Query 001534
Match_columns 1058
No_of_seqs 911 out of 5280
Neff 10.8
Searched_HMMs 29240
Date Tue Mar 26 16:42:08 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001534.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_835-839//hhsearch_pdb/001534hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sfz_A APAF-1, apoptotic pepti 1.0 1 1 571.7 61.1 617 342-1042 611-1248(1249)
2 2ymu_A WD-40 repeat protein; u 1.0 1 1 555.3 76.3 562 341-1040 10-577 (577)
3 1nr0_A Actin interacting prote 1.0 1 1 537.5 75.3 535 339-1041 51-609 (611)
4 3sfz_A APAF-1, apoptotic pepti 1.0 1 1 525.1 57.5 563 311-1002 614-1247(1249)
5 2ymu_A WD-40 repeat protein; u 1.0 1 1 523.2 74.0 528 336-1001 46-577 (577)
6 1nr0_A Actin interacting prote 1.0 1 1 505.2 67.4 557 243-1003 20-610 (611)
7 1pgu_A Actin interacting prote 1.0 1 1 500.5 67.7 554 345-1043 17-614 (615)
8 2oaj_A Protein SNI1; WD40 repe 1.0 1 1 488.9 65.2 634 340-1040 11-825 (902)
9 1pgu_A Actin interacting prote 1.0 1 1 478.4 61.2 527 338-1003 54-613 (615)
10 2oaj_A Protein SNI1; WD40 repe 1.0 1 1 461.8 63.9 566 404-1044 13-784 (902)
No 1
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=1.00 E-value=1 Score=571.74 Aligned_cols=617 Identities=15% Similarity=0.185 Sum_probs=488.9
Q ss_pred EECCCCCEEEEEEECCCCEEEEEEECCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
Q ss_conf 60289973699981599729999927882999983676533457512101333453210101367886738999889999
Q 001534 342 TLNQGSNVMSMDFHPQQQTILLVGTNVGDISLWEVGSRERLAHKPFKVWDISAASMPLQNALLNDAAISVNRCVWGPDGL 421 (1058)
Q Consensus 342 ~~~h~~~V~~~~fspdg~~lla~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~spd~~ 421 (1058)
...|.+.|++++|||+|+ ++++|+.||.|++||+.+++.+.. +.+|...|.+++|+|+++
T Consensus 611 ~~~h~~~v~~~~~s~~~~-~l~s~~~d~~i~vw~~~~~~~~~~-------------------~~~h~~~v~~~~~s~~~~ 670 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQ-RIASCGADKTLQVFKAETGEKLLD-------------------IKAHEDEVLCCAFSSDDS 670 (1249)
T ss_dssp ECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEEEE-------------------ECCCSSCEEEEEECTTSS
T ss_pred EECCCCCEEEEEECCCCC-EEEEEECCCEEEEEECCCCCEEEE-------------------ECCCCCCEEEEEEECCCC
T ss_conf 716666489999879999-899994889499999899978887-------------------606777789999926999
Q ss_pred EEEEEECCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCCEE
Q ss_conf 89999699959999805998200014530576786789994499936999982899399998578814687408889857
Q 001534 422 MLGVAFSKHIVHLYTYNPTGELRQHLEIDAHVGGVNDIAFAHPNKQLCIVTCGDDKMIKVWDVVAGRKQYTFEGHEAPVY 501 (1058)
Q Consensus 422 ~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~fs~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~ 501 (1058)
++++++.|+.|++||+.+++.+. .+.+|...|.+++|+|++...++++++.|+.|++||+.+++++..+.+|...|.
T Consensus 671 ~l~s~~~d~~v~vwd~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~ 747 (1249)
T 3sfz_A 671 YIATCSADKKVKIWDSATGKLVH---TYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVN 747 (1249)
T ss_dssp EEEEEETTSEEEEEETTTCCEEE---EEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEE
T ss_pred EEEEEECCCEEEEEECCCCCEEE---EECCCCCCEEEEEEECCCCCEEEEEEECCCEEEEEECCCCCHHHEECCCCCCEE
T ss_conf 89998189959998779993689---995899737999984089965999980897099998999634220127779788
Q ss_pred EEEECCCCCCCEEEEEECCCEEEEEECCCCCCEEEECCC-------------CCCEEEEEECCCCCEEEEEECCCCCCCE
Q ss_conf 997304689329999907990999967889814795089-------------9947999986899979997028789860
Q 001534 502 SVCPHHKESIQFIFSTAIDGKIKAWLYDYLGSRVDYDAP-------------GNWCTMMAYSADGTRLFSCGTSKEGESH 568 (1058)
Q Consensus 502 ~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------------~~~v~~i~~s~~~~~l~~~~~~~~~~~~ 568 (1058)
+++|+|+ +..+++++.||.|++||+.+......+... ...+.+++|+|+++.+++++ ++.
T Consensus 748 ~~~~sp~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-----~~~ 820 (1249)
T 3sfz_A 748 HCRFSPD--DELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-----KNK 820 (1249)
T ss_dssp EEEECSS--TTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-----TTE
T ss_pred EEEEECC--CCEEEEEECCCEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEC-----CCC
T ss_conf 9999259--998999978985999968888655302023210246776445650179999978998899975-----895
Q ss_pred EEEEECCCCCEEEEECCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEECCCCEEE
Q ss_conf 99964798814676417788763699985899999998389909999789991489991689999814699907999999
Q 001534 569 LVEWNESEGAIKRTYSGFRKRSLGVVQFDTTRNRFLAAGDEFQIKFWDMDNMNMLTTVDADGGLPASPRLRFNKEGSLLA 648 (1058)
Q Consensus 569 i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 648 (1058)
+.+|+..++.....+...+...+.+++|+|++..+++++.+|.|++|++.++.....+..|.. .|.+++|+|++..++
T Consensus 821 v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~--~v~~v~~spdg~~l~ 898 (1249)
T 3sfz_A 821 VLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLS--WVHGVMFSPDGSSFL 898 (1249)
T ss_dssp EEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSS--CEEEEEECTTSSEEE
T ss_pred EEEEEECCCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEECCCCCC--CEEEEEECCCCCEEE
T ss_conf 999995689723577478777607999827888899994798699998678956532278766--568999989999899
Q ss_pred EEECCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99789939999978974001002587334457999998999753344588765432247988999999998434545778
Q 001534 649 VTTSDNGIKILANSDGVRLLRMLEGRAMDKNRCPSEPISSKPLTINALGPASNVSAAIAPTLERPDRGPPAVSISSLGTI 728 (1058)
Q Consensus 649 ~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (1058)
+++.||.+++|+..+..................+.. ........ ......+...... ..........
T Consensus 899 s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~i~ 965 (1249)
T 3sfz_A 899 TASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENE------TMVLAVDN-IRGLQLIAGKTGQ------IDYLPEAQVS 965 (1249)
T ss_dssp EEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTE------EEEEEEES-SSSEEEEEESSCC------EEEECCSCEE
T ss_pred EEECCCEEEEEECCCCCEEEEECCCCEEEEEECCCC------CEEEEECC-CCCEEEEECCCCE------EEECCCCCEE
T ss_conf 995897289887466520102113310368975998------68998137-7624898447650------8972567278
Q ss_pred CCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCCC
Q ss_conf 876666776543334-4553221357767866303886389757676599999168745888312562899882567879
Q 001534 729 DGSRLVDVKPRVAED-VDKIKSWRIPDISDPSQIKALRLPDSIAASKVVRLIYTNSGLSLLALASNAVHKLWKWQRTERN 807 (1058)
Q Consensus 729 ~~~~~~~~~~~~~~~-~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~i~iw~~~~~~~~ 807 (1058)
...+++++..++++. ++.+.+|++...... . .+. +|...|.+++|+|+++.+++++.||.+++|++.++
T Consensus 966 ~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~---~--~~~--~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~--- 1035 (1249)
T 3sfz_A 966 CCCLSPHLEYVAFGDEDGAIKIIELPNNRVF---S--SGV--GHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTG--- 1035 (1249)
T ss_dssp EEEECTTSSEEEEEETTSCCEEEETTTTSCE---E--ECC--CCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTT---
T ss_pred EEEECCCCCEEEEECCCCCEEEEECCCCCEE---E--ECC--CCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCC---
T ss_conf 9999589977999869998899975787234---4--303--67771689999899998999869987999987999---
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCEEEEEECCCCEEEEEECCCCCCEEEE
Q ss_conf 88742234565003799987311466889999998459997169969999819939999877860899950798884899
Q 001534 808 PSGKATANVAPQLWQPPSGTLMTNDINESKPTEESAACIALSKNDSYVMSASGGKVSLFNMMTFKVMTMFMSPPPAATFL 887 (1058)
Q Consensus 808 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~h~~~~i~~i~~s~d~~~la~~sdg~i~iwd~~~~~~~~~~~~~~~~i~~l 887 (1058)
.... ... | ...+.++++++++.+++.+.|+.|++||+.+++....+.+|...|.++
T Consensus 1036 -------------------~~~~--~~~--~-~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~ 1091 (1249)
T 3sfz_A 1036 -------------------DYVF--LQA--H-QETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSC 1091 (1249)
T ss_dssp -------------------EEEC--CBC--C-SSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCE
T ss_pred -------------------CEEE--EEC--C-CCCEEEEEECCCCCEEEEECCCCEEEEECCCCCEEEEECCCCCCEEEE
T ss_conf -------------------6689--852--7-873899999089958999788968998889886558874668848999
Q ss_pred EEECCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCEE-EE-
Q ss_conf 9807999889998489709999931553678881777986899995899989999389919999689874001024-32-
Q 001534 888 AFHPQDNNIIAIGMEDSSVQIYNVRVDEVKTKLKGHQNRITGLAFSPTLNALVSSGADAQLCMWSIDKWEKLKSRF-IQ- 965 (1058)
Q Consensus 888 ~~s~~~~~~lasg~~dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spd~~~l~s~s~D~~i~iwd~~~~~~~~~~~-~~- 965 (1058)
+|+| +++++++++.||.|++||+.+++++..+.+|.+.|++++|+||+++|++++.||.|++|++.+++...... ..
T Consensus 1092 ~~s~-d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~ 1170 (1249)
T 3sfz_A 1092 AISS-DATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISV 1170 (1249)
T ss_dssp EECS-SSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-
T ss_pred EECC-CCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCC
T ss_conf 9989-999899984999489987898500125506877679999979999899982899799998899945788514444
Q ss_pred --CCCCCCCCCCCEEEEEECCCCCEEEEEECCEEEEEEC-CCCEEEEEEE--CCCCCEEECCCCCEEEEEECCCEEEEEC
Q ss_conf --5789899997803899968996999994991999918-9970158841--2101168712992999998898199972
Q 001534 966 --APAGRQSPLVGETKVQFHNDQTHLLVVHESQISVYDS-KLECSRSVSF--LSLCPYVFGVSSIFLLSTLTKLSVAVHD 1040 (1058)
Q Consensus 966 --~~~~~~~~~~~v~~~~fs~d~~~l~~~~d~~i~iwd~-~~~~~~~~~~--~~~~~~~~s~~~~~l~~~~~d~~v~v~~ 1040 (1058)
...+|. ..|.+++|+||+++++++. +.|++||+ +++.+..+.. ..+..+.|+++++++++++.|+.+.+|+
T Consensus 1171 ~~~~~~~~---~~v~~l~fs~dg~~l~s~~-g~v~vwd~~~g~~~~~~~~~~~~i~~~~~s~dg~~l~~~~~dg~v~vw~ 1246 (1249)
T 3sfz_A 1171 EEGTATHG---GWVTDVCFSPDSKTLVSAG-GYLKWWNVATGDSSQTFYTNGTNLKKIHVSPDFRTYVTVDNLGILYILQ 1246 (1249)
T ss_dssp ------CC---SCCCEEEECTTSSCEEEES-SSEEEBCSSSCBCCCCCCCSSCCCCCCEECSSSCCEEEECTTCCEEEEC
T ss_pred CCCCCCCC---CEEEEEEECCCCCEEEECC-CEEEEEECCCCCEEEEEECCCCCCCEEEECCCCCEEEEECCCCEEEEEE
T ss_conf 42102567---4289999978999899779-8599989888950046400477532799978987799966881799976
Q ss_pred CC
Q ss_conf 99
Q 001534 1041 PL 1042 (1058)
Q Consensus 1041 ~~ 1042 (1058)
+.
T Consensus 1247 l~ 1248 (1249)
T 3sfz_A 1247 VL 1248 (1249)
T ss_dssp CC
T ss_pred EC
T ss_conf 43
No 2
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=1.00 E-value=1 Score=555.26 Aligned_cols=562 Identities=21% Similarity=0.363 Sum_probs=472.0
Q ss_pred EEEC-CCCCEEEEEEECCCCEEEEEEECCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf 8602-899736999815997299999278829999836765334575121013334532101013678867389998899
Q 001534 341 RTLN-QGSNVMSMDFHPQQQTILLVGTNVGDISLWEVGSRERLAHKPFKVWDISAASMPLQNALLNDAAISVNRCVWGPD 419 (1058)
Q Consensus 341 ~~~~-h~~~V~~~~fspdg~~lla~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~spd 419 (1058)
..+. |.+.|+|++|||||+ ++|+|+.|+.|+|||. +++.+.. +.+|...|++++|+||
T Consensus 10 ~~L~GH~~~V~~~a~spdg~-~las~~~d~~v~iWd~-~~~~~~~-------------------l~gh~~~V~~l~fspd 68 (577)
T 2ymu_A 10 NRLEAHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNR-NGQLLQT-------------------LTGHSSSVWGVAFSPD 68 (577)
T ss_dssp EEECCCSSCEEEEEECTTSS-CEEEEETTSEEEEECT-TSCEEEE-------------------EECCSSCEEEEEECTT
T ss_pred EEECCCCCCEEEEEECCCCC-EEEEEECCCEEEEEEC-CCCEEEE-------------------EECCCCCEEEEEECCC
T ss_conf 39878998579999989989-9999938998999979-9978999-------------------9689899899999899
Q ss_pred CCEEEEEECCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCC
Q ss_conf 99899996999599998059982000145305767867899944999369999828993999985788146874088898
Q 001534 420 GLMLGVAFSKHIVHLYTYNPTGELRQHLEIDAHVGGVNDIAFAHPNKQLCIVTCGDDKMIKVWDVVAGRKQYTFEGHEAP 499 (1058)
Q Consensus 420 ~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~fs~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~ 499 (1058)
+++|++++.|+.|++||... +.+. .+.+|...|.+++|+|+++ ++++++.|+.+++|+.. ........++...
T Consensus 69 g~~las~~~d~~i~vWd~~~-~~~~---~~~~~~~~v~~~~~s~d~~--~l~~~~~d~~~~~~~~~-~~~~~~~~~~~~~ 141 (577)
T 2ymu_A 69 GQTIASASDDKTVKLWNRNG-QLLQ---TLTGHSSSVRGVAFSPDGQ--TIASASDDKTVKLWNRN-GQLLQTLTGHSSS 141 (577)
T ss_dssp SSEEEEEETTSCEEEEETTS-CEEE---EECCCSSCEEEEEECTTSS--EEEEEETTSCEEEEETT-CCEEEEECCCSSC
T ss_pred CCEEEEEECCCEEEEEECCC-CEEE---EEECCCCCEEEEEECCCCC--EEEEECCCCCEEECCCC-CCEEEECCCCCCC
T ss_conf 99999996989799998999-7899---9978999889999989999--89998079833520235-5200110477774
Q ss_pred EEEEEECCCCCCCEEEEEECCCEEEEEECCCCCCEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCE
Q ss_conf 57997304689329999907990999967889814795089994799998689997999702878986099964798814
Q 001534 500 VYSVCPHHKESIQFIFSTAIDGKIKAWLYDYLGSRVDYDAPGNWCTMMAYSADGTRLFSCGTSKEGESHLVEWNESEGAI 579 (1058)
Q Consensus 500 v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~~~~~~~~~~~~i~iwd~~~~~~ 579 (1058)
+.++.++++ +..+++++.++.+++|+... ........+...+..+.++|++.++++++. ++.+++|+. +++.
T Consensus 142 v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~v~~w~~-~~~~ 213 (577)
T 2ymu_A 142 VWGVAFSPD--GQTIASASDDKTVKLWNRNG-QLLQTLTGHSSSVWGVAFSPDGQTIASASD----DKTVKLWNR-NGQL 213 (577)
T ss_dssp EEEEEECTT--SSCEEEEETTSEEEEECTTS-CEEEEEECCSSCEEEEEECTTSSCEEEEET----TSEEEEECT-TSCE
T ss_pred EEEEEEECC--CCCCEECCCCCCEECCCCCE-EEEEECCCCCCCEEEEEECCCCCEEEEECC----CCEEEEEEC-CCCE
T ss_conf 355542037--76320025553100000000-000002687763566541699778999859----998999949-9968
Q ss_pred EEEECCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEECCCCEEEEEECCCCEEEE
Q ss_conf 67641778876369998589999999838990999978999148999168999981469990799999999789939999
Q 001534 580 KRTYSGFRKRSLGVVQFDTTRNRFLAAGDEFQIKFWDMDNMNMLTTVDADGGLPASPRLRFNKEGSLLAVTTSDNGIKIL 659 (1058)
Q Consensus 580 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 659 (1058)
+..+.+|.. .+.+++|+|++.++++++.|+.|++|+.. ++.+..+..+. ..+.+++|+|++..+++++.|+.+++|
T Consensus 214 ~~~~~~~~~-~v~~~~~s~dg~~l~~~~~d~~i~~w~~~-~~~~~~~~~~~--~~v~~v~~~~d~~~l~~~~~d~~i~~w 289 (577)
T 2ymu_A 214 LQTLTGHSS-SVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHS--SSVNGVAFRPDGQTIASASDDKTVKLW 289 (577)
T ss_dssp EEEEECCSS-CEEEEEECTTSSCEEEEETTSCEEEECTT-SCEEEEECCCS--SCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EEEEECCCC-CEEEEEECCCCCEEEEEECCCEEEEEECC-CCEEEEEECCC--CCEEEEEECCCCCEEEEEECCCEEEEE
T ss_conf 999946889-88999997999999999189989999599-97999980688--987999996899999999599979999
Q ss_pred ECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 97897400100258733445799999899975334458876543224798899999999843454577887666677654
Q 001534 660 ANSDGVRLLRMLEGRAMDKNRCPSEPISSKPLTINALGPASNVSAAIAPTLERPDRGPPAVSISSLGTIDGSRLVDVKPR 739 (1058)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (1058)
+... +....+.+|...+.. ..+++++..+
T Consensus 290 ~~~~--~~~~~~~~h~~~v~~-------------------------------------------------~~~~~~~~~l 318 (577)
T 2ymu_A 290 NRNG--QLLQTLTGHSSSVWG-------------------------------------------------VAFSPDGQTI 318 (577)
T ss_dssp ETTS--CEEEEECCCSSCEEE-------------------------------------------------EEECTTSSEE
T ss_pred ECCC--CEEEEEECCCCCEEE-------------------------------------------------EEECCCCCEE
T ss_conf 4899--589997068897699-------------------------------------------------9999999999
Q ss_pred CCC-CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 333-4455322135776786630388638975767659999916874588831256289988256787988742234565
Q 001534 740 VAE-DVDKIKSWRIPDISDPSQIKALRLPDSIAASKVVRLIYTNSGLSLLALASNAVHKLWKWQRTERNPSGKATANVAP 818 (1058)
Q Consensus 740 ~~~-~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~ 818 (1058)
+++ .++.+++|+... ..... +. .|...+.+++|+|+++.+++++.++.+++|+...
T Consensus 319 ~t~~~d~~i~~w~~~~----~~~~~--~~--~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~--------------- 375 (577)
T 2ymu_A 319 ASASDDKTVKLWNRNG----QHLQT--LT--GHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG--------------- 375 (577)
T ss_dssp EEEETTSCEEEEETTS----CEEEE--EC--CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTC---------------
T ss_pred EEEECCCEEEEEECCC----CEEEE--EE--CCCCCEEEEEECCCCCEEEEEECCCEEEEECCCC---------------
T ss_conf 9996999599996999----72578--74--7889779999989999999996999899990899---------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEE-CCEEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEE
Q ss_conf 00379998731146688999999845999716996999981-99399998778608999507988848999807999889
Q 001534 819 QLWQPPSGTLMTNDINESKPTEESAACIALSKNDSYVMSAS-GGKVSLFNMMTFKVMTMFMSPPPAATFLAFHPQDNNII 897 (1058)
Q Consensus 819 ~l~~~~~~~~~~~~~~~~~h~~~~i~~i~~s~d~~~la~~s-dg~i~iwd~~~~~~~~~~~~~~~~i~~l~~s~~~~~~l 897 (1058)
.... .+.+ | ...+++++|+||+++|++++ |+.|++|+. +++.+..+.+|...|++++|+| ++++|
T Consensus 376 --------~~~~-~~~~--~-~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~-d~~~l 441 (577)
T 2ymu_A 376 --------QLLQ-TLTG--H-SSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSP-DDQTI 441 (577)
T ss_dssp --------CEEE-EEEC--C-SSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECT-TSSEE
T ss_pred --------CEEE-EECC--C-CCCEEEEEECCCCCEEEEEECCCEEEEEEC-CCCEEEEECCCCCCEEEEEECC-CCCEE
T ss_conf --------7899-8527--8-897489999899999999949998999969-9978989628899757999989-99999
Q ss_pred EEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCE
Q ss_conf 99848970999993155367888177798689999589998999938991999968987400102432578989999780
Q 001534 898 AIGMEDSSVQIYNVRVDEVKTKLKGHQNRITGLAFSPTLNALVSSGADAQLCMWSIDKWEKLKSRFIQAPAGRQSPLVGE 977 (1058)
Q Consensus 898 asg~~dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spd~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v 977 (1058)
++++.|+.|++|+. +++.+..+.+|...|++++|+||+++|++++.|+.|++|+.. ++ .+....+|. ..|
T Consensus 442 ~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~~-----~~~~~~~h~---~~v 511 (577)
T 2ymu_A 442 ASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQ-----LLQTLTGHS---SSV 511 (577)
T ss_dssp EEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-SC-----EEEEEECCS---SCE
T ss_pred EEECCCCEEEEEEC-CCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEECCC-CC-----EEEEEECCC---CCE
T ss_conf 99939998999979-998899972789977899996999999999198979999399-97-----899986799---998
Q ss_pred EEEEECCCCCEEEEE-ECCEEEEEECCCCEEEEEEE--CCCCCEEECCCCCEEEEEECCCEEEEEC
Q ss_conf 389996899699999-49919999189970158841--2101168712992999998898199972
Q 001534 978 TKVQFHNDQTHLLVV-HESQISVYDSKLECSRSVSF--LSLCPYVFGVSSIFLLSTLTKLSVAVHD 1040 (1058)
Q Consensus 978 ~~~~fs~d~~~l~~~-~d~~i~iwd~~~~~~~~~~~--~~~~~~~~s~~~~~l~~~~~d~~v~v~~ 1040 (1058)
++++|+||+++|+++ .|+.|++||.+++++..+.. ..+..++|++|+++|++++.|+.|++||
T Consensus 512 ~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 512 RGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEECCCCCEEEEEECCCEEEEEECCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEC
T ss_conf 999991899999999896999999699978989718888878999968999999990899999969
No 3
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=537.55 Aligned_cols=535 Identities=15% Similarity=0.174 Sum_probs=396.1
Q ss_pred EEEEE-CCCCCEEEEEEECCCCEEEEEEECCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 56860-28997369998159972999992788299998367653345751210133345321010136788673899988
Q 001534 339 VVRTL-NQGSNVMSMDFHPQQQTILLVGTNVGDISLWEVGSRERLAHKPFKVWDISAASMPLQNALLNDAAISVNRCVWG 417 (1058)
Q Consensus 339 ~~~~~-~h~~~V~~~~fspdg~~lla~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s 417 (1058)
...++ .|.+.|++++|||||+ ++|+|+.||.|+|||+.+++.... ..+.+|.+.|.+++|+
T Consensus 51 ~~~~~~~h~~~v~~~~~spdg~-~lasg~~d~~v~lWd~~~~~~~~~-----------------~~~~~~~~~v~~v~fs 112 (611)
T 1nr0_A 51 DTEIYTEHSHQTTVAKTSPSGY-YCASGDVHGNVRIWDTTQTTHILK-----------------TTIPVFSGPVKDISWD 112 (611)
T ss_dssp CCEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEESSSTTCCEE-----------------EEEECSSSCEEEEEEC
T ss_pred CCEEECCCCCCEEEEEECCCCC-EEEEEECCCCEEEEECCCCCCEEE-----------------EEECCCCCCEEEEEEC
T ss_conf 2737658998659999999996-899994899789948989841566-----------------7622557844899989
Q ss_pred CCCCEEEEEECC----CEEEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEE
Q ss_conf 999989999699----9599998059982000145305767867899944999369999828993999985788146874
Q 001534 418 PDGLMLGVAFSK----HIVHLYTYNPTGELRQHLEIDAHVGGVNDIAFAHPNKQLCIVTCGDDKMIKVWDVVAGRKQYTF 493 (1058)
Q Consensus 418 pd~~~la~~~~d----~~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~fs~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~l 493 (1058)
||+++|++++.+ +.|++|| .+.... .+.+|...|++++|+|++.. .+++++.|++|++||..++++...+
T Consensus 113 ~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~---~l~gh~~~v~~v~f~p~~~~-~l~s~s~D~~v~lwd~~~~~~~~~l 186 (611)
T 1nr0_A 113 SESKRIAAVGEGRERFGHVFLFD--TGTSNG---NLTGQARAMNSVDFKPSRPF-RIISGSDDNTVAIFEGPPFKFKSTF 186 (611)
T ss_dssp TTSCEEEEEECCSSCSEEEEETT--TCCBCB---CCCCCSSCEEEEEECSSSSC-EEEEEETTSCEEEEETTTBEEEEEE
T ss_pred CCCCEEEEEECCCCCEEEEEEEE--CCCCCC---EECCCCCCCEEEEECCCCCE-EEEEEECCCEEEEEECCCCEEEEEE
T ss_conf 99997999989977366999963--899763---25478898369998899982-9999928980999979997576652
Q ss_pred ECCCCCEEEEEECCCCCCCEEEEEECCCEEEEEECCCCCCEEEEC-------CCCCCEEEEEECCCCCEEEEEECCCCCC
Q ss_conf 088898579973046893299999079909999678898147950-------8999479999868999799970287898
Q 001534 494 EGHEAPVYSVCPHHKESIQFIFSTAIDGKIKAWLYDYLGSRVDYD-------APGNWCTMMAYSADGTRLFSCGTSKEGE 566 (1058)
Q Consensus 494 ~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~i~~s~~~~~l~~~~~~~~~~ 566 (1058)
.+|...|.+++|+| ++.++++++.|++|++||+.++.....+. .|...|.+++|+|+++++++++. |
T Consensus 187 ~~H~~~V~~v~fsp--dg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~----D 260 (611)
T 1nr0_A 187 GEHTKFVHSVRYNP--DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASA----D 260 (611)
T ss_dssp CCCSSCEEEEEECT--TSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEET----T
T ss_pred CCCCCCEEEEEECC--CCCEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEC----C
T ss_conf 00257169999979--99989999899919998899982866513664323566787899999799999999908----9
Q ss_pred CEEEEEECCCCCEEEEECCCCCC--CEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEECCC
Q ss_conf 60999647988146764177887--6369998589999999838990999978999148999168999981469990799
Q 001534 567 SHLVEWNESEGAIKRTYSGFRKR--SLGVVQFDTTRNRFLAAGDEFQIKFWDMDNMNMLTTVDADGGLPASPRLRFNKEG 644 (1058)
Q Consensus 567 ~~i~iwd~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 644 (1058)
+.|++||+.+++++..+..+... ....+.| ++..+++++.|+.+++|+...++....+..|. ..|.+++|+|++
T Consensus 261 ~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~--~~v~~l~~spdg 336 (611)
T 1nr0_A 261 KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW--TKQALVSISANGFINFVNPELGSIDQVRYGHN--KAITALSSSADG 336 (611)
T ss_dssp SEEEEEETTTTEEEEEEECCSSGGGCEEEEEE--CSSCEEEEETTCCEEEEETTTTEEEEEECCCS--SCEEEEEECTTS
T ss_pred CEEEEEECCCCCEEEEECCCCCCCCEEEEEEE--CCCEEEEEECCCCEEEEECCCCCCCEEECCCC--CCEEEEEEECCC
T ss_conf 80999968887013440478876640689997--38879999589968999688997446983788--888999991899
Q ss_pred CEEEEEECCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999978993999997897400100258733445799999899975334458876543224798899999999843454
Q 001534 645 SLLAVTTSDNGIKILANSDGVRLLRMLEGRAMDKNRCPSEPISSKPLTINALGPASNVSAAIAPTLERPDRGPPAVSISS 724 (1058)
Q Consensus 645 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 724 (1058)
++|++++.|+.|++|++.++. ....+
T Consensus 337 ~~l~s~s~D~~v~~Wd~~~~~-~~~~~----------------------------------------------------- 362 (611)
T 1nr0_A 337 KTLFSADAEGHINSWDISTGI-SNRVF----------------------------------------------------- 362 (611)
T ss_dssp SEEEEEETTSCEEEEETTTCC-EEECS-----------------------------------------------------
T ss_pred CEEEEEECCCCEEEEECCCCC-EEEEC-----------------------------------------------------
T ss_conf 989999589849999788792-56321-----------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCC
Q ss_conf 57788766667765433344553221357767866303886389757676599999168745888312562899882567
Q 001534 725 LGTIDGSRLVDVKPRVAEDVDKIKSWRIPDISDPSQIKALRLPDSIAASKVVRLIYTNSGLSLLALASNAVHKLWKWQRT 804 (1058)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~i~iw~~~~~ 804 (1058)
...|...+.+++|++++ .+++++.|+.+++|+....
T Consensus 363 -------------------------------------------~~~h~~~v~~~~~s~~~-~l~s~s~d~~v~~w~~~~~ 398 (611)
T 1nr0_A 363 -------------------------------------------PDVHATMITGIKTTSKG-DLFTVSWDDHLKVVPAGGS 398 (611)
T ss_dssp -------------------------------------------SCSCSSCEEEEEECTTS-CEEEEETTTEEEEECSSSS
T ss_pred -------------------------------------------CCCCCCEEEEEEECCCC-CEEEEECCCCEEEEECCCC
T ss_conf -------------------------------------------66776507899987899-6999984896689546885
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCEEEEEECCCCEEEEEECCCCCCE
Q ss_conf 87988742234565003799987311466889999998459997169969999819939999877860899950798884
Q 001534 805 ERNPSGKATANVAPQLWQPPSGTLMTNDINESKPTEESAACIALSKNDSYVMSASGGKVSLFNMMTFKVMTMFMSPPPAA 884 (1058)
Q Consensus 805 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~h~~~~i~~i~~s~d~~~la~~sdg~i~iwd~~~~~~~~~~~~~~~~i 884 (1058)
..... .... .. . .....+++|+||++.++++.++.+++|+. ++ +..+. |...+
T Consensus 399 ~~~~~-----------------~~~~--~~---~-~~~~~~~~~s~dg~~~~~~~~~~v~~~~~--~~-~~~~~-~~~~v 451 (611)
T 1nr0_A 399 GVDSS-----------------KAVA--NK---L-SSQPLGLAVSADGDIAVAACYKHIAIYSH--GK-LTEVP-ISYNS 451 (611)
T ss_dssp SSCTT-----------------SCCE--EE---C-SSCEEEEEECTTSSCEEEEESSEEEEEET--TE-EEEEE-CSSCE
T ss_pred CCCCC-----------------CEEE--EE---C-CCCCCEEEEECCCCEEEEEECCEEEEEEC--CC-EEEEE-CCCCC
T ss_conf 43565-----------------2120--01---4-89970799807996999996763999848--94-34640-68895
Q ss_pred EEEEEECCCCCEEEEEECCCEEEEEECCCCEE--EEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEECCC-CCCCCC
Q ss_conf 89998079998899984897099999315536--788817779868999958999899993899199996898-740010
Q 001534 885 TFLAFHPQDNNIIAIGMEDSSVQIYNVRVDEV--KTKLKGHQNRITGLAFSPTLNALVSSGADAQLCMWSIDK-WEKLKS 961 (1058)
Q Consensus 885 ~~l~~s~~~~~~lasg~~dg~I~iwd~~~~~~--~~~l~~h~~~v~~l~~spd~~~l~s~s~D~~i~iwd~~~-~~~~~~ 961 (1058)
.+++|+| |+++||+|+.|+.|++|++.++.. ... .+|...|++++||||+++|++++.|++|++|++.+ ++....
T Consensus 452 ~~va~sp-dg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~ 529 (611)
T 1nr0_A 452 SCVALSN-DKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHT 529 (611)
T ss_dssp EEEEECT-TSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCC
T ss_pred EEEEEEC-CCCEEEEECCCCEEEEEECCCCCEEEEEC-CCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCCEEEE
T ss_conf 4999928-99899996899739999945992224101-577886079999899998999948998999885778722321
Q ss_pred EEEECCCCCCCCCCCEEEEEECCCCCEEEEE-ECCEEEEEEC-CCC-EE-EEEEE---CCCCCEEECCCCCEEEEEECCC
Q ss_conf 2432578989999780389996899699999-4991999918-997-01-58841---2101168712992999998898
Q 001534 962 RFIQAPAGRQSPLVGETKVQFHNDQTHLLVV-HESQISVYDS-KLE-CS-RSVSF---LSLCPYVFGVSSIFLLSTLTKL 1034 (1058)
Q Consensus 962 ~~~~~~~~~~~~~~~v~~~~fs~d~~~l~~~-~d~~i~iwd~-~~~-~~-~~~~~---~~~~~~~~s~~~~~l~~~~~d~ 1034 (1058)
....+|. ..|.+++|+||+++|+++ .|++|++|++ ++. .+ ..... ..+..+.|+++++ |++++.|+
T Consensus 530 ---~~~~~H~---~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~-l~s~~~D~ 602 (611)
T 1nr0_A 530 ---NSWTFHT---AKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT-IVSAGQDS 602 (611)
T ss_dssp ---CCCCCCS---SCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-EEEEETTS
T ss_pred ---EEEEECC---CCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCHHHCCCCCCCEEEEEECCCCE-EEEECCCC
T ss_conf ---0264046---6425899899899799997997299997887555632644467656711899858997-99952887
Q ss_pred EEEEECC
Q ss_conf 1999729
Q 001534 1035 SVAVHDP 1041 (1058)
Q Consensus 1035 ~v~v~~~ 1041 (1058)
.|++|+.
T Consensus 603 ~i~lW~~ 609 (611)
T 1nr0_A 603 NIKFWNV 609 (611)
T ss_dssp CEEEEEC
T ss_pred CEEEEEC
T ss_conf 7899844
No 4
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=1.00 E-value=1 Score=525.13 Aligned_cols=563 Identities=15% Similarity=0.213 Sum_probs=453.1
Q ss_pred CCCCCCEEEECCCCCCCCEECCC-------CCCCCEEEEEC-CCCCEEEEEEECCCCEEEEEEECCCCEEEEECCCCCCC
Q ss_conf 13896424413889876111278-------55402568602-89973699981599729999927882999983676533
Q 001534 311 RTGQSDEVSFAGVAHTPNVYSQD-------DLTKTVVRTLN-QGSNVMSMDFHPQQQTILLVGTNVGDISLWEVGSRERL 382 (1058)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~-h~~~V~~~~fspdg~~lla~g~~dg~i~iwd~~~~~~~ 382 (1058)
+.+.+.+++|+++|..+++...| ..+++.+..+. |.+.|++++|+|+++ ++++|+.||.|++||+.+++.+
T Consensus 614 h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~d~~v~vwd~~~~~~~ 692 (1249)
T 3sfz_A 614 HTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDS-YIATCSADKKVKIWDSATGKLV 692 (1249)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCEE
T ss_pred CCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEEECCCC-EEEEEECCCEEEEEECCCCCEE
T ss_conf 666489999879999899994889499999899978887606777789999926999-8999818995999877999368
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECC--CCCEEEEEECCCEEEEEEECCCCCEEEEEEEECCCCCEEEEE
Q ss_conf 457512101333453210101367886738999889--999899996999599998059982000145305767867899
Q 001534 383 AHKPFKVWDISAASMPLQNALLNDAAISVNRCVWGP--DGLMLGVAFSKHIVHLYTYNPTGELRQHLEIDAHVGGVNDIA 460 (1058)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp--d~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~ 460 (1058)
.. +.+|...|.+++|+| ++.++++|+.|+.|++||+.++.... .+.+|...|++++
T Consensus 693 ~~-------------------~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~---~~~~h~~~v~~~~ 750 (1249)
T 3sfz_A 693 HT-------------------YDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRN---TMFGHTNSVNHCR 750 (1249)
T ss_dssp EE-------------------EECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEE---EECCCSSCEEEEE
T ss_pred EE-------------------ECCCCCCEEEEEEECCCCCEEEEEEECCCEEEEEECCCCCHHH---EECCCCCCEEEEE
T ss_conf 99-------------------9589973799998408996599998089709999899963422---0127779788999
Q ss_pred EECCCCCEEEEEECCCCCEEEEECCCCCEEEEEEC-------------CCCCEEEEEECCCCCCCEEEEEECCCEEEEEE
Q ss_conf 94499936999982899399998578814687408-------------88985799730468932999990799099996
Q 001534 461 FAHPNKQLCIVTCGDDKMIKVWDVVAGRKQYTFEG-------------HEAPVYSVCPHHKESIQFIFSTAIDGKIKAWL 527 (1058)
Q Consensus 461 fs~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~-------------~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd 527 (1058)
|+|+++ ++++++.|+.|++||+.+++....+.. ....+.+++|++ ++..+++++ ++.+.+|+
T Consensus 751 ~sp~~~--~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--dg~~l~~~~-~~~v~~~d 825 (1249)
T 3sfz_A 751 FSPDDE--LLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSA--DGDKIIVAA-KNKVLLFD 825 (1249)
T ss_dssp ECSSTT--EEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCT--TSSEEEEEE-TTEEEEEE
T ss_pred EECCCC--EEEEEECCCEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEEEECC--CCCEEEEEC-CCCEEEEE
T ss_conf 925999--8999978985999968888655302023210246776445650179999978--998899975-89599999
Q ss_pred CCCCCCEEEEC-CCCCCEEEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCEEEEE
Q ss_conf 78898147950-89994799998689997999702878986099964798814676417788763699985899999998
Q 001534 528 YDYLGSRVDYD-APGNWCTMMAYSADGTRLFSCGTSKEGESHLVEWNESEGAIKRTYSGFRKRSLGVVQFDTTRNRFLAA 606 (1058)
Q Consensus 528 ~~~~~~~~~~~-~~~~~v~~i~~s~~~~~l~~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 606 (1058)
+.++.....+. .+...+.+++|+|++..+++++. ++.+.+|+..++..+..+.+|.. .+.+++|+|++..++++
T Consensus 826 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~----dg~v~vwd~~~~~~~~~~~~h~~-~v~~v~~spdg~~l~s~ 900 (1249)
T 3sfz_A 826 IHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALS----QYCVELWNIDSRLKVADCRGHLS-WVHGVMFSPDGSSFLTA 900 (1249)
T ss_dssp TTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECS----SSCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEE
T ss_pred ECCCCCEEEECCCCCCCEEEEEECCCCCEEEEEEC----CCEEEEEECCCCCEEEECCCCCC-CEEEEEECCCCCEEEEE
T ss_conf 56897235774787776079998278888999947----98699998678956532278766-56899998999989999
Q ss_pred ECCCEEEEEECCCCCE-----------------------------EEEEECC------CCCCCCCEEEEECCCCEEEEEE
Q ss_conf 3899099997899914-----------------------------8999168------9999814699907999999997
Q 001534 607 GDEFQIKFWDMDNMNM-----------------------------LTTVDAD------GGLPASPRLRFNKEGSLLAVTT 651 (1058)
Q Consensus 607 ~~dg~i~iwd~~~~~~-----------------------------~~~~~~~------~~~~~v~~~~~s~~~~~l~~~~ 651 (1058)
+.|+.+++|++..... ....... .....+.+++|+|++.++++++
T Consensus 901 s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~ 980 (1249)
T 3sfz_A 901 SDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGD 980 (1249)
T ss_dssp ETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEE
T ss_pred ECCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCEEEECCCCCEEEEEECCCCCEEEEEC
T ss_conf 58972898874665201021133103689759986899813776248984476508972567278999958997799986
Q ss_pred CCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89939999978974001002587334457999998999753344588765432247988999999998434545778876
Q 001534 652 SDNGIKILANSDGVRLLRMLEGRAMDKNRCPSEPISSKPLTINALGPASNVSAAIAPTLERPDRGPPAVSISSLGTIDGS 731 (1058)
Q Consensus 652 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (1058)
.+|.|++|+..++ .....+.+|...+.. ..
T Consensus 981 ~~g~i~i~d~~~~-~~~~~~~~h~~~v~~-------------------------------------------------l~ 1010 (1249)
T 3sfz_A 981 EDGAIKIIELPNN-RVFSSGVGHKKAVRH-------------------------------------------------IQ 1010 (1249)
T ss_dssp TTSCCEEEETTTT-SCEEECCCCSSCCCC-------------------------------------------------EE
T ss_pred CCCCEEEEECCCC-CEEEECCCCCCCEEE-------------------------------------------------EE
T ss_conf 9998899975787-234430367771689-------------------------------------------------99
Q ss_pred CCCCCCCCCCC-CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCCC
Q ss_conf 66677654333-44553221357767866303886389757676599999168745888312562899882567879887
Q 001534 732 RLVDVKPRVAE-DVDKIKSWRIPDISDPSQIKALRLPDSIAASKVVRLIYTNSGLSLLALASNAVHKLWKWQRTERNPSG 810 (1058)
Q Consensus 732 ~~~~~~~~~~~-~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~ 810 (1058)
+++++..++++ .++.+++|++..... ... ..|...+.++++++++. +++++.|+.+++|++.+.
T Consensus 1011 ~s~dg~~l~s~~~dg~i~vwd~~~~~~------~~~--~~~~~~v~~~~~~~~~~-l~~~~~dg~v~vwd~~~~------ 1075 (1249)
T 3sfz_A 1011 FTADGKTLISSSEDSVIQVWNWQTGDY------VFL--QAHQETVKDFRLLQDSR-LLSWSFDGTVKVWNVITG------ 1075 (1249)
T ss_dssp ECSSSSCEEEECSSSBEEEEETTTTEE------ECC--BCCSSCEEEEEECSSSE-EEEEESSSEEEEEETTTT------
T ss_pred ECCCCCEEEEECCCCEEEEEECCCCCE------EEE--ECCCCCEEEEEECCCCC-EEEEECCCCEEEEECCCC------
T ss_conf 989999899986998799998799966------898--52787389999908995-899978896899888988------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEE-CCEEEEEECCCCEEEEEECCCCCCEEEEEE
Q ss_conf 4223456500379998731146688999999845999716996999981-993999987786089995079888489998
Q 001534 811 KATANVAPQLWQPPSGTLMTNDINESKPTEESAACIALSKNDSYVMSAS-GGKVSLFNMMTFKVMTMFMSPPPAATFLAF 889 (1058)
Q Consensus 811 ~~~~~~~~~l~~~~~~~~~~~~~~~~~h~~~~i~~i~~s~d~~~la~~s-dg~i~iwd~~~~~~~~~~~~~~~~i~~l~~ 889 (1058)
..... +.+ | ...+.+++|+||++++++++ |+.|++||+.+++++..+.+|...|++++|
T Consensus 1076 ----------------~~~~~-~~~--~-~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~ 1135 (1249)
T 3sfz_A 1076 ----------------RIERD-FTC--H-QGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAF 1135 (1249)
T ss_dssp ----------------CCCEE-EEC--C-SSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEE
T ss_pred ----------------CEEEE-ECC--C-CCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCEEEEEE
T ss_conf ----------------65588-746--6-884899999899998999849994899878985001255068776799999
Q ss_pred ECCCCCEEEEEECCCEEEEEECCCCEEEEEE---------ECCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCC
Q ss_conf 0799988999848970999993155367888---------1777986899995899989999389919999689874001
Q 001534 890 HPQDNNIIAIGMEDSSVQIYNVRVDEVKTKL---------KGHQNRITGLAFSPTLNALVSSGADAQLCMWSIDKWEKLK 960 (1058)
Q Consensus 890 s~~~~~~lasg~~dg~I~iwd~~~~~~~~~l---------~~h~~~v~~l~~spd~~~l~s~s~D~~i~iwd~~~~~~~~ 960 (1058)
+| ++++|++++.||.|++||+.+++.+..+ .+|.+.|++++|+||+++|++++ |.|++|++.+++...
T Consensus 1136 s~-dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~--g~v~vwd~~~g~~~~ 1212 (1249)
T 3sfz_A 1136 SL-DGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG--GYLKWWNVATGDSSQ 1212 (1249)
T ss_dssp CS-SSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES--SSEEEBCSSSCBCCC
T ss_pred CC-CCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEECC--CEEEEEECCCCCEEE
T ss_conf 79-999899982899799998899945788514444421025674289999978999899779--859998988895004
Q ss_pred CEEEECCCCCCCCCCCEEEEEECCCCCEEEEE-ECCEEEEEEC
Q ss_conf 02432578989999780389996899699999-4991999918
Q 001534 961 SRFIQAPAGRQSPLVGETKVQFHNDQTHLLVV-HESQISVYDS 1002 (1058)
Q Consensus 961 ~~~~~~~~~~~~~~~~v~~~~fs~d~~~l~~~-~d~~i~iwd~ 1002 (1058)
...+|. ..|.++.|+||+++++++ .||.+++|++
T Consensus 1213 -----~~~~~~---~~i~~~~~s~dg~~l~~~~~dg~v~vw~l 1247 (1249)
T 3sfz_A 1213 -----TFYTNG---TNLKKIHVSPDFRTYVTVDNLGILYILQV 1247 (1249)
T ss_dssp -----CCCCSS---CCCCCCEECSSSCCEEEECTTCCEEEECC
T ss_pred -----EEECCC---CCCCEEEECCCCCEEEEECCCCEEEEEEE
T ss_conf -----640047---75327999789877999668817999764
No 5
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=1.00 E-value=1 Score=523.23 Aligned_cols=528 Identities=22% Similarity=0.381 Sum_probs=439.1
Q ss_pred CCCEEEEEC-CCCCEEEEEEECCCCEEEEEEECCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 402568602-8997369998159972999992788299998367653345751210133345321010136788673899
Q 001534 336 TKTVVRTLN-QGSNVMSMDFHPQQQTILLVGTNVGDISLWEVGSRERLAHKPFKVWDISAASMPLQNALLNDAAISVNRC 414 (1058)
Q Consensus 336 ~~~~~~~~~-h~~~V~~~~fspdg~~lla~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i 414 (1058)
+.++++++. |.+.|++++|+||++ +|++++.|+.|+|||.. ++.+.. +.+|...|.++
T Consensus 46 ~~~~~~~l~gh~~~V~~l~fspdg~-~las~~~d~~i~vWd~~-~~~~~~-------------------~~~~~~~v~~~ 104 (577)
T 2ymu_A 46 NGQLLQTLTGHSSSVWGVAFSPDGQ-TIASASDDKTVKLWNRN-GQLLQT-------------------LTGHSSSVRGV 104 (577)
T ss_dssp TSCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETT-SCEEEE-------------------ECCCSSCEEEE
T ss_pred CCCEEEEEECCCCCEEEEEECCCCC-EEEEEECCCEEEEEECC-CCEEEE-------------------EECCCCCEEEE
T ss_conf 9978999968989989999989999-99999698979999899-978999-------------------97899988999
Q ss_pred EECCCCCEEEEEECCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEE
Q ss_conf 98899998999969995999980599820001453057678678999449993699998289939999857881468740
Q 001534 415 VWGPDGLMLGVAFSKHIVHLYTYNPTGELRQHLEIDAHVGGVNDIAFAHPNKQLCIVTCGDDKMIKVWDVVAGRKQYTFE 494 (1058)
Q Consensus 415 ~~spd~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~fs~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~l~ 494 (1058)
+|+|++++|++++.|+.+++|+..... . ....++...+.++.++|++. .+++++.++.+++|+. .........
T Consensus 105 ~~s~d~~~l~~~~~d~~~~~~~~~~~~-~---~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~ 177 (577)
T 2ymu_A 105 AFSPDGQTIASASDDKTVKLWNRNGQL-L---QTLTGHSSSVWGVAFSPDGQ--TIASASDDKTVKLWNR-NGQLLQTLT 177 (577)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTCCE-E---EEECCCSSCEEEEEECTTSS--CEEEEETTSEEEEECT-TSCEEEEEE
T ss_pred EECCCCCEEEEECCCCCEEECCCCCCE-E---EECCCCCCCEEEEEEECCCC--CCEECCCCCCEECCCC-CEEEEEECC
T ss_conf 998999989998079833520235520-0---11047777435554203776--3200255531000000-000000026
Q ss_pred CCCCCEEEEEECCCCCCCEEEEEECCCEEEEEECCCCCCEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCEEEEEEC
Q ss_conf 88898579973046893299999079909999678898147950899947999986899979997028789860999647
Q 001534 495 GHEAPVYSVCPHHKESIQFIFSTAIDGKIKAWLYDYLGSRVDYDAPGNWCTMMAYSADGTRLFSCGTSKEGESHLVEWNE 574 (1058)
Q Consensus 495 ~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~~~~~~~~~~~~i~iwd~ 574 (1058)
.+...+.++.++++ +.++++++.|+.|++|+. +++....+..+...+.+++|+|+++++++++. ++.+++|+.
T Consensus 178 ~~~~~v~~~~~~~~--~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~----d~~i~~w~~ 250 (577)
T 2ymu_A 178 GHSSSVWGVAFSPD--GQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASD----DKTVKLWNR 250 (577)
T ss_dssp CCSSCEEEEEECTT--SSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEET----TSCEEEECT
T ss_pred CCCCCEEEEEECCC--CCEEEEECCCCEEEEEEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEEC----CCEEEEEEC
T ss_conf 87763566541699--778999859998999949-99689999468898899999799999999918----998999959
Q ss_pred CCCCEEEEECCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEECCCCEEEEEECCC
Q ss_conf 98814676417788763699985899999998389909999789991489991689999814699907999999997899
Q 001534 575 SEGAIKRTYSGFRKRSLGVVQFDTTRNRFLAAGDEFQIKFWDMDNMNMLTTVDADGGLPASPRLRFNKEGSLLAVTTSDN 654 (1058)
Q Consensus 575 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 654 (1058)
+++.+..+.+|.. .+.+++|+|+++.+++++.|+.+++|+.. ++....+..|. ..+.+++|+|++..+++++.|+
T Consensus 251 -~~~~~~~~~~~~~-~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-~~~~~~~~~h~--~~v~~~~~~~~~~~l~t~~~d~ 325 (577)
T 2ymu_A 251 -NGQLLQTLTGHSS-SVNGVAFRPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHS--SSVWGVAFSPDGQTIASASDDK 325 (577)
T ss_dssp -TSCEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCS--SCEEEEEECTTSSEEEEEETTS
T ss_pred -CCCEEEEEECCCC-CEEEEEECCCCCEEEEEECCCEEEEEECC-CCEEEEEECCC--CCEEEEEECCCCCEEEEEECCC
T ss_conf -9979999806889-87999996899999999599979999489-95899970688--9769999999999999996999
Q ss_pred CEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 39999978974001002587334457999998999753344588765432247988999999998434545778876666
Q 001534 655 GIKILANSDGVRLLRMLEGRAMDKNRCPSEPISSKPLTINALGPASNVSAAIAPTLERPDRGPPAVSISSLGTIDGSRLV 734 (1058)
Q Consensus 655 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (1058)
.+++|+.... ....+.+|...+.. ..+++
T Consensus 326 ~i~~w~~~~~--~~~~~~~~~~~v~~-------------------------------------------------~~~s~ 354 (577)
T 2ymu_A 326 TVKLWNRNGQ--HLQTLTGHSSSVWG-------------------------------------------------VAFSP 354 (577)
T ss_dssp CEEEEETTSC--EEEEECCCSSCEEE-------------------------------------------------EEECT
T ss_pred EEEEEECCCC--EEEEEECCCCCEEE-------------------------------------------------EEECC
T ss_conf 5999969997--25787478897799-------------------------------------------------99989
Q ss_pred CCCCCCCC-CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCCCCCC
Q ss_conf 77654333-44553221357767866303886389757676599999168745888312562899882567879887422
Q 001534 735 DVKPRVAE-DVDKIKSWRIPDISDPSQIKALRLPDSIAASKVVRLIYTNSGLSLLALASNAVHKLWKWQRTERNPSGKAT 813 (1058)
Q Consensus 735 ~~~~~~~~-~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 813 (1058)
++..++++ .++.+++|+... .....+. .|...|.+++|+|+++.+++++.|+.+++|+..
T Consensus 355 ~g~~l~~~~~dg~v~~~~~~~----~~~~~~~----~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~----------- 415 (577)
T 2ymu_A 355 DGQTIASASDDKTVKLWNRNG----QLLQTLT----GHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN----------- 415 (577)
T ss_dssp TSSEEEEEETTSEEEEEETTC----CEEEEEE----CCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-----------
T ss_pred CCCEEEEEECCCEEEEECCCC----CEEEEEC----CCCCCEEEEEECCCCCEEEEEECCCEEEEEECC-----------
T ss_conf 999999996999899990899----7899852----788974899998999999999499989999699-----------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEE-CCEEEEEECCCCEEEEEECCCCCCEEEEEEECC
Q ss_conf 3456500379998731146688999999845999716996999981-993999987786089995079888489998079
Q 001534 814 ANVAPQLWQPPSGTLMTNDINESKPTEESAACIALSKNDSYVMSAS-GGKVSLFNMMTFKVMTMFMSPPPAATFLAFHPQ 892 (1058)
Q Consensus 814 ~~~~~~l~~~~~~~~~~~~~~~~~h~~~~i~~i~~s~d~~~la~~s-dg~i~iwd~~~~~~~~~~~~~~~~i~~l~~s~~ 892 (1058)
+.... .+.+ | ...+++++|+||++++++++ |+.|++|+. +++.+..+.+|...|++++|+|
T Consensus 416 ------------~~~~~-~~~~--~-~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~sp- 477 (577)
T 2ymu_A 416 ------------GQLLQ-TLTG--H-SSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSP- 477 (577)
T ss_dssp ------------CCEEE-EEEC--C-SSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECT-
T ss_pred ------------CCEEE-EECC--C-CCCEEEEEECCCCCEEEEECCCCEEEEEEC-CCCEEEEECCCCCCEEEEEECC-
T ss_conf ------------97898-9628--8-997579999899999999939998999979-9988999727899778999969-
Q ss_pred CCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCCC
Q ss_conf 99889998489709999931553678881777986899995899989999389919999689874001024325789899
Q 001534 893 DNNIIAIGMEDSSVQIYNVRVDEVKTKLKGHQNRITGLAFSPTLNALVSSGADAQLCMWSIDKWEKLKSRFIQAPAGRQS 972 (1058)
Q Consensus 893 ~~~~lasg~~dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~spd~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~ 972 (1058)
++++||+++.|+.|++|+. +++++..+.+|...|++++|+||+++|++++.|+.|++||.. ++ .+....+|.
T Consensus 478 d~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~-~~-----~~~~~~~h~- 549 (577)
T 2ymu_A 478 DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQ-----LLQTLTGHS- 549 (577)
T ss_dssp TSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-SC-----EEEEEECCS-
T ss_pred CCCEEEEEECCCEEEEECC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECC-CC-----EEEEECCCC-
T ss_conf 9999999919897999939-997899986799998999991899999999896999999699-97-----898971888-
Q ss_pred CCCCEEEEEECCCCCEEEEE-ECCEEEEEE
Q ss_conf 99780389996899699999-499199991
Q 001534 973 PLVGETKVQFHNDQTHLLVV-HESQISVYD 1001 (1058)
Q Consensus 973 ~~~~v~~~~fs~d~~~l~~~-~d~~i~iwd 1001 (1058)
..|.+++|+||+++|+++ .|++|++||
T Consensus 550 --~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 550 --SSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp --SCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred --CCEEEEEECCCCCEEEEEECCCEEEEEC
T ss_conf --8878999968999999990899999969
No 6
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=505.20 Aligned_cols=557 Identities=15% Similarity=0.176 Sum_probs=430.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH-HHCCCCCCCEEEEC
Q ss_conf 88899764323335899999998755799988899963212338999998873322478910021-01113896424413
Q 001534 243 VVSPSPGAIAGWMSSNSPSLPHPSMAAGPPGFVQPSSAVGFLKHPRTPTGMTGMDYQSADSDHLM-KRIRTGQSDEVSFA 321 (1058)
Q Consensus 243 ~~~~~~fs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 321 (1058)
.+..++|||+|+++++.. ++.+.+| ...+..... ...+.+.+.+++|+
T Consensus 20 ~~~~~~~spdg~~l~~~~--------~~~v~l~-----------------------~~~~~~~~~~~~~h~~~v~~~~~s 68 (611)
T 1nr0_A 20 TAVVLGNTPAGDKIQYCN--------GTSVYTV-----------------------PVGSLTDTEIYTEHSHQTTVAKTS 68 (611)
T ss_dssp CCCCCEECTTSSEEEEEE--------TTEEEEE-----------------------ETTCSSCCEEECCCSSCEEEEEEC
T ss_pred CEEEEEECCCCCEEEECC--------CCEEEEE-----------------------CCCCCCCCEEECCCCCCEEEEEEC
T ss_conf 236976679999799679--------9979994-----------------------578724273765899865999999
Q ss_pred CCCCCCCEECCCC---------CCCCEEEEEC-CCCCEEEEEEECCCCEEEEEEECC----CCEEEEECCCCCCCCCCCC
Q ss_conf 8898761112785---------5402568602-899736999815997299999278----8299998367653345751
Q 001534 322 GVAHTPNVYSQDD---------LTKTVVRTLN-QGSNVMSMDFHPQQQTILLVGTNV----GDISLWEVGSRERLAHKPF 387 (1058)
Q Consensus 322 ~~~~~~~~~~~~~---------~~~~~~~~~~-h~~~V~~~~fspdg~~lla~g~~d----g~i~iwd~~~~~~~~~~~~ 387 (1058)
|+|..++..+.|. .......++. |.++|.+++|+||++. +++++.+ +.|++|| .++....
T Consensus 69 pdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~-l~~~~~~~~~~~~v~~wd--~~~~~~~--- 142 (611)
T 1nr0_A 69 PSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKR-IAAVGEGRERFGHVFLFD--TGTSNGN--- 142 (611)
T ss_dssp TTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCE-EEEEECCSSCSEEEEETT--TCCBCBC---
T ss_pred CCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCE-EEEEECCCCCEEEEEEEE--CCCCCCE---
T ss_conf 9996899994899789948989841566762255784489998999997-999989977366999963--8997632---
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCC-EEEEEECCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCC
Q ss_conf 2101333453210101367886738999889999-899996999599998059982000145305767867899944999
Q 001534 388 KVWDISAASMPLQNALLNDAAISVNRCVWGPDGL-MLGVAFSKHIVHLYTYNPTGELRQHLEIDAHVGGVNDIAFAHPNK 466 (1058)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~h~~~v~~i~~spd~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~fs~~~~ 466 (1058)
+.+|...|.+++|+|++. .|++++.|++|++||..+++... .+.+|...|++++|+|+++
T Consensus 143 ----------------l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~---~l~~H~~~V~~v~fspdg~ 203 (611)
T 1nr0_A 143 ----------------LTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKS---TFGEHTKFVHSVRYNPDGS 203 (611)
T ss_dssp ----------------CCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEE---EECCCSSCEEEEEECTTSS
T ss_pred ----------------ECCCCCCCEEEEECCCCCEEEEEEECCCEEEEEECCCCEEEE---EECCCCCCEEEEEECCCCC
T ss_conf ----------------547889836999889998299999289809999799975766---5200257169999979999
Q ss_pred CEEEEEECCCCCEEEEECCCCCEEEEEE-------CCCCCEEEEEECCCCCCCEEEEEECCCEEEEEECCCCCCEEEECC
Q ss_conf 3699998289939999857881468740-------888985799730468932999990799099996788981479508
Q 001534 467 QLCIVTCGDDKMIKVWDVVAGRKQYTFE-------GHEAPVYSVCPHHKESIQFIFSTAIDGKIKAWLYDYLGSRVDYDA 539 (1058)
Q Consensus 467 ~~~l~s~~~d~~i~iwd~~~~~~~~~l~-------~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 539 (1058)
++++++.|++|++||+.+++.+..+. +|...|.+++|+| ++.+|++++.|++|++||+.+++....+..
T Consensus 204 --~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~sp--dg~~l~s~s~D~~v~lWd~~~~~~~~~~~~ 279 (611)
T 1nr0_A 204 --LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP--DGTKIASASADKTIKIWNVATLKVEKTIPV 279 (611)
T ss_dssp --EEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT--TSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred --EEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECC--CCCEEEEEECCCEEEEEECCCCCEEEEECC
T ss_conf --8999989991999889998286651366432356678789999979--999999990898099996888701344047
Q ss_pred CC---CCEEEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCEEEEEECCCEEEEEE
Q ss_conf 99---947999986899979997028789860999647988146764177887636999858999999983899099997
Q 001534 540 PG---NWCTMMAYSADGTRLFSCGTSKEGESHLVEWNESEGAIKRTYSGFRKRSLGVVQFDTTRNRFLAAGDEFQIKFWD 616 (1058)
Q Consensus 540 ~~---~~v~~i~~s~~~~~l~~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd 616 (1058)
+. .....+.| ++..+++++. ++.+++|+...+.+...+.+|.. .+.+++|+|+++++++++.|+.|++||
T Consensus 280 ~~~~~~~~~~~~~--~~~~l~s~s~----d~~i~~~~~~~~~~~~~~~gh~~-~v~~l~~spdg~~l~s~s~D~~v~~Wd 352 (611)
T 1nr0_A 280 GTRIEDQQLGIIW--TKQALVSISA----NGFINFVNPELGSIDQVRYGHNK-AITALSSSADGKTLFSADAEGHINSWD 352 (611)
T ss_dssp CSSGGGCEEEEEE--CSSCEEEEET----TCCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCCCCCEEEEEEE--CCCEEEEEEC----CCCEEEEECCCCCCCEEECCCCC-CEEEEEEECCCCEEEEEECCCCEEEEE
T ss_conf 8876640689997--3887999958----99689996889974469837888-889999918999899995898499997
Q ss_pred CCCCCEEEEEECCCCCCCCCEEEEECCCCEEEEEECCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89991489991689999814699907999999997899399999789740010025873344579999989997533445
Q 001534 617 MDNMNMLTTVDADGGLPASPRLRFNKEGSLLAVTTSDNGIKILANSDGVRLLRMLEGRAMDKNRCPSEPISSKPLTINAL 696 (1058)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 696 (1058)
+.+++....+. ..+...+.+++|++++ .+++++.|+.+++|+...+. .....
T Consensus 353 ~~~~~~~~~~~-~~h~~~v~~~~~s~~~-~l~s~s~d~~v~~w~~~~~~-~~~~~------------------------- 404 (611)
T 1nr0_A 353 ISTGISNRVFP-DVHATMITGIKTTSKG-DLFTVSWDDHLKVVPAGGSG-VDSSK------------------------- 404 (611)
T ss_dssp TTTCCEEECSS-CSCSSCEEEEEECTTS-CEEEEETTTEEEEECSSSSS-SCTTS-------------------------
T ss_pred CCCCCEEEECC-CCCCCEEEEEEECCCC-CEEEEECCCCEEEEECCCCC-CCCCC-------------------------
T ss_conf 88792563216-6776507899987899-69999848966895468854-35652-------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEE
Q ss_conf 88765432247988999999998434545778876666776543334455322135776786630388638975767659
Q 001534 697 GPASNVSAAIAPTLERPDRGPPAVSISSLGTIDGSRLVDVKPRVAEDVDKIKSWRIPDISDPSQIKALRLPDSIAASKVV 776 (1058)
Q Consensus 697 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~i~ 776 (1058)
..... ......
T Consensus 405 ----------------------------------------------------------------~~~~~-----~~~~~~ 415 (611)
T 1nr0_A 405 ----------------------------------------------------------------AVANK-----LSSQPL 415 (611)
T ss_dssp ----------------------------------------------------------------CCEEE-----CSSCEE
T ss_pred ----------------------------------------------------------------EEEEE-----CCCCCC
T ss_conf ----------------------------------------------------------------12001-----489970
Q ss_pred EEEECCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEE
Q ss_conf 99991687458883125628998825678798874223456500379998731146688999999845999716996999
Q 001534 777 RLIYTNSGLSLLALASNAVHKLWKWQRTERNPSGKATANVAPQLWQPPSGTLMTNDINESKPTEESAACIALSKNDSYVM 856 (1058)
Q Consensus 777 ~l~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~h~~~~i~~i~~s~d~~~la 856 (1058)
.++|+|++..++++ .++.+.+|+.. .... +. | ...+.+++|+||+++||
T Consensus 416 ~~~~s~dg~~~~~~-~~~~v~~~~~~------------------------~~~~--~~---~-~~~v~~va~spdg~~la 464 (611)
T 1nr0_A 416 GLAVSADGDIAVAA-CYKHIAIYSHG------------------------KLTE--VP---I-SYNSSCVALSNDKQFVA 464 (611)
T ss_dssp EEEECTTSSCEEEE-ESSEEEEEETT------------------------EEEE--EE---C-SSCEEEEEECTTSCEEE
T ss_pred EEEEECCCCEEEEE-ECCEEEEEECC------------------------CEEE--EE---C-CCCCEEEEEECCCCEEE
T ss_conf 79980799699999-67639998489------------------------4346--40---6-88954999928998999
Q ss_pred EEE-CCEEEEEECCCCEE--EEEECCCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCC-CEEEEE--EECCCCCEEEE
Q ss_conf 981-99399998778608--9995079888489998079998899984897099999315-536788--81777986899
Q 001534 857 SAS-GGKVSLFNMMTFKV--MTMFMSPPPAATFLAFHPQDNNIIAIGMEDSSVQIYNVRV-DEVKTK--LKGHQNRITGL 930 (1058)
Q Consensus 857 ~~s-dg~i~iwd~~~~~~--~~~~~~~~~~i~~l~~s~~~~~~lasg~~dg~I~iwd~~~-~~~~~~--l~~h~~~v~~l 930 (1058)
+++ |++|++|++.++.. ... .+|...|++++|+| ++++|++++.|++|++|++.+ +++... +.+|...|.++
T Consensus 465 sgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fsp-dg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v 542 (611)
T 1nr0_A 465 VGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSN-NGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACV 542 (611)
T ss_dssp EEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECT-TSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEE
T ss_pred EECCCCEEEEEECCCCCEEEEEC-CCCCCCEEEEEECC-CCCEEEEECCCCCEEEEECCCCCCEEEEEEEEECCCCEEEE
T ss_conf 96899739999945992224101-57788607999989-99989999489989998857787223210264046642589
Q ss_pred EECCCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCC-CCCCCCEEEEEECCCCCEEEEE-ECCEEEEEECC
Q ss_conf 9958999899993899199996898740010243257898-9999780389996899699999-49919999189
Q 001534 931 AFSPTLNALVSSGADAQLCMWSIDKWEKLKSRFIQAPAGR-QSPLVGETKVQFHNDQTHLLVV-HESQISVYDSK 1003 (1058)
Q Consensus 931 ~~spd~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~fs~d~~~l~~~-~d~~i~iwd~~ 1003 (1058)
+|+||+++|++++.|++|++|++++++.. ......+| . ..|.+++|+||++ |+++ .|++|++|++.
T Consensus 543 ~fspdg~~lasgs~D~~v~lW~~~~~~~~---~~~~~~~h~~---~~v~~v~fs~d~~-l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 543 SWSPDNVRLATGSLDNSVIVWNMNKPSDH---PIIIKGAHAM---SSVNSVIWLNETT-IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTCTTSC---CEEETTSSTT---SCEEEEEEEETTE-EEEEETTSCEEEEECC
T ss_pred EECCCCCEEEEEECCCCEEEEECCCCCCC---CCHHHCCCCC---CCEEEEEECCCCE-EEEECCCCCEEEEECC
T ss_conf 98998997999979972999978875556---3264446765---6711899858997-9995288778998444
No 7
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=1.00 E-value=1 Score=500.48 Aligned_cols=554 Identities=10% Similarity=0.178 Sum_probs=465.1
Q ss_pred CCCCEEEEEEECCCCEEEEEEECCCCEEEEECCCC----CCCCCCCCEEECCCCCCCCCCCCCCCCCCCC-EEEEEECC-
Q ss_conf 89973699981599729999927882999983676----5334575121013334532101013678867-38999889-
Q 001534 345 QGSNVMSMDFHPQQQTILLVGTNVGDISLWEVGSR----ERLAHKPFKVWDISAASMPLQNALLNDAAIS-VNRCVWGP- 418 (1058)
Q Consensus 345 h~~~V~~~~fspdg~~lla~g~~dg~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~i~~sp- 418 (1058)
|.+.|++++|+|+++ ++++++ ++.|.+|++.++ +.... +.+|... |++++|+|
T Consensus 17 ~~~~v~~~~~spdg~-~l~~~~-~~~v~v~~~~~~~~~~~~~~~-------------------~~~h~~~~v~~~~~sp~ 75 (615)
T 1pgu_A 17 QRNFTTHLSYDPTTN-AIAYPC-GKSAFVRCLDDGDSKVPPVVQ-------------------FTGHGSSVVTTVKFSPI 75 (615)
T ss_dssp CTTCCCCCEEETTTT-EEEEEE-TTEEEEEECCSSCCSSCSEEE-------------------ECTTTTSCEEEEEECSS
T ss_pred CCCCEEEEEECCCCC-EEEEEC-CCEEEEEECCCCCCCCCCCEE-------------------EECCCCCEEEEEEECCC
T ss_conf 658536899889999-799935-984999977788776514318-------------------80578844999997967
Q ss_pred -CCCEEEEEECCCEEEEEEECCCC-----CEEEEEEEECCCCCEEEEEEECCCCCEEEEEECCC----CCEEEEECCCCC
Q ss_conf -99989999699959999805998-----20001453057678678999449993699998289----939999857881
Q 001534 419 -DGLMLGVAFSKHIVHLYTYNPTG-----ELRQHLEIDAHVGGVNDIAFAHPNKQLCIVTCGDD----KMIKVWDVVAGR 488 (1058)
Q Consensus 419 -d~~~la~~~~d~~i~iwd~~~~~-----~~~~~~~~~~h~~~v~~i~fs~~~~~~~l~s~~~d----~~i~iwd~~~~~ 488 (1058)
++++|++++.|+.|++|++.++. .......+..|...|.+++|+|+++ ++++++.+ +.|.+|| .++
T Consensus 76 ~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~~~~~~~~~~v~~~d--~~~ 151 (615)
T 1pgu_A 76 KGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGR--RLCVVGEGRDNFGVFISWD--SGN 151 (615)
T ss_dssp TTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSS--EEEEEECCSSCSEEEEETT--TCC
T ss_pred CCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCCEEEEEEECCCC--EEEEECCCCCCCCEEEEEE--CCC
T ss_conf 899889996489879997688876554455420001112566379999907999--8999316877755799997--898
Q ss_pred EEEEEECCCCCEEEEEECCCCCCCEEEEEECCCEEEEEECCCCCCEEEECCCCC---CEEEEEECCC-CCEEEEEECCCC
Q ss_conf 468740888985799730468932999990799099996788981479508999---4799998689-997999702878
Q 001534 489 KQYTFEGHEAPVYSVCPHHKESIQFIFSTAIDGKIKAWLYDYLGSRVDYDAPGN---WCTMMAYSAD-GTRLFSCGTSKE 564 (1058)
Q Consensus 489 ~~~~l~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---~v~~i~~s~~-~~~l~~~~~~~~ 564 (1058)
.+..+.+|...|.+++|+++.. ..+++++.|+.|++||+.+.+....+..+.. .+.+++|+|+ ++++++++.
T Consensus 152 ~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--- 227 (615)
T 1pgu_A 152 SLGEVSGHSQRINACHLKQSRP-MRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS--- 227 (615)
T ss_dssp EEEECCSCSSCEEEEEECSSSS-CEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEET---
T ss_pred CCEEEECCCCCEEEEEECCCCC-CEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCCCEEEEEEC---
T ss_conf 1031306774388999887899-689999579959999699961013202567777428999978977888999868---
Q ss_pred CCCEEEEEECCCCCEEEEE-C---CCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCC--CCCCCEE
Q ss_conf 9860999647988146764-1---77887636999858999999983899099997899914899916899--9981469
Q 001534 565 GESHLVEWNESEGAIKRTY-S---GFRKRSLGVVQFDTTRNRFLAAGDEFQIKFWDMDNMNMLTTVDADGG--LPASPRL 638 (1058)
Q Consensus 565 ~~~~i~iwd~~~~~~~~~~-~---~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~v~~~ 638 (1058)
++.|++||+.+++.+..+ . .|.. .+.+++|+ ++.++++++.|+.|++||+.+++.+..+..+.. ...+.++
T Consensus 228 -dg~i~vwd~~~~~~~~~~~~~~~~~~~-~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 304 (615)
T 1pgu_A 228 -DRKISCFDGKSGEFLKYIEDDQEPVQG-GIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGV 304 (615)
T ss_dssp -TCCEEEEETTTCCEEEECCBTTBCCCS-CEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEE
T ss_pred -CCEEEEEECCCCCEEEEECCCCCCCCC-CEEEEEEC-CCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEE
T ss_conf -980899989999785895254445677-55899981-899799984899489997888927878847877545714699
Q ss_pred EEECCCCEEEEEECCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99079999999978993999997897400100258733445799999899975334458876543224798899999999
Q 001534 639 RFNKEGSLLAVTTSDNGIKILANSDGVRLLRMLEGRAMDKNRCPSEPISSKPLTINALGPASNVSAAIAPTLERPDRGPP 718 (1058)
Q Consensus 639 ~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 718 (1058)
.|. ++.++++++.+|.|++|++.++ .....+.+|...+..+
T Consensus 305 ~~~-~~~~l~~~~~~g~i~~~d~~~~-~~~~~~~~~~~~v~~~------------------------------------- 345 (615)
T 1pgu_A 305 VAT-GNGRIISLSLDGTLNFYELGHD-EVLKTISGHNKGITAL------------------------------------- 345 (615)
T ss_dssp EEE-ETTEEEEEETTSCEEEEETTEE-EEEEEECCCSSCEEEE-------------------------------------
T ss_pred EEC-CCCEEEEEECCCCEEEEECCCC-CEEEEEECCCCCEEEE-------------------------------------
T ss_conf 918-9976999978997899988899-2889994777878999-------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCEEEE
Q ss_conf 84345457788766667765433344553221357767866303886389757676599999168745888312562899
Q 001534 719 AVSISSLGTIDGSRLVDVKPRVAEDVDKIKSWRIPDISDPSQIKALRLPDSIAASKVVRLIYTNSGLSLLALASNAVHKL 798 (1058)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~i~i 798 (1058)
.+ ++ +++++.++.+++|++. .+. ..|...|.+++| +++..+++++.|+.+++
T Consensus 346 ------------~~-~~--l~~~~~dg~i~~w~~~---------~~~---~~~~~~v~~~~~-~~~~~l~~~~~d~~i~~ 397 (615)
T 1pgu_A 346 ------------TV-NP--LISGSYDGRIMEWSSS---------SMH---QDHSNLIVSLDN-SKAQEYSSISWDDTLKV 397 (615)
T ss_dssp ------------ET-TT--TEEEETTSCEEETTTT---------EEE---CCCCSCEEEEEC-CSTTCCEEEETTTEEEE
T ss_pred ------------EE-CC--CEEECCCCEEEEEECH---------HHC---CCCCCCEEEEEE-CCCCEEEEEECCCCEEE
T ss_conf ------------95-67--4898799959998752---------415---755685179997-89867999958997999
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCEEEEEECCCCEEEEEEC
Q ss_conf 88256787988742234565003799987311466889999998459997169969999819939999877860899950
Q 001534 799 WKWQRTERNPSGKATANVAPQLWQPPSGTLMTNDINESKPTEESAACIALSKNDSYVMSASGGKVSLFNMMTFKVMTMFM 878 (1058)
Q Consensus 799 w~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~h~~~~i~~i~~s~d~~~la~~sdg~i~iwd~~~~~~~~~~~ 878 (1058)
|++..... ...+.+++++|++.+++++.++.+.+|+..+++.+..+.
T Consensus 398 ~~~~~~~~---------------------------------~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (615)
T 1pgu_A 398 NGITKHEF---------------------------------GSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVR 444 (615)
T ss_dssp TTEEEEEC---------------------------------SSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EECCCCCC---------------------------------CCCCEEEEECCCCCEEEEECCCCEEEEECCCCCEEEECC
T ss_conf 88666763---------------------------------678469998289878999679826999446786655515
Q ss_pred CCCCCEEEEEEECCCCCEEEEEEC-CCEEEEEECCCCEEE-EEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCC
Q ss_conf 798884899980799988999848-970999993155367-888177798689999589998999938991999968987
Q 001534 879 SPPPAATFLAFHPQDNNIIAIGME-DSSVQIYNVRVDEVK-TKLKGHQNRITGLAFSPTLNALVSSGADAQLCMWSIDKW 956 (1058)
Q Consensus 879 ~~~~~i~~l~~s~~~~~~lasg~~-dg~I~iwd~~~~~~~-~~l~~h~~~v~~l~~spd~~~l~s~s~D~~i~iwd~~~~ 956 (1058)
+...+.+++|+ ++++++++. |+.|++|++.+++.. ..+.+|...|++++|+|++++|++++.|+.|++|++.++
T Consensus 445 -~~~~~~~~~~~---~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 520 (615)
T 1pgu_A 445 -LNSPGSAVSLS---QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSR 520 (615)
T ss_dssp -CSSCEEEEEEC---SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred -CCCCCEEEEEC---CCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCEEEEEECCCC
T ss_conf -67872077883---88899965689869999888854353336776575079999899998998179985998657777
Q ss_pred CCCCCEEEECCCC-CCCCCCCEEEEEECC----------CCCEEEEE-ECCEEEEEEC-CC-CEEEEEEE--CCCCCEEE
Q ss_conf 4001024325789-899997803899968----------99699999-4991999918-99-70158841--21011687
Q 001534 957 EKLKSRFIQAPAG-RQSPLVGETKVQFHN----------DQTHLLVV-HESQISVYDS-KL-ECSRSVSF--LSLCPYVF 1020 (1058)
Q Consensus 957 ~~~~~~~~~~~~~-~~~~~~~v~~~~fs~----------d~~~l~~~-~d~~i~iwd~-~~-~~~~~~~~--~~~~~~~~ 1020 (1058)
+.. ....+ |. ..|.+++|+| ++++|+++ .|+.|++|++ ++ .++..+.. ..+..+.|
T Consensus 521 ~~~-----~~~~~~h~---~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~ 592 (615)
T 1pgu_A 521 EVK-----TSRWAFRT---SKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLW 592 (615)
T ss_dssp EEE-----ECCSCCCS---SCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEE
T ss_pred CCE-----EEEECCCC---CCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCEECHHHHCCCCCEEEEEE
T ss_conf 624-----67604788---7146999768323453324688889998179719999778885403113359430589997
Q ss_pred CCCCCEEEEEECCCEEEEECCCC
Q ss_conf 12992999998898199972999
Q 001534 1021 GVSSIFLLSTLTKLSVAVHDPLM 1043 (1058)
Q Consensus 1021 s~~~~~l~~~~~d~~v~v~~~~~ 1043 (1058)
+++++ |++++.|+.|++|++..
T Consensus 593 s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 593 ETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp EETTE-EEEEETTSCEEEEEEC-
T ss_pred CCCCC-EEEECCCCEEEEEEEEC
T ss_conf 38997-28845996399996015
No 8
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=488.92 Aligned_cols=634 Identities=10% Similarity=0.079 Sum_probs=437.5
Q ss_pred EEEECCCCCEEEEEEECCCCEEEEEEECCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf 68602899736999815997299999278829999836765334575121013334532101013678867389998899
Q 001534 340 VRTLNQGSNVMSMDFHPQQQTILLVGTNVGDISLWEVGSRERLAHKPFKVWDISAASMPLQNALLNDAAISVNRCVWGPD 419 (1058)
Q Consensus 340 ~~~~~h~~~V~~~~fspdg~~lla~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~spd 419 (1058)
.....|.+.|++++|+|+++ ++|+|+.||.|+||+..+.+... ...|...|.+++|+|
T Consensus 11 ~~~~gh~~~V~~lafspdg~-~lAsgs~Dg~I~lw~~~~~~~~~--------------------~~~~~~~V~~l~fsp- 68 (902)
T 2oaj_A 11 TNKYGMSSKPIAAAFDFTQN-LLAIATVTGEVHIYGQQQVEVVI--------------------KLEDRSAIKEMRFVK- 68 (902)
T ss_dssp EEEEECSSCEEEEEEETTTT-EEEEEETTSEEEEECSTTCEEEE--------------------ECSSCCCEEEEEEET-
T ss_pred CCCCCCCCCCEEEEECCCCC-EEEEEECCCEEEEEECCCCEEEE--------------------ECCCCCCEEEEEECC-
T ss_conf 02168899848999979999-89999297989999689947999--------------------868999779999908-
Q ss_pred CCEEEEEECCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEE---------
Q ss_conf 99899996999599998059982000145305767867899944999369999828993999985788146---------
Q 001534 420 GLMLGVAFSKHIVHLYTYNPTGELRQHLEIDAHVGGVNDIAFAHPNKQLCIVTCGDDKMIKVWDVVAGRKQ--------- 490 (1058)
Q Consensus 420 ~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~fs~~~~~~~l~s~~~d~~i~iwd~~~~~~~--------- 490 (1058)
+++|++++.|+.|++||+.+++.+. .+. |...|++++|+|+++ ++++|+.||.|++||+.+++..
T Consensus 69 g~~L~S~s~D~~v~lWd~~~~~~~~---~~~-~~~~V~~v~~sp~g~--~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~ 142 (902)
T 2oaj_A 69 GIYLVVINAKDTVYVLSLYSQKVLT---TVF-VPGKITSIDTDASLD--WMLIGLQNGSMIVYDIDRDQLSSFKLDNLQK 142 (902)
T ss_dssp TTEEEEEETTCEEEEEETTTCSEEE---EEE-CSSCEEEEECCTTCS--EEEEEETTSCEEEEETTTTEEEEEEECCHHH
T ss_pred CCEEEEEECCCEEEEEECCCCCEEE---EEC-CCCCEEEEEECCCCC--EEEEECCCCCEEEEECCCCCCCCCEECCCCC
T ss_conf 9889999895959999899996899---974-899879999879999--8999949992999999999626503043210
Q ss_pred --EEEECCCCCEEEEEECCCCCCCEEEEEECCCEEEEEECCCCCCEEEECCC------------------CCCEEEEEEC
Q ss_conf --87408889857997304689329999907990999967889814795089------------------9947999986
Q 001534 491 --YTFEGHEAPVYSVCPHHKESIQFIFSTAIDGKIKAWLYDYLGSRVDYDAP------------------GNWCTMMAYS 550 (1058)
Q Consensus 491 --~~l~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~------------------~~~v~~i~~s 550 (1058)
..+.+|...|.+++|+|. ++..+++++.|+.| +||+++......+..+ ...|.+++|+
T Consensus 143 ~~~~~~~h~~~V~sl~~sp~-~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fs 220 (902)
T 2oaj_A 143 SSFFPAARLSPIVSIQWNPR-DIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYH 220 (902)
T ss_dssp HHTCSSSCCCCCCEEEEETT-EEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEEC
T ss_pred CCCCCCCCCCCEEEEEECCC-CCCEEEEEECCCCE-EEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
T ss_conf 00254457897389997669-99989999189849-99877896579983355776777654433234567776899985
Q ss_pred CCCCEEEEEECCCCCCCEEEEEECCCCCEEEE--EC---CC------------CCCCEEEEEEC----CCC-CEEEEEEC
Q ss_conf 89997999702878986099964798814676--41---77------------88763699985----899-99999838
Q 001534 551 ADGTRLFSCGTSKEGESHLVEWNESEGAIKRT--YS---GF------------RKRSLGVVQFD----TTR-NRFLAAGD 608 (1058)
Q Consensus 551 ~~~~~l~~~~~~~~~~~~i~iwd~~~~~~~~~--~~---~~------------~~~~i~~~~~~----~~~-~~l~~~~~ 608 (1058)
|++.++++++. |+.|++||+++++++.. +. .| ....|.+++|+ |++ ..+++++.
T Consensus 221 pdg~~lasgs~----Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~ 296 (902)
T 2oaj_A 221 PNSLHIITIHE----DNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKS 296 (902)
T ss_dssp TTSSEEEEEET----TCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEEC
T ss_pred CCCCEEEEEEC----CCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCC
T ss_conf 99999999989----99399998789968888850123457877767888855567745799973499988789996887
Q ss_pred C-----CEEEEEECC------------------CCCEEEEEECCCCCCCCCEEEEEC----------CCCEEEEEECCCC
Q ss_conf 9-----909999789------------------991489991689999814699907----------9999999978993
Q 001534 609 E-----FQIKFWDMD------------------NMNMLTTVDADGGLPASPRLRFNK----------EGSLLAVTTSDNG 655 (1058)
Q Consensus 609 d-----g~i~iwd~~------------------~~~~~~~~~~~~~~~~v~~~~~s~----------~~~~l~~~~~dg~ 655 (1058)
+ ..+.+|++. +.+....+... +...+..+.+.+ +...+++++.||.
T Consensus 297 ~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~ 375 (902)
T 2oaj_A 297 ISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLP-TNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGE 375 (902)
T ss_dssp STTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCS-SSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSC
T ss_pred CCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEECC-CCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCC
T ss_conf 77788852899954789875554255654664174522787418-99954799997788988677878506999917984
Q ss_pred EEEEECCCCCEEEECCC------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCC
Q ss_conf 99999789740010025------8733445799999899975334458876543224798899-9999998434545778
Q 001534 656 IKILANSDGVRLLRMLE------GRAMDKNRCPSEPISSKPLTINALGPASNVSAAIAPTLER-PDRGPPAVSISSLGTI 728 (1058)
Q Consensus 656 i~iw~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 728 (1058)
+++|++.++........ .|...+..+ .+. ....++|...... .....+...... ...
T Consensus 376 l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~----------~~s-----~~~~~~w~~~~~~~~~~~~~l~G~~~-~v~ 439 (902)
T 2oaj_A 376 IETMLYPSGIFTDKASLFPQNLSWLRPLATTS----------MAA-----SVPNKLWLGALSAAQNKDYLLKGGVR-TKR 439 (902)
T ss_dssp EEEEETTTCCEECCGGGSCGGGTTBTTBEEEE----------EEE-----EEEHHHHHHHHHTTBCCCCSCCCSBC-CCC
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCEEEE----------EEE-----ECCHHHHHHHHHCCCCCCCCCCCCCC-CCC
T ss_conf 89997899985565556898522358972489----------999-----74999998888604699975457857-787
Q ss_pred CCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCC-CEEEEECC---CCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCC
Q ss_conf 87666677654333-44553221357767866-30388638---975767659999916874588831256289988256
Q 001534 729 DGSRLVDVKPRVAE-DVDKIKSWRIPDISDPS-QIKALRLP---DSIAASKVVRLIYTNSGLSLLALASNAVHKLWKWQR 803 (1058)
Q Consensus 729 ~~~~~~~~~~~~~~-~~~~i~~w~~~~~~~~~-~~~~~~~~---~~~~~~~i~~l~~s~~g~~l~~~~~dg~i~iw~~~~ 803 (1058)
...+++++..++++ .|++|++|++....... ......+. ..+|...|.+++|+|+++.|++++.||++++|++..
T Consensus 440 sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~ 519 (902)
T 2oaj_A 440 QKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEV 519 (902)
T ss_dssp CCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEE
T ss_pred CCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEEECHHHCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEEECC
T ss_conf 53336667589996589838999787764567736775015413778887646999638999699994585799999248
Q ss_pred CCCCCC-------C-CC------CCCCC---CCCC-----CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEE-C
Q ss_conf 787988-------7-42------23456---5003-----79998731146688999999845999716996999981-9
Q 001534 804 TERNPS-------G-KA------TANVA---PQLW-----QPPSGTLMTNDINESKPTEESAACIALSKNDSYVMSAS-G 860 (1058)
Q Consensus 804 ~~~~~~-------~-~~------~~~~~---~~l~-----~~~~~~~~~~~~~~~~h~~~~i~~i~~s~d~~~la~~s-d 860 (1058)
..+... . .. ..... ..+. .+..+......+.+ | .+.|++++||||| +||+|+ |
T Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~--h-~~~V~svafSpdG-~lAsgs~D 595 (902)
T 2oaj_A 520 NQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHA--N-KGKTSAINNSNIG-FVGIAYAA 595 (902)
T ss_dssp CCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECC--C-SCSEEEEEECBTS-EEEEEETT
T ss_pred CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC--C-CCCEEEEEECCCC-EEEEEECC
T ss_conf 655575455778665113455134679654322423689887776014699986--8-8867799964876-89999589
Q ss_pred CEEEEEECCCCEEEE--E---EC-CCCCCEEEEEEE-----CCCC---CEEEEEECCCEEEEEEC---CCCEEEEEEECC
Q ss_conf 939999877860899--9---50-798884899980-----7999---88999848970999993---155367888177
Q 001534 861 GKVSLFNMMTFKVMT--M---FM-SPPPAATFLAFH-----PQDN---NIIAIGMEDSSVQIYNV---RVDEVKTKLKGH 923 (1058)
Q Consensus 861 g~i~iwd~~~~~~~~--~---~~-~~~~~i~~l~~s-----~~~~---~~lasg~~dg~I~iwd~---~~~~~~~~l~~h 923 (1058)
++|++||+.+...+. . +. +|...|++++|+ | |+ ++|++|+.|++|++||+ .+|++...+.+|
T Consensus 596 ~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~-Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~ 674 (902)
T 2oaj_A 596 GSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGD-DGYSSILMVCGTDMGEVITYKILPASGGKFDVQLMDI 674 (902)
T ss_dssp SEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTT-SSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEEEEE
T ss_pred CCEEEEECCCCEEEEEEEHHHHCCCCCCCEEEEEEEEEECCC-CCCCCEEEEEEECCCCEEEEEEECCCCCCEEEEECCC
T ss_conf 769999888983999702467264666613999999984178-9876338999956873999999558998689996672
Q ss_pred C-----CCEEEEE-EC----------------------CCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCCCCCC
Q ss_conf 7-----9868999-95----------------------899989999389919999689874001024325789899997
Q 001534 924 Q-----NRITGLA-FS----------------------PTLNALVSSGADAQLCMWSIDKWEKLKSRFIQAPAGRQSPLV 975 (1058)
Q Consensus 924 ~-----~~v~~l~-~s----------------------pd~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 975 (1058)
. ++|..++ |+ +++..|+++ +..|++|++.++++.+.. .+|. .
T Consensus 675 ~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~--~~~ir~~~~~~~k~~~k~-----~~~~---~ 744 (902)
T 2oaj_A 675 TNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG--FDDIRLITLGKSKSTHKG-----FKYP---L 744 (902)
T ss_dssp EECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC--SSEEEEECTTCCCEEEEE-----CSSC---E
T ss_pred EECCCCCCEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCEEEEEEE--CCCEEEEECCCCCCEEEE-----CCCC---E
T ss_conf 44078896479985866879736688789725577887773999993--540599967533512367-----2562---0
Q ss_pred CEEEE---E------ECCCCCEEEEE-ECCEEEEEEC-CCCEEEEEEECC------CCCEEECCCCCEEEEEECCCEEEE
Q ss_conf 80389---9------96899699999-4991999918-997015884121------011687129929999988981999
Q 001534 976 GETKV---Q------FHNDQTHLLVV-HESQISVYDS-KLECSRSVSFLS------LCPYVFGVSSIFLLSTLTKLSVAV 1038 (1058)
Q Consensus 976 ~v~~~---~------fs~d~~~l~~~-~d~~i~iwd~-~~~~~~~~~~~~------~~~~~~s~~~~~l~~~~~d~~v~v 1038 (1058)
.+..+ . |++++..|++. .||.|++|++ +++++....... ....+|...|..++-.+. .++.+
T Consensus 745 ~~~~v~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~s~p~l~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~e~~~ 823 (902)
T 2oaj_A 745 AATGLSYISTVEKNNDRKNLTVIITLEINGHLRVFTIPDFKEQMSEHIPFPIAAKYITESSVLRNGDIAIRVSE-FQASL 823 (902)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEEEETTSEEEEEETTTCCEEEEEECSSCCCHHHHTTCEECTTSCEEEECSS-SEEEE
T ss_pred EEEEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEEECH-HHEEE
T ss_conf 14477788701355544673699999279959999785647784165886024464320289689889998270-26489
Q ss_pred EC
Q ss_conf 72
Q 001534 1039 HD 1040 (1058)
Q Consensus 1039 ~~ 1040 (1058)
..
T Consensus 824 ~~ 825 (902)
T 2oaj_A 824 FS 825 (902)
T ss_dssp EE
T ss_pred EE
T ss_conf 99
No 9
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=1.00 E-value=1 Score=478.44 Aligned_cols=527 Identities=15% Similarity=0.205 Sum_probs=427.9
Q ss_pred CEEEEEC-CCCC-EEEEEEEC--CCCEEEEEEECCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 2568602-8997-36999815--997299999278829999836765334575121013334532101013678867389
Q 001534 338 TVVRTLN-QGSN-VMSMDFHP--QQQTILLVGTNVGDISLWEVGSRERLAHKPFKVWDISAASMPLQNALLNDAAISVNR 413 (1058)
Q Consensus 338 ~~~~~~~-h~~~-V~~~~fsp--dg~~lla~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 413 (1058)
+....+. |... |++++|+| +++ ++++|+.||.|++|++.+++...... ......+..|...|.+
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~-~l~s~~~dg~v~vw~~~~~~~~~~~~-----------~~~~~~~~~~~~~v~~ 121 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQ-YLCSGDESGKVIVWGWTFDKESNSVE-----------VNVKSEFQVLAGPISD 121 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCC-EEEEEETTSEEEEEEEEEEGGGTEEE-----------EEEEEEEECCSSCEEE
T ss_pred CCCEEEECCCCCEEEEEEECCCCCCC-EEEEECCCCEEEEEECCCCCCCCCCC-----------CCCCCHHHCCCCCEEE
T ss_conf 14318805788449999979678998-89996489879997688876554455-----------4200011125663799
Q ss_pred EEECCCCCEEEEEECC----CEEEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCCCCE
Q ss_conf 9988999989999699----959999805998200014530576786789994499936999982899399998578814
Q 001534 414 CVWGPDGLMLGVAFSK----HIVHLYTYNPTGELRQHLEIDAHVGGVNDIAFAHPNKQLCIVTCGDDKMIKVWDVVAGRK 489 (1058)
Q Consensus 414 i~~spd~~~la~~~~d----~~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~fs~~~~~~~l~s~~~d~~i~iwd~~~~~~ 489 (1058)
++|+|++++|++++.+ +.|.+|+ .++... .+.+|...|.+++|+|+++. ++++++.|+.|++||+.+++.
T Consensus 122 ~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~---~~~~~~~~v~~~~~~~~~~~-~l~~~~~d~~v~vwd~~~~~~ 195 (615)
T 1pgu_A 122 ISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLG---EVSGHSQRINACHLKQSRPM-RSMTVGDDGSVVFYQGPPFKF 195 (615)
T ss_dssp EEECTTSSEEEEEECCSSCSEEEEETT--TCCEEE---ECCSCSSCEEEEEECSSSSC-EEEEEETTTEEEEEETTTBEE
T ss_pred EEEECCCCEEEEECCCCCCCCEEEEEE--CCCCCE---EEECCCCCEEEEEECCCCCC-EEEEEECCCCEEEEECCCCCE
T ss_conf 999079998999316877755799997--898103---13067743889998878996-899995799599996999610
Q ss_pred EEEEECCCC---CEEEEEECCCCCCCEEEEEECCCEEEEEECCCCCCEEEE-C---CCCCCEEEEEECCCCCEEEEEECC
Q ss_conf 687408889---857997304689329999907990999967889814795-0---899947999986899979997028
Q 001534 490 QYTFEGHEA---PVYSVCPHHKESIQFIFSTAIDGKIKAWLYDYLGSRVDY-D---APGNWCTMMAYSADGTRLFSCGTS 562 (1058)
Q Consensus 490 ~~~l~~~~~---~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~---~~~~~v~~i~~s~~~~~l~~~~~~ 562 (1058)
+..+.+|.. .|.+++|+|+ ++.++++++.|+.|++||+.+++....+ . .+...+.++.|+ ++.++++++.
T Consensus 196 ~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~- 272 (615)
T 1pgu_A 196 SASDRTHHKQGSFVRDVEFSPD-SGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGA- 272 (615)
T ss_dssp EEEECSSSCTTCCEEEEEECST-TCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEET-
T ss_pred EEEECCCCCCCCEEEEEEECCC-CCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEC-CCCEEEEECC-
T ss_conf 1320256777742899997897-788899986898089998999978589525444567755899981-8997999848-
Q ss_pred CCCCCEEEEEECCCCCEEEEECCCC---CCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCEEE
Q ss_conf 7898609996479881467641778---8763699985899999998389909999789991489991689999814699
Q 001534 563 KEGESHLVEWNESEGAIKRTYSGFR---KRSLGVVQFDTTRNRFLAAGDEFQIKFWDMDNMNMLTTVDADGGLPASPRLR 639 (1058)
Q Consensus 563 ~~~~~~i~iwd~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 639 (1058)
++.+++||+.+++.+..+..+. ...+.++.+. ++.++++++.++.|++||+.+++.+..+..+.. .+.+++
T Consensus 273 ---d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~--~v~~~~ 346 (615)
T 1pgu_A 273 ---DATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNK--GITALT 346 (615)
T ss_dssp ---TSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSS--CEEEEE
T ss_pred ---CCCEEEEECCCCCEEEEECCCCCCCCCCEEEEEEC-CCCEEEEEECCCCEEEEECCCCCEEEEEECCCC--CEEEEE
T ss_conf ---99489997888927878847877545714699918-997699997899789998889928899947778--789999
Q ss_pred EECCCCEEEEEECCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 90799999999789939999978974001002587334457999998999753344588765432247988999999998
Q 001534 640 FNKEGSLLAVTTSDNGIKILANSDGVRLLRMLEGRAMDKNRCPSEPISSKPLTINALGPASNVSAAIAPTLERPDRGPPA 719 (1058)
Q Consensus 640 ~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 719 (1058)
| |+ +++++.||.|++|++. .+. ..|...+..+
T Consensus 347 ~-~~---l~~~~~dg~i~~w~~~----~~~--~~~~~~v~~~-------------------------------------- 378 (615)
T 1pgu_A 347 V-NP---LISGSYDGRIMEWSSS----SMH--QDHSNLIVSL-------------------------------------- 378 (615)
T ss_dssp T-TT---TEEEETTSCEEETTTT----EEE--CCCCSCEEEE--------------------------------------
T ss_pred E-CC---CEEECCCCEEEEEECH----HHC--CCCCCCEEEE--------------------------------------
T ss_conf 5-67---4898799959998752----415--7556851799--------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEE
Q ss_conf 43454577887666677654333445532213577678663038863897576765999991687458883125628998
Q 001534 720 VSISSLGTIDGSRLVDVKPRVAEDVDKIKSWRIPDISDPSQIKALRLPDSIAASKVVRLIYTNSGLSLLALASNAVHKLW 799 (1058)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~i~iw 799 (1058)
.+.++...++++.++.+++|++..... ...+..++++|++..++++ .++.+.+|
T Consensus 379 -----------~~~~~~~l~~~~~d~~i~~~~~~~~~~--------------~~~~~~~~~s~~~~~~~~~-~~~~~~~~ 432 (615)
T 1pgu_A 379 -----------DNSKAQEYSSISWDDTLKVNGITKHEF--------------GSQPKVASANNDGFTAVLT-NDDDLLIL 432 (615)
T ss_dssp -----------ECCSTTCCEEEETTTEEEETTEEEEEC--------------SSCEEEEEECSSSEEEEEE-TTSEEEEE
T ss_pred -----------EECCCCEEEEEECCCCEEEEECCCCCC--------------CCCCEEEEECCCCCEEEEE-CCCCEEEE
T ss_conf -----------978986799995899799988666763--------------6784699982898789996-79826999
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEE--CCEEEEEECCCCEEE-EE
Q ss_conf 825678798874223456500379998731146688999999845999716996999981--993999987786089-99
Q 001534 800 KWQRTERNPSGKATANVAPQLWQPPSGTLMTNDINESKPTEESAACIALSKNDSYVMSAS--GGKVSLFNMMTFKVM-TM 876 (1058)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~h~~~~i~~i~~s~d~~~la~~s--dg~i~iwd~~~~~~~-~~ 876 (1058)
+.. ++..... +. | ...+.+++|+ ++++++++ |+.|++|++.+++.. ..
T Consensus 433 ~~~----------------------~~~~~~~-~~---~-~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~~~~~~~ 483 (615)
T 1pgu_A 433 QSF----------------------TGDIIKS-VR---L-NSPGSAVSLS--QNYVAVGLEEGNTIQVFKLSDLEVSFDL 483 (615)
T ss_dssp ETT----------------------TCCEEEE-EE---C-SSCEEEEEEC--SSEEEEEETTTSCEEEEETTEEEEEEEC
T ss_pred ECC----------------------CCCEEEE-CC---C-CCCCEEEEEC--CCEEEEEECCCCEEEEEECCCCCCCCCC
T ss_conf 446----------------------7866555-15---6-7872077883--8889996568986999988885435333
Q ss_pred ECCCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEEEC-CCCCEEEEEECC----------CCCEEEEEECC
Q ss_conf 5079888489998079998899984897099999315536788817-779868999958----------99989999389
Q 001534 877 FMSPPPAATFLAFHPQDNNIIAIGMEDSSVQIYNVRVDEVKTKLKG-HQNRITGLAFSP----------TLNALVSSGAD 945 (1058)
Q Consensus 877 ~~~~~~~i~~l~~s~~~~~~lasg~~dg~I~iwd~~~~~~~~~l~~-h~~~v~~l~~sp----------d~~~l~s~s~D 945 (1058)
+.+|...|++++|+| ++++|++++.||.|++|++.+++++..+.+ |...|++++|+| ++++|++++.|
T Consensus 484 ~~~~~~~v~~~~~s~-~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~d 562 (615)
T 1pgu_A 484 KTPLRAKPSYISISP-SETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLD 562 (615)
T ss_dssp SSCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETT
T ss_pred CCCCCCCEEEEEECC-CCCEEEECCCCCEEEEEECCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCC
T ss_conf 677657507999989-9998998179985998657777624676047887146999768323453324688889998179
Q ss_pred CCEEEEECCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCEEEEE-ECCEEEEEECC
Q ss_conf 91999968987400102432578989999780389996899699999-49919999189
Q 001534 946 AQLCMWSIDKWEKLKSRFIQAPAGRQSPLVGETKVQFHNDQTHLLVV-HESQISVYDSK 1003 (1058)
Q Consensus 946 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~fs~d~~~l~~~-~d~~i~iwd~~ 1003 (1058)
+.|++|++.++.. .+....+|. ..|.+++|+||++ |+++ .|+.|++|++.
T Consensus 563 g~i~iw~~~~~~~----~~~~~~~h~---~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 563 TNIFIYSVKRPMK----IIKALNAHK---DGVNNLLWETPST-LVSSGADACIKRWNVV 613 (615)
T ss_dssp SCEEEEESSCTTC----CEEETTSST---TCEEEEEEEETTE-EEEEETTSCEEEEEEC
T ss_pred CCEEEEECCCCCE----ECHHHHCCC---CCEEEEEECCCCC-EEEECCCCEEEEEEEE
T ss_conf 7199997788854----031133594---3058999738997-2884599639999601
No 10
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=461.76 Aligned_cols=566 Identities=9% Similarity=0.036 Sum_probs=376.2
Q ss_pred CCCCCCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEE
Q ss_conf 36788673899988999989999699959999805998200014530576786789994499936999982899399998
Q 001534 404 LNDAAISVNRCVWGPDGLMLGVAFSKHIVHLYTYNPTGELRQHLEIDAHVGGVNDIAFAHPNKQLCIVTCGDDKMIKVWD 483 (1058)
Q Consensus 404 ~~~h~~~v~~i~~spd~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~fs~~~~~~~l~s~~~d~~i~iwd 483 (1058)
..+|...|++++|+|++++||+|+.||.|++|+..+.+... . ..|..+|++++|+| ++ +|++++.|++|++||
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~---~-~~~~~~V~~l~fsp-g~--~L~S~s~D~~v~lWd 85 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVI---K-LEDRSAIKEMRFVK-GI--YLVVINAKDTVYVLS 85 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEE---E-CSSCCCEEEEEEET-TT--EEEEEETTCEEEEEE
T ss_pred CCCCCCCCEEEEECCCCCEEEEEECCCEEEEEECCCCEEEE---E-CCCCCCEEEEEECC-CC--EEEEEECCCEEEEEE
T ss_conf 16889984899997999989999297989999689947999---8-68999779999908-98--899998959599998
Q ss_pred CCCCCEEEEEECCCCCEEEEEECCCCCCCEEEEEECCCEEEEEECCCCCCE-----------EEECCCCCCEEEEEECCC
Q ss_conf 578814687408889857997304689329999907990999967889814-----------795089994799998689
Q 001534 484 VVAGRKQYTFEGHEAPVYSVCPHHKESIQFIFSTAIDGKIKAWLYDYLGSR-----------VDYDAPGNWCTMMAYSAD 552 (1058)
Q Consensus 484 ~~~~~~~~~l~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-----------~~~~~~~~~v~~i~~s~~ 552 (1058)
+.+++++..+. |...|++++|+| ++.++++++.||.|++||++..... .....|...|.+++|+|+
T Consensus 86 ~~~~~~~~~~~-~~~~V~~v~~sp--~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~ 162 (902)
T 2oaj_A 86 LYSQKVLTTVF-VPGKITSIDTDA--SLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPR 162 (902)
T ss_dssp TTTCSEEEEEE-CSSCEEEEECCT--TCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETT
T ss_pred CCCCCEEEEEC-CCCCEEEEEECC--CCCEEEEECCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEECCC
T ss_conf 99996899974-899879999879--999899994999299999999962650304321000254457897389997669
Q ss_pred C-CEEEEEECCCCCCCEEEEEECCCCCEEEEECCC-----------------CCCCEEEEEECCCCCEEEEEECCCEEEE
Q ss_conf 9-979997028789860999647988146764177-----------------8876369998589999999838990999
Q 001534 553 G-TRLFSCGTSKEGESHLVEWNESEGAIKRTYSGF-----------------RKRSLGVVQFDTTRNRFLAAGDEFQIKF 614 (1058)
Q Consensus 553 ~-~~l~~~~~~~~~~~~i~iwd~~~~~~~~~~~~~-----------------~~~~i~~~~~~~~~~~l~~~~~dg~i~i 614 (1058)
+ ..+++++ .++.+ +||+++++++..+..+ +...+.+++|+|++.++++++.||.|++
T Consensus 163 ~~~~l~~g~----~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~l 237 (902)
T 2oaj_A 163 DIGTVLISY----EYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVF 237 (902)
T ss_dssp EEEEEEEEC----SSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEE
T ss_pred CCCEEEEEE----CCCCE-EEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEE
T ss_conf 999899991----89849-9987789657998335577677765443323456777689998599999999989993999
Q ss_pred EECCCCCEEEEEEC-----C-----------CCCCCCCEEEEEC----CC-CEEEEEECC-----CCEEEEECCCC-C--
Q ss_conf 97899914899916-----8-----------9999814699907----99-999999789-----93999997897-4--
Q 001534 615 WDMDNMNMLTTVDA-----D-----------GGLPASPRLRFNK----EG-SLLAVTTSD-----NGIKILANSDG-V-- 665 (1058)
Q Consensus 615 wd~~~~~~~~~~~~-----~-----------~~~~~v~~~~~s~----~~-~~l~~~~~d-----g~i~iw~~~~~-~-- 665 (1058)
||+.+++.+..... + .+...|.+++|++ ++ ..+++++.+ ..+.+|++... .
T Consensus 238 Wd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~ 317 (902)
T 2oaj_A 238 WDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYS 317 (902)
T ss_dssp EETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGG
T ss_pred EECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCC
T ss_conf 98789968888850123457877767888855567745799973499988789996887777888528999547898755
Q ss_pred --------------EEEECCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf --------------0010025-8733445799999899975334458876543224798899999999843454577887
Q 001534 666 --------------RLLRMLE-GRAMDKNRCPSEPISSKPLTINALGPASNVSAAIAPTLERPDRGPPAVSISSLGTIDG 730 (1058)
Q Consensus 666 --------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (1058)
...+.+. .+...+... ..... .....
T Consensus 318 ~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~------------~~~~~---------------------------~sp~~ 358 (902)
T 2oaj_A 318 ITSYEGMKNYYANPKQMKIFPLPTNVPIVNI------------LPIPR---------------------------QSPYF 358 (902)
T ss_dssp GCCHHHHHHHHHSCSEEEEECCSSSSCEEEE------------EECCS---------------------------SCSHH
T ss_pred CCCHHHHHHHHCCCCCEEEEECCCCCCEEEE------------EECCC---------------------------CCCCC
T ss_conf 5425565466417452278741899954799------------99778---------------------------89886
Q ss_pred CCCCCC-CCCCCCCCCCCCCCCCCCCCCCCC--------------EEEE--------------------ECCCCCCCCCE
Q ss_conf 666677-654333445532213577678663--------------0388--------------------63897576765
Q 001534 731 SRLVDV-KPRVAEDVDKIKSWRIPDISDPSQ--------------IKAL--------------------RLPDSIAASKV 775 (1058)
Q Consensus 731 ~~~~~~-~~~~~~~~~~i~~w~~~~~~~~~~--------------~~~~--------------------~~~~~~~~~~i 775 (1058)
....+. ..++...++.+++|++..+..... ...+ ..+-.+|...+
T Consensus 359 ~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v 438 (902)
T 2oaj_A 359 AGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTK 438 (902)
T ss_dssp HHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCC
T ss_pred CCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 77878506999917984899978999855655568985223589724899997499999888860469997545785778
Q ss_pred EEEEECCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEE
Q ss_conf 99999168745888312562899882567879887422345650037999873114668899999984599971699699
Q 001534 776 VRLIYTNSGLSLLALASNAVHKLWKWQRTERNPSGKATANVAPQLWQPPSGTLMTNDINESKPTEESAACIALSKNDSYV 855 (1058)
Q Consensus 776 ~~l~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~h~~~~i~~i~~s~d~~~l 855 (1058)
..++|+|+++.+++++.|++|++||+........ ..+... ... ..+.+| ...|.+++||||+++|
T Consensus 439 ~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~---------~~~~~~----l~~-~~~~~h-~~~V~svafspdg~~L 503 (902)
T 2oaj_A 439 RQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDN---------ASFEVN----LSR-TLNKAK-ELAVDKISFAAETLEL 503 (902)
T ss_dssp CCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTT---------BCEEEE----HHH-HTTCSS-SCCEEEEEEETTTTEE
T ss_pred CCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCC---------CEEEEE----CHH-HCCCCC-CCCEEEEEECCCCCEE
T ss_conf 7533366675899965898389997877645677---------367750----154-137788-8764699963899969
Q ss_pred EEEE-CCEEEEEECCCC---------------------------------------------EEEEEECCCCCCEEEEEE
Q ss_conf 9981-993999987786---------------------------------------------089995079888489998
Q 001534 856 MSAS-GGKVSLFNMMTF---------------------------------------------KVMTMFMSPPPAATFLAF 889 (1058)
Q Consensus 856 a~~s-dg~i~iwd~~~~---------------------------------------------~~~~~~~~~~~~i~~l~~ 889 (1058)
|+++ ||+|++|++.++ +++..+.+|.+.|++++|
T Consensus 504 Asgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svaf 583 (902)
T 2oaj_A 504 AVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINN 583 (902)
T ss_dssp EEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEE
T ss_pred EEEECCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEE
T ss_conf 99945857999992486555754557786651134551346796543224236898877760146999868886779996
Q ss_pred ECCCCCEEEEEECCCEEEEEECCCCEEEE-----EEE-CCCCCEEEEEEC-----CCC---CEEEEEECCCCEEEEEC--
Q ss_conf 07999889998489709999931553678-----881-777986899995-----899---98999938991999968--
Q 001534 890 HPQDNNIIAIGMEDSSVQIYNVRVDEVKT-----KLK-GHQNRITGLAFS-----PTL---NALVSSGADAQLCMWSI-- 953 (1058)
Q Consensus 890 s~~~~~~lasg~~dg~I~iwd~~~~~~~~-----~l~-~h~~~v~~l~~s-----pd~---~~l~s~s~D~~i~iwd~-- 953 (1058)
|| || +||+|+.|++|++||+.+...+. .+. +|.+.|++++|| ||| ++|++++.|++|++|++
T Consensus 584 Sp-dG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p 661 (902)
T 2oaj_A 584 SN-IG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILP 661 (902)
T ss_dssp CB-TS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEE
T ss_pred CC-CC-EEEEEECCCCEEEEECCCCEEEEEEEHHHHCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEEC
T ss_conf 48-76-89999589769999888983999702467264666613999999984178987633899995687399999955
Q ss_pred -CCCCCCCCEEEECCCCCCCCCCCEEEEE-EC----------------------CCCCEEEEEECCEEEEEEC-CCCEEE
Q ss_conf -9874001024325789899997803899-96----------------------8996999994991999918-997015
Q 001534 954 -DKWEKLKSRFIQAPAGRQSPLVGETKVQ-FH----------------------NDQTHLLVVHESQISVYDS-KLECSR 1008 (1058)
Q Consensus 954 -~~~~~~~~~~~~~~~~~~~~~~~v~~~~-fs----------------------~d~~~l~~~~d~~i~iwd~-~~~~~~ 1008 (1058)
.+|+......-.....+. ..|..+. |+ +++.+|+++ +..+++|++ ++++..
T Consensus 662 ~~~g~~~~~~~~~~~~~~~---~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~-~~~ir~~~~~~~k~~~ 737 (902)
T 2oaj_A 662 ASGGKFDVQLMDITNVTSK---GPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG-FDDIRLITLGKSKSTH 737 (902)
T ss_dssp CGGGCEEEEEEEEEECCSS---CCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC-SSEEEEECTTCCCEEE
T ss_pred CCCCCEEEEECCCEECCCC---CCEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCEEEEEEE-CCCEEEEECCCCCCEE
T ss_conf 8998689996672440788---96479985866879736688789725577887773999993-5405999675335123
Q ss_pred EEEECC--CCC---EE------ECCCCCEEEEEECCCEEEEECCCCC
Q ss_conf 884121--011---68------7129929999988981999729998
Q 001534 1009 SVSFLS--LCP---YV------FGVSSIFLLSTLTKLSVAVHDPLMK 1044 (1058)
Q Consensus 1009 ~~~~~~--~~~---~~------~s~~~~~l~~~~~d~~v~v~~~~~~ 1044 (1058)
...... +.. +. |++++..|++...|+.+++|++-.-
T Consensus 738 k~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~s~p~l 784 (902)
T 2oaj_A 738 KGFKYPLAATGLSYISTVEKNNDRKNLTVIITLEINGHLRVFTIPDF 784 (902)
T ss_dssp EECSSCEEEEEEEEEEEECSSSCEEEEEEEEEEETTSEEEEEETTTC
T ss_pred EECCCCEEEEEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEECCCH
T ss_conf 67256201447778870135554467369999927995999978564
Done!