Citrus Sinensis ID: 001537

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------106

MTDTTDDIAEEISFQSFDDDCKLLGNLLNDVLQREVGSESMERVERTRVLAQSACTMRLSGIEDTAELLEKQLASEISKMTLEEALILARAFSHYLNLMGIAETHHRVRKSRNVAHLSKSCDDIFSKLVQGGISPDELYDTVCKQEVEIVLTAHPTQINRRTLQYKHLRLSHLLDYNDRPDLGHEDREMQIEDMMREITSVWQTDELRRHKPTPVDEARAGLNIVEQSLWKAVPHYLRRVSNALKKHTGKPLPLTCAPIRFGSWMGGDRDGNPNVTAKVTRDVSLLSRWMAIDLYIREVDSLRFELSMNRCSDRMSRLAHDILERETSSGDRHESWNQALSRNQLKHHGQQAPSLPTQLPARADLPSCTECNDGGSHYPKLELPVTDYIPLSGQDSTGPESPCQNACNNTSKPAANGDGASSNSYQAGISCNSSFASKPLLAQRKIFAESQIGRSSFQKLLEPSLPQRSGIAPYRIVLGNVKEKLMKTRRRLELLLEDLPCDFDPWDYYETLDQLLEPLLLCYESLQSCGSGVLADGRLGDLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHGRGGSIGRGGGPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDKGNTEDLKAMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG

cccccccHHHccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHccccHHHHHHHHccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHcccccccEEEcccccHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHcHHHHHHHHHHcHHHHHHHHHHcccCEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccccccccccccHHHHHHHccccccccccEEEccccHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHcccHHHHcccccccccccccccccccccccccccHHccccccccHHHHHHHHHHHHHHccccHHHHHHHHHccccHHHHHHHHHHHHHHccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccc

************SFQSFDDDCKLLGNLLNDVLQREVGSESMERVERTRVLAQSACTM*******TAELLEKQLASEISKMTLEEALILARAFSHYLNLMGIAETHHRVRKSRNVAHLSKSCDDIFSKLVQGGISPDELYDTVCKQEVEIVLTAHPTQINRRTLQYKHLRLSHLLDYNDRPDLGHEDREMQIEDMMREITSVWQTDELRRHKPTPVDEARAGLNIVEQSLWKAVPHYLRRVSNALKKHTGKPLPLTCAPIRFGSWMGGDRDGNPNVTAKVTRDVSLLSRWMAIDLYIREVDSLRFELSMNRCSDRMSRLAHDILERETSSGDRHESWNQALSRNQLKHHGQQAPSLPTQLPARADLPSCTECNDGGSHYPKLELPVTDYIPLSGQDSTGPESPCQNACNNTSKPAANGDGASSNSYQAGISCNSSFASKPLLA***IF********SFQKLLEPSLPQRSGIAPYRIVLGNVKEKLMKTRRRLELLLEDLPCDFDPWDYYETLDQLLEPLLLCYESLQSCGSGVLADGRLGDLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHGRGGSIGRGGGPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLAT***********WRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGS********TGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDKGNTEDLKAMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNT*

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MTDTTDDIAEEISFQSFDDDCKLLGNLLNDVLQREVGSESMERVERTRVLAQSACTMRLSGIEDTAELLEKQLASEISKMTLEEALILARAFSHYLNLMGIAETHHRVRKSRNVAHLSKSCDDIFSKLVQGGISPDELYDTVCKQEVEIVLTAHPTQINRRTLQYKHLRLSHLLDYNDRPDLGHEDREMQIEDMMREITSVWQTDELRRHKPTPVDEARAGLNIVEQSLWKAVPHYLRRVSNALKKHTGKPLPLTCAPIRFGSWMGGDRDGNPNVTAKVTRDVSLLSRWMAIDLYIREVDSLRFELSMNRCSDRMSRLAHDILERETSSGDRHESWNQALSRNQLKHHGQQAPSLPTQLPARADLPSCTECNDGGSHYPKLELPVTDYIPLSGQDSTGPESPCQNACNNTSKPAANGDGASSNSYQAGISCNSSFASKPLLAQRKIFAESQIGRSSFQKLLEPSLPQRSGIAPYRIVxxxxxxxxxxxxxxxxxxxxxLPCDFDPWDYYETLDQLLEPLLLCYESLQSCGSGVLADGRLGDLIRRVVTFGMVLMKLDLRQESGRHAEALDAITRYLDMGTYSEWDEDKKLEFLTRELKGKRPLVPPTIEVPSDVKEVLDTFRVAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHGRGGSIGRGGGPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDKGNTEDLKAMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Phosphoenolpyruvate carboxylase 4	Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.	confident	Q8GVE8

Prediction of Enzyme Commission Number

EC Number	Description	Confidence Level
4.-.-.-	Lyases.	probable
4.1.-.-	Carbon-carbon lyases.	probable
4.1.1.-	Carboxy-lyases.	probable
4.1.1.31	Phosphoenolpyruvate carboxylase.	probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1JQO, chain A
Confidence level:very confident
Coverage over the Query: 454-660,672-1057
View the alignment between query and template
View the model in PyMOL