAALAVLDIIEKENLN 341 (451)
T ss_pred --ehhhc-----CCCccEEEEEcHHHHhccCCCC--------------cCcC----CCcCHHHHHHHHHHHHHHHHCCHH
Confidence 58774 4567999999877665442100 0111 224556666666677766555555
Q ss_pred HHHHHHHHHHHHHHHHHhcc---CCee--eccCCCccceEEEEeccc-ccccCCCCHHHHHHHHHHCCccccCC-CCCCC
Q 001531 870 EASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRG-LKNTAGIEPEDVAKRLMDYGFHGPTM-SWPVP 942 (1058)
Q Consensus 870 ~~a~~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~-~~~~~g~~~~~v~k~L~~~Gi~~~~~-~~p~~ 942 (1058)
+.. ....+++.++|+++ +++. +.|. |.. .-+.+..+. .+.........+.+.|.++|+.+... .| .
T Consensus 342 ~~~---~~~g~~l~~~l~~l~~~~~~~~~vrg~-G~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~--~ 414 (451)
T PRK06918 342 DRA---IELGKVVMNRFEEMKNKYNCIGDVRGL-GAM-CAFELVQDRKTKEPDKTLTANICKEANKRGLLLLSAGTY--G 414 (451)
T ss_pred HHH---HHHHHHHHHHHHHHHhhCCCceeeccc-eeE-EEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEeecCCC--C
Confidence 433 34456777777654 3321 2232 322 212221010 00000112456788888999986432 22 4
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001531 943 GTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1058)
Q Consensus 943 ~~Lris~te~~t~eeid~fi~aL~~i~~e~~~ 974 (1058)
+.+||+|+...|+++||+++++|.+++.++.+
T Consensus 415 ~~lrl~p~l~~t~~~id~~l~~l~~~l~~~~~ 446 (451)
T PRK06918 415 NVIRVLMPLVITDEQLEEGLTIIEESLQACYE 446 (451)
T ss_pred CEEEEECCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 78999999888999999999999999988755
No 452
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.50 E-value=5.7e-12 Score=151.47 Aligned_cols=308 Identities=15% Similarity=0.219 Sum_probs=183.4
Q ss_pred hhcHHHHHHHHHHHHHHHhC----CCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHH-hCC
Q 001531 627 AQGYQEMFNNLGEWLCTITG----FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA-MCG 701 (1058)
Q Consensus 627 ~qG~~~~~~el~~~lael~G----~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~-~~G 701 (1058)
.+|..++...+.+++.+..| ++...+..++|+++. ..++++.+. .+++.|+++.+.++.+...+. ..|
T Consensus 93 ~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~a--l~~l~~~l~-----~pGD~Vlv~~P~Y~~~~~~~~~~~G 165 (496)
T PLN02376 93 YHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGA--NETIMFCLA-----DPGDVFLIPSPYYAAFDRDLRWRTG 165 (496)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHH--HHHHHHHhC-----CCCCEEEECCCCccchHHHHHhhCC
Confidence 45776767677777777666 555566666676532 233333331 356899999987777766566 589
Q ss_pred cEEEEEcCCC--CCCCCHHHHHHHHHh---cCCCeEEEEEEcC-CCccccc--ccHHHHHHHHHHcCCEEEEeccCccc-
Q 001531 702 MKIVSVGTDA--KGNINIEELRKAAEA---NRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA- 772 (1058)
Q Consensus 702 ~~vv~V~~d~--~g~iD~e~L~~~i~~---~~~~taaV~vt~P-n~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~a- 772 (1058)
++++.|+++. ++.+|++++++++.+ .+.++++|++++| |++|.+- +.+++|.++|+++|+++++|+++...
T Consensus 166 ~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~ 245 (496)
T PLN02376 166 VEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATV 245 (496)
T ss_pred CEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccc
Confidence 9999999963 467999999876532 2357899999999 4789885 35888999999999999999987421
Q ss_pred ccC--cCCC----Ccc-----CCcE--EEeCCccccccCCCCCCCceeEEEEeC-CCCCCCCCCCcccCCCCCCCCCCCC
Q 001531 773 QVG--LTSP----GYI-----GADV--CHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQP 838 (1058)
Q Consensus 773 l~g--l~~p----g~~-----GaDi--~~~s~hKtf~~P~g~GGPg~G~i~~~~-~l~~~lpg~~vg~~~d~g~~~~~~~ 838 (1058)
+.+ +.+. .+. ..|. ++.+++|.|+.| |.++|++++.. .+...+. ....
T Consensus 246 f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glp----GlRvG~li~~~~~l~~~~~--------------~~~~ 307 (496)
T PLN02376 246 FAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLP----GFRVGIVYSFNDSVVSCAR--------------KMSS 307 (496)
T ss_pred cCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCC----cceEEEEEECCHHHHHHHH--------------HHhh
Confidence 111 1110 010 1232 356888988655 78999999853 3322110 0001
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHHchhh-----HHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccc
Q 001531 839 LGTIAAAPWGSALILPISYTYIAMMGSKG-----LTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGL 912 (1058)
Q Consensus 839 t~~i~sa~~g~~~~~~~a~a~l~~lG~eG-----l~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~ 912 (1058)
...+++ ..+. ++. .++.... +.+..++...+.+++.+.|++. +++. .+++.++ ++++++..
T Consensus 308 ~~~vs~--~~Q~----a~~---~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~--~~~aG~f--lwi~l~~~ 374 (496)
T PLN02376 308 FGLVSS--QTQL----MLA---SMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACL--TSNAGLF--AWMDLRHL 374 (496)
T ss_pred cCCCCH--HHHH----HHH---HHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccc--CCCceEE--EEEEchhh
Confidence 111221 1121 111 1222211 2233444455667777888764 3332 2233332 56777532
Q ss_pred ccc-CCC-CHHHHHHHHHH-CCcccc-CCCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001531 913 KNT-AGI-EPEDVAKRLMD-YGFHGP-TMSWP--VPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1058)
Q Consensus 913 ~~~-~g~-~~~~v~k~L~~-~Gi~~~-~~~~p--~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~ 973 (1058)
... ... +..++.+.|.+ .|+.+. ...|. .++.+||++.. .++++++..++.|++++.+-+
T Consensus 375 ~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~-~~~~~l~~al~rl~~~l~~~~ 440 (496)
T PLN02376 375 LRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFAN-MDDDTLHVALGRIQDFVSKNK 440 (496)
T ss_pred hccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeC-CCHHHHHHHHHHHHHHHHHhh
Confidence 110 001 23578888876 598853 33342 36899999975 235777777777777765433
No 453
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.50 E-value=5.6e-13 Score=135.68 Aligned_cols=161 Identities=27% Similarity=0.379 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHh--CCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccH-HHHHhCCcEEEEEcCC
Q 001531 634 FNNLGEWLCTIT--GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP-ATAAMCGMKIVSVGTD 710 (1058)
Q Consensus 634 ~~el~~~lael~--G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~p-a~a~~~G~~vv~V~~d 710 (1058)
+.++++++++++ +.+.+.+.+ +|+.+...++++++ +++++|++++..|+.+. ..+...|++++.++.+
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~-~~t~a~~~~~~~~~--------~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 72 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVP-SGTGANEAALLALL--------GPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVD 72 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeC-CcHHHHHHHHHHhC--------CCCCEEEEeecccceehhhHHHhcCCEEEEeccC
Confidence 357899999999 555554544 66666555544432 13568999888887777 6778899999999987
Q ss_pred CCCCCCH--HHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCc--CCCCccCCc
Q 001531 711 AKGNINI--EELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL--TSPGYIGAD 785 (1058)
Q Consensus 711 ~~g~iD~--e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl--~~pg~~GaD 785 (1058)
.++..+. +.+++... .++++++++++|+ ..|... ++++|+++||++|+++++|+++....... ..+...++|
T Consensus 73 ~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~g~~~-~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d 149 (170)
T cd01494 73 DAGYGGLDVAILEELKA--KPNVALIVITPNTTSGGVLV-PLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGAD 149 (170)
T ss_pred CCCccchhhhhhhhccc--cCceEEEEEecCcCCCCeEc-CHHHHHHHHHHcCCEEEEecccccccccccccccccccCC
Confidence 6654433 35544432 4789999999986 467766 68999999999999999999875322221 023456899
Q ss_pred EEEeCCccccccCCCCCCCceeEEEEe
Q 001531 786 VCHLNLHKTFCIPHGGGGPGMGPIGVK 812 (1058)
Q Consensus 786 i~~~s~hKtf~~P~g~GGPg~G~i~~~ 812 (1058)
+++.++||+| |+||+|++.+|
T Consensus 150 ~~~~s~~K~~------~~~~~G~l~~~ 170 (170)
T cd01494 150 VVTFSLHKNL------GGEGGGVVIVK 170 (170)
T ss_pred EEEEEccccc------CCCceEEEEeC
Confidence 9999999998 35899999875
No 454
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.50 E-value=9.9e-13 Score=153.08 Aligned_cols=209 Identities=19% Similarity=0.190 Sum_probs=142.9
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHH----HHHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa----~a~~~G~~vv~V~~ 709 (1058)
..++++.++++.|.+.+ +..++|+.+..++ +++ . .++++|++++..|+.... .+...|++++.++.
T Consensus 52 ~~~Le~~la~l~g~~~a-l~~~SG~~Al~~~-l~~--l------~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~ 121 (380)
T PRK06176 52 RFALEELIADLEGGVKG-FAFASGLAGIHAV-FSL--F------QSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT 121 (380)
T ss_pred HHHHHHHHHHHhCCCCE-EEECCHHHHHHHH-HHH--c------CCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC
Confidence 45788999999998775 5567787655322 221 1 256789998765543221 24568999988875
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++.. ..+..|..+|+|+++
T Consensus 122 -----~d~e~l~~ai~---~~t~lV~lesP~Nptg~~~-di~~I~~la~~~gi~vivD~t~a~--~~~~~p~~~gaDivv 190 (380)
T PRK06176 122 -----SDLSQIKKAIK---PNTKALYLETPSNPLLKIT-DLAQCASVAKDHGLLTIVDNTFAT--PYYQNPLLLGADIVV 190 (380)
T ss_pred -----CCHHHHHHhcC---cCceEEEEECCCCCCceec-CHHHHHHHHHHcCCEEEEECCccc--cccCCccccCCCEEE
Confidence 48999999986 789999999995 789887 899999999999999999988642 234567789999999
Q ss_pred eCCccccccCCCCCCCceeEEEEeC-CCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001531 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~G~i~~~~-~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1058)
+|++|+++.| |....|++.+++ ++...+. .. + +..+...+ + . -+|+...|-+.
T Consensus 191 ~S~tK~l~g~---~d~~gG~vv~~~~~~~~~~~--~~----------~-~~~G~~~~-~-------~--~~~l~~~gl~t 244 (380)
T PRK06176 191 HSGTKYLGGH---SDVVAGLVTTNNEALAQEIA--FF----------Q-NAIGGVLG-P-------Q--DSWLLQRGIKT 244 (380)
T ss_pred ecCceeccCC---ccceeeEEEecHHHHHHHHH--HH----------H-HHhcCCCC-H-------H--HHHHHHhccCc
Confidence 9999998522 112367777754 3332221 00 0 01111111 1 1 12344556666
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 001531 868 LTEASKIAILNANYMAKRLEKH 889 (1058)
Q Consensus 868 l~~~a~~~~~~a~yL~~~L~~~ 889 (1058)
+..+.++...++..+++.|++.
T Consensus 245 l~~R~~~~~~~a~~la~~L~~~ 266 (380)
T PRK06176 245 LGLRMEAHQKNALCVAEFLEKH 266 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC
Confidence 7777777888999999999875
No 455
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.50 E-value=3.9e-12 Score=149.20 Aligned_cols=302 Identities=16% Similarity=0.175 Sum_probs=178.7
Q ss_pred hcHHHHHHHHHHHHHHHhCC--CceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEE
Q 001531 628 QGYQEMFNNLGEWLCTITGF--DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1058)
Q Consensus 628 qG~~~~~~el~~~lael~G~--~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv 705 (1058)
+|..++...+.+++....+. +..++..++|++. +...+++.+. .+++.|++++..+..+...++..|++++
T Consensus 73 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~--al~~~~~~l~-----~~gd~Vli~~p~~~~~~~~~~~~g~~v~ 145 (394)
T PRK06836 73 AGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAG--ALNVALKAIL-----NPGDEVIVFAPYFVEYRFYVDNHGGKLV 145 (394)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHH--HHHHHHHHhc-----CCCCEEEEcCCCCccHHHHHHHcCCEEE
Confidence 45555454555555544333 3334444444432 2223333331 2567899998877777777788999999
Q ss_pred EEcCCCC-CCCCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc--ccHHHHHHHHHH------cCCEEEEeccCccc-cc
Q 001531 706 SVGTDAK-GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHD------NGGQVYMDGANMNA-QV 774 (1058)
Q Consensus 706 ~V~~d~~-g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~------~g~lv~vD~a~~~a-l~ 774 (1058)
.++.+++ +.+|+++|+++++ +++++|++++|+ .+|.+. +++++|+++|++ ||+++++|+++... ..
T Consensus 146 ~v~~~~~~~~~d~~~l~~~~~---~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~ 222 (394)
T PRK06836 146 VVPTDTDTFQPDLDALEAAIT---PKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYD 222 (394)
T ss_pred EEecCCccCcCCHHHHHhhcC---cCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccC
Confidence 9999876 6899999999996 789999999985 689875 258889999999 89999999986421 11
Q ss_pred CcCCC---CccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHH
Q 001531 775 GLTSP---GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1058)
Q Consensus 775 gl~~p---g~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~ 851 (1058)
+-..+ ..++-.+++.+++|.|+.| |-++|++++++.+.+... ...... ......+..+.+...+..
T Consensus 223 ~~~~~~~~~~~~~~i~~~S~SK~~~~p----GlRiG~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~~q~~ 291 (394)
T PRK06836 223 GAEVPYIFKYYDNSIVVYSFSKSLSLP----GERIGYIAVNPEMEDADD--LVAALV-----FANRILGFVNAPALMQRV 291 (394)
T ss_pred CCCCCChHHccCcEEEEecchhhccCc----ceeeEEEecCHHHhhhHH--HHHHHH-----HHhhccccccCCHHHHHH
Confidence 11111 1123357778889988544 567999999865432100 000000 000000111211111211
Q ss_pred HHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCC
Q 001531 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 931 (1058)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~G 931 (1058)
+. ..+. ++.. .+...++.+.+.+.|+++ .+.+..+.+.+ + +++.++ ..+..++.+.|.++|
T Consensus 292 ----~~---~~l~-~~~~--~~~~~~~r~~l~~~L~~~-g~~~~~~~gg~-~-~~~~~~------~~~~~~~~~~l~~~g 352 (394)
T PRK06836 292 ----VA---KCLD-ATVD--VSIYKRNRDLLYDGLTEL-GFECVKPQGAF-Y-LFPKSP------EEDDVAFCEKAKKHN 352 (394)
T ss_pred ----HH---HHhC-ChHH--HHHHHHHHHHHHHHHHhC-CCEeecCCceE-E-EEEeCC------CCCHHHHHHHHHhCC
Confidence 11 1221 1211 223335566777888764 22222222222 1 334443 136778889999999
Q ss_pred cccc-CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 932 FHGP-TMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 932 i~~~-~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
+.+. ...|..++.+||++. .++++++..++.|++++++
T Consensus 353 v~v~~g~~f~~~~~iRi~~~--~~~~~~~~~i~~l~~~l~~ 391 (394)
T PRK06836 353 LLLVPGSGFGCPGYFRLSYC--VDTETIERSLPAFEKLAKE 391 (394)
T ss_pred EEEECchhcCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 9754 333444689999997 4688888888888887654
No 456
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.50 E-value=1.8e-12 Score=150.16 Aligned_cols=312 Identities=16% Similarity=0.176 Sum_probs=181.1
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcCCc-cc--ccccCCCCCCCCChHHHHHHHHh--CCCcccccCCChhHHhhHHHHHH
Q 001531 139 MKFSKFDEGLTESQMIEHMQKLASMNK-VY--KSFIGMGYYNTHVPPVILRNIME--NPAWYTQYTPYQAEIAQGRLESL 213 (1058)
Q Consensus 139 ~~lp~~~~~~sE~e~~~~~~~la~~n~-~~--~~~lG~g~~~~~~p~~i~~~i~~--~~~~~t~ytpyq~e~sqG~l~~l 213 (1058)
.++| .++.+.+++++.++++..... .+ ..|.|.-.-+.-.++.+.+.+.. |+. .+..+.+....+.-
T Consensus 10 ~~lp--~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~~~~~~~i~~~~l~~~~n~n------~~~~~~~P~~~~~E 81 (373)
T PF00282_consen 10 EELP--EEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPGGPSPASILADLLASALNQN------GFTWEASPAATEIE 81 (373)
T ss_dssp CCHH--SSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT--CHHHHHHHHHHHHHT-B------TTSTTTSHHHHHHH
T ss_pred cccc--cCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccCCccHHHHHHHHHHhhhccc------ccccccccccccch
Confidence 4566 467789999999987644332 22 23433222111122222222211 111 11122333444555
Q ss_pred HHHHHHHHHhcCCCC-------cceEeecchHHHHHHHHHHhccc-------cC----CCCEEEEcCCCCHHHHHHHHHh
Q 001531 214 LNFQTMIADLTGLPM-------SNASLLDEGTAAAEAMAMCNNIQ-------KG----KKKTFIIASNCHPQTIDICITR 275 (1058)
Q Consensus 214 ~e~q~~ia~L~G~~~-------anasl~~~~Taa~ea~~~a~~~~-------~~----~gd~Vlv~~~~Hps~~~~~~~~ 275 (1058)
.+.-.++++|+|++. +...++.|||.++...+++.|.. ++ ++-.|++++..|.++.+.++-
T Consensus 82 ~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~- 160 (373)
T PF00282_consen 82 REVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARI- 160 (373)
T ss_dssp HHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHH-
T ss_pred HHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcce-
Confidence 667789999999993 34667788887666554443321 01 123788999999999888754
Q ss_pred hcCCCeEEEEeCch--------hhhc-c-----CCCEe-EEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEecccccc
Q 001531 276 ADGFDIKVVVSDLK--------DIDY-K-----SGDVC-GVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALT 339 (1058)
Q Consensus 276 a~~~gi~v~~v~~~--------~l~~-l-----~~~t~-~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg 339 (1058)
.|+.++.|+.+ +|++ + ...+. +|+.+.+ +.+|.++|+++|+++|++++++++|++..-+..
T Consensus 161 ---lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~~ 237 (373)
T PF00282_consen 161 ---LGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGSA 237 (373)
T ss_dssp ---TTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGGG
T ss_pred ---eeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeecccccccc
Confidence 47777777653 3544 3 12233 5666776 579999999999999999999999965222211
Q ss_pred CCCCC------CcccceEEEecC-cccccccCCCCCceEEEEEehh-hh-hcC--CCcEEeeeecCCCCcceeeeccccc
Q 001531 340 ILKPP------GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQE-YK-RMM--PGRIVGVSIDSSGKPALRVAMQTRE 408 (1058)
Q Consensus 340 ~l~~p------~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~-~~-~~l--pgrivG~s~d~~g~~~~~l~lqtre 408 (1058)
++.+. +--+||=+..+. |+++.|++ .|++.+|++ .+ +.+ ....++- .+.+....+
T Consensus 238 ~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~-----~~~~l~r~~~~l~~~~~~~~~Yl~~-~~~~~~~~~-------- 303 (373)
T PF00282_consen 238 LLSPEYRHLLFGIERADSITIDPHKWLGVPYG-----CGVLLVRDKSDLRDAFSINADYLGN-DDRESDESY-------- 303 (373)
T ss_dssp GGHCTTGGGGTTGGGESEEEEETTTTTS-SSS------EEEEESSGGGHHGGGEEEETCTT--S-SSS-GGG--------
T ss_pred cccccccccccccccccccccchhhhhcCCcc-----ceeEEeecccchHHHhccChhhhcc-ccccccccc--------
Confidence 22111 224689999999 77777864 467878764 22 222 0111110 000000000
Q ss_pred ccccccccC-CCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEec
Q 001531 409 QHIRRDKAT-SNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKC 482 (1058)
Q Consensus 409 q~irRekaT-sni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~ 482 (1058)
.-++ +--||- ...++..-+.+..+|.+|++++.++..++|++|++.|++.++++++.++.+..|.|+.
T Consensus 304 -----~~~~~tl~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~ 372 (373)
T PF00282_consen 304 -----DYGDYTLQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRY 372 (373)
T ss_dssp -----CEEEGSSSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEE
T ss_pred -----ccccccccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEe
Confidence 0011 111222 3333433444688999999999999999999999999999779999877787888764
No 457
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.49 E-value=1.2e-12 Score=153.92 Aligned_cols=300 Identities=12% Similarity=0.098 Sum_probs=172.9
Q ss_pred hhcHHHHHHHHHHHHHHHhC--CCceeee---cCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCC
Q 001531 627 AQGYQEMFNNLGEWLCTITG--FDSFSLQ---PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCG 701 (1058)
Q Consensus 627 ~qG~~~~~~el~~~lael~G--~~~~~l~---~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G 701 (1058)
.+|..++...+.+++....+ .+...+. +.+|.++...++++++.+. .++++|+++++.+..+...+++.|
T Consensus 71 ~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~-----~~Gd~Vlv~~P~y~~~~~~~~~~G 145 (404)
T PTZ00376 71 IEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFL-----PAGTTVYVSNPTWPNHVNIFKSAG 145 (404)
T ss_pred CCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhc-----CCCCEEEEcCCCchhHHHHHHHcC
Confidence 46866666555555543332 2222333 3344444434444444432 256899999987777777789999
Q ss_pred cEEEEEcCC-C-CCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--ccHHHHHHHHHHcCCEEEEeccCcc-cccC
Q 001531 702 MKIVSVGTD-A-KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG 775 (1058)
Q Consensus 702 ~~vv~V~~d-~-~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~-al~g 775 (1058)
++++.++.. + +..+|++.+++++.++.+++.++++.+| |++|.+- +++++|+++|++||++++.|.++.. ...+
T Consensus 146 ~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~ 225 (404)
T PTZ00376 146 LNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGD 225 (404)
T ss_pred CceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCC
Confidence 999999983 2 3679999999999754455677778888 5788874 3689999999999999999998631 1111
Q ss_pred c----CCCC---ccCCc-EEEeCCccccccCCCCCCCceeEEE---EeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCc
Q 001531 776 L----TSPG---YIGAD-VCHLNLHKTFCIPHGGGGPGMGPIG---VKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAA 844 (1058)
Q Consensus 776 l----~~pg---~~GaD-i~~~s~hKtf~~P~g~GGPg~G~i~---~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~s 844 (1058)
. .... ..+.. |++.++.|+|++| |.++|++. .++++...+-..+. +.......+.
T Consensus 226 ~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~----GlRvG~~~~~~~~~~~~~~l~~~~~----------~~~~~~~~~~ 291 (404)
T PTZ00376 226 LDKDAYAIRLFAERGVEFLVAQSFSKNMGLY----GERIGALHIVCANKEEAANVLSQLK----------LIIRPMYSSP 291 (404)
T ss_pred HHHHHHHHHHHHhcCCcEEEEEeCCCccccc----ccccceEEEEeCCHHHHHHHHHHHH----------HHHhhhcCCC
Confidence 0 0000 11112 5567788988755 78999984 34433221100000 0000001111
Q ss_pred cchhhHHHHHHHHHHHHHHch------hhHHHHHHHHHHHHHHHHHHHhcc-CC--eeeccCCCccceEEEEeccccccc
Q 001531 845 APWGSALILPISYTYIAMMGS------KGLTEASKIAILNANYMAKRLEKH-YP--ILFRGVNGTVAHEFIVDLRGLKNT 915 (1058)
Q Consensus 845 a~~g~~~~~~~a~a~l~~lG~------eGl~~~a~~~~~~a~yL~~~L~~~-~~--v~~~g~~~~~~~e~vv~~~~~~~~ 915 (1058)
+...+. ++..++.. +. +-+++..++..++.+.+.+.|++. +. +.+..+++.++ +++++
T Consensus 292 ~~~~q~----~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f--~~~~~------ 358 (404)
T PTZ00376 292 PIHGAR----IADRILSD-PELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIINQIGMF--SFTGL------ 358 (404)
T ss_pred chHHHH----HHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCceEE--EecCC------
Confidence 111121 11122211 11 113334445567788888888875 22 11112233221 22332
Q ss_pred CCCCHHHHHHHHHHC-CccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001531 916 AGIEPEDVAKRLMDY-GFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1058)
Q Consensus 916 ~g~~~~~v~k~L~~~-Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~ 970 (1058)
+ .+++++|.++ |+.+. | +. ||+++- .++++++.+++.|++.+.
T Consensus 359 ---~-~~~~~~L~~~~~v~v~----p--~~-Ris~~~-~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 359 ---T-KEQVERLIEKYHIYLL----D--NG-RISVAG-LTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred ---C-HHHHHHHHHhCCEeec----C--CC-eEEEec-cCHHhHHHHHHHHHHHHh
Confidence 2 4778888876 98753 1 22 888853 568899999999998754
No 458
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.49 E-value=4.5e-12 Score=149.54 Aligned_cols=291 Identities=20% Similarity=0.222 Sum_probs=177.2
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCc-cHH---HHHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGT-NPA---TAAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~-~pa---~a~~~G~~vv~V~~ 709 (1058)
..++++.++++.|.+.+ +..++|..+..++++++. .++++||++...|+. +.. .+...|++++.++.
T Consensus 59 ~~~le~~lA~l~g~~~~-v~~~sG~~Ai~~al~~l~--------~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~ 129 (418)
T TIGR01326 59 TDVLEQRIAALEGGVAA-LAVASGQAAITYAILNLA--------QAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDP 129 (418)
T ss_pred HHHHHHHHHHHhCCCeE-EEEccHHHHHHHHHHHHh--------CCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECC
Confidence 34789999999998654 566678766644444332 246788888765543 222 25678999999985
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
+ |+++++++++ +++++|++++| |.+|.+. |+++|+++||++|+++++|+++.. +.+..|.++|+|+++
T Consensus 130 ~-----d~~~l~~~l~---~~t~~V~le~p~NPtg~v~-dl~~I~~la~~~~i~livD~t~~~--~~~~~~l~~g~Divv 198 (418)
T TIGR01326 130 D-----DPEEFEKAID---ENTKAVFAETIGNPAINVP-DIEAIAEVAHAHGVPLIVDNTFAT--PYLCRPIDHGADIVV 198 (418)
T ss_pred C-----CHHHHHHhcC---cCCeEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCch--hhcCCchhcCCeEEE
Confidence 2 8999999996 78999999998 4688887 899999999999999999998642 234566678999999
Q ss_pred eCCccccccCCCCCCCceeEEEEeC-CCCCCCCCCCcccCCCC-C----------C-------C-CCCCCCCCCCccchh
Q 001531 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGI-P----------A-------P-EKSQPLGTIAAAPWG 848 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~G~i~~~~-~l~~~lpg~~vg~~~d~-g----------~-------~-~~~~~t~~i~sa~~g 848 (1058)
.+++|+|+. .|..+|.+.++. .+...........+... + . + ...+..+...+ +
T Consensus 199 ~S~sK~l~g----~G~~lGg~v~~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~G~~~~-p-- 271 (418)
T TIGR01326 199 HSATKYIGG----HGTAIGGVIVDGGKFDWANGRFPLFTTPDPSYHGLVFTETFGNPAFIVKARVQLLRDLGAALS-P-- 271 (418)
T ss_pred ECccccccC----CccceEEEEEecccccccccccccccCCCCccccchhhhhhchhhHHHHHHHHHHHhcCCCCC-H--
Confidence 999999852 244577777754 33322111000000000 0 0 0 00001111111 1
Q ss_pred hHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCC---eeeccCCCccceEEEEecccccccCCCCHHHHHH
Q 001531 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYP---ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAK 925 (1058)
Q Consensus 849 ~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~---v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k 925 (1058)
--+|+...|-+.+..+.++...++..+++.|.+... +.|+|- . .-...++++
T Consensus 272 -------~~a~~~~~~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V~yP~l---------------~---~~~~~~~~~ 326 (418)
T TIGR01326 272 -------FNAFLLLQGLETLSLRMERHVENALKVAEFLEAHPKVAWVNYPGL---------------A---SHPHHALAK 326 (418)
T ss_pred -------HHHHHHHCCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCC---------------C---CCccHHHHH
Confidence 123455556566666666667788999999987633 223221 0 012346666
Q ss_pred HHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCC
Q 001531 926 RLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPP 994 (1058)
Q Consensus 926 ~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~~~~~~~~~~~~~~~~~~p~~~ 994 (1058)
+.+..|+ .+.+-|.+. .++++..+|++.|+-+ ...-.+ | ..+.|...|.++
T Consensus 327 ~~~~~g~---------g~~~s~~l~--~~~~~~~~f~~~l~l~-~~~~sl--G----~~~sl~~~~~~~ 377 (418)
T TIGR01326 327 KYLPKGF---------GAVLSFEIK--GGREAGKKFIDALKLA-SHLANV--G----DAKSLVIHPAST 377 (418)
T ss_pred HhccCCC---------cceEEEEec--CCHHHHHHHHHhCCcc-eecccc--C----CCCceeeCCCCC
Confidence 6543332 244444442 3577788999888632 221221 3 456666655555
No 459
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.49 E-value=3.3e-12 Score=151.16 Aligned_cols=294 Identities=15% Similarity=0.210 Sum_probs=175.1
Q ss_pred HHHHHHHHHHHh-CCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEE-cCCCCCccHHHHHhCC----------
Q 001531 634 FNNLGEWLCTIT-GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCG---------- 701 (1058)
Q Consensus 634 ~~el~~~lael~-G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vli-p~saHg~~pa~a~~~G---------- 701 (1058)
..++.++|++++ +++. .+..++|++++++++.+++.|. ++++|+. ..++||.........|
T Consensus 92 ~~~la~~L~~~~~~~~~-v~~~~sGseA~e~Aik~a~~~~------g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~ 164 (426)
T PRK00062 92 EVELAELVIELVPSIEM-VRMVNSGTEATMSAIRLARGYT------GRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPD 164 (426)
T ss_pred HHHHHHHHHHhCCCCCE-EEEecCHHHHHHHHHHHHHHHh------CCCeEEEEcCccCCchhhhhhccCccccccCCCC
Confidence 347888888887 4544 4668899999888888877652 2345554 5678987543322211
Q ss_pred ---cE------EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEE-cCCCcccccc---cHHHHHHHHHHcCCEEEEecc
Q 001531 702 ---MK------IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVT-YPSTHGVYEE---GIDEICKIIHDNGGQVYMDGA 768 (1058)
Q Consensus 702 ---~~------vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt-~Pn~~G~i~~---dI~eI~~lah~~g~lv~vD~a 768 (1058)
.. +..++ ..|++++++.++++.+++++|+++ -++..|.+.+ .+++|.++|++||+++++|++
T Consensus 165 ~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv 239 (426)
T PRK00062 165 SPGVPEDFAKHTLTAP-----YNDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEV 239 (426)
T ss_pred CCCCCcccccceEEcC-----CCCHHHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeec
Confidence 10 11111 148999999997666788888887 3566787752 289999999999999999999
Q ss_pred Ccccc--cCcCCCCccC--CcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCc
Q 001531 769 NMNAQ--VGLTSPGYIG--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAA 844 (1058)
Q Consensus 769 ~~~al--~gl~~pg~~G--aDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~s 844 (1058)
+. ++ ++......+| .|+++ ++|.|+ +|..+|++++++++.+.+... + .....+.
T Consensus 240 ~~-G~r~g~~~~~~~~~~~pDi~~--~gK~l~-----~G~p~ga~~~~~~i~~~~~~~--~---------~~~~~~T--- 297 (426)
T PRK00062 240 MT-GFRVALGGAQGYYGVTPDLTT--LGKIIG-----GGLPVGAFGGRREIMEQLAPL--G---------PVYQAGT--- 297 (426)
T ss_pred hh-ccccCCccHHHHhCCCcchHh--hhhHhh-----CCCcceeeeEHHHHHHhhccC--C---------Cceeccc---
Confidence 64 22 1110011123 46543 457764 344577788888776655210 0 0000011
Q ss_pred cchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCccceEEEEecccccc----c
Q 001531 845 APWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKN----T 915 (1058)
Q Consensus 845 a~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~~~~----~ 915 (1058)
..+++..++++.+.+..+..+. ..++...+.++++++|++. +.+. ..| .|... .+.++.+.... .
T Consensus 298 -~~~~p~~~aaa~a~L~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg-~G~~~-~i~l~~~~~~~~~~~~ 371 (426)
T PRK00062 298 -LSGNPLAMAAGLATLKLLKEPG---FYEELEALTKRLAEGLKEAAKKAGIPLTVNR-VGSMF-GLFFTDEPVTNYADAK 371 (426)
T ss_pred -CcCCHHHHHHHHHHHHHHhcch---HHHHHHHHHHHHHHHHHHHHHHcCCceEEEE-ecceE-EEEEecCCCcchhhhc
Confidence 2234555666777777776553 3344556677888887643 2221 222 23322 22232111000 0
Q ss_pred CC--CCHHHHHHHHHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 916 AG--IEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 916 ~g--~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
.+ .....+.+.|.++|+.+....+ +.++++ ..+|++|||+++++|++++.++
T Consensus 372 ~~~~~~~~~i~~~l~~~Gv~v~~~~~---~~~~~~--~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 372 KSDTERFARFFHAMLDEGVYLAPSQF---EAGFVS--AAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred cccHHHHHHHHHHHHHCCeEeecCCc---Cceeee--ccCCHHHHHHHHHHHHHHHHhh
Confidence 00 0135788999999998764432 355554 5678999999999999887653
No 460
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.49 E-value=1.6e-11 Score=143.24 Aligned_cols=304 Identities=11% Similarity=0.087 Sum_probs=184.5
Q ss_pred cCCCCCCCCChHHHHHHHHh--CCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHh
Q 001531 171 IGMGYYNTHVPPVILRNIME--NPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCN 248 (1058)
Q Consensus 171 lG~g~~~~~~p~~i~~~i~~--~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~ 248 (1058)
+|.|..+...|+.+.+.+.+ +..+++.|.+. +| ..++++.+|+++|.++.++.++.|+|.+...++.++
T Consensus 33 l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~-----~g----~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~ 103 (380)
T PRK06225 33 MGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPP-----EG----FPELRELILKDLGLDDDEALITAGATESLYLVMRAF 103 (380)
T ss_pred ccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCC-----cc----hHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHh
Confidence 35555555555555434321 12234445332 22 445778999999999889999999998877766555
Q ss_pred ccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc-----------hhhhc-cCCCEeEEEEEcC-CCceeec--
Q 001531 249 NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-----------KDIDY-KSGDVCGVLVQYP-GTEGEVL-- 313 (1058)
Q Consensus 249 ~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~-----------~~l~~-l~~~t~~V~v~~p-n~~G~i~-- 313 (1058)
. ++|++|++++..|+.....+ +..|.+++.++. +++++ +++++++|++.+| |.+|.+.
T Consensus 104 ~---~~gd~vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~ 176 (380)
T PRK06225 104 L---SPGDNAVTPDPGYLIIDNFA----SRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYTE 176 (380)
T ss_pred c---CCCCEEEEcCCCCcchHHHH----HHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCCH
Confidence 2 37899999998887655443 345777776653 23444 5678999988888 6899864
Q ss_pred -cHHHHHHHHHhcCcEEEEEecccc---ccCCCCCC--cccceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCc
Q 001531 314 -DYGDFIKNAHANGVKVVMATDLLA---LTILKPPG--ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGR 386 (1058)
Q Consensus 314 -dl~~I~~~a~~~galliV~a~~~s---lg~l~~p~--~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgr 386 (1058)
++++|+++|+++|++++++. ... .+.. ... .-...+++.+. |.||.| |-..|++++++++++.+...
T Consensus 177 ~~~~~i~~~a~~~~~~ii~De-~y~~~~~~~~-~~~~~~~~~~i~~~s~SK~~g~~----G~RiG~i~~~~~l~~~~~~~ 250 (380)
T PRK06225 177 EEIKEFAEIARDNDAFLLHDC-TYRDFAREHT-LAAEYAPEHTVTSYSFSKIFGMA----GLRIGAVVATPDLIEVVKSI 250 (380)
T ss_pred HHHHHHHHHHHHCCcEEEEeh-hHHHHhccCC-chhhcCCCCEEEEeechhhcCCc----cceeEEEecCHHHHHHHHHH
Confidence 59999999999999999943 210 1100 001 11345677775 877532 33469999988877665210
Q ss_pred EEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCC
Q 001531 387 IVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGT 466 (1058)
Q Consensus 387 ivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~ 466 (1058)
. +...+++....+ ++...+.. ..+-++++.+...++..++.+.|+++.+
T Consensus 251 ~-----------------------------~~~~~~~~~~~~-~a~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 299 (380)
T PRK06225 251 V-----------------------------INDLGTNVIAQE-AAIAGLKV-KDEWIDRIRRTTFKNQKLIKEAVDEIEG 299 (380)
T ss_pred H-----------------------------hcccCCCHHHHH-HHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 0 011122221111 11111111 1122355555566677788888887522
Q ss_pred eEEc-CCCCccEEEEecC--C--HHHHHHHHHHcCceeeec-------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 467 VEVQ-GLPFFDTVKVKCA--D--AHAIASAAYKIEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 467 ~~l~-~~~~~~~v~i~~~--~--~~~l~~~L~~~GI~~~~~-------~~~~lris~~~~~t~edid~ll~al~~ 529 (1058)
+.+. .++...-+.+.++ + ..++.+.|.++||.+... ..+.+|+|+.. ++++++++++.|..
T Consensus 300 ~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~~~--~~e~l~~~~~~l~~ 372 (380)
T PRK06225 300 VFLPVYPSHGNMMVIDISEAGIDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFSI--PREQVEVFCEEFPD 372 (380)
T ss_pred CccccCCCCCeEEEEEcccccCCHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEeCC--CHHHHHHHHHHHHH
Confidence 4321 1111112333332 2 778999999999987542 23589999874 78999999999964
No 461
>PLN02271 serine hydroxymethyltransferase
Probab=99.49 E-value=2.5e-12 Score=151.25 Aligned_cols=291 Identities=12% Similarity=0.024 Sum_probs=189.5
Q ss_pred HHHHHHHhcCCCC----cceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHH-----HhhcCCCeEEEEe
Q 001531 216 FQTMIADLTGLPM----SNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICI-----TRADGFDIKVVVS 286 (1058)
Q Consensus 216 ~q~~ia~L~G~~~----anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~-----~~a~~~gi~v~~v 286 (1058)
.++...+|+|++. +|+-.+ +|+.|+.++++|+ + ++||+|+..+..|...+.... ..+...|+.+..+
T Consensus 199 a~era~~lF~~~~~~~gaNVQp~-SGs~AN~aV~~AL-l--~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~v 274 (586)
T PLN02271 199 CCERALAAFGLDSEKWGVNVQPY-SCTSANFAVYTGL-L--LPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESL 274 (586)
T ss_pred HHHHHHHHhCCcccccccceeec-cHHHHHHHHHHHh-c--CCCCEEEEecCCCCCchhcccccccccccccccceEEEE
Confidence 4577888999887 777666 7888889999888 3 389999998888866555321 1123345444443
Q ss_pred -----------Cchhhhc--cCCCEeEEEEEcCCCceeeccHHHHHHHHHhcCcEEEEEeccccccCC-----CCCCccc
Q 001531 287 -----------DLKDIDY--KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-----KPPGELG 348 (1058)
Q Consensus 287 -----------~~~~l~~--l~~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l-----~~p~~~G 348 (1058)
|++++++ +..++++|++....+. ...|+++|.++|+++|++++|++ .+..|++ ..|.. +
T Consensus 275 pY~~d~~~g~IDyd~lek~a~~~rPKLII~g~Sayp-r~~D~~~i~eIAdevGA~LmvD~-AH~aGLIa~g~~~sP~~-~ 351 (586)
T PLN02271 275 PYKVNPQTGYIDYDKLEEKALDFRPKILICGGSSYP-REWDYARFRQIADKCGAVLMCDM-AHISGLVAAKECVNPFD-Y 351 (586)
T ss_pred EcccccccCccCHHHHHHHhhhcCCeEEEECchhcc-CcCCHHHHHHHHHHcCCEEEEEC-cccccccccCcCCCCCc-C
Confidence 3455665 4678898888665444 66799999999999999999943 3455544 23433 6
Q ss_pred ceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHH
Q 001531 349 ADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALL 427 (1058)
Q Consensus 349 aDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~ 427 (1058)
|||+++++ |+|.+|. .|+++++++....+.|...+++.+.. .+.+.-.+ .+.-.-..+.|+.|. .+.
T Consensus 352 aDvvt~TTHKtLrGPr------GG~I~~r~~~~~~~~g~~gs~s~~~~-~~d~~~kI-~~aVfPglqgGphn~----~IA 419 (586)
T PLN02271 352 CDIVTSTTHKSLRGPR------GGIIFYRKGPKLRKQGMLLSHGDDNS-HYDFEEKI-NFAVFPSLQGGPHNN----HIA 419 (586)
T ss_pred CcEEEeCCcccCCCCC------ceEEEecccccccccCCccccccccc-cHHHHHHh-hcccCCccccChhHH----HHH
Confidence 99999999 8886554 46788888776656665555442210 00000000 000000223344442 355
Q ss_pred HHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcC-CCCccEEEEecCC----HHHHHHHHHHcCceeee-
Q 001531 428 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LPFFDTVKVKCAD----AHAIASAAYKIEMNLRV- 501 (1058)
Q Consensus 428 a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~-~~~~~~v~i~~~~----~~~l~~~L~~~GI~~~~- 501 (1058)
|++.++ .+......++-++++..||+.|++.|.+.| ++++. ...-+-|.+++.. ...+.+.|.+.||.+..
T Consensus 420 alAval--kea~~~efk~Ya~QVv~NAkaLA~~L~~~G-~~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn 496 (586)
T PLN02271 420 ALAIAL--KQVATPEYKAYMQQVKKNAQALASALLRRK-CRLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKT 496 (586)
T ss_pred HHHHHH--HHHhChHHHHHHHHHHHHHHHHHHHHHHCC-CeEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccc
Confidence 555554 333344558899999999999999999998 99984 2333446665532 67778888888997743
Q ss_pred --------ccCCeEEEEeccCCC----HHHHHHHHHHHh
Q 001531 502 --------VDSNTVTASFDETTT----LEDVDKLFIVFA 528 (1058)
Q Consensus 502 --------~~~~~lris~~~~~t----~edid~ll~al~ 528 (1058)
..++.|||...+.++ ++|++.+.+.+.
T Consensus 497 ~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~ 535 (586)
T PLN02271 497 AIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLL 535 (586)
T ss_pred cCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHH
Confidence 235779999887766 367776666654
No 462
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.49 E-value=3.2e-12 Score=149.21 Aligned_cols=289 Identities=15% Similarity=0.122 Sum_probs=180.5
Q ss_pred HHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc----
Q 001531 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 288 (1058)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~---- 288 (1058)
..++++.+|+++|.+. +..+.+||++...++.++.. ++||+|+++...|+++...++ ..|++++.+|+
T Consensus 31 ~~~le~~la~~~g~~~--~v~~~sgt~al~~~l~al~~--~~Gd~Viv~~~~~~~~~~~~~----~~G~~~~~~~~~~~~ 102 (380)
T TIGR03588 31 VPAFEEALAEYVGAKY--AVAFNSATSALHIACLALGV--GPGDRVWTTPITFVATANCAL----YCGAKVDFVDIDPDT 102 (380)
T ss_pred HHHHHHHHHHHHCCCe--EEEEcCHHHHHHHHHHHcCC--CCCCEEEeCCcchHHHHHHHH----HcCCEEEEEecCCCc
Confidence 3457789999999864 56678899888888777644 379999999999998887654 35888888765
Q ss_pred -----hhhhc-cC----CCEeEEEEEcCCCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCcccc----eEEEe
Q 001531 289 -----KDIDY-KS----GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGA----DIVVG 354 (1058)
Q Consensus 289 -----~~l~~-l~----~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~~Ga----Divvg 354 (1058)
+++++ ++ ++|++|++++ ++|...|+++|.++|+++|++++++ ..+++|.......+|. |+++.
T Consensus 103 ~~~d~~~l~~~i~~~~~~~t~~v~~~~--~~G~~~~~~~i~~l~~~~~~~lI~D-~a~a~g~~~~~~~~g~~~~~d~~~~ 179 (380)
T TIGR03588 103 GNIDEDALEKKLAAAKGKLPKAIVPVD--FAGKSVDMQAIAALAKKHGLKIIED-ASHALGAEYGGKPVGNCRYADATVF 179 (380)
T ss_pred CCcCHHHHHHHhhcccCCCceEEEEeC--CCCccCCHHHHHHHHHHcCCEEEEE-CCCcccCccCCEeCCCccccceEEE
Confidence 23444 66 6889888776 4799999999999999999999994 3566664322334555 99999
Q ss_pred cC---cccccccCCCCCceEEEEE-ehhhhhcCCC-cEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHH
Q 001531 355 SA---QRFGVPMGYGGPHAAFLAT-SQEYKRMMPG-RIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLAN 429 (1058)
Q Consensus 355 s~---k~lg~P~~~GGP~~G~l~~-~~~~~~~lpg-rivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~ 429 (1058)
|+ |.++.+ ..|++.+ ++++.+++.. +.-|...+.... .... ....+.+..+ +..+..+..+
T Consensus 180 S~~~~K~~~~~------~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~--~~~~~~~~~~--~g~n~~m~~l 245 (380)
T TIGR03588 180 SFHPVKIITTA------EGGAVTTNDEELAERMRLLRSHGITKDPLLF----EKQD--EGPWYYEQQE--LGFNYRMTDI 245 (380)
T ss_pred ecCCCCccccc------CceEEEECCHHHHHHHHHHHHCCCCCCcccc----cccc--cCcceeeeec--cccccCccHH
Confidence 86 455432 2345555 4555544421 111211110000 0000 0000011111 0001112222
Q ss_pred HHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCC-------CccEEEEecC--C-HHHHHHHHHHcCcee
Q 001531 430 MAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP-------FFDTVKVKCA--D-AHAIASAAYKIEMNL 499 (1058)
Q Consensus 430 ~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~-------~~~~v~i~~~--~-~~~l~~~L~~~GI~~ 499 (1058)
.|++-+..+ +.++++.++-.++++++.+.|++++++++...+ ..-.+.+... . ..++.+.|.++||.+
T Consensus 246 ~aa~g~~qL--~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~ 323 (380)
T TIGR03588 246 QAALGLSQL--KKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEFGCTRKEVFEALRAAGIGV 323 (380)
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCc
Confidence 333311111 246778888899999999999998645544221 1112333321 2 789999999999965
Q ss_pred eec--------------c-----------CCeEEEEeccCCCHHHHHHHHHHHh
Q 001531 500 RVV--------------D-----------SNTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 500 ~~~--------------~-----------~~~lris~~~~~t~edid~ll~al~ 528 (1058)
+.. . ...+.+.++...|++|++.++++|.
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~ 377 (380)
T TIGR03588 324 QVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLR 377 (380)
T ss_pred ccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHH
Confidence 311 0 1458888999999999999999886
No 463
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.49 E-value=6.4e-12 Score=148.12 Aligned_cols=355 Identities=16% Similarity=0.145 Sum_probs=197.9
Q ss_pred HHHHHHHHHHHhcCccCcCcccccccccccCCcccccccc-----ccc----ccccccCCCCchhhhhcHHHHHHHHHHH
Q 001531 570 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMP-----VTW----PSFANIHPFAPADQAQGYQEMFNNLGEW 640 (1058)
Q Consensus 570 E~e~~r~~~~l~~~~~~~~~~~i~lGs~t~~~~~~~~~~~-----~~~----~~f~~~~P~~p~e~~qG~~~~~~el~~~ 640 (1058)
-.++.+.++.+..+.. ...++.||.+.+..++...... +.. ..+..|. | .+|..++...+.++
T Consensus 17 ~~~~~~~~~~~~~~~~--~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~---~---~~G~~~LR~aia~~ 88 (409)
T PRK07590 17 FPEIARRVNAFREANP--EAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYG---P---EQGYDFLREKIAEN 88 (409)
T ss_pred HHHHHHHHHHHhhhcC--CCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCC---C---CCCCHHHHHHHHHH
Confidence 3467777887776542 2346788888776554332111 000 1222233 3 35765555555555
Q ss_pred HHHHhCC--CceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcE-----------EEEE
Q 001531 641 LCTITGF--DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK-----------IVSV 707 (1058)
Q Consensus 641 lael~G~--~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~-----------vv~V 707 (1058)
+.+..|+ +..++..++|++..+..+ .. .. .++++|+++++.+..+...+.+.|.+ ++.+
T Consensus 89 ~~~~~g~~~~~~~I~it~Ga~~al~~l--~~-~~-----~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v 160 (409)
T PRK07590 89 DYQARGCDISADEIFISDGAKCDTGNI--LD-IF-----GPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYL 160 (409)
T ss_pred HHHhcCCcCChhhEEECCCHHHHHHHH--HH-hc-----CCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEe
Confidence 5544454 445666667765322222 22 11 25678999998777777778889986 8999
Q ss_pred cCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--ccHHHHHHHHHHcCCEEEEeccCccc-ccCc-CCC-Cc
Q 001531 708 GTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVGL-TSP-GY 781 (1058)
Q Consensus 708 ~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~a-l~gl-~~p-g~ 781 (1058)
++++++...++ +. .+++++|++++| |++|.+- +.+++|+++|+++|++++.|+++..- ..+- ..+ ..
T Consensus 161 ~~~~~~~~~~d-----~~--~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~ 233 (409)
T PRK07590 161 PCTAENNFVPE-----LP--EEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYE 233 (409)
T ss_pred ecccccCCccc-----Cc--ccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhh
Confidence 98754333222 11 157888999999 5789874 36889999999999999999986421 1111 111 11
Q ss_pred c-CC-c--EEEeCCccccccCCCCCCCceeEEEEeCCCCCCCC-CCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHH
Q 001531 782 I-GA-D--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLP-SHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPIS 856 (1058)
Q Consensus 782 ~-Ga-D--i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lp-g~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a 856 (1058)
+ +. + |++.++.|+|++| |.++|++++++++++.+- +........ ..........+.+...+.. +
T Consensus 234 ~~~~~~~vi~~~SfSK~~~~p----GlRiG~~i~~~~li~~~~~~~~~~~~~~---~~~~~~~~~~~~s~~~q~a----~ 302 (409)
T PRK07590 234 IEGARECAIEFRSFSKTAGFT----GTRCAYTVVPKELKGKTSDGEGVSLNSL---WNRRQSTKFNGVSYIVQRA----A 302 (409)
T ss_pred CCCcccceEEEecCccccCCc----CceeEEEEcCHHHhhhccccchhhhHHH---HHHHHhhcccCcCHHHHHH----H
Confidence 1 11 2 4567788888654 788999999877665321 000000000 0000000000111111211 1
Q ss_pred HHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHH-HCCcccc
Q 001531 857 YTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHGP 935 (1058)
Q Consensus 857 ~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~-~~Gi~~~ 935 (1058)
...+..-+.+-+++..+....+.+++.+.|++. .+.+..+.+.. -++++++. +.+..++.+.|. ++|+.+.
T Consensus 303 ~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~~~g~~--f~wi~~~~-----~~~~~~~~~~l~~~~gv~v~ 374 (409)
T PRK07590 303 EAVYSPEGKAQIKELIDYYMENAKIIREGLESA-GFEVYGGVNAP--YIWVKTPD-----GMSSWDFFDKLLQEANVVGT 374 (409)
T ss_pred HHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCcce--EEEEECCC-----CCCHHHHHHHHHHHCCEEEe
Confidence 111111123334455555567778888888875 22222222222 25677652 356778888877 5798753
Q ss_pred -CCCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001531 936 -TMSWP--VPGTLMIEPTESESKEELDRYCDALISI 968 (1058)
Q Consensus 936 -~~~~p--~~~~Lris~te~~t~eeid~fi~aL~~i 968 (1058)
...|. ..+.+||+.. .++++++..++.|.++
T Consensus 375 pg~~f~~~~~~~iRi~~~--~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 375 PGSGFGPSGEGYFRLSAF--GSRENVLEAMERIKKA 408 (409)
T ss_pred ChhHhCCCCCCEEEEEcc--CCHHHHHHHHHHHHhh
Confidence 33342 2468999963 4678888888887654
No 464
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.48 E-value=2.1e-12 Score=150.21 Aligned_cols=252 Identities=23% Similarity=0.262 Sum_probs=163.5
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCC-ccHHH---HHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHG-TNPAT---AAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg-~~pa~---a~~~G~~vv~V~~ 709 (1058)
..++++.++++.|.+.. +..++|..+.. .++ .. . .++++|+++...|+ ++... +...|++++.++.
T Consensus 52 ~~~Le~~lA~l~g~~~~-~~~~sG~aai~-~~~---~~-l----~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 121 (377)
T PRK07671 52 RAALEELIAVLEGGHAG-FAFGSGMAAIT-AVM---ML-F----SSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDT 121 (377)
T ss_pred HHHHHHHHHHHhCCCce-EEeCCHHHHHH-HHH---HH-h----CCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECC
Confidence 55789999999998875 45666764432 222 11 1 24678999887766 33322 3457999999875
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++.. ..+..|..+|+|+++
T Consensus 122 -----~d~~~l~~ai~---~~tklV~le~P~NPtg~~~-dl~~I~~la~~~g~~lvvD~a~~~--~~~~~p~~~g~Divv 190 (377)
T PRK07671 122 -----SNLEEVEEAIR---PNTKAIYVETPTNPLLKIT-DIKKISTIAKEKGLLTIVDNTFMT--PYWQSPISLGADIVL 190 (377)
T ss_pred -----CCHHHHHHhcC---CCCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEECCCCc--cccCChhhhCCeEEE
Confidence 48999999996 789999999995 688887 899999999999999999998542 223456678999999
Q ss_pred eCCccccccCCCCCCCc---eeEEEEeC-CCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHc
Q 001531 789 LNLHKTFCIPHGGGGPG---MGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg---~G~i~~~~-~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1058)
.+++|+|+ ||+ .|++.+++ ++...+.. . + +.++...+ + . .+|+...|
T Consensus 191 ~S~sK~l~------G~~~~~~G~~v~~~~~l~~~~~~--~----------~-~~~g~~~~-~-------~--~a~l~~~~ 241 (377)
T PRK07671 191 HSATKYLG------GHSDVVAGLVVVNSPELAEDLHF--V----------Q-NSTGGILG-P-------Q--DSWLLLRG 241 (377)
T ss_pred ecCccccc------CCccceeEEEEeCcHHHHHHHHH--H----------H-HhhcCCCC-H-------H--HHHHHHcC
Confidence 99999985 442 56666654 33332210 0 0 01111111 1 1 22334445
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhccCCe---eeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCC
Q 001531 865 SKGLTEASKIAILNANYMAKRLEKHYPI---LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPV 941 (1058)
Q Consensus 865 ~eGl~~~a~~~~~~a~yL~~~L~~~~~v---~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~ 941 (1058)
-+-+..+.++..+|+..|++.|++...+ .|++ +. .....+++++.+ .| +
T Consensus 242 l~tl~~R~~~~~~na~~la~~L~~~~~v~~v~~p~---------------l~---~~~~~~~~~~~~-~g-------~-- 293 (377)
T PRK07671 242 LKTLGIRMEEHETNSRAIAEFLNNHPAVNKVYYPG---------------LP---SHPNHELAKEQA-NG-------F-- 293 (377)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCC---------------CC---CCccHHHHHhhC-CC-------C--
Confidence 5556667777889999999999875322 2221 11 123345665543 22 1
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHH
Q 001531 942 PGTLMIEPTESESKEELDRYCDALI 966 (1058)
Q Consensus 942 ~~~Lris~te~~t~eeid~fi~aL~ 966 (1058)
.+.+-|.+ .++++..+|++.|+
T Consensus 294 g~~~s~~~---~~~~~~~~f~~~l~ 315 (377)
T PRK07671 294 GGMISFDV---GSEETANKVLERLQ 315 (377)
T ss_pred CceEEEEe---CCHHHHHHHHHhCC
Confidence 24444444 35788899998886
No 465
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.48 E-value=3.2e-12 Score=148.25 Aligned_cols=284 Identities=15% Similarity=0.130 Sum_probs=170.8
Q ss_pred hcHHHHHHHHHHHHHHHhCCC---ceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEE
Q 001531 628 QGYQEMFNNLGEWLCTITGFD---SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1058)
Q Consensus 628 qG~~~~~~el~~~lael~G~~---~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~v 704 (1058)
+|..++...+.+++.+..|.+ ...+..++|++..+.. ++..+.. ++++.|+++...|..+...+.+.|+++
T Consensus 62 ~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~--~~~~l~~----~~gd~Vl~~~p~y~~~~~~~~~~g~~~ 135 (364)
T PRK07865 62 AGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAW--LPTLLGL----GPGDVVVIPELAYPTYEVGARLAGATV 135 (364)
T ss_pred cCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHH--HHHHHcC----CCCCEEEECCCCcccHHHHHHhcCCEE
Confidence 576677777777777766654 4456666776543222 2222211 256789999988877777788899998
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--ccHHHHHHHHHHcCCEEEEeccCcc-cccC-c---
Q 001531 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG-L--- 776 (1058)
Q Consensus 705 v~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~-al~g-l--- 776 (1058)
+.++. ++++. . +++++|++++| |.+|.+- +++++|.++|+++|+++++|+++.. ...+ .
T Consensus 136 ~~~~~-------~~~l~---~---~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~ 202 (364)
T PRK07865 136 VRADS-------LTELG---P---QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSI 202 (364)
T ss_pred EecCC-------hhhCC---c---ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCcc
Confidence 88752 23322 1 57788999988 4788774 2588999999999999999998642 1111 0
Q ss_pred CCC----CccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHH
Q 001531 777 TSP----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1058)
Q Consensus 777 ~~p----g~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~ 852 (1058)
..+ ++..-.|++.+++|.|+.| |.++|++.+++++...+-.. + .....+.+...+..
T Consensus 203 ~~~~~~~~~~~~~i~~~S~SK~~~~~----GlRiG~i~~~~~~~~~~~~~------------~--~~~~~~~~~~~q~~- 263 (364)
T PRK07865 203 LDPRVCGGDHTGLLAVHSLSKQSNLA----GYRAGFVAGDPALVAELLEV------------R--KHAGMMVPAPVQAA- 263 (364)
T ss_pred ccccccCCccceEEEEeechhccCCC----ceeeEEEecCHHHHHHHHHH------------H--HhcCCCcCHHHHHH-
Confidence 001 0111237788899988644 67899999887665543210 0 00111111112211
Q ss_pred HHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCc
Q 001531 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 932 (1058)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi 932 (1058)
+..++.. .+-+++..+....+.+++.+.|++. .+.+..+++.++ +++.+. .+..++.+.|.++||
T Consensus 264 ---~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~--~~~~~~-------~~~~~~~~~l~~~gv 328 (364)
T PRK07865 264 ---MVAALGD--DAHVREQRERYARRRAVLRPALEAA-GFRVDHSEAGLY--LWATRG-------EDCWDTVAWLAERGI 328 (364)
T ss_pred ---HHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCccEE--EEEeCC-------CCHHHHHHHHHHCCE
Confidence 1122211 2234444455556777888888774 222222233322 344432 356788899999999
Q ss_pred cccC-CCC-C-CCCEEEEEcCCCCCHHHHHHHHHHHH
Q 001531 933 HGPT-MSW-P-VPGTLMIEPTESESKEELDRYCDALI 966 (1058)
Q Consensus 933 ~~~~-~~~-p-~~~~Lris~te~~t~eeid~fi~aL~ 966 (1058)
.+.. ..| + .++.+||+++. +++++++.++.|+
T Consensus 329 ~v~pg~~f~~~~~~~iRi~~~~--~~~~~~~~~~~l~ 363 (364)
T PRK07865 329 LVAPGDFYGPAGAQHVRVALTA--TDERIAAAVERLA 363 (364)
T ss_pred EEeCccccCcCCCCEEEEEecC--CHHHHHHHHHHhh
Confidence 8632 223 2 35789999974 5788999888774
No 466
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.47 E-value=8.1e-13 Score=154.90 Aligned_cols=210 Identities=17% Similarity=0.170 Sum_probs=145.3
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCcc-HH---HHHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTN-PA---TAAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~-pa---~a~~~G~~vv~V~~ 709 (1058)
..++++.++++.|.+.+ +..++|..+..++++++. .++++||++...|+.. .. .+...|++++.++.
T Consensus 72 ~~~le~~lA~l~g~~~a-l~~~sG~~Ai~~~l~all--------~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~ 142 (403)
T PRK07810 72 VSMFEERLRLIEGAEAC-FATASGMSAVFTALGALL--------GAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDG 142 (403)
T ss_pred HHHHHHHHHHHhCCCcE-EEECChHHHHHHHHHHHh--------CCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECC
Confidence 45788999999998754 566678766644443331 2568899988766433 32 25568999999975
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++. .+....|.++|+|+++
T Consensus 143 -----~d~~~l~~ai~---~~tklV~~esp~Nptg~v~-dl~~I~~la~~~g~~vivD~a~a--~~~~~~~~~~gaDivv 211 (403)
T PRK07810 143 -----EDLSQWEEALS---VPTQAVFFETPSNPMQSLV-DIAAVSELAHAAGAKVVLDNVFA--TPLLQRGLPLGADVVV 211 (403)
T ss_pred -----CCHHHHHHhcC---cCceEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCC--ccccCChhhcCCcEEE
Confidence 48999999997 789999999995 789887 89999999999999999999864 2233456678999999
Q ss_pred eCCccccccCCCCCCCceeEEEEeCCCCC-CCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001531 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAP-FLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~G~i~~~~~l~~-~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1058)
.++||+|+. | |..-+|+++++++... .+. ... ...+...+ + . .+| +...|-+-
T Consensus 212 ~S~tK~l~g-~--g~~~gG~v~~~~~~~~~~l~-~~~------------~~~g~~~s-~----~---~a~--l~l~~L~t 265 (403)
T PRK07810 212 YSGTKHIDG-Q--GRVLGGAILGDREYIDGPVQ-KLM------------RHTGPALS-A----F---NAW--VLLKGLET 265 (403)
T ss_pred ccCCceecC-C--cCceeEEEEeChHHHHHHHH-HHH------------HHhCCCCC-H----H---HHH--HHHhccCc
Confidence 999999852 1 1122588888765332 110 000 00111111 1 1 122 33445556
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 001531 868 LTEASKIAILNANYMAKRLEKH 889 (1058)
Q Consensus 868 l~~~a~~~~~~a~yL~~~L~~~ 889 (1058)
+..+.++..+++.++++.|+++
T Consensus 266 l~~R~~~~~~~a~~~a~~L~~~ 287 (403)
T PRK07810 266 LALRVRHSNASALRIAEFLEGH 287 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC
Confidence 7777888889999999999876
No 467
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.47 E-value=4.9e-12 Score=146.35 Aligned_cols=277 Identities=16% Similarity=0.162 Sum_probs=168.1
Q ss_pred HHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCC--
Q 001531 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK-- 712 (1058)
Q Consensus 635 ~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~-- 712 (1058)
.++++.+++.++.+..++..+.|++. +..++++.+. .++++|+++++.+..+...+...|.+++.++++.+
T Consensus 68 ~~lr~~ia~~~~~~~~~I~it~G~~~--al~~~~~~~~-----~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~ 140 (357)
T PRK14809 68 ADLTAALADRWDVSPEQVWLANGGDG--ALDYLARAML-----DPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADD 140 (357)
T ss_pred HHHHHHHHHHhCCCcceEEECCCHHH--HHHHHHHHhc-----CCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcC
Confidence 36778888888988877777777653 3334444432 25678999987665555567788999999988643
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHc--CCEEEEeccCcccccCcCCCC-cc-CC-c-
Q 001531 713 GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQVGLTSPG-YI-GA-D- 785 (1058)
Q Consensus 713 g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~--g~lv~vD~a~~~al~gl~~pg-~~-Ga-D- 785 (1058)
..+|++++++.. +++++|++++|+ .+|.+- +.+++.++++.+ +.++++|+++.. +..-..+. .. .. .
T Consensus 141 ~~~~~~~~~~~~----~~~k~i~l~~p~NPTG~~~-s~~~~~~l~~~~~~~~~iI~De~y~~-~~~~~~~~~~~~~~~~v 214 (357)
T PRK14809 141 FEQTADTVLDAY----DGERIVYLTSPHNPTGSEI-PLDEVEALAERTDEETLVVVDEAYGE-FAERPSAVALVEERDDV 214 (357)
T ss_pred CCcCHHHHHHhh----cCCcEEEEeCCCCCCCcCC-CHHHHHHHHHhCccCcEEEEechhhh-ccCCchhHHHHhhCCCE
Confidence 467888877765 357789999994 789986 455555555432 789999998642 11100100 01 11 2
Q ss_pred EEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHch
Q 001531 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1058)
Q Consensus 786 i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1058)
+++.++.|+|+.| |.++|++.+++++...+-.. . ...+.+..++ .++. ..+..
T Consensus 215 i~~~SfSK~~~~~----GlRiG~~~~~~~~~~~~~~~--------------~--~~~~~~~~~~----~~a~---~~l~~ 267 (357)
T PRK14809 215 AVLRTFSKAYGLA----GLRLGYAVVPEEWADAYARV--------------N--TPFAASELAC----RAGL---AALDD 267 (357)
T ss_pred EEEecchhHhcCc----chhheeeecCHHHHHHHHHh--------------C--CCCCCCHHHH----HHHH---HHhCC
Confidence 4456788888644 78899999987665543110 0 0111111111 1111 22222
Q ss_pred hh-HHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccC-CCCCCCC
Q 001531 866 KG-LTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWPVPG 943 (1058)
Q Consensus 866 eG-l~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~-~~~p~~~ 943 (1058)
++ +++..+....+.+++.+.|... .++ +.+.+ +++++. +..++.+.|.++|+.+.. ..|..++
T Consensus 268 ~~~~~~~~~~~~~~r~~l~~~L~~~---~~~-~~g~f---~~~~~~--------~~~~~~~~l~~~gv~v~~g~~f~~~~ 332 (357)
T PRK14809 268 DEHVERTVETARWAREYIREELDAP---TWE-SAGNF---VLAEVG--------DASAVAEAAQERGVIVRDCTSFGLPE 332 (357)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCc---cCC-CCCCE---EEEECC--------CHHHHHHHHHHCCEEEEECccCCCCC
Confidence 33 3344444445556677777542 121 12322 345542 467899999999997643 3344468
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001531 944 TLMIEPTESESKEELDRYCDALISIR 969 (1058)
Q Consensus 944 ~Lris~te~~t~eeid~fi~aL~~i~ 969 (1058)
.+||++. +.+++++++++|++++
T Consensus 333 ~iRls~~---~~~~~~~~l~~L~~~l 355 (357)
T PRK14809 333 CIRITCG---TREETERAVEVLNEVL 355 (357)
T ss_pred eEEEecC---CHHHHHHHHHHHHHHh
Confidence 8999974 4789999999998765
No 468
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.47 E-value=2.2e-11 Score=142.04 Aligned_cols=278 Identities=15% Similarity=0.150 Sum_probs=176.6
Q ss_pred hHHHHHHHHHHHHHHHhcC--CCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 001531 207 QGRLESLLNFQTMIADLTG--LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1058)
Q Consensus 207 qG~l~~l~e~q~~ia~L~G--~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~ 284 (1058)
+|..+....+.+.+.+..| .++.++.++.|++.+...++.++. ++||+|+++...|+.+...++ ..|++++
T Consensus 61 ~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~---~~gd~vl~~~p~y~~~~~~~~----~~g~~~~ 133 (382)
T PRK06108 61 LGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALV---GPGDEVVAVTPLWPNLVAAPK----ILGARVV 133 (382)
T ss_pred CCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHhc---CCCCEEEEeCCCccchHHHHH----HCCCEEE
Confidence 3433433334445555667 566788888999887776666552 379999999999998877654 4588887
Q ss_pred EeCc-----------hhhhc-cCCCEeEEEEEcC-CCceeec---cHHHHHHHHHhcCcEEEEEeccccccCCC----CC
Q 001531 285 VSDL-----------KDIDY-KSGDVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTILK----PP 344 (1058)
Q Consensus 285 ~v~~-----------~~l~~-l~~~t~~V~v~~p-n~~G~i~---dl~~I~~~a~~~galliV~a~~~slg~l~----~p 344 (1058)
.++. +++++ +++++++|++++| |.+|.+. ++++|+++|+++|+++++| +..+..... .+
T Consensus 134 ~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~D-e~y~~~~~~~~~~~~ 212 (382)
T PRK06108 134 CVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVAD-EVYERLYYAPGGRAP 212 (382)
T ss_pred EeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEe-hhhhhhccCCCCCCC
Confidence 7654 23444 5668889999888 7899775 5788999999999999994 332211111 01
Q ss_pred ------CcccceEEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccC
Q 001531 345 ------GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKAT 417 (1058)
Q Consensus 345 ------~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaT 417 (1058)
....-.++++|. |.|+.| |-..|++++++++++.+... ...
T Consensus 213 ~~~~~~~~~~~~i~~~S~SK~~g~~----G~RiG~~~~~~~~~~~~~~~----------------------------~~~ 260 (382)
T PRK06108 213 SFLDIAEPDDRIIFVNSFSKNWAMT----GWRLGWLVAPPALGQVLEKL----------------------------IEY 260 (382)
T ss_pred CHhhcCCCcCCEEEEeechhhccCc----ccceeeeeCCHHHHHHHHHH----------------------------HHh
Confidence 011235778886 888643 33479999988777655100 000
Q ss_pred CCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC---HHHHHHHHH-
Q 001531 418 SNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAY- 493 (1058)
Q Consensus 418 sni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~---~~~l~~~L~- 493 (1058)
+..|.+.. +..++..+...+.+-++++.+++.++.+++.+.|++++|+++..+..-.-+.+.++. ..++.+.|.
T Consensus 261 ~~~~~~~~--~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~ll~ 338 (382)
T PRK06108 261 NTSCVAQF--VQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRIPGVTDSLALAKRLVD 338 (382)
T ss_pred cccCCChH--HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCCCCCHHHHHHHHHH
Confidence 01111111 122222112233445678888889999999999988733776532111112334443 678888875
Q ss_pred HcCceeeec------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001531 494 KIEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 494 ~~GI~~~~~------~~~~lris~~~~~t~edid~ll~al~ 528 (1058)
++||.+... .++.+|+|++. +.+++++.++.|.
T Consensus 339 ~~gV~v~pg~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~ 377 (382)
T PRK06108 339 EAGLGLAPGTAFGPGGEGFLRWCFAR--DPARLDEAVERLR 377 (382)
T ss_pred hCCEEEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHH
Confidence 579987442 24789999997 7899998888875
No 469
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.47 E-value=1.1e-12 Score=146.64 Aligned_cols=313 Identities=16% Similarity=0.178 Sum_probs=203.8
Q ss_pred ccccCCCCCC-CCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHH
Q 001531 168 KSFIGMGYYN-THVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAM 246 (1058)
Q Consensus 168 ~~~lG~g~~~-~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~ 246 (1058)
-||+|.+... .-.|++.. .+-..+-|.. .+..-.|+.+.+.|.++.+|+++|.+. +..|.-|-+.....+-
T Consensus 144 YNYLGFa~~~g~ca~~~~~-~~~kygl~~c-----ss~~e~G~~~~hkelE~l~A~f~g~e~--a~vF~mGf~TNs~~~p 215 (519)
T KOG1357|consen 144 YNYLGFAQSVGPCAEASLK-SFDKYGLSRC-----SSRHEAGTTEEHKELEELVARFLGVED--AIVFSMGFATNSMNIP 215 (519)
T ss_pred cccccccccCCcCChHHHH-HHHHhccccc-----ccchhcccHHHHHHHHHHHHHhcCCcc--eEEEeccccccccCcc
Confidence 3677776422 23555553 4443332222 234557999999999999999999988 6666655544333333
Q ss_pred HhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE---eCchhhhc-c-------CCCE-----e-EEEEEc-CCC
Q 001531 247 CNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV---SDLKDIDY-K-------SGDV-----C-GVLVQY-PGT 308 (1058)
Q Consensus 247 a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~---v~~~~l~~-l-------~~~t-----~-~V~v~~-pn~ 308 (1058)
++ . +|+.-|+.++.+|.|++-.++ ..|..+++ .++++|++ | .|+| + .|++.. -++
T Consensus 216 ~l-~--~~gsLIiSDelNHaSi~~GaR----LSgAtiRVfkHNdm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysm 288 (519)
T KOG1357|consen 216 SL-L--GKGSLIISDELNHASLITGAR----LSGATTRVFRHNDMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSM 288 (519)
T ss_pred ee-e--cCCcceeeccccchheecccc----ccCceEEEEecCCHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceec
Confidence 33 2 478899999999999887753 45666555 56666664 2 2333 2 334443 478
Q ss_pred ceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCCCc-----c-----cceEEEecC-cccccccCCCCCceEEEEEeh
Q 001531 309 EGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGE-----L-----GADIVVGSA-QRFGVPMGYGGPHAAFLATSQ 377 (1058)
Q Consensus 309 ~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p~~-----~-----GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~ 377 (1058)
.|.|.+++++.++.|++.++++++ +.++.|.+.+-|. | .+||.+|+. |+||. + .|+++.++
T Consensus 289 Eg~iv~Lp~vvalkkkykayl~lD-EAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga----~---GGyiagsk 360 (519)
T KOG1357|consen 289 EGTIVDLPEVVALKKKYKAYLYLD-EAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGA----A---GGYIAGSK 360 (519)
T ss_pred cCeecccHHHHHhhccccEEEEee-ccccccccCCCCcceeeccCCCchhheeecceehhhccc----c---cceecCcH
Confidence 999999999999999999999994 5677776644321 3 379999998 77753 2 37999999
Q ss_pred hhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhC---cccHHHHHHHHHHHH
Q 001531 378 EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHG---PEGLKTIAQRVHGLA 454 (1058)
Q Consensus 378 ~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g---~~Gl~~ia~~~~~~a 454 (1058)
++++.+-- .. + ..++ +|+ +. .++....-..--...| ..+.++..+++.+++
T Consensus 361 ~lid~lrt-------~s-~-~~~y--------------at~-~s--ppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns 414 (519)
T KOG1357|consen 361 ELIDYLRT-------PS-P-SALY--------------ATS-LS--PPVAQQILTSVKHIMGEDGTNRGRQKIERLAENS 414 (519)
T ss_pred HHHhhhcc-------CC-C-ceee--------------ccc-CC--hHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhh
Confidence 98876610 00 0 0010 110 00 1111111111122344 445678888999999
Q ss_pred HHHHHHHhcCCCeEEcCC--CCccEEEEecCC-HHHHHHHHHHcCceeee-------ccCCeEEEEeccCCCHHHHHHHH
Q 001531 455 GTFALGLKKLGTVEVQGL--PFFDTVKVKCAD-AHAIASAAYKIEMNLRV-------VDSNTVTASFDETTTLEDVDKLF 524 (1058)
Q Consensus 455 ~~l~~~L~~~G~~~l~~~--~~~~~v~i~~~~-~~~l~~~L~~~GI~~~~-------~~~~~lris~~~~~t~edid~ll 524 (1058)
+|++..|.+.| |.+++. +...++.+..+. ...+.+.|.+++|-+-. +-.+++|+|.+..||.|++|+++
T Consensus 415 ~yfr~~l~~~g-fivyG~~dSpVvplll~~~~k~~~f~r~~l~~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l 493 (519)
T KOG1357|consen 415 RYFRWELQKMG-FIVYGNNDSPVVPLLLYGPAKIVAFSREMLERNIGVVVVGFPATPLLESRARFCLSASHTKEDLDRAL 493 (519)
T ss_pred HHHHHhhhcCc-EEEecCCCCCcceeeecCcccccHHHHHHHhcCceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHH
Confidence 99999999988 888853 333356665555 56778888888775421 12367899999999999999999
Q ss_pred HHHhCC
Q 001531 525 IVFAGG 530 (1058)
Q Consensus 525 ~al~~~ 530 (1058)
+.....
T Consensus 494 ~~i~~~ 499 (519)
T KOG1357|consen 494 EVIDRV 499 (519)
T ss_pred HHHhhh
Confidence 998653
No 470
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.47 E-value=1.1e-11 Score=145.60 Aligned_cols=276 Identities=18% Similarity=0.186 Sum_probs=173.1
Q ss_pred HHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccc----cC---CCCEEE-EcCCCCHHHHHHHHHh-------
Q 001531 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ----KG---KKKTFI-IASNCHPQTIDICITR------- 275 (1058)
Q Consensus 211 ~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~----~~---~gd~Vl-v~~~~Hps~~~~~~~~------- 275 (1058)
+...++++.+++++|.+ .+.++++||.|+|+++.+.+.. ++ .+++|+ .+...|.++...+..-
T Consensus 83 ~~~~~l~~~l~~~~~~~--~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~ 160 (401)
T PRK00854 83 DQLAPLYEELAALTGSH--KVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARG 160 (401)
T ss_pred HHHHHHHHHHHhhCCCC--EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccc
Confidence 35567888999999875 4888899999999887655321 01 235555 5556787766544210
Q ss_pred -hcCCCeEEEEe---Cchhhhc-cCCCEeEEEEEcC-CCceeecc----HHHHHHHHHhcCcEEEEEecccc-ccCCCC-
Q 001531 276 -ADGFDIKVVVS---DLKDIDY-KSGDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVKVVMATDLLA-LTILKP- 343 (1058)
Q Consensus 276 -a~~~gi~v~~v---~~~~l~~-l~~~t~~V~v~~p-n~~G~i~d----l~~I~~~a~~~galliV~a~~~s-lg~l~~- 343 (1058)
.......+..+ |++++++ +.+++++|++..| |.+|.+.| +++|.++|+++|+++++| +..+ +|....
T Consensus 161 ~~~~~~~~~~~~~~~d~~~le~~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~D-Ev~~g~g~~g~~ 239 (401)
T PRK00854 161 GFGPFTPGFRVVPFGDAEALEAAITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILD-EIQTGLGRTGKL 239 (401)
T ss_pred cCCCCCCCeEEeCCCCHHHHHHHhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe-chhhCCCCCchH
Confidence 01112233343 4567777 7788999999887 68999886 999999999999999994 3443 432210
Q ss_pred ----CCcccceEEEecCcccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCC
Q 001531 344 ----PGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSN 419 (1058)
Q Consensus 344 ----p~~~GaDivvgs~k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsn 419 (1058)
......|+++. +|+|++ |.-.+|++.+++++.+.+... .. + +.
T Consensus 240 ~~~~~~g~~~D~~~~-~K~l~g----g~~~ig~v~~~~~~~~~l~~~----------~~-----------------~-~t 286 (401)
T PRK00854 240 LAEEHEGIEADVTLI-GKALSG----GFYPVSAVLSNSEVLGVLKPG----------QH-----------------G-ST 286 (401)
T ss_pred hHHhhcCCCCCEEEe-cccccC----CccCeEEEEEcHHHHhcccCC----------CC-----------------C-CC
Confidence 01134688876 488853 221257788888776655210 00 0 11
Q ss_pred ccchhH-HHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEc----CCCCccEEEEecCC--HHHHHHHH
Q 001531 420 ICTAQA-LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ----GLPFFDTVKVKCAD--AHAIASAA 492 (1058)
Q Consensus 420 i~t~~~-l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~----~~~~~~~v~i~~~~--~~~l~~~L 492 (1058)
+|.+.. ..+..+++ ..+..++ +.++..++.+++.+.|++++ .... +...+-.+.+..+. ..++.+.|
T Consensus 287 ~~~~~~~~aa~~a~L--~~l~~~~---~~~~~~~~~~~l~~~L~~~~-~~~~~~~~g~g~~~~i~~~~~~~~~~~~~~~L 360 (401)
T PRK00854 287 FGGNPLACAVARAAL--KVLTEEG---MIENAAEMGAYFLEGLRSIR-SNIVREVRGRGLMLAVELEPEAGGARQYCEAL 360 (401)
T ss_pred CCcCHHHHHHHHHHH--HHHHHcC---HHHHHHHHHHHHHHHHHhhc-cCceEEEeccceEEEEEEecCchhHHHHHHHH
Confidence 121111 22222222 3332233 45677788899999998875 3322 11111123232222 67899999
Q ss_pred HHcCceeeeccCCeEEEEeccCCCHHHHHHHHHHHh
Q 001531 493 YKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 493 ~~~GI~~~~~~~~~lris~~~~~t~edid~ll~al~ 528 (1058)
.++||.+.....+.+|++++..++++||+++++.|.
T Consensus 361 ~~~GV~v~~~~~~~lR~~p~~~~t~e~i~~~i~~l~ 396 (401)
T PRK00854 361 KERGLLAKDTHDHTIRLAPPLVITREQVDWALEQIA 396 (401)
T ss_pred HHCCeEEecCCCCEEEEeCCcccCHHHHHHHHHHHH
Confidence 999999876556799999999999999999999985
No 471
>PRK07505 hypothetical protein; Provisional
Probab=99.47 E-value=2e-11 Score=143.62 Aligned_cols=275 Identities=16% Similarity=0.163 Sum_probs=162.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHH-Hhc-c-ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 001531 209 RLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAM-CNN-I-QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (1058)
Q Consensus 209 ~l~~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~-a~~-~-~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~ 285 (1058)
..+.+.++++.+++++|. .+.++.+|+.+.++++. +.. . .+++++.|+.+...|+++...... .+ .+.+++.
T Consensus 89 ~~~~~~~l~~~la~~~~~---~~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~-~~-~~~~v~~ 163 (402)
T PRK07505 89 RSQILKDLEEALSELFGA---SVLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGI-CA-DETEVET 163 (402)
T ss_pred hhHHHHHHHHHHHHHhCC---CEEEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhh-hh-cCCeEEE
Confidence 355778899999999997 35667778877776553 221 1 112334556677999986432211 11 2456666
Q ss_pred eCc---hhhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCCC------Ccccc---e-
Q 001531 286 SDL---KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP------GELGA---D- 350 (1058)
Q Consensus 286 v~~---~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~p------~~~Ga---D- 350 (1058)
++. +++++ ++++++++++.+| |.+|.+.|+++|.++|+++|+++++| +.++++.+.+. ..+|. |
T Consensus 164 ~~~~d~~~l~~~~~~~~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~D-Ea~~~~~~g~~g~~~~~~~~~~~~~d~ 242 (402)
T PRK07505 164 IDHNDLDALEDICKTNKTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYID-DAHGLSIYGKNGEGYVRSELDYRLNER 242 (402)
T ss_pred eCCCCHHHHHHHHhcCCCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEE-CcccccCcCCCCCchHHHHcCCCCCCC
Confidence 654 55655 6666778888887 67899999999999999999999994 45544332211 12332 4
Q ss_pred -EEEecC-cccccccCCCCCceEEEEE-ehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHH
Q 001531 351 -IVVGSA-QRFGVPMGYGGPHAAFLAT-SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALL 427 (1058)
Q Consensus 351 -ivvgs~-k~lg~P~~~GGP~~G~l~~-~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~ 427 (1058)
+++.+. |.|+++ | |++.+ ++++.+.+... ...+.. . .|+.+ .+..
T Consensus 243 ~i~~~s~sK~~~~~----G---g~~~~~~~~~~~~~~~~----------~~~~t~------------~--~~~~~-~a~a 290 (402)
T PRK07505 243 TIIAASLGKAFGAS----G---GVIMLGDAEQIELILRY----------AGPLAF------------S--QSLNV-AALG 290 (402)
T ss_pred eEEEEechhhhhcc----C---eEEEeCCHHHHHHHHHh----------CCCcee------------C--CCCCH-HHHH
Confidence 555565 887632 2 56654 45555544100 000000 0 11111 1222
Q ss_pred HHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC---HHHHHHHHHHcCceeeecc-
Q 001531 428 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVVD- 503 (1058)
Q Consensus 428 a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~---~~~l~~~L~~~GI~~~~~~- 503 (1058)
+..+++ ..+..+.+.++.+++.++..++.+.+... ....++....+..+. +.++.++|.++||.++...
T Consensus 291 a~~a~l--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~ 363 (402)
T PRK07505 291 AILASA--EIHLSEELDQLQQKLQNNIALFDSLIPTE-----QSGSFLPIRLIYIGDEDTAIKAAKQLLDRGFYTSPVFF 363 (402)
T ss_pred HHHHHH--HHHhccCcHHHHHHHHHHHHHHHHHHHhc-----CCCCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEeeecC
Confidence 222222 34556666666666666555544433211 011222212222222 6789999999999986531
Q ss_pred ------CCeEEEEeccCCCHHHHHHHHHHHh
Q 001531 504 ------SNTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 504 ------~~~lris~~~~~t~edid~ll~al~ 528 (1058)
.+.||+++...+|++|+++++++|.
T Consensus 364 p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~ 394 (402)
T PRK07505 364 PVVAKGRAGLRIMFRASHTNDEIKRLCSLLK 394 (402)
T ss_pred CCCCCCCceEEEecCccCCHHHHHHHHHHHH
Confidence 2589999999999999999999985
No 472
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.47 E-value=8.1e-12 Score=145.21 Aligned_cols=217 Identities=18% Similarity=0.126 Sum_probs=150.9
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHH----HHHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa----~a~~~G~~vv~V~~ 709 (1058)
...+++.++.+-|.+.. +...+|..|..++++++. +++++||++++.++.+.. .+...|+++..++.
T Consensus 66 ~~~Le~~la~le~~~~~-v~~sSG~aAi~~~l~all--------~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~ 136 (395)
T PRK05967 66 TDALCKAIDALEGSAGT-ILVPSGLAAVTVPFLGFL--------SPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDP 136 (395)
T ss_pred HHHHHHHHHHHhCCCCE-EEECcHHHHHHHHHHHhc--------CCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCC
Confidence 45678889988876654 455567665544443331 357899999887766543 24678999999865
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
+ +.++++++++ ++|++|++++| |+++.+. ||++|+++||++|++++||++.. -..+.+|.++|+||++
T Consensus 137 ~-----~~e~l~~al~---~~TklV~lesPsNP~l~v~-dl~~I~~la~~~g~~vvVD~t~a--~p~~~~pl~~GaDivv 205 (395)
T PRK05967 137 E-----IGAGIAKLMR---PNTKVVHTEAPGSNTFEMQ-DIPAIAEAAHRHGAIVMMDNTWA--TPLYFRPLDFGVDISI 205 (395)
T ss_pred C-----CHHHHHHhcC---cCceEEEEECCCCCCCcHH-HHHHHHHHHHHhCCEEEEECCcc--CceecChhHcCCCEEE
Confidence 2 4578999996 78999999998 4677777 89999999999999999998753 2345789999999999
Q ss_pred eCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhH
Q 001531 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl 868 (1058)
.++.|+++ |.|.--+|+++.++++...+- .. + +.++..- +++ -+|+...|-+-+
T Consensus 206 ~S~tKy~~---Gh~d~~~G~v~~~~~~~~~l~-~~-----------~-~~~G~~~-~p~---------da~l~~rgl~Tl 259 (395)
T PRK05967 206 HAATKYPS---GHSDILLGTVSANEKCWPQLL-EA-----------H-GTLGLCA-GPD---------DTYQILRGLRTM 259 (395)
T ss_pred EecccccC---CCCCeeEEEEEcCHHHHHHHH-HH-----------H-HHcCCCC-CHH---------HHHHHHcCcccH
Confidence 99999863 223334677766654322220 00 0 0111111 111 245667777778
Q ss_pred HHHHHHHHHHHHHHHHHHhccC---Ceeecc
Q 001531 869 TEASKIAILNANYMAKRLEKHY---PILFRG 896 (1058)
Q Consensus 869 ~~~a~~~~~~a~yL~~~L~~~~---~v~~~g 896 (1058)
.-+.++..+||..+++.|+++. .|.|+|
T Consensus 260 ~lR~~~~~~na~~lA~~L~~hp~v~~V~yPg 290 (395)
T PRK05967 260 GIRLEHHRKSALEIARWLEGRPDVARVLHPA 290 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcEEECCC
Confidence 8788899999999999999862 455665
No 473
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.46 E-value=9.3e-12 Score=143.04 Aligned_cols=273 Identities=15% Similarity=0.116 Sum_probs=167.0
Q ss_pred HHHHHHHHHHhCCCc-eeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCC
Q 001531 635 NNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1058)
Q Consensus 635 ~el~~~lael~G~~~-~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g 713 (1058)
.++++.+++.+|.+. .++..++|++..+. +..+.+ .+++ |+++.+.+..+...+++.|.+++.++.+.
T Consensus 56 ~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~--~l~~~~------~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~-- 124 (339)
T PRK06959 56 DGLAACAARYYGAPDAAHVLPVAGSQAAIR--ALPALL------PRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA-- 124 (339)
T ss_pred HHHHHHHHHHhCCCCcccEEECcCHHHHHH--HHHHhc------CCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc--
Confidence 478899999999974 56666677653222 222221 1344 78877755555566889999999998753
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCcc-CCc--EE
Q 001531 714 NINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI-GAD--VC 787 (1058)
Q Consensus 714 ~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~-GaD--i~ 787 (1058)
+. +. +.+..+++++|| .+|.+- +.+++|++.+.+++.++++|+++.- +........+ ..+ |+
T Consensus 125 ----~~----~~---~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~-~~~~~s~~~~~~~~~vi~ 192 (339)
T PRK06959 125 ----DT----LP---AALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFAD-TLPAASLAAHTDRPGLVV 192 (339)
T ss_pred ----hh----cc---ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCcc-CCCcccchhccCCCCEEE
Confidence 22 22 345678999995 789885 2456666667788999999998642 1110000111 122 55
Q ss_pred EeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001531 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1058)
Q Consensus 788 ~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1058)
..++.|.|++ .|.++|++++++++.+.+-.. +...++++ ..+ .++.+++. ..+-
T Consensus 193 l~SfSK~~gl----~GlRiGy~v~~~~li~~l~~~--------------~~~~~vs~--~~q----~a~~~~L~--~~~~ 246 (339)
T PRK06959 193 LRSVGKFFGL----AGVRAGFVLAAPALLAALRDA--------------LGAWTVSG--PAR----HAVRAAFA--DAAW 246 (339)
T ss_pred EecChhhcCC----cchheEEEecCHHHHHHHHHh--------------cCCCCCcH--HHH----HHHHHHhC--cHHH
Confidence 5667777754 478999999987766544210 00011221 112 12222222 1122
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEE
Q 001531 868 LTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLM 946 (1058)
Q Consensus 868 l~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lr 946 (1058)
.++..+....+.+++.+.|++. +.+. . +.. -++++++ +..++.+.|.++||.+.. |+..+++|
T Consensus 247 ~~~~~~~~~~~r~~l~~~L~~~g~~~~-~---~~~--f~~~~~~--------~~~~l~~~l~~~GI~vr~--~~~~~~lR 310 (339)
T PRK06959 247 QAAMRERLAADGARLAALLRAHGFAVH-A---TPL--FSWTDDP--------RAAALHAALARRGIWTRY--FAPPPSVR 310 (339)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCcc-C---cce--EEEEeCC--------CHHHHHHHHHhCCeEEEE--CCCCCeEE
Confidence 3344455666788899999875 4332 1 111 1345542 467899999999999863 33357899
Q ss_pred EEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001531 947 IEPTESESKEELDRYCDALISIREEIAQ 974 (1058)
Q Consensus 947 is~te~~t~eeid~fi~aL~~i~~e~~~ 974 (1058)
|+++ .+.+|+++|+++|+++.+.+..
T Consensus 311 isi~--~~~~e~~~l~~al~~~~~~~~~ 336 (339)
T PRK06959 311 FGLP--ADEAEWQRLEDALAECVPTLAA 336 (339)
T ss_pred EECC--CCHHHHHHHHHHHHHHHHHHhh
Confidence 9974 3568999999999988777654
No 474
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.46 E-value=2.3e-12 Score=142.09 Aligned_cols=322 Identities=19% Similarity=0.258 Sum_probs=199.5
Q ss_pred ccccccccCCccccccccc-cccccccc-CCCCchhhhhcHHHHHHHHHHHHHHHhCCC-ceeeecCchHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPV-TWPSFANI-HPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVI 668 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~-~~~~f~~~-~P~~p~e~~qG~~~~~~el~~~lael~G~~-~~~l~~~sGa~ge~a~llai 668 (1058)
..+|+|++++++++..+.. -|--|..| || | +.++.+.|.+++--+ .+.++.|||+++++.+++++
T Consensus 62 vslGHchP~v~~a~~kQl~~l~H~t~~~~~~--p----------i~~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~ma 129 (442)
T KOG1404|consen 62 VSLGHCHPDVVAAAVKQLKKLYHTTSGYLNP--P----------IHDLAEALVSKLPGDLKVVFFVNSGSEANELALKMA 129 (442)
T ss_pred EEcCCCChHHHHHHHHhhhhhEEeeccccCC--c----------HHHHHHHHHHhCCCCceEEEEecCCchHHHHHHHHH
Confidence 3689999999999888741 11112222 22 2 567788887776544 34688999999999999999
Q ss_pred HHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcC-------------CCC-----CC-----C--CHHHHHHH
Q 001531 669 RAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGT-------------DAK-----GN-----I--NIEELRKA 723 (1058)
Q Consensus 669 r~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~-------------d~~-----g~-----i--D~e~L~~~ 723 (1058)
|.|.. .-+.|-...++||.-+.++.+.|.....-++ |.. |. . -.++++..
T Consensus 130 r~Yt~-----~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~ 204 (442)
T KOG1404|consen 130 RLYTG-----NLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDL 204 (442)
T ss_pred HHhcC-----CceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHH
Confidence 98842 2355556789999888876554443222111 110 11 0 02445555
Q ss_pred HHhcCCCeEEEEEEcC--CCcccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCCc-cC-------CcEEEeC
Q 001531 724 AEANRDNLSTLMVTYP--STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY-IG-------ADVCHLN 790 (1058)
Q Consensus 724 i~~~~~~taaV~vt~P--n~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~-~G-------aDi~~~s 790 (1058)
+....+.+.+-++..| ...|+++. .+++..++|+++|+++|.|++ +.|+.|.|. || +||+++
T Consensus 205 i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEV----qtGfGRtG~~wgfe~h~v~PDIvTm- 279 (442)
T KOG1404|consen 205 ILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEV----QTGFGRTGHMWGFESHGVVPDIVTM- 279 (442)
T ss_pred HHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhh----hhccccccccccccccCCCccHHHH-
Confidence 5433444455555444 45688873 489999999999999999998 667888874 34 466654
Q ss_pred CccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHH
Q 001531 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1058)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1058)
.|.+ |.| -.+|.+.+.++++.-+..+.. ..++ +.|++..++++.+.+..+-++.+.+
T Consensus 280 -AKgi----GnG-~Pl~AVvtt~EIa~v~~~~~~--------------~fnT---yggnP~a~avg~aVL~Vikee~LqE 336 (442)
T KOG1404|consen 280 -AKGI----GNG-FPLGAVVTTPEIADVLNQKSS--------------HFNT---YGGNPVACAVGLAVLKVIKEENLQE 336 (442)
T ss_pred -Hhhc----cCC-CcceeeecCHHHHHHHHhccc--------------cccc---cCCCchhHHHHHHHHHHHHHHhHHH
Confidence 4665 344 456777777776654321110 0111 2345666677788888888776665
Q ss_pred HHHHHHHHHHHHHHHHhcc---CCee--eccCCCccc-eEEEEecc--cccccCCCCHHHHHHHHHHCCccccCCCCCCC
Q 001531 871 ASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVA-HEFIVDLR--GLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVP 942 (1058)
Q Consensus 871 ~a~~~~~~a~yL~~~L~~~---~~v~--~~g~~~~~~-~e~vv~~~--~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~ 942 (1058)
.+ .+...||.++|.+. ++++ .+|. |-.. -|+ ++.+ .+.- .......+.+.+.+.|+.++.-... .
T Consensus 337 ~a---a~vG~yl~~~l~~l~d~h~iIGdVRG~-GLm~GvE~-V~dk~~~~pp-~~~~~~~i~~~cke~Gvlvg~g~i~-G 409 (442)
T KOG1404|consen 337 NA---AEVGSYLLEKLAALKDKHPIIGDVRGR-GLMLGVEL-VSDKSEPKPP-ATAEGAVIGEQCKELGVLVGKGGIH-G 409 (442)
T ss_pred HH---HHHHHHHHHHHHHHhhcCCceeecccc-eeEEEEEE-ecccCCCCCc-chHHHHHHHHHHHHhCeeeeccccc-c
Confidence 44 46678999999765 4443 1221 2211 133 2222 1100 0112456888899999998643321 4
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHH
Q 001531 943 GTLMIEPTESESKEELDRYCDAL 965 (1058)
Q Consensus 943 ~~Lris~te~~t~eeid~fi~aL 965 (1058)
+.+||.|+...|++|+|..++..
T Consensus 410 ~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 410 NVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred eEEEecCCeeccHHHHHHHHHHH
Confidence 68999999999999997666655
No 475
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.46 E-value=2.1e-11 Score=144.44 Aligned_cols=328 Identities=16% Similarity=0.202 Sum_probs=190.0
Q ss_pred ccccccccCCcccccccccccccccccCCCCchhhhhcHHHHHHHHHHHHHHHhCCC--ceeeecCchHHHHHHHHHHHH
Q 001531 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIR 669 (1058)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~~~~~el~~~lael~G~~--~~~l~~~sGa~ge~a~llair 669 (1058)
..+|+|.+++..++..+. ....+..+..+ +. ....++.++++++.+.+ ...++.++|+++.++++..+|
T Consensus 53 ~~lGh~~~~i~~a~~~~~-~~~~~~~~~~~-------~~-~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar 123 (425)
T PRK08088 53 LNTGHLHPKVVAAVEAQL-KKLSHTCFQVL-------AY-EPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIAR 123 (425)
T ss_pred cCCCCCCHHHHHHHHHHH-hhCCCcccccc-------CC-HHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHH
Confidence 457888777666555542 22111111111 01 12337888899988753 245778899998888888887
Q ss_pred HHHHHcCCCCCCEEEEcCCCCCccHHHHHhCC---------------cEEEEEcCCCCCCCC----HHHHHHHHH--hcC
Q 001531 670 AYHKARGDHHRNVCIIPVSAHGTNPATAAMCG---------------MKIVSVGTDAKGNIN----IEELRKAAE--ANR 728 (1058)
Q Consensus 670 ~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G---------------~~vv~V~~d~~g~iD----~e~L~~~i~--~~~ 728 (1058)
.|. ++++.|.+..++||....+....+ +..+.+|.+.++ .+ +++|+++++ .+.
T Consensus 124 ~~~-----~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~l~~~l~~~~~~ 197 (425)
T PRK08088 124 AAT-----KRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHG-VSEDDAIASIERIFKNDAAP 197 (425)
T ss_pred HHh-----CCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccC-ccHHHHHHHHHHHHHhccCC
Confidence 763 133455667889998765533211 111112322222 22 566888886 234
Q ss_pred CCeEEEEEEcC-CCccccc---ccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCc------cC--CcEEEeCCccccc
Q 001531 729 DNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY------IG--ADVCHLNLHKTFC 796 (1058)
Q Consensus 729 ~~taaV~vt~P-n~~G~i~---~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~------~G--aDi~~~s~hKtf~ 796 (1058)
+++++|+++.. +..|.+. ..+++|.++|+++|++++.|+++. ++.++|. .| .|+. ++.|+++
T Consensus 198 ~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~----g~g~~g~~~~~~~~~~~pdi~--s~sK~l~ 271 (425)
T PRK08088 198 EDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQT----GAGRTGTLFAMEQMGVAADLT--TFAKSIA 271 (425)
T ss_pred CceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc----CCCcCcchhHHhhcCCCCCEE--EEecccc
Confidence 67777776643 2335443 248999999999999999999854 3333332 23 4554 4468874
Q ss_pred cCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHH
Q 001531 797 IPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI 876 (1058)
Q Consensus 797 ~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~ 876 (1058)
+|-.+|++++++++.+.+.... .....+ ++...++++.+++..+..+.+.+..+
T Consensus 272 -----~G~rig~v~~~~~~~~~~~~~~--------------~~~t~~----~~~~~~~a~~~~l~~~~~~~~~~~~~--- 325 (425)
T PRK08088 272 -----GGFPLAGVTGRAEVMDAIAPGG--------------LGGTYA----GNPIACAAALAVLKVFEQENLLQKAN--- 325 (425)
T ss_pred -----CCCcceeeEecHHHHhhcCCCC--------------CCCCCC----cCHHHHHHHHHHHHHHHhcCHHHHHH---
Confidence 4567999999877766542110 001111 23444555666666665444433333
Q ss_pred HHHHHHHHHHhcc---CCee--eccCCCccceEEEEeccc-cc--ccCCCCHHHHHHHHHHCCcccc-CCCCCCCCEEEE
Q 001531 877 LNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRG-LK--NTAGIEPEDVAKRLMDYGFHGP-TMSWPVPGTLMI 947 (1058)
Q Consensus 877 ~~a~yL~~~L~~~---~~v~--~~g~~~~~~~e~vv~~~~-~~--~~~g~~~~~v~k~L~~~Gi~~~-~~~~p~~~~Lri 947 (1058)
...+++.+.|.++ ++.. ..|. |.+ +.+.+.. .. ........++.+.+.++|+.+. ...+ ++.+|+
T Consensus 326 ~~~~~~~~~l~~l~~~~~~~~~v~g~-G~~---~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~--~~~iRl 399 (425)
T PRK08088 326 ALGEKLKDGLLAIAEKHPEIGDVRGL-GAM---IAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCGPY--YNVLRI 399 (425)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEecc-ceE---EEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCCCC--CCEEEE
Confidence 3345555555442 3321 2232 322 3444311 00 0001235788899999997653 2223 488999
Q ss_pred EcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 948 EPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 948 s~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
+|+...|++||++.++.|.++++++
T Consensus 400 ~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 400 LVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred ECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999988654
No 476
>PRK06460 hypothetical protein; Provisional
Probab=99.46 E-value=4.7e-12 Score=147.35 Aligned_cols=257 Identities=18% Similarity=0.186 Sum_probs=163.6
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCC-ccH---HHHHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHG-TNP---ATAAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg-~~p---a~a~~~G~~vv~V~~ 709 (1058)
..++++.++++.|.+.+ +..++|.++..++ ++.+. +++++|+++.+.++ ++. ..+...|++++.++.
T Consensus 47 ~~~L~~~lA~l~g~~~~-v~~~sG~~ai~~~---l~al~-----~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~ 117 (376)
T PRK06460 47 VLELTKKIVELENAEMG-VAFSSGMGAISTT---ALALL-----KPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNP 117 (376)
T ss_pred HHHHHHHHHHHhCCCcE-EEeCCHHHHHHHH---HHHHh-----CCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECC
Confidence 45788999999999765 4446676544333 33321 25678999876543 333 336678999998876
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
+ |.+.+++.++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|+++... ....|.++|+|+++
T Consensus 118 ~-----~~~~l~~~~~---~~tklV~l~sp~NPtG~v~-d~~~I~~la~~~g~~vivDea~~~~--~~~~~l~~~~divv 186 (376)
T PRK06460 118 G-----SDNIIEKAKS---KRYDVVFVENITNPLLRVV-DITELSKVCKENGSILIVDATFSTP--INQKPLELGADIVV 186 (376)
T ss_pred C-----CHHHHHHhcC---CCceEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEECCcCcc--ccCChhhcCCCEEE
Confidence 4 2344555444 789999999994 789887 7999999999999999999986422 12344457899999
Q ss_pred eCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhH
Q 001531 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl 868 (1058)
.++||+|+ |.|+..+|+++.++++.+.+... + .. .+++.+ + . .+|+...|.+-+
T Consensus 187 ~S~sK~l~---G~~~~~~G~~~~~~~l~~~l~~~------------~-~~-~g~~~~----~---~--~a~~~l~~~~~l 240 (376)
T PRK06460 187 HSASKFLA---GHNDVIAGLAAGYGKLLNVIDQM------------R-RT-LGTSLD----P---H--AAYLTLRGIKTL 240 (376)
T ss_pred eecceecc---CCCCceEEEEecCHHHHHHHHHH------------H-Hh-cCCCCC----H---H--HHHHHHhchhhH
Confidence 99999985 22334588888876655433100 0 00 011111 1 1 223334455667
Q ss_pred HHHHHHHHHHHHHHHHHHhccCC---eeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEE
Q 001531 869 TEASKIAILNANYMAKRLEKHYP---ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTL 945 (1058)
Q Consensus 869 ~~~a~~~~~~a~yL~~~L~~~~~---v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~L 945 (1058)
....++..+++.++++.|+++.. |.|++ +. .....+++++.. .|+ .+.+
T Consensus 241 ~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~---------------l~---~~p~~~~~~~~~-~g~---------gg~~ 292 (376)
T PRK06460 241 KIRMDVINRNAEQIAEFLEGHPKVVKVYYPG---------------LK---SHVDYEIARRVL-KGF---------GGVL 292 (376)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCccEEECCC---------------CC---CCccHHHHHhhC-CCC---------ceEE
Confidence 77788888999999999997632 22221 11 123456777654 221 2434
Q ss_pred EEEcCCCCCHHHHHHHHHHHH
Q 001531 946 MIEPTESESKEELDRYCDALI 966 (1058)
Q Consensus 946 ris~te~~t~eeid~fi~aL~ 966 (1058)
-|.+ ..+.+++.+|++.|+
T Consensus 293 s~~~--~~~~~~~~~~~~~l~ 311 (376)
T PRK06460 293 SFEV--NGGQESALKVMKSLK 311 (376)
T ss_pred EEEE--cCcHHHHHHHHHhCC
Confidence 4443 335678888888886
No 477
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.46 E-value=5.7e-12 Score=144.69 Aligned_cols=272 Identities=18% Similarity=0.219 Sum_probs=171.1
Q ss_pred HHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEEEEEcCCCCCC
Q 001531 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1058)
Q Consensus 635 ~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~vv~V~~d~~g~ 714 (1058)
.++++.+++.+|.+..++..++|++. ++.++++.+ ++++|+++.+.++.+...+++.|++++.++.++++.
T Consensus 58 ~~lr~~ia~~~~~~~~~I~~t~G~~~--~l~~~~~~~-------~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~ 128 (337)
T PRK03967 58 DPLREAIAEFYGLDAENIAVGNGSDE--LISYLVKLF-------EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFT 128 (337)
T ss_pred HHHHHHHHHHhCcCcceEEEcCCHHH--HHHHHHHHh-------CCCeEEEeCCChHHHHHHHHHcCCeEEEeecCCCCC
Confidence 46778888888988777767777653 223333332 257899988876655556788999999999987778
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCC--CccCCc-EEEeC
Q 001531 715 INIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP--GYIGAD-VCHLN 790 (1058)
Q Consensus 715 iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~p--g~~GaD-i~~~s 790 (1058)
+|++++++++ ++++++++++| |.+|.+. +.++|.++++ +|+++++|+++.. +..-..+ .+.... |+..+
T Consensus 129 ~d~~~l~~~~----~~~~~v~~~~P~NPtG~~~-~~~~l~~i~~-~~~~ii~De~y~~-~~~~~~~~~~~~~~~vi~l~S 201 (337)
T PRK03967 129 IDGERIAEKA----KNASAVFICSPNNPTGNLQ-PEEEILKVLE-TGKPVVLDEAYAE-FSGKSLIGLIDEYPNLILLRT 201 (337)
T ss_pred cCHHHHHHhc----cCCCEEEEeCCCCCCCCCC-CHHHHHHHHh-cCCEEEEECchhh-hcccchHHHHhhCCCEEEEec
Confidence 9999998865 56778889999 5799987 6899999985 6999999998641 1110000 011112 55577
Q ss_pred CccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHH
Q 001531 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1058)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1058)
+.|+|++| |-++|++.+++++...+-.. ....+++ ..++. ++...+. ..+-+.+
T Consensus 202 ~SK~~~l~----GlRiG~iv~~~~~i~~~~~~--------------~~~~~~~--~~~q~----~~~~~l~--~~~~~~~ 255 (337)
T PRK03967 202 FSKAFGLA----GIRAGYAIANEEIIDALYRI--------------KPPFSLN--ILTMK----IVRLALD--HYDLIEE 255 (337)
T ss_pred chHhhcch----hhhheeeecCHHHHHHHHhh--------------cCCCCCC--HHHHH----HHHHHHh--CHHHHHH
Confidence 88888644 78899999887655433100 0111111 11121 1111111 2222333
Q ss_pred HHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEEEEcC
Q 001531 871 ASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPT 950 (1058)
Q Consensus 871 ~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lris~t 950 (1058)
..+...++++.+.+.|.+. .++ .+..+ +++++ .+.+.|.++|+.+........+++||++.
T Consensus 256 ~~~~~~~~r~~l~~~L~~~---~~~--~~~~~--~~~~~------------~~~~~l~~~gi~v~~~~~~~~~~~Ri~~~ 316 (337)
T PRK03967 256 RIDYIIKERERVRRELGEY---AYP--SDANF--LLLKL------------DAYDYLLENGIVVRKLSGRLEGHIRVTVG 316 (337)
T ss_pred HHHHHHHHHHHHHHHhccC---cCC--CCCcE--EEEhH------------HHHHHHHHCCEEEEeCCCCCCCeEEEecC
Confidence 4445556667777777653 121 12221 33332 26788889999875332112578999975
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q 001531 951 ESESKEELDRYCDALISIRE 970 (1058)
Q Consensus 951 e~~t~eeid~fi~aL~~i~~ 970 (1058)
+.++.++|+++|+++.+
T Consensus 317 ---~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 317 ---KREENDEFIKALKEIKE 333 (337)
T ss_pred ---CHHHHHHHHHHHHHHHH
Confidence 57889999999987654
No 478
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.46 E-value=6.4e-12 Score=147.51 Aligned_cols=273 Identities=15% Similarity=0.095 Sum_probs=170.9
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHH----HHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~----a~~~G~~vv~V~~ 709 (1058)
..++++.++++.|...+ +..++|..|..++++++. +++|+||++...++..... +...|++++++..
T Consensus 63 v~~lE~~la~leg~~~a-v~~~SG~aAi~~al~all--------~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~ 133 (432)
T PRK06702 63 LAAFEQKLAELEGGVGA-VATASGQAAIMLAVLNIC--------SSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP 133 (432)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHhc--------CCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence 45788999999998765 456777766644444331 3568999987655422232 4678999999964
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
.+|+++++++|+ ++|++|++++| |.++.+. ||++|+++||++|+++++|.+. +...+.+|.+.|+||++
T Consensus 134 ----~~d~~~l~~~I~---~~Tk~I~~e~pgnP~~~v~-Di~~I~~iA~~~gi~livD~T~--~tP~~~~pl~~GADIvv 203 (432)
T PRK06702 134 ----NLTADEIVALAN---DKTKLVYAESLGNPAMNVL-NFKEFSDAAKELEVPFIVDNTL--ATPYLCQAFEHGANIIV 203 (432)
T ss_pred ----CCCHHHHHHhCC---cCCeEEEEEcCCCcccccc-CHHHHHHHHHHcCCEEEEECCC--CchhhCChhhcCCCEEE
Confidence 479999999997 89999999998 4677776 8999999999999999999863 23345778899999999
Q ss_pred eCCccccccCCCCCCCceeEEEEeCCCCCCCCC--CCcc---------cCCCCCC-------C-CCCCCCCCCCccchhh
Q 001531 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPS--HPVV---------STGGIPA-------P-EKSQPLGTIAAAPWGS 849 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg--~~vg---------~~~d~g~-------~-~~~~~t~~i~sa~~g~ 849 (1058)
.|+.|+++-. ++--.|.++....+.-.... .++. .....++ + ...+..+. +.++
T Consensus 204 ~S~TKy~~Gh---sd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~sp--- 276 (432)
T PRK06702 204 HSTTKYIDGH---ASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGN-CMSP--- 276 (432)
T ss_pred EccccccCCC---cceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccC-CCCH---
Confidence 9999998622 11123444322211100000 0000 0000000 0 00011111 2111
Q ss_pred HHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCC---eeeccCCCccceEEEEecccccccCCCCHHHHHHH
Q 001531 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYP---ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR 926 (1058)
Q Consensus 850 ~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~---v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~ 926 (1058)
--+|+...|-+-+..+.++..+|+..+++.|+++.. +.|+| +. .-...+++++
T Consensus 277 ------~~a~l~~rgL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPg---------------l~---~~p~~~l~~~ 332 (432)
T PRK06702 277 ------FNAYISNIGLETLHLRMERHSENALAVAKWLADHERIEWVNYPG---------------LD---SNENYSLAQK 332 (432)
T ss_pred ------HHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCC---------------CC---CCccHHHHHH
Confidence 134456667677788888888999999999998632 22322 10 1134577777
Q ss_pred HHHCCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 001531 927 LMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALIS 967 (1058)
Q Consensus 927 L~~~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~ 967 (1058)
.+..|+ .+.+-|.+. .+.+...+|++.|+-
T Consensus 333 ~~~~g~---------gg~~sf~l~--~~~~~~~~f~~~l~l 362 (432)
T PRK06702 333 YLKKGA---------SGVLTFGIK--GGLEAAKEFIANVKL 362 (432)
T ss_pred hCcCCC---------ceEEEEEec--CCHHHHHHHHHhCcc
Confidence 654442 244444442 357788899999863
No 479
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.45 E-value=8e-12 Score=144.52 Aligned_cols=279 Identities=19% Similarity=0.285 Sum_probs=178.9
Q ss_pred ccccCCChhHHhhHHHHHHHHHHHHHHHhcC------CCCc-ceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHH
Q 001531 195 YTQYTPYQAEIAQGRLESLLNFQTMIADLTG------LPMS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQ 267 (1058)
Q Consensus 195 ~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G------~~~a-nasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps 267 (1058)
...|.|++. ..++++.+|++++ .+.. ++.+..|+.++...+...++. +++++|+++.-.|+.
T Consensus 37 ~~~Y~~~~g---------~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~~--~~~~~vlv~~P~y~~ 105 (363)
T PF00155_consen 37 FLGYPPPQG---------YPELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLKI--NPGDTVLVPDPCYPS 105 (363)
T ss_dssp CTSSTCTTH---------HHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHHS--STTSEEEEEESSSTH
T ss_pred cccCCCchh---------hHHHHHHHHHHhhhccCcccccceEEEEecccccchhhhhhcccc--cccccceecCCcccc
Confidence 456776541 2245678888888 6665 676666666666555544422 378999999999999
Q ss_pred HHHHHHHhhcCCCeEEEEeC----------chhhhc-cCC------CEeEEEEEcC-CCceeecc---HHHHHHHHHhcC
Q 001531 268 TIDICITRADGFDIKVVVSD----------LKDIDY-KSG------DVCGVLVQYP-GTEGEVLD---YGDFIKNAHANG 326 (1058)
Q Consensus 268 ~~~~~~~~a~~~gi~v~~v~----------~~~l~~-l~~------~t~~V~v~~p-n~~G~i~d---l~~I~~~a~~~g 326 (1058)
+...++. .|++++.++ +++|++ +++ ++++|++.+| |++|.+.+ +++|+++|+++|
T Consensus 106 ~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~ 181 (363)
T PF00155_consen 106 YIEAARL----LGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYN 181 (363)
T ss_dssp HHHHHHH----TTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTT
T ss_pred ccccccc----cCceeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccc
Confidence 9998764 366666655 345555 433 5688888998 68998765 566666699999
Q ss_pred cEEEEEeccccccCCCCCC--------cccce-EEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCC
Q 001531 327 VKVVMATDLLALTILKPPG--------ELGAD-IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSG 396 (1058)
Q Consensus 327 alliV~a~~~slg~l~~p~--------~~GaD-ivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g 396 (1058)
+++++| +..+......++ +.+.+ |++.|. |.||.| |--+|++.+++++.+.+.
T Consensus 182 ~~ii~D-e~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~----GlRvG~i~~~~~~~~~l~------------ 244 (363)
T PF00155_consen 182 IIIIVD-EAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLP----GLRVGYIVAPPELIERLR------------ 244 (363)
T ss_dssp SEEEEE-ETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSG----GGTEEEEEEEHHHHHHHH------------
T ss_pred cceeee-eceeccccCCCccCcccccccccccceeeeecccccccc----ccccccccchhhhhhhhh------------
Confidence 999994 344433333211 12233 777776 888654 223689999887776651
Q ss_pred CcceeeecccccccccccccCCCccchhHHHHHHHHHHHH-HhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--C
Q 001531 397 KPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAV-YHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--P 473 (1058)
Q Consensus 397 ~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~-~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~--~ 473 (1058)
+.. ++..++ ......+++++.. ....+-++++.+++.++..++.+.|++.| +.+..+ .
T Consensus 245 ----------------~~~-~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~-~~~~~~~~~ 305 (363)
T PF00155_consen 245 ----------------RFQ-RSGLSS-SPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIG-ITVLPPEAG 305 (363)
T ss_dssp ----------------HHH-HHTTSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SEEEHHSBS
T ss_pred ----------------hcc-cccccc-chhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhh-hheeeccCc
Confidence 000 011112 2222222222111 11112457788888999999999999887 887742 3
Q ss_pred CccEEEEecCC--HHHHHHHHHHc-Cceeeec----cCCeEEEEeccCCCHHHHHHHHHHH
Q 001531 474 FFDTVKVKCAD--AHAIASAAYKI-EMNLRVV----DSNTVTASFDETTTLEDVDKLFIVF 527 (1058)
Q Consensus 474 ~~~~v~i~~~~--~~~l~~~L~~~-GI~~~~~----~~~~lris~~~~~t~edid~ll~al 527 (1058)
++ +.+..+. ..++.+.|.++ ||.+... .++.+|+++ ...+++++++++++|
T Consensus 306 ~~--~~~~~~~~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 306 FF--LWVRLDPNDAEELAQELLEEYGILVRPGSYFGVPGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp SE--EEEEESHHHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred cE--EEEEcccchHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe-ccCCHHHHHHHHhhC
Confidence 33 1222232 57899999987 9987552 267899999 889999999999875
No 480
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.45 E-value=3.6e-11 Score=140.84 Aligned_cols=306 Identities=11% Similarity=0.124 Sum_probs=189.0
Q ss_pred ccCCCCCCCCChHHHHHHHH---hCCCcccccCCChhHHhhHHHHHHHHHHHHHHHhcCCC---CcceEeecchHHHHHH
Q 001531 170 FIGMGYYNTHVPPVILRNIM---ENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP---MSNASLLDEGTAAAEA 243 (1058)
Q Consensus 170 ~lG~g~~~~~~p~~i~~~i~---~~~~~~t~ytpyq~e~sqG~l~~l~e~q~~ia~L~G~~---~anasl~~~~Taa~ea 243 (1058)
.+|.|..+...|..+.+++. .++. ...|.+ .+|..+....+++.+++.+|.+ ..++.+..|++.++..
T Consensus 31 ~l~~g~~~~~~~~~~~~a~~~~~~~~~-~~~Y~~-----~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~ 104 (389)
T PRK05957 31 SLGQGVVSYPPPPEAIEALNNFLANPE-NHKYQA-----VQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMN 104 (389)
T ss_pred EccCCCCCCCCCHHHHHHHHHHHhCCC-CCCCCC-----CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHH
Confidence 56777766556665544432 2222 122433 3666677777888999999974 4468788888877776
Q ss_pred HHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cCCCEeEEEEEcC-CCceeec
Q 001531 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVL 313 (1058)
Q Consensus 244 ~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~ 313 (1058)
+++++. ++||+|+++.-.|+.+...++ ..|++++.++. +++++ +++++++|++.+| |.+|.+.
T Consensus 105 ~~~~~~---~~gd~Vlv~~P~y~~~~~~~~----~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~ 177 (389)
T PRK05957 105 AILAIT---DPGDEIILNTPYYFNHEMAIT----MAGCQPILVPTDDNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVY 177 (389)
T ss_pred HHHHhc---CCCCEEEEeCCCCcCHHHHHH----hcCCEEEEeecCCCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCc
Confidence 666652 379999999888877655443 46888877654 34555 6778999999888 6899988
Q ss_pred c---HHHHHHHHHhcCcEEEEEeccccccCCC-----C----CCcccceEEEecC-cccccccCCCCCc--eEEEEEehh
Q 001531 314 D---YGDFIKNAHANGVKVVMATDLLALTILK-----P----PGELGADIVVGSA-QRFGVPMGYGGPH--AAFLATSQE 378 (1058)
Q Consensus 314 d---l~~I~~~a~~~galliV~a~~~slg~l~-----~----p~~~GaDivvgs~-k~lg~P~~~GGP~--~G~l~~~~~ 378 (1058)
+ +++|+++||++|+++++|. ..+.-... + +...+--|+++|. |.||. || .|++++.++
T Consensus 178 ~~~~~~~i~~~a~~~~~~li~De-~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~------~GlRiG~~~~~~~ 250 (389)
T PRK05957 178 PEALLRAVNQICAEHGIYHISDE-AYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGF------ASWRIGYMVIPIH 250 (389)
T ss_pred CHHHHHHHHHHHHHcCcEEEEec-cchhccCCCCCccChhhCCCccCcEEEEecchhhccC------ccceeEEEecCHH
Confidence 6 8999999999999999943 22111111 1 1122234667776 87753 45 789998887
Q ss_pred hhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHH
Q 001531 379 YKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFA 458 (1058)
Q Consensus 379 ~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~ 458 (1058)
+++++.. .+.+...|++.. +..+++-+...+..-+++..+++.++.+++.
T Consensus 251 ~~~~~~~----------------------------~~~~~~~~~~~~--~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~ 300 (389)
T PRK05957 251 LLEAIKK----------------------------IQDTILICPPVV--SQYAALGALQVGKSYCQQHLPEIAQVRQILL 300 (389)
T ss_pred HHHHHHH----------------------------HHhhcccCCCcH--HHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 7766521 011112222211 1111110011122235666777788888899
Q ss_pred HHHhcCCCe-EEcCC--CCccEEEEecC-C--HHHHHHHHH-HcCceeeec-----c-CCeEEEEeccCCCHHHHHHHHH
Q 001531 459 LGLKKLGTV-EVQGL--PFFDTVKVKCA-D--AHAIASAAY-KIEMNLRVV-----D-SNTVTASFDETTTLEDVDKLFI 525 (1058)
Q Consensus 459 ~~L~~~G~~-~l~~~--~~~~~v~i~~~-~--~~~l~~~L~-~~GI~~~~~-----~-~~~lris~~~~~t~edid~ll~ 525 (1058)
+.|++++++ .+..+ .++ +.++++ + ..++.+.|. ++||.+.+. . ++.+|+++... +++++.+.++
T Consensus 301 ~~L~~~~~~~~~~~~~gg~~--~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~-~~~~l~~~~~ 377 (389)
T PRK05957 301 KSLGQLQDRCTLHPANGAFY--CFLKVNTDLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGAL-QKATAKEGIE 377 (389)
T ss_pred HHHHhcCCCccccCCCeeEE--EEEeCCCCCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecC-CHHHHHHHHH
Confidence 999887533 33221 112 223433 2 778999986 589987542 1 35799999754 5667666666
Q ss_pred HHh
Q 001531 526 VFA 528 (1058)
Q Consensus 526 al~ 528 (1058)
.|.
T Consensus 378 ~l~ 380 (389)
T PRK05957 378 RLV 380 (389)
T ss_pred HHH
Confidence 664
No 481
>PRK06855 aminotransferase; Validated
Probab=99.45 E-value=2.3e-11 Score=144.37 Aligned_cols=316 Identities=16% Similarity=0.118 Sum_probs=180.0
Q ss_pred hhcHHHHHHHHHHHHHHHhCCC--ceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHH-HHhCCcE
Q 001531 627 AQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-AAMCGMK 703 (1058)
Q Consensus 627 ~qG~~~~~~el~~~lael~G~~--~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~-a~~~G~~ 703 (1058)
.+|..++...+.+++.+..|.+ ..++..++|++.. +.+++. . . .+++.|+++++.+..+... ....|++
T Consensus 72 ~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~a--l~~~~~-l-~----~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~ 143 (433)
T PRK06855 72 TKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDA--IAKIYG-L-L----RREARVIGPSPAYSTHSSAEAAHAGYP 143 (433)
T ss_pred CCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHH--HHHHHH-h-c----CCCCeEEEeCCCCchHHHHHHHhcCCe
Confidence 4677666666777776665654 3456666666532 222222 1 1 2568899998866544433 2356999
Q ss_pred EEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--ccHHHHHHHHHHcCCEEEEeccCccc-ccCcC
Q 001531 704 IVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVGLT 777 (1058)
Q Consensus 704 vv~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~a-l~gl~ 777 (1058)
++.++.+++ ..+|+++|++++.+ .++++++++++| |.+|.+- +.+++|+++|+++|++++.|.++..- ..+-.
T Consensus 144 ~v~v~~~~~~~~~~d~~~l~~~~~~-~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~ 222 (433)
T PRK06855 144 PVTYRLDPENNWYPDLDDLENKVKY-NPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKK 222 (433)
T ss_pred EEEEecccccCCCCCHHHHHHHHhc-CCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC
Confidence 999998753 36899999999963 146788888899 5788875 35889999999999999999986311 11110
Q ss_pred -CC-Ccc---CCcEEEeCCccccccCCCCCCCceeEEEEeCCCC-CCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHH
Q 001531 778 -SP-GYI---GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLA-PFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1058)
Q Consensus 778 -~p-g~~---GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~-~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~ 851 (1058)
.+ ..+ +--|++.++.|+|++| |.++|++.+...-. +.+. ..+... ...+. ...+.+.+.|..
T Consensus 223 ~~sl~~~~~~~~~I~~~S~SK~~~~p----GlRiG~ii~p~~~~~~~~~-~~~~~~------~~~~~-~~~~~~~~~Q~a 290 (433)
T PRK06855 223 TVPLSEVIGDVPGIALKGISKELPWP----GSRCGWIEVYNADKDEVFK-KYINSI------LNAKM-IEVCSTTLPQMA 290 (433)
T ss_pred CCCHHHHcCcCCeEEEecCccccCCC----cceEEEEEEeCCchhhHHH-HHHHHH------HHhhc-cccCCChHHHHH
Confidence 11 111 1226778899998755 78999999842100 0000 000000 00000 011211112211
Q ss_pred HHHHHHHHHHHHc--hhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEeccccc-c------cC------
Q 001531 852 ILPISYTYIAMMG--SKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLK-N------TA------ 916 (1058)
Q Consensus 852 ~~~~a~a~l~~lG--~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~-~------~~------ 916 (1058)
+..++. -+ .+-+++..+....+.+.+.+.|++...+.+..+++.++ ++++++.-. . ..
T Consensus 291 ----~~~~l~-~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~--~w~~l~~~~~~~~~~~~~~~~~~~~ 363 (433)
T PRK06855 291 ----IPRIMS-HPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNRTNGAFY--MTVVFEDGVLNNKQSLPIENPEVKE 363 (433)
T ss_pred ----HHHhhc-CCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccCCCeeEE--EeeccccccccccccCCcchhhhHH
Confidence 112221 12 22344555555567778888887642332333344333 456665210 0 00
Q ss_pred ---------CCCHHHHHHH-HHHCCccc-cCCCC-CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001531 917 ---------GIEPEDVAKR-LMDYGFHG-PTMSW-PVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1058)
Q Consensus 917 ---------g~~~~~v~k~-L~~~Gi~~-~~~~~-p~~~~Lris~te~~t~eeid~fi~aL~~i~~e 971 (1058)
..+..+++.. +.+.|+.+ |...| +....+||++.. .+.++|+..++.|++++++
T Consensus 364 ~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~-~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 364 YVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLE-RDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred HHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECC-CcHHHHHHHHHHHHHHHHH
Confidence 0123455544 55789864 44444 323469999986 3588899888888887764
No 482
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.45 E-value=2.5e-11 Score=144.35 Aligned_cols=310 Identities=14% Similarity=0.165 Sum_probs=183.8
Q ss_pred hhcHHHHHHHHHHHHHHHhC----CCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHH-hCC
Q 001531 627 AQGYQEMFNNLGEWLCTITG----FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA-MCG 701 (1058)
Q Consensus 627 ~qG~~~~~~el~~~lael~G----~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~-~~G 701 (1058)
.+|..++...+.+.+.+.+| ++...+..++|++.. .-+++..+. .+++.|+++.+.++.+...+. ..|
T Consensus 94 ~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~a--l~~l~~~l~-----~pGD~Vlv~~P~Y~~f~~~~~~~~g 166 (447)
T PLN02607 94 YHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAA--NELLTFILA-----DPGDALLVPTPYYPGFDRDLRWRTG 166 (447)
T ss_pred CcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHH--HHHHHHHhC-----CCCCEEEEcCCCCcchHHHHHhcCC
Confidence 46776667677777776655 344455566665532 222222221 256889999988777765555 579
Q ss_pred cEEEEEcCCCC--CCCCHHHHHHHHHh---cCCCeEEEEEEcC-CCccccc--ccHHHHHHHHHHcCCEEEEeccCcccc
Q 001531 702 MKIVSVGTDAK--GNINIEELRKAAEA---NRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ 773 (1058)
Q Consensus 702 ~~vv~V~~d~~--g~iD~e~L~~~i~~---~~~~taaV~vt~P-n~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~al 773 (1058)
++++.|+++.+ +.+|++++++++++ .+.++++|++++| |++|.+- +.+++|.++|+++|+.+++|+++....
T Consensus 167 ~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~ 246 (447)
T PLN02607 167 VKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSV 246 (447)
T ss_pred cEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccc
Confidence 99999998754 46899999999863 1348899999999 5789875 258999999999999999999874221
Q ss_pred -c--CcCCCC----ccC----Cc--EEEeCCccccccCCCCCCCceeEEEEe-CCCCCCCCCCCcccCCCCCCCCCCCCC
Q 001531 774 -V--GLTSPG----YIG----AD--VCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPL 839 (1058)
Q Consensus 774 -~--gl~~pg----~~G----aD--i~~~s~hKtf~~P~g~GGPg~G~i~~~-~~l~~~lpg~~vg~~~d~g~~~~~~~t 839 (1058)
. .+.+.. ..+ .+ +++.++.|.|+.| |-++|++++. +++...+- .....
T Consensus 247 f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~----GlRvG~ivs~n~~l~~~~~--------------~~~~~ 308 (447)
T PLN02607 247 FSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLP----GFRVGTIYSYNDKVVTTAR--------------RMSSF 308 (447)
T ss_pred cCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCC----cceEEEEEEcCHHHHHHHH--------------HHhhc
Confidence 1 111100 111 12 3456778888654 7889999983 33322210 00001
Q ss_pred CCCCccchhhHHHHHHHHHHHHHHchhh-----HHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccc
Q 001531 840 GTIAAAPWGSALILPISYTYIAMMGSKG-----LTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKN 914 (1058)
Q Consensus 840 ~~i~sa~~g~~~~~~~a~a~l~~lG~eG-----l~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~ 914 (1058)
..+++ ..+.. ++ .++.... +.+..++..++.+.+.+.|++. .+.+..+++..+ ++++++....
T Consensus 309 ~~~s~--~~q~~-----~~--~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~~~~~~ag~f--vw~~L~~~~~ 376 (447)
T PLN02607 309 TLVSS--QTQHL-----LA--SMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIECLKGNAGLF--CWMNLSPLLE 376 (447)
T ss_pred CCCCH--HHHHH-----HH--HHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcccCCeeEE--EEEEchHhhc
Confidence 11221 11211 11 2222221 2333444556667788888874 332323333332 5677653211
Q ss_pred cCC-CCHHHHHHHHHH-CCccc-cCCCC--CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001531 915 TAG-IEPEDVAKRLMD-YGFHG-PTMSW--PVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1058)
Q Consensus 915 ~~g-~~~~~v~k~L~~-~Gi~~-~~~~~--p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~~~ 974 (1058)
... ....++.++|.+ +|+.+ +...| ..++.+||+++. .++++++..++.|.+++++-+.
T Consensus 377 ~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~-~~~~~l~~gl~Ri~~~l~~~~~ 440 (447)
T PLN02607 377 TPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFAN-MSEDTLEVALKRIHRFMDRRKT 440 (447)
T ss_pred CCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHHHh
Confidence 000 123467777765 79875 33334 246899999975 2477888888888887765443
No 483
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.44 E-value=4.2e-11 Score=131.74 Aligned_cols=275 Identities=20% Similarity=0.195 Sum_probs=169.6
Q ss_pred HHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCC-CccHH---HHHhCCcEEEEEcCCC
Q 001531 636 NLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAH-GTNPA---TAAMCGMKIVSVGTDA 711 (1058)
Q Consensus 636 el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saH-g~~pa---~a~~~G~~vv~V~~d~ 711 (1058)
.+++.++.|=|.-.. +...||-. |..+++.... +.+|.|+-+..-+ |++-. ....+|+++.+|+.
T Consensus 66 vlE~RiAaLEGG~aa-~a~aSG~A---A~~~ai~~la-----~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~-- 134 (426)
T COG2873 66 VLEERIAALEGGVAA-LAVASGQA---AITYAILNLA-----GAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDP-- 134 (426)
T ss_pred HHHHHHHHhhcchhh-hhhccchH---HHHHHHHHhc-----cCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCC--
Confidence 567888888765432 33445533 3344443321 2467787654444 44433 35789999999986
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEEeC
Q 001531 712 KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLN 790 (1058)
Q Consensus 712 ~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~~s 790 (1058)
.|++.++++|+ ++|++|+++.- |+.+.+- ||++|+++||++|++++|| |.++-.-+++|-+.|+||++.|
T Consensus 135 ---~d~~~~~~aI~---~nTkavf~EtigNP~~~v~-Die~ia~iAh~~gvpliVD--NT~atpyl~rP~~hGADIVvHS 205 (426)
T COG2873 135 ---DDPENFEAAID---ENTKAVFAETIGNPGLDVL-DIEAIAEIAHRHGVPLIVD--NTFATPYLCRPIEHGADIVVHS 205 (426)
T ss_pred ---CCHHHHHHHhC---cccceEEEEeccCCCcccc-CHHHHHHHHHHcCCcEEEe--cCCCcceecchhhcCCCEEEEe
Confidence 47999999997 99999999764 5666666 8999999999999999999 4555556899999999999999
Q ss_pred CccccccCCCCCCCceeEEEEeCCCCCCC-CCCCc---ccCCCC-CCC-----C--------C---CCCCCCCCccchhh
Q 001531 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFL-PSHPV---VSTGGI-PAP-----E--------K---SQPLGTIAAAPWGS 849 (1058)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~~~~~l~~~l-pg~~v---g~~~d~-g~~-----~--------~---~~~t~~i~sa~~g~ 849 (1058)
+.|+.+ +-|-.+|-+.+.....+.. +++.= .....+ |.. + | -+.++... +++
T Consensus 206 ~TK~ig----GhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~l-sPf-- 278 (426)
T COG2873 206 ATKYIG----GHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATL-SPF-- 278 (426)
T ss_pred eccccc----CCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhccccc-CcH--
Confidence 999984 3344455555553222211 22210 000001 100 0 0 00111111 121
Q ss_pred HHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHH
Q 001531 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD 929 (1058)
Q Consensus 850 ~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~ 929 (1058)
.+++...|-|-|--+.++.++||..+++.|+++.+|.+ |..+.+. .-...+++++...
T Consensus 279 -------nAfl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~------------V~YpgL~---~~~~h~la~kyl~ 336 (426)
T COG2873 279 -------NAFLLLQGLETLSLRMERHCENALKVAEFLENHPKVAW------------VNYPGLA---SHPYHALAKKYLP 336 (426)
T ss_pred -------HHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeee------------eecCCCC---CCcchhHHHhhcc
Confidence 24455667777777789999999999999998755431 2222111 1234577777666
Q ss_pred CCccccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001531 930 YGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1058)
Q Consensus 930 ~Gi~~~~~~~p~~~~Lris~te~~t~eeid~fi~aL~~i~~ 970 (1058)
+|.- +.|.|.+ .--.|.-.+|++.|+-...
T Consensus 337 ~g~g---------~vltF~~--kgg~ea~~~fi~~l~L~s~ 366 (426)
T COG2873 337 KGAG---------AVLTFGV--KGGYEAGKKFIDALKLFSH 366 (426)
T ss_pred CCCc---------eEEEEEe--cChHHHHHHHHHHHHHHHh
Confidence 6531 2233333 2335777889999875433
No 484
>PLN02231 alanine transaminase
Probab=99.44 E-value=2.5e-11 Score=146.93 Aligned_cols=315 Identities=16% Similarity=0.189 Sum_probs=183.4
Q ss_pred hhcHHHHHHHHHHHHHHHhCCC--ceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcEE
Q 001531 627 AQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1058)
Q Consensus 627 ~qG~~~~~~el~~~lael~G~~--~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~v 704 (1058)
++|..++...+.+++.+..|.+ ..++..++|++. ++.++++.+.. .+++.|+++.+.+..+...+...|.++
T Consensus 167 s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~--ai~~~~~~l~~----~~gd~Vli~~P~Y~~y~~~~~~~g~~~ 240 (534)
T PLN02231 167 SQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASP--AVHMMMQLLIR----SEKDGILCPIPQYPLYSASIALHGGTL 240 (534)
T ss_pred CCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHH--HHHHHHHHhcc----CCCCEEEEeCCCChhHHHHHHHcCCEE
Confidence 4676666666666666655654 345666666653 23333443321 246789999987777777788999999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHhcC---CCeEEEEEEcC-CCccccc--ccHHHHHHHHHHcCCEEEEeccCcc-cc-c
Q 001531 705 VSVGTDAK--GNINIEELRKAAEANR---DNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQ-V 774 (1058)
Q Consensus 705 v~V~~d~~--g~iD~e~L~~~i~~~~---~~taaV~vt~P-n~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~-al-~ 774 (1058)
+.++.+++ ..+|+++|++++++.. .++++|++.+| |.+|.+- +.+++|.++|+++|++++.|+++.. .. .
T Consensus 241 v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~ 320 (534)
T PLN02231 241 VPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVP 320 (534)
T ss_pred EEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCC
Confidence 99999864 4799999999997421 26889999999 5789874 3689999999999999999998642 11 1
Q ss_pred CcCC-C-C----ccCC---c--EE-EeCCccccccCCCCCCCceeEEEE---eCCCCCCCCCCCcccCCCCCCCCCCCCC
Q 001531 775 GLTS-P-G----YIGA---D--VC-HLNLHKTFCIPHGGGGPGMGPIGV---KKHLAPFLPSHPVVSTGGIPAPEKSQPL 839 (1058)
Q Consensus 775 gl~~-p-g----~~Ga---D--i~-~~s~hKtf~~P~g~GGPg~G~i~~---~~~l~~~lpg~~vg~~~d~g~~~~~~~t 839 (1058)
+-.. + . .+|. | ++ ..++.|+|. +..|.++|++.+ ++++...+- ....
T Consensus 321 ~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~---g~pGlRiGy~~~~~~~~~l~~~l~--------------k~~~- 382 (534)
T PLN02231 321 DKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYY---GECGKRGGYMEVTGFTSDVREQIY--------------KVAS- 382 (534)
T ss_pred CCCcccHHHHHhhhccccCCceEEEEeccCcccc---cCCccceEEEEEecCCHHHHHHHH--------------HHHh-
Confidence 1000 0 0 0121 2 33 457788752 223789999976 334433321 0001
Q ss_pred CCCCccchhhHHHHHHHHHHHHH--HchhhHH-------HHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEecc
Q 001531 840 GTIAAAPWGSALILPISYTYIAM--MGSKGLT-------EASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLR 910 (1058)
Q Consensus 840 ~~i~sa~~g~~~~~~~a~a~l~~--lG~eGl~-------~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~ 910 (1058)
.++|++..++.++ ...+.. .|...+. ++.+...++++++.+.|++...+.+..++|.++ +++++.
T Consensus 383 ~~~~s~~~~Q~~~----~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p~Ggfy--lw~~l~ 456 (534)
T PLN02231 383 VNLCSNISGQILA----SLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNKAEGAMY--LFPRIH 456 (534)
T ss_pred hhcCCChHHHHHH----HHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeeE--Eecccc
Confidence 1234332333221 111110 0111221 123445567788888888752333333444332 232332
Q ss_pred ccccc-------CC-CCHHHHHHHHH-HCCccc-cCCCCC-C--CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001531 911 GLKNT-------AG-IEPEDVAKRLM-DYGFHG-PTMSWP-V--PGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1058)
Q Consensus 911 ~~~~~-------~g-~~~~~v~k~L~-~~Gi~~-~~~~~p-~--~~~Lris~te~~t~eeid~fi~aL~~i~~e~~~ 974 (1058)
+... .+ .+...++++|. +.||.+ |...|. . ..++|+++. .++++|+..++.|.+..++..+
T Consensus 457 -lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~--~~~e~l~eal~RL~~~~~~~~~ 530 (534)
T PLN02231 457 -LPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVSRLTEFHKSFMD 530 (534)
T ss_pred -CcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHHHHH
Confidence 0000 00 11234566666 579974 444452 2 246999874 5678888888888887766543
No 485
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.44 E-value=8.9e-12 Score=149.12 Aligned_cols=282 Identities=13% Similarity=0.128 Sum_probs=161.6
Q ss_pred CCCCEEEEcCCCCCccHHHHHhC--CcEEEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--ccHH
Q 001531 678 HHRNVCIIPVSAHGTNPATAAMC--GMKIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGID 750 (1058)
Q Consensus 678 ~~r~~Vlip~saHg~~pa~a~~~--G~~vv~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~--~dI~ 750 (1058)
.++|+|+++.+.+..+...+.+. |++++.++.+++ ..+|+++|+++++ +++++|++++| |++|.+- +.++
T Consensus 188 ~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~---~~tkai~l~nP~NPTG~v~s~e~l~ 264 (527)
T PRK09275 188 KAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRD---PSIKALFLVNPSNPPSVAMSDESLE 264 (527)
T ss_pred CCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcC---CCCCEEEEeCCcCCcCCCCCHHHHH
Confidence 36789999998665555556666 456666665533 5799999999886 88999999999 4789875 3589
Q ss_pred HHHHHHHH--cCCEEEEeccCcccccCcCCCCcc--CCcEEEeCCccccccCCCCCCCceeEEEEeCC-----CCCCCCC
Q 001531 751 EICKIIHD--NGGQVYMDGANMNAQVGLTSPGYI--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-----LAPFLPS 821 (1058)
Q Consensus 751 eI~~lah~--~g~lv~vD~a~~~al~gl~~pg~~--GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~-----l~~~lpg 821 (1058)
+|+++|++ +|++++.|+++..-...+.+.... .--|++.++.|+|++| |+++|+++++++ ++..+|.
T Consensus 265 ~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~f~mt----G~RlG~i~~~~~~v~~~~i~~l~~ 340 (527)
T PRK09275 265 KIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKYFGAT----GWRLGVIALHEDNVFDKLIAKLPE 340 (527)
T ss_pred HHHHHHHhcCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhhhccCc----HhHHhhhhcCchhHHHHHHHhccH
Confidence 99999954 599999999874211111111111 1126677788988654 899999999875 4444431
Q ss_pred C--------CcccCCCCC-----C------CC-CCCCCCCCCccchhhHHHHHHH-HHHHHHHchhhHHHHHHHHHHHHH
Q 001531 822 H--------PVVSTGGIP-----A------PE-KSQPLGTIAAAPWGSALILPIS-YTYIAMMGSKGLTEASKIAILNAN 880 (1058)
Q Consensus 822 ~--------~vg~~~d~g-----~------~~-~~~~t~~i~sa~~g~~~~~~~a-~a~l~~lG~eGl~~~a~~~~~~a~ 880 (1058)
. .-..+.+.. . +. ....+.++++ ..|..++..+ .+.+. -+.+.+++..+....+.+
T Consensus 341 ~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~--p~Q~a~al~~~~all~-~~~~~~~~~~~~~~~Rr~ 417 (527)
T PRK09275 341 EKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLST--PQQVQMALFSLFALLD-EEDAYKKAMKDIIRRRYK 417 (527)
T ss_pred HHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCC--HHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 1 000000000 0 00 0011222222 2233211111 11111 122333444444555666
Q ss_pred HHHHHHhccCCeeeccCCCccceEEEEeccccccc-----------CCCCHHHHHHHHHH-CCcc-ccCCCCC-CCCEEE
Q 001531 881 YMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNT-----------AGIEPEDVAKRLMD-YGFH-GPTMSWP-VPGTLM 946 (1058)
Q Consensus 881 yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~~~-----------~g~~~~~v~k~L~~-~Gi~-~~~~~~p-~~~~Lr 946 (1058)
.+.+.|. +.+....+++.++ +.+|+..+... .+.+..+++.+|.+ .|+. +|+..|. ..+.+|
T Consensus 418 ~l~~~Lg--~~~~~~~p~g~fY--~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~~~~vR 493 (527)
T PRK09275 418 ALYEGLG--LPEPEDPNNAAYY--TLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGPEWSVR 493 (527)
T ss_pred HHHHHcC--CCCcCCCCCeeEE--EEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCCCCCeEE
Confidence 6767763 2222112233333 34565432100 02356788889885 5886 3555552 257899
Q ss_pred EEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001531 947 IEPTESESKEELDRYCDALISIREEIAQ 974 (1058)
Q Consensus 947 is~te~~t~eeid~fi~aL~~i~~e~~~ 974 (1058)
||+.. .+++++....+.|++++++.++
T Consensus 494 is~a~-~~~~~~~~~~~rl~~~l~~y~~ 520 (527)
T PRK09275 494 VSLAN-LNEEDYAKIGKAIRKLLDEYYE 520 (527)
T ss_pred EEEec-CCHHHHHHHHHHHHHHHHHHHH
Confidence 99964 3577888888888888877654
No 486
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.44 E-value=1.7e-11 Score=138.29 Aligned_cols=354 Identities=15% Similarity=0.199 Sum_probs=220.5
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcCCcccc--cccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhHHHHHHHHH
Q 001531 139 MKFSKFDEGLTESQMIEHMQKLASMNKVYK--SFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNF 216 (1058)
Q Consensus 139 ~~lp~~~~~~sE~e~~~~~~~la~~n~~~~--~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e~sqG~l~~l~e~ 216 (1058)
..|| ..+++.+++++.+++....+-.+. --.|..++. -|... .+.. +=+.-|+|..+.+.++.-+.--+.
T Consensus 54 ~~lP--~~gl~~d~v~~~i~~~~~ld~~~~~~~vS~~v~~~--~~~~~--~l~~--~~~~k~N~l~~d~fp~~~~~e~~~ 125 (491)
T KOG1383|consen 54 FTLP--SKGLPKDAVLELINDELMLDGNPRLGLASGVVYWG--EPELD--KLIM--EAYNKFNPLHPDEFPVVRKLEAEC 125 (491)
T ss_pred ecCC--CCCCCHHHHHHHHHHHhccCCCcccCeeeEEEecC--Ccchh--hHHH--HHHhhcCccCccccchhHHHHHHH
Confidence 3577 589999999999998766543321 123444433 22221 1111 012333666777888888888888
Q ss_pred HHHHHHhcCCCCc-ceEeecchHHHHHHHHHHhcccc-C----CCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch-
Q 001531 217 QTMIADLTGLPMS-NASLLDEGTAAAEAMAMCNNIQK-G----KKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK- 289 (1058)
Q Consensus 217 q~~ia~L~G~~~a-nasl~~~~Taa~ea~~~a~~~~~-~----~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~- 289 (1058)
-.|+|.|++.+.+ ....+.|+|.++.++..+.+..+ . ....|+++.++|.++ ..+++.++++++.++++
T Consensus 126 Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~----eK~a~yf~v~l~~V~~~~ 201 (491)
T KOG1383|consen 126 VNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAF----EKAARYFEVELREVPLDE 201 (491)
T ss_pred HHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHH----HHHHhhEEEEEEeeeccc
Confidence 8999999998753 44456677754333332222111 1 123566666666544 44566789999998775
Q ss_pred -----h---hhc-cCCCEeEEEEEcCC-CceeeccHHHHHHHHHh-cCcEEEEEeccccccC---CCCCCcccc-----e
Q 001531 290 -----D---IDY-KSGDVCGVLVQYPG-TEGEVLDYGDFIKNAHA-NGVKVVMATDLLALTI---LKPPGELGA-----D 350 (1058)
Q Consensus 290 -----~---l~~-l~~~t~~V~v~~pn-~~G~i~dl~~I~~~a~~-~galliV~a~~~slg~---l~~p~~~Ga-----D 350 (1058)
| +.+ ++++|++|+...|| ++|.++|+++|.++.-+ ++..++|++.+-++-. ...+.+||. -
T Consensus 202 ~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~V~ 281 (491)
T KOG1383|consen 202 GDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVPGVT 281 (491)
T ss_pred cceEecHHHHHHHhccceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccccccCCCCce
Confidence 2 233 78999999999996 69999999999999999 9999999653322211 112234443 2
Q ss_pred EEEecCcccccccCCCCCceE-EEEEehhhhhcCCCcEEeeeecCC-CC-cceeeecccccccccccccCCCccchhHHH
Q 001531 351 IVVGSAQRFGVPMGYGGPHAA-FLATSQEYKRMMPGRIVGVSIDSS-GK-PALRVAMQTREQHIRRDKATSNICTAQALL 427 (1058)
Q Consensus 351 ivvgs~k~lg~P~~~GGP~~G-~l~~~~~~~~~lpgrivG~s~d~~-g~-~~~~l~lqtreq~irRekaTsni~t~~~l~ 427 (1058)
-.-.+++++|.-+ +|.+ +++..+++. |-.++-. .|=. |. ..+.+.. -++.+++ .
T Consensus 282 Sisa~~HKYGl~~----~G~~~vl~r~k~~~---~~q~~~~-~~w~Gg~y~s~Tlng---------SR~g~~v------a 338 (491)
T KOG1383|consen 282 SISADGHKYGLAP----AGSSWVLYRNKELL---PHQLFFH-TDWLGGIYASPTLNG---------SRPGSQV------A 338 (491)
T ss_pred eEeeccceeeeee----cCcEEEEEcccccc---cceEEEe-ccccCccccCccccc---------CCcccHH------H
Confidence 2233346665422 2333 444444432 2222211 1111 11 1123322 1222222 1
Q ss_pred HHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC--HHHHHHHHHHcCceeeec-cC
Q 001531 428 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVV-DS 504 (1058)
Q Consensus 428 a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~--~~~l~~~L~~~GI~~~~~-~~ 504 (1058)
+.-|+ +..+|.+|+++..+++.+.+.+|+++|++++++.++++|...-+.+.... ..++.+.|.++||++..+ .|
T Consensus 339 ~~wa~--~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~~~i~elsd~l~~~GW~lnalq~P 416 (491)
T KOG1383|consen 339 AQWAA--LMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSNDVNIFELSDLLRKKGWILNALQFP 416 (491)
T ss_pred HHHHH--HHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEccCCccchhhhhHHHHhcCcCccccCCC
Confidence 11222 47899999999999999999999999999976999877644323333333 689999999999999876 46
Q ss_pred CeEEEEeccCCCHHHH-HHHHHHHhC
Q 001531 505 NTVTASFDETTTLEDV-DKLFIVFAG 529 (1058)
Q Consensus 505 ~~lris~~~~~t~edi-d~ll~al~~ 529 (1058)
..+.+|++-.+..+++ ++|+..+..
T Consensus 417 ~a~Hi~vt~~~~~~~~A~~~v~Di~~ 442 (491)
T KOG1383|consen 417 AAIHICVTRVHAREDVADRFVADIRK 442 (491)
T ss_pred CceEEEEEeeeccHHHHHHHHHHHHH
Confidence 7999999999999986 667766653
No 487
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.44 E-value=3.2e-11 Score=144.38 Aligned_cols=307 Identities=19% Similarity=0.198 Sum_probs=181.3
Q ss_pred hcHHHHHHHHHHHHHHHhC----CCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHH-hCCc
Q 001531 628 QGYQEMFNNLGEWLCTITG----FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA-MCGM 702 (1058)
Q Consensus 628 qG~~~~~~el~~~lael~G----~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~-~~G~ 702 (1058)
+|..++...+.+++.+..| ++...+..++|++.. +.+++..+. .+++.|+++.+.+..+...+. ..|+
T Consensus 86 ~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~a--l~~l~~~l~-----~pGd~Vlv~~P~Y~~~~~~~~~~~g~ 158 (468)
T PLN02450 86 HGLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSA--NETLMFCLA-----EPGDAFLLPTPYYPGFDRDLKWRTGV 158 (468)
T ss_pred CChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHH--HHHHHHHhC-----CCCCEEEECCCCCCchHHHHhhcCCc
Confidence 5766666666666665555 344456666666532 223333321 357899999987777666566 5899
Q ss_pred EEEEEcCCC--CCCCCHHHHHHHHHhc---CCCeEEEEEEcCC-Cccccc--ccHHHHHHHHHHcCCEEEEeccCccc-c
Q 001531 703 KIVSVGTDA--KGNINIEELRKAAEAN---RDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-Q 773 (1058)
Q Consensus 703 ~vv~V~~d~--~g~iD~e~L~~~i~~~---~~~taaV~vt~Pn-~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~a-l 773 (1058)
+++.|++++ +..+|+++|++++++. ..++++|++++|+ ++|.+- +.+++|.++|+++|+++++|+++... +
T Consensus 159 ~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f 238 (468)
T PLN02450 159 EIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVF 238 (468)
T ss_pred EEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEcccccccc
Confidence 999999863 3578999999988632 2478899999995 789874 35889999999999999999987421 1
Q ss_pred cC--cCCCC----c---cC---Cc--EEEeCCccccccCCCCCCCceeEEEEeCCC-CCCCCCCCcccCCCCCCCCCCCC
Q 001531 774 VG--LTSPG----Y---IG---AD--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHL-APFLPSHPVVSTGGIPAPEKSQP 838 (1058)
Q Consensus 774 ~g--l~~pg----~---~G---aD--i~~~s~hKtf~~P~g~GGPg~G~i~~~~~l-~~~lpg~~vg~~~d~g~~~~~~~ 838 (1058)
.+ +.... + .| .+ +++.++.|.|+.| |.++|++++.++. ...+- . . ..
T Consensus 239 ~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~----GlRiG~li~~~~~l~~~~~-~------------~-~~ 300 (468)
T PLN02450 239 DSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLP----GFRVGAIYSNDEMVVSAAT-K------------M-SS 300 (468)
T ss_pred CCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCC----CccEEEEEECCHHHHHHHH-H------------H-hh
Confidence 11 11100 0 01 11 4566788888654 8899999987542 22110 0 0 00
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHHchh-----hHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCccceEEEEeccccc
Q 001531 839 LGTIAAAPWGSALILPISYTYIAMMGSK-----GLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLK 913 (1058)
Q Consensus 839 t~~i~sa~~g~~~~~~~a~a~l~~lG~e-----Gl~~~a~~~~~~a~yL~~~L~~~~~v~~~g~~~~~~~e~vv~~~~~~ 913 (1058)
...++ ...+. ++. .++... -+++..++..++.+.+.+.|++. .+.+..+++.++ ++++++...
T Consensus 301 ~~~~s--~~~Q~----a~~---~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~~~~~~~g~f--lwi~l~~~~ 368 (468)
T PLN02450 301 FGLVS--SQTQY----LLS---ALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-GIKCLKSNAGLF--CWVDMRHLL 368 (468)
T ss_pred cCCCC--HHHHH----HHH---HHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCceEE--EEEEchHhc
Confidence 01112 11121 111 222221 23444555566777888888875 332222333322 456664211
Q ss_pred ccCCC-CHHHHHHHHH-HCCcccc-CCCC--CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001531 914 NTAGI-EPEDVAKRLM-DYGFHGP-TMSW--PVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1058)
Q Consensus 914 ~~~g~-~~~~v~k~L~-~~Gi~~~-~~~~--p~~~~Lris~te~~t~eeid~fi~aL~~i~~e~ 972 (1058)
..... ...++.++|. ++|+.+. ...| +.++.+||+++. .+++++++.++.|+++++..
T Consensus 369 ~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~-~~~~~l~~~l~ri~~~l~~~ 431 (468)
T PLN02450 369 KSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFAN-MSEETLDLAMKRLKSFVESD 431 (468)
T ss_pred CcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecC-CCHHHHHHHHHHHHHHHHhc
Confidence 10011 1245677776 5799863 3233 235789999985 34688888888888776543
No 488
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.44 E-value=1.2e-11 Score=145.92 Aligned_cols=223 Identities=15% Similarity=0.107 Sum_probs=141.8
Q ss_pred HHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCC-ccHHHHH---hCCcEEEEEcCC
Q 001531 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHG-TNPATAA---MCGMKIVSVGTD 710 (1058)
Q Consensus 635 ~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg-~~pa~a~---~~G~~vv~V~~d 710 (1058)
.++++.++++.|.+.+ +..++|.++..+++.++. .++++|+++...++ ++..... ..|+++..++.
T Consensus 61 ~~Le~~lA~l~g~~~~-l~~ssG~~Ai~~al~al~--------~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~- 130 (425)
T PRK06084 61 DVLEQRVAALEGGVGA-LAVASGMAAITYAIQTIA--------EAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH- 130 (425)
T ss_pred HHHHHHHHHHhCCCce-eEehhHHHHHHHHHHHHh--------CCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECC-
Confidence 4788999999997654 455677765544433331 24578888766554 3332222 36778777764
Q ss_pred CCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEEe
Q 001531 711 AKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHL 789 (1058)
Q Consensus 711 ~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~~ 789 (1058)
.|+++|+++++ +++++|++++| |.+|.+. |+++|+++||++|+++++|+++.. +.+..|.++|+|+++.
T Consensus 131 ----~d~e~le~ai~---~~tklV~lesp~NPtG~v~-dl~~I~~la~~~~i~vVvD~a~a~--~~~~~p~~~gaDivv~ 200 (425)
T PRK06084 131 ----DDIAALEALID---ERTKAVFCESIGNPAGNII-DIQALADAAHRHGVPLIVDNTVAT--PVLCRPFEHGADIVVH 200 (425)
T ss_pred ----CCHHHHHHHhc---cCCcEEEEeCCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCcc--cccCChhhcCCCEEEE
Confidence 48999999997 78999999998 6789987 799999999999999999998653 2345677789999999
Q ss_pred CCccccccCCCCCCCceeEEEEeCCCC-CCCCCC--CcccC-CCC-CC-----CCC-----------CCCCCCCCccchh
Q 001531 790 NLHKTFCIPHGGGGPGMGPIGVKKHLA-PFLPSH--PVVST-GGI-PA-----PEK-----------SQPLGTIAAAPWG 848 (1058)
Q Consensus 790 s~hKtf~~P~g~GGPg~G~i~~~~~l~-~~lpg~--~vg~~-~d~-g~-----~~~-----------~~~t~~i~sa~~g 848 (1058)
++||+|+.+ |..-+|+++.+.... ..+... ++..+ .++ +- .++ ....+..-+
T Consensus 201 S~tK~l~G~---g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~---- 273 (425)
T PRK06084 201 SLTKYIGGH---GTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALS---- 273 (425)
T ss_pred Cchhccccc---ccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCCC----
Confidence 999999522 222245555433211 010000 00000 000 00 000 000111110
Q ss_pred hHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccC
Q 001531 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHY 890 (1058)
Q Consensus 849 ~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~~ 890 (1058)
.--+++.+.|-+.+..+.++..++|..+++.|+++.
T Consensus 274 ------~~~a~l~lrgl~tl~~R~~~~~~na~~la~~L~~~p 309 (425)
T PRK06084 274 ------PFNAFLILQGLETLALRMERHTENALKVARYLQQHP 309 (425)
T ss_pred ------HHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCC
Confidence 113445566777788888889999999999999863
No 489
>PRK09105 putative aminotransferase; Provisional
Probab=99.44 E-value=4.5e-11 Score=139.08 Aligned_cols=266 Identities=14% Similarity=0.108 Sum_probs=173.8
Q ss_pred HHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---
Q 001531 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1058)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~--- 289 (1058)
..++++.+|+.+|.++.++.+..|++.++..++.++. ++||+|++++-.|+.+...++ ..|++++.++.+
T Consensus 80 ~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~---~~gd~Vli~~P~y~~~~~~~~----~~g~~~~~v~~~~~~ 152 (370)
T PRK09105 80 EDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFT---SPTAGLVTADPTYEAGWRAAD----AQGAPVAKVPLRADG 152 (370)
T ss_pred HHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHc---CCCCEEEEeCCChHHHHHHHH----HcCCeEEEecCCCCC
Confidence 3456778999999999999999999988777666652 379999999999998877643 468888887652
Q ss_pred -----hhhccCCCEeEEEEEcC-CCceeeccHHHHHHHHHh--cCcEEEEEeccccccCCCCCC---cccceEEEe-cC-
Q 001531 290 -----DIDYKSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHA--NGVKVVMATDLLALTILKPPG---ELGADIVVG-SA- 356 (1058)
Q Consensus 290 -----~l~~l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~--~galliV~a~~~slg~l~~p~---~~GaDivvg-s~- 356 (1058)
++++..+++++|++.+| |.+|.+.+.++|.++++. +|+++++|.-...++...+.. +.+-++++. |.
T Consensus 153 ~~d~~~l~~~~~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfS 232 (370)
T PRK09105 153 AHDVKAMLAADPNAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFS 232 (370)
T ss_pred CCCHHHHHhcCCCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEEEeccc
Confidence 22222356888999998 789999988888777654 488888843111221111111 224465554 54
Q ss_pred cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHH
Q 001531 357 QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAV 436 (1058)
Q Consensus 357 k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~ 436 (1058)
|.||.| |=-+||+++++++++.+- +. ...+.+ .. +..+++ ..
T Consensus 233 K~~g~~----GlRiG~~v~~~~~i~~l~----------------------------~~-~~~~~~-~~---~~~aa~-~~ 274 (370)
T PRK09105 233 KLYGMA----GMRLGLAAARPDLLAKLA----------------------------RF-GHNPLP-VP---AAAAGL-AS 274 (370)
T ss_pred HhhcCC----ccceeeeecCHHHHHHHH----------------------------hc-CCCCcC-HH---HHHHHH-HH
Confidence 777543 112789988877766541 00 111111 11 112222 11
Q ss_pred HhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC-HHHHHHHHHHcCceeeec---cCCeEEEEec
Q 001531 437 YHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVV---DSNTVTASFD 512 (1058)
Q Consensus 437 ~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~-~~~l~~~L~~~GI~~~~~---~~~~lris~~ 512 (1058)
+..++-+++..++..++.+++.+.|++.| +++..+ ...-+.++.+. ..++.+.|.++||.++.. .++.+|+++.
T Consensus 275 L~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~-~~~f~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~Ris~~ 352 (370)
T PRK09105 275 LRDPKLVPQRRAENAAVREDTIAWLKKKG-YKCTPS-QANCFMVDVKRPAKAVADAMAKQGVFIGRSWPIWPNWVRVTVG 352 (370)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHHHHCC-CCcCCC-CCcEEEEeCCCCHHHHHHHHHHCCcEEecCCCCCCCeEEEEcC
Confidence 22234456667778888889999999887 776532 11123355543 788999999999988432 2578999977
Q ss_pred cCCCHHHHHHHHHHHh
Q 001531 513 ETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 513 ~~~t~edid~ll~al~ 528 (1058)
+++++++|+++|.
T Consensus 353 ---~~~~~~~l~~al~ 365 (370)
T PRK09105 353 ---SEEEMAAFRSAFA 365 (370)
T ss_pred ---CHHHHHHHHHHHH
Confidence 6888999999885
No 490
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.43 E-value=5.9e-11 Score=138.33 Aligned_cols=264 Identities=18% Similarity=0.205 Sum_probs=163.4
Q ss_pred eeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEE-cCCCCCccHHHHHhCCcEE---------EEEcCCCCCCCCHHHH
Q 001531 651 SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGMKI---------VSVGTDAKGNINIEEL 720 (1058)
Q Consensus 651 ~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vli-p~saHg~~pa~a~~~G~~v---------v~V~~d~~g~iD~e~L 720 (1058)
.+..++|++++++++..+|.| . ++++|++ ..++||+.-..+...|.+. ..++.. -..|++++
T Consensus 87 ~~~~~SGseA~~~Al~~ar~~---~---~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~dl~~l 158 (375)
T PRK04260 87 AFFCNSGAEANEAAIKIARKA---T---GKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA--IFNDLNSV 158 (375)
T ss_pred EEEcCccHHHHHHHHHHHHHh---c---CCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe--CCCCHHHH
Confidence 467788988887777777654 1 2445554 5788987655443322211 111110 02489999
Q ss_pred HHHHHhcCCCeEEEEEEcCC-Ccccccc---cHHHHHHHHHHcCCEEEEeccCcccccCcCCCC---c--cCCcEEEeCC
Q 001531 721 RKAAEANRDNLSTLMVTYPS-THGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG---Y--IGADVCHLNL 791 (1058)
Q Consensus 721 ~~~i~~~~~~taaV~vt~Pn-~~G~i~~---dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg---~--~GaDi~~~s~ 791 (1058)
+++++ +++++|+++.++ ..|++.+ .+++|.++|+++|+++++|+++. +++.-..+. . ...|+++ +
T Consensus 159 ~~~l~---~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~-g~g~~g~~~~~~~~~~~pdi~t--~ 232 (375)
T PRK04260 159 KALVN---KNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQT-GMGRTGKLYAFEHYGIEPDIFT--L 232 (375)
T ss_pred HHhcC---CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccchhhhHhhCCCCCEEE--e
Confidence 99885 688899998874 5678753 38999999999999999999963 222111111 2 2357664 4
Q ss_pred ccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHH
Q 001531 792 HKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEA 871 (1058)
Q Consensus 792 hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~ 871 (1058)
+|.|+ +|-.+|++++++++.+.+... . ..+. +.++.+.++++.+.+..+..+++.+
T Consensus 233 sK~l~-----~G~~ig~~~~~~~~~~~~~~~------------~--~~~t----~~~~~~~~~aa~a~l~~~~~~~~~~- 288 (375)
T PRK04260 233 AKGLA-----NGVPVGAMLAKSSLGGAFGYG------------S--HGST----FGGNKLSMAAASATLDIMLTAGFLE- 288 (375)
T ss_pred ccccc-----CCcceEEEEEcHHHHhhcCCC------------C--CCCC----CCcCHHHHHHHHHHHHHHHhhHHHH-
Confidence 68774 344589999987765543210 0 0011 2234455666677777765555433
Q ss_pred HHHHHHHHHHHHHHHhcc---CC-e-eeccCCCccceEEEEecccccccCCCCHHHHHHHHHHCCccccCCCCCCCCEEE
Q 001531 872 SKIAILNANYMAKRLEKH---YP-I-LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLM 946 (1058)
Q Consensus 872 a~~~~~~a~yL~~~L~~~---~~-v-~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~Lr 946 (1058)
+..++.++++++|.+. .+ + .+.+ .+. .+.+++. .+...+.++|.++|+.+.... .+.+|
T Consensus 289 --~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~---~~~~~~~-------~~~~~~~~~l~~~Gi~v~~~~---~~~lR 352 (375)
T PRK04260 289 --QALENGNYLQEQLQKALQDKETVTTVRG-LGY---MIGIETT-------ADLSQLVEAARDKGLIVLTAG---TNVIR 352 (375)
T ss_pred --HHHHHHHHHHHHHHHHHhhCCCeeEEec-cce---EEEEEec-------CcHHHHHHHHHhCCCEEecCC---CCEEE
Confidence 3334455556655543 22 1 1212 121 1344432 256789999999999874322 37899
Q ss_pred EEcCCCCCHHHHHHHHHHHHHH
Q 001531 947 IEPTESESKEELDRYCDALISI 968 (1058)
Q Consensus 947 is~te~~t~eeid~fi~aL~~i 968 (1058)
++|+...+++||+++++.|+++
T Consensus 353 ~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 353 LLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred EcCCCccCHHHHHHHHHHHHHh
Confidence 9999999999999999999765
No 491
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.43 E-value=4.7e-11 Score=138.17 Aligned_cols=264 Identities=13% Similarity=0.066 Sum_probs=175.0
Q ss_pred HHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc-----
Q 001531 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL----- 288 (1058)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~----- 288 (1058)
.++++.+|+++|.++.++.+..|++.+...++.++. ++||+|+++.-.++.+...++ ..|+++..++.
T Consensus 67 ~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~---~~gd~v~~~~p~y~~~~~~~~----~~g~~~~~~~~~~~~~ 139 (359)
T PRK03158 67 PELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRALL---NPGTNTVMAEPTFSQYRHNAI----IEGAEVREVPLKDGGH 139 (359)
T ss_pred HHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHHh---CCCCEEEEcCCCHHHHHHHHH----HcCCeEEEEecCCCCc
Confidence 456789999999988889888888887766655552 378999999998888776543 35777777654
Q ss_pred --hhhhc-cCCCEeEEEEEcC-CCceeeccHHHHHHHHHh--cCcEEEEEeccccccCCC----CC----CcccceEEEe
Q 001531 289 --KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHA--NGVKVVMATDLLALTILK----PP----GELGADIVVG 354 (1058)
Q Consensus 289 --~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~--~galliV~a~~~slg~l~----~p----~~~GaDivvg 354 (1058)
+++++ +++++++|++.+| |.+|.+.+.++|.++++. +|+++++| +........ ++ ...+-.|++.
T Consensus 140 d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~D-e~y~~~~~~~~~~~~~~~~~~~~~vi~~~ 218 (359)
T PRK03158 140 DLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLD-EAYYEYVTAEDYPDTLPLLEKYENLIVLR 218 (359)
T ss_pred CHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEE-CchHhhcCCcccccHHHHHHhcCCEEEEE
Confidence 34544 6678899999998 789999999999988887 58888884 332211111 11 1234567888
Q ss_pred cC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHH
Q 001531 355 SA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1058)
Q Consensus 355 s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~ 433 (1058)
|. |.||.| |--.||+.+++++++.+- +.+.+ .+++......++++
T Consensus 219 S~SK~~g~~----GlRiG~~v~~~~~~~~~~----------------------------~~~~~--~~~~~~~q~~~~~~ 264 (359)
T PRK03158 219 TFSKAYGLA----ALRVGYGIASEELIEKLN----------------------------IARPP--FNTTRIAQYAAIAA 264 (359)
T ss_pred echHhhcCc----chhhehhcCCHHHHHHHH----------------------------HhcCC--CCCCHHHHHHHHHH
Confidence 86 888643 222488888877766541 00111 12222211111111
Q ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC-CCccEEEEecCC-HHHHHHHHHHcCceeeec----cCCeE
Q 001531 434 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCAD-AHAIASAAYKIEMNLRVV----DSNTV 507 (1058)
Q Consensus 434 yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~-~~~~~v~i~~~~-~~~l~~~L~~~GI~~~~~----~~~~l 507 (1058)
+...+-++++.++..++.+++.+.|++.| +++... ..| +.+..+. ..++.+.|.++||.+... .++.+
T Consensus 265 ---l~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~g~~--i~~~~~~~~~~~~~~l~~~gv~v~~g~~f~~~~~i 338 (359)
T PRK03158 265 ---LEDQAFLKECVEKNAEGLEQYYAFCKEYG-LFYYPSQTNF--IFVDTGRDANELFEALLKKGYIVRSGAALGFPTGV 338 (359)
T ss_pred ---hcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CeeCCCcCcE--EEEECCCCHHHHHHHHHHCCeEEeeCCCCCCCCeE
Confidence 11122245666666777778888888886 776532 222 3344443 788999999999988652 25789
Q ss_pred EEEeccCCCHHHHHHHHHHHh
Q 001531 508 TASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 508 ris~~~~~t~edid~ll~al~ 528 (1058)
|+++. +.+|.++++++|.
T Consensus 339 Ri~~~---~~~~~~~l~~al~ 356 (359)
T PRK03158 339 RITIG---LKEQNDKIIELLK 356 (359)
T ss_pred EEecC---CHHHHHHHHHHHH
Confidence 99977 8999999999985
No 492
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.43 E-value=1.3e-11 Score=142.75 Aligned_cols=214 Identities=20% Similarity=0.193 Sum_probs=141.3
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHh----CCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAM----CGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~----~G~~vv~V~~ 709 (1058)
..++++.++++.|.+.+ +..++|.++.. +++..+ +++++||++...+|..+..... .++++..
T Consensus 56 ~~~le~~lA~leg~~~~-v~~~sG~aAi~---~~l~~l------~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~--- 122 (364)
T PRK07269 56 RAKLEETLAAIESADYA-LATSSGMSAIV---LAFSVF------PVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTY--- 122 (364)
T ss_pred HHHHHHHHHHHhCCCeE-EEeCCHHHHHH---HHHHHh------CCCCEEEEecCCcCchHHHHHHHHhcCcEEEEe---
Confidence 45788999999998765 45666765543 222221 2467899987777655543221 1333221
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
..|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|++... ..+.+|-..|+|+++
T Consensus 123 ----~~d~~~l~~~i~---~~TklV~lesP~NPtg~~~-di~~I~~la~~~gi~vvvD~t~~~--~~~~~pl~~gaDivv 192 (364)
T PRK07269 123 ----ANTEEELIAAIE---EDTDIVYIETPTNPLMVEF-DIEKVAKLAHAKGAKVIVDNTFYS--PIYQRPIELGADIVL 192 (364)
T ss_pred ----cCCHHHHHHhcC---cCceEEEEECCCCCCCeee-CHHHHHHHHHHcCCEEEEECCCcc--cccCCchhhCCcEEE
Confidence 258999999997 789999999995 688877 899999999999999999998432 224567778999999
Q ss_pred eCCccccccCCCCCCCceeEEEEeC-CCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001531 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~G~i~~~~-~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1058)
.|+||+++.+ |.--.|+|++++ ++...+. .. + ...+ .+.++ . -+++...|-+-
T Consensus 193 ~S~tK~l~g~---~d~~gG~v~~~~~~l~~~~~-~~-----------~-~~~G-~~~s~----~-----~a~l~~~~L~t 246 (364)
T PRK07269 193 HSATKYLSGH---NDVLAGVVVTNDLELYEKLF-YN-----------L-NTTG-AVLSP----F-----DSYLLMRGLKT 246 (364)
T ss_pred ecCceeccCC---CcccceEEEeCcHHHHHHHH-HH-----------H-HHhC-CCCCH----H-----HHHHHHcCCCc
Confidence 9999998522 111256777754 3433221 00 0 0011 11111 1 23455556666
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCeeecc
Q 001531 868 LTEASKIAILNANYMAKRLEKH---YPILFRG 896 (1058)
Q Consensus 868 l~~~a~~~~~~a~yL~~~L~~~---~~v~~~g 896 (1058)
+..+.++..+++.++++.|+++ ..+.|+|
T Consensus 247 L~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg 278 (364)
T PRK07269 247 LSLRMERSTANAQEVVAFLKKSPAVKEVLYTG 278 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEeCCC
Confidence 7778888899999999999975 3455665
No 493
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.43 E-value=1.5e-11 Score=142.36 Aligned_cols=283 Identities=15% Similarity=0.133 Sum_probs=167.6
Q ss_pred hhcHHHHHHHHHHHHHHHhCCC---ceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccHHHHHhCCcE
Q 001531 627 AQGYQEMFNNLGEWLCTITGFD---SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1058)
Q Consensus 627 ~qG~~~~~~el~~~lael~G~~---~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~pa~a~~~G~~ 703 (1058)
.+|..++..++.+++.+..|.+ ...+..++|++.. +.++++.+.. ++++.|++++..|..+...+...|.+
T Consensus 55 ~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~--i~~~~~~l~~----~~gd~Vl~~~p~y~~~~~~~~~~g~~ 128 (357)
T TIGR03539 55 TWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKEL--VAWLPTLLGL----GPGDTVVIPELAYPTYEVGALLAGAT 128 (357)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHH--HHHHHHHHcC----CCCCEEEECCCCcHHHHHHHHhcCCE
Confidence 3577777777788887776654 3456666665432 2233333211 25688999988776666667789999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--ccHHHHHHHHHHcCCEEEEeccCcc-cccC----
Q 001531 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG---- 775 (1058)
Q Consensus 704 vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~G~i~--~dI~eI~~lah~~g~lv~vD~a~~~-al~g---- 775 (1058)
++.++ |++. ++ .+++++|++++| |.+|..- +.+++|+++|+++|+++++|+++.. ...+
T Consensus 129 ~~~v~-------~~~~----l~--~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~ 195 (357)
T TIGR03539 129 PVAAD-------DPTE----LD--PVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVS 195 (357)
T ss_pred EeccC-------Chhh----cC--ccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCcc
Confidence 88774 2232 22 257889999998 4788865 2588899999999999999998631 1111
Q ss_pred cCCC----CccCCcEEEeCCccccccCCCCCCCceeEEEEeCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHH
Q 001531 776 LTSP----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1058)
Q Consensus 776 l~~p----g~~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~ 851 (1058)
...| +...--|++.+++|.|+. .|.++|++.+++++...+... + .....+.+..++..
T Consensus 196 ~~~~~~~~~~~~~vi~~~S~SK~~~~----~G~R~G~~i~~~~~~~~~~~~------------~--~~~~~~~~~~~q~~ 257 (357)
T TIGR03539 196 ILDPRVCGGDHTGLLAVHSLSKRSNL----AGYRAGFVAGDPALVAELLTV------------R--KHAGLMVPAPVQAA 257 (357)
T ss_pred ceecccCCCccccEEEEeccccccCC----CceeEEEEecCHHHHHHHHHH------------H--hhcccCCCHHHHHH
Confidence 0011 111112667788888753 478899999877665443110 0 00111211112211
Q ss_pred HHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccccCCCCHHHHHHHHHHC
Q 001531 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (1058)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~~~g~~~~~v~k~L~~~ 930 (1058)
+..++. ..+.+++..+...++.+++.+.|++. +.+. .+++.++ ++++.. .+..++.+.|.++
T Consensus 258 ----~~~~l~--~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~--~p~~~~~--~~~~~~-------~~~~~~~~~l~~~ 320 (357)
T TIGR03539 258 ----MVAALG--DDGHVAEQKARYAARRAQLKPALEKAGFRID--HSEAGLY--LWATRG-------EDAWDTVDRLAEL 320 (357)
T ss_pred ----HHHHcC--CHHHHHHHHHHHHHHHHHHHHHHHHcCCCCc--CCCccEE--EEEECC-------CCHHHHHHHHHhC
Confidence 112221 12334444444556777888888774 3322 2223221 334432 2567899999999
Q ss_pred CccccCC-CCC--CCCEEEEEcCCCCCHHHHHHHHHHH
Q 001531 931 GFHGPTM-SWP--VPGTLMIEPTESESKEELDRYCDAL 965 (1058)
Q Consensus 931 Gi~~~~~-~~p--~~~~Lris~te~~t~eeid~fi~aL 965 (1058)
||.+... .|. ..+.+||++.. +++++++.++.|
T Consensus 321 gV~v~pg~~f~~~~~~~iRis~~~--~~~~i~~~~~~l 356 (357)
T TIGR03539 321 GILVAPGDFYGPAGSQHVRVALTA--TDERIAAAVARL 356 (357)
T ss_pred CEEECCccccCCCCCCeEEEEecC--CHHHHHHHHHhh
Confidence 9986432 232 24789999964 578888887765
No 494
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.43 E-value=7.4e-11 Score=136.18 Aligned_cols=264 Identities=14% Similarity=0.171 Sum_probs=170.9
Q ss_pred HHHHHHhc----CC--CCc-ceEeecchHHHHHHHHHHhccccCCC---CEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 001531 217 QTMIADLT----GL--PMS-NASLLDEGTAAAEAMAMCNNIQKGKK---KTFIIASNCHPQTIDICITRADGFDIKVVVS 286 (1058)
Q Consensus 217 q~~ia~L~----G~--~~a-nasl~~~~Taa~ea~~~a~~~~~~~g---d~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v 286 (1058)
++.+++.+ |. ++. ++.+.+|++.++..+++++. ++| |+|+++.-.|+.+...++ ..|++++.+
T Consensus 42 r~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~---~~g~~~d~Vl~~~p~y~~~~~~~~----~~g~~~~~v 114 (350)
T TIGR03537 42 REAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFI---DPEEDRRRVIFGTPGYPVYERGAL----FAGGEPTAV 114 (350)
T ss_pred HHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHc---CCCCCCceEEEcCCCCcchHHHHH----hcCCEEEEc
Confidence 34555543 64 454 78888888888777766653 244 799999999998888764 358888776
Q ss_pred Cc----------hhhhc-cCCCEeEEEEEcC-CCceeecc---HHHHHHHHHhcCcEEEEEeccccccCCC-CC---Ccc
Q 001531 287 DL----------KDIDY-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTILK-PP---GEL 347 (1058)
Q Consensus 287 ~~----------~~l~~-l~~~t~~V~v~~p-n~~G~i~d---l~~I~~~a~~~galliV~a~~~slg~l~-~p---~~~ 347 (1058)
+. +++++ +.++++++++.+| |.+|.+.+ +++|+++|+++|+++++|. ..+..... ++ ..+
T Consensus 115 ~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De-~y~~~~~~~~~~~~~~~ 193 (350)
T TIGR03537 115 KLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDE-CYTEIYFGEPPHSALEV 193 (350)
T ss_pred ccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEec-cccccccCCCCCchhhc
Confidence 54 23444 5668899999988 79999887 8999999999999999943 33211111 11 122
Q ss_pred cce--EEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchh
Q 001531 348 GAD--IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQ 424 (1058)
Q Consensus 348 GaD--ivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~ 424 (1058)
+.| |+++|. |.||.| |=-+|++..++++.+.+- +-+...+++++.
T Consensus 194 ~~~~~i~~~s~SK~~g~~----GlRiG~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~ 241 (350)
T TIGR03537 194 GIENVLAFHSLSKRSGMT----GYRSGFVAGDEKLISFLR----------------------------KLRANFGVASPD 241 (350)
T ss_pred CcCCEEEEeecccccCCc----cccceeeecCHHHHHHHH----------------------------HHHHhhccCCCH
Confidence 333 667775 877643 123578877666655441 001112333322
Q ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEecCC---HHHHHHHHHHcCcee
Q 001531 425 ALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCAD---AHAIASAAYKIEMNL 499 (1058)
Q Consensus 425 ~l~a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~--~~~~~v~i~~~~---~~~l~~~L~~~GI~~ 499 (1058)
.....+.+ .+...+.++++.+++.++.+++.+.|++.| +++..+ .+| +-++++. ..++.+.|.++||.+
T Consensus 242 ~~q~~~~~---~l~~~~~~~~~r~~l~~~~~~~~~~l~~~g-~~~~~~~g~~~--~~~~~~~~~~~~~l~~~L~~~gv~v 315 (350)
T TIGR03537 242 FVQAAAKA---AWSDDNHVLERRKIFKRKRDLFIEFFNKVG-LEYLYPDATFY--LWVKVPSGIDAKDYALRLLENGIVV 315 (350)
T ss_pred HHHHHHHH---HhCCcHHHHHHHHHHHHHHHHHHHHHHHCC-CcccCCCeEEE--EEEECCCCCCHHHHHHHHHHCCEEE
Confidence 11111111 233345567788888888999999999887 765532 122 2244443 788999999999987
Q ss_pred eec------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001531 500 RVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 500 ~~~------~~~~lris~~~~~t~edid~ll~al~ 528 (1058)
... .++++|+++. .+.+++++.++.|+
T Consensus 316 ~~g~~f~~~~~~~~Ri~~~--~~~~~~~~~l~~~~ 348 (350)
T TIGR03537 316 APGENFGSGEEGYVRVALV--PTLEECEEALRLWE 348 (350)
T ss_pred cCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHh
Confidence 531 1478999985 57889988888775
No 495
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.42 E-value=3e-11 Score=126.98 Aligned_cols=277 Identities=20% Similarity=0.228 Sum_probs=180.3
Q ss_pred HHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---
Q 001531 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--- 288 (1058)
Q Consensus 212 ~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~--- 288 (1058)
.|..|-..+++++|||. +-.+.|+-.+-.|++.++. ++||-|+++.++|-++.-. |++.|+++..+|-
T Consensus 62 pI~~F~~dlaeFlg~D~--~R~t~GARe~KfavMhal~---~~gd~vV~D~~aHYttyvA----AEragl~v~eVp~tg~ 132 (382)
T COG1103 62 PIKDFLEDLAEFLGMDE--VRVTAGAREAKFAVMHALC---KEGDWVVVDSLAHYTTYVA----AERAGLNVAEVPNTGY 132 (382)
T ss_pred cHHHHHHHHHHHhCCce--eeecccchhhHHHHHHHhc---cCCCEEEEcCcchHHHHHH----HHhcCCeEEecCCCCC
Confidence 35567778999999998 6677888877777777774 3799999999999776655 4567899988763
Q ss_pred -------hh----hhc-c---CCCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEE-EeccccccCCC-CCCcccce
Q 001531 289 -------KD----IDY-K---SGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVM-ATDLLALTILK-PPGELGAD 350 (1058)
Q Consensus 289 -------~~----l~~-l---~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV-~a~~~slg~l~-~p~~~GaD 350 (1058)
+. +++ . .+...+.++++| ..+|.+.|.+.++++||++|+++++ ++ .+.|-++ +..+.|+|
T Consensus 133 Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~A--Yt~Grmpvs~ke~g~D 210 (382)
T COG1103 133 PEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCA--YTVGRMPVSGKEIGAD 210 (382)
T ss_pred CceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecc--eeeccccccccccCCC
Confidence 11 222 1 134677788998 4799999999999999999999999 43 3555443 44689999
Q ss_pred EEEecC-cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccch--hHHH
Q 001531 351 IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTA--QALL 427 (1058)
Q Consensus 351 ivvgs~-k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~--~~l~ 427 (1058)
++|+|+ |++.. .|| .|+|+.++++.+.+- |.- |+. |. ..|- .---||. .++.
T Consensus 211 FiVgSGHKsmAA----s~P-iGvl~~~eE~ae~V~-r~S-------g~~-~~----------~KEv-ellGCT~rGapiv 265 (382)
T COG1103 211 FIVGSGHKSMAA----SAP-IGVLAMSEEWAEIVL-RRS-------GRA-FP----------KKEV-ELLGCTVRGAPIV 265 (382)
T ss_pred EEEecCccchhc----cCC-eeEEeehhHHHHHHH-hhc-------ccc-cc----------ccee-eeecccccCchHH
Confidence 999999 87753 233 589999998765431 100 110 00 0000 0122444 3455
Q ss_pred HHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcC-CCCc-cEEEEecCCHHHHHHHHHHcCceeee----
Q 001531 428 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LPFF-DTVKVKCADAHAIASAAYKIEMNLRV---- 501 (1058)
Q Consensus 428 a~~Aa~yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~-~~~~-~~v~i~~~~~~~l~~~L~~~GI~~~~---- 501 (1058)
.+||++= .. .+-. +.+....++|+++.+.|+++||++.++ .|.- +-+.|..+.-.+|++.-.++|+++..
T Consensus 266 TlmASfP--~V-~eRV-krWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~ 341 (382)
T COG1103 266 TLMASFP--HV-VERV-KRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKK 341 (382)
T ss_pred HHHhcCH--HH-HHHH-HHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHHHh
Confidence 6677651 10 1112 223445689999999999998788775 3433 33445555445565555555554411
Q ss_pred -----ccC---CeEEEEeccCCCHHHHHHHHHHHhC
Q 001531 502 -----VDS---NTVTASFDETTTLEDVDKLFIVFAG 529 (1058)
Q Consensus 502 -----~~~---~~lris~~~~~t~edid~ll~al~~ 529 (1058)
+.+ ..+-+| ...-++|+++..+++|..
T Consensus 342 RgI~GI~~G~Tk~~K~s-vyGl~~Eqve~V~~afke 376 (382)
T COG1103 342 RGIHGIQPGQTKYFKLS-VYGLSWEQVEYVVDAFKE 376 (382)
T ss_pred cCccccccCceeEEEEE-eecCCHHHHHHHHHHHHH
Confidence 011 234444 345689999999999863
No 496
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.42 E-value=1.3e-11 Score=143.38 Aligned_cols=209 Identities=19% Similarity=0.181 Sum_probs=140.7
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCccH----HHHHhCCcEEEEEcC
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMKIVSVGT 709 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg~~p----a~a~~~G~~vv~V~~ 709 (1058)
..++++.++++.|.+.+ +..++|.++.. .++++ . .++++||++...++... ..+...|++++.++.
T Consensus 54 ~~~le~~la~l~g~~~~-~~~~sG~~ai~-~~~~l---l-----~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 123 (366)
T PRK08247 54 RGVLEQAIADLEGGDQG-FACSSGMAAIQ-LVMSL---F-----RSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNT 123 (366)
T ss_pred HHHHHHHHHHHhCCCcE-EEEcCHHHHHH-HHHHH---h-----CCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECC
Confidence 45789999999999875 56667766553 22221 1 24578998876665422 234568999999886
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CcccccccHHHHHHHHHHcCCEEEEeccCcccccCcCCCCccCCcEEE
Q 001531 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1058)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~G~i~~dI~eI~~lah~~g~lv~vD~a~~~al~gl~~pg~~GaDi~~ 788 (1058)
.|+++++++++ ++|++|++++|+ .+|... |+++|+++||++|+++++|+++... .+..|.+.|+|+++
T Consensus 124 -----~d~~~l~~~i~---~~tklv~le~P~NP~~~~~-dl~~I~~la~~~g~~lIvD~t~~~~--~~~~p~~~g~di~i 192 (366)
T PRK08247 124 -----ASLKAIEQAIT---PNTKAIFIETPTNPLMQET-DIAAIAKIAKKHGLLLIVDNTFYTP--VLQRPLEEGADIVI 192 (366)
T ss_pred -----CCHHHHHHhcc---cCceEEEEECCCCCCCcHH-HHHHHHHHHHHcCCEEEEECCCccc--cccCchhcCCcEEE
Confidence 48999999996 789999999995 677776 8999999999999999999986422 23456678999999
Q ss_pred eCCccccccCCCCCCCceeEEEEe-CCCCCCCCCCCcccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001531 789 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1058)
Q Consensus 789 ~s~hKtf~~P~g~GGPg~G~i~~~-~~l~~~lpg~~vg~~~d~g~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1058)
.+++|+++. .++-.+|++.++ +.+...+... + ...+ .+.+++ .+| +...+-+-
T Consensus 193 ~S~sK~~~g---~~d~~~G~iv~~~~~l~~~~~~~------------~-~~~g-~~~s~~-------~a~--l~~~~l~t 246 (366)
T PRK08247 193 HSATKYLGG---HNDVLAGLVVAKGQELCERLAYY------------Q-NAAG-AVLSPF-------DSW--LLIRGMKT 246 (366)
T ss_pred eecceeccC---CCceeeeEEecChHHHHHHHHHH------------H-HhcC-CCCChH-------HHH--HHHhccCc
Confidence 999999851 122346778776 3443322100 0 0001 111111 122 22334444
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 001531 868 LTEASKIAILNANYMAKRLEKH 889 (1058)
Q Consensus 868 l~~~a~~~~~~a~yL~~~L~~~ 889 (1058)
+....++..+++..+++.|+++
T Consensus 247 l~~r~~~~~~~a~~l~~~L~~~ 268 (366)
T PRK08247 247 LALRMRQHEENAKAIAAFLNEQ 268 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC
Confidence 5556666788999999999986
No 497
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.42 E-value=1.7e-11 Score=141.97 Aligned_cols=315 Identities=17% Similarity=0.193 Sum_probs=189.2
Q ss_pred HHHHHHHHHHHhCCCceeeecCchHHHHHHHHHHHHHHHHHcCCCCCCEEEEcCCCCC-ccHHHHHhCCcEEEEEcCC--
Q 001531 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHG-TNPATAAMCGMKIVSVGTD-- 710 (1058)
Q Consensus 634 ~~el~~~lael~G~~~~~l~~~sGa~ge~a~llair~y~~~~G~~~r~~Vlip~saHg-~~pa~a~~~G~~vv~V~~d-- 710 (1058)
+.++++.+++++|++.+ +.+++|+.|+. .+. .. +.+++++| |.+.|. +..+.....|...+.++.+
T Consensus 73 ~~~lE~~va~~~G~~~a-v~v~sGT~Al~-ll~--~l-----~l~pGDeV--psn~~f~Tt~ahIe~~Gav~vDi~~dea 141 (450)
T TIGR02618 73 FYHLERTVRELYGFKYV-VPTHQGRGAEN-LLS--QI-----AIKPGDYV--PGNMYFTTTRYHQEKNGATFVDIIIDEA 141 (450)
T ss_pred HHHHHHHHHHHHCCCeE-EEcCCHHHHHH-HHH--Hh-----CCCCcCEE--CCceeHHHHHHHHHhCCeEEEeeecccc
Confidence 55889999999999975 56677887763 222 11 12356755 545442 2223356788876666443
Q ss_pred --------CCCCCCHHHHHHHHHhcC-CCeEEEEEEcCC-Cc-cccc--ccHHHHHHHHHHcCCEEEEeccCcc--ccc-
Q 001531 711 --------AKGNINIEELRKAAEANR-DNLSTLMVTYPS-TH-GVYE--EGIDEICKIIHDNGGQVYMDGANMN--AQV- 774 (1058)
Q Consensus 711 --------~~g~iD~e~L~~~i~~~~-~~taaV~vt~Pn-~~-G~i~--~dI~eI~~lah~~g~lv~vD~a~~~--al~- 774 (1058)
.+|.+|+++|+++|+... +++++|.+++++ .. |..- .++++|.++|++||+.||.|+|+.. +..
T Consensus 142 ~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I 221 (450)
T TIGR02618 142 HDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFI 221 (450)
T ss_pred cccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhh
Confidence 248999999999997422 255567777664 34 5551 3799999999999999999999864 331
Q ss_pred -----Cc-CCCC-----c--cCCcEEEeCCccccccCCCCCCCceeEEEEeC-CCCCCCCCCCcccCCCCCCCCCCCCCC
Q 001531 775 -----GL-TSPG-----Y--IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLG 840 (1058)
Q Consensus 775 -----gl-~~pg-----~--~GaDi~~~s~hKtf~~P~g~GGPg~G~i~~~~-~l~~~lpg~~vg~~~d~g~~~~~~~t~ 840 (1058)
|. ..+- + -.+|.|++|+||+++.| -+|+|++++ ++..++....+ ..+
T Consensus 222 ~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~------~GG~l~~~d~~l~~k~r~~~~-------------~~e 282 (450)
T TIGR02618 222 KEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVN------IGGFLCMNDDEMFQSAKELVV-------------VFE 282 (450)
T ss_pred hcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCC------CceEEEeCCHHHHHHHHHHhh-------------hcC
Confidence 11 1111 1 26899999999998644 457888764 44433211100 001
Q ss_pred CCCccchhhH--HHHHHHHHHHHHHchhhHH-HHHHHHHHHHHHHHHHHhcc-CCeeeccCCCccceEEEEecccccc--
Q 001531 841 TIAAAPWGSA--LILPISYTYIAMMGSKGLT-EASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKN-- 914 (1058)
Q Consensus 841 ~i~sa~~g~~--~~~~~a~a~l~~lG~eGl~-~~a~~~~~~a~yL~~~L~~~-~~v~~~g~~~~~~~e~vv~~~~~~~-- 914 (1058)
...+ ..|.+ .+.+.+.+ +. +.+. ....+.+.+++||.++|.+. +++.. +.+ -|.+.+|...+..
T Consensus 283 G~~t-yGgla~r~~~ala~g-L~----e~~~~~y~~~r~~~a~~La~~L~~~Gvpv~~--p~g--gh~V~vda~~~lph~ 352 (450)
T TIGR02618 283 GMPS-YGGLAGRDMEAMAIG-IR----EAVDYEYIEHRVKQVRYLGDKLKAAGVPIVE--PVG--GHAVFLDARRFLPHI 352 (450)
T ss_pred Cccc-cCchhhhhHHHHHHH-HH----HhhhHHHHHHHHHHHHHHHHHHHHCCCcccC--CCC--cceEEEEhHHhCCCC
Confidence 1110 00111 11111111 11 2222 23455567799999999886 55532 222 3677888765421
Q ss_pred -cCCCCHHHHHHHHH-HCCccc---cCCC---CC--------CCCEEEEEcCC-CCCHHHHHHHHHHHHHHHHHHHHHhc
Q 001531 915 -TAGIEPEDVAKRLM-DYGFHG---PTMS---WP--------VPGTLMIEPTE-SESKEELDRYCDALISIREEIAQIEN 977 (1058)
Q Consensus 915 -~~g~~~~~v~k~L~-~~Gi~~---~~~~---~p--------~~~~Lris~te-~~t~eeid~fi~aL~~i~~e~~~~~~ 977 (1058)
.....+..++-.|. +.||-. +++. .| .-..+|+.++- .-|.+.+|..++++..+.+....|.-
T Consensus 353 ~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~~~~g 432 (450)
T TIGR02618 353 PQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHRDDIRG 432 (450)
T ss_pred ChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhhHhhcCc
Confidence 11235667777776 567653 3332 12 12568888776 55789999999999999988777642
Q ss_pred CCCCCCCcccc
Q 001531 978 GKADIHNNVLK 988 (1058)
Q Consensus 978 ~~~~~~~~~~~ 988 (1058)
=++..+|..|+
T Consensus 433 ~~~~~ep~~lr 443 (450)
T TIGR02618 433 LKMVYEPKQLR 443 (450)
T ss_pred eEEeecchhhh
Confidence 23444555544
No 498
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.42 E-value=1.5e-11 Score=142.75 Aligned_cols=281 Identities=17% Similarity=0.168 Sum_probs=178.4
Q ss_pred HHHHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch--
Q 001531 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-- 289 (1058)
Q Consensus 212 ~l~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~-- 289 (1058)
.+.+|++.+++++|.+. +..+++||+|..+++.++.+. +||+|+++...++++..++.. .|.+++.+|++
T Consensus 26 ~~~~fE~~~a~~~g~~~--~~~~~sgt~Al~~al~~l~~~--~gdeVi~p~~t~~~~~~ai~~----~G~~pv~~Di~~~ 97 (363)
T PF01041_consen 26 YVEEFEKEFAEYFGVKY--AVAVSSGTSALHLALRALGLG--PGDEVIVPAYTFPATASAILW----AGAEPVFVDIDPE 97 (363)
T ss_dssp HHHHHHHHHHHHHTSSE--EEEESSHHHHHHHHHHHTTGG--TTSEEEEESSS-THHHHHHHH----TT-EEEEE-BETT
T ss_pred HHHHHHHHHHHHhCCCe--EEEeCChhHHHHHHHHhcCCC--cCceEecCCCcchHHHHHHHH----hccEEEEEeccCC
Confidence 45568899999999665 889999999999999998764 899999999999999998754 59999998864
Q ss_pred -------hhhc-cCCCEeEEEEEcCCCceeeccHHHHHHHHHhcCcEEEEEeccccccCC---CCCCcccceEEEecC--
Q 001531 290 -------DIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL---KPPGELGADIVVGSA-- 356 (1058)
Q Consensus 290 -------~l~~-l~~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l---~~p~~~GaDivvgs~-- 356 (1058)
++++ ++++|++|++++ ++|...|+++|.++|+++|+.+|-|+ .+++|.. +..|.+| |+.++|.
T Consensus 98 ~~~id~~~~~~~i~~~t~ai~~~h--~~G~~~d~~~i~~~~~~~~i~lIeD~-a~a~g~~~~g~~~G~~g-d~~~fSf~~ 173 (363)
T PF01041_consen 98 TLNIDPEALEKAITPKTKAILVVH--LFGNPADMDAIRAIARKHGIPLIEDA-AQAFGARYKGRPVGSFG-DIAIFSFHP 173 (363)
T ss_dssp TSSB-HHHHHHHHHTTEEEEEEE---GGGB---HHHHHHHHHHTT-EEEEE--TTTTT-EETTEETTSSS-SEEEEESST
T ss_pred cCCcCHHHHHHHhccCccEEEEec--CCCCcccHHHHHHHHHHcCCcEEEcc-ccccCceeCCEeccCCC-CceEecCCC
Confidence 4555 788999999987 89999999999999999999999854 4566642 2346777 9999996
Q ss_pred -cccccccCCCCCceEEEEEeh-hhhhcCCC-cEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHH
Q 001531 357 -QRFGVPMGYGGPHAAFLATSQ-EYKRMMPG-RIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1058)
Q Consensus 357 -k~lg~P~~~GGP~~G~l~~~~-~~~~~lpg-rivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~ 433 (1058)
|.+. .| .+|++.+++ ++.+++.- |-.|...+ ..++......+..+.-+.-+.|++
T Consensus 174 ~K~i~----~g--eGG~v~~~~~~~~~~~~~~~~~g~~~~----------------~~~~~~~~~~~g~n~rm~~~~AAi 231 (363)
T PF01041_consen 174 TKIIT----TG--EGGAVVTNDPELAERARALRNHGRSRD----------------AFRRYRHELPPGYNFRMSELQAAI 231 (363)
T ss_dssp TSSS-----SS--S-EEEEESTHHHHHHHHHHTBTTEETS----------------ECSTTEESSSS--B-B-BHHHHHH
T ss_pred CCCCc----CC--CCeeEEecHHHHHHHhhhhhccCcCcc----------------ccccccccccCCcccccHHHHHHH
Confidence 4442 22 247888875 33333210 00111100 000000000010111111223333
Q ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC-C-----CccEEEEecCC-----HHHHHHHHHHcCceeeec
Q 001531 434 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-P-----FFDTVKVKCAD-----AHAIASAAYKIEMNLRVV 502 (1058)
Q Consensus 434 yl~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~-~-----~~~~v~i~~~~-----~~~l~~~L~~~GI~~~~~ 502 (1058)
-+..+ +-++++.++-.+++.++.+.|.++.++..... + ....+.+.+++ -.++.+.|.++||..+..
T Consensus 232 gl~QL--~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l~~~L~~~GI~~~~~ 309 (363)
T PF01041_consen 232 GLAQL--KRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEALADRDELVEALRARGIETRPH 309 (363)
T ss_dssp HHHHH--HTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGCSTHHHHHHHHHHTTBEEBCS
T ss_pred HHHHH--HHhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccccccchHHHHHHHHHHCCCccccc
Confidence 22222 23566667777899999999999865755421 1 11234454442 678999999999965321
Q ss_pred c----------------------------CCeEEEEeccCCCHHHHHHHHHHHh
Q 001531 503 D----------------------------SNTVTASFDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 503 ~----------------------------~~~lris~~~~~t~edid~ll~al~ 528 (1058)
. ...+.+-++..-+.+|+++++++|+
T Consensus 310 ~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 310 YPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp TSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred ccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 0 1347777888889999999998874
No 499
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.42 E-value=1.1e-10 Score=134.67 Aligned_cols=263 Identities=16% Similarity=0.125 Sum_probs=171.6
Q ss_pred HHHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch----
Q 001531 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---- 289 (1058)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~~~---- 289 (1058)
.++++.+|++++.++.++.+.+|+++++..++.++ . ++||+|+++.-.++.+...+ +..|.+++.++.+
T Consensus 62 ~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l-~--~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~ 134 (351)
T PRK14807 62 EKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAF-I--NKGDVVIYPHPSFAMYSVYS----KIAGAVEIPVKLKEDYT 134 (351)
T ss_pred HHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHh-c--CCCCEEEEeCCChHHHHHHH----HHcCCeEEEeecCCCCC
Confidence 45678999999998888988888887776666555 2 37999999988887655543 3467887776542
Q ss_pred ----hhhc-cC-CCEeEEEEEcC-CCceeeccHHHHHHHHHhcCcEEEEEeccccccCCCC-----CCcccceEEEecC-
Q 001531 290 ----DIDY-KS-GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP-----PGELGADIVVGSA- 356 (1058)
Q Consensus 290 ----~l~~-l~-~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~slg~l~~-----p~~~GaDivvgs~- 356 (1058)
++++ ++ .++++|++.+| |.+|.+.+.+++.+++++++.+++++ +... .+... .....--|+++|.
T Consensus 135 ~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivD-e~y~-~~~~~~~~~~~~~~~~vi~~~S~S 212 (351)
T PRK14807 135 YDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVD-EAYF-EFYGNTIVDVINEFENLIVLRTLS 212 (351)
T ss_pred CCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEe-Ccch-hhcccchHHHhhhCCCEEEEecch
Confidence 3444 54 37899999988 69999999999999999988888774 3321 11111 1122234777776
Q ss_pred cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHH
Q 001531 357 QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAV 436 (1058)
Q Consensus 357 k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~ 436 (1058)
|.|+.| |=-+|++...+++.+.+- +.+...+++ . + +..++. .
T Consensus 213 K~~~~~----GlRiG~~v~~~~~~~~~~----------------------------~~~~~~~~~--~-~-~q~~~~--~ 254 (351)
T PRK14807 213 KAFGLA----GLRVGYAVANENILKYLN----------------------------LVKSPYNIN--S-L-SQVIAL--K 254 (351)
T ss_pred Hhcccc----hhceeeeecCHHHHHHHH----------------------------HccCCCCcC--H-H-HHHHHH--H
Confidence 888654 234688887777665541 000111111 1 1 111111 1
Q ss_pred HhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC-CCccEEEEecCCHHHHHHHHHHcCceeeecc-----CCeEEEE
Q 001531 437 YHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCADAHAIASAAYKIEMNLRVVD-----SNTVTAS 510 (1058)
Q Consensus 437 ~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~-~~~~~v~i~~~~~~~l~~~L~~~GI~~~~~~-----~~~lris 510 (1058)
++....+++..++..++.+++.+.|+++.|+++... ..| +.+.+++..++.+.|.++||.++... ++.+|++
T Consensus 255 ~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~--~~i~~~~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis 332 (351)
T PRK14807 255 VLRTGVLKERVNYILNERERLIKELSKIPGIKVYPSKTNF--ILVKFKDADYVYQGLLERGILVRDFSKVEGLEGALRIT 332 (351)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECcCCccE--EEEEcCCHHHHHHHHHHCCEEEEECCCCCCCCCeEEEE
Confidence 121223555566667777888889987733776532 222 33555557788999999999886532 3689999
Q ss_pred eccCCCHHHHHHHHHHHh
Q 001531 511 FDETTTLEDVDKLFIVFA 528 (1058)
Q Consensus 511 ~~~~~t~edid~ll~al~ 528 (1058)
+. +.++.++|+++|.
T Consensus 333 ~~---~~~~~~~l~~~l~ 347 (351)
T PRK14807 333 VS---SCEANDYLINGLK 347 (351)
T ss_pred cC---CHHHHHHHHHHHH
Confidence 87 6788889988874
No 500
>PRK07049 methionine gamma-lyase; Validated
Probab=99.42 E-value=3.4e-11 Score=142.23 Aligned_cols=211 Identities=17% Similarity=0.125 Sum_probs=146.8
Q ss_pred HHHHHHHHhcCCCCcceEeecchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC----chh
Q 001531 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD----LKD 290 (1058)
Q Consensus 215 e~q~~ia~L~G~~~anasl~~~~Taa~ea~~~a~~~~~~~gd~Vlv~~~~Hps~~~~~~~~a~~~gi~v~~v~----~~~ 290 (1058)
.+++.+|++.|.+. +.++.+|++++.++++++. ++||+|+++...++.+...+...++..|++++.++ .++
T Consensus 87 ~Le~~lA~leg~~~--~iv~~sG~~Ai~~~l~al~---~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~~d~~~ 161 (427)
T PRK07049 87 IVEDRLAVYEGAES--AALFSSGMSAIATTLLAFV---RPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADGLSEAA 161 (427)
T ss_pred HHHHHHHHHhCCCc--EEEEccHHHHHHHHHHHHh---CCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCCCCHHH
Confidence 45689999999774 7789999988877777663 37999999999999888776655567899855442 334
Q ss_pred hhc-c-----CCCEeEEEEEcC-CCceeeccHHHHHHHHHh------cCcEEEEEeccccccCCCCCCcccceEEEecC-
Q 001531 291 IDY-K-----SGDVCGVLVQYP-GTEGEVLDYGDFIKNAHA------NGVKVVMATDLLALTILKPPGELGADIVVGSA- 356 (1058)
Q Consensus 291 l~~-l-----~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~------~galliV~a~~~slg~l~~p~~~GaDivvgs~- 356 (1058)
+++ + .+++++|++.+| |++|.+.|+++|.++++. +|++++|| +...-.+...|.++|+||++.|.
T Consensus 162 l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvD-ety~~~~~~~pl~~g~divv~S~S 240 (427)
T PRK07049 162 IGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACD-NTLLGPVFQKPLEHGADLSVYSLT 240 (427)
T ss_pred HHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEE-CCccccccCCccccCCCEEEEcCc
Confidence 543 3 257999999998 789999999999999998 78888884 44433344456688999999998
Q ss_pred cccccccCCCCCceEEEEEehhhhhcCCCcEEeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHH
Q 001531 357 QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAV 436 (1058)
Q Consensus 357 k~lg~P~~~GGP~~G~l~~~~~~~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni~t~~~l~a~~Aa~yl~ 436 (1058)
|.|++ .+|--+|++..++++.+.+- +.+...+.|. +...+ |+.
T Consensus 241 K~~gG---~~glr~G~vv~~~~l~~~l~----------------------------~~~~~~g~~l-s~~~a-----~l~ 283 (427)
T PRK07049 241 KYVGG---HSDLVAGAVLGRKALIRQVR----------------------------ALRSAIGTQL-DPHSC-----WML 283 (427)
T ss_pred eeecC---CCCcEEEEEECCHHHHHHHH----------------------------HHHHhcCCCC-CHHHH-----HHH
Confidence 98873 24456788887776655441 0000011111 11111 123
Q ss_pred HhCcccHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 001531 437 YHGPEGLKTIAQRVHGLAGTFALGLKKLGTVE 468 (1058)
Q Consensus 437 ~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~ 468 (1058)
..+-+-+....++..+++..+++.|++..+++
T Consensus 284 ~r~L~tl~~R~~~~~~~a~~la~~L~~~p~V~ 315 (427)
T PRK07049 284 GRSLETLVLRMERANRNARAVAEFLRDHPKVE 315 (427)
T ss_pred HcCCChHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 33444566666777899999999999875454
Done!