Query 001541
Match_columns 1057
No_of_seqs 699 out of 4425
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 03:24:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001541.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001541hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR02468 sucrsPsyn_pln sucros 100.0 2E-210 4E-215 1906.7 92.0 1042 1-1053 1-1050(1050)
2 TIGR02470 sucr_synth sucrose s 100.0 1.3E-56 2.9E-61 542.5 43.8 461 163-664 253-745 (784)
3 PLN00142 sucrose synthase 100.0 9.5E-56 2.1E-60 534.7 38.3 456 163-664 277-768 (815)
4 TIGR02472 sucr_P_syn_N sucrose 100.0 3.1E-53 6.7E-58 502.3 44.3 438 166-665 1-439 (439)
5 PRK14501 putative bifunctional 100.0 1.1E-49 2.3E-54 496.7 46.1 610 253-1053 70-724 (726)
6 PLN03063 alpha,alpha-trehalose 100.0 1.9E-45 4E-50 457.0 47.5 529 307-999 148-722 (797)
7 PLN02205 alpha,alpha-trehalose 100.0 2E-43 4.3E-48 438.1 42.9 581 268-998 152-801 (854)
8 PLN03064 alpha,alpha-trehalose 100.0 2.2E-43 4.9E-48 434.2 42.3 529 307-998 232-811 (934)
9 TIGR03449 mycothiol_MshA UDP-N 100.0 3.8E-40 8.1E-45 386.7 38.7 402 168-668 1-403 (405)
10 PLN02939 transferase, transfer 100.0 4.1E-39 8.8E-44 390.8 43.0 518 75-670 408-970 (977)
11 PRK00654 glgA glycogen synthas 100.0 1.1E-39 2.4E-44 389.2 36.1 444 166-669 1-465 (466)
12 cd03800 GT1_Sucrose_synthase T 100.0 9.1E-39 2E-43 372.4 39.0 395 167-661 1-397 (398)
13 PLN02316 synthase/transferase 100.0 8.3E-39 1.8E-43 395.5 39.8 425 162-668 584-1035(1036)
14 PRK10307 putative glycosyl tra 100.0 4.2E-38 9.2E-43 370.4 43.7 398 166-669 1-410 (412)
15 KOG0853 Glycosyltransferase [C 100.0 1E-41 2.2E-46 388.9 10.1 481 114-707 1-494 (495)
16 PLN02871 UDP-sulfoquinovose:DA 100.0 8E-38 1.7E-42 373.5 41.0 377 163-671 56-439 (465)
17 cd03796 GT1_PIG-A_like This fa 100.0 6.6E-38 1.4E-42 367.1 38.3 367 167-670 1-371 (398)
18 TIGR02095 glgA glycogen/starch 100.0 4.2E-38 9.1E-43 376.8 35.6 446 166-667 1-473 (473)
19 TIGR02149 glgA_Coryne glycogen 100.0 3.1E-37 6.6E-42 359.4 37.5 377 166-667 1-387 (388)
20 PRK14099 glycogen synthase; Pr 100.0 1.1E-36 2.4E-41 362.9 38.1 445 165-669 3-481 (485)
21 PRK14098 glycogen synthase; Pr 100.0 3.5E-36 7.6E-41 359.0 36.0 451 165-668 5-487 (489)
22 cd04962 GT1_like_5 This family 100.0 2.3E-35 5E-40 340.9 38.3 365 166-667 1-371 (371)
23 TIGR03088 stp2 sugar transfera 100.0 3.7E-35 7.9E-40 340.6 39.9 366 167-667 3-373 (374)
24 PRK15427 colanic acid biosynth 100.0 3.3E-35 7.2E-40 344.2 39.5 279 305-667 117-406 (406)
25 cd03791 GT1_Glycogen_synthase_ 100.0 5.4E-35 1.2E-39 350.5 35.6 444 167-666 1-476 (476)
26 cd03818 GT1_ExpC_like This fam 100.0 1.3E-34 2.8E-39 339.0 36.6 377 197-662 13-396 (396)
27 cd03805 GT1_ALG2_like This fam 100.0 2E-34 4.4E-39 336.1 37.4 387 166-660 1-392 (392)
28 PRK15179 Vi polysaccharide bio 100.0 8.1E-34 1.8E-38 345.7 40.3 392 163-665 278-692 (694)
29 PRK15484 lipopolysaccharide 1, 100.0 1.4E-33 3E-38 328.2 39.0 369 167-667 4-378 (380)
30 cd04955 GT1_like_6 This family 100.0 8.1E-33 1.8E-37 318.0 38.4 359 167-665 1-363 (363)
31 PRK15490 Vi polysaccharide bio 100.0 4.7E-33 1E-37 324.0 36.1 291 305-666 279-575 (578)
32 cd03813 GT1_like_3 This family 100.0 2.4E-32 5.3E-37 326.8 43.4 293 305-665 172-475 (475)
33 cd05844 GT1_like_7 Glycosyltra 100.0 5.6E-33 1.2E-37 320.5 34.4 278 305-662 81-366 (367)
34 cd03792 GT1_Trehalose_phosphor 100.0 1.7E-33 3.6E-38 326.8 28.6 284 305-667 84-372 (372)
35 cd03819 GT1_WavL_like This fam 100.0 3.6E-32 7.9E-37 311.8 36.6 342 189-655 8-354 (355)
36 cd03814 GT1_like_2 This family 100.0 6.2E-32 1.4E-36 308.9 36.4 362 167-665 1-364 (364)
37 cd03795 GT1_like_4 This family 100.0 9E-32 1.9E-36 308.3 37.3 352 167-657 1-357 (357)
38 cd03816 GT1_ALG1_like This fam 100.0 7.6E-32 1.6E-36 317.2 37.5 378 191-656 14-406 (415)
39 cd03802 GT1_AviGT4_like This f 100.0 7.7E-32 1.7E-36 306.5 35.4 331 166-665 1-335 (335)
40 KOG1111 N-acetylglucosaminyltr 100.0 3.3E-33 7.2E-38 299.3 20.8 366 166-671 1-371 (426)
41 cd03794 GT1_wbuB_like This fam 100.0 2.9E-31 6.3E-36 304.5 37.5 385 167-661 1-394 (394)
42 cd03806 GT1_ALG11_like This fa 100.0 2.7E-31 5.8E-36 312.6 37.7 374 190-657 13-417 (419)
43 PRK09922 UDP-D-galactose:(gluc 100.0 8.4E-32 1.8E-36 311.1 32.8 346 166-668 1-357 (359)
44 PLN02949 transferase, transfer 100.0 5.6E-31 1.2E-35 311.1 40.1 412 155-669 23-459 (463)
45 cd03821 GT1_Bme6_like This fam 100.0 2.3E-31 5E-36 304.0 35.3 285 305-661 86-374 (375)
46 PLN02846 digalactosyldiacylgly 100.0 3.7E-31 8E-36 308.1 37.2 383 163-667 2-392 (462)
47 cd03817 GT1_UGDG_like This fam 100.0 5.3E-31 1.1E-35 301.3 37.3 371 167-666 1-373 (374)
48 cd03799 GT1_amsK_like This is 100.0 5E-31 1.1E-35 301.9 36.8 268 305-659 78-354 (355)
49 cd03812 GT1_CapH_like This fam 100.0 2.7E-31 5.9E-36 304.9 34.1 335 189-648 10-346 (358)
50 cd03807 GT1_WbnK_like This fam 100.0 1.5E-30 3.3E-35 296.1 38.3 351 190-665 11-365 (365)
51 cd04951 GT1_WbdM_like This fam 100.0 1.7E-30 3.7E-35 298.1 38.9 346 189-665 10-359 (360)
52 PF05116 S6PP: Sucrose-6F-phos 100.0 1.8E-32 4E-37 298.4 21.3 242 774-1054 2-247 (247)
53 cd03801 GT1_YqgM_like This fam 100.0 1.9E-30 4.1E-35 294.2 38.4 372 167-665 1-374 (374)
54 cd03809 GT1_mtfB_like This fam 100.0 4.3E-31 9.2E-36 302.5 32.8 363 167-661 1-364 (365)
55 cd03822 GT1_ecORF704_like This 100.0 2.2E-30 4.7E-35 296.8 38.4 356 167-665 1-366 (366)
56 cd03820 GT1_amsD_like This fam 100.0 2E-30 4.3E-35 292.7 37.1 344 167-661 1-347 (348)
57 TIGR03087 stp1 sugar transfera 100.0 3.4E-31 7.4E-36 310.3 31.5 284 305-666 103-396 (397)
58 cd03825 GT1_wcfI_like This fam 100.0 5E-31 1.1E-35 303.1 32.0 345 166-667 1-365 (365)
59 PRK10125 putative glycosyl tra 100.0 1.3E-30 2.8E-35 304.8 33.5 367 166-667 1-405 (405)
60 cd03808 GT1_cap1E_like This fa 100.0 1E-29 2.2E-34 288.2 38.5 347 190-661 9-358 (359)
61 cd03823 GT1_ExpE7_like This fa 100.0 1.1E-29 2.3E-34 289.6 36.1 355 167-665 1-358 (359)
62 cd03798 GT1_wlbH_like This fam 100.0 1.5E-29 3.3E-34 288.0 36.5 283 305-667 92-377 (377)
63 PF00862 Sucrose_synth: Sucros 100.0 3.6E-31 7.9E-36 297.2 13.6 248 163-441 270-531 (550)
64 TIGR01485 SPP_plant-cyano sucr 100.0 9.3E-30 2E-34 278.8 23.5 242 774-1055 1-249 (249)
65 PLN02382 probable sucrose-phos 100.0 7.2E-30 1.6E-34 296.5 23.4 246 772-1055 7-262 (413)
66 cd03811 GT1_WabH_like This fam 100.0 3.6E-28 7.9E-33 274.4 34.7 267 305-652 80-352 (353)
67 PLN02275 transferase, transfer 100.0 4.6E-28 1E-32 281.1 36.3 335 189-631 14-371 (371)
68 TIGR02918 accessory Sec system 100.0 2.2E-28 4.7E-33 291.7 32.8 281 305-667 210-500 (500)
69 cd03804 GT1_wbaZ_like This fam 100.0 2.8E-28 6E-33 280.5 32.4 265 305-660 82-350 (351)
70 cd04946 GT1_AmsK_like This fam 100.0 1.8E-28 3.8E-33 288.0 29.7 276 305-661 126-406 (407)
71 PRK10976 putative hydrolase; P 100.0 1.8E-29 3.9E-34 279.4 19.8 244 774-1054 2-265 (266)
72 PLN02501 digalactosyldiacylgly 100.0 6.5E-28 1.4E-32 282.7 33.6 377 165-665 322-708 (794)
73 COG0561 Cof Predicted hydrolas 100.0 4E-29 8.7E-34 276.3 21.8 233 773-1055 2-263 (264)
74 PRK15126 thiamin pyrimidine py 100.0 2.2E-29 4.7E-34 279.7 18.9 242 774-1053 2-262 (272)
75 TIGR02400 trehalose_OtsA alpha 100.0 1.6E-28 3.5E-33 289.4 26.4 366 253-665 64-455 (456)
76 PRK10513 sugar phosphate phosp 100.0 6.7E-29 1.5E-33 275.4 21.8 243 774-1053 3-268 (270)
77 TIGR02471 sucr_syn_bact_C sucr 100.0 1.4E-28 3.1E-33 267.3 22.3 233 776-1054 1-236 (236)
78 cd03788 GT1_TPS Trehalose-6-Ph 100.0 1E-27 2.2E-32 284.8 20.5 363 252-664 67-459 (460)
79 cd03793 GT1_Glycogen_synthase_ 100.0 1.3E-26 2.9E-31 270.2 29.0 325 305-669 147-589 (590)
80 COG0297 GlgA Glycogen synthase 100.0 2.8E-26 6E-31 267.3 31.6 449 166-671 1-482 (487)
81 PRK03669 mannosyl-3-phosphogly 100.0 1.6E-27 3.5E-32 264.4 19.6 244 772-1053 5-268 (271)
82 PHA01630 putative group 1 glyc 99.9 1.9E-26 4.2E-31 261.9 26.7 254 312-666 52-330 (331)
83 PLN02887 hydrolase family prot 99.9 4.1E-27 8.9E-32 280.9 21.9 236 772-1053 306-579 (580)
84 PRK01158 phosphoglycolate phos 99.9 7.1E-27 1.5E-31 252.9 21.4 225 774-1054 3-230 (230)
85 cd04949 GT1_gtfA_like This fam 99.9 3.3E-26 7.2E-31 265.3 28.4 273 305-660 98-372 (372)
86 TIGR01482 SPP-subfamily Sucros 99.9 3.4E-27 7.3E-32 254.5 17.6 218 777-1053 1-225 (225)
87 PRK00726 murG undecaprenyldiph 99.9 5.1E-25 1.1E-29 254.3 32.4 344 166-665 2-356 (357)
88 PF08282 Hydrolase_3: haloacid 99.9 2.5E-26 5.4E-31 250.6 19.1 225 777-1049 1-254 (254)
89 TIGR02398 gluc_glyc_Psyn gluco 99.9 9.1E-26 2E-30 264.3 24.6 367 253-666 69-482 (487)
90 PRK10530 pyridoxal phosphate ( 99.9 3.7E-26 8E-31 253.7 20.0 244 774-1053 3-271 (272)
91 PHA01633 putative glycosyl tra 99.9 2.8E-24 6E-29 241.8 32.4 221 375-662 90-335 (335)
92 TIGR01486 HAD-SF-IIB-MPGP mann 99.9 2E-25 4.3E-30 245.6 20.6 234 776-1052 1-255 (256)
93 cd03785 GT1_MurG MurG is an N- 99.9 3.2E-24 7E-29 246.6 31.5 331 189-658 8-349 (350)
94 TIGR01133 murG undecaprenyldip 99.9 5.8E-24 1.3E-28 244.2 29.6 327 190-658 10-346 (348)
95 TIGR00099 Cof-subfamily Cof su 99.9 5.5E-25 1.2E-29 242.2 18.6 227 776-1049 1-256 (256)
96 PRK10117 trehalose-6-phosphate 99.9 1.3E-23 2.9E-28 243.3 26.3 369 253-670 60-457 (474)
97 TIGR01487 SPP-like sucrose-pho 99.9 3.7E-24 7.9E-29 229.4 18.2 211 775-1049 2-215 (215)
98 PRK00192 mannosyl-3-phosphogly 99.9 2.8E-23 6E-28 230.8 20.8 248 773-1053 3-271 (273)
99 KOG1050 Trehalose-6-phosphate 99.9 3.6E-21 7.9E-26 232.7 36.3 528 307-998 141-693 (732)
100 PRK05749 3-deoxy-D-manno-octul 99.9 2.2E-21 4.7E-26 229.5 30.8 283 305-668 123-421 (425)
101 PRK13609 diacylglycerol glucos 99.9 7.3E-21 1.6E-25 221.7 29.7 263 305-667 103-372 (380)
102 COG0380 OtsA Trehalose-6-phosp 99.9 5.1E-21 1.1E-25 220.5 26.2 353 268-666 104-479 (486)
103 PRK10187 trehalose-6-phosphate 99.9 1.5E-21 3.3E-26 215.2 19.4 195 773-1007 13-223 (266)
104 PF00982 Glyco_transf_20: Glyc 99.9 1.1E-21 2.4E-26 230.6 18.5 369 252-666 73-474 (474)
105 cd04950 GT1_like_1 Glycosyltra 99.9 9.2E-20 2E-24 211.9 31.4 265 305-666 101-371 (373)
106 PRK14502 bifunctional mannosyl 99.9 1.4E-20 3.1E-25 223.0 23.4 256 761-1052 403-689 (694)
107 TIGR02463 MPGP_rel mannosyl-3- 99.9 9.8E-21 2.1E-25 203.7 18.0 205 776-1004 1-221 (221)
108 PTZ00174 phosphomannomutase; P 99.9 1.2E-20 2.6E-25 206.4 18.7 207 772-1007 3-234 (247)
109 PLN02605 monogalactosyldiacylg 99.9 3E-19 6.5E-24 208.2 31.0 265 305-665 99-380 (382)
110 PRK13608 diacylglycerol glucos 99.8 4.3E-19 9.4E-24 207.4 30.5 268 305-671 103-376 (391)
111 PF00534 Glycos_transf_1: Glyc 99.8 1.4E-20 3.1E-25 193.6 14.0 162 470-647 10-172 (172)
112 TIGR01484 HAD-SF-IIB HAD-super 99.8 7.8E-20 1.7E-24 194.2 17.5 193 776-1003 1-204 (204)
113 KOG1387 Glycosyltransferase [C 99.8 2E-17 4.4E-22 176.9 33.0 390 189-670 55-462 (465)
114 TIGR02461 osmo_MPG_phos mannos 99.8 1E-18 2.2E-23 188.0 15.7 209 776-1004 1-225 (225)
115 cd01635 Glycosyltransferase_GT 99.8 1.7E-17 3.8E-22 176.5 22.3 119 480-615 109-229 (229)
116 PLN02580 trehalose-phosphatase 99.8 1.3E-17 2.9E-22 188.8 19.4 205 771-1007 116-354 (384)
117 PLN02423 phosphomannomutase 99.8 1.7E-17 3.6E-22 181.0 18.7 205 771-1005 4-232 (245)
118 COG0438 RfaG Glycosyltransfera 99.8 4.1E-16 9E-21 174.6 30.1 288 307-668 84-378 (381)
119 PRK12702 mannosyl-3-phosphogly 99.7 7.7E-17 1.7E-21 174.3 21.5 249 774-1052 1-293 (302)
120 TIGR00685 T6PP trehalose-phosp 99.7 2.2E-17 4.8E-22 180.3 17.4 193 773-1004 2-217 (244)
121 PRK09814 beta-1,6-galactofuran 99.7 8.7E-16 1.9E-20 175.8 31.0 245 305-659 62-324 (333)
122 KOG2941 Beta-1,4-mannosyltrans 99.7 4.7E-15 1E-19 159.2 34.0 382 197-657 29-432 (444)
123 TIGR00236 wecB UDP-N-acetylglu 99.7 1.1E-16 2.3E-21 185.7 20.9 273 305-662 85-363 (365)
124 TIGR02094 more_P_ylases alpha- 99.7 9.9E-16 2.1E-20 185.2 24.5 338 305-665 160-599 (601)
125 cd03786 GT1_UDP-GlcNAc_2-Epime 99.7 1.1E-15 2.4E-20 176.7 24.0 250 305-640 87-344 (363)
126 PLN03017 trehalose-phosphatase 99.7 3E-16 6.4E-21 176.3 17.3 201 772-1006 109-335 (366)
127 PRK00025 lpxB lipid-A-disaccha 99.7 1.9E-15 4E-20 176.2 24.4 249 305-649 84-357 (380)
128 COG1877 OtsB Trehalose-6-phosp 99.6 3.1E-15 6.8E-20 161.8 15.6 194 771-999 15-219 (266)
129 PLN02151 trehalose-phosphatase 99.6 3.2E-15 7E-20 167.5 16.2 202 771-1005 95-320 (354)
130 PF02358 Trehalose_PPase: Treh 99.6 7.6E-15 1.7E-19 159.5 10.7 191 778-1007 1-219 (235)
131 TIGR03713 acc_sec_asp1 accesso 99.6 9.6E-14 2.1E-18 166.2 19.9 167 476-663 320-518 (519)
132 cd04299 GT1_Glycogen_Phosphory 99.5 1.6E-12 3.5E-17 159.9 29.8 331 305-665 247-688 (778)
133 PF05693 Glycogen_syn: Glycoge 99.5 1.7E-12 3.6E-17 151.6 23.7 328 305-670 142-585 (633)
134 PF13692 Glyco_trans_1_4: Glyc 99.4 1.8E-13 3.8E-18 135.0 6.8 131 475-633 2-135 (135)
135 TIGR00215 lpxB lipid-A-disacch 99.4 4.1E-11 8.9E-16 139.8 24.8 251 305-649 88-367 (385)
136 PF13579 Glyco_trans_4_4: Glyc 99.3 4.8E-12 1E-16 127.2 9.8 160 191-431 1-160 (160)
137 PRK12446 undecaprenyldiphospho 99.3 1.9E-09 4.1E-14 124.3 31.5 308 189-637 10-329 (352)
138 COG0707 MurG UDP-N-acetylgluco 99.3 3.8E-09 8.2E-14 120.8 33.2 334 189-662 9-353 (357)
139 PF13439 Glyco_transf_4: Glyco 99.3 2.1E-11 4.6E-16 124.7 13.0 169 188-438 9-177 (177)
140 PF13524 Glyco_trans_1_2: Glyc 99.3 2.7E-11 5.9E-16 111.5 10.2 91 570-662 1-92 (92)
141 COG3769 Predicted hydrolase (H 99.2 1.9E-10 4E-15 117.0 16.0 252 773-1053 6-271 (274)
142 TIGR02919 accessory Sec system 99.1 9E-09 2E-13 120.9 23.5 192 376-652 238-430 (438)
143 TIGR03492 conserved hypothetic 99.0 8.7E-08 1.9E-12 112.2 28.7 165 473-662 203-394 (396)
144 cd03784 GT1_Gtf_like This fami 99.0 5.8E-08 1.2E-12 114.2 26.5 133 467-634 232-373 (401)
145 PF09314 DUF1972: Domain of un 99.0 5E-08 1.1E-12 100.6 21.1 180 167-433 3-185 (185)
146 PRK11133 serB phosphoserine ph 98.8 1.6E-08 3.6E-13 114.2 12.5 71 957-1050 246-316 (322)
147 PF08323 Glyco_transf_5: Starc 98.8 4E-09 8.7E-14 115.3 7.1 213 167-396 1-234 (245)
148 TIGR01670 YrbI-phosphatas 3-de 98.8 1.4E-08 3.1E-13 102.9 10.1 72 959-1052 76-148 (154)
149 TIGR02726 phenyl_P_delta pheny 98.8 1.4E-08 3E-13 104.1 8.9 70 959-1050 82-152 (169)
150 TIGR01426 MGT glycosyltransfer 98.8 4.9E-06 1.1E-10 97.7 31.5 111 543-664 274-390 (392)
151 COG1519 KdtA 3-deoxy-D-manno-o 98.8 1.1E-05 2.3E-10 91.8 31.3 264 305-649 122-402 (419)
152 TIGR03568 NeuC_NnaA UDP-N-acet 98.7 7.1E-06 1.5E-10 95.2 30.0 264 305-663 92-364 (365)
153 PF13528 Glyco_trans_1_3: Glyc 98.6 2.3E-06 4.9E-11 97.3 21.1 118 473-630 191-317 (318)
154 TIGR00661 MJ1255 conserved hyp 98.6 6.1E-06 1.3E-10 94.2 24.1 111 489-634 199-315 (321)
155 PRK09484 3-deoxy-D-manno-octul 98.6 8.8E-08 1.9E-12 100.0 7.7 45 960-1007 97-141 (183)
156 PF13477 Glyco_trans_4_2: Glyc 98.5 9.2E-07 2E-11 87.6 12.9 128 194-385 10-139 (139)
157 TIGR03590 PseG pseudaminic aci 98.5 1.8E-05 3.9E-10 88.4 22.5 98 475-599 171-268 (279)
158 smart00775 LNS2 LNS2 domain. T 98.4 7.5E-07 1.6E-11 90.5 7.5 67 776-849 1-89 (157)
159 COG0560 SerB Phosphoserine pho 98.3 2.6E-06 5.7E-11 90.8 10.6 52 950-1004 135-186 (212)
160 COG4641 Uncharacterized protei 98.3 6.9E-05 1.5E-09 84.0 21.5 192 424-670 162-365 (373)
161 PHA03392 egt ecdysteroid UDP-g 98.3 0.00054 1.2E-08 82.9 30.7 165 465-665 286-465 (507)
162 COG0381 WecB UDP-N-acetylgluco 98.2 0.00038 8.2E-09 78.8 24.7 272 305-665 91-369 (383)
163 cd01427 HAD_like Haloacid deha 98.2 3E-06 6.4E-11 82.6 7.2 52 776-831 1-63 (139)
164 KOG3742 Glycogen synthase [Car 98.2 9.7E-06 2.1E-10 90.6 11.3 103 556-663 493-609 (692)
165 TIGR01457 HAD-SF-IIA-hyp2 HAD- 98.2 5.9E-06 1.3E-10 90.7 9.7 70 775-849 2-76 (249)
166 KOG3189 Phosphomannomutase [Li 98.1 4.1E-05 8.8E-10 77.4 13.3 195 772-996 9-228 (252)
167 PLN02448 UDP-glycosyltransfera 98.1 0.002 4.3E-08 77.3 30.1 140 474-647 274-430 (459)
168 PF02350 Epimerase_2: UDP-N-ac 98.1 6.6E-05 1.4E-09 86.4 15.5 272 305-664 66-345 (346)
169 COG1778 Low specificity phosph 98.0 6.7E-06 1.5E-10 80.5 5.8 55 959-1018 83-137 (170)
170 PF04007 DUF354: Protein of un 98.0 0.0015 3.3E-08 74.3 25.7 66 556-632 241-309 (335)
171 TIGR01689 EcbF-BcbF capsule bi 97.9 2.7E-05 5.9E-10 75.5 7.5 60 775-841 2-85 (126)
172 PF13844 Glyco_transf_41: Glyc 97.9 8E-05 1.7E-09 87.4 12.7 185 463-667 273-467 (468)
173 PLN02208 glycosyltransferase f 97.9 0.04 8.8E-07 65.6 35.4 94 545-647 312-416 (442)
174 TIGR01684 viral_ppase viral ph 97.9 3.3E-05 7.1E-10 84.6 8.6 73 772-850 124-202 (301)
175 PLN03007 UDP-glucosyltransfera 97.8 0.094 2E-06 63.4 37.8 146 466-634 275-441 (482)
176 COG1819 Glycosyl transferases, 97.8 0.0021 4.6E-08 75.6 22.9 114 541-665 281-400 (406)
177 PRK10444 UMP phosphatase; Prov 97.8 0.00026 5.6E-09 77.6 14.2 63 775-842 2-69 (248)
178 PLN02670 transferase, transfer 97.8 0.087 1.9E-06 63.1 35.4 185 463-668 265-467 (472)
179 PLN02562 UDP-glycosyltransfera 97.7 0.038 8.2E-07 66.0 31.4 138 475-639 274-419 (448)
180 TIGR01491 HAD-SF-IB-PSPlk HAD- 97.7 0.00038 8.2E-09 73.4 12.4 45 959-1006 147-191 (201)
181 COG3914 Spy Predicted O-linked 97.7 0.002 4.3E-08 75.7 18.7 178 470-668 425-615 (620)
182 PHA03398 viral phosphatase sup 97.6 0.00015 3.3E-09 79.5 8.5 74 771-850 125-204 (303)
183 PRK10017 colanic acid biosynth 97.6 0.18 4E-06 59.7 34.0 91 549-648 313-407 (426)
184 PLN02410 UDP-glucoronosyl/UDP- 97.5 0.21 4.6E-06 59.7 34.2 93 544-646 324-422 (451)
185 PLN02863 UDP-glucoronosyl/UDP- 97.5 0.4 8.7E-06 57.8 37.4 147 465-632 272-432 (477)
186 PF11997 DUF3492: Domain of un 97.5 0.0045 9.8E-08 68.5 18.4 86 306-393 172-261 (268)
187 TIGR00338 serB phosphoserine p 97.5 0.00063 1.4E-08 73.0 11.3 43 959-1004 152-194 (219)
188 PLN02992 coniferyl-alcohol glu 97.5 0.38 8.3E-06 57.8 34.9 81 545-634 339-428 (481)
189 COG3980 spsG Spore coat polysa 97.4 0.014 2.9E-07 63.3 18.5 139 473-642 157-302 (318)
190 PLN00164 glucosyltransferase; 97.3 0.6 1.3E-05 56.4 35.1 93 546-647 341-446 (480)
191 PF03332 PMM: Eukaryotic phosp 97.3 0.00045 9.9E-09 72.5 7.1 181 794-1005 2-207 (220)
192 TIGR01488 HAD-SF-IB Haloacid D 97.3 0.00083 1.8E-08 69.3 8.9 42 953-997 136-177 (177)
193 PF02684 LpxB: Lipid-A-disacch 97.3 0.038 8.2E-07 64.0 22.9 145 471-639 180-346 (373)
194 COG4671 Predicted glycosyl tra 97.3 0.15 3.2E-06 57.2 25.9 336 164-632 8-364 (400)
195 PLN02173 UDP-glucosyl transfer 97.3 0.76 1.6E-05 54.9 35.7 94 544-647 317-421 (449)
196 PLN00414 glycosyltransferase f 97.2 0.73 1.6E-05 55.1 33.9 93 546-647 314-417 (446)
197 PLN02554 UDP-glycosyltransfera 97.2 0.92 2E-05 54.9 36.3 151 465-635 263-443 (481)
198 PLN02764 glycosyltransferase f 97.2 0.86 1.9E-05 54.4 34.8 114 546-668 319-447 (453)
199 TIGR02137 HSK-PSP phosphoserin 97.2 0.0032 7E-08 66.9 12.2 41 957-1004 130-170 (203)
200 COG0763 LpxB Lipid A disacchar 97.1 0.047 1E-06 62.1 21.0 241 305-643 84-354 (381)
201 PLN02210 UDP-glucosyl transfer 97.1 0.67 1.5E-05 55.6 31.9 136 474-635 269-417 (456)
202 PRK02797 4-alpha-L-fucosyltran 96.9 0.41 8.9E-06 53.3 25.5 169 475-669 145-319 (322)
203 TIGR01458 HAD-SF-IIA-hyp3 HAD- 96.9 0.00065 1.4E-08 75.0 3.9 63 775-842 2-73 (257)
204 TIGR01106 ATPase-IIC_X-K sodiu 96.9 0.0087 1.9E-07 78.4 14.8 41 787-831 567-607 (997)
205 PF12000 Glyco_trans_4_3: Gkyc 96.9 0.0087 1.9E-07 61.3 11.6 148 252-437 19-170 (171)
206 PF08550 DUF1752: Fungal prote 96.9 0.0004 8.7E-09 48.9 1.2 24 63-86 6-29 (29)
207 PLN02167 UDP-glycosyltransfera 96.9 1.7 3.8E-05 52.4 35.9 149 465-634 269-435 (475)
208 PLN02954 phosphoserine phospha 96.9 0.0048 1E-07 66.4 9.8 43 956-1003 152-194 (224)
209 TIGR01662 HAD-SF-IIIA HAD-supe 96.8 0.0018 4E-08 63.6 5.9 54 775-832 1-73 (132)
210 PLN02555 limonoid glucosyltran 96.8 1.6 3.5E-05 52.6 31.6 94 544-647 337-442 (480)
211 TIGR01681 HAD-SF-IIIC HAD-supe 96.8 0.002 4.4E-08 63.1 5.5 52 775-830 1-68 (128)
212 PLN02645 phosphoglycolate phos 96.8 0.0021 4.6E-08 73.0 6.5 65 773-842 27-96 (311)
213 PRK01021 lpxB lipid-A-disaccha 96.7 0.17 3.7E-06 61.5 22.4 243 305-646 309-584 (608)
214 PLN03004 UDP-glycosyltransfera 96.7 2.1 4.5E-05 51.3 31.9 152 466-635 260-426 (451)
215 PRK10671 copA copper exporting 96.7 0.0099 2.2E-07 76.7 12.4 54 774-831 630-689 (834)
216 COG3660 Predicted nucleoside-d 96.6 0.3 6.6E-06 52.5 20.6 198 305-601 69-275 (329)
217 TIGR01664 DNA-3'-Pase DNA 3'-p 96.6 0.0037 8.1E-08 64.2 6.4 65 772-843 11-102 (166)
218 COG0647 NagD Predicted sugar p 96.6 0.034 7.4E-07 61.3 13.7 67 772-842 6-77 (269)
219 PF07429 Glyco_transf_56: 4-al 96.5 0.75 1.6E-05 52.0 23.9 141 475-632 184-332 (360)
220 TIGR01497 kdpB K+-transporting 96.5 0.024 5.1E-07 70.4 13.0 55 773-831 425-485 (675)
221 PLN02534 UDP-glycosyltransfera 96.4 3.4 7.3E-05 50.0 35.2 92 544-646 344-458 (491)
222 TIGR01452 PGP_euk phosphoglyco 96.4 0.0046 9.9E-08 69.2 5.8 65 773-842 1-70 (279)
223 COG0058 GlgP Glucan phosphoryl 96.3 0.04 8.8E-07 67.8 13.9 138 472-616 484-629 (750)
224 COG1817 Uncharacterized protei 96.2 1.5 3.2E-05 48.7 23.4 136 465-635 172-316 (346)
225 PF06258 Mito_fiss_Elm1: Mitoc 96.2 0.16 3.5E-06 57.5 17.0 111 472-601 144-259 (311)
226 PRK13223 phosphoglycolate phos 96.1 0.0067 1.5E-07 67.6 5.5 51 954-1007 153-204 (272)
227 PF13344 Hydrolase_6: Haloacid 96.1 0.0089 1.9E-07 56.0 5.4 52 777-832 1-57 (101)
228 PLN03015 UDP-glucosyl transfer 95.9 5.7 0.00012 47.8 33.7 92 546-646 337-440 (470)
229 PF08288 PIGA: PIGA (GPI ancho 95.9 0.02 4.3E-07 51.2 6.2 36 305-340 49-86 (90)
230 TIGR01517 ATPase-IIB_Ca plasma 95.9 0.092 2E-06 68.7 15.1 42 787-832 578-619 (941)
231 TIGR01116 ATPase-IIA1_Ca sarco 95.9 0.036 7.8E-07 72.2 11.3 41 787-831 536-576 (917)
232 TIGR01525 ATPase-IB_hvy heavy 95.9 0.036 7.8E-07 68.3 10.7 55 773-831 363-424 (556)
233 PRK11033 zntA zinc/cadmium/mer 95.9 0.032 6.8E-07 70.9 10.3 55 773-831 547-607 (741)
234 TIGR01522 ATPase-IIA2_Ca golgi 95.8 0.12 2.7E-06 67.1 15.7 56 773-832 502-568 (884)
235 PRK13222 phosphoglycolate phos 95.8 0.072 1.6E-06 57.1 11.5 46 959-1007 150-196 (226)
236 TIGR01490 HAD-SF-IB-hyp1 HAD-s 95.8 0.047 1E-06 57.6 9.7 46 956-1004 152-197 (202)
237 PLN02152 indole-3-acetate beta 95.8 6.5 0.00014 47.1 33.0 154 465-634 250-418 (455)
238 TIGR01511 ATPase-IB1_Cu copper 95.7 0.067 1.5E-06 65.9 12.2 55 773-831 384-444 (562)
239 TIGR01524 ATPase-IIIB_Mg magne 95.7 0.11 2.3E-06 67.4 14.5 41 787-831 514-554 (867)
240 TIGR01647 ATPase-IIIA_H plasma 95.7 0.15 3.1E-06 65.2 15.3 56 773-832 416-482 (755)
241 PRK01122 potassium-transportin 95.6 0.087 1.9E-06 65.6 12.6 54 774-831 425-484 (679)
242 PF08235 LNS2: LNS2 (Lipin/Ned 95.6 0.028 6E-07 56.6 6.8 50 776-829 1-67 (157)
243 TIGR01657 P-ATPase-V P-type AT 95.6 0.052 1.1E-06 71.8 11.3 41 787-831 655-695 (1054)
244 PRK13225 phosphoglycolate phos 95.6 0.14 3E-06 57.1 12.8 42 959-1003 196-237 (273)
245 PRK10517 magnesium-transportin 95.6 0.092 2E-06 68.1 12.9 41 787-831 549-589 (902)
246 PRK14986 glycogen phosphorylas 95.5 0.06 1.3E-06 67.2 10.6 149 471-626 539-703 (815)
247 PF12038 DUF3524: Domain of un 95.5 0.05 1.1E-06 54.9 8.1 78 305-394 58-136 (168)
248 TIGR01523 ATPase-IID_K-Na pota 95.5 0.057 1.2E-06 71.0 11.0 41 787-831 645-685 (1053)
249 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.5 0.023 5.1E-07 62.1 6.3 67 772-842 6-76 (242)
250 PRK11590 hypothetical protein; 95.5 0.064 1.4E-06 57.4 9.5 44 955-1004 159-202 (211)
251 PRK13226 phosphoglycolate phos 95.3 0.044 9.6E-07 59.3 7.8 40 960-1002 153-192 (229)
252 PRK15122 magnesium-transportin 95.3 0.16 3.5E-06 66.0 13.7 41 787-831 549-589 (903)
253 PRK14985 maltodextrin phosphor 95.3 0.15 3.2E-06 63.6 12.6 140 471-616 525-680 (798)
254 TIGR01460 HAD-SF-IIA Haloacid 95.2 0.024 5.3E-07 61.7 5.1 64 777-845 1-70 (236)
255 PF00343 Phosphorylase: Carboh 95.1 0.37 8E-06 59.6 15.4 140 471-616 440-595 (713)
256 cd04300 GT1_Glycogen_Phosphory 95.0 0.14 3E-06 64.1 11.4 148 471-625 526-689 (797)
257 COG2217 ZntA Cation transport 94.9 0.11 2.3E-06 65.0 10.2 52 776-831 519-576 (713)
258 TIGR01489 DKMTPPase-SF 2,3-dik 94.9 0.2 4.4E-06 51.9 10.9 41 954-1000 144-184 (188)
259 PRK14010 potassium-transportin 94.8 0.18 3.9E-06 62.8 11.6 53 775-831 422-480 (673)
260 TIGR01672 AphA HAD superfamily 94.8 0.076 1.7E-06 57.7 7.4 36 793-832 119-158 (237)
261 COG0474 MgtA Cation transport 94.7 0.15 3.4E-06 66.2 11.4 42 787-832 546-587 (917)
262 TIGR01675 plant-AP plant acid 94.7 0.094 2E-06 56.4 7.7 56 773-832 76-163 (229)
263 TIGR01685 MDP-1 magnesium-depe 94.6 0.069 1.5E-06 55.2 6.4 53 775-831 3-85 (174)
264 PRK14089 ipid-A-disaccharide s 94.6 1.2 2.6E-05 51.4 17.1 79 487-597 182-260 (347)
265 TIGR01512 ATPase-IB2_Cd heavy 94.6 0.14 3E-06 62.9 10.0 53 775-831 343-402 (536)
266 TIGR01261 hisB_Nterm histidino 94.5 0.075 1.6E-06 54.3 6.3 60 774-840 1-89 (161)
267 TIGR01663 PNK-3'Pase polynucle 94.4 0.074 1.6E-06 64.2 7.1 67 770-843 164-257 (526)
268 PRK10826 2-deoxyglucose-6-phos 94.4 0.33 7.1E-06 52.1 11.5 43 959-1004 149-191 (222)
269 TIGR01656 Histidinol-ppas hist 94.4 0.067 1.4E-06 53.7 5.6 53 775-831 1-81 (147)
270 PF04464 Glyphos_transf: CDP-G 94.2 0.54 1.2E-05 54.7 13.6 110 541-664 249-367 (369)
271 PHA02530 pseT polynucleotide k 94.2 0.059 1.3E-06 60.8 5.3 57 772-832 156-227 (300)
272 KOG0203 Na+/K+ ATPase, alpha s 94.0 0.4 8.6E-06 59.1 11.8 164 791-1037 593-756 (1019)
273 PRK13288 pyrophosphatase PpaX; 94.0 0.31 6.8E-06 52.0 10.2 45 955-1002 135-179 (214)
274 PRK08942 D,D-heptose 1,7-bisph 93.9 0.12 2.7E-06 53.7 6.6 41 774-818 3-55 (181)
275 TIGR00213 GmhB_yaeD D,D-heptos 93.9 0.13 2.8E-06 53.3 6.6 40 775-818 2-52 (176)
276 TIGR02093 P_ylase glycogen/sta 93.9 0.17 3.7E-06 63.1 8.6 149 471-626 523-687 (794)
277 COG4370 Uncharacterized protei 93.8 1.3 2.7E-05 48.8 13.9 143 484-648 237-394 (412)
278 PF04101 Glyco_tran_28_C: Glyc 93.7 0.072 1.6E-06 54.5 4.5 90 544-643 55-154 (167)
279 TIGR01533 lipo_e_P4 5'-nucleot 93.7 0.2 4.2E-06 55.4 8.0 67 773-843 74-172 (266)
280 KOG1615 Phosphoserine phosphat 93.6 0.28 6.2E-06 50.4 8.1 47 956-1007 156-202 (227)
281 TIGR01668 YqeG_hyp_ppase HAD s 93.3 0.17 3.7E-06 52.1 6.5 55 773-831 24-83 (170)
282 PF00201 UDPGT: UDP-glucoronos 93.3 0.37 8.1E-06 58.5 10.5 139 464-637 264-413 (500)
283 PLN02207 UDP-glycosyltransfera 93.3 24 0.00051 42.6 34.2 142 465-632 264-425 (468)
284 PRK08238 hypothetical protein; 93.3 0.23 5E-06 59.7 8.2 48 791-846 75-122 (479)
285 PLN02575 haloacid dehalogenase 92.5 0.8 1.7E-05 53.2 11.0 41 960-1003 274-314 (381)
286 TIGR01686 FkbH FkbH-like domai 92.4 0.27 5.9E-06 56.1 7.1 55 773-831 2-74 (320)
287 smart00577 CPDc catalytic doma 92.4 0.31 6.8E-06 48.9 6.7 54 773-831 1-83 (148)
288 PRK06769 hypothetical protein; 91.9 0.33 7.2E-06 50.2 6.3 55 773-831 3-75 (173)
289 COG2179 Predicted hydrolase of 91.7 0.54 1.2E-05 47.5 7.2 58 771-832 25-86 (175)
290 PRK05446 imidazole glycerol-ph 91.7 0.31 6.8E-06 56.0 6.4 55 774-832 2-85 (354)
291 PRK09552 mtnX 2-hydroxy-3-keto 91.7 0.35 7.6E-06 51.9 6.5 37 959-1002 148-184 (219)
292 PF10933 DUF2827: Protein of u 91.4 31 0.00067 39.5 23.0 120 532-664 239-363 (364)
293 TIGR01990 bPGM beta-phosphoglu 91.0 1.4 3E-05 45.6 9.9 41 959-1002 142-182 (185)
294 PRK11009 aphA acid phosphatase 90.5 0.91 2E-05 49.4 8.2 36 793-832 119-158 (237)
295 PLN03243 haloacid dehalogenase 90.2 3 6.5E-05 46.1 12.2 40 960-1002 167-206 (260)
296 PF05152 DUF705: Protein of un 90.0 1 2.3E-05 49.3 8.0 67 772-843 120-192 (297)
297 TIGR02253 CTE7 HAD superfamily 89.6 1.8 3.9E-05 46.1 9.7 42 960-1004 152-195 (221)
298 PF08645 PNK3P: Polynucleotide 89.1 0.28 6E-06 50.1 2.7 54 775-832 1-83 (159)
299 PLN03190 aminophospholipid tra 88.8 2.8 6.1E-05 55.9 12.4 41 787-831 725-765 (1178)
300 PRK11587 putative phosphatase; 88.7 4.5 9.9E-05 43.2 11.9 45 960-1007 140-185 (218)
301 KOG0202 Ca2+ transporting ATPa 88.5 2 4.4E-05 53.3 9.8 55 772-831 569-623 (972)
302 TIGR01652 ATPase-Plipid phosph 88.5 2.2 4.7E-05 56.9 11.2 41 787-831 630-670 (1057)
303 TIGR01456 CECR5 HAD-superfamil 88.1 0.84 1.8E-05 52.2 6.1 58 776-833 2-65 (321)
304 PF12710 HAD: haloacid dehalog 87.9 0.4 8.7E-06 49.8 3.1 38 791-832 92-129 (192)
305 PF11440 AGT: DNA alpha-glucos 87.4 51 0.0011 36.4 21.2 141 479-634 187-354 (355)
306 PLN02770 haloacid dehalogenase 87.1 6.5 0.00014 43.1 12.2 41 959-1002 165-205 (248)
307 COG0637 Predicted phosphatase/ 86.8 0.86 1.9E-05 49.1 5.0 35 793-831 91-125 (221)
308 PF12689 Acid_PPase: Acid Phos 86.7 0.95 2.1E-05 46.5 4.9 54 774-831 3-85 (169)
309 COG2327 WcaK Polysaccharide py 86.6 71 0.0015 37.2 28.7 85 544-637 266-355 (385)
310 PRK13582 thrH phosphoserine ph 86.4 1.6 3.4E-05 46.1 6.6 39 959-1004 132-170 (205)
311 TIGR01422 phosphonatase phosph 86.1 3 6.6E-05 45.7 8.9 44 960-1006 158-203 (253)
312 TIGR01680 Veg_Stor_Prot vegeta 85.9 2.3 5E-05 46.8 7.5 55 774-832 101-188 (275)
313 COG1703 ArgK Putative periplas 85.8 41 0.0009 37.7 17.0 119 190-343 61-180 (323)
314 TIGR03333 salvage_mtnX 2-hydro 85.4 1.9 4.2E-05 46.0 6.8 41 957-1004 142-182 (214)
315 PRK13478 phosphonoacetaldehyde 84.8 5.6 0.00012 44.0 10.3 42 960-1004 160-203 (267)
316 PF09419 PGP_phosphatase: Mito 84.6 2.5 5.4E-05 43.4 6.7 59 771-832 38-108 (168)
317 KOG0210 P-type ATPase [Inorgan 83.6 7.1 0.00015 47.5 10.7 41 787-831 657-697 (1051)
318 PTZ00445 p36-lilke protein; Pr 83.4 2.1 4.6E-05 45.2 5.7 45 953-1000 156-200 (219)
319 PF06437 ISN1: IMP-specific 5' 83.4 4.1 8.8E-05 46.5 8.2 198 773-986 146-379 (408)
320 KOG4626 O-linked N-acetylgluco 83.3 6.4 0.00014 47.3 10.0 178 470-668 754-942 (966)
321 PF03033 Glyco_transf_28: Glyc 83.3 1 2.2E-05 44.2 3.3 118 190-339 8-131 (139)
322 COG0241 HisB Histidinol phosph 83.3 2.2 4.8E-05 44.2 5.7 64 774-843 5-95 (181)
323 PF04413 Glycos_transf_N: 3-De 83.1 11 0.00023 39.6 10.9 72 306-394 95-166 (186)
324 TIGR01494 ATPase_P-type ATPase 82.9 3.1 6.8E-05 50.6 7.9 54 774-831 327-386 (499)
325 PLN02940 riboflavin kinase 82.4 1.8 4E-05 50.7 5.4 44 795-843 100-144 (382)
326 COG4359 Uncharacterized conser 81.9 3.2 7E-05 42.5 6.1 56 788-851 73-132 (220)
327 TIGR02245 HAD_IIID1 HAD-superf 80.7 3.8 8.3E-05 43.1 6.5 58 769-831 16-83 (195)
328 PF03767 Acid_phosphat_B: HAD 80.1 1.1 2.3E-05 48.7 2.2 55 773-831 71-157 (229)
329 COG5083 SMP2 Uncharacterized p 80.0 0.83 1.8E-05 52.3 1.3 78 765-850 366-453 (580)
330 COG3882 FkbH Predicted enzyme 79.3 4 8.6E-05 47.8 6.4 55 771-829 219-292 (574)
331 PF03031 NIF: NLI interacting 79.2 3.6 7.9E-05 41.6 5.7 52 775-831 1-74 (159)
332 PF10087 DUF2325: Uncharacteri 79.0 4.9 0.00011 37.2 6.0 82 510-606 2-90 (97)
333 TIGR03609 S_layer_CsaB polysac 76.4 1.2E+02 0.0026 34.0 17.5 101 475-598 172-276 (298)
334 PF05159 Capsule_synth: Capsul 75.9 19 0.00041 39.9 10.7 105 472-599 114-226 (269)
335 PF06925 MGDG_synth: Monogalac 75.6 14 0.00031 37.7 9.0 61 305-393 88-153 (169)
336 TIGR01544 HAD-SF-IE haloacid d 75.1 15 0.00033 40.9 9.4 39 789-831 122-160 (277)
337 KOG2116 Protein involved in pl 74.7 4.7 0.0001 48.8 5.5 75 767-850 523-614 (738)
338 TIGR02250 FCP1_euk FCP1-like p 74.3 10 0.00022 38.5 7.3 57 770-831 2-96 (156)
339 KOG0204 Calcium transporting A 73.8 16 0.00035 45.9 9.8 41 788-832 647-687 (1034)
340 KOG0208 Cation transport ATPas 73.2 9.3 0.0002 48.5 7.8 41 787-831 704-744 (1140)
341 PF08660 Alg14: Oligosaccharid 72.9 18 0.0004 37.3 8.8 31 305-335 91-127 (170)
342 PF15024 Glyco_transf_18: Glyc 70.6 11 0.00023 45.6 7.3 153 474-666 276-455 (559)
343 COG4996 Predicted phosphatase 68.1 13 0.00027 36.2 5.8 54 775-832 1-81 (164)
344 TIGR02193 heptsyl_trn_I lipopo 66.6 54 0.0012 37.1 11.9 100 474-598 179-280 (319)
345 PF06941 NT5C: 5' nucleotidase 66.1 5.7 0.00012 41.6 3.5 35 791-829 76-117 (191)
346 PF06888 Put_Phosphatase: Puta 65.8 25 0.00054 38.2 8.4 51 953-1005 144-197 (234)
347 KOG0853 Glycosyltransferase [C 65.0 12 0.00027 44.7 6.3 31 189-221 45-84 (495)
348 KOG1021 Acetylglucosaminyltran 63.9 44 0.00096 40.3 10.9 72 554-632 334-408 (464)
349 PRK10422 lipopolysaccharide co 63.5 82 0.0018 36.3 12.8 104 474-598 183-288 (352)
350 cd03789 GT1_LPS_heptosyltransf 63.0 29 0.00063 38.5 8.7 99 477-598 124-224 (279)
351 TIGR02251 HIF-SF_euk Dullard-l 60.5 21 0.00045 36.4 6.4 53 774-831 1-80 (162)
352 PF13242 Hydrolase_like: HAD-h 59.1 8.7 0.00019 33.5 2.9 44 962-1007 8-52 (75)
353 KOG1192 UDP-glucuronosyl and U 59.1 78 0.0017 38.2 12.2 160 474-664 277-453 (496)
354 PF00702 Hydrolase: haloacid d 58.5 5.5 0.00012 41.8 1.8 34 962-998 182-215 (215)
355 TIGR01548 HAD-SF-IA-hyp1 haloa 57.9 18 0.00038 37.9 5.5 45 793-842 111-155 (197)
356 TIGR01545 YfhB_g-proteo haloac 56.7 8.1 0.00018 41.3 2.7 44 955-1004 158-201 (210)
357 PRK10964 ADP-heptose:LPS hepto 56.7 93 0.002 35.3 11.6 46 544-598 234-279 (322)
358 PF03016 Exostosin: Exostosin 56.0 10 0.00022 42.4 3.6 70 555-628 228-300 (302)
359 PLN02177 glycerol-3-phosphate 54.5 35 0.00076 41.4 7.8 26 811-841 125-151 (497)
360 TIGR01449 PGP_bact 2-phosphogl 54.3 7.1 0.00015 41.2 1.8 41 960-1003 143-183 (213)
361 COG4087 Soluble P-type ATPase 54.3 19 0.00041 35.1 4.4 50 778-832 18-69 (152)
362 PF00702 Hydrolase: haloacid d 54.0 20 0.00043 37.6 5.1 41 787-831 126-166 (215)
363 PLN02770 haloacid dehalogenase 53.9 21 0.00047 39.0 5.5 48 791-843 111-158 (248)
364 COG0546 Gph Predicted phosphat 53.7 23 0.0005 37.9 5.6 46 791-841 92-137 (220)
365 PRK10725 fructose-1-P/6-phosph 52.6 15 0.00032 37.9 3.9 40 959-1001 143-182 (188)
366 PRK13582 thrH phosphoserine ph 52.5 7.3 0.00016 40.9 1.5 12 775-786 2-13 (205)
367 PF01075 Glyco_transf_9: Glyco 50.8 47 0.001 35.9 7.6 104 473-598 104-209 (247)
368 TIGR03351 PhnX-like phosphonat 50.5 20 0.00044 38.1 4.6 49 790-842 89-138 (220)
369 PRK13288 pyrophosphatase PpaX; 50.2 23 0.0005 37.5 4.9 47 790-841 84-130 (214)
370 KOG3120 Predicted haloacid deh 50.2 17 0.00038 38.6 3.7 52 951-1004 155-209 (256)
371 TIGR02195 heptsyl_trn_II lipop 50.2 1.1E+02 0.0023 35.0 10.7 102 472-597 171-276 (334)
372 TIGR01454 AHBA_synth_RP 3-amin 49.1 22 0.00047 37.4 4.5 47 790-841 77-123 (205)
373 TIGR01449 PGP_bact 2-phosphogl 48.6 25 0.00054 37.0 4.9 48 790-842 87-134 (213)
374 TIGR01662 HAD-SF-IIIA HAD-supe 47.8 47 0.001 32.1 6.3 41 959-1002 86-128 (132)
375 PF13419 HAD_2: Haloacid dehal 47.0 19 0.00041 36.0 3.5 49 789-842 78-126 (176)
376 TIGR03333 salvage_mtnX 2-hydro 46.9 15 0.00032 39.2 2.8 39 789-831 71-109 (214)
377 PF06888 Put_Phosphatase: Puta 45.5 59 0.0013 35.4 7.1 49 790-841 73-121 (234)
378 TIGR02253 CTE7 HAD superfamily 45.1 26 0.00056 37.2 4.4 48 790-842 96-143 (221)
379 TIGR01261 hisB_Nterm histidino 45.0 27 0.00059 35.6 4.3 72 928-1003 73-145 (161)
380 PRK10826 2-deoxyglucose-6-phos 43.4 34 0.00074 36.5 5.0 48 790-842 94-141 (222)
381 TIGR01422 phosphonatase phosph 43.4 33 0.00071 37.5 4.9 48 791-842 102-149 (253)
382 PF04392 ABC_sub_bind: ABC tra 42.8 1.4E+02 0.0031 33.3 10.1 69 528-598 147-218 (294)
383 KOG0206 P-type ATPase [General 42.7 86 0.0019 41.7 9.1 41 787-831 650-690 (1151)
384 PRK13222 phosphoglycolate phos 41.9 43 0.00094 35.5 5.5 47 790-841 95-141 (226)
385 TIGR01454 AHBA_synth_RP 3-amin 41.9 16 0.00034 38.5 2.0 41 959-1002 132-172 (205)
386 PLN03243 haloacid dehalogenase 41.6 36 0.00078 37.6 4.9 48 790-842 111-158 (260)
387 TIGR01656 Histidinol-ppas hist 40.9 36 0.00078 33.9 4.3 42 958-1002 101-142 (147)
388 COG4087 Soluble P-type ATPase 40.5 25 0.00054 34.3 2.9 37 960-1003 82-118 (152)
389 TIGR01428 HAD_type_II 2-haloal 40.3 39 0.00084 35.3 4.7 47 791-842 95-141 (198)
390 PHA02597 30.2 hypothetical pro 39.6 14 0.00031 38.5 1.3 39 959-1002 131-171 (197)
391 KOG1618 Predicted phosphatase 38.4 33 0.00072 38.4 3.8 62 772-833 33-100 (389)
392 PLN02575 haloacid dehalogenase 38.4 39 0.00084 39.5 4.6 47 791-842 219-265 (381)
393 cd07944 DRE_TIM_HOA_like 4-hyd 37.8 6E+02 0.013 28.1 14.4 125 486-630 104-238 (266)
394 TIGR03351 PhnX-like phosphonat 37.7 18 0.0004 38.4 1.8 40 960-1002 147-187 (220)
395 PRK13478 phosphonoacetaldehyde 36.8 48 0.001 36.5 5.0 48 791-842 104-151 (267)
396 PRK10748 flavin mononucleotide 36.6 25 0.00055 38.1 2.6 29 772-800 8-39 (238)
397 TIGR02009 PGMB-YQAB-SF beta-ph 36.3 37 0.0008 34.7 3.7 45 790-841 90-134 (185)
398 PRK09449 dUMP phosphatase; Pro 35.9 29 0.00062 37.0 2.9 41 960-1003 152-194 (224)
399 COG0546 Gph Predicted phosphat 35.5 25 0.00053 37.7 2.3 43 960-1005 147-192 (220)
400 PF01975 SurE: Survival protei 35.2 49 0.0011 35.0 4.4 37 166-220 1-37 (196)
401 PRK09552 mtnX 2-hydroxy-3-keto 35.1 23 0.00049 37.9 2.0 38 789-831 75-112 (219)
402 PRK13225 phosphoglycolate phos 35.0 52 0.0011 36.7 4.8 47 790-841 144-190 (273)
403 KOG2884 26S proteasome regulat 34.9 2.3E+02 0.0049 30.3 8.9 54 584-639 178-233 (259)
404 PF03308 ArgK: ArgK protein; 34.9 4.3E+02 0.0094 29.3 11.6 119 189-342 38-157 (266)
405 TIGR02201 heptsyl_trn_III lipo 34.7 2.4E+02 0.0051 32.3 10.4 102 476-598 183-286 (344)
406 PRK13015 3-dehydroquinate dehy 34.4 1E+02 0.0023 30.8 6.2 117 513-632 15-141 (146)
407 TIGR01509 HAD-SF-IA-v3 haloaci 34.3 60 0.0013 33.0 4.9 47 790-842 87-133 (183)
408 KOG2882 p-Nitrophenyl phosphat 33.8 58 0.0012 36.4 4.7 52 963-1016 229-281 (306)
409 PRK06091 membrane protein FdrA 33.7 6.4E+02 0.014 31.1 13.8 88 578-668 265-354 (555)
410 PRK13226 phosphoglycolate phos 33.6 62 0.0013 34.8 5.1 48 790-842 97-144 (229)
411 PRK13223 phosphoglycolate phos 33.2 54 0.0012 36.4 4.6 48 790-842 103-150 (272)
412 COG1887 TagB Putative glycosyl 32.9 7.7E+02 0.017 29.0 14.2 164 471-664 204-384 (388)
413 PF04230 PS_pyruv_trans: Polys 32.3 6.3E+02 0.014 26.8 17.4 46 544-598 238-283 (286)
414 PRK11590 hypothetical protein; 30.9 76 0.0016 33.7 5.1 47 791-843 98-145 (211)
415 COG4030 Uncharacterized protei 30.7 50 0.0011 35.2 3.5 35 959-997 191-225 (315)
416 PRK13398 3-deoxy-7-phosphohept 30.1 7E+02 0.015 27.7 12.6 110 478-598 28-141 (266)
417 TIGR01088 aroQ 3-dehydroquinat 29.4 1.4E+02 0.0031 29.7 6.1 116 513-631 13-138 (141)
418 PRK14988 GMP/IMP nucleotidase; 29.0 66 0.0014 34.5 4.3 48 790-842 95-142 (224)
419 PRK11587 putative phosphatase; 29.0 78 0.0017 33.6 4.9 46 790-841 85-130 (218)
420 COG0757 AroQ 3-dehydroquinate 28.8 2.2E+02 0.0048 28.2 7.2 82 513-596 14-97 (146)
421 PRK08942 D,D-heptose 1,7-bisph 28.8 33 0.00072 35.4 1.9 40 960-1002 105-144 (181)
422 COG2216 KdpB High-affinity K+ 28.8 36 0.00078 40.6 2.2 51 959-1018 497-547 (681)
423 COG0859 RfaF ADP-heptose:LPS h 28.5 2.1E+02 0.0045 32.8 8.6 99 475-598 176-277 (334)
424 PF02947 Flt3_lig: flt3 ligand 28.0 47 0.001 31.8 2.5 13 74-86 39-51 (135)
425 PRK10563 6-phosphogluconate ph 27.5 59 0.0013 34.5 3.6 34 772-809 2-35 (221)
426 PLN02779 haloacid dehalogenase 27.3 40 0.00087 37.8 2.3 41 961-1004 205-245 (286)
427 cd00466 DHQase_II Dehydroquina 27.0 1.5E+02 0.0032 29.6 5.7 116 513-631 13-138 (140)
428 TIGR02244 HAD-IG-Ncltidse HAD 26.9 1.1E+02 0.0024 35.3 5.7 49 790-843 186-242 (343)
429 PRK10916 ADP-heptose:LPS hepto 26.8 2.6E+02 0.0057 32.0 9.1 43 546-597 244-286 (348)
430 TIGR00715 precor6x_red precorr 26.8 4.1E+02 0.009 29.3 10.0 86 536-631 166-255 (256)
431 PF14980 TIP39: TIP39 peptide 26.4 44 0.00095 26.4 1.6 15 4-18 36-50 (51)
432 PF13419 HAD_2: Haloacid dehal 26.3 36 0.00079 33.9 1.6 41 959-1002 134-174 (176)
433 TIGR01361 DAHP_synth_Bsub phos 26.2 4.3E+02 0.0092 29.3 10.1 111 480-598 28-139 (260)
434 PRK06769 hypothetical protein; 26.0 1.1E+02 0.0024 31.4 5.2 42 960-1004 95-136 (173)
435 PRK00207 sulfur transfer compl 25.4 1.1E+02 0.0024 29.9 4.7 39 166-218 1-40 (128)
436 PRK06698 bifunctional 5'-methy 25.3 79 0.0017 38.1 4.5 48 790-842 332-379 (459)
437 TIGR01975 isoAsp_dipep isoaspa 25.3 1.1E+03 0.024 27.7 13.8 102 486-601 166-289 (389)
438 KOG0207 Cation transport ATPas 24.7 1.8E+02 0.0038 37.5 7.2 56 772-831 701-762 (951)
439 TIGR01549 HAD-SF-IA-v1 haloaci 24.0 1.2E+02 0.0026 30.0 4.9 44 792-841 68-111 (154)
440 KOG0207 Cation transport ATPas 23.9 63 0.0014 41.3 3.2 49 950-1007 766-814 (951)
441 TIGR02254 YjjG/YfnB HAD superf 22.7 1.2E+02 0.0026 31.9 4.9 47 790-842 99-145 (224)
442 PF05686 Glyco_transf_90: Glyc 22.6 1.6E+02 0.0035 34.7 6.2 84 583-666 229-317 (395)
443 PRK09449 dUMP phosphatase; Pro 22.5 1E+02 0.0022 32.7 4.3 47 790-842 97-143 (224)
444 PRK05395 3-dehydroquinate dehy 22.1 1.9E+02 0.0042 29.0 5.6 116 513-632 15-141 (146)
445 PF13407 Peripla_BP_4: Peripla 22.0 4.3E+02 0.0092 28.3 9.2 72 529-600 16-89 (257)
446 PRK10840 transcriptional regul 21.8 7E+02 0.015 26.0 10.6 65 569-633 51-126 (216)
447 PF12689 Acid_PPase: Acid Phos 21.8 2.3E+02 0.005 29.2 6.4 44 950-998 101-144 (169)
448 cd00218 GlcAT-I Beta1,3-glucur 21.6 1.5E+02 0.0032 32.0 5.1 83 913-997 32-116 (223)
449 COG1618 Predicted nucleotide k 21.4 9.2E+02 0.02 25.0 10.9 127 164-337 4-138 (179)
450 TIGR01493 HAD-SF-IA-v2 Haloaci 21.4 40 0.00087 34.3 0.8 10 776-785 1-10 (175)
451 TIGR02009 PGMB-YQAB-SF beta-ph 21.4 50 0.0011 33.7 1.6 39 960-1001 144-182 (185)
452 PRK04531 acetylglutamate kinas 21.4 1.9E+02 0.0042 34.1 6.5 125 473-632 35-162 (398)
453 TIGR01990 bPGM beta-phosphoglu 21.2 1.2E+02 0.0026 30.9 4.4 46 790-842 89-134 (185)
454 TIGR01509 HAD-SF-IA-v3 haloaci 20.8 74 0.0016 32.3 2.7 39 961-1002 143-181 (183)
455 TIGR01428 HAD_type_II 2-haloal 20.8 64 0.0014 33.6 2.2 41 960-1003 150-190 (198)
456 PRK13396 3-deoxy-7-phosphohept 20.7 1E+03 0.022 27.7 11.9 112 474-598 99-215 (352)
457 PHA02519 plasmid partition pro 20.6 1.9E+02 0.0041 34.1 6.2 55 146-217 78-142 (387)
458 TIGR02252 DREG-2 REG-2-like, H 20.5 1.3E+02 0.0028 31.4 4.5 47 790-842 107-153 (203)
459 PLN02177 glycerol-3-phosphate 20.4 66 0.0014 39.1 2.5 43 956-1005 173-215 (497)
460 KOG4549 Magnesium-dependent ph 20.4 2.2E+02 0.0049 27.8 5.4 55 774-832 18-85 (144)
461 PRK06698 bifunctional 5'-methy 20.2 57 0.0012 39.2 1.9 39 959-1002 386-424 (459)
462 KOG3109 Haloacid dehalogenase- 20.2 1E+02 0.0022 33.0 3.4 54 772-831 13-69 (244)
No 1
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=2.1e-210 Score=1906.71 Aligned_cols=1042 Identities=80% Similarity=1.282 Sum_probs=946.1
Q ss_pred CCCchhhhHHHHHHHhcCCCCCccccc--hhhhccCCCCCcchhhhhhhccCCcchhhHHHHHHHhccChhhhhhhhhhh
Q 001541 1 MAGNDWINSYLEAILDVGPGLDDAKSS--LLLRERGRFSPTRYFVEEVITGFDETDLHRSWVKAQATRSPQERNTRLENM 78 (1057)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (1057)
||||||||||||||||+|+|+++++++ +++||+|+||||||||||||||||||||||||+||+|||||||||||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (1050)
T TIGR02468 1 MAGNDWINSYLEAILDVGPGLDDAKSSALLLLRERGRFSPTRYFVEEVITGFDETDLHRTWVKAVATRSPQERNTRLENM 80 (1050)
T ss_pred CCcchHHHHHHHHHHhcCCCcccccccccccccccCccCCceeeEEeecccccchhhhhHHHHHHhhcChhhhhhhhhhh
Confidence 999999999999999999999999998 889999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhccCCCcCCCcccccccCCCC--CCCCCCCCChhhhhhh
Q 001541 79 CWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADMSEDLSEGEKGDIVSDVSAHGDS--TRSRLPRISSVDAMET 156 (1057)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 156 (1057)
|||||||||||||||||+|||+||||+|||+||||||+|||||||||||||.+++++.++++ +++||||++|++.|+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (1050)
T TIGR02468 81 CWRIWNLARKKKQLEWEEAQRLAKRRLERERGRREATADMSEDLSEGEKGDVAGDISVAGGEPSTKGRLPRISSNLEMET 160 (1050)
T ss_pred HHHHHHHhhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhHhhcCCcccCcccccccccCCCccccccccccccchhhc
Confidence 99999999999999999999999999999999999999999999999999999999999865 4899999999999999
Q ss_pred hhcccCCcceEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCccccc
Q 001541 157 WISQQKGKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEML 236 (1057)
Q Consensus 157 ~~~~~~~~~m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l 236 (1057)
|+++++.++|||+|||.||+|||+|||+||++|+|||.+||++||++|+++||||+|+|||++..+|.++|+|++|.|++
T Consensus 161 ~~~~~~~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~ 240 (1050)
T TIGR02468 161 WSDQQKEKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEML 240 (1050)
T ss_pred chhhcccCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999998889999999999999
Q ss_pred CCCCCCccccccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC
Q 001541 237 TPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYAD 316 (1057)
Q Consensus 237 ~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~ 316 (1057)
++.+++.+..++.+.+|++|+|+|+||.++|++|+.+|||+++|++.++.++.++.+.|++++..+++.+|||||+|||+
T Consensus 241 ~~~~~~~~~~~~~~~~g~rIvRip~GP~~~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw~ 320 (1050)
T TIGR02468 241 TPRSSENDGDEMGESSGAYIIRIPFGPRDKYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYAD 320 (1050)
T ss_pred cccccccccccccCCCCeEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcch
Confidence 88888888889999999999999999997799999999999999999999999999999999877777789999999999
Q ss_pred chHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhh
Q 001541 317 AGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLY 396 (1057)
Q Consensus 317 ~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y 396 (1057)
++++++.+++.+++|+|+|+|+++..+..+++.+|..+...++..|++.+|+.+|+.++..||.|||+|++++++||.+|
T Consensus 321 sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~lY 400 (1050)
T TIGR02468 321 AGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGLY 400 (1050)
T ss_pred HHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHHh
Confidence 99999999999999999999999999998888999877788889999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCc
Q 001541 397 DGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKP 476 (1057)
Q Consensus 397 ~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (1057)
++|+|.++++||+|+++||.|||++++++.|||||||++.|.|.+...............+..+.++.++++|+..+++|
T Consensus 401 ~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~~~pdkp 480 (1050)
T TIGR02468 401 DGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEIMRFFTNPRKP 480 (1050)
T ss_pred ccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchhhHHHHhhcccCCCc
Confidence 99999999999999999999999999999999999999999986543322211111123445678899999999999999
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCc
Q 001541 477 VILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSD 556 (1057)
Q Consensus 477 ~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~d 556 (1057)
+|+++||++++||++.||+||..+..+.+.+++++|+|++++.+.+......+..++.++++++++.++|.|+|++++++
T Consensus 481 vIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~FlG~v~~ed 560 (1050)
T TIGR02468 481 MILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYPKHHKQSD 560 (1050)
T ss_pred EEEEEcCCccccCHHHHHHHHHHhHhhccCCCEEEEEecCchhhhhhccchHHHHHHHHHHHHhCCCCeEEecCCCCHHH
Confidence 99999999999999999999999976556678878889988877777666778899999999999999999999999999
Q ss_pred HHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHH
Q 001541 557 VPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQL 636 (1057)
Q Consensus 557 l~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~ 636 (1057)
++.+|+.|++++||||+||++||||++++||||||+|||+|+.||+.|++.++.+|++|+|.|+++|+++|.++++++++
T Consensus 561 vp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~Dpel 640 (1050)
T TIGR02468 561 VPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADKQL 640 (1050)
T ss_pred HHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhCHHH
Confidence 99999999777789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCCCCCCCCCC-CCCCCCCCCCCCCccchhhhhccccccccCCCCCCC-
Q 001541 637 WARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRND-DGGETSESDSPGDSLRDIQDISLNLKFSLDGEKSGA- 714 (1057)
Q Consensus 637 ~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~l~~~~~~~~~l~~~~~~~~~~~- 714 (1057)
+++|++++++.+++|+|+.++++|++.|..+..++|+|++.. .+.+.++++||.|++++++||| |+||+||+....
T Consensus 641 r~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~ 718 (1050)
T TIGR02468 641 WAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEASEDESPGDSLRDIQDIS--LNLSVDGDKESNN 718 (1050)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccCcccccccccccccccccCccccccccccch--hhccccccccccc
Confidence 999999999999889999999999999999999999988643 2344567899999999999999 556666654333
Q ss_pred -CCCCCCCcccCchhhhhhHHHHHHHHhhccccccccCCCCCCccccCCCCCcCCcccCcceEEEEEecCCCCCcchHHH
Q 001541 715 -SGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHIFVISVDCDSTTGLLDAT 793 (1057)
Q Consensus 715 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kkLi~~DiDGTL~~~i~~~t 793 (1057)
+.+.+. ..+.+++..++.+++.++++++. ++.++.+++.+.+|||.++++++||++++|++-+....+.+
T Consensus 719 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~via~D~d~~~~~~~~l 789 (1050)
T TIGR02468 719 GSSNVEG---SGPPADRVAKIENAVRSWSKSPK------GSSAKAQQGSGAGKYPALRRRKRLFVIAVDCYDDKDLLQII 789 (1050)
T ss_pred ccccccc---ccchhhHHHHHHHHHhhcccccc------ccccccccccccccCccccccceEEEEEeccCCCCChHHHH
Confidence 222222 12244666777777777775443 67788899999999999999999999444444445577788
Q ss_pred HHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEeccCC-CCCCCccccccchhhcccc
Q 001541 794 KKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTLN-SEDGPFVVDFYYHSHIEYR 872 (1057)
Q Consensus 794 ~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~~~~-~~~~~~~~d~~~~~~i~~~ 872 (1057)
++.++++++....+.+.|+|+|||++.++.+++++.++++++||++||++|++|||++.. .++..+.+|..|+.||.++
T Consensus 790 ~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~r 869 (1050)
T TIGR02468 790 KNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYR 869 (1050)
T ss_pred HHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHcc
Confidence 888888874333467999999999999999999999997668999999999999997432 2344788999999999999
Q ss_pred cchhhHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCCCCccHHHHHHHHHHhcCcEEEEEeeCCeeEE
Q 001541 873 WGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRIN 952 (1057)
Q Consensus 873 w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lE 952 (1057)
|.++.+++++.+++....+++...+..++.++...++.||++|++.++...+.+++|++.|++++++|++++|+++++||
T Consensus 870 W~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k~SY~v~d~~~~~~v~elr~~Lr~~gLr~~~iys~~~~~LD 949 (1050)
T TIGR02468 870 WGGEGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDHCYAFKVKDPSKVPPVKELRKLLRIQGLRCHAVYCRNGTRLN 949 (1050)
T ss_pred CCcHHHHHHHHHHhhhcccccccccccceecChhhCCCceEEEEecCcccCccHHHHHHHHHhCCCceEEEeecCCcEee
Confidence 99999999999999877677766666788899999999999999888888889999999999999999999999866999
Q ss_pred EecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCC
Q 001541 953 VIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPN 1032 (1057)
Q Consensus 953 I~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~ 1032 (1057)
|+|.++|||+||+||+.+|||++++|+||+||++||||++||.+.+++|+|++.++...+++|+++||+++||||+||||
T Consensus 950 VlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~g~~~~~s~~l~~~~sY~~eDVvp~dspn 1029 (1050)
T TIGR02468 950 VIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKGVVSRGSEQLHANRSYPLDDVVPLDSPN 1029 (1050)
T ss_pred eeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEecccccchhhhcccCCCcccccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999986555677899999999999999999
Q ss_pred eEEccCCCChHHHHHHHHHhC
Q 001541 1033 IVQTPEDCTTSDIRSSLEQLG 1053 (1057)
Q Consensus 1033 ~~~vt~~~~~dgI~~aL~~~g 1053 (1057)
|.+++++|..++|..||++||
T Consensus 1030 i~~~~~~~~~~di~~aL~~l~ 1050 (1050)
T TIGR02468 1030 IVQATGGSSSDDISDALKKLS 1050 (1050)
T ss_pred eEeecCCCCHHHHHHHHHhcC
Confidence 999999999999999999986
No 2
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=1.3e-56 Score=542.54 Aligned_cols=461 Identities=28% Similarity=0.482 Sum_probs=354.4
Q ss_pred CcceEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHH--------hcCCCee----eEEEEecCCCCCCCCCccC
Q 001541 163 GKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARAL--------GSMPGVY----RVDLLTRQVSAPDVDWSYG 230 (1057)
Q Consensus 163 ~~~m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aL--------a~~Ggv~----~V~vit~~~~~~~~~~~y~ 230 (1057)
+|.|||+|||.||+++.++. +|+ ||+|||..||.+||++| +++| | +|+|+||...+.. ...+.
T Consensus 253 p~~~rIa~lS~Hg~~~~~~~-lG~-~DtGGq~vYV~elaraL~~~~~~~La~~G--~~v~~~V~I~TR~~~~~~-~~~~~ 327 (784)
T TIGR02470 253 PMVFNVVILSPHGYFGQENV-LGL-PDTGGQVVYILDQVRALENEMLQRIKLQG--LEITPKILIVTRLIPDAE-GTTCN 327 (784)
T ss_pred CccceEEEEecccccCCccc-cCC-CCCCCceeHHHHHHHHHHHHHHHHHHhcC--CCccceEEEEecCCCCcc-ccccc
Confidence 57899999999999888884 997 79999999999999985 6888 8 8889999974322 23445
Q ss_pred CcccccCCCCCCccccccCCCCCeEEEEccCCCcc-----cccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 001541 231 EPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKD-----KYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPV 305 (1057)
Q Consensus 231 ~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~-----~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~ 305 (1057)
++.|. +...++++|+|+|++|.. +|++|+.+|||+..|.+.+..++.+. ...
T Consensus 328 ~~~e~------------~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~-----------~~~ 384 (784)
T TIGR02470 328 QRLEK------------VYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAE-----------LQG 384 (784)
T ss_pred ccccc------------ccCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-----------cCC
Confidence 55433 344579999999999842 57899999999999999888776531 124
Q ss_pred cceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecC
Q 001541 306 WPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITST 385 (1057)
Q Consensus 306 ~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S 385 (1057)
+||+||+|||+++++|..+++.+++|+++|.|+++..+.. ..|. .+..+...|++..++.+|..++..||.||++|
T Consensus 385 ~pDlIHahy~d~glva~lla~~lgVP~v~t~HsL~~~K~~---~~g~-~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT 460 (784)
T TIGR02470 385 KPDLIIGNYSDGNLVASLLARKLGVTQCTIAHALEKTKYP---DSDI-YWQEFEDKYHFSCQFTADLIAMNAADFIITST 460 (784)
T ss_pred CCCEEEECCCchHHHHHHHHHhcCCCEEEECCcchhhccc---cccc-ccccchhHHHhhhhhhHHHHHHhcCCEEEECc
Confidence 6999999999999999999999999999999999776632 2222 34445668888889989999999999999999
Q ss_pred HHHHH------HHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCC-
Q 001541 386 RQEIE------EQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASP- 458 (1057)
Q Consensus 386 ~~~~~------~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~- 458 (1057)
.+++. .+|+.|..|... . ..++..| .+.+.+|+.|||||+|...|.|....... ...........
T Consensus 461 ~qEi~~~~~~v~qY~s~~~ft~p--~--Ly~vvnG---id~~~~Ki~VVpPGVD~~iF~P~~~~~~r-~~~~~~~ie~ll 532 (784)
T TIGR02470 461 YQEIAGTKDSVGQYESHQAFTMP--G--LYRVVHG---IDVFDPKFNIVSPGADESIYFPYSDKEKR-LTNLHPEIEELL 532 (784)
T ss_pred HHHhhhhhhhhhhhhhccccccc--c--eeeeecC---ccCCcCCeEEECCCcChhhcCCCCchhhh-hhhhhcchhhhc
Confidence 98866 355555544321 0 0112222 22366799999999999999875432100 00000000000
Q ss_pred -CCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCC-CcccchhhHHHHHHHHHH
Q 001541 459 -DPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDG-IDEMSSTSASVLLSVLKL 536 (1057)
Q Consensus 459 -~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~-~~~~~~~~~~~~~~l~~l 536 (1057)
.+....+...++..+++|+|+++||+++.||++.|++||.++..+++..++ +|+|++.+ ......+......++..+
T Consensus 533 ~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~L-VIVGGg~~~~~s~d~ee~~~i~~L~~l 611 (784)
T TIGR02470 533 FSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNL-VVVAGKLDAKESKDREEQAEIEKMHNL 611 (784)
T ss_pred cchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEE-EEEeCCcccccccchhHHHHHHHHHHH
Confidence 000111122233367899999999999999999999999988655555555 45665532 222222333467889999
Q ss_pred HHHcCCCCCEEeCCCC-CCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEe
Q 001541 537 IDKYDLYGQVAYPKHH-KQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLV 615 (1057)
Q Consensus 537 ~~~~~l~~~V~f~g~v-~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv 615 (1057)
++++++.++|.|+|.. +..++.++|+.++..+||||+||++|+||++++||||||+|||+|+.||+.|+|.++.+|++|
T Consensus 612 a~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLV 691 (784)
T TIGR02470 612 IDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHI 691 (784)
T ss_pred HHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEe
Confidence 9999999999999975 667899999864434479999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHH
Q 001541 616 DPHDQQSVADALLKLV----ADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRI 664 (1057)
Q Consensus 616 ~p~d~~~la~aI~~ll----~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~ 664 (1057)
+|.|+++++++|.+++ .|++.|++++++|++++ ++|||+.++++++.+.
T Consensus 692 dp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 692 DPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999999999999876 69999999999999999 7999999999999887
No 3
>PLN00142 sucrose synthase
Probab=100.00 E-value=9.5e-56 Score=534.69 Aligned_cols=456 Identities=28% Similarity=0.472 Sum_probs=348.5
Q ss_pred CcceEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHH--------HHHhcCCCeeeE----EEEecCCCCCCCCCccC
Q 001541 163 GKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELA--------RALGSMPGVYRV----DLLTRQVSAPDVDWSYG 230 (1057)
Q Consensus 163 ~~~m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA--------~aLa~~Ggv~~V----~vit~~~~~~~~~~~y~ 230 (1057)
+|-|||+|||.||++++.+ ++|+ ||||||..||.++| ++|+++| |+| +|+||...+.. ...|.
T Consensus 277 p~~~~i~~iS~Hg~~~~~~-~lG~-~DtGGQ~vYVl~~aral~~el~~~l~~~G--~~v~~~v~i~TR~i~~~~-~~~~~ 351 (815)
T PLN00142 277 PMVFNVVIFSPHGYFGQAN-VLGL-PDTGGQVVYILDQVRALENEMLLRIKQQG--LDIKPQILIVTRLIPDAK-GTTCN 351 (815)
T ss_pred hHhHhhheecccccccccc-cCCC-CCCCCceehHHHHHHHHHHHHHHHHHhcC--CCccceeEEEEeccCCcc-CCccc
Confidence 4668999999999999999 5997 99999999998766 5677788 866 59999885443 45556
Q ss_pred CcccccCCCCCCccccccCCCCCeEEEEccCCCcc----cccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCc
Q 001541 231 EPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKD----KYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVW 306 (1057)
Q Consensus 231 ~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~----~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~ 306 (1057)
++.|.+ ...++++|+|+|+||.+ ++++|+.+|||+..|.+.+..++.+. ...+
T Consensus 352 ~~~e~v------------~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~~~~-----------~~~~ 408 (815)
T PLN00142 352 QRLEKV------------SGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEILAE-----------LQGK 408 (815)
T ss_pred Ccceec------------cCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHHHHh-----------cCCC
Confidence 655443 44579999999999952 56799999999999999988776531 1246
Q ss_pred ceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCH
Q 001541 307 PVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTR 386 (1057)
Q Consensus 307 pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~ 386 (1057)
||+||+|||++|++|..+++.+|+|+|+|+|+++..+.. . +...+......|++..|+.+|..++..||.||++|.
T Consensus 409 PDlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~---~-~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIasT~ 484 (815)
T PLN00142 409 PDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYP---D-SDIYWKKFDDKYHFSCQFTADLIAMNHADFIITSTY 484 (815)
T ss_pred CCEEEECCccHHHHHHHHHHHhCCCEEEEcccchhhhcc---c-cCCcccccchhhhhhhchHHHHHHHHhhhHHHhCcH
Confidence 999999999999999999999999999999999877752 2 223455567788999999999999999999999999
Q ss_pred HHHH------HHHhhhCCCC-hHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCC------CCCCCCCC
Q 001541 387 QEIE------EQWRLYDGFD-PVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMD------GETEGNED 453 (1057)
Q Consensus 387 ~~~~------~~~~~y~~~~-~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~------~~~~~~~~ 453 (1057)
+++. .||..|..|. |. | +|+-.|+ +.+.+++.|||||+|...|.|...... ..+.....
T Consensus 485 qEi~g~~~~i~qy~sh~~f~~p~----L-~rvv~GI---d~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~ 556 (815)
T PLN00142 485 QEIAGSKDTVGQYESHTAFTLPG----L-YRVVHGI---DVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLY 556 (815)
T ss_pred HHHhcccchhhhhhcccccccch----h-hhhhccc---cccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcC
Confidence 9886 3555554443 22 2 4454444 335669999999999999886542110 00011000
Q ss_pred CCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCC-CCcccchhhHHHHHH
Q 001541 454 NPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRD-GIDEMSSTSASVLLS 532 (1057)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~-~~~~~~~~~~~~~~~ 532 (1057)
.+....+...++..+++|+|+++||+++.||++.||+|++++..+++..++ +|+|++. .......+......+
T Consensus 557 -----~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~L-VIVGgg~d~~~s~d~ee~~el~~ 630 (815)
T PLN00142 557 -----SPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNL-VVVGGFIDPSKSKDREEIAEIKK 630 (815)
T ss_pred -----ChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEE-EEEECCccccccccHHHHHHHHH
Confidence 011111112222356788999999999999999999999988654444444 4667652 211111112234577
Q ss_pred HHHHHHHcCCCCCEEeCCCCC-CCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCc
Q 001541 533 VLKLIDKYDLYGQVAYPKHHK-QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDN 611 (1057)
Q Consensus 533 l~~l~~~~~l~~~V~f~g~v~-~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~ 611 (1057)
+.++++++++.++|.|+|.+. ..+..++|+..+...|+||+||++|+||++++||||||+|||+|+.||+.|+|.++.+
T Consensus 631 L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~t 710 (815)
T PLN00142 631 MHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVS 710 (815)
T ss_pred HHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCc
Confidence 889999999999999998654 2333444442111129999999999999999999999999999999999999999999
Q ss_pred eEEeCCCCHHHHHHHHHHH----HhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHH
Q 001541 612 GLLVDPHDQQSVADALLKL----VADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRI 664 (1057)
Q Consensus 612 Gllv~p~d~~~la~aI~~l----l~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~ 664 (1057)
|++|+|+|+++++++|.++ +.|++.|++++++|++++ ++|||+.++++++++.
T Consensus 711 G~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 711 GFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred EEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999999999999998765 469999999999999999 7999999999999977
No 4
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=3.1e-53 Score=502.29 Aligned_cols=438 Identities=51% Similarity=0.872 Sum_probs=345.1
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccc
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 245 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1057)
+||++||.||+++++++.+|++|+.||+++|+.+|+++|+++|++|+|+|+|+....+.+...|..+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~~~~~----------- 69 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYAQPIE----------- 69 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccCCCee-----------
Confidence 589999999999999999999999999999999999999999943499999986432222223322221
Q ss_pred cccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHH
Q 001541 246 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 325 (1057)
Q Consensus 246 ~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~ 325 (1057)
...+|++++|+|+++. .+..+..+|+++..|...++..+.+. ..+|||||+|++.++.++.+++
T Consensus 70 ---~~~~gv~v~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~------------~~~~DvIH~h~~~~~~~~~~~~ 133 (439)
T TIGR02472 70 ---RIAPGARIVRLPFGPR-RYLRKELLWPYLDELADNLLQHLRQQ------------GHLPDLIHAHYADAGYVGARLS 133 (439)
T ss_pred ---EeCCCcEEEEecCCCC-CCcChhhhhhhHHHHHHHHHHHHHHc------------CCCCCEEEEcchhHHHHHHHHH
Confidence 1136999999998776 45566667777766665555444320 1369999999988889999999
Q ss_pred hcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHH
Q 001541 326 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1057)
Q Consensus 326 ~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~ 405 (1057)
+.+++|+|+|.|+++......+...+. ....+...|.+..++..|+.+++.+|.||++|.+++.+++..+.++.+
T Consensus 134 ~~~~~p~V~t~H~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~---- 208 (439)
T TIGR02472 134 RLLGVPLIFTGHSLGREKRRRLLAAGL-KPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQYALYDSYQP---- 208 (439)
T ss_pred HHhCCCEEEecccccchhhhhcccCCC-ChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHHHHHhccCCCc----
Confidence 999999999999875543222222222 222233445556666678899999999999998776665544433333
Q ss_pred HHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCC
Q 001541 406 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 485 (1057)
Q Consensus 406 ~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~ 485 (1057)
.++.|||||||.+.|.|..... ........+++++..+++++|+++||+.
T Consensus 209 -----------------~ki~vIpnGvd~~~f~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~i~~vGrl~ 258 (439)
T TIGR02472 209 -----------------ERMQVIPPGVDLSRFYPPQSSE-------------ETSEIDNLLAPFLKDPEKPPILAISRPD 258 (439)
T ss_pred -----------------cceEEECCCcChhhcCCCCccc-------------cchhHHHHHHhhccccCCcEEEEEcCCc
Confidence 3899999999999987643110 1112233445555667789999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhh
Q 001541 486 PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAA 565 (1057)
Q Consensus 486 ~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa 565 (1057)
+.||++.||+||..+....+.+++++|+|++++.+.+.....++..++..+++++++.++|.|+|+++.++++.+|+.|+
T Consensus 259 ~~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~~~~a~ 338 (439)
T TIGR02472 259 RRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRLAA 338 (439)
T ss_pred ccCCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHHHHHHh
Confidence 99999999999987643334456666778888777776655667778889999999999999999999999999999874
Q ss_pred cCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 001541 566 KTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGL 645 (1057)
Q Consensus 566 ~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~ 645 (1057)
...|+||+||..|+||++++||||||+|||+|+.||+.|++.++.+|++|+|.|+++++++|.+++++++++++++++++
T Consensus 339 ~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~a~ 418 (439)
T TIGR02472 339 RSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSDSSQWQLWSRNGI 418 (439)
T ss_pred hcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 44489999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHh-hcCCHHHHHHHHHHHHH
Q 001541 646 KNI-HLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 646 ~~v-~~fsw~~~a~~~l~~~~ 665 (1057)
+++ ++|||+.++++|+++++
T Consensus 419 ~~~~~~fsw~~~~~~~~~l~~ 439 (439)
T TIGR02472 419 EGVRRHYSWDAHVEKYLRILQ 439 (439)
T ss_pred HHHHHhCCHHHHHHHHHHHhC
Confidence 998 79999999999998863
No 5
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=1.1e-49 Score=496.67 Aligned_cols=610 Identities=13% Similarity=0.140 Sum_probs=406.1
Q ss_pred CeEEEEccCCCc--c---cccccccCCCChhH------HHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHH
Q 001541 253 GAYIIRIPFGPK--D---KYIAKELLWPHIPE------FVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSA 321 (1057)
Q Consensus 253 gv~i~rip~~p~--~---~~l~k~~l~~~l~~------f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a 321 (1057)
++.++.++..+. + ....+..+||.+.. |-...+....++-+.+.+.+...- ..-|+|..|......++
T Consensus 70 ~~~~~~v~l~~~~~~~~y~gf~n~~lWp~~H~~~~~~~~~~~~w~~Y~~vN~~fA~~~~~~~-~~~d~vwvhDYhl~l~p 148 (726)
T PRK14501 70 ELGLVPVFLSAEEVDRYYEGFCNSTLWPLFHYFPEYTEFEDRFWESYERVNQRFAEAIAAIA-RPGDVVWVHDYQLMLLP 148 (726)
T ss_pred CceEEEEeCCHHHHHHHHHHhhhccccchhcccCcccCcCHHHHHHHHHHHHHHHHHHHHhc-CCCCEEEEeCchhhhHH
Confidence 455666655331 1 12456778886532 222333334444444444333321 12489999998777777
Q ss_pred HHHHhc-CCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCC
Q 001541 322 ALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFD 400 (1057)
Q Consensus 322 ~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~ 400 (1057)
..+.++ ...++-|..|-.++...- +. ...+...+ -..+-.+|.|-..|......+....
T Consensus 149 ~~lr~~~~~~~igfFlH~pfP~~~~--f~-----------~lp~~~~l---l~~ll~~Dligf~t~~~~r~Fl~~~---- 208 (726)
T PRK14501 149 AMLRERLPDARIGFFLHIPFPSFEV--FR-----------LLPWREEI---LEGLLGADLIGFHTYDYVRHFLSSV---- 208 (726)
T ss_pred HHHHhhCCCCcEEEEeeCCCCChHH--Hh-----------hCCChHHH---HHHHhcCCeEEeCCHHHHHHHHHHH----
Confidence 777654 357899999988774321 00 01111111 2367889999999988777655432
Q ss_pred hHHHHHHHHh-HhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEE
Q 001541 401 PVLERKLRAR-IKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVIL 479 (1057)
Q Consensus 401 ~~~~~~l~~~-~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il 479 (1057)
.+.|... ...++...|+.. ++.++|+|||++.|.+..... ........++.. .+++++|+
T Consensus 209 ---~~~l~~~~~~~~~~~~gr~~-~v~v~p~GID~~~f~~~~~~~-------------~~~~~~~~lr~~--~~~~~~il 269 (726)
T PRK14501 209 ---LRVLGYETELGEIRLGGRIV-RVDAFPMGIDYDKFHNSAQDP-------------EVQEEIRRLRQD--LRGRKIIL 269 (726)
T ss_pred ---HHHcCCccCCCeEEECCEEE-EEEEEECeEcHHHHHHHhcCc-------------hHHHHHHHHHHH--cCCCEEEE
Confidence 1111111 113455556544 799999999999997542110 001111122222 35778999
Q ss_pred EEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EEecC-----CCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001541 480 ALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNR-----DGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 551 (1057)
Q Consensus 480 ~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~--~l~L-IvG~~-----~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~ 551 (1057)
++||+++.||+..+++||+.+.+..+.. +++| ++|.+ ++++++.....+..++|+....+.++.+.++|.++
T Consensus 270 ~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~ 349 (726)
T PRK14501 270 SIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRS 349 (726)
T ss_pred EecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCC
Confidence 9999999999999999999987654432 3444 44421 33344444444455555555555567677889999
Q ss_pred CCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHc-----CCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHH
Q 001541 552 HKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH-----GLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADA 626 (1057)
Q Consensus 552 v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~-----G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~a 626 (1057)
+++++++++|+.| ||||+||++||||++++||||| |+||+++..|+..+++ .|++|+|+|++++|++
T Consensus 350 ~~~~~l~~ly~~a----Dv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~----~~llv~P~d~~~la~a 421 (726)
T PRK14501 350 LPFEELVALYRAA----DVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA----EALLVNPNDIEGIAAA 421 (726)
T ss_pred CCHHHHHHHHHhc----cEEEecccccccCcccceEEEEcCCCCceEEEecccchhHHhC----cCeEECCCCHHHHHHH
Confidence 9999999999999 9999999999999999999999 6688888899998884 4999999999999999
Q ss_pred HHHHHhCH-HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCCCCCCCCCCCCCCCCCCCCCCCccchhhhhcccccc
Q 001541 627 LLKLVADK-QLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKF 705 (1057)
Q Consensus 627 I~~ll~d~-~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~l~~ 705 (1057)
|.++|+++ +++.+..+++++.+.+|||..|+++|++.|.++...+....... +.
T Consensus 422 i~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~~~~~~~~~--------------------~~----- 476 (726)
T PRK14501 422 IKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKAFASKP--------------------IT----- 476 (726)
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhcccccc--------------------CC-----
Confidence 99999964 45555566788888999999999999999998765432111100 00
Q ss_pred ccCCCCCCCCCCCCCCcccCchhhhhhHHHHHHHHhhccccccccCCCCCCccccCCCCCcCCcccCcceEEEEEecCCC
Q 001541 706 SLDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHIFVISVDCDS 785 (1057)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kkLi~~DiDGTL 785 (1057)
....+.++.+|+ .+.+|+|++|+||||
T Consensus 477 -------------------------~~~~~~~~~~y~----------------------------~~~~rLi~~D~DGTL 503 (726)
T PRK14501 477 -------------------------PAAAEEIIARYR----------------------------AASRRLLLLDYDGTL 503 (726)
T ss_pred -------------------------ccCHHHHHHHHH----------------------------hccceEEEEecCccc
Confidence 112456777777 466799999999999
Q ss_pred C--------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEeccCCCCCC
Q 001541 786 T--------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTLNSEDG 857 (1057)
Q Consensus 786 ~--------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~~~~~~~~ 857 (1057)
+ ..+++.++++|++|.++ +|+.|+|+|||++..+.+++..+++ ++||+||++|+.++.
T Consensus 504 ~~~~~~~~~~~~~~~~~~~L~~L~~d---~g~~V~ivSGR~~~~l~~~~~~~~l------~liaenG~~i~~~~~----- 569 (726)
T PRK14501 504 VPFAPDPELAVPDKELRDLLRRLAAD---PNTDVAIISGRDRDTLERWFGDLPI------HLVAEHGAWSRAPGG----- 569 (726)
T ss_pred cCCCCCcccCCCCHHHHHHHHHHHcC---CCCeEEEEeCCCHHHHHHHhCCCCe------EEEEeCCEEEeCCCC-----
Confidence 5 24789999999999985 5899999999999999999977655 699999999986542
Q ss_pred Cccccccchhh--cccccchhhHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCCCCc---cHHHHHHH
Q 001541 858 PFVVDFYYHSH--IEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTP---PVKELRKV 932 (1057)
Q Consensus 858 ~~~~d~~~~~~--i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~---~~~el~~~ 932 (1057)
.|... ....| .+.+..++..+..... ....+ ....+++|++.+.+... ..+++.+.
T Consensus 570 ------~w~~~~~~~~~w-~~~v~~il~~~~~~~~--------gs~ie----~k~~~l~~~~r~~d~~~~~~~a~~l~~~ 630 (726)
T PRK14501 570 ------EWQLLEPVATEW-KDAVRPILEEFVDRTP--------GSFIE----EKEASLAWHYRNADPELGEARANELILA 630 (726)
T ss_pred ------ceEECCCcchhH-HHHHHHHHHHHHhcCC--------CcEEE----EcceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 12111 12334 2344444433322111 01111 11355777765433111 12345555
Q ss_pred HHHh--cCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCc---ceEEEeCCCc
Q 001541 933 LRIQ--ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGV---HKTVILKGIC 1007 (1057)
Q Consensus 933 l~~~--~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~a---g~gVAMgNa~ 1007 (1057)
+... ...+.++ +.+ +++||+|+++|||.|+++|++ +++++.+++ +||+.| | ++||+.+ +.+|+|||+.
T Consensus 631 l~~~~~~~~~~v~-~g~-~~veV~p~~vnKG~al~~ll~--~~~~d~vl~-~GD~~n-D-e~Mf~~~~~~~~~v~vG~~~ 703 (726)
T PRK14501 631 LSSLLSNAPLEVL-RGN-KVVEVRPAGVNKGRAVRRLLE--AGPYDFVLA-IGDDTT-D-EDMFRALPETAITVKVGPGE 703 (726)
T ss_pred HHHHhcCCCeEEE-ECC-eEEEEEECCCCHHHHHHHHHh--cCCCCEEEE-ECCCCC-h-HHHHHhcccCceEEEECCCC
Confidence 5442 2234433 344 589999999999999999999 777788877 888888 8 9999986 7999999865
Q ss_pred hhhhhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHHhC
Q 001541 1008 SSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 1053 (1057)
Q Consensus 1008 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~~g 1053 (1057)
..+.|...++ +++...|+.+-
T Consensus 704 -----------------------s~A~~~l~~~--~eV~~~L~~l~ 724 (726)
T PRK14501 704 -----------------------SRARYRLPSQ--REVRELLRRLL 724 (726)
T ss_pred -----------------------CcceEeCCCH--HHHHHHHHHHh
Confidence 2334454443 66888887753
No 6
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=1.9e-45 Score=457.02 Aligned_cols=529 Identities=13% Similarity=0.103 Sum_probs=373.7
Q ss_pred ceEEEEcCCCchHHHHHHHhc-CCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecC
Q 001541 307 PVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITST 385 (1057)
Q Consensus 307 pDvIh~h~~~~~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S 385 (1057)
-|+|-.|......+...+.+. .+.++.|..|..++..-- +. .....+. -...+-.||.|-+.|
T Consensus 148 ~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs~e~--fr-----------~lp~r~~---il~gll~aDligF~t 211 (797)
T PLN03063 148 GDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSEI--YK-----------TLPSRSE---LLRAVLTADLIGFHT 211 (797)
T ss_pred CCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCCHHH--Hh-----------hCCCHHH---HHHHHhcCCEEEeCC
Confidence 379999988777777777654 468999999988774421 00 0000111 123678999999999
Q ss_pred HHHHHHHHhhhCCCChHHHHHHHHh-HhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHH
Q 001541 386 RQEIEEQWRLYDGFDPVLERKLRAR-IKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 464 (1057)
Q Consensus 386 ~~~~~~~~~~y~~~~~~~~~~l~~~-~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1057)
......+..... +.|... ...++...|+.. ++.+||+|||++.|.+..... .......
T Consensus 212 ~~y~r~Fl~~~~-------r~l~~~~~~~~i~~~gr~~-~I~viP~GID~~~f~~~~~~~-------------~~~~~~~ 270 (797)
T PLN03063 212 YDFARHFLSACT-------RILGVEGTHEGVVDQGKVT-RVAVFPIGIDPERFINTCELP-------------EVKQHMK 270 (797)
T ss_pred HHHHHHHHHHHH-------HHhCccccCCceEECCeEE-EEEEEecccCHHHHHHHhcCh-------------hHHHHHH
Confidence 988877665321 111111 123455555555 899999999999887532110 0111122
Q ss_pred HHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEEE-e-----cCCCCcccchhhHHHHHHHHHH
Q 001541 465 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTLIM-G-----NRDGIDEMSSTSASVLLSVLKL 536 (1057)
Q Consensus 465 ~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~--~l~LIv-G-----~~~~~~~~~~~~~~~~~~l~~l 536 (1057)
.++..+ .++++|+++||+++.||+..+|+||+.+.+.++.. +++|+. + +++++++++....++.++++..
T Consensus 271 ~lr~~~--~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~ 348 (797)
T PLN03063 271 ELKRFF--AGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGR 348 (797)
T ss_pred HHHHhc--CCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcc
Confidence 233322 46889999999999999999999999998666654 355443 2 2334444444444444445554
Q ss_pred HHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCc----EEEcCCCCchhhhhcCCce
Q 001541 537 IDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLP----IVATKNGGPVDIHRVLDNG 612 (1057)
Q Consensus 537 ~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~P----VVat~~Gg~~eiv~~~~~G 612 (1057)
....++.+.+++.++++.+++.++|+.| ||||+||++|||||+++||||||+| +|+|..+|..+.+ +.+|
T Consensus 349 ~g~~~~~pv~~l~~~v~~~el~aly~~A----DvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l--~~~a 422 (797)
T PLN03063 349 FGSVSSVPIHHLDCSVDFNYLCALYAIT----DVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL--GAGA 422 (797)
T ss_pred cccCCCceeEEecCCCCHHHHHHHHHhC----CEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhhh--cCCe
Confidence 4555666777778899999999999999 9999999999999999999999999 9999988888875 4579
Q ss_pred EEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCCCCCCCCCCCCCCCCCCCCCCC
Q 001541 613 LLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGD 691 (1057)
Q Consensus 613 llv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 691 (1057)
++|||+|++++|++|.++|+ +++++++..+..++++.+++|..|++.|++.|.++...+.......
T Consensus 423 llVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~~~~~~~~~------------- 489 (797)
T PLN03063 423 LLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEAELRTRNI------------- 489 (797)
T ss_pred EEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhhhhhcccCC-------------
Confidence 99999999999999999999 6778888888889999999999999999999987765432111100
Q ss_pred ccchhhhhccccccccCCCCCCCCCCCCCCcccCchhhhhhHHHHHHHHhhccccccccCCCCCCccccCCCCCcCCccc
Q 001541 692 SLRDIQDISLNLKFSLDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALR 771 (1057)
Q Consensus 692 ~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 (1057)
+. ......++.+|+ .
T Consensus 490 -------~~------------------------------~l~~~~~~~~y~----------------------------~ 504 (797)
T PLN03063 490 -------PL------------------------------ELPEQDVIQQYS----------------------------K 504 (797)
T ss_pred -------CC------------------------------CCCHHHHHHHHH----------------------------h
Confidence 00 112345777887 5
Q ss_pred CcceEEEEEecCCCC-----------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEE
Q 001541 772 RRKHIFVISVDCDST-----------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFI 840 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL~-----------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI 840 (1057)
+++++||+|+||||. ..+++.+.++|++|.+. ++..|+|.|||+...+..++...++ +++
T Consensus 505 a~~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d---~~~~V~IvSGR~~~~L~~~~~~~~l------~l~ 575 (797)
T PLN03063 505 SNNRLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSD---PKTTVVVLSRSGKDILDKNFGEYNI------WLA 575 (797)
T ss_pred ccCeEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcC---CCCEEEEEeCCCHHHHHHHhCCCCC------cEE
Confidence 667999999999994 12678999999999987 7888999999999999999987666 589
Q ss_pred eCCCcEEEeccCCCCCCCccccccch----hhcccccch---hhHHHHHHHhhhcccccccccccccccccccccCcceE
Q 001541 841 CNSGSDLYYSTLNSEDGPFVVDFYYH----SHIEYRWGG---EGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCY 913 (1057)
Q Consensus 841 ~~nGa~I~~~~~~~~~~~~~~d~~~~----~~i~~~w~~---e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 913 (1057)
++||+++...++ .|. ......|.. ..++.+..+.+++..+.| .+.+
T Consensus 576 aeHG~~~r~~~~-----------~w~~~~~~~~~~~w~~~v~~~l~~~~~rtpGs~iE~K----------------~~sl 628 (797)
T PLN03063 576 AENGMFLRHTSG-----------EWVTTMPEHMNLDWVDGVKNVFKYFTDRTPRSYVEKS----------------ETSL 628 (797)
T ss_pred EeCCEEEecCCC-----------ceeeccccccChhHHHHHHHHHHHHHHhCCCcEEEEc----------------CeEE
Confidence 999999875431 121 111223432 346677778888888777 5678
Q ss_pred EEEecCCCCC---ccHHHHHHHHHHh---cCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHh------CCCcccEEEE
Q 001541 914 AFSVQKPGMT---PPVKELRKVLRIQ---ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRW------GVELSKMVVF 981 (1057)
Q Consensus 914 ~~~~~~~~~~---~~~~el~~~l~~~---~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~l------gI~~e~viaf 981 (1057)
+||+++.+.. ....++...+... ...+.++ .+...+||.|.++|||.|++.|++++ +-+.+ ++.+
T Consensus 629 a~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~--~Gk~vvEvrp~gvnKG~Av~~ll~~~~~~~~~~~~~d-fvl~ 705 (797)
T PLN03063 629 VWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVV--RGQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTPID-FVFC 705 (797)
T ss_pred EEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEE--ECCeEEEEEcCCCChHHHHHHHHHHhhhccccCCCCC-EEEE
Confidence 8998755321 3344555554221 1234443 34459999999999999999999987 22333 4444
Q ss_pred ecCC-CCCCccccccCcce
Q 001541 982 VGES-GDTDYEGLLGGVHK 999 (1057)
Q Consensus 982 ~GD~-~n~D~~eML~~ag~ 999 (1057)
+||. .+ | ++||+..+-
T Consensus 706 ~Gdd~~~-D-EdmF~~l~~ 722 (797)
T PLN03063 706 SGYFLEK-D-EDVYTFFEP 722 (797)
T ss_pred eCCCCCC-c-HHHHHhccc
Confidence 7775 66 8 999998763
No 7
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=2e-43 Score=438.15 Aligned_cols=581 Identities=14% Similarity=0.141 Sum_probs=397.5
Q ss_pred cccccCCCChhH-----------HHHHHHHHHHHHHHHHHhhhcCCCCCcc--eEEEEcCCCchHHHHHHHhc-CCCCEE
Q 001541 268 IAKELLWPHIPE-----------FVDGALNHIIRMSNVLGEQIGGGKPVWP--VAIHGHYADAGDSAALLSGA-LNVPML 333 (1057)
Q Consensus 268 l~k~~l~~~l~~-----------f~~~~l~~~~~~~k~L~~~~~~~~~~~p--DvIh~h~~~~~~~a~~l~~~-~~iP~V 333 (1057)
..+..+||.+.. |-...+....+.-+.+.+.+... .+| |+|-.|......+..++.++ ...++-
T Consensus 152 f~n~~LWPlfH~~~~~~~~~~~~f~~~~w~~Y~~vN~~FA~~v~~~--~~~~~d~VWVhDYhL~llP~~LR~~~~~~~Ig 229 (854)
T PLN02205 152 FCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEV--INPEDDFVWIHDYHLMVLPTFLRKRFNRVKLG 229 (854)
T ss_pred hhhccccchhccCCCCCccccccccHHHHHHHHHHHHHHHHHHHHH--hCCCCCEEEEeCchhhHHHHHHHhhCCCCcEE
Confidence 456778876532 22333333444444444433322 224 79999988777777777654 457899
Q ss_pred EEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhH--
Q 001541 334 FTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI-- 411 (1057)
Q Consensus 334 ~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~-- 411 (1057)
|..|..++..-- + ....+... -...+-.||.|=..|...+..+... +.+.|....
T Consensus 230 fFlHiPFPs~ei--f-----------r~LP~r~e---iL~glL~aDlIGFht~~yar~Fl~~-------~~r~lgl~~~~ 286 (854)
T PLN02205 230 FFLHSPFPSSEI--Y-----------KTLPIREE---LLRALLNSDLIGFHTFDYARHFLSC-------CSRMLGLSYES 286 (854)
T ss_pred EEecCCCCChHH--H-----------hhCCcHHH---HHHHHhcCCeEEecCHHHHHHHHHH-------HHHHhCCcccC
Confidence 999988764311 0 01111111 1236789999999999888776553 223332221
Q ss_pred ---hccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCC
Q 001541 412 ---KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKK 488 (1057)
Q Consensus 412 ---~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~K 488 (1057)
..|+...|+.. ++.++|.|||+..|....... .......+++..+..+++++|+.++|+|+.|
T Consensus 287 ~~g~~~~~~~Gr~v-~v~~~PigId~~~~~~~~~~~-------------~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~K 352 (854)
T PLN02205 287 KRGYIGLEYYGRTV-SIKILPVGIHMGQLQSVLSLP-------------ETEAKVKELIKQFCDQDRIMLLGVDDMDIFK 352 (854)
T ss_pred CCcceeEEECCcEE-EEEEEeCeEcHHHHHHHhcCh-------------hHHHHHHHHHHHhccCCCEEEEEccCccccc
Confidence 13555667666 899999999999886322110 1223344555554445789999999999999
Q ss_pred CHHHHHHHHHhcccccCCC--cEEEE--E----ecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHH
Q 001541 489 NITTLVKAFGECRPLRELA--NLTLI--M----GNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEI 560 (1057)
Q Consensus 489 gi~~Ll~A~~~l~~~~~~~--~l~LI--v----G~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~l 560 (1057)
||...+.||+++++.+|.. +++|| + +.++++++++.+..+..++|+....+.++.+.+++...++++++.++
T Consensus 353 Gi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~al 432 (854)
T PLN02205 353 GISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAY 432 (854)
T ss_pred CHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHH
Confidence 9999999999998777765 45543 2 45567888989999999999999999999998888899999999999
Q ss_pred HHHhhcCCcEEEEcCCCCCCCHHHHHHHHc--------------------CCcEEEcCCCCchhhhhcCCceEEeCCCCH
Q 001541 561 YRLAAKTKGVFINPAFIEPFGLTLIEAAAH--------------------GLPIVATKNGGPVDIHRVLDNGLLVDPHDQ 620 (1057)
Q Consensus 561 y~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~--------------------G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~ 620 (1057)
|+.| ||++++|+++||+|+++||+|| |+.||+..+|+..++ ..+++|||+|.
T Consensus 433 y~~A----Dv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L----~~Ai~VNP~d~ 504 (854)
T PLN02205 433 YVVA----ECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL----SGAIRVNPWNI 504 (854)
T ss_pred HHhc----cEEEeccccccccccchheeEEccCccccccccccccccCCCCceEeeeccchhHHh----CcCeEECCCCH
Confidence 9999 9999999999999999999997 567788888888877 35899999999
Q ss_pred HHHHHHHHHHHhCHH-HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCCCCCCCCCCCCCCCCCCCCCCCccchhhhh
Q 001541 621 QSVADALLKLVADKQ-LWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDI 699 (1057)
Q Consensus 621 ~~la~aI~~ll~d~~-~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~ 699 (1057)
+++|+||.++|+++. +++...+..++++..++...|++.|+.-++.....+........+ +
T Consensus 505 ~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~~~~~~~~g------------------~ 566 (854)
T PLN02205 505 DAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRRCWGIG------------------F 566 (854)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhhhhcccc------------------c
Confidence 999999999999655 444445555666689999999999999998764332111110000 0
Q ss_pred cccccc-ccCCCCCCCCCCCCCCcccCchhhhhhHHHHHHHHhhccccccccCCCCCCccccCCCCCcCCcccCcceEEE
Q 001541 700 SLNLKF-SLDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHIFV 778 (1057)
Q Consensus 700 ~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kkLi~ 778 (1057)
.++.+. .+|..+ +.-..+.++.+|+ +..+++|+
T Consensus 567 g~~~~~~~~~~~~------------------~~l~~~~i~~~y~----------------------------~~~~rlI~ 600 (854)
T PLN02205 567 GLSFRVVALDPNF------------------RKLSMEHIVSAYK----------------------------RTTTRAIL 600 (854)
T ss_pred ccccccccccccc------------------cccCHHHHHHHHH----------------------------hhcCeEEE
Confidence 000000 011110 1234567888888 56789999
Q ss_pred EEecCCCC------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCC-CCCCCCCeEEeCCCcEEEecc
Q 001541 779 ISVDCDST------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGH-LSPSDFDAFICNSGSDLYYST 851 (1057)
Q Consensus 779 ~DiDGTL~------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lg-l~~~~~D~lI~~nGa~I~~~~ 851 (1057)
+|+||||. ..+++.++++|++|.+. +|+.|+|+|||++..+.+++.... + ++||+||+++..++
T Consensus 601 LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d---~g~~VaIvSGR~~~~L~~~f~~~~~l------~laaEHG~~ir~~~ 671 (854)
T PLN02205 601 LDYDGTLMPQASIDKSPSSKSIDILNTLCRD---KNNMVFIVSARSRKTLADWFSPCEKL------GIAAEHGYFLRLKR 671 (854)
T ss_pred EecCCcccCCccccCCCCHHHHHHHHHHHhc---CCCEEEEEeCCCHHHHHHHhCCCCCe------EEEEeCCEEEEeCC
Confidence 99999994 25778999999998765 689999999999999999997653 3 69999999998764
Q ss_pred CCCCCCCccccccchh---hcccccchh---hHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCCCCc-
Q 001541 852 LNSEDGPFVVDFYYHS---HIEYRWGGE---GLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTP- 924 (1057)
Q Consensus 852 ~~~~~~~~~~d~~~~~---~i~~~w~~e---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~- 924 (1057)
.. .|.. .....|... .++.+..+.+++..+.+ .+.++|++++.+...
T Consensus 672 ~~----------~w~~~~~~~~~~w~~~v~~i~~~y~ertpGs~IE~K----------------~~slv~HyR~adpd~~ 725 (854)
T PLN02205 672 DV----------EWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDK----------------ETALVWCYEDADPDFG 725 (854)
T ss_pred Cc----------eeeecchhhhHHHHHHHHHHHHHHhcCCCchhheec----------------ceEEEEehhhCChHHh
Confidence 21 1211 111223211 12233344455555444 566778876543111
Q ss_pred --cHHHHHHHHHHhcCc-EEEEEeeCCeeEEEecCCCCHHHHHHHHHH---HhCCCcccEEEEecCCCCCCccccccCcc
Q 001541 925 --PVKELRKVLRIQALR-CHVIYCQNGSRINVIPVLASRSQALRYLYL---RWGVELSKMVVFVGESGDTDYEGLLGGVH 998 (1057)
Q Consensus 925 --~~~el~~~l~~~~~~-~~v~~s~~~~~lEI~p~gasKg~AL~~L~~---~lgI~~e~viaf~GD~~n~D~~eML~~ag 998 (1057)
..+++...+...... ...+.+.. .++||.|+++|||.|++.|++ ++|++++.+++ +||+.| | ++||+.++
T Consensus 726 ~~qa~el~~~l~~~l~~~~~~v~~G~-~vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~-~GDD~n-D-edMF~~~~ 801 (854)
T PLN02205 726 SCQAKELLDHLESVLANEPVTVKSGQ-NIVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLC-IGDDRS-D-EDMFEVIT 801 (854)
T ss_pred hhhhHHHHHHHHHHHhcCceEEEECC-cEEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEE-EcCCcc-H-HHHHHHhh
Confidence 123454444432111 12234444 499999999999999999975 46999988888 777777 7 99999886
No 8
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=2.2e-43 Score=434.21 Aligned_cols=529 Identities=13% Similarity=0.114 Sum_probs=383.3
Q ss_pred ceEEEEcCCCchHHHHHHHhc-CCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecC
Q 001541 307 PVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITST 385 (1057)
Q Consensus 307 pDvIh~h~~~~~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S 385 (1057)
=|+|-+|......+..++.+. .+.++-|..|..++..-- |+..-+-+.-...+-.||.|=+.|
T Consensus 232 gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~Ei----------------fr~LP~r~elL~glL~aDlIGFqT 295 (934)
T PLN03064 232 GDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEI----------------HRTLPSRSELLRSVLAADLVGFHT 295 (934)
T ss_pred CCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCCChHH----------------HhhCCcHHHHHHHHhcCCeEEeCC
Confidence 379999988777777777655 457899999988764311 111100001123677999999999
Q ss_pred HHHHHHHHhhhCCCChHHHHHHHHh-HhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHH
Q 001541 386 RQEIEEQWRLYDGFDPVLERKLRAR-IKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 464 (1057)
Q Consensus 386 ~~~~~~~~~~y~~~~~~~~~~l~~~-~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1057)
...+..+.... .+.|... ...||...|+.. ++.++|.|||++.|....... .......
T Consensus 296 ~~y~rhFl~~c-------~rlLg~~~~~~~v~~~Gr~v-~V~~~PiGID~~~f~~~~~~~-------------~v~~~~~ 354 (934)
T PLN03064 296 YDYARHFVSAC-------TRILGLEGTPEGVEDQGRLT-RVAAFPIGIDSDRFIRALETP-------------QVQQHIK 354 (934)
T ss_pred HHHHHHHHHHH-------HHHhCccccCCeEEECCEEE-EEEEEeCEEcHHHHHHHhcCh-------------hHHHHHH
Confidence 98877766532 2222111 124566667665 789999999999997432110 1122233
Q ss_pred HHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc--EEEEE------ecCCCCcccchhhHHHHHHHHHH
Q 001541 465 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELAN--LTLIM------GNRDGIDEMSSTSASVLLSVLKL 536 (1057)
Q Consensus 465 ~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~--l~LIv------G~~~~~~~~~~~~~~~~~~l~~l 536 (1057)
+++..+ .++++|++++|+|+.|||...++||+++++.+|... ++||. ++++++++++.+..+..++|+..
T Consensus 355 ~lr~~~--~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~ 432 (934)
T PLN03064 355 ELKERF--AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGR 432 (934)
T ss_pred HHHHHh--CCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhh
Confidence 444443 367899999999999999999999999987666642 44431 45567778888888899999999
Q ss_pred HHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHc-----CCcEEEcCCCCchhhhhcCCc
Q 001541 537 IDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH-----GLPIVATKNGGPVDIHRVLDN 611 (1057)
Q Consensus 537 ~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~-----G~PVVat~~Gg~~eiv~~~~~ 611 (1057)
+.+.++.+.+++...++++++.++|+.| ||||+||++|||||+++||||| |++||+...|...++ +..
T Consensus 433 fg~~~w~Pv~~~~~~l~~eeL~AlY~~A----DV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L---~~~ 505 (934)
T PLN03064 433 FGTLTAVPIHHLDRSLDFHALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSL---GAG 505 (934)
T ss_pred ccCCCcceEEEeccCCCHHHHHHHHHhC----CEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHHHh---CCc
Confidence 9999999988888999999999999999 9999999999999999999999 777785555555544 346
Q ss_pred eEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCCCCCCCCCCCCCCCCCCCCCC
Q 001541 612 GLLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPG 690 (1057)
Q Consensus 612 Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 690 (1057)
+++|||+|++++|++|.++|+ ++++++++.+..++++..|||..|++.|++.+..+...+.......
T Consensus 506 AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~~~~~~~~~~~------------ 573 (934)
T PLN03064 506 AILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTVVEAQLRTRQV------------ 573 (934)
T ss_pred eEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHhhhhcccccc------------
Confidence 999999999999999999999 6788888888999999999999999999999987643321111000
Q ss_pred CccchhhhhccccccccCCCCCCCCCCCCCCcccCchhhhhhHHHHHHHHhhccccccccCCCCCCccccCCCCCcCCcc
Q 001541 691 DSLRDIQDISLNLKFSLDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPAL 770 (1057)
Q Consensus 691 ~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 770 (1057)
. +....+.++.+|+
T Consensus 574 ---------~-----------------------------~~l~~~~~~~~y~---------------------------- 587 (934)
T PLN03064 574 ---------P-----------------------------PQLPPEDAIQRYL---------------------------- 587 (934)
T ss_pred ---------C-----------------------------CCCCHHHHHHHHH----------------------------
Confidence 0 0122456777887
Q ss_pred cCcceEEEEEecCCCC-----C------------cchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCC
Q 001541 771 RRRKHIFVISVDCDST-----T------------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSP 833 (1057)
Q Consensus 771 ~~~kkLi~~DiDGTL~-----~------------~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~ 833 (1057)
.+.+++||+|+||||. . .+++.++++|+.|.+. ++..|+|.|||+...+..++..+++
T Consensus 588 ~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~d---p~n~VaIVSGR~~~~Le~~fg~~~L-- 662 (934)
T PLN03064 588 QSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSD---PKTTIVVLSGSDRSVLDENFGEFDM-- 662 (934)
T ss_pred hccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhC---CCCeEEEEeCCCHHHHHHHhCCCCc--
Confidence 5677999999999993 1 1567889999999987 7888999999999999999988776
Q ss_pred CCCCeEEeCCCcEEEeccCCCCCCCccccccch----hhcccccch---hhHHHHHHHhhhccccccccccccccccccc
Q 001541 834 SDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYH----SHIEYRWGG---EGLRKTLVRWASQVTDKKAESGEKVLTPAEQ 906 (1057)
Q Consensus 834 ~~~D~lI~~nGa~I~~~~~~~~~~~~~~d~~~~----~~i~~~w~~---e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (1057)
+++++||+++..++. .|. ......|.. ..++.+..+++++..+.|
T Consensus 663 ----~LaAEHG~~~R~~~~-----------~w~~~~~~~~~~~W~~~v~~ile~~~eRtPGS~IE~K------------- 714 (934)
T PLN03064 663 ----WLAAENGMFLRHTKG-----------EWMTTMPEHLNMDWVDSVKHVFEYFTERTPRSHFETR------------- 714 (934)
T ss_pred ----eEEeeCCeEEecCCC-----------cceeccccccchHHHHHHHHHHHHHHhcCCCcEEEEc-------------
Confidence 599999999876531 121 111223432 345677778888888777
Q ss_pred ccCcceEEEEecCCCCC---ccHHHHHHHHHH-h--cCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhC----C-Cc
Q 001541 907 LSTNYCYAFSVQKPGMT---PPVKELRKVLRI-Q--ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWG----V-EL 975 (1057)
Q Consensus 907 ~~~~~k~~~~~~~~~~~---~~~~el~~~l~~-~--~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lg----I-~~ 975 (1057)
.+.++||++..+.. ....++.+.+.. . ...+.++ .+...+||.|.++|||.|++.|+.++. . ..
T Consensus 715 ---~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~--~Gk~VVEVrP~gvnKG~Av~~ll~~~~~~~~~~~~ 789 (934)
T PLN03064 715 ---ETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVV--QGSRSVEVRPVGVTKGAAIDRILGEIVHSKSMTTP 789 (934)
T ss_pred ---CcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEE--eCCeEEEEEcCCCCHHHHHHHHHHhhhhccccCCC
Confidence 56788998755311 124455555532 1 2234443 444599999999999999999999762 1 12
Q ss_pred ccEEEEecCCCCCCccccccCcc
Q 001541 976 SKMVVFVGESGDTDYEGLLGGVH 998 (1057)
Q Consensus 976 e~viaf~GD~~n~D~~eML~~ag 998 (1057)
-++|.++||+-.|| ++||+...
T Consensus 790 ~DFvlc~GDd~~~D-EdmF~~l~ 811 (934)
T PLN03064 790 IDYVLCIGHFLGKD-EDIYTFFE 811 (934)
T ss_pred CCEEEEeCCCCCCc-HHHHHHHh
Confidence 24555588865447 99999874
No 9
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=3.8e-40 Score=386.66 Aligned_cols=402 Identities=26% Similarity=0.376 Sum_probs=292.9
Q ss_pred EEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccc
Q 001541 168 IVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDD 247 (1057)
Q Consensus 168 I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~ 247 (1057)
|++|+.|.. |...+-..+.||+++|+.+||++|+++| |+|+|+|+....... +.
T Consensus 1 ~~~~~~~~~----~~~~~~~~~~GG~e~~v~~la~~L~~~G--~~V~v~~~~~~~~~~------~~-------------- 54 (405)
T TIGR03449 1 VAMISMHTS----PLQQPGTGDAGGMNVYILETATELARRG--IEVDIFTRATRPSQP------PV-------------- 54 (405)
T ss_pred CeEEeccCC----ccccCCCcCCCCceehHHHHHHHHhhCC--CEEEEEecccCCCCC------Cc--------------
Confidence 678887876 3333322346999999999999999999 999999975321110 00
Q ss_pred cCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhc
Q 001541 248 MGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGA 327 (1057)
Q Consensus 248 ~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~ 327 (1057)
....+|+.+++++.++.. ...+..+..++..|.... +...++. ...+||+||+|++..+.++..+++.
T Consensus 55 ~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~----------~~~~~~~-~~~~~Diih~h~~~~~~~~~~~~~~ 122 (405)
T TIGR03449 55 VEVAPGVRVRNVVAGPYE-GLDKEDLPTQLCAFTGGV----------LRAEARH-EPGYYDLIHSHYWLSGQVGWLLRDR 122 (405)
T ss_pred cccCCCcEEEEecCCCcc-cCCHHHHHHHHHHHHHHH----------HHHHhhc-cCCCCCeEEechHHHHHHHHHHHHh
Confidence 111358899998765541 111111111111111111 1111111 1146999999998778888888888
Q ss_pred CCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHH
Q 001541 328 LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKL 407 (1057)
Q Consensus 328 ~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l 407 (1057)
+++|+|+|.|++...+...+ ..... ... ... ...|...+..+|.|+++|+...+.+...+.
T Consensus 123 ~~~p~v~t~h~~~~~~~~~~------~~~~~-~~~-~~~-~~~e~~~~~~~d~vi~~s~~~~~~~~~~~~---------- 183 (405)
T TIGR03449 123 WGVPLVHTAHTLAAVKNAAL------ADGDT-PEP-EAR-RIGEQQLVDNADRLIANTDEEARDLVRHYD---------- 183 (405)
T ss_pred cCCCEEEeccchHHHHHHhc------cCCCC-Cch-HHH-HHHHHHHHHhcCeEEECCHHHHHHHHHHcC----------
Confidence 99999999998753221100 00000 000 111 113566889999999999987776544332
Q ss_pred HHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCC
Q 001541 408 RARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPK 487 (1057)
Q Consensus 408 ~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~ 487 (1057)
....++.+||||+|.+.|.+.+. .....++..++++++|+++||+.+.
T Consensus 184 ------------~~~~ki~vi~ngvd~~~~~~~~~--------------------~~~~~~~~~~~~~~~i~~~G~l~~~ 231 (405)
T TIGR03449 184 ------------ADPDRIDVVAPGADLERFRPGDR--------------------ATERARLGLPLDTKVVAFVGRIQPL 231 (405)
T ss_pred ------------CChhhEEEECCCcCHHHcCCCcH--------------------HHHHHhcCCCCCCcEEEEecCCCcc
Confidence 22238999999999988864311 1123334445678999999999999
Q ss_pred CCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhc
Q 001541 488 KNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAK 566 (1057)
Q Consensus 488 Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~ 566 (1057)
||++.+++|+..+.+..+..++.+ |+|+..... .....++.+++..+++.++|.|+|+++.+++..+|+.|
T Consensus 232 K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g------~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~a-- 303 (405)
T TIGR03449 232 KAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSG------LATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAA-- 303 (405)
T ss_pred cCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCc------chHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhC--
Confidence 999999999999865444434665 677532210 01246788889999999999999999999999999999
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 001541 567 TKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLK 646 (1057)
Q Consensus 567 ~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~ 646 (1057)
|++|+||..|+||++++||||+|+|||+++.||..|++.++.+|++++|+|+++++++|.+++++++.++++++++++
T Consensus 304 --d~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~ 381 (405)
T TIGR03449 304 --DVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDDPRTRIRMGAAAVE 381 (405)
T ss_pred --CEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCHHHHHHHHHHHHHccc
Q 001541 647 NIHLFSWPEHCKTYLSRIAGCK 668 (1057)
Q Consensus 647 ~v~~fsw~~~a~~~l~~~~~~~ 668 (1057)
.+++|||+.++++|+++|.++.
T Consensus 382 ~~~~fsw~~~~~~~~~~y~~~~ 403 (405)
T TIGR03449 382 HAAGFSWAATADGLLSSYRDAL 403 (405)
T ss_pred HHHhCCHHHHHHHHHHHHHHHh
Confidence 8888999999999999998764
No 10
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=4.1e-39 Score=390.79 Aligned_cols=518 Identities=17% Similarity=0.164 Sum_probs=333.3
Q ss_pred hhhhhHHHHH--hhhh-----hhhhhhHHHHHHHHHHHHHhhccchhhhhhhhccCCCcCCCcccccccCCCCCCCCCCC
Q 001541 75 LENMCWRIWN--LARQ-----KKQLEGEAAQRMAKRRLERERGRREATADMSEDLSEGEKGDIVSDVSAHGDSTRSRLPR 147 (1057)
Q Consensus 75 ~~~~~~~~~~--~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (1057)
-..|-|.+|- |-|= .+-|--+||.-+-+--+.|+..-.++--+...... ..
T Consensus 408 ~~~~~~~~~~~lll~id~~~~~~~~~~~~a~~lr~~~~~~~~~~~~~~~~~~~~~~----------------------~~ 465 (977)
T PLN02939 408 ADDMPSEFWSRILLLIDGWLLEKKISNNDAKLLREMVWKRDGRIREAYLSCKGKNE----------------------RE 465 (977)
T ss_pred hhhCCHHHHHHHHHHHHHHHHhccCChhhHHHHHHHHHhhhhhHHHHHHHHhcCch----------------------HH
Confidence 4579999994 2221 22267778887777777777777776665432100 01
Q ss_pred CChhhhhhhhhcccCCcceEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCC
Q 001541 148 ISSVDAMETWISQQKGKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDW 227 (1057)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~ 227 (1057)
..+ .+..+....+.++|+|+||+.... +-..+||..-+|..|.++|++.| |+|.|+++.+..-..+.
T Consensus 466 ~~~--~~~~~~~~~~~~~mkILfVasE~a---------P~aKtGGLaDVv~sLPkAL~~~G--hdV~VIlP~Y~~i~~~~ 532 (977)
T PLN02939 466 AVE--NFLKLTLSGTSSGLHIVHIAAEMA---------PVAKVGGLADVVSGLGKALQKKG--HLVEIVLPKYDCMQYDQ 532 (977)
T ss_pred HHH--HHHHhccCCCCCCCEEEEEEcccc---------cccccccHHHHHHHHHHHHHHcC--CeEEEEeCCCcccChhh
Confidence 111 344455566677899999996554 23679999999999999999999 99999999774221111
Q ss_pred ccCCcc-c-----ccCCCCCCccccccCCCCCeEEEEccC-CCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhc
Q 001541 228 SYGEPT-E-----MLTPRNSDDFMDDMGESSGAYIIRIPF-GPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIG 300 (1057)
Q Consensus 228 ~y~~~~-e-----~l~~~~~~~~~~~~~~~~gv~i~rip~-~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~ 300 (1057)
..+... + .+. +....+.--....+|+.++.+.. .|. .+..+..+..+-+.+. ++.. +.++..+.+.
T Consensus 533 ~~~~~~~~~~~~~~~~-g~~~~~~v~~~~~~GV~vyfId~~~~~-~fF~R~~iYg~~Dn~~----RF~~-FsrAaLe~~~ 605 (977)
T PLN02939 533 IRNLKVLDVVVESYFD-GNLFKNKIWTGTVEGLPVYFIEPQHPS-KFFWRAQYYGEHDDFK----RFSY-FSRAALELLY 605 (977)
T ss_pred hhcccccceEEEEeec-CceeEEEEEEEEECCeeEEEEecCCch-hccCCCCCCCCccHHH----HHHH-HHHHHHHHHH
Confidence 000000 0 000 00000000012235777777753 121 2333444433322221 1111 1111222221
Q ss_pred CCCCCcceEEEEcCCCchHHHHHHHh------cCCCCEEEEecCCchhhH---HHHHHhhhcchHHHH--HHH--HHHHH
Q 001541 301 GGKPVWPVAIHGHYADAGDSAALLSG------ALNVPMLFTGHSLGRDKL---EQLLKQARLSRDEIN--ATY--KIMRR 367 (1057)
Q Consensus 301 ~~~~~~pDvIh~h~~~~~~~a~~l~~------~~~iP~V~t~H~l~~~~~---~~l~~~g~~~~~~~~--~~y--k~~~r 367 (1057)
.. ..+|||||+|.|.++.++.++.. ..++|+|+|+|++...-. ..+...|. ....+. ... .+..+
T Consensus 606 ~~-~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL-~~~~l~~~d~le~~~~~~ 683 (977)
T PLN02939 606 QS-GKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGL-DVHQLDRPDRMQDNAHGR 683 (977)
T ss_pred hc-CCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCC-CHHHccChhhhhhccCCc
Confidence 11 25799999999998887554332 246899999999854221 11111111 111110 000 01122
Q ss_pred HHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCC-CC
Q 001541 368 IEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDM-DG 446 (1057)
Q Consensus 368 i~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~-~~ 446 (1057)
+..-+..+..||.|+|+|+...++....+ +. .+.. .++.+..++.+||||||++.|.|..+.. +.
T Consensus 684 iN~LK~GIv~AD~VtTVSptYA~EI~te~-G~--GL~~-----------~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~ 749 (977)
T PLN02939 684 INVVKGAIVYSNIVTTVSPTYAQEVRSEG-GR--GLQD-----------TLKFHSKKFVGILNGIDTDTWNPSTDRFLKV 749 (977)
T ss_pred hHHHHHHHHhCCeeEeeeHHHHHHHHHHh-cc--chHH-----------HhccccCCceEEecceehhhcCCcccccccc
Confidence 32334467789999999999888876522 11 0111 1344456899999999999998754211 00
Q ss_pred CCCCCCCCCCCCCCchHHHHHhhhCC---CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCccc
Q 001541 447 ETEGNEDNPASPDPPIWSEIMRFFTN---PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEM 522 (1057)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~ 522 (1057)
.........+. ........+++.+ ++.|+|++|||+.+.||++.+++|+..+.. . ++. +|+|+|++.
T Consensus 750 ~Ys~~dl~GK~--~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~--dvqLVIvGdGp~~--- 820 (977)
T PLN02939 750 QYNANDLQGKA--ANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--L--GGQFVLLGSSPVP--- 820 (977)
T ss_pred ccChhhhhhhh--hhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--c--CCEEEEEeCCCcH---
Confidence 00000000000 1112234455554 356999999999999999999999998753 2 334 578988642
Q ss_pred chhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCc
Q 001541 523 SSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP 602 (1057)
Q Consensus 523 ~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~ 602 (1057)
.+...+..++.++++.++|.|+|.++......+|+.| |+||+||.+||||++++|||+||+|+|++++||+
T Consensus 821 -----~~e~eL~~La~~l~l~drV~FlG~~de~lah~IYAaA----DIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL 891 (977)
T PLN02939 821 -----HIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAAS----DMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGL 891 (977)
T ss_pred -----HHHHHHHHHHHHcCCCCeEEEEeccCHHHHHHHHHhC----CEEEECCCccCCcHHHHHHHHCCCCEEEecCCCC
Confidence 2456788899999998999999998766678999999 9999999999999999999999999999999999
Q ss_pred hhhhhc---------CCceEEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccC
Q 001541 603 VDIHRV---------LDNGLLVDPHDQQSVADALLKLVA----DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKP 669 (1057)
Q Consensus 603 ~eiv~~---------~~~Gllv~p~d~~~la~aI~~ll~----d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~~ 669 (1057)
.|+|.+ +.+|++|+|.|+++|+++|.+++. +++.|++++++++. +.|||+.++++|+++|..+..
T Consensus 892 ~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am~--~dFSWe~~A~qYeeLY~~ll~ 969 (977)
T PLN02939 892 NDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDMN--IDFSWDSSASQYEELYQRAVA 969 (977)
T ss_pred cceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH--hcCCHHHHHHHHHHHHHHHHH
Confidence 998865 578999999999999999999875 79999999987653 689999999999999998865
Q ss_pred C
Q 001541 670 R 670 (1057)
Q Consensus 670 ~ 670 (1057)
+
T Consensus 970 ~ 970 (977)
T PLN02939 970 R 970 (977)
T ss_pred h
Confidence 4
No 11
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=1.1e-39 Score=389.16 Aligned_cols=444 Identities=18% Similarity=0.188 Sum_probs=286.3
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccc
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 245 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1057)
|||+|||.+.+ | ...+||...+|..|+++|+++| |+|+|+|+.+.. ......... .+...+.-...
T Consensus 1 m~i~~vs~e~~----P-----~~k~GGl~~~v~~L~~~L~~~G--~~V~v~~p~y~~--~~~~~~~~~-~~~~~~~~~~~ 66 (466)
T PRK00654 1 MKILFVASECA----P-----LIKTGGLGDVVGALPKALAALG--HDVRVLLPGYPA--IREKLRDAQ-VVGRLDLFTVL 66 (466)
T ss_pred CeEEEEEcccc----c-----CcccCcHHHHHHHHHHHHHHCC--CcEEEEecCCcc--hhhhhcCce-EEEEeeeEEEE
Confidence 79999998876 1 1349999999999999999999 999999987532 110000000 00000000000
Q ss_pred cccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHH
Q 001541 246 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 325 (1057)
Q Consensus 246 ~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~ 325 (1057)
......+|+++++++.. .+..+..+..+.+.....+ ++. +...+.+... ..+|||||+|+|.++.++.+++
T Consensus 67 ~~~~~~~gv~v~~v~~~---~~~~~~~~y~~~d~~~r~~--~f~---~~~~~~~~~~-~~~pDiiH~h~w~~~~~~~~l~ 137 (466)
T PRK00654 67 FGHLEGDGVPVYLIDAP---HLFDRPSGYGYPDNGERFA--FFS---WAAAEFAEGL-DPRPDIVHAHDWHTGLIPALLK 137 (466)
T ss_pred EEeEEcCCceEEEEeCH---HHcCCCCCCCCcChHHHHH--HHH---HHHHHHHHhc-CCCCceEEECCcHHHHHHHHHH
Confidence 00012368899888752 2344444555443322111 010 1111111111 1479999999999999988887
Q ss_pred hcC-----CCCEEEEecCCchhh---HHHHHHhhhcchHHHH-HHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhh
Q 001541 326 GAL-----NVPMLFTGHSLGRDK---LEQLLKQARLSRDEIN-ATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLY 396 (1057)
Q Consensus 326 ~~~-----~iP~V~t~H~l~~~~---~~~l~~~g~~~~~~~~-~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y 396 (1057)
..+ ++|+|+|.|++.... ...+...|. ...... ..+.+...+...+.++..||.|+++|+...++....+
T Consensus 138 ~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~~ 216 (466)
T PRK00654 138 EKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGL-PAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITTPE 216 (466)
T ss_pred HhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCC-ChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhcccc
Confidence 553 799999999985421 111110110 110000 0000111122345679999999999998877764322
Q ss_pred CCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCC-chHHHHHhhhCCC-C
Q 001541 397 DGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDP-PIWSEIMRFFTNP-R 474 (1057)
Q Consensus 397 ~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~ 474 (1057)
.++. +... ++....++.+||||||.+.|.|..... ....+....-.... .....+.++..++ +
T Consensus 217 ~~~g--l~~~-----------~~~~~~ki~vI~NGid~~~~~p~~~~~--~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~ 281 (466)
T PRK00654 217 FGYG--LEGL-----------LRARSGKLSGILNGIDYDIWNPETDPL--LAANYSADDLEGKAENKRALQERFGLPDDD 281 (466)
T ss_pred CCcC--hHHH-----------HHhcccCceEecCCCCccccCCccCcc--cccccChhhhhchHHHHHHHHHHhCCCCCC
Confidence 1110 0000 112234899999999999998753210 00000000000000 0112234444443 6
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEE-eCCCCC
Q 001541 475 KPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVA-YPKHHK 553 (1057)
Q Consensus 475 ~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~-f~g~v~ 553 (1057)
.++|+++||+.++||++.+++|+.++.+ +..++ +|+|+++. .+...+.+++.+++. ++. +.|+ +
T Consensus 282 ~~~i~~vGRl~~~KG~~~li~a~~~l~~--~~~~l-vivG~g~~---------~~~~~l~~l~~~~~~--~v~~~~g~-~ 346 (466)
T PRK00654 282 APLFAMVSRLTEQKGLDLVLEALPELLE--QGGQL-VLLGTGDP---------ELEEAFRALAARYPG--KVGVQIGY-D 346 (466)
T ss_pred CcEEEEeeccccccChHHHHHHHHHHHh--cCCEE-EEEecCcH---------HHHHHHHHHHHHCCC--cEEEEEeC-C
Confidence 7899999999999999999999999864 22233 47787652 245677788888763 455 4555 4
Q ss_pred CCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcC------CceEEeCCCCHHHHHHHH
Q 001541 554 QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVL------DNGLLVDPHDQQSVADAL 627 (1057)
Q Consensus 554 ~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~------~~Gllv~p~d~~~la~aI 627 (1057)
.+.++.+|+.| |++|+||.+||||++++|||+||+|+|+++.||+.|++.++ .+|++|+|.|+++++++|
T Consensus 347 ~~~~~~~~~~a----Dv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i 422 (466)
T PRK00654 347 EALAHRIYAGA----DMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRAL 422 (466)
T ss_pred HHHHHHHHhhC----CEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHH
Confidence 45577999999 99999999999999999999999999999999999999887 899999999999999999
Q ss_pred HHHHh---CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccC
Q 001541 628 LKLVA---DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKP 669 (1057)
Q Consensus 628 ~~ll~---d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~~ 669 (1057)
.++++ +++.+.++++++++ +.|||+.++++|+++|+++..
T Consensus 423 ~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 423 RRALELYRQPPLWRALQRQAMA--QDFSWDKSAEEYLELYRRLLG 465 (466)
T ss_pred HHHHHHhcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHHHHHhh
Confidence 99887 77778888887753 689999999999999997653
No 12
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=9.1e-39 Score=372.37 Aligned_cols=395 Identities=39% Similarity=0.618 Sum_probs=301.1
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcccc
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
||+|++.|+.+-+.+. .|+.||+++++.+|+++|+++| |+|+|+|.....+...
T Consensus 1 ~~~~~~~~~~~~~~~~----~~~~GG~~~~~~~l~~~L~~~g--~~V~v~~~~~~~~~~~-------------------- 54 (398)
T cd03800 1 RIALISLHGSPLAQPG----GADTGGQNVYVLELARALARLG--HEVDIFTRRIDDALPP-------------------- 54 (398)
T ss_pred CeEEEeccccccccCC----CCCCCceeehHHHHHHHHhccC--ceEEEEEecCCcccCC--------------------
Confidence 5888888876443222 3789999999999999999999 9999998764221110
Q ss_pred ccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHh
Q 001541 247 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSG 326 (1057)
Q Consensus 247 ~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~ 326 (1057)
.....+++.+++++..+. .+.++..+++++..|...+...+.. . ..+||+||+|++..+.++..+++
T Consensus 55 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~-----~~~~Div~~~~~~~~~~~~~~~~ 121 (398)
T cd03800 55 IVELAPGVRVVRVPAGPA-EYLPKEELWPYLDEFADDLLRFLRR-------E-----GGRPDLIHAHYWDSGLVALLLAR 121 (398)
T ss_pred ccccccceEEEecccccc-cCCChhhcchhHHHHHHHHHHHHHh-------c-----CCCccEEEEecCccchHHHHHHh
Confidence 012235889999887665 3455555666666655554444332 0 02699999999888888888889
Q ss_pred cCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHH
Q 001541 327 ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK 406 (1057)
Q Consensus 327 ~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~ 406 (1057)
..++|+|++.|++.......... ...+....+...|..+++.+|.|+++|+...+.+...+..
T Consensus 122 ~~~~~~i~~~h~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~-------- 184 (398)
T cd03800 122 RLGIPLVHTFHSLGAVKRRHLGA---------ADTYEPARRIEAEERLLRAADRVIASTPQEAEELYSLYGA-------- 184 (398)
T ss_pred hcCCceEEEeecccccCCccccc---------ccccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHHccc--------
Confidence 99999999999876543211100 0001122233356778999999999999887776554432
Q ss_pred HHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCC
Q 001541 407 LRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDP 486 (1057)
Q Consensus 407 l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~ 486 (1057)
...++.+||||+|.+.|.+..... ..+..+...+++++|+++||+.+
T Consensus 185 --------------~~~~~~vi~ng~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~i~~~gr~~~ 231 (398)
T cd03800 185 --------------YPRRIRVVPPGVDLERFTPYGRAE-------------------ARRARLLRDPDKPRILAVGRLDP 231 (398)
T ss_pred --------------cccccEEECCCCCccceecccchh-------------------hHHHhhccCCCCcEEEEEccccc
Confidence 112689999999998886532110 01222334567889999999999
Q ss_pred CCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhh
Q 001541 487 KKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAA 565 (1057)
Q Consensus 487 ~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa 565 (1057)
.||++.+++|+..+.... +++. +++|++..... ......+..+++.+++.++|.|+|+++.+++..+|+.|
T Consensus 232 ~k~~~~ll~a~~~l~~~~--~~~~l~i~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a- 303 (398)
T cd03800 232 RKGIDTLIRAYAELPELR--ERANLVIVGGPRDDIL-----AMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAA- 303 (398)
T ss_pred ccCHHHHHHHHHHHHHhC--CCeEEEEEECCCCcch-----hhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhC-
Confidence 999999999999997543 3445 47777654211 11234577888889999999999999999999999999
Q ss_pred cCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 001541 566 KTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGL 645 (1057)
Q Consensus 566 ~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~ 645 (1057)
|++|+||..|+||++++||||||+|||+++.||..|++.++.+|++++++|+++++++|.+++++++.+++++++++
T Consensus 304 ---di~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~a~ 380 (398)
T cd03800 304 ---DVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLSRAGL 380 (398)
T ss_pred ---CEEEecccccccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHh-hcCCHHHHHHHHH
Q 001541 646 KNI-HLFSWPEHCKTYL 661 (1057)
Q Consensus 646 ~~v-~~fsw~~~a~~~l 661 (1057)
+.+ ++|||+.++++|+
T Consensus 381 ~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 381 RRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHhCCHHHHHHHHh
Confidence 999 7999999999886
No 13
>PLN02316 synthase/transferase
Probab=100.00 E-value=8.3e-39 Score=395.52 Aligned_cols=425 Identities=15% Similarity=0.119 Sum_probs=283.9
Q ss_pred CCcceEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcc-cccCCCC
Q 001541 162 KGKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPT-EMLTPRN 240 (1057)
Q Consensus 162 ~~~~m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~-e~l~~~~ 240 (1057)
+..+|+|+|||.+.. |+ ..+||..-+|..|+++|+++| |+|+|||+.+............. ..+..+
T Consensus 584 ~~~pM~Il~VSsE~~----P~-----aKvGGLgDVV~sLp~ALa~~G--h~V~VitP~Y~~i~~~~~~~~~~~~~~~~~- 651 (1036)
T PLN02316 584 KEPPMHIVHIAVEMA----PI-----AKVGGLGDVVTSLSRAVQDLN--HNVDIILPKYDCLNLSHVKDLHYQRSYSWG- 651 (1036)
T ss_pred CCCCcEEEEEEcccC----CC-----CCcCcHHHHHHHHHHHHHHcC--CEEEEEecCCcccchhhcccceEEEEeccC-
Confidence 446799999998876 22 468999999999999999999 99999999864311100000000 000000
Q ss_pred CCccccccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHH
Q 001541 241 SDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDS 320 (1057)
Q Consensus 241 ~~~~~~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~ 320 (1057)
...+.-.....+|+.++.+.... .+..+..+..+.+.+. ++..+ .++..+.+.. ...+|||||+|+|.++.+
T Consensus 652 ~~~~~v~~~~~~GV~vyfl~~~~--~~F~r~~~Yg~~Dd~~-RF~~F----~~Aale~l~~-~~~~PDIIHaHDW~talv 723 (1036)
T PLN02316 652 GTEIKVWFGKVEGLSVYFLEPQN--GMFWAGCVYGCRNDGE-RFGFF----CHAALEFLLQ-SGFHPDIIHCHDWSSAPV 723 (1036)
T ss_pred CEEEEEEEEEECCcEEEEEeccc--cccCCCCCCCchhHHH-HHHHH----HHHHHHHHHh-cCCCCCEEEECCChHHHH
Confidence 00000011223577777776421 1122222222222111 11111 1111111111 124799999999998888
Q ss_pred HHHHHhc------CCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHh
Q 001541 321 AALLSGA------LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWR 394 (1057)
Q Consensus 321 a~~l~~~------~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~ 394 (1057)
+.+++.. .++|+|+|+|++.... ..+ +.++..||.|+|+|+...+++..
T Consensus 724 a~llk~~~~~~~~~~~p~V~TiHnl~~~~-------------------n~l------k~~l~~AD~ViTVS~tya~EI~~ 778 (1036)
T PLN02316 724 AWLFKDHYAHYGLSKARVVFTIHNLEFGA-------------------NHI------GKAMAYADKATTVSPTYSREVSG 778 (1036)
T ss_pred HHHHHHhhhhhccCCCCEEEEeCCcccch-------------------hHH------HHHHHHCCEEEeCCHHHHHHHHh
Confidence 8887653 4589999999874211 001 13578899999999998877654
Q ss_pred hhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCC-CCCCCCCCCCCCCCC-CchHHHHHhhhCC
Q 001541 395 LYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDM-DGETEGNEDNPASPD-PPIWSEIMRFFTN 472 (1057)
Q Consensus 395 ~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 472 (1057)
.+. +. ....++.+||||||++.|.|..+.. +..... ....... ........+++.+
T Consensus 779 ~~~-l~-------------------~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~--~~~~~gK~~~k~~Lr~~lGL~ 836 (1036)
T PLN02316 779 NSA-IA-------------------PHLYKFHGILNGIDPDIWDPYNDNFIPVPYTS--ENVVEGKRAAKEALQQRLGLK 836 (1036)
T ss_pred ccC-cc-------------------cccCCEEEEECCccccccCCcccccccccCCc--hhhhhhhhhhHHHHHHHhCCC
Confidence 221 00 1123899999999999988753211 000000 0000000 0111233445544
Q ss_pred -CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCC--CCCEEeC
Q 001541 473 -PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDL--YGQVAYP 549 (1057)
Q Consensus 473 -~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l--~~~V~f~ 549 (1057)
++.|+|+++|||.++||++.|++|+..+.. ....+ +|+|+|++. .+...+..++.++++ .++|.|.
T Consensus 837 ~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~--~~~ql-VIvG~Gpd~--------~~e~~l~~La~~Lg~~~~~rV~f~ 905 (1036)
T PLN02316 837 QADLPLVGIITRLTHQKGIHLIKHAIWRTLE--RNGQV-VLLGSAPDP--------RIQNDFVNLANQLHSSHHDRARLC 905 (1036)
T ss_pred cccCeEEEEEeccccccCHHHHHHHHHHHhh--cCcEE-EEEeCCCCH--------HHHHHHHHHHHHhCccCCCeEEEE
Confidence 367999999999999999999999999863 22333 578988752 345678888888865 4689998
Q ss_pred CCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcC-------------CceEEeC
Q 001541 550 KHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVL-------------DNGLLVD 616 (1057)
Q Consensus 550 g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~-------------~~Gllv~ 616 (1057)
+..+......+|+.| |+||+||.+||||++.+|||+||+|+|++++||++|+|.++ .+|++|+
T Consensus 906 g~~de~lah~iyaaA----DiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~ 981 (1036)
T PLN02316 906 LTYDEPLSHLIYAGA----DFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFD 981 (1036)
T ss_pred ecCCHHHHHHHHHhC----cEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeC
Confidence 775333334799999 99999999999999999999999999999999999999874 6899999
Q ss_pred CCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHccc
Q 001541 617 PHDQQSVADALLKLVAD-KQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGCK 668 (1057)
Q Consensus 617 p~d~~~la~aI~~ll~d-~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~~~~ 668 (1057)
|.|+++|+.+|.+++.+ ++....++..+++.+ +.|||+..+++|+++|+.+.
T Consensus 982 ~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 982 GADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred CCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 99999999999999986 455566788888877 68999999999999998764
No 14
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=4.2e-38 Score=370.38 Aligned_cols=398 Identities=16% Similarity=0.148 Sum_probs=287.6
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCC--ccCCcccccCCCCCCc
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDW--SYGEPTEMLTPRNSDD 243 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~--~y~~~~e~l~~~~~~~ 243 (1057)
|||++|+.+++ |+.||.+.++.+|+++|.++| |+|+|+|+....|.... .+....
T Consensus 1 mkIlii~~~~~-----------P~~~g~~~~~~~l~~~L~~~G--~~V~vit~~~~~~~~~~~~~~~~~~---------- 57 (412)
T PRK10307 1 MKILVYGINYA-----------PELTGIGKYTGEMAEWLAARG--HEVRVITAPPYYPQWRVGEGYSAWR---------- 57 (412)
T ss_pred CeEEEEecCCC-----------CCccchhhhHHHHHHHHHHCC--CeEEEEecCCCCCCCCCCccccccc----------
Confidence 79999997765 789999999999999999999 99999998643232110 111000
Q ss_pred cccccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC--chHHH
Q 001541 244 FMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYAD--AGDSA 321 (1057)
Q Consensus 244 ~~~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~--~~~~a 321 (1057)
......+|++++|+|....... . .+..... ...+.....+.+...+ . .+||+||+|.+. ....+
T Consensus 58 --~~~~~~~~i~v~r~~~~~~~~~----~---~~~~~~~-~~~~~~~~~~~~~~~~---~-~~~Div~~~~p~~~~~~~~ 123 (412)
T PRK10307 58 --YRRESEGGVTVWRCPLYVPKQP----S---GLKRLLH-LGSFALSSFFPLLAQR---R-WRPDRVIGVVPTLFCAPGA 123 (412)
T ss_pred --ceeeecCCeEEEEccccCCCCc----c---HHHHHHH-HHHHHHHHHHHHhhcc---C-CCCCEEEEeCCcHHHHHHH
Confidence 0111236899999986322100 0 0111110 1111111111211111 1 469999999763 34566
Q ss_pred HHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCCh
Q 001541 322 ALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP 401 (1057)
Q Consensus 322 ~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~ 401 (1057)
.++++..++|+|+++|+.+++... ..|..... ...++... .|+++++.||.|+++|+...+.+...
T Consensus 124 ~~~~~~~~~~~v~~~~d~~~~~~~---~~~~~~~~---~~~~~~~~--~~~~~~~~ad~ii~~S~~~~~~~~~~------ 189 (412)
T PRK10307 124 RLLARLSGARTWLHIQDYEVDAAF---GLGLLKGG---KVARLATA--FERSLLRRFDNVSTISRSMMNKAREK------ 189 (412)
T ss_pred HHHHHhhCCCEEEEeccCCHHHHH---HhCCccCc---HHHHHHHH--HHHHHHhhCCEEEecCHHHHHHHHHc------
Confidence 778888999999999998764421 12222111 11222222 37788999999999999877765332
Q ss_pred HHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEE
Q 001541 402 VLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILAL 481 (1057)
Q Consensus 402 ~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~v 481 (1057)
|....++.|||||+|.+.|.+.... .......++...+++++|+|+
T Consensus 190 -----------------~~~~~~i~vi~ngvd~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~i~~~ 235 (412)
T PRK10307 190 -----------------GVAAEKVIFFPNWSEVARFQPVADA-----------------DVDALRAQLGLPDGKKIVLYS 235 (412)
T ss_pred -----------------CCCcccEEEECCCcCHhhcCCCCcc-----------------chHHHHHHcCCCCCCEEEEEc
Confidence 1222389999999999888653210 011123344445667899999
Q ss_pred eCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHH
Q 001541 482 ARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEI 560 (1057)
Q Consensus 482 GRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~l 560 (1057)
||+.+.||++.|++|+..+.+ .+++.| |+|+|+. .+.+.+++.++++. +|.|+|+++.++++.+
T Consensus 236 G~l~~~kg~~~li~a~~~l~~---~~~~~l~ivG~g~~-----------~~~l~~~~~~~~l~-~v~f~G~~~~~~~~~~ 300 (412)
T PRK10307 236 GNIGEKQGLELVIDAARRLRD---RPDLIFVICGQGGG-----------KARLEKMAQCRGLP-NVHFLPLQPYDRLPAL 300 (412)
T ss_pred CccccccCHHHHHHHHHHhcc---CCCeEEEEECCChh-----------HHHHHHHHHHcCCC-ceEEeCCCCHHHHHHH
Confidence 999999999999999998742 345664 8898864 46677888889986 7999999999999999
Q ss_pred HHHhhcCCcEEEEcCCCCC----CCHHHHHHHHcCCcEEEcCCCC--chhhhhcCCceEEeCCCCHHHHHHHHHHHHhCH
Q 001541 561 YRLAAKTKGVFINPAFIEP----FGLTLIEAAAHGLPIVATKNGG--PVDIHRVLDNGLLVDPHDQQSVADALLKLVADK 634 (1057)
Q Consensus 561 y~~Aa~~~dv~v~ps~~Eg----fgl~~lEAmA~G~PVVat~~Gg--~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~ 634 (1057)
|+.| |++|+|+..|+ +|.+++||||||+|||+|+.|| ..+++. .+|++++|+|+++++++|.++++++
T Consensus 301 ~~~a----Di~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~~~~ 374 (412)
T PRK10307 301 LKMA----DCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALARQA 374 (412)
T ss_pred HHhc----CEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHHhCH
Confidence 9999 99999999888 5778899999999999999876 457876 6899999999999999999999999
Q ss_pred HHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHcccC
Q 001541 635 QLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGCKP 669 (1057)
Q Consensus 635 ~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~~~~~ 669 (1057)
+++++|++++++.+ ++|||+.++++|+++|.++..
T Consensus 375 ~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~ 410 (412)
T PRK10307 375 LLRPKLGTVAREYAERTLDKENVLRQFIADIRGLVA 410 (412)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc
Confidence 99999999999999 589999999999999998764
No 15
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=1e-41 Score=388.92 Aligned_cols=481 Identities=33% Similarity=0.428 Sum_probs=370.7
Q ss_pred hhhhhhhccCCCcCCCcccccccCCCC---CCCCCCCCChhhhhhhhhcccCCcc-eEEEEEecccccccCCcCCCCCCC
Q 001541 114 ATADMSEDLSEGEKGDIVSDVSAHGDS---TRSRLPRISSVDAMETWISQQKGKK-LYIVLISIHGLIRGENMELGRDSD 189 (1057)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-m~I~~is~h~~~~~~~~~~gr~~d 189 (1057)
+++|+++++++++|.+........... ...++.+...-+.+..|..+.+.-. +.+++. |++ ++| +||
T Consensus 1 ~~~~~~~~~~~~qk~~~~~m~~~~~~~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s-------~~~-~lg-~~d 71 (495)
T KOG0853|consen 1 MTNDSSSNISELQKVLWKAMIEKSLLVSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS-------GQD-VLG-LPD 71 (495)
T ss_pred CcchhhhHHHHhhhhhhhhhhhhhcccccccccchhheeeccccccCchHHHhHHHHHHHHh-------ccc-ccC-CCC
Confidence 468899999999998866655533332 2234445555456777777665422 333322 668 899 999
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCcccccc
Q 001541 190 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIA 269 (1057)
Q Consensus 190 ~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l~ 269 (1057)
+||+++|+++.+++|. .++++++...|++...+.....+..|.++. .+-+....+.+++++++|+++..++.
T Consensus 72 ~G~qV~~l~~h~~al~-~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~------~~~~~~~~~~~~~il~~~~~~~~k~~- 143 (495)
T KOG0853|consen 72 TGGQVVYLTSHEDALE-MPLLLRCFAETLDGTPPILVVGDWLPRAMG------QFLEQVAGCAYLRILRIPFGILFKWA- 143 (495)
T ss_pred CCceEEEEehhhhhhc-chHHHHHHHHHhcCCCceEEEEeecCcccc------hhhhhhhccceeEEEEeccchhhhhh-
Confidence 9999999999999998 777777777777654455545555555442 12244556789999999998876665
Q ss_pred cccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHH
Q 001541 270 KELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLK 349 (1057)
Q Consensus 270 k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~ 349 (1057)
+.+||++..|+... ..|.+++. . ||++|.++++.+..+.++++++|++.+++.|.++..+.++...
T Consensus 144 -~~~d~~i~d~~~~~--------~~l~~~~~----~-p~~~~~i~~~~h~~~~lla~r~g~~~~l~~~~l~~~e~e~~~~ 209 (495)
T KOG0853|consen 144 -EKVDPIIEDFVSAC--------VPLLKQLS----G-PDVIIKIYFYCHFPDSLLAKRLGVLKVLYRHALDKIEEETTGL 209 (495)
T ss_pred -hhhceeecchHHHH--------HHHHHHhc----C-CcccceeEEeccchHHHhccccCccceeehhhhhhhhhhhhhc
Confidence 77899999888433 22223222 2 9999999999999999999999999999999999988887766
Q ss_pred hhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeC
Q 001541 350 QARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIP 429 (1057)
Q Consensus 350 ~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIp 429 (1057)
+++. +...|++.+++..+...+..+| ++++.++++..|..|+.++..++..++.|.++||.+.+++++++..|+
T Consensus 210 ~~~~----~~ns~~~~~~f~~~~~~L~~~d--~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~~d~~~~siN~~~ 283 (495)
T KOG0853|consen 210 AWKI----LVNSYFTKRQFKATFVSLSNSD--ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSGIDRFFPSINRFE 283 (495)
T ss_pred cceE----ecchhhhhhhhhhhhhhcCCCC--cceeeccccchhccccccccchhcccccceeeeecccceEeeeeeecC
Confidence 5543 6778899999999999999999 888889999999999999888888888888888888888888888888
Q ss_pred CCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhccccc---CC
Q 001541 430 PGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLR---EL 506 (1057)
Q Consensus 430 nGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~---~~ 506 (1057)
+|.|...+.+ ||..+...- +.
T Consensus 284 pgkd~~l~l~--------------------------------------------------------a~~~~~~~i~~~~~ 307 (495)
T KOG0853|consen 284 PGKDQDLALP--------------------------------------------------------AFTLLHDSIPEPSI 307 (495)
T ss_pred CCCCceeehh--------------------------------------------------------hHHhhhcccCCCCC
Confidence 8777665432 333333222 23
Q ss_pred CcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCC-CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHH
Q 001541 507 ANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY-GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTL 584 (1057)
Q Consensus 507 ~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~-~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~ 584 (1057)
+..++ ++|+. .+++..+++.+++.++..+++++++. ..|.|+.++++.+. |+.++.++.+|+.|+. |.||+|.
T Consensus 308 ~~~hl~~~g~~-G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~---yrl~adt~~v~~qPa~-E~FGiv~ 382 (495)
T KOG0853|consen 308 SSEHLVVAGSR-GYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTTRVAK---YRLAADTKGVLYQPAN-EHFGIVP 382 (495)
T ss_pred CceEEEEecCC-CccccchhhHHHHHHHHHHHHHhCccCceEEEecCCchHHH---HHHHHhcceEEecCCC-CCcccee
Confidence 45555 44432 26788889999999999999999996 55777788765555 7777788899999998 9999999
Q ss_pred HHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHH---HHHHHHHHHHhCHHHHHHHHHHHHHHhh-cCCHHHHHHHH
Q 001541 585 IEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQ---SVADALLKLVADKQLWARCRQNGLKNIH-LFSWPEHCKTY 660 (1057)
Q Consensus 585 lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~---~la~aI~~ll~d~~~~~~~~~~~~~~v~-~fsw~~~a~~~ 660 (1057)
+||||||+|||||++||+.|+|.++.+|++++| +.+ .+|++|.++..||+.|.+|+++|+++++ .|+|..+.+++
T Consensus 383 IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~~~~a~~~~kl~~~p~l~~~~~~~G~~rV~e~fs~~~~~~ri 461 (495)
T KOG0853|consen 383 IEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQEAVAELADALLKLRRDPELWARMGKNGLKRVKEMFSWQHYSERI 461 (495)
T ss_pred HHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 999999999999999999999999999999999 766 6999999999999999999999999995 69996655555
Q ss_pred HHHHHcccCCCCCCCCCCCCCCCCCCCCCCCccchhhhhcccccccc
Q 001541 661 LSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSL 707 (1057)
Q Consensus 661 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~l~~~~ 707 (1057)
.+.+. +.++|+.. +..++++++.++++++.+++
T Consensus 462 ~~~~~----~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 494 (495)
T KOG0853|consen 462 ASVLG----KYLQWEKV----------SSLDSLEDRRYISLFYALSF 494 (495)
T ss_pred HHHhH----hcCCcccc----------cccccccccccHHHHHHhhc
Confidence 55554 55566543 23688899999997766654
No 16
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=8e-38 Score=373.51 Aligned_cols=377 Identities=19% Similarity=0.218 Sum_probs=273.4
Q ss_pred CcceEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCC
Q 001541 163 GKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSD 242 (1057)
Q Consensus 163 ~~~m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~ 242 (1057)
.++|||+++. +.. + .+..||++.++.+|+++|.++| |+|+|+|.....+.
T Consensus 56 ~~~mrI~~~~-~~~----~-----~~~~gG~~~~~~~l~~~L~~~G--~eV~vlt~~~~~~~------------------ 105 (465)
T PLN02871 56 SRPRRIALFV-EPS----P-----FSYVSGYKNRFQNFIRYLREMG--DEVLVVTTDEGVPQ------------------ 105 (465)
T ss_pred CCCceEEEEE-CCc----C-----CcccccHHHHHHHHHHHHHHCC--CeEEEEecCCCCCc------------------
Confidence 6789999997 322 0 2568999999999999999999 99999997532110
Q ss_pred ccccccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC-chHHH
Q 001541 243 DFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYAD-AGDSA 321 (1057)
Q Consensus 243 ~~~~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~-~~~~a 321 (1057)
+..++.++++...+.. .... ..+.+ .+...+. +.+.+ .+|||||+|.+. ....+
T Consensus 106 -------~~~g~~v~~~~~~~~~-~~~~-~~~~~--~~~~~l~-------~~i~~-------~kpDiIh~~~~~~~~~~~ 160 (465)
T PLN02871 106 -------EFHGAKVIGSWSFPCP-FYQK-VPLSL--ALSPRII-------SEVAR-------FKPDLIHASSPGIMVFGA 160 (465)
T ss_pred -------cccCceeeccCCcCCc-cCCC-ceeec--cCCHHHH-------HHHHh-------CCCCEEEECCCchhHHHH
Confidence 0125555544322210 0111 00001 0111121 22222 579999999863 34445
Q ss_pred HHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCCh
Q 001541 322 ALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP 401 (1057)
Q Consensus 322 ~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~ 401 (1057)
..+++..++|+|++.|+......... . ....++... ..+++.++.+|.|+++|+...+.+...+.
T Consensus 161 ~~~ak~~~ip~V~~~h~~~~~~~~~~------~---~~~~~~~~~--~~~r~~~~~ad~ii~~S~~~~~~l~~~~~---- 225 (465)
T PLN02871 161 LFYAKLLCVPLVMSYHTHVPVYIPRY------T---FSWLVKPMW--DIIRFLHRAADLTLVTSPALGKELEAAGV---- 225 (465)
T ss_pred HHHHHHhCCCEEEEEecCchhhhhcc------c---chhhHHHHH--HHHHHHHhhCCEEEECCHHHHHHHHHcCC----
Confidence 56677889999999998754332111 0 001111111 12456788999999999987776544321
Q ss_pred HHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhh-CCCCCcEEEE
Q 001541 402 VLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFF-TNPRKPVILA 480 (1057)
Q Consensus 402 ~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Il~ 480 (1057)
.+..++.+||||+|.+.|.|.... .....++. ..+++++|+|
T Consensus 226 ------------------~~~~kv~vi~nGvd~~~f~p~~~~-------------------~~~~~~~~~~~~~~~~i~~ 268 (465)
T PLN02871 226 ------------------TAANRIRVWNKGVDSESFHPRFRS-------------------EEMRARLSGGEPEKPLIVY 268 (465)
T ss_pred ------------------CCcCeEEEeCCccCccccCCcccc-------------------HHHHHHhcCCCCCCeEEEE
Confidence 112389999999999988753211 01111221 2356789999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHH
Q 001541 481 LARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPE 559 (1057)
Q Consensus 481 vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ 559 (1057)
+||+.+.||++.+++++..+. ++. +|+|+++. ...+.+++.. .+|.|+|+++.++++.
T Consensus 269 vGrl~~~K~~~~li~a~~~~~------~~~l~ivG~G~~-----------~~~l~~~~~~----~~V~f~G~v~~~ev~~ 327 (465)
T PLN02871 269 VGRLGAEKNLDFLKRVMERLP------GARLAFVGDGPY-----------REELEKMFAG----TPTVFTGMLQGDELSQ 327 (465)
T ss_pred eCCCchhhhHHHHHHHHHhCC------CcEEEEEeCChH-----------HHHHHHHhcc----CCeEEeccCCHHHHHH
Confidence 999999999999999998762 444 48898764 3445555543 3699999999999999
Q ss_pred HHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhc---CCceEEeCCCCHHHHHHHHHHHHhCHHH
Q 001541 560 IYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV---LDNGLLVDPHDQQSVADALLKLVADKQL 636 (1057)
Q Consensus 560 ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~---~~~Gllv~p~d~~~la~aI~~ll~d~~~ 636 (1057)
+|+.| |+||+||..|+||++++||||||+|||+++.||..|++.+ +.+|++++|+|+++++++|.+++++++.
T Consensus 328 ~~~~a----Dv~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~~~~ 403 (465)
T PLN02871 328 AYASG----DVFVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLADPEL 403 (465)
T ss_pred HHHHC----CEEEECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhCHHH
Confidence 99999 9999999999999999999999999999999999999998 8999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHH-HHHcccCCC
Q 001541 637 WARCRQNGLKNIHLFSWPEHCKTYLS-RIAGCKPRH 671 (1057)
Q Consensus 637 ~~~~~~~~~~~v~~fsw~~~a~~~l~-~~~~~~~~~ 671 (1057)
++++++++++.+++|||+.+++++++ .|.++....
T Consensus 404 ~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~~ 439 (465)
T PLN02871 404 RERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWFW 439 (465)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998 688876553
No 17
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=6.6e-38 Score=367.11 Aligned_cols=367 Identities=20% Similarity=0.216 Sum_probs=272.4
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcccc
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
||++|+.... |..||+++++.+|+++|+++| |+|+|+|+....+. + .
T Consensus 1 kI~~v~~~~~-----------p~~GG~e~~~~~la~~L~~~G--~~V~v~~~~~~~~~-----~--~------------- 47 (398)
T cd03796 1 RICMVSDFFY-----------PNLGGVETHIYQLSQCLIKRG--HKVVVITHAYGNRV-----G--I------------- 47 (398)
T ss_pred CeeEEeeccc-----------cccccHHHHHHHHHHHHHHcC--CeeEEEeccCCcCC-----C--c-------------
Confidence 6899986565 789999999999999999999 99999997531110 0 0
Q ss_pred ccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCch--HHHHHH
Q 001541 247 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAG--DSAALL 324 (1057)
Q Consensus 247 ~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~--~~a~~l 324 (1057)
.....++.++++|..+. .+......+.. .+..+.+.+.+ .+|||||+|+.... ..+.++
T Consensus 48 -~~~~~~i~v~~~p~~~~----~~~~~~~~~~~-------~~~~l~~~~~~-------~~~DiIh~~~~~~~~~~~~~~~ 108 (398)
T cd03796 48 -RYLTNGLKVYYLPFVVF----YNQSTLPTFFG-------TFPLLRNILIR-------ERITIVHGHQAFSALAHEALLH 108 (398)
T ss_pred -ccccCceeEEEecceec----cCCccccchhh-------hHHHHHHHHHh-------cCCCEEEECCCCchHHHHHHHH
Confidence 01135788888886332 11111111111 11111122222 57999999986433 345667
Q ss_pred HhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHH
Q 001541 325 SGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 404 (1057)
Q Consensus 325 ~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~ 404 (1057)
++..++|+|+|.|+....... .. ....+ .+++.++.+|.++++|+...+...... .
T Consensus 109 ~~~~~~~~v~t~h~~~~~~~~--------~~-------~~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~-~------ 164 (398)
T cd03796 109 ARTMGLKTVFTDHSLFGFADA--------SS-------IHTNK--LLRFSLADVDHVICVSHTSKENTVLRA-S------ 164 (398)
T ss_pred hhhcCCcEEEEecccccccch--------hh-------HHhhH--HHHHhhccCCEEEEecHhHhhHHHHHh-C------
Confidence 788899999999986431100 00 00111 134568899999999988665432111 1
Q ss_pred HHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCC
Q 001541 405 RKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARP 484 (1057)
Q Consensus 405 ~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl 484 (1057)
.+..++.+||||+|.+.|.+.... ..+++++|+++||+
T Consensus 165 ---------------~~~~k~~vi~ngvd~~~f~~~~~~---------------------------~~~~~~~i~~~grl 202 (398)
T cd03796 165 ---------------LDPERVSVIPNAVDSSDFTPDPSK---------------------------RDNDKITIVVISRL 202 (398)
T ss_pred ---------------CChhhEEEEcCccCHHHcCCCccc---------------------------CCCCceEEEEEecc
Confidence 122389999999999888653211 13567899999999
Q ss_pred CCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHH
Q 001541 485 DPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRL 563 (1057)
Q Consensus 485 ~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~ 563 (1057)
.+.||++.+++|+..+.+. .+++.+ |+|+++. ...+.++++++++.++|.|+|+++.+++..+|+.
T Consensus 203 ~~~Kg~~~li~a~~~l~~~--~~~~~l~i~G~g~~-----------~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ 269 (398)
T cd03796 203 VYRKGIDLLVGIIPEICKK--HPNVRFIIGGDGPK-----------RILLEEMREKYNLQDRVELLGAVPHERVRDVLVQ 269 (398)
T ss_pred chhcCHHHHHHHHHHHHhh--CCCEEEEEEeCCch-----------HHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHh
Confidence 9999999999999988643 346664 7788764 4567888999999999999999999999999999
Q ss_pred hhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 001541 564 AAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQN 643 (1057)
Q Consensus 564 Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~ 643 (1057)
| |++|+||..|+||++++||||||+|||+|+.||..|++.++ .+++++ .|.++++++|.++++++.+...++++
T Consensus 270 a----d~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~-~~~~~~-~~~~~l~~~l~~~l~~~~~~~~~~~~ 343 (398)
T cd03796 270 G----HIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPD-MILLAE-PDVESIVRKLEEAISILRTGKHDPWS 343 (398)
T ss_pred C----CEEEeCChhhccCHHHHHHHHcCCCEEECCCCCchhheeCC-ceeecC-CCHHHHHHHHHHHHhChhhhhhHHHH
Confidence 9 99999999999999999999999999999999999999764 455554 49999999999999988777778888
Q ss_pred HHHHh-hcCCHHHHHHHHHHHHHcccCC
Q 001541 644 GLKNI-HLFSWPEHCKTYLSRIAGCKPR 670 (1057)
Q Consensus 644 ~~~~v-~~fsw~~~a~~~l~~~~~~~~~ 670 (1057)
+++.+ ++|||+..+++|+++|+++...
T Consensus 344 ~~~~~~~~fs~~~~~~~~~~~y~~l~~~ 371 (398)
T cd03796 344 FHNRVKKMYSWEDVAKRTEKVYDRILQT 371 (398)
T ss_pred HHHHHHhhCCHHHHHHHHHHHHHHHhcC
Confidence 88888 6999999999999999988653
No 18
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=4.2e-38 Score=376.83 Aligned_cols=446 Identities=18% Similarity=0.190 Sum_probs=288.6
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccC-Ccccc--cC-CCCC
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYG-EPTEM--LT-PRNS 241 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~-~~~e~--l~-~~~~ 241 (1057)
|||++||.... | ...+||...+|..|+++|+++| |+|+|+|+.+..-....... +.... +. .+..
T Consensus 1 m~i~~vs~E~~----P-----~~k~GGl~~~v~~L~~aL~~~G--~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (473)
T TIGR02095 1 MRVLFVAAEMA----P-----FAKTGGLADVVGALPKALAALG--HDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRT 69 (473)
T ss_pred CeEEEEEeccc----c-----ccCcCcHHHHHHHHHHHHHHcC--CeEEEEecCCcChhhhhccCeEEEEEEEEeecCce
Confidence 79999997754 1 1459999999999999999999 99999998764211110000 00000 00 0000
Q ss_pred CccccccCCCCCeEEEEccCCCccccccc-ccCCC--ChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCch
Q 001541 242 DDFMDDMGESSGAYIIRIPFGPKDKYIAK-ELLWP--HIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAG 318 (1057)
Q Consensus 242 ~~~~~~~~~~~gv~i~rip~~p~~~~l~k-~~l~~--~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~ 318 (1057)
..+.--....+|+.++++.... +..+ ..+.. +...+.. +.. +.+...+.+.. ...+|||||+|.|.++
T Consensus 70 ~~~~~~~~~~~~v~~~~i~~~~---~~~r~~~~y~~~~~d~~~r-~~~----f~~a~~~~~~~-~~~~~DiiH~hdw~~~ 140 (473)
T TIGR02095 70 LYVKVFEGVVEGVPVYFIDNPS---LFDRPGGIYGDDYPDNAER-FAF----FSRAAAELLSG-LGWQPDVVHAHDWHTA 140 (473)
T ss_pred eEEEEEEEEECCceEEEEECHH---HcCCCCCCCCCCCCCHHHH-HHH----HHHHHHHHHHh-cCCCCCEEEECCcHHH
Confidence 0000001233678888886532 1111 11222 2222111 111 11111221111 1257999999999999
Q ss_pred HHHHHHHhcCC---CCEEEEecCCchhh-H-HHHHHhhhcchHHHH-HHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHH
Q 001541 319 DSAALLSGALN---VPMLFTGHSLGRDK-L-EQLLKQARLSRDEIN-ATYKIMRRIEAEELSLDASEIVITSTRQEIEEQ 392 (1057)
Q Consensus 319 ~~a~~l~~~~~---iP~V~t~H~l~~~~-~-~~l~~~g~~~~~~~~-~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~ 392 (1057)
.++.+++...+ +|+|+|+|++.... + ...+....+....+. ..+....++..++.++..||.|+++|+...++.
T Consensus 141 ~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei 220 (473)
T TIGR02095 141 LVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAREI 220 (473)
T ss_pred HHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHHHHh
Confidence 99998887776 99999999985321 1 001110001111000 001111133446678999999999999887776
Q ss_pred HhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCC-CchHHHHHhhhC
Q 001541 393 WRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPD-PPIWSEIMRFFT 471 (1057)
Q Consensus 393 ~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 471 (1057)
.....+.. +...|+ ....++.+||||||.+.|.|.....-. ..+........ ......+.++..
T Consensus 221 ~~~~~~~~--l~~~l~-----------~~~~ki~~I~NGid~~~~~p~~~~~~~--~~~~~~~~~~k~~~k~~l~~~~gl 285 (473)
T TIGR02095 221 LTPEFGYG--LDGVLK-----------ARSGKLRGILNGIDTEVWNPATDPYLK--ANYSADDLAGKAENKEALQEELGL 285 (473)
T ss_pred cCCcCCcc--chhHHH-----------hcCCCeEEEeCCCCccccCCCCCcccc--cCcCccchhhhhhhHHHHHHHcCC
Confidence 44211110 011111 122489999999999999875321100 00000000000 011122334444
Q ss_pred CC--CCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEe
Q 001541 472 NP--RKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY 548 (1057)
Q Consensus 472 ~~--~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f 548 (1057)
+. +.++|+++||+.+.||++.+++|+.++.+. ++. +|+|+++. .+...+.+++.+++ .++.|
T Consensus 286 ~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~----~~~lvi~G~g~~---------~~~~~l~~~~~~~~--~~v~~ 350 (473)
T TIGR02095 286 PVDDDVPLFGVISRLTQQKGVDLLLAALPELLEL----GGQLVVLGTGDP---------ELEEALRELAERYP--GNVRV 350 (473)
T ss_pred CccCCCCEEEEEecCccccChHHHHHHHHHHHHc----CcEEEEECCCCH---------HHHHHHHHHHHHCC--CcEEE
Confidence 43 789999999999999999999999998642 244 47788752 23456777776664 56888
Q ss_pred CCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcC------CceEEeCCCCHHH
Q 001541 549 PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVL------DNGLLVDPHDQQS 622 (1057)
Q Consensus 549 ~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~------~~Gllv~p~d~~~ 622 (1057)
.+.++.+++..+|+.| |++|+||..||||++++|||+||+|+|+++.||+.|++.++ .+|++++|.|+++
T Consensus 351 ~~~~~~~~~~~~~~~a----Dv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~ 426 (473)
T TIGR02095 351 IIGYDEALAHLIYAGA----DFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGA 426 (473)
T ss_pred EEcCCHHHHHHHHHhC----CEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHH
Confidence 8877778889999999 99999999999999999999999999999999999999988 8999999999999
Q ss_pred HHHHHHHHHh----CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcc
Q 001541 623 VADALLKLVA----DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGC 667 (1057)
Q Consensus 623 la~aI~~ll~----d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~ 667 (1057)
++++|.+++. +++.++++++++++ +.|||+.++++|+++|+++
T Consensus 427 la~~i~~~l~~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 427 LLAALSRALRLYRQDPSLWEALQKNAMS--QDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhc--cCCCcHHHHHHHHHHHHhC
Confidence 9999999988 99999999988753 6899999999999999864
No 19
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=3.1e-37 Score=359.37 Aligned_cols=377 Identities=22% Similarity=0.291 Sum_probs=274.3
Q ss_pred eEEEEEecccccccCCcCCCCCCC-CCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcc
Q 001541 166 LYIVLISIHGLIRGENMELGRDSD-TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDF 244 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d-~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~ 244 (1057)
|||++|+.... |+ .||.++++.+|+++|.+. ++|+|+|.... .
T Consensus 1 mkI~~i~~~~~-----------p~~~GG~~~~v~~l~~~l~~~---~~v~v~~~~~~--~-------------------- 44 (388)
T TIGR02149 1 MKVTVLTREYP-----------PNVYGGAGVHVEELTRELARL---MDVDVRCFGDQ--R-------------------- 44 (388)
T ss_pred CeeEEEecccC-----------ccccccHhHHHHHHHHHHHHh---cCeeEEcCCCc--h--------------------
Confidence 79999985543 55 499999999999999886 56777765321 0
Q ss_pred ccccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHH
Q 001541 245 MDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALL 324 (1057)
Q Consensus 245 ~~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l 324 (1057)
....++.+++++.... +. .....+..+.. .... .. ...+|||||+|.+.++..+.++
T Consensus 45 ----~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~---~~~~---------~~--~~~~~divh~~~~~~~~~~~~~ 101 (388)
T TIGR02149 45 ----FDSEGLTVKGYRPWSE---LK--EANKALGTFSV---DLAM---------AN--DPVDADVVHSHTWYTFLAGHLA 101 (388)
T ss_pred ----hcCCCeEEEEecChhh---cc--chhhhhhhhhH---HHHH---------hh--CCCCCCeEeecchhhhhHHHHH
Confidence 0124677777653211 00 00011111100 0000 00 1136999999998777777777
Q ss_pred HhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHH
Q 001541 325 SGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 404 (1057)
Q Consensus 325 ~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~ 404 (1057)
++..++|+|+|.|++.+..... .......+.+..+ .++.+++.+|.|+++|+...+.+...+.+..+
T Consensus 102 ~~~~~~p~v~~~h~~~~~~~~~--------~~~~~~~~~~~~~--~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~--- 168 (388)
T TIGR02149 102 KKLYDKPLVVTAHSLEPLRPWK--------EEQLGGGYKLSSW--AEKTAIEAADRVIAVSGGMREDILKYYPDLDP--- 168 (388)
T ss_pred HHhcCCCEEEEeeccccccccc--------ccccccchhHHHH--HHHHHHhhCCEEEEccHHHHHHHHHHcCCCCc---
Confidence 7778999999999975422100 0000111222333 36678999999999999877766554433222
Q ss_pred HHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCC
Q 001541 405 RKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARP 484 (1057)
Q Consensus 405 ~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl 484 (1057)
.++.+||||+|...|.+.. ....+.++..++++++|+++||+
T Consensus 169 ------------------~~i~vi~ng~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~i~~~Grl 210 (388)
T TIGR02149 169 ------------------EKVHVIYNGIDTKEYKPDD--------------------GNVVLDRYGIDRSRPYILFVGRI 210 (388)
T ss_pred ------------------ceEEEecCCCChhhcCCCc--------------------hHHHHHHhCCCCCceEEEEEccc
Confidence 3899999999998776421 11223444555678899999999
Q ss_pred CCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCC-CCCEEe-CCCCCCCcHHHHHH
Q 001541 485 DPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDL-YGQVAY-PKHHKQSDVPEIYR 562 (1057)
Q Consensus 485 ~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l-~~~V~f-~g~v~~~dl~~ly~ 562 (1057)
.+.||++.+++|+.++. +...+ +++|++++. .++...+.+++..++. ..+|.| .+.++.+++..+|+
T Consensus 211 ~~~Kg~~~li~a~~~l~---~~~~l-~i~g~g~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 279 (388)
T TIGR02149 211 TRQKGVPHLLDAVHYIP---KDVQV-VLCAGAPDT-------PEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLS 279 (388)
T ss_pred ccccCHHHHHHHHHHHh---hcCcE-EEEeCCCCc-------HHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHH
Confidence 99999999999999884 22333 355665542 2245667777777765 234554 67899999999999
Q ss_pred HhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCH------HHHHHHHHHHHhCHHH
Q 001541 563 LAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ------QSVADALLKLVADKQL 636 (1057)
Q Consensus 563 ~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~------~~la~aI~~ll~d~~~ 636 (1057)
.| |++|+||..|+||++++||||||+|||+|+.||..|++.++.+|+++++.|. ++++++|.+++++++.
T Consensus 280 ~a----Dv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~ 355 (388)
T TIGR02149 280 NA----EVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLADPEL 355 (388)
T ss_pred hC----CEEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhCHHH
Confidence 99 9999999999999999999999999999999999999999999999999998 9999999999999999
Q ss_pred HHHHHHHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 001541 637 WARCRQNGLKNI-HLFSWPEHCKTYLSRIAGC 667 (1057)
Q Consensus 637 ~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~~~ 667 (1057)
++++++++++.+ ++|||+.++++|.++|+++
T Consensus 356 ~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 356 AKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 999999999998 6899999999999999875
No 20
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=1.1e-36 Score=362.85 Aligned_cols=445 Identities=18% Similarity=0.167 Sum_probs=281.8
Q ss_pred ceEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCc--ccccCCCCCC
Q 001541 165 KLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEP--TEMLTPRNSD 242 (1057)
Q Consensus 165 ~m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~--~e~l~~~~~~ 242 (1057)
+|||++|+.... |+ ..+||..-++-.|.++|+++| |+|.|+++.+..- ....... ...+...-..
T Consensus 3 ~~~il~v~~E~~----p~-----~k~ggl~dv~~~lp~~l~~~g--~~v~v~~P~y~~~--~~~~~~~~~~~~~~~~~~~ 69 (485)
T PRK14099 3 PLRVLSVASEIF----PL-----IKTGGLADVAGALPAALKAHG--VEVRTLVPGYPAV--LAGIEDAEQVHSFPDLFGG 69 (485)
T ss_pred CcEEEEEEeccc----cc-----cCCCcHHHHHHHHHHHHHHCC--CcEEEEeCCCcch--hhhhcCceEEEEEeeeCCc
Confidence 599999997664 23 789999999999999999999 9999999876321 1000000 0001000000
Q ss_pred ccccccCCCCCeEEEEccCCCccccccccc-CC------CChhHHHHHHHHHHHHHHHHHHhhhcCC-CCCcceEEEEcC
Q 001541 243 DFMDDMGESSGAYIIRIPFGPKDKYIAKEL-LW------PHIPEFVDGALNHIIRMSNVLGEQIGGG-KPVWPVAIHGHY 314 (1057)
Q Consensus 243 ~~~~~~~~~~gv~i~rip~~p~~~~l~k~~-l~------~~l~~f~~~~l~~~~~~~k~L~~~~~~~-~~~~pDvIh~h~ 314 (1057)
.+.--....+|+.++-+... .+..+.. +. +|.+ ...++.. ..++..+..... ...+|||||+|.
T Consensus 70 ~~~~~~~~~~~v~~~~~~~~---~~f~r~~~~y~~~~~~~~~d----~~~rf~~-f~~a~~~~~~~~~~~~~pDIiH~Hd 141 (485)
T PRK14099 70 PARLLAARAGGLDLFVLDAP---HLYDRPGNPYVGPDGKDWPD----NAQRFAA-LARAAAAIGQGLVPGFVPDIVHAHD 141 (485)
T ss_pred eEEEEEEEeCCceEEEEeCh---HhhCCCCCCCCCccCCCCCc----HHHHHHH-HHHHHHHHHhhhccCCCCCEEEECC
Confidence 00000111245655554321 1122211 11 2222 2222211 111111212111 125799999999
Q ss_pred CCchHHHHHHHh--cCCCCEEEEecCCchhh-H--HHHHHhhhcchHHHH-HHHHHHHHHHHHHHHhhcCCEEEecCHHH
Q 001541 315 ADAGDSAALLSG--ALNVPMLFTGHSLGRDK-L--EQLLKQARLSRDEIN-ATYKIMRRIEAEELSLDASEIVITSTRQE 388 (1057)
Q Consensus 315 ~~~~~~a~~l~~--~~~iP~V~t~H~l~~~~-~--~~l~~~g~~~~~~~~-~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~ 388 (1057)
|.++.++.++.. ..++|+|+|+|++.... + ..+...|. ....+. ....+...+...+.++..||.|+|+|+..
T Consensus 142 w~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~ 220 (485)
T PRK14099 142 WQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGL-PPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTY 220 (485)
T ss_pred cHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCC-ChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhH
Confidence 999888877753 34789999999985422 1 11111111 111110 00011112223566899999999999988
Q ss_pred HHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCc-hHHHHH
Q 001541 389 IEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPP-IWSEIM 467 (1057)
Q Consensus 389 ~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 467 (1057)
.+++...+.+.. +...|+ ....++.+||||||.+.|.|....... ..+....-..... ......
T Consensus 221 a~ei~~~~~g~g--l~~~l~-----------~~~~ki~vI~NGID~~~f~p~~~~~~~--~~~~~~~~~~k~~~k~~l~~ 285 (485)
T PRK14099 221 ALEIQGPEAGMG--LDGLLR-----------QRADRLSGILNGIDTAVWNPATDELIA--ATYDVETLAARAANKAALQA 285 (485)
T ss_pred HHHHhcccCCcC--hHHHHH-----------hhCCCeEEEecCCchhhccccccchhh--hcCChhHHHhHHHhHHHHHH
Confidence 877654322110 001111 123489999999999999875421100 0000000000000 112233
Q ss_pred hhhCC--CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHcCCCC
Q 001541 468 RFFTN--PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYG 544 (1057)
Q Consensus 468 ~~~~~--~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~ 544 (1057)
++..+ ++.++|+++||+.++||++.+++|+..+.+ . ++. +|+|+|+. ++...+.+++.+++ +
T Consensus 286 ~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~--~--~~~lvivG~G~~---------~~~~~l~~l~~~~~--~ 350 (485)
T PRK14099 286 RFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLG--E--GAQLALLGSGDA---------ELEARFRAAAQAYP--G 350 (485)
T ss_pred HcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHh--c--CcEEEEEecCCH---------HHHHHHHHHHHHCC--C
Confidence 44443 357899999999999999999999998863 2 334 57788752 23456777777764 3
Q ss_pred CE-EeCCCCCCCcHHHHHH-HhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcC---------CceE
Q 001541 545 QV-AYPKHHKQSDVPEIYR-LAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVL---------DNGL 613 (1057)
Q Consensus 545 ~V-~f~g~v~~~dl~~ly~-~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~---------~~Gl 613 (1057)
++ .|.|+ .++++.+|. .| |+||+||.+||||++.+||||||+|+|++++||+.|+|.++ .+|+
T Consensus 351 ~v~~~~G~--~~~l~~~~~a~a----Difv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~ 424 (485)
T PRK14099 351 QIGVVIGY--DEALAHLIQAGA----DALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGV 424 (485)
T ss_pred CEEEEeCC--CHHHHHHHHhcC----CEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceE
Confidence 44 78998 689999885 57 99999999999999999999999988889999999998765 5899
Q ss_pred EeCCCCHHHHHHHHHH---HHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccC
Q 001541 614 LVDPHDQQSVADALLK---LVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKP 669 (1057)
Q Consensus 614 lv~p~d~~~la~aI~~---ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~~ 669 (1057)
+|+|.|+++|+++|.+ ++++++.|+++++++++ +.|||+..+++|+++|+++..
T Consensus 425 l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~~--~~fSw~~~a~~y~~lY~~l~~ 481 (485)
T PRK14099 425 QFSPVTADALAAALRKTAALFADPVAWRRLQRNGMT--TDVSWRNPAQHYAALYRSLVA 481 (485)
T ss_pred EeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhhh--hcCChHHHHHHHHHHHHHHHh
Confidence 9999999999999997 67799999999999863 689999999999999998764
No 21
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=3.5e-36 Score=358.96 Aligned_cols=451 Identities=14% Similarity=0.154 Sum_probs=285.5
Q ss_pred ceEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCC-CccCCc--ccccCC--C
Q 001541 165 KLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVD-WSYGEP--TEMLTP--R 239 (1057)
Q Consensus 165 ~m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~-~~y~~~--~e~l~~--~ 239 (1057)
.|||++|+.... |+ ..+||..-++-.|.++|+++| |+|.|+++.+..-... ...... ...+.. +
T Consensus 5 ~~~il~v~~E~~----p~-----~k~Ggl~dv~~~Lp~al~~~g--~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~ 73 (489)
T PRK14098 5 NFKVLYVSGEVS----PF-----VRVSALADFMASFPQALEEEG--FEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLK 73 (489)
T ss_pred CcEEEEEeecch----hh-----cccchHHHHHHHHHHHHHHCC--CeEEEEcCCCCchhhhhhccccceEEEEEEEeec
Confidence 399999997654 33 789999999999999999999 9999999876321100 000000 000000 0
Q ss_pred CCCcccc-ccC--CCCCeEEEEccCCCcccccccccCCCCh---hHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEc
Q 001541 240 NSDDFMD-DMG--ESSGAYIIRIPFGPKDKYIAKELLWPHI---PEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGH 313 (1057)
Q Consensus 240 ~~~~~~~-~~~--~~~gv~i~rip~~p~~~~l~k~~l~~~l---~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h 313 (1057)
....... ... ...++.++.+... .+..+..+...- ..+.+...++..- .++..+.+.. ...+|||||+|
T Consensus 74 ~~~~~~~~~~~~~~~~~v~~~~~~~~---~~f~r~~~y~~~~~g~~~~d~~~rf~~f-~~a~l~~~~~-~~~~pDiiH~h 148 (489)
T PRK14098 74 EKTDLLHVKVTALPSSKIQTYFLYNE---KYFKRNGLFTDMSLGGDLKGSAEKVIFF-NVGVLETLQR-LGWKPDIIHCH 148 (489)
T ss_pred CeeEEEEEEEecccCCCceEEEEeCH---HHcCCCCcCCCCccCCCCCcHHHHHHHH-HHHHHHHHHh-cCCCCCEEEec
Confidence 0000000 000 1113444443321 122222222110 0011222222211 1111121211 12579999999
Q ss_pred CCCchHHHHHHHhcC-------CCCEEEEecCCchhhHH--HHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEec
Q 001541 314 YADAGDSAALLSGAL-------NVPMLFTGHSLGRDKLE--QLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 384 (1057)
Q Consensus 314 ~~~~~~~a~~l~~~~-------~iP~V~t~H~l~~~~~~--~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~ 384 (1057)
.|.++.++.+++... ++|+|+|+|++...... ..+.. .++.............+...+.++..||.|+|+
T Consensus 149 dw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~-~~~~~~~~~~~~~~~~~n~lk~~i~~ad~VitV 227 (489)
T PRK14098 149 DWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQK-LLPEEVCSGLHREGDEVNMLYTGVEHADLLTTT 227 (489)
T ss_pred CcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHH-hCCHHhhhhhhhcCCcccHHHHHHHhcCcceee
Confidence 999999888887544 89999999997542110 00000 011111111101111233456789999999999
Q ss_pred CHHHHHHHHhh-hCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCC-Cch
Q 001541 385 TRQEIEEQWRL-YDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPD-PPI 462 (1057)
Q Consensus 385 S~~~~~~~~~~-y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~-~~~ 462 (1057)
|+...+++... ..++ .+...|+.+ ..++.+||||||.+.|.|..... ....+........ ...
T Consensus 228 S~~~a~ei~~~~~~~~--gl~~~l~~~-----------~~kl~~I~NGID~~~~~p~~d~~--~~~~~~~~~~~~k~~~k 292 (489)
T PRK14098 228 SPRYAEEIAGDGEEAF--GLDKVLEER-----------KMRLHGILNGIDTRQWNPSTDKL--IKKRYSIERLDGKLENK 292 (489)
T ss_pred CHHHHHHhCcCCCCCc--ChHHHHHhc-----------CCCeeEEeCCccccccCCccccc--ccccCCcchhhhHHHHH
Confidence 99988876431 1111 122222221 23899999999999998754211 0000000000000 001
Q ss_pred HHHHHhhhCC--CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHH
Q 001541 463 WSEIMRFFTN--PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDK 539 (1057)
Q Consensus 463 ~~~~~~~~~~--~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~ 539 (1057)
...++++..+ ++.++|+++||+.+.||++.+++|+.++.+ . ++. +|+|+|+. .+...+.+++.+
T Consensus 293 ~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~--~--~~~lvivG~G~~---------~~~~~l~~l~~~ 359 (489)
T PRK14098 293 KALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE--L--DIQLVICGSGDK---------EYEKRFQDFAEE 359 (489)
T ss_pred HHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh--c--CcEEEEEeCCCH---------HHHHHHHHHHHH
Confidence 1222333333 467899999999999999999999999863 2 444 47788753 245677788887
Q ss_pred cCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhc----CCceEEe
Q 001541 540 YDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV----LDNGLLV 615 (1057)
Q Consensus 540 ~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~----~~~Gllv 615 (1057)
++ ++|.|.|.++.+++..+|+.| |+||+||..|+||++.+|||+||+|+|++++||..|++.+ +.+|++|
T Consensus 360 ~~--~~V~~~g~~~~~~~~~~~a~a----Di~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~ 433 (489)
T PRK14098 360 HP--EQVSVQTEFTDAFFHLAIAGL----DMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIF 433 (489)
T ss_pred CC--CCEEEEEecCHHHHHHHHHhC----CEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEe
Confidence 74 689999999888899999999 9999999999999999999999999999999999988864 6799999
Q ss_pred CCCCHHHHHHHHHHHH---hCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHccc
Q 001541 616 DPHDQQSVADALLKLV---ADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCK 668 (1057)
Q Consensus 616 ~p~d~~~la~aI~~ll---~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~ 668 (1057)
++.|+++++++|.+++ .+++.|+++++++++ +.|||+..+++|+++|+++.
T Consensus 434 ~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~y~~lY~~~~ 487 (489)
T PRK14098 434 HDYTPEALVAKLGEALALYHDEERWEELVLEAME--RDFSWKNSAEEYAQLYRELL 487 (489)
T ss_pred CCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--CCCChHHHHHHHHHHHHHHh
Confidence 9999999999999865 588888888776632 68999999999999999765
No 22
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=2.3e-35 Score=340.87 Aligned_cols=365 Identities=21% Similarity=0.309 Sum_probs=265.6
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccc
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 245 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1057)
|||++++ + |..||.++++.+|+++|++.| |+|+|+|... +.. .
T Consensus 1 mki~~~~---~-----------p~~gG~~~~~~~la~~L~~~G--~~v~v~~~~~--~~~-----~-------------- 43 (371)
T cd04962 1 MKIGIVC---Y-----------PTYGGSGVVATELGKALARRG--HEVHFITSSR--PFR-----L-------------- 43 (371)
T ss_pred CceeEEE---E-----------eCCCCccchHHHHHHHHHhcC--CceEEEecCC--Ccc-----h--------------
Confidence 7899997 2 568999999999999999999 9999998753 110 0
Q ss_pred cccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHH
Q 001541 246 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 325 (1057)
Q Consensus 246 ~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~ 325 (1057)
....+++.+..++.... +......+. ... ...+.+.+.+ .+||+||+|++........++
T Consensus 44 --~~~~~~~~~~~~~~~~~----~~~~~~~~~----~~~---~~~l~~~i~~-------~~~divh~~~~~~~~~~~~~~ 103 (371)
T cd04962 44 --DEYSPNIFFHEVEVPQY----PLFQYPPYD----LAL---ASKIAEVAKR-------YKLDLLHVHYAVPHAVAAYLA 103 (371)
T ss_pred --hhhccCeEEEEeccccc----chhhcchhH----HHH---HHHHHHHHhc-------CCccEEeecccCCccHHHHHH
Confidence 00113444443332111 000000110 011 1112222222 579999999864333322222
Q ss_pred ----hcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCCh
Q 001541 326 ----GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP 401 (1057)
Q Consensus 326 ----~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~ 401 (1057)
+..++|+|++.|+...... +. ...+ +. .++.+++.+|.|++.|+...+.+...+.
T Consensus 104 ~~~~~~~~~~~i~~~h~~~~~~~------~~------~~~~---~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~---- 162 (371)
T cd04962 104 REILGKKDLPVVTTLHGTDITLV------GQ------DPSF---QP--ATRFSIEKSDGVTAVSESLRQETYELFD---- 162 (371)
T ss_pred HHhcCcCCCcEEEEEcCCccccc------cc------cccc---hH--HHHHHHhhCCEEEEcCHHHHHHHHHhcC----
Confidence 2238999999997633211 00 0011 11 2345789999999999987766544331
Q ss_pred HHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEE
Q 001541 402 VLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILAL 481 (1057)
Q Consensus 402 ~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~v 481 (1057)
...++.+||||+|...|.+.... ....++...+++++++++
T Consensus 163 -------------------~~~~i~vi~n~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~il~~ 203 (371)
T cd04962 163 -------------------ITKEIEVIPNFVDEDRFRPKPDE--------------------ALKRRLGAPEGEKVLIHI 203 (371)
T ss_pred -------------------CcCCEEEecCCcCHhhcCCCchH--------------------HHHHhcCCCCCCeEEEEe
Confidence 11279999999998776542210 112334445678899999
Q ss_pred eCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHH
Q 001541 482 ARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEI 560 (1057)
Q Consensus 482 GRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~l 560 (1057)
||+.+.||++.+++|+..+... .+.. +++|.+++ ...+.+++.++++.++|.|+|.. +++..+
T Consensus 204 g~l~~~K~~~~li~a~~~l~~~---~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~ 267 (371)
T cd04962 204 SNFRPVKRIDDVIRIFAKVRKE---VPARLLLVGDGPE-----------RSPAERLARELGLQDDVLFLGKQ--DHVEEL 267 (371)
T ss_pred cccccccCHHHHHHHHHHHHhc---CCceEEEEcCCcC-----------HHHHHHHHHHcCCCceEEEecCc--ccHHHH
Confidence 9999999999999999998642 2233 57788765 35567788889998899999974 689999
Q ss_pred HHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHH
Q 001541 561 YRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARC 640 (1057)
Q Consensus 561 y~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~ 640 (1057)
|+.| |++|+||..|+||++++|||+||+|||+|+.||..|++.++.+|++++++|.++++++|.+++++++.+.++
T Consensus 268 ~~~~----d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~~~~~~~ 343 (371)
T cd04962 268 LSIA----DLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDDELWQEF 343 (371)
T ss_pred HHhc----CEEEeCCCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHH
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 001541 641 RQNGLKNI-HLFSWPEHCKTYLSRIAGC 667 (1057)
Q Consensus 641 ~~~~~~~v-~~fsw~~~a~~~l~~~~~~ 667 (1057)
++++++.+ ++|||+.++++|.++|+++
T Consensus 344 ~~~~~~~~~~~fs~~~~~~~~~~~y~~~ 371 (371)
T cd04962 344 SRAARNRAAERFDSERIVPQYEALYRRL 371 (371)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 99999997 7999999999999999763
No 23
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=3.7e-35 Score=340.61 Aligned_cols=366 Identities=21% Similarity=0.231 Sum_probs=267.4
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcccc
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
+|++|..+. ..||+++++.+|+++|.+.| +++.|++....+ . +..
T Consensus 3 ~il~ii~~~-------------~~GG~e~~~~~l~~~l~~~~--~~~~v~~~~~~~-~----~~~--------------- 47 (374)
T TIGR03088 3 LIVHVVYRF-------------DVGGLENGLVNLINHLPADR--YRHAVVALTEVS-A----FRK--------------- 47 (374)
T ss_pred eEEEEeCCC-------------CCCcHHHHHHHHHhhccccc--cceEEEEcCCCC-h----hHH---------------
Confidence 788887322 47999999999999999998 999998753211 0 000
Q ss_pred ccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHh
Q 001541 247 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSG 326 (1057)
Q Consensus 247 ~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~ 326 (1057)
.....|+.+++++..+. ..+ .+ +.++.+.+.+ .+|||||+|... ...+..++.
T Consensus 48 -~~~~~~i~~~~~~~~~~----------~~~-~~-------~~~l~~~l~~-------~~~Divh~~~~~-~~~~~~~~~ 100 (374)
T TIGR03088 48 -RIQRPDVAFYALHKQPG----------KDV-AV-------YPQLYRLLRQ-------LRPDIVHTRNLA-ALEAQLPAA 100 (374)
T ss_pred -HHHhcCceEEEeCCCCC----------CCh-HH-------HHHHHHHHHH-------hCCCEEEEcchh-HHHHHHHHH
Confidence 01123778887764321 000 11 1122222333 579999999753 333444555
Q ss_pred cCCCCE-EEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHH
Q 001541 327 ALNVPM-LFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1057)
Q Consensus 327 ~~~iP~-V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~ 405 (1057)
..++|. +++.|+....... + ....+++. ++.....+|.++++|+...+.+...+
T Consensus 101 ~~~~~~~i~~~h~~~~~~~~-----~------~~~~~~~~-----~~~~~~~~~~~i~vs~~~~~~~~~~~--------- 155 (374)
T TIGR03088 101 LAGVPARIHGEHGRDVFDLD-----G------SNWKYRWL-----RRLYRPLIHHYVAVSRDLEDWLRGPV--------- 155 (374)
T ss_pred hcCCCeEEEeecCcccccch-----h------hHHHHHHH-----HHHHHhcCCeEEEeCHHHHHHHHHhc---------
Confidence 567775 6677754221110 0 00112222 23356678999999998766554332
Q ss_pred HHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCC
Q 001541 406 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 485 (1057)
Q Consensus 406 ~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~ 485 (1057)
|.+..++.+||||+|.+.|.+..... ...........++++|+++||+.
T Consensus 156 -------------~~~~~~~~vi~ngvd~~~~~~~~~~~------------------~~~~~~~~~~~~~~~i~~vGrl~ 204 (374)
T TIGR03088 156 -------------KVPPAKIHQIYNGVDTERFHPSRGDR------------------SPILPPDFFADESVVVGTVGRLQ 204 (374)
T ss_pred -------------CCChhhEEEeccCccccccCCCccch------------------hhhhHhhcCCCCCeEEEEEecCC
Confidence 22223899999999998886532110 01112223345678999999999
Q ss_pred CCCCHHHHHHHHHhcccccCC--CcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHH
Q 001541 486 PKKNITTLVKAFGECRPLREL--ANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYR 562 (1057)
Q Consensus 486 ~~Kgi~~Ll~A~~~l~~~~~~--~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~ 562 (1057)
+.||++.+++|+.++....+. +++.| ++|+++. ...+.++++.+++..+|.|+|. .+++..+|+
T Consensus 205 ~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~ 271 (374)
T TIGR03088 205 AVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGPA-----------RGACEQMVRAAGLAHLVWLPGE--RDDVPALMQ 271 (374)
T ss_pred cccCHHHHHHHHHHHHHhCcccccceEEEEecCCch-----------HHHHHHHHHHcCCcceEEEcCC--cCCHHHHHH
Confidence 999999999999998754432 35665 7788764 3567788889999899999996 689999999
Q ss_pred HhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHH
Q 001541 563 LAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQ 642 (1057)
Q Consensus 563 ~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~ 642 (1057)
.| |++|+||..||||++++||||||+|||+|+.||..|++.++.+|++++++|+++++++|.+++++++.++.+++
T Consensus 272 ~a----di~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~ 347 (374)
T TIGR03088 272 AL----DLFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSDPAARRAHGA 347 (374)
T ss_pred hc----CEEEeccccccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHH
Confidence 99 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHh-hcCCHHHHHHHHHHHHHcc
Q 001541 643 NGLKNI-HLFSWPEHCKTYLSRIAGC 667 (1057)
Q Consensus 643 ~~~~~v-~~fsw~~~a~~~l~~~~~~ 667 (1057)
++++.+ ++|||+.++++|.++|.++
T Consensus 348 ~a~~~~~~~fs~~~~~~~~~~~y~~~ 373 (374)
T TIGR03088 348 AGRARAEQQFSINAMVAAYAGLYDQL 373 (374)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 999998 7999999999999999875
No 24
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=3.3e-35 Score=344.25 Aligned_cols=279 Identities=19% Similarity=0.242 Sum_probs=228.1
Q ss_pred CcceEEEEcCCCchHHHHHHHh--cCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEE
Q 001541 305 VWPVAIHGHYADAGDSAALLSG--ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVI 382 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~--~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi 382 (1057)
..||+||+|++.++..+..++. .++.|.++|+|+....... . ...+.. ..+..++++|.|+
T Consensus 117 ~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~-~-----------~~~~~~-----~~~~~~~~ad~vv 179 (406)
T PRK15427 117 FVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSRE-V-----------LNHYTP-----EYQQLFRRGDLML 179 (406)
T ss_pred CCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccch-h-----------hhhhhH-----HHHHHHHhCCEEE
Confidence 5699999999887777777765 4566889999976422110 0 001110 1234578999999
Q ss_pred ecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCch
Q 001541 383 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPI 462 (1057)
Q Consensus 383 ~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~ 462 (1057)
++|+...+.+... +. +..++.+||||+|.+.|.+.....
T Consensus 180 ~~S~~~~~~l~~~--g~---------------------~~~ki~vi~nGvd~~~f~~~~~~~------------------ 218 (406)
T PRK15427 180 PISDLWAGRLQKM--GC---------------------PPEKIAVSRMGVDMTRFSPRPVKA------------------ 218 (406)
T ss_pred ECCHHHHHHHHHc--CC---------------------CHHHEEEcCCCCCHHHcCCCcccc------------------
Confidence 9999877665432 12 223899999999999886432110
Q ss_pred HHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcC
Q 001541 463 WSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYD 541 (1057)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~ 541 (1057)
..+...|+++||+.+.||++.+++|+..+.+. .+++.+ |+|+|+. ..++.+++.+++
T Consensus 219 ---------~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~--~~~~~l~ivG~G~~-----------~~~l~~~~~~~~ 276 (406)
T PRK15427 219 ---------PATPLEIISVARLTEKKGLHVAIEACRQLKEQ--GVAFRYRILGIGPW-----------ERRLRTLIEQYQ 276 (406)
T ss_pred ---------CCCCeEEEEEeCcchhcCHHHHHHHHHHHHhh--CCCEEEEEEECchh-----------HHHHHHHHHHcC
Confidence 13446799999999999999999999998643 346665 8898864 467888999999
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCC------CCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEe
Q 001541 542 LYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFI------EPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLV 615 (1057)
Q Consensus 542 l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~------Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv 615 (1057)
+.++|.|+|+++++++.++|+.| |+||+||.. ||||++++||||||+|||+|+.||..|++.++.+|+++
T Consensus 277 l~~~V~~~G~~~~~el~~~l~~a----Dv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv 352 (406)
T PRK15427 277 LEDVVEMPGFKPSHEVKAMLDDA----DVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLV 352 (406)
T ss_pred CCCeEEEeCCCCHHHHHHHHHhC----CEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEe
Confidence 99999999999999999999999 999999974 99999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 001541 616 DPHDQQSVADALLKLVA-DKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGC 667 (1057)
Q Consensus 616 ~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~~~ 667 (1057)
+|+|+++++++|.++++ |+++++++++++++.+ ++|+|+..++++.++|+++
T Consensus 353 ~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~~ 406 (406)
T PRK15427 353 PENDAQALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQAL 406 (406)
T ss_pred CCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 99999999999999999 9999999999999999 6999999999999999753
No 25
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=5.4e-35 Score=350.50 Aligned_cols=444 Identities=18% Similarity=0.134 Sum_probs=280.4
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccc-c--C-CCCCC
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEM-L--T-PRNSD 242 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~-l--~-~~~~~ 242 (1057)
||++||.... ....+||...++..|+++|+++| |+|+|+++.+..-...+........ . . .....
T Consensus 1 ~Il~v~~E~~---------p~~k~GGl~~~~~~L~~aL~~~G--~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (476)
T cd03791 1 KVLFVASEVA---------PFAKTGGLGDVVGALPKALAKLG--HDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPE 69 (476)
T ss_pred CEEEEEcccc---------ccccCCcHHHHHHHHHHHHHHCC--CeEEEEecCCcchhhHhccCeEEEEEEeeccCCcee
Confidence 5899986443 23479999999999999999999 9999999876421110000000000 0 0 00000
Q ss_pred ccccccCCCCCeEEEEccCCCcccccccc-----cCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCc
Q 001541 243 DFMDDMGESSGAYIIRIPFGPKDKYIAKE-----LLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADA 317 (1057)
Q Consensus 243 ~~~~~~~~~~gv~i~rip~~p~~~~l~k~-----~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~ 317 (1057)
.........+|+.+++++.... ..+. ...+|...... +..+.......+.+ . ..+|||||+|.|.+
T Consensus 70 ~~~~~~~~~~gv~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~f~~~~~~~l~~----~-~~~pDviH~hd~~t 140 (476)
T cd03791 70 YVGVFELPVDGVPVYFLDNPDY---FDRPGLYDDSGYDYEDNAER-FALFSRAALELLRR----L-GWKPDIIHCHDWHT 140 (476)
T ss_pred EEEEEEEEeCCceEEEEcChHH---cCCCCCCCccCCCCccHHHH-HHHHHHHHHHHHHh----c-CCCCcEEEECchHH
Confidence 0000011235788888765321 1111 11222221111 11111111111211 1 25799999999998
Q ss_pred hHHHHHHHhc------CCCCEEEEecCCchhhH---HHHHHhhhcc-hHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHH
Q 001541 318 GDSAALLSGA------LNVPMLFTGHSLGRDKL---EQLLKQARLS-RDEINATYKIMRRIEAEELSLDASEIVITSTRQ 387 (1057)
Q Consensus 318 ~~~a~~l~~~------~~iP~V~t~H~l~~~~~---~~l~~~g~~~-~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~ 387 (1057)
+.++..++.. .++|+|+|.|++..... ..+...+... .......+.....+..++.++..||.|+++|+.
T Consensus 141 ~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~ 220 (476)
T cd03791 141 GLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPT 220 (476)
T ss_pred HHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecCHh
Confidence 8888887766 38999999999854321 1111110000 000000001112233567789999999999998
Q ss_pred HHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCch-HHHH
Q 001541 388 EIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPI-WSEI 466 (1057)
Q Consensus 388 ~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 466 (1057)
..++....+.+.. +...+ .....++.+||||||.+.|.|....... ..+........... ...+
T Consensus 221 ~~~~i~~~~~~~g--l~~~~-----------~~~~~ki~~I~NGid~~~~~p~~~~~~~--~~~~~~~~~~~~~~k~~l~ 285 (476)
T cd03791 221 YAREILTPEFGEG--LDGLL-----------RARAGKLSGILNGIDYDVWNPATDPHLP--ANYSADDLEGKAENKAALQ 285 (476)
T ss_pred HHHHhCCCCCCcc--hHHHH-----------HhccCCeEEEeCCCcCcccCccccchhh--hcCCccccccHHHHHHHHH
Confidence 7777543211110 00000 1122489999999999999865321100 00000000000111 1122
Q ss_pred HhhhC--CCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHcCCC
Q 001541 467 MRFFT--NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 543 (1057)
Q Consensus 467 ~~~~~--~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~ 543 (1057)
.++.. .++.++|+++||+.+.||++.+++|+..+.+. . +. +++|+++. .+...+.+++.++ .
T Consensus 286 ~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~--~~lvi~G~g~~---------~~~~~~~~~~~~~--~ 350 (476)
T cd03791 286 EELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLEL--G--GQLVILGSGDP---------EYEEALRELAARY--P 350 (476)
T ss_pred HHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHc--C--cEEEEEecCCH---------HHHHHHHHHHHhC--C
Confidence 33333 36889999999999999999999999998642 2 44 47787742 2345666666665 4
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCC------ceEEeCC
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLD------NGLLVDP 617 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~------~Gllv~p 617 (1057)
+++.|.+..+.+.+..+|+.| |++|+||..||||++++|||+||+|||+++.||+.|++.++. +|++++|
T Consensus 351 ~~v~~~~~~~~~~~~~~~~~a----Dv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~ 426 (476)
T cd03791 351 GRVAVLIGYDEALAHLIYAGA----DFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEG 426 (476)
T ss_pred CcEEEEEeCCHHHHHHHHHhC----CEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCC
Confidence 677776666667788999999 999999999999999999999999999999999999999887 9999999
Q ss_pred CCHHHHHHHHHHHHh---CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHc
Q 001541 618 HDQQSVADALLKLVA---DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAG 666 (1057)
Q Consensus 618 ~d~~~la~aI~~ll~---d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~ 666 (1057)
.|+++++++|.++++ +++.++++++++++ ..|||+.++++|+++|++
T Consensus 427 ~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~y~~ 476 (476)
T cd03791 427 YNADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYLELYRS 476 (476)
T ss_pred CCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHHhC
Confidence 999999999999886 67788888777654 479999999999999863
No 26
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=1.3e-34 Score=339.04 Aligned_cols=377 Identities=17% Similarity=0.178 Sum_probs=254.5
Q ss_pred HHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCcccccccccCCCC
Q 001541 197 VVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPH 276 (1057)
Q Consensus 197 v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~ 276 (1057)
..+||++|+++| |+|+++|.... +.. ..|+++++++.++.. .+ ..++|
T Consensus 13 ~~~la~~L~~~G--~~v~~~~~~~~-~~~-------------------------~~~v~~~~~~~~~~~---~~-~~~~~ 60 (396)
T cd03818 13 FRHLAPALAAQG--HEVVFLTEPNA-APP-------------------------PGGVRVVRYRPPRGP---TS-GTHPY 60 (396)
T ss_pred HHHHHHHHHHCC--CEEEEEecCCC-CCC-------------------------CCCeeEEEecCCCCC---CC-CCCcc
Confidence 356999999998 99999998642 110 016899998865541 12 56778
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhc-CCCCEEEEecCCchhhHHHH-HHhhhcc
Q 001541 277 IPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQL-LKQARLS 354 (1057)
Q Consensus 277 l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l-~~~g~~~ 354 (1057)
+..+...+..... +.+.+.... .++.+|||||+|.... .+..++.. .++|+|.+.|.++....... .......
T Consensus 61 ~~~~~~~~~~~~~-~~~~~~~~~--~~~~~pdvi~~h~~~~--~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 135 (396)
T cd03818 61 LREFEEAVLRGQA-VARALLALR--AKGFRPDVIVAHPGWG--ETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPP 135 (396)
T ss_pred chhHHHHHHHHHH-HHHHHHHHH--hcCCCCCEEEECCccc--hhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCC
Confidence 8777665543322 222222221 1336799999997432 12223333 46899887654332110000 0000000
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCC
Q 001541 355 RDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEF 434 (1057)
Q Consensus 355 ~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~ 434 (1057)
. .....++..+.......+..||.||++|+...+.+...+. .++.|||||+|.
T Consensus 136 ~--~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~-------------------------~ki~vI~ngvd~ 188 (396)
T cd03818 136 S--LDDALRLRNRNALILLALAQADAGVSPTRWQRSTFPAELR-------------------------SRISVIHDGIDT 188 (396)
T ss_pred c--hhHHHHHHHhhhHhHHHHHhCCEEECCCHHHHhhCcHhhc-------------------------cceEEeCCCccc
Confidence 0 0001111111112446799999999999987665332221 289999999999
Q ss_pred CCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeC-CCCCCCHHHHHHHHHhcccccCCCcEEE-E
Q 001541 435 HHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALAR-PDPKKNITTLVKAFGECRPLRELANLTL-I 512 (1057)
Q Consensus 435 ~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGR-l~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-I 512 (1057)
+.|.|....... ........++.++|+|+|| +.+.||++.+++|+..+.+. .+++.+ |
T Consensus 189 ~~f~~~~~~~~~------------------~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~--~~~~~lvi 248 (396)
T cd03818 189 DRLRPDPQARLR------------------LPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRA--RPDARVVI 248 (396)
T ss_pred cccCCCchhhhc------------------ccccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHH--CCCcEEEE
Confidence 998764311000 0000112356789999998 99999999999999998754 345554 6
Q ss_pred EecCC-CCcccchhhHHHHHHHHHHHH-HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHc
Q 001541 513 MGNRD-GIDEMSSTSASVLLSVLKLID-KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH 590 (1057)
Q Consensus 513 vG~~~-~~~~~~~~~~~~~~~l~~l~~-~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~ 590 (1057)
+|++. .+.........+...+.+... +++ .++|.|+|+++.++++.+|+.| |++|+||..|+||++++|||||
T Consensus 249 vG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~V~f~G~v~~~~~~~~l~~a----dv~v~~s~~e~~~~~llEAmA~ 323 (396)
T cd03818 249 VGGDGVSYGAPPPDGESWKQHMLDELGGRLD-LSRVHFLGRVPYDQYLALLQVS----DVHVYLTYPFVLSWSLLEAMAC 323 (396)
T ss_pred EcCCCcccCCCCCCcccHHHHHHHHhhcccC-cceEEEeCCCCHHHHHHHHHhC----cEEEEcCcccccchHHHHHHHC
Confidence 67532 111111101112223222222 223 3789999999999999999999 9999999999999999999999
Q ss_pred CCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHH
Q 001541 591 GLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLS 662 (1057)
Q Consensus 591 G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~ 662 (1057)
|+|||+|+.||..|++.++.+|++++|.|+++++++|.++++++++++++++++++.+ ++|||+.++++|++
T Consensus 324 G~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 324 GCLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLDDPARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred CCCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999 57999999999863
No 27
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=2e-34 Score=336.12 Aligned_cols=387 Identities=19% Similarity=0.211 Sum_probs=266.0
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccc
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 245 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1057)
|||+++.+.. ..||+++++.+||++|++.| |+|+|+|..... . ..+.
T Consensus 1 mkIl~~~~~~-------------~~gG~e~~~~~la~~L~~~G--~~V~v~~~~~~~--~-~~~~--------------- 47 (392)
T cd03805 1 LRVAFIHPDL-------------GIGGAERLVVDAALALQSRG--HEVTIYTSHHDP--S-HCFE--------------- 47 (392)
T ss_pred CeEEEECCCC-------------CCchHHHHHHHHHHHHHhCC--CeEEEEcCCCCc--h-hcch---------------
Confidence 7899996322 37999999999999999999 999999874311 0 0000
Q ss_pred cccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHH
Q 001541 246 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 325 (1057)
Q Consensus 246 ~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~ 325 (1057)
+. ...++.+..++. ++++. ++.....+ ..++......+...+ ....+||+||+|....+..+. .
T Consensus 48 -~~-~~~~~~i~~~~~-----~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~--~~~~~~Dvi~~~~~~~~~~~~--~ 111 (392)
T cd03805 48 -ET-KDGTLPVRVRGD-----WLPRS-IFGRFHIL----CAYLRMLYLALYLLL--LPDEKYDVFIVDQVSACVPLL--K 111 (392)
T ss_pred -hc-cCCeeEEEEEeE-----EEcch-hhHhHHHH----HHHHHHHHHHHHHHh--cccCCCCEEEEcCcchHHHHH--H
Confidence 00 011244433221 11111 11111111 111111111111001 112579999999765443322 2
Q ss_pred hcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHH-HHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHH
Q 001541 326 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYK-IMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 404 (1057)
Q Consensus 326 ~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk-~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~ 404 (1057)
...+.|+|++.|... .. ... ........++ .+.. .|+++++.+|.|+++|+...+.+...+.....
T Consensus 112 ~~~~~~~i~~~h~~~--~~---~~~---~~~~~~~~~~~~~~~--~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~--- 178 (392)
T cd03805 112 LFSPSKILFYCHFPD--QL---LAQ---RGSLLKRLYRKPFDW--LEEFTTGMADKIVVNSNFTASVFKKTFPSLAK--- 178 (392)
T ss_pred HhcCCcEEEEEecCh--HH---hcC---CCcHHHHHHHHHHHH--HHHHHhhCceEEEEcChhHHHHHHHHhccccc---
Confidence 223489999999432 11 100 0111122222 2223 37789999999999999877766554432211
Q ss_pred HHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCC
Q 001541 405 RKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARP 484 (1057)
Q Consensus 405 ~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl 484 (1057)
..+.|||||+|.+.|.+..... ........++.++|+++||+
T Consensus 179 ------------------~~~~vi~n~vd~~~~~~~~~~~--------------------~~~~~~~~~~~~~i~~~grl 220 (392)
T cd03805 179 ------------------NPREVVYPCVDTDSFESTSEDP--------------------DPGLLIPKSGKKTFLSINRF 220 (392)
T ss_pred ------------------CCcceeCCCcCHHHcCcccccc--------------------cccccccCCCceEEEEEeee
Confidence 1346999999998886532110 01112234677899999999
Q ss_pred CCCCCHHHHHHHHHhcccccC-CCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHH-cCCCCCEEeCCCCCCCcHHHHH
Q 001541 485 DPKKNITTLVKAFGECRPLRE-LANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDK-YDLYGQVAYPKHHKQSDVPEIY 561 (1057)
Q Consensus 485 ~~~Kgi~~Ll~A~~~l~~~~~-~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~-~~l~~~V~f~g~v~~~dl~~ly 561 (1057)
.+.||++.+++|+.++....+ .+++.| ++|+++.. .....++..++.+++++ +++.++|.|+|+++.+++..+|
T Consensus 221 ~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~---~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~~~~~~l 297 (392)
T cd03805 221 ERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPR---VAENVEYLEELQRLAEELLLLEDQVIFLPSISDSQKELLL 297 (392)
T ss_pred cccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCC---CchhHHHHHHHHHHHHHhcCCCceEEEeCCCChHHHHHHH
Confidence 999999999999999965321 145664 77876542 11234567889999999 8999999999999999999999
Q ss_pred HHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHH
Q 001541 562 RLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCR 641 (1057)
Q Consensus 562 ~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~ 641 (1057)
+.| |++++||..|+||++++||||||+|||+|+.||..|++.++.+|+++++ |+++++++|.+++++++.+++++
T Consensus 298 ~~a----d~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~~~~~~~~ 372 (392)
T cd03805 298 SSA----RALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDPDLADRMG 372 (392)
T ss_pred hhC----eEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhChHHHHHHH
Confidence 999 9999999999999999999999999999999999999999899999976 99999999999999999999999
Q ss_pred HHHHHHh-hcCCHHHHHHHH
Q 001541 642 QNGLKNI-HLFSWPEHCKTY 660 (1057)
Q Consensus 642 ~~~~~~v-~~fsw~~~a~~~ 660 (1057)
+++++.+ ++|||+.+++++
T Consensus 373 ~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 373 AAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred HHHHHHHHHhcCHHHHhhhC
Confidence 9999998 799999998764
No 28
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=8.1e-34 Score=345.68 Aligned_cols=392 Identities=16% Similarity=0.107 Sum_probs=264.2
Q ss_pred Ccce-EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCC--Ce----------eeEEEEecCCCCCCCCCcc
Q 001541 163 GKKL-YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMP--GV----------YRVDLLTRQVSAPDVDWSY 229 (1057)
Q Consensus 163 ~~~m-~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~G--gv----------~~V~vit~~~~~~~~~~~y 229 (1057)
.++. ||++|. +++ ..||+++++.+||.+|.+.+ |- ..|.+++.....+. ..+
T Consensus 278 ~~~~~rIl~vi-~sl------------~~GGAEr~~~~La~~l~~~~~~~~~~~g~g~~~~~~V~~~~~~~~~g~--~~~ 342 (694)
T PRK15179 278 ESFVGPVLMIN-GSL------------GAGGAERQFVNTAVALQSAIQQGQSIAGYGVLGPVQVVCRSLRSREGA--DFF 342 (694)
T ss_pred CCCcceEEEEe-CCC------------CCCcHHHHHHHHHHHHHhcccCcccccCccCCCCcEEEEEecccccCc--chH
Confidence 4556 899997 332 47999999999999999983 00 23444432110000 000
Q ss_pred CCcccccCCCCCCccccccCCCCCeEEEEccCCCccccccccc-CCCChhHH----HHHHHHHHHHHHHHHHhhhcCCCC
Q 001541 230 GEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKEL-LWPHIPEF----VDGALNHIIRMSNVLGEQIGGGKP 304 (1057)
Q Consensus 230 ~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l~k~~-l~~~l~~f----~~~~l~~~~~~~k~L~~~~~~~~~ 304 (1057)
.......|+.++.++..+. ....... ....+..+ .......+.++.+.+++
T Consensus 343 ----------------~~~L~~~Gv~v~~l~~~~~-~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~------- 398 (694)
T PRK15179 343 ----------------AATLADAGIPVSVYSDMQA-WGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRS------- 398 (694)
T ss_pred ----------------HHHHHhCCCeEEEeccCCc-cCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHH-------
Confidence 0001125778877765432 1111100 01111110 01122223333334443
Q ss_pred CcceEEEEcCCCchHHHHHHHhcCCCCEEE-EecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEe
Q 001541 305 VWPVAIHGHYADAGDSAALLSGALNVPMLF-TGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 383 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~-t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~ 383 (1057)
.+|||||+|...+..++.++++..++|+|+ +.|++........ ....|+... .......++.+++
T Consensus 399 ~kpDIVH~h~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~~~~----------~~~~~~~l~----~~l~~~~~~i~Vs 464 (694)
T PRK15179 399 SVPSVVHIWQDGSIFACALAALLAGVPRIVLSVRTMPPVDRPDR----------YRVEYDIIY----SELLKMRGVALSS 464 (694)
T ss_pred cCCcEEEEeCCcHHHHHHHHHHHcCCCEEEEEeCCCccccchhH----------HHHHHHHHH----HHHHhcCCeEEEe
Confidence 579999999988888888888888999876 6676543221100 011111111 1112234456677
Q ss_pred cCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchH
Q 001541 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 463 (1057)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1057)
+|....+.+...+ |.+..++.|||||||...|.+.... ...+
T Consensus 465 ~S~~~~~~l~~~~----------------------g~~~~kI~VI~NGVd~~~f~~~~~~----------------~~~~ 506 (694)
T PRK15179 465 NSQFAAHRYADWL----------------------GVDERRIPVVYNGLAPLKSVQDDAC----------------TAMM 506 (694)
T ss_pred CcHHHHHHHHHHc----------------------CCChhHEEEECCCcCHHhcCCCchh----------------hHHH
Confidence 7776555443322 2233489999999998887642110 0000
Q ss_pred HHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCC
Q 001541 464 SEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDL 542 (1057)
Q Consensus 464 ~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l 542 (1057)
... +.....+.++|+++||+.+.||++.+|+|+.++.+. .+++.| |+|+|+. ...+.+++.++++
T Consensus 507 ~~~-~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~--~p~~~LvIvG~G~~-----------~~~L~~l~~~lgL 572 (694)
T PRK15179 507 AQF-DARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAAS--HPKVRFIMVGGGPL-----------LESVREFAQRLGM 572 (694)
T ss_pred Hhh-ccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHH--CcCeEEEEEccCcc-----------hHHHHHHHHHcCC
Confidence 000 111234567999999999999999999999998643 345664 8898764 4668889999999
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCH--
Q 001541 543 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ-- 620 (1057)
Q Consensus 543 ~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~-- 620 (1057)
.++|.|+|+. ++++.+|+.| |+||+||.+|+||++++||||||+|||+|+.||+.|+|.++.+|++|+|+|.
T Consensus 573 ~~~V~flG~~--~dv~~ll~aa----Dv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~ 646 (694)
T PRK15179 573 GERILFTGLS--RRVGYWLTQF----NAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTA 646 (694)
T ss_pred CCcEEEcCCc--chHHHHHHhc----CEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCCh
Confidence 9999999995 6899999999 9999999999999999999999999999999999999999999999998874
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 001541 621 QSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 621 ~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~ 665 (1057)
++++++|.+++.+......+++++++++ ++|||+.++++|+++|+
T Consensus 647 ~~La~aL~~ll~~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 647 PDVAEALARIHDMCAADPGIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred HHHHHHHHHHHhChhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 6899999998887666677889999998 69999999999999995
No 29
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=1.4e-33 Score=328.20 Aligned_cols=369 Identities=17% Similarity=0.211 Sum_probs=262.8
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcccc
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
||+|+..--+ |+ | +...||+++++.++++.|+ ++|+++|.... ++...
T Consensus 4 ~~~~~~~~~~----~~--p-~~~~g~ve~~~~~~~~~l~-----~~~~~~~~~~~------~~~~~-------------- 51 (380)
T PRK15484 4 KIIFTVTPIF----SI--P-PRGAAAVETWIYQVAKRTS-----IPNRIACIKNP------GYPEY-------------- 51 (380)
T ss_pred eEEEEeccCC----CC--C-CccccHHHHHHHHhhhhcc-----CCeeEEEecCC------CCCch--------------
Confidence 7888886555 22 1 1347999999999999993 47999998752 11110
Q ss_pred ccCCCCCeEEEEccCCCcccccccccCCCCh--hHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHH
Q 001541 247 DMGESSGAYIIRIPFGPKDKYIAKELLWPHI--PEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALL 324 (1057)
Q Consensus 247 ~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l--~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l 324 (1057)
....+|+.++++++... |......|..+ ..+...++..+.. ....++||||+|... .....+.
T Consensus 52 -~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~vi~v~~~~-~~~~~~~ 116 (380)
T PRK15484 52 -TKVNDNCDIHYIGFSRI--YKRLFQKWTRLDPLPYSQRILNIAHK-----------FTITKDSVIVIHNSM-KLYRQIR 116 (380)
T ss_pred -hhccCCCceEEEEeccc--cchhhhhhhccCchhHHHHHHHHHHh-----------cCCCCCcEEEEeCcH-HhHHHHH
Confidence 01124667777755221 11000111000 1112222221111 112469999999853 3334444
Q ss_pred HhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHH
Q 001541 325 SGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 404 (1057)
Q Consensus 325 ~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~ 404 (1057)
.+..+.|+|++.|+.+... .+..++.+|++|+...+.+...+.
T Consensus 117 ~~~~~~~~v~~~h~~~~~~------------------------------~~~~~~~ii~~S~~~~~~~~~~~~------- 159 (380)
T PRK15484 117 ERAPQAKLVMHMHNAFEPE------------------------------LLDKNAKIIVPSQFLKKFYEERLP------- 159 (380)
T ss_pred hhCCCCCEEEEEecccChh------------------------------HhccCCEEEEcCHHHHHHHHhhCC-------
Confidence 5556889999999763211 244678999999887665433221
Q ss_pred HHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCC
Q 001541 405 RKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARP 484 (1057)
Q Consensus 405 ~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl 484 (1057)
..++.+||||+|...|.+... .....++...+++++|+|+||+
T Consensus 160 -----------------~~~i~vIpngvd~~~~~~~~~--------------------~~~~~~~~~~~~~~~il~~Grl 202 (380)
T PRK15484 160 -----------------NADISIVPNGFCLETYQSNPQ--------------------PNLRQQLNISPDETVLLYAGRI 202 (380)
T ss_pred -----------------CCCEEEecCCCCHHHcCCcch--------------------HHHHHHhCCCCCCeEEEEeccC
Confidence 127899999999887764211 0112234444577899999999
Q ss_pred CCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHH
Q 001541 485 DPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRL 563 (1057)
Q Consensus 485 ~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~ 563 (1057)
.+.||++.|++|+..+.+ ..+++.| |+|+++.... .+...+...+.+++..++ .+|.|.|+++.+++..+|+.
T Consensus 203 ~~~Kg~~~Li~A~~~l~~--~~p~~~lvivG~g~~~~~--~~~~~~~~~l~~~~~~l~--~~v~~~G~~~~~~l~~~~~~ 276 (380)
T PRK15484 203 SPDKGILLLMQAFEKLAT--AHSNLKLVVVGDPTASSK--GEKAAYQKKVLEAAKRIG--DRCIMLGGQPPEKMHNYYPL 276 (380)
T ss_pred ccccCHHHHHHHHHHHHH--hCCCeEEEEEeCCccccc--cchhHHHHHHHHHHHhcC--CcEEEeCCCCHHHHHHHHHh
Confidence 999999999999999864 3456665 7787764221 122346667777777776 57999999999999999999
Q ss_pred hhcCCcEEEEcCC-CCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceE-EeCCCCHHHHHHHHHHHHhCHHHHHHHH
Q 001541 564 AAKTKGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGL-LVDPHDQQSVADALLKLVADKQLWARCR 641 (1057)
Q Consensus 564 Aa~~~dv~v~ps~-~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gl-lv~p~d~~~la~aI~~ll~d~~~~~~~~ 641 (1057)
| |++|+||. .|+||++++||||||+|||+|+.||..|++.++.+|+ +++|.|+++++++|.++++|++. .+++
T Consensus 277 a----Dv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~~-~~~~ 351 (380)
T PRK15484 277 A----DLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPEL-TQIA 351 (380)
T ss_pred C----CEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHHH-HHHH
Confidence 9 99999996 5999999999999999999999999999999999998 66899999999999999999985 6799
Q ss_pred HHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 001541 642 QNGLKNI-HLFSWPEHCKTYLSRIAGC 667 (1057)
Q Consensus 642 ~~~~~~v-~~fsw~~~a~~~l~~~~~~ 667 (1057)
+++++.+ ++|||+.++++|+++|+..
T Consensus 352 ~~ar~~~~~~fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 352 EQAKDFVFSKYSWEGVTQRFEEQIHNW 378 (380)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 9999988 7999999999999999764
No 30
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=8.1e-33 Score=317.95 Aligned_cols=359 Identities=19% Similarity=0.208 Sum_probs=256.7
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcccc
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
||++|+.+++ .|..||+++++.+|+++|.++| |+|+|+|........
T Consensus 1 ~i~~i~~~~~----------~~~~gG~~~~~~~la~~L~~~g--~~v~v~~~~~~~~~~--------------------- 47 (363)
T cd04955 1 KIAIIGTRGI----------PAKYGGFETFVEELAPRLVARG--HEVTVYCRSPYPKQK--------------------- 47 (363)
T ss_pred CeEEEecCcC----------CcccCcHHHHHHHHHHHHHhcC--CCEEEEEccCCCCCc---------------------
Confidence 6899988876 3678999999999999999999 999999976421110
Q ss_pred ccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHh
Q 001541 247 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSG 326 (1057)
Q Consensus 247 ~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~ 326 (1057)
....+|+.++++|..... .+..+...+ ..+.+.+. ...++|+||...+.. ..+..+.+
T Consensus 48 -~~~~~~i~~~~~~~~~~~----------~~~~~~~~~----~~~~~~~~------~~~~~~~i~~~~~~~-~~~~~~~~ 105 (363)
T cd04955 48 -ETEYNGVRLIHIPAPEIG----------GLGTIIYDI----LAILHALF------VKRDIDHVHALGPAI-APFLPLLR 105 (363)
T ss_pred -ccccCCceEEEcCCCCcc----------chhhhHHHH----HHHHHHHh------ccCCeEEEEecCccH-HHHHHHHH
Confidence 011358888888753210 011111111 11111111 113566776655544 33334445
Q ss_pred cCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHH
Q 001541 327 ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK 406 (1057)
Q Consensus 327 ~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~ 406 (1057)
..++|+|++.|+....... . .. ...++.+. .|+.+++.+|.|+++|+...+.+...++.
T Consensus 106 ~~~~~~v~~~h~~~~~~~~----~---~~----~~~~~~~~--~~~~~~~~ad~ii~~s~~~~~~~~~~~~~-------- 164 (363)
T cd04955 106 LKGKKVVVNMDGLEWKRAK----W---GR----PAKRYLKF--GEKLAVKFADRLIADSPGIKEYLKEKYGR-------- 164 (363)
T ss_pred hcCCCEEEEccCcceeecc----c---cc----chhHHHHH--HHHHHHhhccEEEeCCHHHHHHHHHhcCC--------
Confidence 5699999999987432210 0 00 01112222 35678899999999999877765443332
Q ss_pred HHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCC
Q 001541 407 LRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDP 486 (1057)
Q Consensus 407 l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~ 486 (1057)
+..+||||+|...+.+.. ...... ..++.+.|+++||+.+
T Consensus 165 -----------------~~~~i~ngv~~~~~~~~~----------------------~~~~~~-~~~~~~~i~~~G~~~~ 204 (363)
T cd04955 165 -----------------DSTYIPYGADHVVSSEED----------------------EILKKY-GLEPGRYYLLVGRIVP 204 (363)
T ss_pred -----------------CCeeeCCCcChhhcchhh----------------------hhHHhc-CCCCCcEEEEEecccc
Confidence 228999999987664300 001111 1234567899999999
Q ss_pred CCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHH-HcCCCCCEEeCCCCCCCcHHHHHHHh
Q 001541 487 KKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLID-KYDLYGQVAYPKHHKQSDVPEIYRLA 564 (1057)
Q Consensus 487 ~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~-~~~l~~~V~f~g~v~~~dl~~ly~~A 564 (1057)
.||++.+++|+.++.. ++. +++|+++.... +.+.+. .+++.++|.|+|+++.+++..+|+.|
T Consensus 205 ~Kg~~~li~a~~~l~~-----~~~l~ivG~~~~~~~-----------~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~a 268 (363)
T cd04955 205 ENNIDDLIEAFSKSNS-----GKKLVIVGNADHNTP-----------YGKLLKEKAAADPRIIFVGPIYDQELLELLRYA 268 (363)
T ss_pred cCCHHHHHHHHHhhcc-----CceEEEEcCCCCcch-----------HHHHHHHHhCCCCcEEEccccChHHHHHHHHhC
Confidence 9999999999998842 344 48888754222 222333 56778899999999999999999999
Q ss_pred hcCCcEEEEcCCC-CCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 001541 565 AKTKGVFINPAFI-EPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQN 643 (1057)
Q Consensus 565 a~~~dv~v~ps~~-Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~ 643 (1057)
|++++||.. |+||++++||||||+|||+|+.|+..|++.+ +|+++++.|. ++++|.+++++++.+.+++.+
T Consensus 269 ----d~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~~l~~~~~~~~~~~~~ 340 (363)
T cd04955 269 ----ALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLEELEADPEEVSAMAKA 340 (363)
T ss_pred ----CEEEeCCccCCCCChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHHHHHhCHHHHHHHHHH
Confidence 999999988 9999999999999999999999999999865 7999987776 999999999999999999999
Q ss_pred HHHHh-hcCCHHHHHHHHHHHHH
Q 001541 644 GLKNI-HLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 644 ~~~~v-~~fsw~~~a~~~l~~~~ 665 (1057)
+++.+ ++|||+.++++|+++|+
T Consensus 341 ~~~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 341 ARERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred HHHHHHHhCCHHHHHHHHHHHhC
Confidence 99998 58999999999999874
No 31
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=4.7e-33 Score=324.01 Aligned_cols=291 Identities=16% Similarity=0.104 Sum_probs=213.3
Q ss_pred CcceEEEEcCCCchHHHHHHHhcCCCCEEEE-ecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEe
Q 001541 305 VWPVAIHGHYADAGDSAALLSGALNVPMLFT-GHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 383 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t-~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~ 383 (1057)
.+|||||+|...+...+.+.+...++|++++ .|+..+...... +...|...++- ..+...+| +++
T Consensus 279 ~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~~~~r~----------~~~e~~~~~~a---~~i~~~sd-~v~ 344 (578)
T PRK15490 279 RKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPVVRKRL----------FKPEYEPLYQA---LAVVPGVD-FMS 344 (578)
T ss_pred cCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCcchhhH----------HHHHHHHhhhh---ceeEecch-hhh
Confidence 6799999998777677777777789999654 666322211000 00011101000 01133334 445
Q ss_pred cCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchH
Q 001541 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 463 (1057)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1057)
.+....+.+...+ |.+..++.|||||||...|.+..... ...+
T Consensus 345 ~s~~v~~~l~~~l----------------------gip~~KI~VIyNGVD~~rf~p~~~~~---------------~~~r 387 (578)
T PRK15490 345 NNHCVTRHYADWL----------------------KLEAKHFQVVYNGVLPPSTEPSSEVP---------------HKIW 387 (578)
T ss_pred ccHHHHHHHHHHh----------------------CCCHHHEEEEeCCcchhhcCccchhh---------------HHHH
Confidence 5554444432222 22334999999999999887632110 0011
Q ss_pred HHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCC
Q 001541 464 SEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDL 542 (1057)
Q Consensus 464 ~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l 542 (1057)
.... ....++.++|+++||+.+.||...+|+|+.++... .+++.| |+|+|+. ..++.+++.++++
T Consensus 388 ~~~~-~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~--~pdirLvIVGdG~~-----------~eeLk~la~elgL 453 (578)
T PRK15490 388 QQFT-QKTQDADTTIGGVFRFVGDKNPFAWIDFAARYLQH--HPATRFVLVGDGDL-----------RAEAQKRAEQLGI 453 (578)
T ss_pred HHhh-hccCCCCcEEEEEEEEehhcCHHHHHHHHHHHHhH--CCCeEEEEEeCchh-----------HHHHHHHHHHcCC
Confidence 1111 11235668999999999999999999999988643 356664 8898764 4678889999999
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHH
Q 001541 543 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQS 622 (1057)
Q Consensus 543 ~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~ 622 (1057)
.++|.|+|+ .++++.+|+.| |+||+||.+||||++++||||||+|||+|+.||..|+|.++.+|++|++.|+++
T Consensus 454 ~d~V~FlG~--~~Dv~~~LaaA----DVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~a 527 (578)
T PRK15490 454 LERILFVGA--SRDVGYWLQKM----NVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFILDDAQTVN 527 (578)
T ss_pred CCcEEECCC--hhhHHHHHHhC----CEEEEcccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEECCCChhh
Confidence 999999998 57999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH---HHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHc
Q 001541 623 VADAL---LKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAG 666 (1057)
Q Consensus 623 la~aI---~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~~ 666 (1057)
+++++ .++.........+++++++++ ++|||+.++++|.++|..
T Consensus 528 La~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 528 LDQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 98887 444555555667899999999 699999999999999975
No 32
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=2.4e-32 Score=326.82 Aligned_cols=293 Identities=21% Similarity=0.270 Sum_probs=235.1
Q ss_pred CcceEEEEcCC-CchHHHHHHHhcCCCCEEEEecCCchhhHH-HHHHhhhcchHHHH-HHHHHHHHHHHHHHHhhcCCEE
Q 001541 305 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLE-QLLKQARLSRDEIN-ATYKIMRRIEAEELSLDASEIV 381 (1057)
Q Consensus 305 ~~pDvIh~h~~-~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~-~l~~~g~~~~~~~~-~~yk~~~ri~~E~~~l~~ad~V 381 (1057)
.++||||+|.. .++.++.++++..++|+|+|.|+....... .+...... ...+. .+.++++. .++.+++.||.|
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~-~~~~~~~~~~~~~~--l~~~~~~~ad~I 248 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWE-MSYFRRLWIRFFES--LGRLAYQAADRI 248 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccc-hHHHHHHHHHHHHH--HHHHHHHhCCEE
Confidence 46899999975 567888888899999999999998653321 11111100 11111 12223333 367789999999
Q ss_pred EecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCc
Q 001541 382 ITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPP 461 (1057)
Q Consensus 382 i~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~ 461 (1057)
++.|+...+.+... +. +..++.|||||+|.+.|.+....
T Consensus 249 i~~s~~~~~~~~~~--g~---------------------~~~ki~vIpNgid~~~f~~~~~~------------------ 287 (475)
T cd03813 249 TTLYEGNRERQIED--GA---------------------DPEKIRVIPNGIDPERFAPARRA------------------ 287 (475)
T ss_pred EecCHHHHHHHHHc--CC---------------------CHHHeEEeCCCcCHHHcCCcccc------------------
Confidence 99998866554321 22 22389999999999988753210
Q ss_pred hHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHc
Q 001541 462 IWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKY 540 (1057)
Q Consensus 462 ~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~ 540 (1057)
...++.++|+++||+.+.||++.+++|+..+.+. .+++.+ |+|+++.. ..+..++.++++++
T Consensus 288 --------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~p~~~l~IvG~g~~~-------~~~~~e~~~li~~l 350 (475)
T cd03813 288 --------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKK--IPDAEGWVIGPTDED-------PEYAEECRELVESL 350 (475)
T ss_pred --------ccCCCCcEEEEEeccccccCHHHHHHHHHHHHHh--CCCeEEEEECCCCcC-------hHHHHHHHHHHHHh
Confidence 0135678999999999999999999999998753 456665 78887531 34678899999999
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhc------CCceEE
Q 001541 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV------LDNGLL 614 (1057)
Q Consensus 541 ~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~------~~~Gll 614 (1057)
++.++|.|+| .+++.++|+.| |++|+||..|+||++++||||||+|||+|+.||..|++.+ +.+|++
T Consensus 351 ~l~~~V~f~G---~~~v~~~l~~a----Dv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~l 423 (475)
T cd03813 351 GLEDNVKFTG---FQNVKEYLPKL----DVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEV 423 (475)
T ss_pred CCCCeEEEcC---CccHHHHHHhC----CEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEE
Confidence 9999999999 57999999999 9999999999999999999999999999999999999988 568999
Q ss_pred eCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 001541 615 VDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 615 v~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~ 665 (1057)
++|.|+++++++|.+++++++.++++++++++.+ +.|+|+.++++|.++|+
T Consensus 424 v~~~d~~~la~ai~~ll~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 424 VPPADPEALARAILRLLKDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred ECCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999 68999999999999884
No 33
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=100.00 E-value=5.6e-33 Score=320.49 Aligned_cols=278 Identities=27% Similarity=0.378 Sum_probs=226.3
Q ss_pred CcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEec
Q 001541 305 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 384 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~ 384 (1057)
.+||+||+|....+..+..+++.+++|+|++.|+............ . .++..+. .+...++.+|.|+++
T Consensus 81 ~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~---~------~~~~~~~--~~~~~~~~~d~ii~~ 149 (367)
T cd05844 81 HRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLALLLR---S------RWALYAR--RRRRLARRAALFIAV 149 (367)
T ss_pred hCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccchhhcc---c------chhHHHH--HHHHHHHhcCEEEEC
Confidence 5799999998777788888888899999999997543221110000 0 0111222 245678999999999
Q ss_pred CHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHH
Q 001541 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 464 (1057)
Q Consensus 385 S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1057)
|+...+.+... +. +.+++.++|||+|.+.|.+...
T Consensus 150 s~~~~~~~~~~--~~---------------------~~~~i~vi~~g~d~~~~~~~~~---------------------- 184 (367)
T cd05844 150 SQFIRDRLLAL--GF---------------------PPEKVHVHPIGVDTAKFTPATP---------------------- 184 (367)
T ss_pred CHHHHHHHHHc--CC---------------------CHHHeEEecCCCCHHhcCCCCC----------------------
Confidence 99877665432 22 2238999999999988764311
Q ss_pred HHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCC
Q 001541 465 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 543 (1057)
Q Consensus 465 ~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~ 543 (1057)
..+.+.|+++|++.+.||++.+++|+..+.+. .+++.| ++|+++. .+++.++++.+++.
T Consensus 185 -------~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~--~~~~~l~ivG~g~~-----------~~~~~~~~~~~~~~ 244 (367)
T cd05844 185 -------ARRPPRILFVGRFVEKKGPLLLLEAFARLARR--VPEVRLVIIGDGPL-----------LAALEALARALGLG 244 (367)
T ss_pred -------CCCCcEEEEEEeeccccChHHHHHHHHHHHHh--CCCeEEEEEeCchH-----------HHHHHHHHHHcCCC
Confidence 23467899999999999999999999998643 345564 7787653 46688888998998
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCC------CCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCC
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF------IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDP 617 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~------~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p 617 (1057)
++|.|.|.++.+++..+|+.| |++|+||. .|+||++++||||||+|||+++.||..|++.++.+|+++++
T Consensus 245 ~~v~~~g~~~~~~l~~~~~~a----d~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~ 320 (367)
T cd05844 245 GRVTFLGAQPHAEVRELMRRA----RIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPE 320 (367)
T ss_pred CeEEECCCCCHHHHHHHHHhC----CEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECC
Confidence 999999999999999999999 99999996 59999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHH
Q 001541 618 HDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLS 662 (1057)
Q Consensus 618 ~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~ 662 (1057)
.|+++++++|.+++++++++++++.++++.+ ++|||+.+++++.+
T Consensus 321 ~d~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 321 GDVAALAAALGRLLADPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 9999999999999999999999999999999 69999999998875
No 34
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=100.00 E-value=1.7e-33 Score=326.83 Aligned_cols=284 Identities=18% Similarity=0.215 Sum_probs=209.8
Q ss_pred CcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEec
Q 001541 305 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 384 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~ 384 (1057)
.+|||||+|++.+..+ ..+.+..++|+|++.|+...... ...+++. +..+..+|.+++.
T Consensus 84 ~~~Dvv~~h~~~~~~~-~~~~~~~~~~~i~~~H~~~~~~~--------------~~~~~~~------~~~~~~~d~~i~~ 142 (372)
T cd03792 84 LDADVVVIHDPQPLAL-PLFKKKRGRPWIWRCHIDLSSPN--------------RRVWDFL------QPYIEDYDAAVFH 142 (372)
T ss_pred CCCCEEEECCCCchhH-HHhhhcCCCeEEEEeeeecCCCc--------------HHHHHHH------HHHHHhCCEEeec
Confidence 5799999998764332 22333448999999998643211 0111222 2346789999888
Q ss_pred CHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCch-H
Q 001541 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPI-W 463 (1057)
Q Consensus 385 S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~-~ 463 (1057)
|...... . + ...++ +||||+|........ ..+.. .
T Consensus 143 ~~~~~~~------~----------------~-----~~~~~-vipngvd~~~~~~~~----------------~~~~~~~ 178 (372)
T cd03792 143 LPEYVPP------Q----------------V-----PPRKV-IIPPSIDPLSGKNRE----------------LSPADIE 178 (372)
T ss_pred HHHhcCC------C----------------C-----CCceE-EeCCCCCCCccccCC----------------CCHHHHH
Confidence 8432110 1 1 11144 999999975321100 01111 1
Q ss_pred HHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHcCC
Q 001541 464 SEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDL 542 (1057)
Q Consensus 464 ~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l 542 (1057)
..+.++...+++++|+++||+++.||++.+++|+..+.+.. +++. +++|+++..+.. ....+.++.+..++
T Consensus 179 ~~~~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~--~~~~l~i~G~g~~~~~~------~~~~~~~~~~~~~~ 250 (372)
T cd03792 179 YILEKYGIDPERPYITQVSRFDPWKDPFGVIDAYRKVKERV--PDPQLVLVGSGATDDPE------GWIVYEEVLEYAEG 250 (372)
T ss_pred HHHHHhCCCCCCcEEEEEeccccccCcHHHHHHHHHHHhhC--CCCEEEEEeCCCCCCch------hHHHHHHHHHHhCC
Confidence 23344555678899999999999999999999999986533 3444 478887653211 12223444445677
Q ss_pred CCCEEeCCCC--CCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCH
Q 001541 543 YGQVAYPKHH--KQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ 620 (1057)
Q Consensus 543 ~~~V~f~g~v--~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~ 620 (1057)
.++|.|.|.. +.+++..+|+.| |+|++||..||||++++||||||+|||+|+.||..+++.++.+|++++ +.
T Consensus 251 ~~~v~~~~~~~~~~~~~~~~~~~a----d~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~ 324 (372)
T cd03792 251 DPDIHVLTLPPVSDLEVNALQRAS----TVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TV 324 (372)
T ss_pred CCCeEEEecCCCCHHHHHHHHHhC----eEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--Cc
Confidence 7889998876 788999999999 999999999999999999999999999999999999999999999997 56
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 001541 621 QSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGC 667 (1057)
Q Consensus 621 ~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~~~ 667 (1057)
++++.+|.+++++++++++|++++++.+ ++|||+..+++|+++|+.+
T Consensus 325 ~~~a~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~ 372 (372)
T cd03792 325 EEAAVRILYLLRDPELRRKMGANAREHVRENFLITRHLKDYLYLISKL 372 (372)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHhC
Confidence 7899999999999999999999999998 6999999999999999853
No 35
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=3.6e-32 Score=311.78 Aligned_cols=342 Identities=25% Similarity=0.314 Sum_probs=257.4
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCccccc
Q 001541 189 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYI 268 (1057)
Q Consensus 189 d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l 268 (1057)
..||+++++.+|+++|.++| |+|.+++.... .. . ..+..++.++.++.....
T Consensus 8 ~~gG~e~~~~~l~~~L~~~g--~~v~v~~~~~~--~~-----~----------------~~~~~~~~~~~~~~~~~~--- 59 (355)
T cd03819 8 ESGGVERGTLELARALVERG--HRSLVASAGGR--LV-----A----------------ELEAEGSRHIKLPFISKN--- 59 (355)
T ss_pred ccCcHHHHHHHHHHHHHHcC--CEEEEEcCCCc--hH-----H----------------HHHhcCCeEEEccccccc---
Confidence 35999999999999999999 99999976421 00 0 011236677776653321
Q ss_pred ccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHH
Q 001541 269 AKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLL 348 (1057)
Q Consensus 269 ~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~ 348 (1057)
.+..+ ..+..+.+.+.+ .+||+||+|+......+.++++..++|+|++.|+......
T Consensus 60 ----~~~~~--------~~~~~l~~~~~~-------~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~---- 116 (355)
T cd03819 60 ----PLRIL--------LNVARLRRLIRE-------EKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF---- 116 (355)
T ss_pred ----hhhhH--------HHHHHHHHHHHH-------cCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH----
Confidence 11111 111122222332 5799999999877777777778889999999998754221
Q ss_pred HhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEe
Q 001541 349 KQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 428 (1057)
Q Consensus 349 ~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VI 428 (1057)
+ ....+..+|.++++|+...+.+...+ |.+..++.+|
T Consensus 117 ---------------~------~~~~~~~~~~vi~~s~~~~~~~~~~~----------------------~~~~~k~~~i 153 (355)
T cd03819 117 ---------------R------YNAIMARGDRVIAVSNFIADHIRENY----------------------GVDPDRIRVI 153 (355)
T ss_pred ---------------H------HHHHHHhcCEEEEeCHHHHHHHHHhc----------------------CCChhhEEEe
Confidence 0 12346789999999988766654322 2233489999
Q ss_pred CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHH-HHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC
Q 001541 429 PPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS-EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA 507 (1057)
Q Consensus 429 pnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~ 507 (1057)
|||+|...|.+.... ..... .+.++...++.++|+++||+.+.||++.+++|+..+.+. .+
T Consensus 154 ~ngi~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~--~~ 215 (355)
T cd03819 154 PRGVDLDRFDPGAVP----------------PERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALARLKKD--DP 215 (355)
T ss_pred cCCccccccCccccc----------------hHHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHHHHhc--CC
Confidence 999999887643211 11111 233334456778999999999999999999999999653 34
Q ss_pred cEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcC-CCCCCCHHHH
Q 001541 508 NLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPA-FIEPFGLTLI 585 (1057)
Q Consensus 508 ~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps-~~Egfgl~~l 585 (1057)
++.+ |+|+++..+ .+...+.+.+.++++.++|.|+|+ .+++..+|+.| |++|+|| ..|+||++++
T Consensus 216 ~~~l~ivG~~~~~~-------~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~l~~a----d~~i~ps~~~e~~~~~l~ 282 (355)
T cd03819 216 DVHLLIVGDAQGRR-------FYYAELLELIKRLGLQDRVTFVGH--CSDMPAAYALA----DIVVSASTEPEAFGRTAV 282 (355)
T ss_pred CeEEEEEECCcccc-------hHHHHHHHHHHHcCCcceEEEcCC--cccHHHHHHhC----CEEEecCCCCCCCchHHH
Confidence 5665 778876532 235566778888899889999999 78999999999 9999999 8999999999
Q ss_pred HHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHh-hcCCHHH
Q 001541 586 EAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNI-HLFSWPE 655 (1057)
Q Consensus 586 EAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v-~~fsw~~ 655 (1057)
||||||+|||+++.||..|++.++.+|+++++.|+++++++|..++. +++++.++++++++.+ ++|||+.
T Consensus 283 EA~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~f~~~~ 354 (355)
T cd03819 283 EAQAMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVETLFSYDR 354 (355)
T ss_pred HHHhcCCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 99999999999999999999999889999999999999999976655 8999999999999999 6999975
No 36
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=6.2e-32 Score=308.90 Aligned_cols=362 Identities=23% Similarity=0.263 Sum_probs=261.6
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcccc
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
||++|+.... |..||.+.++..|+++|.+.| |+|++++......... +
T Consensus 1 kIl~i~~~~~-----------p~~~G~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~~~--~----------------- 48 (364)
T cd03814 1 RIAIVTDTFL-----------PQVNGVVRTLQRLVEHLRARG--HEVLVIAPGPFRESEG--P----------------- 48 (364)
T ss_pred CeEEEecccC-----------ccccceehHHHHHHHHHHHCC--CEEEEEeCCchhhccC--C-----------------
Confidence 6899985443 567999999999999999999 9999998764211100 0
Q ss_pred ccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC-CchHHHHHHH
Q 001541 247 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA-DAGDSAALLS 325 (1057)
Q Consensus 247 ~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~-~~~~~a~~l~ 325 (1057)
.....+...+.... ....+... ....+ .+.+. ..+||+||+|.. ..+..+..++
T Consensus 49 ----~~~~~~~~~~~~~~----~~~~~~~~---~~~~~-------~~~~~-------~~~pdii~~~~~~~~~~~~~~~~ 103 (364)
T cd03814 49 ----ARVVPVPSVPLPGY----PEIRLALP---PRRRV-------RRLLD-------AFAPDVVHIATPGPLGLAALRAA 103 (364)
T ss_pred ----CCceeecccccCcc----cceEeccc---chhhH-------HHHHH-------hcCCCEEEEeccchhhHHHHHHH
Confidence 01222222221111 00000000 00011 11111 157999999875 3455666777
Q ss_pred hcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHH
Q 001541 326 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1057)
Q Consensus 326 ~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~ 405 (1057)
+..++|++++.|+.+........ .. ...++... .++..++.+|.+++.|+...+.+...+
T Consensus 104 ~~~~~~~i~~~~~~~~~~~~~~~-----~~----~~~~~~~~--~~~~~~~~~d~i~~~s~~~~~~~~~~~--------- 163 (364)
T cd03814 104 RRLGIPVVTSYHTDFPEYLRYYG-----LG----PLSWLAWA--YLRWFHNRADRVLVPSPSLADELRARG--------- 163 (364)
T ss_pred HHcCCCEEEEEecChHHHhhhcc-----cc----hHhHhhHH--HHHHHHHhCCEEEeCCHHHHHHHhccC---------
Confidence 78899999999987653322110 00 01111112 245678899999999998766432221
Q ss_pred HHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCC
Q 001541 406 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 485 (1057)
Q Consensus 406 ~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~ 485 (1057)
..++.++|+|+|...|.+..... .....+. .++++.|+++||+.
T Consensus 164 ----------------~~~~~~~~~g~~~~~~~~~~~~~-------------------~~~~~~~-~~~~~~i~~~G~~~ 207 (364)
T cd03814 164 ----------------FRRVRLWPRGVDTELFHPRRRDE-------------------ALRARLG-PPDRPVLLYVGRLA 207 (364)
T ss_pred ----------------CCceeecCCCccccccCcccccH-------------------HHHHHhC-CCCCeEEEEEeccc
Confidence 12789999999998886532110 1111222 45678899999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHh
Q 001541 486 PKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLA 564 (1057)
Q Consensus 486 ~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~A 564 (1057)
+.||++.+++++..+.+. +++.+ ++|++++.. .+. +...+|.|.|+++.+++..+|+.|
T Consensus 208 ~~k~~~~~i~~~~~l~~~---~~~~l~i~G~~~~~~-----------~~~------~~~~~v~~~g~~~~~~~~~~~~~~ 267 (364)
T cd03814 208 PEKNLEALLDADLPLRRR---PPVRLVIVGDGPARA-----------RLE------ARYPNVHFLGFLDGEELAAAYASA 267 (364)
T ss_pred cccCHHHHHHHHHHhhhc---CCceEEEEeCCchHH-----------HHh------ccCCcEEEEeccCHHHHHHHHHhC
Confidence 999999999999999753 45554 788776421 111 456789999999999999999999
Q ss_pred hcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Q 001541 565 AKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNG 644 (1057)
Q Consensus 565 a~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~ 644 (1057)
|++|+|+..|+||++++||||||+|||+++.|+..+++.++.+|+++++.|.++++++|.+++.+++.+.++++++
T Consensus 268 ----d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~ 343 (364)
T cd03814 268 ----DVFVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADPELRRRMAARA 343 (364)
T ss_pred ----CEEEECcccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999899999999999999999999999999999999999
Q ss_pred HHHhhcCCHHHHHHHHHHHHH
Q 001541 645 LKNIHLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 645 ~~~v~~fsw~~~a~~~l~~~~ 665 (1057)
++.+++|+|+.++++++++|+
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~ 364 (364)
T cd03814 344 RAEAERRSWEAFLDNLLEAYR 364 (364)
T ss_pred HHHHhhcCHHHHHHHHHHhhC
Confidence 999989999999999998873
No 37
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=9e-32 Score=308.27 Aligned_cols=352 Identities=20% Similarity=0.234 Sum_probs=257.1
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcccc
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
||++|+.... |+.||.++++.+|+++|.+.| |+|+|++........ .
T Consensus 1 kil~i~~~~~-----------p~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~-------~------------- 47 (357)
T cd03795 1 RVLHVGKFYP-----------PDRGGIEQVIRDLAEGLAARG--IEVAVLCASPEPKGR-------D------------- 47 (357)
T ss_pred CeeEecCCCC-----------CCCCcHHHHHHHHHHHHHhCC--CceEEEecCCCCcch-------h-------------
Confidence 5888885443 679999999999999999999 999999875421110 0
Q ss_pred ccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHh
Q 001541 247 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSG 326 (1057)
Q Consensus 247 ~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~ 326 (1057)
....+..+++++.... ....+... .++..+. + ...+||+||+|+............
T Consensus 48 --~~~~~~~~~~~~~~~~------~~~~~~~~----~~~~~~~-----~-------~~~~~Dii~~~~~~~~~~~~~~~~ 103 (357)
T cd03795 48 --EERNGHRVIRAPSLLN------VASTPFSP----SFFKQLK-----K-------LAKKADVIHLHFPNPLADLALLLL 103 (357)
T ss_pred --hhccCceEEEeecccc------cccccccH----HHHHHHH-----h-------cCCCCCEEEEecCcchHHHHHHHh
Confidence 0113445666553211 00111111 1111111 0 125799999998654333333333
Q ss_pred cCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHH
Q 001541 327 ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK 406 (1057)
Q Consensus 327 ~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~ 406 (1057)
..++|++++.|+...... ..+++... .++..++.||.|+++|+...+.....+..
T Consensus 104 ~~~~~~i~~~h~~~~~~~---------------~~~~~~~~--~~~~~~~~~d~vi~~s~~~~~~~~~~~~~-------- 158 (357)
T cd03795 104 PRKKPVVVHWHSDIVKQK---------------LLLKLYRP--LQRRFLRRADAIVATSPNYAETSPVLRRF-------- 158 (357)
T ss_pred ccCceEEEEEcChhhccc---------------hhhhhhhH--HHHHHHHhcCEEEeCcHHHHHHHHHhcCC--------
Confidence 368999999997432110 01112222 24567999999999999876654332211
Q ss_pred HHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCC
Q 001541 407 LRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDP 486 (1057)
Q Consensus 407 l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~ 486 (1057)
..++.+||||+|...+.+..... ........+.++|+++||+.+
T Consensus 159 ---------------~~~~~~i~~gi~~~~~~~~~~~~---------------------~~~~~~~~~~~~i~~~G~~~~ 202 (357)
T cd03795 159 ---------------RDKVRVIPLGLDPARYPRPDALE---------------------EAIWRRAAGRPFFLFVGRLVY 202 (357)
T ss_pred ---------------ccceEEecCCCChhhcCCcchhh---------------------hHhhcCCCCCcEEEEeccccc
Confidence 12899999999998776432100 011222456789999999999
Q ss_pred CCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhh
Q 001541 487 KKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAA 565 (1057)
Q Consensus 487 ~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa 565 (1057)
.||++.+++|+.++. ++. +|+|+++. ...+.+++.++++..+|.|+|+++.+++..+|+.|
T Consensus 203 ~K~~~~li~a~~~l~------~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~a- 264 (357)
T cd03795 203 YKGLDVLLEAAAALP------DAPLVIVGEGPL-----------EAELEALAAALGLLDRVRFLGRLDDEEKAALLAAC- 264 (357)
T ss_pred ccCHHHHHHHHHhcc------CcEEEEEeCChh-----------HHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhC-
Confidence 999999999999984 444 47787764 35567777888999999999999999999999999
Q ss_pred cCCcEEEEcCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhhc-CCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHH
Q 001541 566 KTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV-LDNGLLVDPHDQQSVADALLKLVADKQLWARCRQ 642 (1057)
Q Consensus 566 ~~~dv~v~ps~--~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~-~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~ 642 (1057)
|++++||. .|+||++++|||+||+|||+|+.|+..+.+.. +.+|++++++|+++++++|.+++++++.++++++
T Consensus 265 ---d~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~~~~~~~~~ 341 (357)
T cd03795 265 ---DVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDPELRERLGE 341 (357)
T ss_pred ---CEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCHHHHHHHHH
Confidence 99999985 69999999999999999999999999998886 8999999999999999999999999999999999
Q ss_pred HHHHHh-hcCCHHHHH
Q 001541 643 NGLKNI-HLFSWPEHC 657 (1057)
Q Consensus 643 ~~~~~v-~~fsw~~~a 657 (1057)
++++.+ ++|||+.++
T Consensus 342 ~~~~~~~~~~s~~~~~ 357 (357)
T cd03795 342 AARERAEEEFTADRMV 357 (357)
T ss_pred HHHHHHHHhcchHhhC
Confidence 999999 699998763
No 38
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=100.00 E-value=7.6e-32 Score=317.22 Aligned_cols=378 Identities=14% Similarity=0.100 Sum_probs=248.9
Q ss_pred CcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCccccccc
Q 001541 191 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAK 270 (1057)
Q Consensus 191 GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l~k 270 (1057)
+|...++.++|++|++.| |+|+|++.....+. . +.....|+.++.++..+....
T Consensus 14 ~~~~~R~~~~a~~L~~~G--~~V~ii~~~~~~~~--------~-------------~~~~~~~v~~~~~~~~~~~~~--- 67 (415)
T cd03816 14 IGRSPRMQYHALSLAKHG--WKVDLVGYLETPPH--------D-------------EILSNPNITIHPLPPPPQRLN--- 67 (415)
T ss_pred cCCCHHHHHHHHHHHhcC--ceEEEEEecCCCCC--------H-------------HHhcCCCEEEEECCCCccccc---
Confidence 466677789999999999 99999987531111 0 011235889988876441000
Q ss_pred ccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCc---hHHHHHHHhcCCCCEEEEecCCchhhHHHH
Q 001541 271 ELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADA---GDSAALLSGALNVPMLFTGHSLGRDKLEQL 347 (1057)
Q Consensus 271 ~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~---~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l 347 (1057)
..+++..+...++..+..+.+.+.. ..+||+||+|.... ..++.++++..++|+|+|.|+.+....
T Consensus 68 --~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~--- 136 (415)
T cd03816 68 --KLPFLLFAPLKVLWQFFSLLWLLYK------LRPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTIL--- 136 (415)
T ss_pred --cchHHHHHHHHHHHHHHHHHHHHHh------cCCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHH---
Confidence 0111111111222112222111111 14699999987432 334555677789999999998753211
Q ss_pred HHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEE
Q 001541 348 LKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAI 427 (1057)
Q Consensus 348 ~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~V 427 (1057)
..+... .....++.+++ |++.++.||.||++|+...+.+.. + |.+..++.|
T Consensus 137 -~~~~~~---~~~~~~~~~~~--e~~~~~~ad~ii~vS~~~~~~l~~-~----------------------~~~~~ki~v 187 (415)
T cd03816 137 -ALKLGE---NHPLVRLAKWY--EKLFGRLADYNLCVTKAMKEDLQQ-F----------------------NNWKIRATV 187 (415)
T ss_pred -hcccCC---CCHHHHHHHHH--HHHHhhcCCEeeecCHHHHHHHHh-h----------------------hccCCCeee
Confidence 111100 11122344443 778899999999999987776543 2 223348999
Q ss_pred eCCCCCCCCcCCCCCCCCCC-CCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhccccc--
Q 001541 428 IPPGMEFHHIVPQDGDMDGE-TEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLR-- 504 (1057)
Q Consensus 428 IpnGiD~~~f~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~-- 504 (1057)
||||. ...|.|........ ....... ..+............++..+++++||+.+.||++.+++|+..+....
T Consensus 188 I~Ng~-~~~f~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~ 263 (415)
T cd03816 188 LYDRP-PEQFRPLPLEEKHELFLKLAKT---FLTRELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAAT 263 (415)
T ss_pred cCCCC-HHHceeCcHHHHHHHHHhcccc---ccccccccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhhcc
Confidence 99994 45565432110000 0000000 00000000000011234567889999999999999999999986421
Q ss_pred --CCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcC---CCC
Q 001541 505 --ELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPA---FIE 578 (1057)
Q Consensus 505 --~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps---~~E 578 (1057)
..+++.+ |+|+|+. ...+.++++++++.+.+.|.|+++.++++.+|+.| |++|.|+ ..|
T Consensus 264 ~~~~~~i~l~ivG~G~~-----------~~~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~a----Dv~v~~~~~~~~~ 328 (415)
T cd03816 264 GPKLPKLLCIITGKGPL-----------KEKYLERIKELKLKKVTIRTPWLSAEDYPKLLASA----DLGVSLHTSSSGL 328 (415)
T ss_pred cccCCCEEEEEEecCcc-----------HHHHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHhC----CEEEEcccccccc
Confidence 2356775 7898875 56788889999997767777899999999999999 9999753 357
Q ss_pred CCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHhhcCCHHH
Q 001541 579 PFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVAD---KQLWARCRQNGLKNIHLFSWPE 655 (1057)
Q Consensus 579 gfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d---~~~~~~~~~~~~~~v~~fsw~~ 655 (1057)
+||++++||||||+|||+|+.||..|+++++.+|++++ |+++++++|.++++| ++++++|++++++.. .++|..
T Consensus 329 ~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~-~~~~~~ 405 (415)
T cd03816 329 DLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES-ELRWDE 405 (415)
T ss_pred CCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh-hcCHHH
Confidence 89999999999999999999999999999999999995 999999999999999 999999999999887 555554
Q ss_pred H
Q 001541 656 H 656 (1057)
Q Consensus 656 ~ 656 (1057)
-
T Consensus 406 ~ 406 (415)
T cd03816 406 N 406 (415)
T ss_pred H
Confidence 3
No 39
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=100.00 E-value=7.7e-32 Score=306.52 Aligned_cols=331 Identities=18% Similarity=0.186 Sum_probs=236.3
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccc
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 245 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1057)
|||++|+.... + .+ +|..||+++++.+|+++|.+.| |+|++++........
T Consensus 1 MkI~~i~~~~~----~--~~-~~~~GG~~~~~~~l~~~L~~~g--~~V~v~~~~~~~~~~-------------------- 51 (335)
T cd03802 1 MRIALVAPPRE----P--VP-PPAYGGTERVVAALTEGLVARG--HEVTLFASGDSKTAA-------------------- 51 (335)
T ss_pred CeEEEEcCCcc----c--CC-CcccCcHHHHHHHHHHHHHhcC--ceEEEEecCCCCccc--------------------
Confidence 89999986443 0 01 2578999999999999999999 999999875421100
Q ss_pred cccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHH
Q 001541 246 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 325 (1057)
Q Consensus 246 ~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~ 325 (1057)
..+....... .... . ............+.+.+.+ .+|||||+|.+..... ++
T Consensus 52 ---------~~~~~~~~~~--~~~~---~----~~~~~~~~~~~~~~~~~~~-------~~~Divh~~~~~~~~~---~~ 103 (335)
T cd03802 52 ---------PLVPVVPEPL--RLDA---P----GRDRAEAEALALAERALAA-------GDFDIVHNHSLHLPLP---FA 103 (335)
T ss_pred ---------ceeeccCCCc--cccc---c----hhhHhhHHHHHHHHHHHhc-------CCCCEEEecCcccchh---hh
Confidence 0000000000 0000 0 0000111111222222222 5699999998765544 56
Q ss_pred hcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHH
Q 001541 326 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1057)
Q Consensus 326 ~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~ 405 (1057)
+..++|+|+|.|+........ ........+.++++|+...+.....
T Consensus 104 ~~~~~~~v~~~h~~~~~~~~~------------------------~~~~~~~~~~~~~~s~~~~~~~~~~---------- 149 (335)
T cd03802 104 RPLPVPVVTTLHGPPDPELLK------------------------LYYAARPDVPFVSISDAQRRPWPPL---------- 149 (335)
T ss_pred cccCCCEEEEecCCCCcccch------------------------HHHhhCcCCeEEEecHHHHhhcccc----------
Confidence 678999999999886533110 0124567788999988765542111
Q ss_pred HHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCC
Q 001541 406 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 485 (1057)
Q Consensus 406 ~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~ 485 (1057)
.++.+||||+|.+.|.+. ...++.|+++||+.
T Consensus 150 -----------------~~~~vi~ngvd~~~~~~~-------------------------------~~~~~~i~~~Gr~~ 181 (335)
T cd03802 150 -----------------PWVATVHNGIDLDDYPFR-------------------------------GPKGDYLLFLGRIS 181 (335)
T ss_pred -----------------cccEEecCCcChhhCCCC-------------------------------CCCCCEEEEEEeec
Confidence 278999999999888641 13467899999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHcC-CCCCEEeCCCCCCCcHHHHHHH
Q 001541 486 PKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYD-LYGQVAYPKHHKQSDVPEIYRL 563 (1057)
Q Consensus 486 ~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~-l~~~V~f~g~v~~~dl~~ly~~ 563 (1057)
+.||++.+++|+.+. ++. +++|.++.. ..+........ +.++|.|+|+++.+++..+|+.
T Consensus 182 ~~Kg~~~li~~~~~~-------~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~ 243 (335)
T cd03802 182 PEKGPHLAIRAARRA-------GIPLKLAGPVSDP-----------DYFYREIAPELLDGPDIEYLGEVGGAEKAELLGN 243 (335)
T ss_pred cccCHHHHHHHHHhc-------CCeEEEEeCCCCH-----------HHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHh
Confidence 999999999998754 233 478887642 22233333332 5678999999999999999999
Q ss_pred hhcCCcEEEEcCC-CCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHH
Q 001541 564 AAKTKGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQ 642 (1057)
Q Consensus 564 Aa~~~dv~v~ps~-~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~ 642 (1057)
| |++|+||. .|+||++++||||||+|||+++.||..|++.++.+|+++++ +++++++|.+++..+ .+
T Consensus 244 ~----d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~------~~ 311 (335)
T cd03802 244 A----RALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLD------RA 311 (335)
T ss_pred C----cEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccH------HH
Confidence 9 99999996 59999999999999999999999999999999889999985 999999999987643 24
Q ss_pred HHHHHh-hcCCHHHHHHHHHHHHH
Q 001541 643 NGLKNI-HLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 643 ~~~~~v-~~fsw~~~a~~~l~~~~ 665 (1057)
++++.+ ++|||+..+++|+++|+
T Consensus 312 ~~~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 312 ACRRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhC
Confidence 556666 79999999999999884
No 40
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=100.00 E-value=3.3e-33 Score=299.27 Aligned_cols=366 Identities=18% Similarity=0.234 Sum_probs=267.5
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccc
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 245 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1057)
++|++||.+.+ |.+||.+.+++.|++.|-++| |.|.++|..+.+- .+..++
T Consensus 1 ~~i~mVsdff~-----------P~~ggveshiy~lSq~li~lg--hkVvvithayg~r-------~giryl--------- 51 (426)
T KOG1111|consen 1 SRILMVSDFFY-----------PSTGGVESHIYALSQCLIRLG--HKVVVITHAYGNR-------VGIRYL--------- 51 (426)
T ss_pred CcceeeCcccc-----------cCCCChhhhHHHhhcchhhcC--CeEEEEeccccCc-------cceeee---------
Confidence 47999999998 899999999999999999999 9999999876321 233333
Q ss_pred cccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHH--HHH
Q 001541 246 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDS--AAL 323 (1057)
Q Consensus 246 ~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~--a~~ 323 (1057)
++|..++.+|+.. ..++..+|-+.....-+...+.+ .+..|||+|.+++... +.+
T Consensus 52 -----t~glkVyylp~~v----~~n~tT~ptv~~~~Pllr~i~lr--------------E~I~ivhghs~fS~lahe~l~ 108 (426)
T KOG1111|consen 52 -----TNGLKVYYLPAVV----GYNQTTFPTVFSDFPLLRPILLR--------------ERIEIVHGHSPFSYLAHEALM 108 (426)
T ss_pred -----cCCceEEEEeeee----eecccchhhhhccCcccchhhhh--------------hceEEEecCChHHHHHHHHHH
Confidence 2467788777632 22233333322221111111111 4689999999754433 566
Q ss_pred HHhcCCCCEEEEecCCchhh-HHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChH
Q 001541 324 LSGALNVPMLFTGHSLGRDK-LEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPV 402 (1057)
Q Consensus 324 l~~~~~iP~V~t~H~l~~~~-~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~ 402 (1057)
.++.+|.++|+|-|+++-.. .... ..+. .-..++...|.+||+|..-.+- --+.....|
T Consensus 109 hartMGlktVfTdHSlfGfad~~si---------~~n~---------ll~~sL~~id~~IcVshtsken-tvlr~~L~p- 168 (426)
T KOG1111|consen 109 HARTMGLKTVFTDHSLFGFADIGSI---------LTNK---------LLPLSLANIDRIICVSHTSKEN-TVLRGALAP- 168 (426)
T ss_pred HHHhcCceEEEeccccccccchhhh---------hhcc---------eeeeeecCCCcEEEEeecCCCc-eEEEeccCH-
Confidence 78889999999999974321 1111 1111 1235788999999987643221 112222333
Q ss_pred HHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEe
Q 001541 403 LERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALA 482 (1057)
Q Consensus 403 ~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vG 482 (1057)
.+|.+|||.++.+.|.|.+... ...+...|+.++
T Consensus 169 --------------------~kvsvIPnAv~~~~f~P~~~~~--------------------------~S~~i~~ivv~s 202 (426)
T KOG1111|consen 169 --------------------AKVSVIPNAVVTHTFTPDAADK--------------------------PSADIITIVVAS 202 (426)
T ss_pred --------------------hHeeeccceeeccccccCcccc--------------------------CCCCeeEEEEEe
Confidence 3999999999999999854321 023347899999
Q ss_pred CCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHH
Q 001541 483 RPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIY 561 (1057)
Q Consensus 483 Rl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly 561 (1057)
||.++||++.|++++.++..+ .|++.+ |+|+||.. ..+++..+++.++.+|.++|.++.+++.+.|
T Consensus 203 RLvyrKGiDll~~iIp~vc~~--~p~vrfii~GDGPk~-----------i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl 269 (426)
T KOG1111|consen 203 RLVYRKGIDLLLEIIPSVCDK--HPEVRFIIIGDGPKR-----------IDLEEMLEKLFLQDRVVMLGTVPHDRVRDVL 269 (426)
T ss_pred eeeeccchHHHHHHHHHHHhc--CCCeeEEEecCCccc-----------chHHHHHHHhhccCceEEecccchHHHHHHH
Confidence 999999999999999999754 556664 78999873 4466778889999999999999999999999
Q ss_pred HHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHH
Q 001541 562 RLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCR 641 (1057)
Q Consensus 562 ~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~ 641 (1057)
..- |+|++||+.|.|+++++|||+||+|||+|..||.+|++.+. -+...+.+++++++++++++..-..- -
T Consensus 270 ~~G----~IFlntSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d--~i~~~~~~~~dl~~~v~~ai~~~~~~---p 340 (426)
T KOG1111|consen 270 VRG----DIFLNTSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED--MITLGEPGPDDLVGAVEKAITKLRTL---P 340 (426)
T ss_pred hcC----cEEeccHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCcc--ceeccCCChHHHHHHHHHHHHHhccC---c
Confidence 999 99999999999999999999999999999999999998643 34455568999999999988732111 1
Q ss_pred HHHHHHh-hcCCHHHHHHHHHHHHHcccCCC
Q 001541 642 QNGLKNI-HLFSWPEHCKTYLSRIAGCKPRH 671 (1057)
Q Consensus 642 ~~~~~~v-~~fsw~~~a~~~l~~~~~~~~~~ 671 (1057)
....+.+ +.|+|...+++..+.|.++....
T Consensus 341 ~~~h~~v~~~y~w~dVa~rTekvy~r~~~t~ 371 (426)
T KOG1111|consen 341 LEFHDRVKKMYSWKDVAERTEKVYDRAATTS 371 (426)
T ss_pred hhHHHHHHHhccHHHHHHHHHHHHHHHhhcc
Confidence 2233455 58999999999999999887654
No 41
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=100.00 E-value=2.9e-31 Score=304.52 Aligned_cols=385 Identities=21% Similarity=0.270 Sum_probs=272.8
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcccc
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
||++|+.+.. |..||.+.++..++++|++.| |+|++++.....+....... .
T Consensus 1 kIl~i~~~~~-----------~~~~G~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~~~~~~~---------------~ 52 (394)
T cd03794 1 KILILSQYFP-----------PELGGGAFRTTELAEELVKRG--HEVTVITGSPNYPSGKIYKG---------------Y 52 (394)
T ss_pred CEEEEecccC-----------CccCCcceeHHHHHHHHHhCC--ceEEEEecCCCccccccccc---------------c
Confidence 6899985443 556999999999999999999 99999987643221110000 0
Q ss_pred ccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC--CchHHHHHH
Q 001541 247 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA--DAGDSAALL 324 (1057)
Q Consensus 247 ~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~--~~~~~a~~l 324 (1057)
......++.+++++..... ... .+..+. ..+.+.....+.+.. +..+||+||+|.+ .....+..+
T Consensus 53 ~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~-~~~~~~~~~~~~~~~-----~~~~~D~v~~~~~~~~~~~~~~~~ 119 (394)
T cd03794 53 KREEVDGVRVHRVPLPPYK----KNG---LLKRLL-NYLSFALSALLALLK-----RRRRPDVIIATSPPLLIALAALLL 119 (394)
T ss_pred eEEecCCeEEEEEecCCCC----ccc---hHHHHH-hhhHHHHHHHHHHHh-----cccCCCEEEEcCChHHHHHHHHHH
Confidence 0012357888887764431 000 001110 111111111111110 1257999999973 345556666
Q ss_pred HhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHH
Q 001541 325 SGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 404 (1057)
Q Consensus 325 ~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~ 404 (1057)
++..++|+|++.|++++...... +..... ...+++.+++ |+..++.+|.|+++|+...+.+. .
T Consensus 120 ~~~~~~~~i~~~h~~~~~~~~~~---~~~~~~--~~~~~~~~~~--~~~~~~~~d~vi~~s~~~~~~~~-~--------- 182 (394)
T cd03794 120 ARLKGAPFVLEVRDLWPESAVAL---GLLKNG--SLLYRLLRKL--ERLIYRRADAIVVISPGMREYLV-R--------- 182 (394)
T ss_pred HHhcCCCEEEEehhhcchhHHHc---cCcccc--chHHHHHHHH--HHHHHhcCCEEEEECHHHHHHHH-h---------
Confidence 77779999999999876543221 111111 0112333333 67789999999999998777653 1
Q ss_pred HHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCC
Q 001541 405 RKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARP 484 (1057)
Q Consensus 405 ~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl 484 (1057)
.+.+..++.++|||++...+.+..... ...+.....+++.|+++|++
T Consensus 183 -------------~~~~~~~~~~i~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~i~~~G~~ 229 (394)
T cd03794 183 -------------RGVPPEKISVIPNGVDLELFKPPPADE--------------------SLRKELGLDDKFVVLYAGNI 229 (394)
T ss_pred -------------cCCCcCceEEcCCCCCHHHcCCccchh--------------------hhhhccCCCCcEEEEEecCc
Confidence 112234899999999988776432110 01222334667899999999
Q ss_pred CCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHH
Q 001541 485 DPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRL 563 (1057)
Q Consensus 485 ~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~ 563 (1057)
.+.||++.+++|+..+.+. +++.| ++|+++. ...+.+++...++ ++|.|.|+++.+++.++|+.
T Consensus 230 ~~~k~~~~l~~~~~~l~~~---~~~~l~i~G~~~~-----------~~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~ 294 (394)
T cd03794 230 GRAQGLDTLLEAAALLKDR---PDIRFLIVGDGPE-----------KEELKELAKALGL-DNVTFLGRVPKEELPELLAA 294 (394)
T ss_pred ccccCHHHHHHHHHHHhhc---CCeEEEEeCCccc-----------HHHHHHHHHHcCC-CcEEEeCCCChHHHHHHHHh
Confidence 9999999999999999653 45554 7787765 2344555555555 67999999999999999999
Q ss_pred hhcCCcEEEEcCCCCCC-----CHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHH
Q 001541 564 AAKTKGVFINPAFIEPF-----GLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWA 638 (1057)
Q Consensus 564 Aa~~~dv~v~ps~~Egf-----gl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~ 638 (1057)
| |++++|+..|++ |++++|||+||+|||+++.|+..+++.++.+|+++++.|+++++++|.+++.+++.++
T Consensus 295 ~----di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~ 370 (394)
T cd03794 295 A----DVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDPEERA 370 (394)
T ss_pred h----CeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhChHHHH
Confidence 9 999999988865 8889999999999999999999999998889999999999999999999999999999
Q ss_pred HHHHHHHHHh-hcCCHHHHHHHHH
Q 001541 639 RCRQNGLKNI-HLFSWPEHCKTYL 661 (1057)
Q Consensus 639 ~~~~~~~~~v-~~fsw~~~a~~~l 661 (1057)
++++++++.+ ++|||+.++++|+
T Consensus 371 ~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 371 EMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHHHHHHhhcHHHHHHhcC
Confidence 9999999999 4999999998873
No 42
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=100.00 E-value=2.7e-31 Score=312.56 Aligned_cols=374 Identities=18% Similarity=0.216 Sum_probs=251.3
Q ss_pred CCcHHHHHHHHHHHHhcC--CCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEcc-CCCccc
Q 001541 190 TGGQVKYVVELARALGSM--PGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIP-FGPKDK 266 (1057)
Q Consensus 190 ~GG~~~~v~~LA~aLa~~--Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip-~~p~~~ 266 (1057)
.||.++.+++.+.+|.+. + |+|+|+|...+... .+.+. .-...|..+ ..+++.++++. .+ .
T Consensus 13 ggg~ervl~~a~~~l~~~~~~--~~v~i~t~~~~~~~--------~~~l~-~~~~~f~~~--~~~~~~~~~~~~~~---~ 76 (419)
T cd03806 13 GGGGERVLWCAVRALQKRYPN--NIVVIYTGDLDATP--------EEILE-KVESRFNIE--LDRPRIVFFLLKYR---K 76 (419)
T ss_pred CCCchHHHHHHHHHHHHhCCC--cEEEEECCCCCCCH--------HHHHH-HHHHhcCee--cCCCceEEEEecce---e
Confidence 459999999999999998 6 99999998753211 00000 000011111 12456655553 21 1
Q ss_pred ccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcC-CCc-hHHHHHHHhcCCCCEEEEecCCch---
Q 001541 267 YIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHY-ADA-GDSAALLSGALNVPMLFTGHSLGR--- 341 (1057)
Q Consensus 267 ~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~-~~~-~~~a~~l~~~~~iP~V~t~H~l~~--- 341 (1057)
++++ ..|+++..+...+...+ ..+....+ .+||||..|. +.. ..++.++ .++|+|+.+| ++
T Consensus 77 ~~~~-~~~~r~~~~~~~~~~~~----~~~~~~~~----~~pDv~i~~~g~~~~~~~~~~~---~~~~~i~y~h--~P~~~ 142 (419)
T cd03806 77 LVEA-STYPRFTLLGQALGSMI----LGLEALLK----LVPDIFIDTMGYPFTYPLVRLL---GGCPVGAYVH--YPTIS 142 (419)
T ss_pred eecc-ccCCceeeHHHHHHHHH----HHHHHHHh----cCCCEEEEcCCcccHHHHHHHh---cCCeEEEEec--CCcch
Confidence 2222 35565433322222222 22222111 3699998886 333 2333323 3889999999 33
Q ss_pred -hhHHHHHHhhh--------cchH----HHHHHH-HHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHH
Q 001541 342 -DKLEQLLKQAR--------LSRD----EINATY-KIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKL 407 (1057)
Q Consensus 342 -~~~~~l~~~g~--------~~~~----~~~~~y-k~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l 407 (1057)
+.+.. ...+. ..+. .+...| +.+.. .|+++++.||.|+++|+...+.+...+..
T Consensus 143 ~d~l~~-~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~--~~~~~~~~aD~ii~~S~~~~~~~~~~~~~--------- 210 (419)
T cd03806 143 TDMLQK-VRSREASYNNSATIARSPVLSKAKLLYYRLFAF--LYGLAGSFADVVMVNSTWTRNHIRSLWKR--------- 210 (419)
T ss_pred HHHHHH-HhhccccccCccchhccchHHHHHHHHHHHHHH--HHHHHhhcCCEEEECCHHHHHHHHHHhCc---------
Confidence 22211 11111 0111 112222 12222 47889999999999999877765443321
Q ss_pred HHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCC
Q 001541 408 RARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPK 487 (1057)
Q Consensus 408 ~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~ 487 (1057)
..++.|||||+|.+.|.+.... ...+.++|+|+||+.+.
T Consensus 211 --------------~~~~~vi~~gvd~~~~~~~~~~---------------------------~~~~~~~il~vgr~~~~ 249 (419)
T cd03806 211 --------------NTKPSIVYPPCDVEELLKLPLD---------------------------EKTRENQILSIAQFRPE 249 (419)
T ss_pred --------------CCCcEEEcCCCCHHHhcccccc---------------------------cccCCcEEEEEEeecCC
Confidence 1278999999998877542210 02456899999999999
Q ss_pred CCHHHHHHHHHhcccccCC---CcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHH
Q 001541 488 KNITTLVKAFGECRPLREL---ANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRL 563 (1057)
Q Consensus 488 Kgi~~Ll~A~~~l~~~~~~---~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~ 563 (1057)
||++.+|+||..+.+..+. +++.| |+|++... +..++...++++++++++.++|.|+|.++.+++..+|+.
T Consensus 250 K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~-----~~~~~~~~L~~~~~~l~l~~~V~f~g~v~~~~l~~~l~~ 324 (419)
T cd03806 250 KNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNE-----DDEKRVEDLKLLAKELGLEDKVEFVVNAPFEELLEELST 324 (419)
T ss_pred CCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCc-----ccHHHHHHHHHHHHHhCCCCeEEEecCCCHHHHHHHHHh
Confidence 9999999999999754433 35665 77876431 123467889999999999999999999999999999999
Q ss_pred hhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCc-hhhhh---cCCceEEeCCCCHHHHHHHHHHHHhCHHH-HH
Q 001541 564 AAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP-VDIHR---VLDNGLLVDPHDQQSVADALLKLVADKQL-WA 638 (1057)
Q Consensus 564 Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~-~eiv~---~~~~Gllv~p~d~~~la~aI~~ll~d~~~-~~ 638 (1057)
| |++|+|+..|+||++++||||||+|||+++.||+ .+++. ++.+|++++ |+++++++|.+++++++. ++
T Consensus 325 a----dv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~ 398 (419)
T cd03806 325 A----SIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERL 398 (419)
T ss_pred C----eEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHH
Confidence 9 9999999999999999999999999999999886 57887 789999985 999999999999996654 44
Q ss_pred HHHHHHHHHhhcCCHHHHH
Q 001541 639 RCRQNGLKNIHLFSWPEHC 657 (1057)
Q Consensus 639 ~~~~~~~~~v~~fsw~~~a 657 (1057)
.+++++++..++|||+.+.
T Consensus 399 ~~~~~~~~~~~~fs~~~f~ 417 (419)
T cd03806 399 RIRRAARSSVKRFSDEEFE 417 (419)
T ss_pred HHHHHHHHHHHhhCHHHhc
Confidence 4544444434899999765
No 43
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=100.00 E-value=8.4e-32 Score=311.13 Aligned_cols=346 Identities=16% Similarity=0.160 Sum_probs=245.1
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcC--CCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCc
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSM--PGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDD 243 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~--Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~ 243 (1057)
|||++++.. + +..||+++++.+|+++|.+. | |+|.++++.... ...+ +
T Consensus 1 mkI~~~~~~-~-----------~~~GG~e~~~~~l~~~L~~~~~g--~~v~v~~~~~~~-~~~~--------~------- 50 (359)
T PRK09922 1 MKIAFIGEA-V-----------SGFGGMETVISNVINTFEESKIN--CEMFFFCRNDKM-DKAW--------L------- 50 (359)
T ss_pred CeeEEeccc-c-----------cCCCchhHHHHHHHHHhhhcCcc--eeEEEEecCCCC-ChHH--------H-------
Confidence 899999742 2 45799999999999999999 7 999999875310 0000 0
Q ss_pred cccccCCCCCeEEE-EccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHH
Q 001541 244 FMDDMGESSGAYII-RIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAA 322 (1057)
Q Consensus 244 ~~~~~~~~~gv~i~-rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~ 322 (1057)
..+.++ .++..+. +.+.. ...+.++.+.+.+ .+||+||+|...+...+.
T Consensus 51 --------~~~~~~~~~~~~~~----------~~~~~-----~~~~~~l~~~l~~-------~~~Dii~~~~~~~~~~~~ 100 (359)
T PRK09922 51 --------KEIKYAQSFSNIKL----------SFLRR-----AKHVYNFSKWLKE-------TQPDIVICIDVISCLYAN 100 (359)
T ss_pred --------Hhcchhcccccchh----------hhhcc-----cHHHHHHHHHHHh-------cCCCEEEEcCHHHHHHHH
Confidence 001100 0110000 00000 0111222223322 579999999876666666
Q ss_pred HHHhcCCCC--EEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCC
Q 001541 323 LLSGALNVP--MLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFD 400 (1057)
Q Consensus 323 ~l~~~~~iP--~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~ 400 (1057)
.+++..++| ++.+.|....... .+. ...+..+|.++++|+...+.+... +.
T Consensus 101 ~~~~~~~~~~~~~~~~h~~~~~~~----------------~~~--------~~~~~~~d~~i~~S~~~~~~~~~~--~~- 153 (359)
T PRK09922 101 KARKKSGKQFKIFSWPHFSLDHKK----------------HAE--------CKKITCADYHLAISSGIKEQMMAR--GI- 153 (359)
T ss_pred HHHHHhCCCCeEEEEecCcccccc----------------hhh--------hhhhhcCCEEEEcCHHHHHHHHHc--CC-
Confidence 666666655 4666675422110 000 012368999999998876665431 12
Q ss_pred hHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEE
Q 001541 401 PVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILA 480 (1057)
Q Consensus 401 ~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~ 480 (1057)
+.+++.+||||+|.+.+...... ..++++|++
T Consensus 154 --------------------~~~ki~vi~N~id~~~~~~~~~~----------------------------~~~~~~i~~ 185 (359)
T PRK09922 154 --------------------SAQRISVIYNPVEIKTIIIPPPE----------------------------RDKPAVFLY 185 (359)
T ss_pred --------------------CHHHEEEEcCCCCHHHccCCCcc----------------------------cCCCcEEEE
Confidence 22389999999997654321100 134688999
Q ss_pred EeCCC--CCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCC--C
Q 001541 481 LARPD--PKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQ--S 555 (1057)
Q Consensus 481 vGRl~--~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~--~ 555 (1057)
+||+. +.||+..+++|+..+.+ ++. +++|+|++ ...+.++++++++.++|.|+|+++. +
T Consensus 186 ~Grl~~~~~k~~~~l~~a~~~~~~-----~~~l~ivG~g~~-----------~~~l~~~~~~~~l~~~v~f~G~~~~~~~ 249 (359)
T PRK09922 186 VGRLKFEGQKNVKELFDGLSQTTG-----EWQLHIIGDGSD-----------FEKCKAYSRELGIEQRIIWHGWQSQPWE 249 (359)
T ss_pred EEEEecccCcCHHHHHHHHHhhCC-----CeEEEEEeCCcc-----------HHHHHHHHHHcCCCCeEEEecccCCcHH
Confidence 99986 45999999999998742 445 48898875 4567888999999999999998754 6
Q ss_pred cHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcC-CCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCH
Q 001541 556 DVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK-NGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADK 634 (1057)
Q Consensus 556 dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~-~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~ 634 (1057)
++..+|+.| |++|+||..||||++++||||||+|||+|+ .||+.|++.++.+|++++|+|+++++++|.++++++
T Consensus 250 ~~~~~~~~~----d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~ 325 (359)
T PRK09922 250 VVQQKIKNV----SALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGE 325 (359)
T ss_pred HHHHHHhcC----cEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCc
Confidence 899999999 999999999999999999999999999999 899999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHccc
Q 001541 635 QLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCK 668 (1057)
Q Consensus 635 ~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~ 668 (1057)
+.+ ......+.+.+|+-+..++++..+|..++
T Consensus 326 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (359)
T PRK09922 326 VKY--QHDAIPNSIERFYEVLYFKNLNNALFSKL 357 (359)
T ss_pred ccC--CHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 754 22333344578899999999999998765
No 44
>PLN02949 transferase, transferring glycosyl groups
Probab=100.00 E-value=5.6e-31 Score=311.08 Aligned_cols=412 Identities=15% Similarity=0.164 Sum_probs=274.5
Q ss_pred hhhhcccCCcceEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCee--eEEEEecCCCCCCCCCccCCc
Q 001541 155 ETWISQQKGKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVY--RVDLLTRQVSAPDVDWSYGEP 232 (1057)
Q Consensus 155 ~~~~~~~~~~~m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~--~V~vit~~~~~~~~~~~y~~~ 232 (1057)
.+|--...+++++|+++.++. | ..||.++.+++.+.+|.+.| + .|.++|...+...
T Consensus 23 ~~~~~~~~~~~~~v~f~HP~~---------~---~ggG~ERvl~~a~~~l~~~~--~~~~v~iyt~~~d~~~-------- 80 (463)
T PLN02949 23 LSVLRARRSRKRAVGFFHPYT---------N---DGGGGERVLWCAVRAIQEEN--PDLDCVIYTGDHDASP-------- 80 (463)
T ss_pred HHHHhcccCCCcEEEEECCCC---------C---CCCChhhHHHHHHHHHHhhC--CCCeEEEEcCCCCCCH--------
Confidence 345555566778999995322 2 35699999999999999998 7 7888887643211
Q ss_pred ccccCCCCCCccccccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEE
Q 001541 233 TEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHG 312 (1057)
Q Consensus 233 ~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~ 312 (1057)
.+.+.. ..+.|.-++. ....++++..+ .+++ ...|+++.-+.. .+..+....+.+.. ..|||+.-
T Consensus 81 ~~~l~~-~~~~~~i~~~--~~~~~v~l~~~---~~~~-~~~~~~~t~~~~-~~~~~~l~~~~~~~-------~~p~v~vD 145 (463)
T PLN02949 81 DSLAAR-ARDRFGVELL--SPPKVVHLRKR---KWIE-EETYPRFTMIGQ-SLGSVYLAWEALCK-------FTPLYFFD 145 (463)
T ss_pred HHHHHH-HHhhcceecC--CCceEEEeccc---cccc-cccCCceehHHH-HHHHHHHHHHHHHh-------cCCCEEEe
Confidence 111100 0011211111 12233333211 3343 345666543322 22222222233322 24665543
Q ss_pred cCCC-chHHHHHHHhcCCCCEEEEecCCchhh--HHHHHHhhh--------cch----HHHHHHHHHHHHHHHHHHHhhc
Q 001541 313 HYAD-AGDSAALLSGALNVPMLFTGHSLGRDK--LEQLLKQAR--------LSR----DEINATYKIMRRIEAEELSLDA 377 (1057)
Q Consensus 313 h~~~-~~~~a~~l~~~~~iP~V~t~H~l~~~~--~~~l~~~g~--------~~~----~~~~~~yk~~~ri~~E~~~l~~ 377 (1057)
.... ..+. +.+..++|+++++|...-.. +... ..+. ... ......|...... .++++.+.
T Consensus 146 t~~~~~~~p---l~~~~~~~v~~yvH~p~~~~dm~~~v-~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~-l~~~~~~~ 220 (463)
T PLN02949 146 TSGYAFTYP---LARLFGCKVVCYTHYPTISSDMISRV-RDRSSMYNNDASIARSFWLSTCKILYYRAFAW-MYGLVGRC 220 (463)
T ss_pred CCCcccHHH---HHHhcCCcEEEEEeCCcchHHHHHHH-hhcccccCccchhhccchhHHHHHHHHHHHHH-HHHHHcCC
Confidence 3321 2222 22345899999999542211 1110 0000 000 1122222211111 47788899
Q ss_pred CCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCC
Q 001541 378 SEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPAS 457 (1057)
Q Consensus 378 ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~ 457 (1057)
||.|+++|+...+.+.+.+.. ..++.+++||+|...+......
T Consensus 221 ad~ii~nS~~t~~~l~~~~~~-----------------------~~~i~vvyp~vd~~~~~~~~~~-------------- 263 (463)
T PLN02949 221 AHLAMVNSSWTKSHIEALWRI-----------------------PERIKRVYPPCDTSGLQALPLE-------------- 263 (463)
T ss_pred CCEEEECCHHHHHHHHHHcCC-----------------------CCCeEEEcCCCCHHHcccCCcc--------------
Confidence 999999999877765443321 1278999999998765321100
Q ss_pred CCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhccccc--CCCcEEE-EEecCCCCcccchhhHHHHHHHH
Q 001541 458 PDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLR--ELANLTL-IMGNRDGIDEMSSTSASVLLSVL 534 (1057)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~--~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~ 534 (1057)
..+++++|+++||+.++||++.+|+||..+.+.. ..+++.| |+|++.. .++.++..+++
T Consensus 264 -------------~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~-----~~~~~~~~eL~ 325 (463)
T PLN02949 264 -------------RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRN-----KEDEERLQKLK 325 (463)
T ss_pred -------------ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCC-----cccHHHHHHHH
Confidence 0235678999999999999999999999875421 2345665 7787642 12245678899
Q ss_pred HHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCch-hhhhc---CC
Q 001541 535 KLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPV-DIHRV---LD 610 (1057)
Q Consensus 535 ~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~-eiv~~---~~ 610 (1057)
++++++++.++|.|+|+++.+++..+|+.| +++|+|+..|+||++++||||+|+|||+++.||+. |++.+ +.
T Consensus 326 ~la~~l~L~~~V~f~g~v~~~el~~ll~~a----~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~ 401 (463)
T PLN02949 326 DRAKELGLDGDVEFHKNVSYRDLVRLLGGA----VAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQ 401 (463)
T ss_pred HHHHHcCCCCcEEEeCCCCHHHHHHHHHhC----cEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCc
Confidence 999999999999999999999999999999 99999999999999999999999999999999975 77754 56
Q ss_pred ceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccC
Q 001541 611 NGLLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKP 669 (1057)
Q Consensus 611 ~Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~~ 669 (1057)
+|++++ |+++++++|.++++ ++++++++++++++.+++|||+.+++++.+.+..+..
T Consensus 402 tG~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~~ 459 (463)
T PLN02949 402 TGFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRANRFSEQRFNEDFKDAIRPILN 459 (463)
T ss_pred ccccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh
Confidence 899985 99999999999998 6788999999999999889999999999999987654
No 45
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=100.00 E-value=2.3e-31 Score=304.04 Aligned_cols=285 Identities=24% Similarity=0.282 Sum_probs=220.1
Q ss_pred CcceEEEEcCC--CchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEE
Q 001541 305 VWPVAIHGHYA--DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVI 382 (1057)
Q Consensus 305 ~~pDvIh~h~~--~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi 382 (1057)
.+||+||+|.. .....+..+++..++|+|++.|+........ . ....+.......+...+..++.++
T Consensus 86 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~~~~~~~~~i~ 154 (375)
T cd03821 86 READIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALP--------H---KALKKRLAWFLFERRLLQAAAAVH 154 (375)
T ss_pred CCCCEEEEecccchHHHHHHHHHHHhCCCEEEEccccccccccc--------c---chhhhHHHHHHHHHHHHhcCCEEE
Confidence 46999999973 3445555666778999999999875433210 0 001112222234566789999999
Q ss_pred ecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCch
Q 001541 383 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPI 462 (1057)
Q Consensus 383 ~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~ 462 (1057)
+++..........+ +..++.+||||+|.+.|.+.....
T Consensus 155 ~~s~~~~~~~~~~~------------------------~~~~~~vi~~~~~~~~~~~~~~~~------------------ 192 (375)
T cd03821 155 ATSEQEAAEIRRLG------------------------LKAPIAVIPNGVDIPPFAALPSRG------------------ 192 (375)
T ss_pred ECCHHHHHHHHhhC------------------------CcccEEEcCCCcChhccCcchhhh------------------
Confidence 99976655543221 123899999999998876432110
Q ss_pred HHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcC
Q 001541 463 WSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYD 541 (1057)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~ 541 (1057)
....+....++++|+++||+.+.||++.+++|+..+... .+++.+ ++|.++.. +...+..++.+++
T Consensus 193 --~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~--~~~~~l~i~G~~~~~---------~~~~~~~~~~~~~ 259 (375)
T cd03821 193 --RRRKFPILPDKRIILFLGRLHPKKGLDLLIEAFAKLAER--FPDWHLVIAGPDEGG---------YRAELKQIAAALG 259 (375)
T ss_pred --hhhhccCCCCCcEEEEEeCcchhcCHHHHHHHHHHhhhh--cCCeEEEEECCCCcc---------hHHHHHHHHHhcC
Confidence 012233356788999999999999999999999999754 345554 77876431 2344555568889
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHH
Q 001541 542 LYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQ 621 (1057)
Q Consensus 542 l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~ 621 (1057)
+.++|.|+|+++.+++..+|+.| |++|+||..|+||++++||||||+|||+++.||..+++.+ .+|+++++ +.+
T Consensus 260 ~~~~v~~~g~~~~~~~~~~~~~a----dv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~ 333 (375)
T cd03821 260 LEDRVTFTGMLYGEDKAAALADA----DLFVLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVD 333 (375)
T ss_pred ccceEEEcCCCChHHHHHHHhhC----CEEEeccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChH
Confidence 99999999999999999999999 9999999999999999999999999999999999999988 78888864 669
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHH
Q 001541 622 SVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYL 661 (1057)
Q Consensus 622 ~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l 661 (1057)
+++++|.+++++++.++.+++++++.+ ++|||+..+++|+
T Consensus 334 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 334 ALAAALRRALELPQRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 999999999999999999999999997 7999999999886
No 46
>PLN02846 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=3.7e-31 Score=308.10 Aligned_cols=383 Identities=16% Similarity=0.094 Sum_probs=245.5
Q ss_pred CcceEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCC
Q 001541 163 GKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSD 242 (1057)
Q Consensus 163 ~~~m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~ 242 (1057)
.++|||++++.-.+ |..+|+...+..++..|+++|. |+|+|+++.....+....|+.....-.+...+
T Consensus 2 ~~~mrIaivTdt~l-----------P~vnGva~s~~~~a~~L~~~G~-heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e 69 (462)
T PLN02846 2 QKKQHIAIFTTASL-----------PWMTGTAVNPLFRAAYLAKDGD-REVTLVIPWLSLKDQKLVYPNKITFSSPSEQE 69 (462)
T ss_pred CCCCEEEEEEcCCC-----------CCCCCeeccHHHHHHHHHhcCC-cEEEEEecCCccccccccccccccccCchhhh
Confidence 35799999997776 8999999999999999999983 49999988642111111111000000000000
Q ss_pred ccccccCCCCCeEEEEccCCCcccccccccCCCChhH-HHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC-CchHH
Q 001541 243 DFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPE-FVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA-DAGDS 320 (1057)
Q Consensus 243 ~~~~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~-f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~-~~~~~ 320 (1057)
..+.+..+-++.++|.-+...|-.+ .-+++... ....+ .+.|.+ .+|||||+|.+ ..|+.
T Consensus 70 ---~~~~~~~~~~v~r~~s~~~p~yp~r-~~~~~r~~~~~~~i-------~~~l~~-------~~pDVIHv~tP~~LG~~ 131 (462)
T PLN02846 70 ---AYVRQWLEERISFLPKFSIKFYPGK-FSTDKRSILPVGDI-------SETIPD-------EEADIAVLEEPEHLTWY 131 (462)
T ss_pred ---hhhhhhccCeEEEecccccccCccc-ccccccccCChHHH-------HHHHHh-------cCCCEEEEcCchhhhhH
Confidence 0011111334555554332111110 00000000 01112 222222 67999999987 45555
Q ss_pred --HHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHh-hcCCEEEecCHHHHHHHHhhhC
Q 001541 321 --AALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSL-DASEIVITSTRQEIEEQWRLYD 397 (1057)
Q Consensus 321 --a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l-~~ad~Vi~~S~~~~~~~~~~y~ 397 (1057)
+..+++++++ +|.|.|.-+.++.... ..|.... ...++..++ +. ..+|.|++.|....+ +.+
T Consensus 132 ~~g~~~~~k~~~-vV~tyHT~y~~Y~~~~-~~g~~~~----~l~~~~~~~-----~~r~~~d~vi~pS~~~~~-l~~--- 196 (462)
T PLN02846 132 HHGKRWKTKFRL-VIGIVHTNYLEYVKRE-KNGRVKA----FLLKYINSW-----VVDIYCHKVIRLSAATQD-YPR--- 196 (462)
T ss_pred HHHHHHHhcCCc-EEEEECCChHHHHHHh-ccchHHH----HHHHHHHHH-----HHHHhcCEEEccCHHHHH-Hhh---
Confidence 6667776655 8889999665443321 1111111 111122221 21 238999999974322 211
Q ss_pred CCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCC--C
Q 001541 398 GFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPR--K 475 (1057)
Q Consensus 398 ~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 475 (1057)
.+.+.++|||.+.|.+.... . .......+ .
T Consensus 197 --------------------------~~i~~v~GVd~~~f~~~~~~-------------------~---~~~~~~~~~~~ 228 (462)
T PLN02846 197 --------------------------SIICNVHGVNPKFLEIGKLK-------------------L---EQQKNGEQAFT 228 (462)
T ss_pred --------------------------CEEecCceechhhcCCCccc-------------------H---hhhcCCCCCcc
Confidence 34455699999988754211 0 01111222 3
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCC
Q 001541 476 PVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQ 554 (1057)
Q Consensus 476 ~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~ 554 (1057)
+.++|+||+.+.||++.||+|+.++... .+++. +|+|+|++ ..++++++.++++..++ |.|..
T Consensus 229 ~~~l~vGRL~~eK~~~~Li~a~~~l~~~--~~~~~l~ivGdGp~-----------~~~L~~~a~~l~l~~~v-f~G~~-- 292 (462)
T PLN02846 229 KGAYYIGKMVWSKGYKELLKLLHKHQKE--LSGLEVDLYGSGED-----------SDEVKAAAEKLELDVRV-YPGRD-- 292 (462)
T ss_pred eEEEEEecCcccCCHHHHHHHHHHHHhh--CCCeEEEEECCCcc-----------HHHHHHHHHhcCCcEEE-ECCCC--
Confidence 5799999999999999999999998642 34555 48899987 56678888888886444 88863
Q ss_pred CcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCH
Q 001541 555 SDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADK 634 (1057)
Q Consensus 555 ~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~ 634 (1057)
+..++|+.+ ||||+||..|+||++++||||||+|||+++.++ .+++.++.||++++ |.++++++|.++|+++
T Consensus 293 -~~~~~~~~~----DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai~~~l~~~ 364 (462)
T PLN02846 293 -HADPLFHDY----KVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRATLKALAEE 364 (462)
T ss_pred -CHHHHHHhC----CEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--CHHHHHHHHHHHHccC
Confidence 445799999 999999999999999999999999999999998 59999999999995 8999999999999853
Q ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcc
Q 001541 635 QLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGC 667 (1057)
Q Consensus 635 ~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~ 667 (1057)
. ..++..+ .+.|||+..+++|++.|+-.
T Consensus 365 ~--~~~~~~a---~~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 365 P--APLTDAQ---RHELSWEAATERFLRVADLD 392 (462)
T ss_pred c--hhHHHHH---HHhCCHHHHHHHHHHHhccC
Confidence 2 2222222 25999999999999999743
No 47
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=100.00 E-value=5.3e-31 Score=301.32 Aligned_cols=371 Identities=23% Similarity=0.317 Sum_probs=265.2
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcccc
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
||++++.... |..||...++.+++++|.+.| |+|+++|..........
T Consensus 1 kil~~~~~~~-----------p~~~G~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~~------------------- 48 (374)
T cd03817 1 KIGIFTDTYL-----------PQVNGVATSIRRLAEELEKRG--HEVYVVAPSYPGAPEEE------------------- 48 (374)
T ss_pred CeeEeehhcc-----------CCCCCeehHHHHHHHHHHHcC--CeEEEEeCCCCCCCccc-------------------
Confidence 5888885443 789999999999999999999 99999987642211100
Q ss_pred ccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC-CchHHHHHHH
Q 001541 247 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA-DAGDSAALLS 325 (1057)
Q Consensus 247 ~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~-~~~~~a~~l~ 325 (1057)
...++...+.+... .....+.+ .+...+ .+.+.+ .+||+||+|.. ..+..+..++
T Consensus 49 ---~~~~~~~~~~~~~~-----~~~~~~~~--~~~~~~-------~~~~~~-------~~~Div~~~~~~~~~~~~~~~~ 104 (374)
T cd03817 49 ---EVVVVRPFRVPTFK-----YPDFRLPL--PIPRAL-------IIILKE-------LGPDIVHTHTPFSLGLLGLRVA 104 (374)
T ss_pred ---ccccccccccccch-----hhhhhccc--cHHHHH-------HHHHhh-------cCCCEEEECCchhhhhHHHHHH
Confidence 00011111110000 00000110 011111 111111 57999999985 3455667778
Q ss_pred hcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHH
Q 001541 326 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1057)
Q Consensus 326 ~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~ 405 (1057)
+..++|+|++.|+........... .... ......+ ..++..+..+|.+++.|+...+.+... .
T Consensus 105 ~~~~~~~i~~~~~~~~~~~~~~~~-~~~~------~~~~~~~-~~~~~~~~~~d~i~~~s~~~~~~~~~~-~-------- 167 (374)
T cd03817 105 RKLGIPVVATYHTMYEDYTHYVPL-GRLL------ARAVVRR-KLSRRFYNRCDAVIAPSEKIADLLREY-G-------- 167 (374)
T ss_pred HHcCCCEEEEecCCHHHHHHHHhc-ccch------hHHHHHH-HHHHHHhhhCCEEEeccHHHHHHHHhc-C--------
Confidence 888999999999987643322111 1100 0011110 246678999999999999866554321 1
Q ss_pred HHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCC
Q 001541 406 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 485 (1057)
Q Consensus 406 ~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~ 485 (1057)
.. .++.++|||+|...+.+.... ..+..+...++++.|+++|++.
T Consensus 168 --------------~~-~~~~vi~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~i~~~G~~~ 212 (374)
T cd03817 168 --------------VK-RPIEVIPTGIDLDRFEPVDGD--------------------DERRKLGIPEDEPVLLYVGRLA 212 (374)
T ss_pred --------------CC-CceEEcCCccchhccCccchh--------------------HHHHhcCCCCCCeEEEEEeeee
Confidence 11 168999999999877643211 0122333346678999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHh
Q 001541 486 PKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLA 564 (1057)
Q Consensus 486 ~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~A 564 (1057)
+.||++.+++|+..+... .+++.+ ++|+++. ...+..+++++++.++|.|+|+++.+++..+|+.|
T Consensus 213 ~~k~~~~l~~~~~~~~~~--~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a 279 (374)
T cd03817 213 KEKNIDFLIRAFARLLKE--EPDVKLVIVGDGPE-----------REELEELARELGLADRVIFTGFVPREELPDYYKAA 279 (374)
T ss_pred cccCHHHHHHHHHHHHHh--CCCeEEEEEeCCch-----------HHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHc
Confidence 999999999999998653 345665 7787653 45677788888998999999999999999999999
Q ss_pred hcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Q 001541 565 AKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNG 644 (1057)
Q Consensus 565 a~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~ 644 (1057)
|++++|+..|++|++++|||+||+|||+++.|+..+++.++.+|+++++.+. +++++|.+++++++.++++++++
T Consensus 280 ----d~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~~~~~~~~~~ 354 (374)
T cd03817 280 ----DLFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPELRRRLSKNA 354 (374)
T ss_pred ----CEEEecccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998888 99999999999999999999999
Q ss_pred HHHhhcCCHHHHHHHHHHHHHc
Q 001541 645 LKNIHLFSWPEHCKTYLSRIAG 666 (1057)
Q Consensus 645 ~~~v~~fsw~~~a~~~l~~~~~ 666 (1057)
++.+++|+ +++++.++|++
T Consensus 355 ~~~~~~~~---~~~~~~~~~~~ 373 (374)
T cd03817 355 EESAEKFS---FAKKVEKLYEE 373 (374)
T ss_pred HHHHHHHH---HHHHHHHHHhc
Confidence 99997666 56666666654
No 48
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=100.00 E-value=5e-31 Score=301.90 Aligned_cols=268 Identities=23% Similarity=0.306 Sum_probs=219.6
Q ss_pred CcceEEEEcCC-CchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEe
Q 001541 305 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 383 (1057)
Q Consensus 305 ~~pDvIh~h~~-~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~ 383 (1057)
.+||+||+|+. ....++...++..++|++++.|+....... . . ..++..++.+|.+++
T Consensus 78 ~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-----~-------~~~~~~~~~~~~vi~ 136 (355)
T cd03799 78 LGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRSP---------D-----A-------IDLDEKLARADFVVA 136 (355)
T ss_pred cCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccccC---------c-----h-------HHHHHHHhhCCEEEE
Confidence 56999999987 444455555555689999999965321100 0 0 124456889999999
Q ss_pred cCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchH
Q 001541 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 463 (1057)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1057)
+|+...+.+...+. ....++.+||||+|.+.|.+...
T Consensus 137 ~s~~~~~~l~~~~~----------------------~~~~~~~vi~~~~d~~~~~~~~~--------------------- 173 (355)
T cd03799 137 ISEYNRQQLIRLLG----------------------CDPDKIHVVHCGVDLERFPPRPP--------------------- 173 (355)
T ss_pred CCHHHHHHHHHhcC----------------------CCcccEEEEeCCcCHHHcCCccc---------------------
Confidence 99998877655431 22238999999999887764320
Q ss_pred HHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCC
Q 001541 464 SEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDL 542 (1057)
Q Consensus 464 ~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l 542 (1057)
....+++.|+++|++.+.||++.+++++..+... .+++.+ ++|.++. ...+...+.++++
T Consensus 174 ------~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~--~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~ 234 (355)
T cd03799 174 ------PPPGEPLRILSVGRLVEKKGLDYLLEALALLKDR--GIDFRLDIVGDGPL-----------RDELEALIAELGL 234 (355)
T ss_pred ------cccCCCeEEEEEeeeccccCHHHHHHHHHHHhhc--CCCeEEEEEECCcc-----------HHHHHHHHHHcCC
Confidence 0134567899999999999999999999998653 356665 7888765 3556777888899
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCC------CCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeC
Q 001541 543 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFI------EPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVD 616 (1057)
Q Consensus 543 ~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~------Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~ 616 (1057)
.++|.|.|+++.+++..+|+.| |++|+|+.. |+||++++||||+|+|||+++.|+..+++.++.+|++++
T Consensus 235 ~~~v~~~g~~~~~~l~~~~~~a----di~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~ 310 (355)
T cd03799 235 EDRVTLLGAKSQEEVRELLRAA----DLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVP 310 (355)
T ss_pred CCeEEECCcCChHHHHHHHHhC----CEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeC
Confidence 8999999999999999999999 999999998 999999999999999999999999999999988999999
Q ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHH
Q 001541 617 PHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKT 659 (1057)
Q Consensus 617 p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~ 659 (1057)
+.|.++++++|.+++++++.+.++++++++.+ ++|||+..+++
T Consensus 311 ~~~~~~l~~~i~~~~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 311 PGDPEALADAIERLLDDPELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 99999999999999999999999999999999 69999998865
No 49
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=100.00 E-value=2.7e-31 Score=304.89 Aligned_cols=335 Identities=19% Similarity=0.210 Sum_probs=243.0
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCccccc
Q 001541 189 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYI 268 (1057)
Q Consensus 189 d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l 268 (1057)
..||.++++.+++++|++.| |+|++++....... +.. .....++.+++++....
T Consensus 10 ~~GG~~~~~~~l~~~L~~~~--~~v~~i~~~~~~~~----~~~----------------~~~~~~~~~~~~~~~~~---- 63 (358)
T cd03812 10 NRGGIETFIMNYYRNLDRSK--IQFDFLVTSKEEGD----YDD----------------EIEKLGGKIYYIPARKK---- 63 (358)
T ss_pred CCccHHHHHHHHHHhcCccc--eEEEEEEeCCCCcc----hHH----------------HHHHcCCeEEEecCCCc----
Confidence 58999999999999999998 99999987532110 000 01123666666443211
Q ss_pred ccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhcCCCCE-EEEecCCchhhHHHH
Q 001541 269 AKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPM-LFTGHSLGRDKLEQL 347 (1057)
Q Consensus 269 ~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~~~iP~-V~t~H~l~~~~~~~l 347 (1057)
.+..+. ..+.+.+.+ .+||+||+|+.....++..+++..+.|. +++.|+........
T Consensus 64 -------~~~~~~-------~~~~~~~~~-------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~- 121 (358)
T cd03812 64 -------NPLKYF-------KKLYKLIKK-------NKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKK- 121 (358)
T ss_pred -------cHHHHH-------HHHHHHHhc-------CCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEecccccccccc-
Confidence 111111 111122222 5799999999876666666666677775 67888765432110
Q ss_pred HHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEE
Q 001541 348 LKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAI 427 (1057)
Q Consensus 348 ~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~V 427 (1057)
. ..... ...+...+..++.++++|....+.+... .. ..++.+
T Consensus 122 ------~-----~~~~~---~~~~~~~~~~~~~~i~~s~~~~~~~~~~---~~---------------------~~~~~v 163 (358)
T cd03812 122 ------K-----KILKY---KVLRKLINRLATDYLACSEEAGKWLFGK---VK---------------------NKKFKV 163 (358)
T ss_pred ------c-----hhhHH---HHHHHHHHhcCCEEEEcCHHHHHHHHhC---CC---------------------cccEEE
Confidence 0 00000 1124567889999999999877665432 11 138999
Q ss_pred eCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC
Q 001541 428 IPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA 507 (1057)
Q Consensus 428 IpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~ 507 (1057)
||||+|.+.|.+.... ..........++++.|+++||+.+.||++.+++|+..+.+.. +
T Consensus 164 i~ngvd~~~~~~~~~~-------------------~~~~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~--~ 222 (358)
T cd03812 164 IPNGIDLEKFIFNEEI-------------------RKKRRELGILEDKFVIGHVGRFSEQKNHEFLIEIFAELLKKN--P 222 (358)
T ss_pred EeccCcHHHcCCCchh-------------------hhHHHHcCCCCCCEEEEEEeccccccChHHHHHHHHHHHHhC--C
Confidence 9999999887643211 011233344567899999999999999999999999997543 5
Q ss_pred cEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHH
Q 001541 508 NLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIE 586 (1057)
Q Consensus 508 ~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lE 586 (1057)
++.+ |+|+++. ...+.+.++++++.++|.|+|+ .+++..+|+.| |++|+||..|+||++++|
T Consensus 223 ~~~l~ivG~g~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a----di~v~ps~~E~~~~~~lE 285 (358)
T cd03812 223 NAKLLLVGDGEL-----------EEEIKKKVKELGLEDKVIFLGV--RNDVPELLQAM----DVFLFPSLYEGLPLVLIE 285 (358)
T ss_pred CeEEEEEeCCch-----------HHHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhc----CEEEecccccCCCHHHHH
Confidence 5664 8898774 4567778888999999999998 68999999999 999999999999999999
Q ss_pred HHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Q 001541 587 AAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI 648 (1057)
Q Consensus 587 AmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v 648 (1057)
|||+|+|||+|+.||..+++.+ ..|++..+.++++++++|.+++++|+.++.++..+....
T Consensus 286 Ama~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l~~~~~~~~~~~~~~~~~~ 346 (358)
T cd03812 286 AQASGLPCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILKLKSEDRRERSSESIKKKGL 346 (358)
T ss_pred HHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHHHHhCcchhhhhhhhhhccc
Confidence 9999999999999999999988 556667677899999999999999999888877766655
No 50
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=100.00 E-value=1.5e-30 Score=296.12 Aligned_cols=351 Identities=21% Similarity=0.247 Sum_probs=256.8
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCcccccc
Q 001541 190 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIA 269 (1057)
Q Consensus 190 ~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l~ 269 (1057)
.||.++++..|+++|.+.| ++|.+++.....+. ... ....++.++.++....
T Consensus 11 ~gG~~~~~~~l~~~l~~~~--~~v~~~~~~~~~~~--------~~~-------------~~~~~i~v~~~~~~~~----- 62 (365)
T cd03807 11 VGGAERMLVRLLKGLDRDR--FEHVVISLTDRGEL--------GEE-------------LEEAGVPVYCLGKRPG----- 62 (365)
T ss_pred CccHHHHHHHHHHHhhhcc--ceEEEEecCcchhh--------hHH-------------HHhcCCeEEEEecccc-----
Confidence 4999999999999999998 99999986532110 000 0113667766654211
Q ss_pred cccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhc-CCCCEEEEecCCchhhHHHHH
Q 001541 270 KELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLL 348 (1057)
Q Consensus 270 k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~ 348 (1057)
+... .+...+ .+.+.+ .+||+||+|.......+...+.. .++|++++.|+......
T Consensus 63 ----~~~~-~~~~~~-------~~~~~~-------~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---- 119 (365)
T cd03807 63 ----RPDP-GALLRL-------YKLIRR-------LRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG---- 119 (365)
T ss_pred ----cccH-HHHHHH-------HHHHHh-------hCCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc----
Confidence 1111 111112 222222 57999999977655555555554 68999999999865421
Q ss_pred HhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEe
Q 001541 349 KQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 428 (1057)
Q Consensus 349 ~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VI 428 (1057)
+. .. ++... .+......++.++++|+...+.+... ++. ..++.++
T Consensus 120 --~~-----~~---~~~~~--~~~~~~~~~~~~i~~s~~~~~~~~~~--~~~---------------------~~~~~vi 164 (365)
T cd03807 120 --KK-----ST---RLVAR--LRRLLSSFIPLIVANSAAAAEYHQAI--GYP---------------------PKKIVVI 164 (365)
T ss_pred --ch-----hH---hHHHH--HHHHhccccCeEEeccHHHHHHHHHc--CCC---------------------hhheeEe
Confidence 00 00 11111 24456788999999998876655432 222 2388999
Q ss_pred CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc
Q 001541 429 PPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELAN 508 (1057)
Q Consensus 429 pnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~ 508 (1057)
|||+|...|.+.... ....+.++..+++.++|+++||+.+.||++.+++|+..+.+. .++
T Consensus 165 ~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~--~~~ 224 (365)
T cd03807 165 PNGVDTERFSPDLDA------------------RARLREELGLPEDTFLIGIVARLHPQKDHATLLRAAALLLKK--FPN 224 (365)
T ss_pred CCCcCHHhcCCcccc------------------hHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHHHHHHHh--CCC
Confidence 999998877643211 111223344456778999999999999999999999998653 445
Q ss_pred EEE-EEecCCCCcccchhhHHHHHHHHHHHH-HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHH
Q 001541 509 LTL-IMGNRDGIDEMSSTSASVLLSVLKLID-KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIE 586 (1057)
Q Consensus 509 l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~-~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lE 586 (1057)
+.+ ++|.++.. ..+..... .+++.++|.|.|. .+++..+|+.| |++|+|+..|+||++++|
T Consensus 225 ~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a----di~v~ps~~e~~~~~~~E 287 (365)
T cd03807 225 ARLLLVGDGPDR-----------ANLELLALKELGLEDKVILLGE--RSDVPALLNAL----DVFVLSSLSEGFPNVLLE 287 (365)
T ss_pred eEEEEecCCcch-----------hHHHHHHHHhcCCCceEEEccc--cccHHHHHHhC----CEEEeCCccccCCcHHHH
Confidence 665 67876642 22333444 7788889999996 57899999999 999999999999999999
Q ss_pred HHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 001541 587 AAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 587 AmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~ 665 (1057)
||+||+|||+++.|+..+++.+ +|+++++.|+++++++|.+++++++.+.++++++++.+ ++|||+..+++|.++|+
T Consensus 288 a~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 365 (365)
T cd03807 288 AMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALLADPALRQALGEAARERIEENFSIEAMVEAYEELYR 365 (365)
T ss_pred HHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 9999999999999999999876 89999999999999999999999999999999999999 68999999999999874
No 51
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=100.00 E-value=1.7e-30 Score=298.06 Aligned_cols=346 Identities=20% Similarity=0.245 Sum_probs=244.8
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCccccc
Q 001541 189 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYI 268 (1057)
Q Consensus 189 d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l 268 (1057)
..||.++++.+|+++|.+.| |+|++++.... +... .. .....+..++....
T Consensus 10 ~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~-~~~~-----~~-----------------~~~~~~~~~~~~~~---- 60 (360)
T cd04951 10 GLGGAEKQVVDLADQFVAKG--HQVAIISLTGE-SEVK-----PP-----------------IDATIILNLNMSKN---- 60 (360)
T ss_pred CCCCHHHHHHHHHHhcccCC--ceEEEEEEeCC-CCcc-----ch-----------------hhccceEEeccccc----
Confidence 37999999999999999999 99999986421 1000 00 00111112221110
Q ss_pred ccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhc-CCCCEEEEecCCchhhHHHH
Q 001541 269 AKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQL 347 (1057)
Q Consensus 269 ~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l 347 (1057)
.+.++ ..+..+.+.+.+ .+||+||+|...+..++.++... .++|+|+|.|+......
T Consensus 61 ----~~~~~--------~~~~~~~~~~~~-------~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~--- 118 (360)
T cd04951 61 ----PLSFL--------LALWKLRKILRQ-------FKPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGR--- 118 (360)
T ss_pred ----chhhH--------HHHHHHHHHHHh-------cCCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhH---
Confidence 11111 111112222222 57999999987666555554433 46799999998743210
Q ss_pred HHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEE
Q 001541 348 LKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAI 427 (1057)
Q Consensus 348 ~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~V 427 (1057)
...+. .+.....++.++++|....+.+.... +.+..++.+
T Consensus 119 -------------~~~~~-----~~~~~~~~~~~~~~s~~~~~~~~~~~----------------------~~~~~~~~~ 158 (360)
T cd04951 119 -------------LRMLA-----YRLTDFLSDLTTNVSKEALDYFIASK----------------------AFNANKSFV 158 (360)
T ss_pred -------------HHHHH-----HHHHhhccCceEEEcHHHHHHHHhcc----------------------CCCcccEEE
Confidence 00111 12234457778888877666554321 112238999
Q ss_pred eCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC
Q 001541 428 IPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA 507 (1057)
Q Consensus 428 IpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~ 507 (1057)
||||+|...|.+... ........+...+++++++++||+.+.||++.+++|+.++.+.. +
T Consensus 159 i~ng~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~--~ 218 (360)
T cd04951 159 VYNGIDTDRFRKDPA------------------RRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDY--L 218 (360)
T ss_pred EccccchhhcCcchH------------------HHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHHHHHHHHHHhhC--C
Confidence 999999887764211 11122233444567889999999999999999999999986533 4
Q ss_pred cEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHH
Q 001541 508 NLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIE 586 (1057)
Q Consensus 508 ~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lE 586 (1057)
++.+ |+|+++. ...+.+.+..+++.++|.|+|. .+++..+|+.| |++|+||..|+||++++|
T Consensus 219 ~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a----d~~v~~s~~e~~~~~~~E 281 (360)
T cd04951 219 DIKLLIAGDGPL-----------RATLERLIKALGLSNRVKLLGL--RDDIAAYYNAA----DLFVLSSAWEGFGLVVAE 281 (360)
T ss_pred CeEEEEEcCCCc-----------HHHHHHHHHhcCCCCcEEEecc--cccHHHHHHhh----ceEEecccccCCChHHHH
Confidence 5664 7888765 3557778888888889999997 47899999999 999999999999999999
Q ss_pred HHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHH
Q 001541 587 AAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRI 664 (1057)
Q Consensus 587 AmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~ 664 (1057)
|||+|+|||+++.|+..|++.+ +|++++++|+++++++|.++++ +++.+..++.+ ++.+ +.|||+.++++|.++|
T Consensus 282 a~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 282 AMACELPVVATDAGGVREVVGD--SGLIVPISDPEALANKIDEILKMSGEERDIIGAR-RERIVKKFSINSIVQQWLTLY 358 (360)
T ss_pred HHHcCCCEEEecCCChhhEecC--CceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHh
Confidence 9999999999999999999875 8999999999999999999995 56666666655 6666 7999999999999998
Q ss_pred H
Q 001541 665 A 665 (1057)
Q Consensus 665 ~ 665 (1057)
.
T Consensus 359 ~ 359 (360)
T cd04951 359 T 359 (360)
T ss_pred h
Confidence 6
No 52
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=100.00 E-value=1.8e-32 Score=298.45 Aligned_cols=242 Identities=22% Similarity=0.388 Sum_probs=180.9
Q ss_pred ceEEEEEecCCCC-Cc--chHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEec
Q 001541 774 KHIFVISVDCDST-TG--LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 850 (1057)
Q Consensus 774 kkLi~~DiDGTL~-~~--i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~ 850 (1057)
++||++|+||||. .. ......+.++ ... .+++.|+++|||++.++.+++++.+++ .||++||++|+.||+.
T Consensus 2 ~~ll~sDlD~Tl~~~~~~~~~~l~~~l~-~~~---~~~~~~v~~TGRs~~~~~~~~~~~~l~--~Pd~~I~svGt~I~~~ 75 (247)
T PF05116_consen 2 PRLLASDLDGTLIDGDDEALARLEELLE-QQA---RPEILFVYVTGRSLESVLRLLREYNLP--QPDYIITSVGTEIYYG 75 (247)
T ss_dssp SEEEEEETBTTTBHCHHHHHHHHHHHHH-HHH---CCGEEEEEE-SS-HHHHHHHHHHCT-E--E-SEEEETTTTEEEES
T ss_pred CEEEEEECCCCCcCCCHHHHHHHHHHHH-Hhh---CCCceEEEECCCCHHHHHHHHHhCCCC--CCCEEEecCCeEEEEc
Confidence 6899999999997 22 1223333333 112 368999999999999999999999984 5899999999999994
Q ss_pred cCCCCCCCccccccchhhcccccchhhHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCCCCccHHHHH
Q 001541 851 TLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELR 930 (1057)
Q Consensus 851 ~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~ 930 (1057)
. ...+|..|..++...|..+.+++++..+++...+. ...+..||++|++........+++|+
T Consensus 76 ~------~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l~~q~------------~~~q~~~k~sy~~~~~~~~~~~~~i~ 137 (247)
T PF05116_consen 76 E------NWQPDEEWQAHIDERWDRERVEEILAELPGLRPQP------------ESEQRPFKISYYVDPDDSADILEEIR 137 (247)
T ss_dssp S------TTEE-HHHHHHHHTT--HHHHHHHHHCHCCEEEGG------------CCCGCCTCECEEEETTSHCHHHHHHH
T ss_pred C------CCcChHHHHHHHHhcCChHHHHHHHHHhhCcccCC------------ccccCCeeEEEEEecccchhHHHHHH
Confidence 3 56788999999999999999998888877644433 35677899999986554444478899
Q ss_pred HHHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCCchhh
Q 001541 931 KVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSS 1010 (1057)
Q Consensus 931 ~~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~~~~ 1010 (1057)
+.+.+.+.++++++|++. ++||+|+++|||.||+||+++|+++++++++ +||++| | ++||..+..||+|+||..+.
T Consensus 138 ~~l~~~~l~~~~i~s~~~-~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~-aGDSgN-D-~~mL~~~~~~vvV~Na~~e~ 213 (247)
T PF05116_consen 138 ARLRQRGLRVNVIYSNGR-DLDILPKGASKGAALRYLMERWGIPPEQVLV-AGDSGN-D-LEMLEGGDHGVVVGNAQPEL 213 (247)
T ss_dssp HHHHCCTCEEEEEECTCC-EEEEEETT-SHHHHHHHHHHHHT--GGGEEE-EESSGG-G-HHHHCCSSEEEE-TTS-HHH
T ss_pred HHHHHcCCCeeEEEccce-eEEEccCCCCHHHHHHHHHHHhCCCHHHEEE-EeCCCC-c-HHHHcCcCCEEEEcCCCHHH
Confidence 999999999999999885 9999999999999999999999999999999 899999 9 99999999999999999431
Q ss_pred hh-hhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHHhCc
Q 001541 1011 SN-QIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGL 1054 (1057)
Q Consensus 1011 ~~-~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~~g~ 1054 (1057)
-. ...... ...-.|++....++||.++|+|||+
T Consensus 214 ~~~~~~~~~-----------~~~~iy~a~~~~a~GIlegl~~~~~ 247 (247)
T PF05116_consen 214 LSWLLEKLR-----------QQERIYFAQGPYAAGILEGLQHFGF 247 (247)
T ss_dssp HHHHHHCC------------TTE--EE-SS-THHHHHHHHHHTTT
T ss_pred HHHHHHhcc-----------cCCceEecCCCCcHHHHHHHHHcCC
Confidence 01 111111 1122456677889999999999986
No 53
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=100.00 E-value=1.9e-30 Score=294.20 Aligned_cols=372 Identities=26% Similarity=0.349 Sum_probs=270.3
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcccc
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
||++|+.... |..||...++..|+++|.+.| |+|++++............
T Consensus 1 kI~ii~~~~~-----------~~~~G~~~~~~~l~~~L~~~g--~~v~i~~~~~~~~~~~~~~----------------- 50 (374)
T cd03801 1 KILLVTPEYP-----------PSVGGAERHVLELARALAARG--HEVTVLTPGDGGLPDEEEV----------------- 50 (374)
T ss_pred CeeEEecccC-----------CccCcHhHHHHHHHHHHHhcC--ceEEEEecCCCCCCceeee-----------------
Confidence 5888885443 346999999999999999998 9999998864322110000
Q ss_pred ccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHh
Q 001541 247 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSG 326 (1057)
Q Consensus 247 ~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~ 326 (1057)
.......... .. . .... . ..........+.+.+ .+||+||+|++........+++
T Consensus 51 -----~~~~~~~~~~-~~-----~---~~~~-~---~~~~~~~~~~~~~~~-------~~~Dii~~~~~~~~~~~~~~~~ 105 (374)
T cd03801 51 -----GGIVVVRPPP-LL-----R---VRRL-L---LLLLLALRLRRLLRR-------ERFDVVHAHDWLALLAAALAAR 105 (374)
T ss_pred -----cCcceecCCc-cc-----c---cchh-H---HHHHHHHHHHHHhhh-------cCCcEEEEechhHHHHHHHHHH
Confidence 0000000000 00 0 0000 0 000111111122222 5799999999866555556777
Q ss_pred cCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHH
Q 001541 327 ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK 406 (1057)
Q Consensus 327 ~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~ 406 (1057)
..++|++++.|+......... ......... ..+...+..+|.+++.|....+.+...+..
T Consensus 106 ~~~~~~i~~~h~~~~~~~~~~----------~~~~~~~~~--~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~-------- 165 (374)
T cd03801 106 LLGIPLVLTVHGLEFGRPGNE----------LGLLLKLAR--ALERRALRRADRIIAVSEATREELRELGGV-------- 165 (374)
T ss_pred hcCCcEEEEeccchhhccccc----------hhHHHHHHH--HHHHHHHHhCCEEEEecHHHHHHHHhcCCC--------
Confidence 889999999999866432110 000111111 135668999999999999887776554322
Q ss_pred HHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCC
Q 001541 407 LRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDP 486 (1057)
Q Consensus 407 l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~ 486 (1057)
...++.++|||+|...+.+.. ...........+++.|+++|++.+
T Consensus 166 --------------~~~~~~~i~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~i~~~g~~~~ 210 (374)
T cd03801 166 --------------PPEKITVIPNGVDTERFRPAP---------------------RAARRRLGIPEDEPVILFVGRLVP 210 (374)
T ss_pred --------------CCCcEEEecCcccccccCccc---------------------hHHHhhcCCcCCCeEEEEecchhh
Confidence 113899999999998775421 001111222456789999999999
Q ss_pred CCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhh
Q 001541 487 KKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAA 565 (1057)
Q Consensus 487 ~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa 565 (1057)
.||++.+++|+..+.... +++.+ ++|+++. ...+..++.+++...+|.|.|+++.+++..+|+.|
T Consensus 211 ~k~~~~~i~~~~~~~~~~--~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~- 276 (374)
T cd03801 211 RKGVDLLLEALAKLRKEY--PDVRLVIVGDGPL-----------REELEALAAELGLGDRVTFLGFVPDEDLPALYAAA- 276 (374)
T ss_pred hcCHHHHHHHHHHHhhhc--CCeEEEEEeCcHH-----------HHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhc-
Confidence 999999999999987533 45665 6775543 45667777888888999999999999999999999
Q ss_pred cCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 001541 566 KTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGL 645 (1057)
Q Consensus 566 ~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~ 645 (1057)
|++++|+..|++|++++|||++|+|||+++.++..+++.++.+|+++++.|+++++++|.+++.+++.+.+++++++
T Consensus 277 ---di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~ 353 (374)
T cd03801 277 ---DVFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPELRRRLGEAAR 353 (374)
T ss_pred ---CEEEecchhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcChHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988999999999999999999999999999999999999
Q ss_pred HHh-hcCCHHHHHHHHHHHHH
Q 001541 646 KNI-HLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 646 ~~v-~~fsw~~~a~~~l~~~~ 665 (1057)
+.+ +.|+|+.+++++.++|+
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~ 374 (374)
T cd03801 354 ERVAERFSWDRVAARTEEVYY 374 (374)
T ss_pred HHHHHhcCHHHHHHHHHHhhC
Confidence 777 79999999999998873
No 54
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=100.00 E-value=4.3e-31 Score=302.47 Aligned_cols=363 Identities=23% Similarity=0.316 Sum_probs=257.9
Q ss_pred EEEEEecccccccCCcCCCCCC-CCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccc
Q 001541 167 YIVLISIHGLIRGENMELGRDS-DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 245 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~-d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1057)
||++++.+.. + ..||+++|+.+|+++|++.| |.|++++.............
T Consensus 1 ~ili~~~~~~-----------~~~~gG~~~~~~~l~~~L~~~~--~~v~~~~~~~~~~~~~~~~~--------------- 52 (365)
T cd03809 1 RILIDARFLA-----------SRRPTGIGRYARELLRALLKLD--PEEVLLLLPGAPGLLLLPLR--------------- 52 (365)
T ss_pred CEEEechhhh-----------cCCCCcHHHHHHHHHHHHHhcC--CceEEEEecCccccccccch---------------
Confidence 5777774443 4 68999999999999999999 99999988653221110000
Q ss_pred cccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHH
Q 001541 246 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 325 (1057)
Q Consensus 246 ~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~ 325 (1057)
..... ... ......+............ .+. ..+||+||++++.....
T Consensus 53 ------~~~~~--~~~------~~~~~~~~~~~~~~~~~~~-------~~~-------~~~~Dii~~~~~~~~~~----- 99 (365)
T cd03809 53 ------AALRL--LLR------LPRRLLWGLLFLLRAGDRL-------LLL-------LLGLDLLHSPHNTAPLL----- 99 (365)
T ss_pred ------hcccc--ccc------cccccccchhhHHHHHHHH-------Hhh-------hcCCCeeeecccccCcc-----
Confidence 00000 000 0011111111111111111 111 15699999998754443
Q ss_pred hcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHH
Q 001541 326 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1057)
Q Consensus 326 ~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~ 405 (1057)
+..++|+|+++|++.+......... ......+. .++.++..+|.+++.|+...+.+...+.. .+
T Consensus 100 ~~~~~~~i~~~hd~~~~~~~~~~~~---------~~~~~~~~--~~~~~~~~~d~~i~~s~~~~~~~~~~~~~-~~---- 163 (365)
T cd03809 100 RLRGVPVVVTIHDLIPLRFPEYFSP---------GFRRYFRR--LLRRALRRADAIITVSEATKRDLLRYLGV-PP---- 163 (365)
T ss_pred cCCCCCEEEEeccchhhhCcccCCH---------HHHHHHHH--HHHHHHHHcCEEEEccHHHHHHHHHHhCc-CH----
Confidence 5679999999999866443221110 01112222 35668999999999999888877665432 12
Q ss_pred HHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCC
Q 001541 406 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 485 (1057)
Q Consensus 406 ~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~ 485 (1057)
.++.++|||+|...+.+.... . .......++++.|+++||+.
T Consensus 164 -----------------~~~~vi~~~~~~~~~~~~~~~------------------~---~~~~~~~~~~~~i~~~G~~~ 205 (365)
T cd03809 164 -----------------DKIVVIPLGVDPRFRPPPAEA------------------E---VLRALYLLPRPYFLYVGTIE 205 (365)
T ss_pred -----------------HHEEeeccccCccccCCCchH------------------H---HHHHhcCCCCCeEEEeCCCc
Confidence 289999999998877542110 0 12223346788999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhh
Q 001541 486 PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAA 565 (1057)
Q Consensus 486 ~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa 565 (1057)
+.||++.+++++..+....+...+ +++|.++... ......+.+.++..+|.|.|+++.+++..+|+.|
T Consensus 206 ~~K~~~~~l~~~~~~~~~~~~~~l-~i~G~~~~~~----------~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~- 273 (365)
T cd03809 206 PRKNLERLLEAFARLPAKGPDPKL-VIVGKRGWLN----------EELLARLRELGLGDRVRFLGYVSDEELAALYRGA- 273 (365)
T ss_pred cccCHHHHHHHHHHHHHhcCCCCE-EEecCCcccc----------HHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhh-
Confidence 999999999999999754332233 4667655421 1222333667888999999999999999999999
Q ss_pred cCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 001541 566 KTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGL 645 (1057)
Q Consensus 566 ~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~ 645 (1057)
|++++||..|+||++++||||+|+|||+++.|+..|++. .+|+++++.|.++++++|.+++++++.+.+++++++
T Consensus 274 ---d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~ 348 (365)
T cd03809 274 ---RAFVFPSLYEGFGLPVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALAAAIERLLEDPALREELRERGL 348 (365)
T ss_pred ---hhhcccchhccCCCCHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999874 579999999999999999999999999999999999
Q ss_pred HHhhcCCHHHHHHHHH
Q 001541 646 KNIHLFSWPEHCKTYL 661 (1057)
Q Consensus 646 ~~v~~fsw~~~a~~~l 661 (1057)
+.+++|+|+.++++|+
T Consensus 349 ~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 349 ARAKRFSWEKTARRTL 364 (365)
T ss_pred HHHHhCCHHHHHHHHh
Confidence 8789999999999886
No 55
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=100.00 E-value=2.2e-30 Score=296.76 Aligned_cols=356 Identities=21% Similarity=0.239 Sum_probs=250.6
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcccc
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
||++|+... |..||.++++.+|+++|++.| |+|++++.....+....
T Consensus 1 kI~~v~~~~------------~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~~------------------- 47 (366)
T cd03822 1 RIALVSPYP------------PRKCGIATFTTDLVNALSARG--PDVLVVSVAALYPSLLY------------------- 47 (366)
T ss_pred CeEEecCCC------------CCCCcHHHHHHHHHHHhhhcC--CeEEEEEeecccCcccC-------------------
Confidence 688997432 568999999999999999999 99999986542211100
Q ss_pred ccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC---chHH---
Q 001541 247 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYAD---AGDS--- 320 (1057)
Q Consensus 247 ~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~---~~~~--- 320 (1057)
........... . .. + .....+... +.. .+||+||++.+. ....
T Consensus 48 -~~~~~~~~~~~-~----------~~--~---~~~~~~~~~-------~~~-------~~~dii~~~~~~~~~~~~~~~~ 96 (366)
T cd03822 48 -GGEQEVVRVIV-L----------DN--P---LDYRRAARA-------IRL-------SGPDVVVIQHEYGIFGGEAGLY 96 (366)
T ss_pred -CCcccceeeee-c----------CC--c---hhHHHHHHH-------Hhh-------cCCCEEEEeeccccccchhhHH
Confidence 00000111110 0 00 0 001111111 111 579999998731 1222
Q ss_pred HHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCC
Q 001541 321 AALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFD 400 (1057)
Q Consensus 321 a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~ 400 (1057)
...+.+..++|+|++.|+...... . . ...+ .++..++.+|.|+++|.....+......
T Consensus 97 ~~~~~~~~~~~~i~~~h~~~~~~~----------~----~---~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~--- 154 (366)
T cd03822 97 LLLLLRGLGIPVVVTLHTVLLHEP----------R----P---GDRA--LLRLLLRRADAVIVMSSELLRALLLRAY--- 154 (366)
T ss_pred HHHHHhhcCCCEEEEEecCCcccc----------c----h---hhhH--HHHHHHhcCCEEEEeeHHHHHHHHhhcC---
Confidence 222234579999999999721110 0 0 0011 2345688999999997444443322111
Q ss_pred hHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEE
Q 001541 401 PVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILA 480 (1057)
Q Consensus 401 ~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~ 480 (1057)
..++.+||||++...+.+... ........++++|++
T Consensus 155 ---------------------~~~~~~i~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~i~~ 190 (366)
T cd03822 155 ---------------------PEKIAVIPHGVPDPPAEPPES-----------------------LKALGGLDGRPVLLT 190 (366)
T ss_pred ---------------------CCcEEEeCCCCcCcccCCchh-----------------------hHhhcCCCCCeEEEE
Confidence 128999999999876653210 012223456789999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCC-CCCCcHH
Q 001541 481 LARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH-HKQSDVP 558 (1057)
Q Consensus 481 vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~-v~~~dl~ 558 (1057)
+||+.+.||++.+++|+..+... .+++.+ |+|++....... .....+++.++++.++|.|.|. ++.+++.
T Consensus 191 ~G~~~~~K~~~~ll~a~~~~~~~--~~~~~l~i~G~~~~~~~~~------~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~ 262 (366)
T cd03822 191 FGLLRPYKGLELLLEALPLLVAK--HPDVRLLVAGETHPDLERY------RGEAYALAERLGLADRVIFINRYLPDEELP 262 (366)
T ss_pred EeeccCCCCHHHHHHHHHHHHhh--CCCeEEEEeccCccchhhh------hhhhHhHHHhcCCCCcEEEecCcCCHHHHH
Confidence 99999999999999999998753 345564 778765422110 1111145788899999999987 9999999
Q ss_pred HHHHHhhcCCcEEEEcCCCC--CCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHH
Q 001541 559 EIYRLAAKTKGVFINPAFIE--PFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQL 636 (1057)
Q Consensus 559 ~ly~~Aa~~~dv~v~ps~~E--gfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~ 636 (1057)
.+|+.| |++++|+..| +||++++||||||+|||+++.|+ .+.+.+..+|+++++.|+++++++|.+++++++.
T Consensus 263 ~~~~~a----d~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~~~ 337 (366)
T cd03822 263 ELFSAA----DVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADPEL 337 (366)
T ss_pred HHHhhc----CEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcChHH
Confidence 999999 9999999999 99999999999999999999999 6777778899999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 001541 637 WARCRQNGLKNIHLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 637 ~~~~~~~~~~~v~~fsw~~~a~~~l~~~~ 665 (1057)
+.++++++++.++.|||+.++++|.++|+
T Consensus 338 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 366 (366)
T cd03822 338 AQALRARAREYARAMSWERVAERYLRLLA 366 (366)
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHhC
Confidence 99999999999977999999999999873
No 56
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=100.00 E-value=2e-30 Score=292.70 Aligned_cols=344 Identities=23% Similarity=0.306 Sum_probs=251.2
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcccc
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
||++++.... + .||.++++.+|+++|.+.| |+|++++..... ...+
T Consensus 1 kI~i~~~~~~-----------~-~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~---~~~~----------------- 46 (348)
T cd03820 1 KILFVIPSLG-----------N-AGGAERVLSNLANALAEKG--HEVTIISLDKGE---PPFY----------------- 46 (348)
T ss_pred CeEEEecccc-----------C-CCChHHHHHHHHHHHHhCC--CeEEEEecCCCC---CCcc-----------------
Confidence 5788874332 3 8999999999999999998 999999886432 0000
Q ss_pred ccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHh
Q 001541 247 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSG 326 (1057)
Q Consensus 247 ~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~ 326 (1057)
...+++.+..++..... ..+..+ .+...+ .+.+.+ .+||+||++.+..... ....
T Consensus 47 --~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~-------~~~l~~-------~~~d~i~~~~~~~~~~--~~~~ 101 (348)
T cd03820 47 --ELDPKIKVIDLGDKRDS------KLLARF-KKLRRL-------RKLLKN-------NKPDVVISFLTSLLTF--LASL 101 (348)
T ss_pred --ccCCccceeeccccccc------chhccc-cchHHH-------HHhhcc-------cCCCEEEEcCchHHHH--HHHH
Confidence 11235566655543220 000000 001111 111111 5799999998752122 2222
Q ss_pred cCC-CCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHH
Q 001541 327 ALN-VPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1057)
Q Consensus 327 ~~~-iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~ 405 (1057)
..+ +|++++.|+......... .....++..++.+|.+++.|+........
T Consensus 102 ~~~~~~~i~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~d~ii~~s~~~~~~~~~----------- 152 (348)
T cd03820 102 GLKIVKLIVSEHNSPDAYKKRL------------------RRLLLRRLLYRRADAVVVLTEEDRALYYK----------- 152 (348)
T ss_pred hhccccEEEecCCCccchhhhh------------------HHHHHHHHHHhcCCEEEEeCHHHHHHhhc-----------
Confidence 234 599999998754332110 00003566899999999999886522111
Q ss_pred HHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCC
Q 001541 406 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 485 (1057)
Q Consensus 406 ~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~ 485 (1057)
.+..++.++|||++...+.+. ...+++.|+++|++.
T Consensus 153 --------------~~~~~~~vi~~~~~~~~~~~~------------------------------~~~~~~~i~~~g~~~ 188 (348)
T cd03820 153 --------------KFNKNVVVIPNPLPFPPEEPS------------------------------SDLKSKRILAVGRLV 188 (348)
T ss_pred --------------cCCCCeEEecCCcChhhcccc------------------------------CCCCCcEEEEEEeec
Confidence 112389999999998766432 124578999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHh
Q 001541 486 PKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLA 564 (1057)
Q Consensus 486 ~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~A 564 (1057)
+.||++.+++|+..+.+ ..+++.+ ++|.+++ ...+.+++.++++.++|.|.|. .+++..+|+.|
T Consensus 189 ~~K~~~~l~~~~~~l~~--~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a 253 (348)
T cd03820 189 PQKGFDLLIEAWAKIAK--KHPDWKLRIVGDGPE-----------REALEALIKELGLEDRVILLGF--TKNIEEYYAKA 253 (348)
T ss_pred cccCHHHHHHHHHHHHh--cCCCeEEEEEeCCCC-----------HHHHHHHHHHcCCCCeEEEcCC--cchHHHHHHhC
Confidence 99999999999999965 3455554 7787765 3456667888999999999998 78999999999
Q ss_pred hcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCC-CchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 001541 565 AKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG-GPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQN 643 (1057)
Q Consensus 565 a~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~G-g~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~ 643 (1057)
|++|+||..|+||++++|||+||+|||+++.+ +..+++.++.+|+++++.|+++++++|.+++++++.+++++++
T Consensus 254 ----d~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~ 329 (348)
T cd03820 254 ----SIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDEELRKRMGAN 329 (348)
T ss_pred ----CEEEeCccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 99999999999999999999999999999964 5677777777999999999999999999999999999999999
Q ss_pred HHHHhhcCCHHHHHHHHH
Q 001541 644 GLKNIHLFSWPEHCKTYL 661 (1057)
Q Consensus 644 ~~~~v~~fsw~~~a~~~l 661 (1057)
+++.+++|+|+.++++|.
T Consensus 330 ~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 330 ARESAERFSIENIIKQWE 347 (348)
T ss_pred HHHHHHHhCHHHHHHHhc
Confidence 987779999999999885
No 57
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=3.4e-31 Score=310.27 Aligned_cols=284 Identities=19% Similarity=0.195 Sum_probs=207.6
Q ss_pred CcceEEEEcCCCchHHHHHHH-hcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHH--HHHHHHHHHhhcCCEE
Q 001541 305 VWPVAIHGHYADAGDSAALLS-GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIM--RRIEAEELSLDASEIV 381 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~-~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~--~ri~~E~~~l~~ad~V 381 (1057)
.++|+||+++...+.. +. ...++|+|++.|++....+.+......... ...|++. .....|+.+++.+|.|
T Consensus 103 ~~~D~v~~~~~~~~~~---~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~e~~~~~~ad~v 176 (397)
T TIGR03087 103 EPVDAIVVFSSAMAQY---VTPHVRGVPRIVDFVDVDSDKWLQYARTKRWPL---RWIYRREGRLLLAYERAIAARFDAA 176 (397)
T ss_pred CCCCEEEEecccccee---ccccccCCCeEeehhhHHHHHHHHHHhccCcch---hHHHHHHHHHHHHHHHHHHhhCCeE
Confidence 5699999987533222 22 345899999999986655444322211111 1222211 1122588899999999
Q ss_pred EecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCc
Q 001541 382 ITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPP 461 (1057)
Q Consensus 382 i~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~ 461 (1057)
+++|+.+.+.+...+.. ...++.+||||+|.+.|.+..... .
T Consensus 177 i~~S~~~~~~l~~~~~~----------------------~~~~v~vipngvd~~~f~~~~~~~--------------~-- 218 (397)
T TIGR03087 177 TFVSRAEAELFRRLAPE----------------------AAGRITAFPNGVDADFFSPDRDYP--------------N-- 218 (397)
T ss_pred EEcCHHHHHHHHHhCCC----------------------CCCCeEEeecccchhhcCCCcccc--------------C--
Confidence 99999888776443221 123799999999999887532110 0
Q ss_pred hHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHH----HHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHH
Q 001541 462 IWSEIMRFFTNPRKPVILALARPDPKKNITTLVK----AFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKL 536 (1057)
Q Consensus 462 ~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~----A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l 536 (1057)
. ..+++++|+|+||+++.||++.++. ++..+.+ ..+++.+ |+|+++. ..
T Consensus 219 ------~--~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~--~~p~~~l~ivG~g~~------------~~---- 272 (397)
T TIGR03087 219 ------P--YPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRA--RRPAAEFYIVGAKPS------------PA---- 272 (397)
T ss_pred ------C--CCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHH--HCCCcEEEEECCCCh------------HH----
Confidence 0 1245689999999999999999984 4444543 2355664 7888763 11
Q ss_pred HHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCC-CCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEe
Q 001541 537 IDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLV 615 (1057)
Q Consensus 537 ~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~-~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv 615 (1057)
+.++...++|.|.|+++ ++..+|+.| |++|+||. .||+|++++||||||+|||+|+.|+. .+....++|+++
T Consensus 273 ~~~l~~~~~V~~~G~v~--~~~~~~~~a----dv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv 345 (397)
T TIGR03087 273 VRALAALPGVTVTGSVA--DVRPYLAHA----AVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLV 345 (397)
T ss_pred HHHhccCCCeEEeeecC--CHHHHHHhC----CEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEe
Confidence 22334456799999985 799999999 99999996 69999999999999999999997643 333345678988
Q ss_pred CCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHc
Q 001541 616 DPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAG 666 (1057)
Q Consensus 616 ~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~~ 666 (1057)
. .|+++++++|.++++|+++++++++++++.+ ++|||+.+++++.++|..
T Consensus 346 ~-~~~~~la~ai~~ll~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~~ 396 (397)
T TIGR03087 346 A-ADPADFAAAILALLANPAEREELGQAARRRVLQHYHWPRNLARLDALLEQ 396 (397)
T ss_pred C-CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcC
Confidence 6 8999999999999999999999999999999 699999999999999864
No 58
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=100.00 E-value=5e-31 Score=303.08 Aligned_cols=345 Identities=21% Similarity=0.198 Sum_probs=245.7
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccc
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 245 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1057)
|||++++.. +..||.++++..++++|.++| |+|++++...
T Consensus 1 MkIl~~~~~-------------~~~gG~~~~~~~l~~~l~~~G--~~v~v~~~~~------------------------- 40 (365)
T cd03825 1 MKVLHLNTS-------------DISGGAARAAYRLHRALQAAG--VDSTMLVQEK------------------------- 40 (365)
T ss_pred CeEEEEecC-------------CCCCcHHHHHHHHHHHHHhcC--CceeEEEeec-------------------------
Confidence 799999732 236899999999999999999 9999997642
Q ss_pred cccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHH
Q 001541 246 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 325 (1057)
Q Consensus 246 ~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~ 325 (1057)
. . +...+ ...+|||||+|+...+.+.....
T Consensus 41 -------~----------~-------------------~~~~~--------------~~~~~diih~~~~~~~~~~~~~~ 70 (365)
T cd03825 41 -------K----------A-------------------LISKI--------------EIINADIVHLHWIHGGFLSIEDL 70 (365)
T ss_pred -------c----------h-------------------hhhCh--------------hcccCCEEEEEccccCccCHHHH
Confidence 0 0 00000 01569999999864433333322
Q ss_pred hc--CCCCEEEEecCCchhhHHHHHHh---------hhc--c--hHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHH
Q 001541 326 GA--LNVPMLFTGHSLGRDKLEQLLKQ---------ARL--S--RDEINATYKIMRRIEAEELSLDASEIVITSTRQEIE 390 (1057)
Q Consensus 326 ~~--~~iP~V~t~H~l~~~~~~~l~~~---------g~~--~--~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~ 390 (1057)
.. .++|+|+|.|+.+.......... +.. . ...........++. .......++.++++|+...+
T Consensus 71 ~~~~~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~s~~~~~ 148 (365)
T cd03825 71 SKLLDRKPVVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRK--RKAWADLNLTIVAPSRWLAD 148 (365)
T ss_pred HHHHcCCCEEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHH--HHHhccCCcEEEehhHHHHH
Confidence 22 39999999998754321100000 000 0 00000011111111 11223567788888877655
Q ss_pred HHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhh
Q 001541 391 EQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFF 470 (1057)
Q Consensus 391 ~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (1057)
.+...+. .+..++.|||||+|.+.|.+... ......+.
T Consensus 149 ~~~~~~~----------------------~~~~~~~vi~ngi~~~~~~~~~~--------------------~~~~~~~~ 186 (365)
T cd03825 149 CARSSSL----------------------FKGIPIEVIPNGIDTTIFRPRDK--------------------REARKRLG 186 (365)
T ss_pred HHHhccc----------------------cCCCceEEeCCCCcccccCCCcH--------------------HHHHHHhC
Confidence 5433221 11238999999999988764321 11223344
Q ss_pred CCCCCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEE
Q 001541 471 TNPRKPVILALARPDP--KKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVA 547 (1057)
Q Consensus 471 ~~~~~~~Il~vGRl~~--~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~ 547 (1057)
.+++++++++.|+... .||++.+++|+..+... ..+++.+ ++|+++... ..++..+|.
T Consensus 187 ~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~-~~~~~~~~i~G~~~~~~------------------~~~~~~~v~ 247 (365)
T cd03825 187 LPADKKIILFGAVGGTDPRKGFDELIEALKRLAER-WKDDIELVVFGASDPEI------------------PPDLPFPVH 247 (365)
T ss_pred CCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhc-cCCCeEEEEeCCCchhh------------------hccCCCceE
Confidence 4556677777777765 89999999999988642 2356665 667765311 014556899
Q ss_pred eCCCCC-CCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHH
Q 001541 548 YPKHHK-QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADA 626 (1057)
Q Consensus 548 f~g~v~-~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~a 626 (1057)
|+|+++ .+++..+|+.| |++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|+++++++
T Consensus 248 ~~g~~~~~~~~~~~~~~a----d~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~ 323 (365)
T cd03825 248 YLGSLNDDESLALIYSAA----DVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEG 323 (365)
T ss_pred ecCCcCCHHHHHHHHHhC----CEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHH
Confidence 999998 67899999999 9999999999999999999999999999999999999999889999999999999999
Q ss_pred HHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 001541 627 LLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGC 667 (1057)
Q Consensus 627 I~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~~~ 667 (1057)
|.+++++++.+.++++++++.+ ++|||+.++++|+++|+++
T Consensus 324 l~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 324 IEWLLADPDEREELGEAARELAENEFDSRVQAKRYLSLYEEL 365 (365)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 9999999999999999999999 6899999999999999863
No 59
>PRK10125 putative glycosyl transferase; Provisional
Probab=100.00 E-value=1.3e-30 Score=304.77 Aligned_cols=367 Identities=13% Similarity=0.146 Sum_probs=228.5
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccc
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 245 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1057)
|||++|.. ++ ..||+++.+.+|++.|.+.| |+|.++......+....
T Consensus 1 mkil~i~~-~l------------~~GGaeri~~~L~~~l~~~G--~~~~i~~~~~~~~~~~~------------------ 47 (405)
T PRK10125 1 MNILQFNV-RL------------AEGGAAGVALDLHQRALQQG--LASHFVYGYGKGGKESV------------------ 47 (405)
T ss_pred CeEEEEEe-ee------------cCCchhHHHHHHHHHHHhcC--CeEEEEEecCCCccccc------------------
Confidence 89999974 22 37999999999999999999 99999877543222100
Q ss_pred cccCCCCCe-EEEEccCCCcccccccccCCCChh--HHHH-HHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCch---
Q 001541 246 DDMGESSGA-YIIRIPFGPKDKYIAKELLWPHIP--EFVD-GALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAG--- 318 (1057)
Q Consensus 246 ~~~~~~~gv-~i~rip~~p~~~~l~k~~l~~~l~--~f~~-~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~--- 318 (1057)
....+ .++.+ +++ .... -++. .+.+ ..+..+....+.+.+ ..+|||||.|....+
T Consensus 48 ----~~~~~~~~~~~--~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~------~~~pDviHlH~~~~~~~~ 109 (405)
T PRK10125 48 ----SHQNYPQVIKH--TPR--MTAM----ANIALFRLFNRDLFGNFNELYRTITR------TPGPVVLHFHVLHSYWLN 109 (405)
T ss_pred ----ccCCcceEEEe--ccc--HHHH----HHHHHHHhcchhhcchHHHHHHHHhh------ccCCCEEEEecccCceec
Confidence 00111 11111 111 0000 0000 0000 000111111112211 267999999976442
Q ss_pred HH--HHH----HHhcCCCCEEEEecCCchhh-----------HHHHHHhh-h---cchHHHHHHHHH-HHHHHHHHHHhh
Q 001541 319 DS--AAL----LSGALNVPMLFTGHSLGRDK-----------LEQLLKQA-R---LSRDEINATYKI-MRRIEAEELSLD 376 (1057)
Q Consensus 319 ~~--a~~----l~~~~~iP~V~t~H~l~~~~-----------~~~l~~~g-~---~~~~~~~~~yk~-~~ri~~E~~~l~ 376 (1057)
.. ..+ ..+..++|+|+|.|+.+... +..-.... . .+........+. .++...-..+++
T Consensus 110 ~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d~~~~~~~~k~~~~~~~~~ 189 (405)
T PRK10125 110 LKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVDRAHQLVAGKRQLFREMLA 189 (405)
T ss_pred HHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCCCccchHHHHHHHHHHHHHHHhh
Confidence 21 111 12345899999999987431 11000000 0 000001111111 111111122345
Q ss_pred cCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCC
Q 001541 377 ASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPA 456 (1057)
Q Consensus 377 ~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~ 456 (1057)
.++.+|++|+...+.+...+.. .++.|||||||++.+.+.....
T Consensus 190 ~~~~iV~~S~~l~~~~~~~~~~------------------------~~i~vI~NGid~~~~~~~~~~~------------ 233 (405)
T PRK10125 190 LGCQFISPSQHVADAFNSLYGP------------------------GRCRIINNGIDMATEAILAELP------------ 233 (405)
T ss_pred cCcEEEEcCHHHHHHHHHHcCC------------------------CCEEEeCCCcCccccccccccc------------
Confidence 6789999999877765433321 2899999999975432211000
Q ss_pred CCCCchHHHHHhhhCCCCCcEEEEEeC-C-CCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHH
Q 001541 457 SPDPPIWSEIMRFFTNPRKPVILALAR-P-DPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSV 533 (1057)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~Il~vGR-l-~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l 533 (1057)
. ....+++++|+++|+ + .+.||++.+++|+..+. +++.| ++|+++...
T Consensus 234 -~----------~~~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~-----~~~~L~ivG~g~~~~------------- 284 (405)
T PRK10125 234 -P----------VRETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG-----DKIELHTFGKFSPFT------------- 284 (405)
T ss_pred -c----------cccCCCCCEEEEEEeccccCCccHHHHHHHHHhCC-----CCeEEEEEcCCCccc-------------
Confidence 0 001256789999999 3 47899999999999873 24554 778764310
Q ss_pred HHHHHHcCCCCCEEeCCCC-CCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCce
Q 001541 534 LKLIDKYDLYGQVAYPKHH-KQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNG 612 (1057)
Q Consensus 534 ~~l~~~~~l~~~V~f~g~v-~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~G 612 (1057)
..+|.++|+. +..++.++|+.| |+||+||..|+||++++||||||+|||+|+.||++|++.+. +|
T Consensus 285 ---------~~~v~~~g~~~~~~~l~~~y~~a----DvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G 350 (405)
T PRK10125 285 ---------AGNVVNHGFETDKRKLMSALNQM----DALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKS-GG 350 (405)
T ss_pred ---------ccceEEecCcCCHHHHHHHHHhC----CEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cE
Confidence 1357888876 446899999999 99999999999999999999999999999999999999764 89
Q ss_pred EEeCCCCHHHHHHHHHHHHhCHHHHHH----HHHHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 001541 613 LLVDPHDQQSVADALLKLVADKQLWAR----CRQNGLKNI-HLFSWPEHCKTYLSRIAGC 667 (1057)
Q Consensus 613 llv~p~d~~~la~aI~~ll~d~~~~~~----~~~~~~~~v-~~fsw~~~a~~~l~~~~~~ 667 (1057)
++|+|.|+++|++++ ++...++ +..++++.+ +.|||+.++++|+++|+++
T Consensus 351 ~lv~~~d~~~La~~~-----~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 351 KTVSEEEVLQLAQLS-----KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred EEECCCCHHHHHhcc-----CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 999999999999864 3333332 234577777 6899999999999999753
No 60
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.98 E-value=1e-29 Score=288.17 Aligned_cols=347 Identities=26% Similarity=0.329 Sum_probs=256.1
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCcccccc
Q 001541 190 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIA 269 (1057)
Q Consensus 190 ~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l~ 269 (1057)
.||.+.++..|+++|.+.| |+|++++....... .....++.++.++..... .
T Consensus 9 ~~g~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~--~- 60 (359)
T cd03808 9 DGGLYSFRLPLIKALRAAG--YEVHVVAPPGDELE-----------------------ELEALGVKVIPIPLDRRG--I- 60 (359)
T ss_pred chhHHHHHHHHHHHHHhcC--CeeEEEecCCCccc-----------------------ccccCCceEEeccccccc--c-
Confidence 6799999999999999999 99999987642111 011246777777654310 0
Q ss_pred cccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHh-cCCCCEEEEecCCchhhHHHHH
Q 001541 270 KELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSG-ALNVPMLFTGHSLGRDKLEQLL 348 (1057)
Q Consensus 270 k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~-~~~iP~V~t~H~l~~~~~~~l~ 348 (1057)
..+.. +..+..+.+.+.+ .+||+||+|.......+.+.++ ..+.+++++.|+..........
T Consensus 61 --~~~~~--------~~~~~~~~~~~~~-------~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 123 (359)
T cd03808 61 --NPFKD--------LKALLRLYRLLRK-------ERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSGGL 123 (359)
T ss_pred --ChHhH--------HHHHHHHHHHHHh-------cCCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhccchh
Confidence 00111 1111222223332 5799999998766666666655 4567788888887543321100
Q ss_pred HhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEe
Q 001541 349 KQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 428 (1057)
Q Consensus 349 ~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VI 428 (1057)
..++... .++..+..+|.+++.|+...+.+...+... ...++.++
T Consensus 124 ------------~~~~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~---------------------~~~~~~~~ 168 (359)
T cd03808 124 ------------KRRLYLL--LERLALRFTDKVIFQNEDDRDLALKLGIIK---------------------KKKTVLIP 168 (359)
T ss_pred ------------HHHHHHH--HHHHHHhhccEEEEcCHHHHHHHHHhcCCC---------------------cCceEEec
Confidence 1112222 256778899999999998777654432110 01277889
Q ss_pred CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc
Q 001541 429 PPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELAN 508 (1057)
Q Consensus 429 pnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~ 508 (1057)
|+|+|...+.+.... ..++.+.|+++||+.+.||++.+++++..+.. ..++
T Consensus 169 ~~~~~~~~~~~~~~~---------------------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~--~~~~ 219 (359)
T cd03808 169 GSGVDLDRFSPSPEP---------------------------IPEDDPVFLFVARLLKDKGIDELLEAARILKA--KGPN 219 (359)
T ss_pred CCCCChhhcCccccc---------------------------cCCCCcEEEEEeccccccCHHHHHHHHHHHHh--cCCC
Confidence 999998877643210 13567899999999999999999999999864 2345
Q ss_pred EEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHH
Q 001541 509 LTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEA 587 (1057)
Q Consensus 509 l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEA 587 (1057)
+.+ |+|.++..... ... ++..++...+|.|.|+ .+++..+|+.| |++|+|+..|+||++++||
T Consensus 220 ~~l~i~G~~~~~~~~--------~~~--~~~~~~~~~~v~~~g~--~~~~~~~~~~a----di~i~ps~~e~~~~~~~Ea 283 (359)
T cd03808 220 VRLLLVGDGDEENPA--------AIL--EIEKLGLEGRVEFLGF--RDDVPELLAAA----DVFVLPSYREGLPRVLLEA 283 (359)
T ss_pred eEEEEEcCCCcchhh--------HHH--HHHhcCCcceEEEeec--cccHHHHHHhc----cEEEecCcccCcchHHHHH
Confidence 665 77877653221 111 3667777889999998 68999999999 9999999999999999999
Q ss_pred HHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHH
Q 001541 588 AAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYL 661 (1057)
Q Consensus 588 mA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l 661 (1057)
|+||+|||+|+.++..+++.++.+|++++++|+++++++|.+++.+++.+.++++++++.+ ++|||+.++++|+
T Consensus 284 ~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 284 MAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDPELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 9999999999999999999989999999999999999999999999999999999999997 7999999999886
No 61
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.97 E-value=1.1e-29 Score=289.56 Aligned_cols=355 Identities=21% Similarity=0.252 Sum_probs=245.3
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcccc
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
||++|+.... +..+||.++++.+|+++|++.| |+|++++.......... .
T Consensus 1 kIl~i~~~~~----------~~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~~--~---------------- 50 (359)
T cd03823 1 RILVVNHLYP----------PRSVGGAEVVAHDLAEALAKRG--HEVAVLTAGEDPPRQDK--E---------------- 50 (359)
T ss_pred CeeEEcccCC----------cccccchHHHHHHHHHHHHhcC--CceEEEeCCCCCCCccc--c----------------
Confidence 5889984443 1346999999999999999999 99999987642211100 0
Q ss_pred ccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC-chHHHHHHH
Q 001541 247 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYAD-AGDSAALLS 325 (1057)
Q Consensus 247 ~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~-~~~~a~~l~ 325 (1057)
.....+...+.............+.....+.... ...+.+.+.+ .+||+||+|... .+......+
T Consensus 51 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-------~~~dii~~~~~~~~~~~~~~~~ 116 (359)
T cd03823 51 ----VIGVVVYGRPIDEVLRSALPRDLFHLSDYDNPAV---VAEFARLLED-------FRPDVVHFHHLQGLGVSILRAA 116 (359)
T ss_pred ----cccceeeccccccccCCCchhhhhHHHhccCHHH---HHHHHHHHHH-------cCCCEEEECCccchHHHHHHHH
Confidence 0111121111000000000000000000000011 1111122222 569999999863 233334455
Q ss_pred hcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHH
Q 001541 326 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1057)
Q Consensus 326 ~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~ 405 (1057)
+..++|+|++.|+.+...... .......|.++++|+...+.+.....
T Consensus 117 ~~~~~~~i~~~hd~~~~~~~~-------------------------~~~~~~~d~ii~~s~~~~~~~~~~~~-------- 163 (359)
T cd03823 117 RDRGIPIVLTLHDYWLICPRQ-------------------------GLFKKGGDAVIAPSRFLLDRYVANGL-------- 163 (359)
T ss_pred HhcCCCEEEEEeeeeeecchh-------------------------hhhccCCCEEEEeCHHHHHHHHHcCC--------
Confidence 667899999999875422100 00122339999999887666543211
Q ss_pred HHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCC
Q 001541 406 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 485 (1057)
Q Consensus 406 ~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~ 485 (1057)
...++.+||||+|...+.+... ....++++|+++||+.
T Consensus 164 ---------------~~~~~~vi~n~~~~~~~~~~~~---------------------------~~~~~~~~i~~~G~~~ 201 (359)
T cd03823 164 ---------------FAEKISVIRNGIDLDRAKRPRR---------------------------APPGGRLRFGFIGQLT 201 (359)
T ss_pred ---------------CccceEEecCCcChhhcccccc---------------------------CCCCCceEEEEEecCc
Confidence 1238999999999987754221 0135678899999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHh
Q 001541 486 PKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLA 564 (1057)
Q Consensus 486 ~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~A 564 (1057)
+.||++.+++|+..+.+ +++.+ ++|.++.... ..... +...+|.|.|+++.+++..+|+.|
T Consensus 202 ~~k~~~~li~~~~~l~~----~~~~l~i~G~~~~~~~-----------~~~~~---~~~~~v~~~g~~~~~~~~~~~~~a 263 (359)
T cd03823 202 PHKGVDLLLEAFKRLPR----GDIELVIVGNGLELEE-----------ESYEL---EGDPRVEFLGAYPQEEIDDFYAEI 263 (359)
T ss_pred cccCHHHHHHHHHHHHh----cCcEEEEEcCchhhhH-----------HHHhh---cCCCeEEEeCCCCHHHHHHHHHhC
Confidence 99999999999999864 45554 7787764221 11111 556789999999999999999999
Q ss_pred hcCCcEEEEcCC-CCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 001541 565 AKTKGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQN 643 (1057)
Q Consensus 565 a~~~dv~v~ps~-~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~ 643 (1057)
|++++||. .|+||++++||||||+|||+|+.|+..|++.++.+|+++++.|.++++++|.+++++++.++.++++
T Consensus 264 ----d~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~ 339 (359)
T cd03823 264 ----DVLVVPSIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDPDLLERLRAG 339 (359)
T ss_pred ----CEEEEcCcccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhChHHHHHHHHh
Confidence 99999997 7999999999999999999999999999999988999999999999999999999999999999999
Q ss_pred HHHHhhcCCHHHHHHHHHHHHH
Q 001541 644 GLKNIHLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 644 ~~~~v~~fsw~~~a~~~l~~~~ 665 (1057)
+++.... +.++++|+++|+
T Consensus 340 ~~~~~~~---~~~~~~~~~~~~ 358 (359)
T cd03823 340 IEPPRSI---EDQAEEYLKLYR 358 (359)
T ss_pred HHHhhhH---HHHHHHHHHHhh
Confidence 8887644 889999999886
No 62
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.97 E-value=1.5e-29 Score=288.03 Aligned_cols=283 Identities=30% Similarity=0.435 Sum_probs=228.2
Q ss_pred CcceEEEEcCC-CchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEe
Q 001541 305 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 383 (1057)
Q Consensus 305 ~~pDvIh~h~~-~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~ 383 (1057)
.+||+||+|+. .....+..+++..++|++++.|+......... .+.+. .++..+..+|.+++
T Consensus 92 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~---------------~~~~~--~~~~~~~~~d~ii~ 154 (377)
T cd03798 92 FRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRK---------------RLLRA--LLRRALRRADAVIA 154 (377)
T ss_pred CCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCch---------------hhHHH--HHHHHHhcCCeEEe
Confidence 57999999975 45566677778889999999999865432110 01111 24567899999999
Q ss_pred cCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchH
Q 001541 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 463 (1057)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1057)
.|+...+.+...+ .+..++.++|||+|...+.+.....
T Consensus 155 ~s~~~~~~~~~~~-----------------------~~~~~~~~i~~~~~~~~~~~~~~~~------------------- 192 (377)
T cd03798 155 VSEALADELKALG-----------------------IDPEKVTVIPNGVDTERFSPADRAE------------------- 192 (377)
T ss_pred CCHHHHHHHHHhc-----------------------CCCCceEEcCCCcCcccCCCcchHH-------------------
Confidence 9998777665432 1123899999999998876532110
Q ss_pred HHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCC
Q 001541 464 SEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDL 542 (1057)
Q Consensus 464 ~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l 542 (1057)
. .+.....+++.|+++|++.+.||++.+++++..+... .+++.+ ++|.++. ...+.++++++++
T Consensus 193 ~--~~~~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~--~~~~~l~i~g~~~~-----------~~~~~~~~~~~~~ 257 (377)
T cd03798 193 A--RKLGLPEDKKVILFVGRLVPRKGIDYLIEALARLLKK--RPDVHLVIVGDGPL-----------REALEALAAELGL 257 (377)
T ss_pred H--HhccCCCCceEEEEeccCccccCHHHHHHHHHHHHhc--CCCeEEEEEcCCcc-----------hHHHHHHHHhcCC
Confidence 0 1122245678999999999999999999999998653 456665 6677654 3456677778888
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHH
Q 001541 543 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQS 622 (1057)
Q Consensus 543 ~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~ 622 (1057)
.++|.+.|+++.+++..+|+.| |++++|+..|++|++++|||++|+|||+++.|+..+++.++.+|++++++|+++
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~a----d~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~ 333 (377)
T cd03798 258 EDRVTFLGAVPHEEVPAYYAAA----DVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEA 333 (377)
T ss_pred cceEEEeCCCCHHHHHHHHHhc----CeeecchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECCCCHHH
Confidence 8999999999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 001541 623 VADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGC 667 (1057)
Q Consensus 623 la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~~~ 667 (1057)
++++|.+++++++. ++..++++.+ +.|+|+.+++++.++|+++
T Consensus 334 l~~~i~~~~~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 334 LAEAILRLLADPWL--RLGRAARRRVAERFSWENVAERLLELYREV 377 (377)
T ss_pred HHHHHHHHhcCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHhhC
Confidence 99999999999887 6777788877 7999999999999998753
No 63
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=99.97 E-value=3.6e-31 Score=297.16 Aligned_cols=248 Identities=35% Similarity=0.525 Sum_probs=175.5
Q ss_pred CcceEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCC-------C---eeeEEEEecCCCCCCCCCccCCc
Q 001541 163 GKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMP-------G---VYRVDLLTRQVSAPDVDWSYGEP 232 (1057)
Q Consensus 163 ~~~m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~G-------g---v~~V~vit~~~~~~~~~~~y~~~ 232 (1057)
+|-.+|++||+||+++++|| +|| ||||||++||+++|++|.+.+ | .-+|.++|+.+.+.. .....++
T Consensus 270 Pmvf~vvliSpHG~f~q~nv-LG~-pDTGGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd~~-~t~~~q~ 346 (550)
T PF00862_consen 270 PMVFNVVLISPHGYFGQENV-LGR-PDTGGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPDAK-GTTCNQR 346 (550)
T ss_dssp ---SEEEEE--SS--STTST-TSS-TTSSHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TBTT-CGGGTSS
T ss_pred ceeEEEEEEcCccccccccc-cCC-CCCCCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccCCc-CCCcccc
Confidence 34568999999999999999 999 999999999999999998742 1 136999999884322 2333444
Q ss_pred ccccCCCCCCccccccCCCCCeEEEEccCCCc----ccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcce
Q 001541 233 TEMLTPRNSDDFMDDMGESSGAYIIRIPFGPK----DKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPV 308 (1057)
Q Consensus 233 ~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~----~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pD 308 (1057)
.|. +..+++++|+|+||++. ++|++|+.+|||+.+|++.+...+..- + ..+||
T Consensus 347 le~------------~~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e-------~----~~~Pd 403 (550)
T PF00862_consen 347 LEK------------VSGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAE-------L----QGKPD 403 (550)
T ss_dssp EEE------------ETTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHH-------H----TS--S
T ss_pred ccc------------cCCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHH-------h----CCCCc
Confidence 433 44567899999999985 379999999999999999887766531 1 25799
Q ss_pred EEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHH
Q 001541 309 AIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQE 388 (1057)
Q Consensus 309 vIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~ 388 (1057)
+||+||++.+.+|.++++++|+|+++|.|+++..|+. .+.+.++.++..|+|++++.+|..++++||.|||+|.||
T Consensus 404 lI~GnYsDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~----~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QE 479 (550)
T PF00862_consen 404 LIIGNYSDGNLVASLLSRKLGVTQCFIAHSLEKTKYE----DSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQE 479 (550)
T ss_dssp EEEEEHHHHHHHHHHHHHHHT-EEEEE-SS-HHHHHH----TTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHH
T ss_pred EEEeccCcchHHHHHHHhhcCCceehhhhcccccccc----ccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHh
Confidence 9999999999999999999999999999999988865 577899999999999999999999999999999999999
Q ss_pred HHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCC
Q 001541 389 IEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQD 441 (1057)
Q Consensus 389 ~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~ 441 (1057)
+..++..++.|+.-....|+. ..|.|++.++++||+.++|||+|.+.|-|..
T Consensus 480 I~g~~~~~gqyes~~~ftlpg-Lyrvv~Gi~vFdPkfNiv~PGad~~iyFpyt 531 (550)
T PF00862_consen 480 IAGQKDTVGQYESHKAFTLPG-LYRVVNGIDVFDPKFNIVSPGADESIYFPYT 531 (550)
T ss_dssp HHB-SSSBHTTGGGSSEEETT-TEEEEES--TT-TTEEE------TTTS--TT
T ss_pred hcCCccccCCccchhhcchHh-HHhhhccccccCCcccccCCCCCcceecCCc
Confidence 998877666654321111111 5788999999999999999999999988764
No 64
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.97 E-value=9.3e-30 Score=278.81 Aligned_cols=242 Identities=17% Similarity=0.251 Sum_probs=184.2
Q ss_pred ceEEEEEecCCCCC------cchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEE
Q 001541 774 KHIFVISVDCDSTT------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDL 847 (1057)
Q Consensus 774 kkLi~~DiDGTL~~------~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I 847 (1057)
+.+|++||||||.. .+++.+++++++++++ |+.||+||||++.++..+++++++. .|+++||+||+.|
T Consensus 1 ~~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~----gi~fv~aTGR~~~~~~~~~~~~~~~--~p~~~I~~NGa~I 74 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDGDNQALLRLNALLEDHRGE----DSLLVYSTGRSPHSYKELQKQKPLL--TPDIWVTSVGSEI 74 (249)
T ss_pred CeEEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhcc----CceEEEEcCCCHHHHHHHHhcCCCC--CCCEEEEcCCceE
Confidence 35899999999952 4778999999998886 8999999999999999999999884 5788999999999
Q ss_pred EeccCCCCCCCccccccchhhcccccchhhHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCCCCccHH
Q 001541 848 YYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVK 927 (1057)
Q Consensus 848 ~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 927 (1057)
++.+ ....+..|..++...|..+.+......+.... .+.......+|++|..........+.
T Consensus 75 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------------~~~~~~~~~~k~~~~~~~~~~~~~~~ 136 (249)
T TIGR01485 75 YYGG------AEVPDQHWAEYLSEKWQRDIVVAITDKFEELK------------PQPDLEQRPHKVSFFLDPEAAPEVIK 136 (249)
T ss_pred EeCC------CCcCCHHHHHHHhcccCHHHHHHHHhcCcccc------------cCCccccCCeeEEEEechhhhhHHHH
Confidence 9854 23456788888888888654433332222111 11112345678888753222122245
Q ss_pred HHHHHHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccC-cceEEEeCCC
Q 001541 928 ELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGG-VHKTVILKGI 1006 (1057)
Q Consensus 928 el~~~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~-ag~gVAMgNa 1006 (1057)
++.+.+...+..+.++.+.+. ++||+|+++|||.||++|++++|++++++++ +||+.| | ++||+. ++.+|||+||
T Consensus 137 ~l~~~l~~~~~~~~~~~~~~~-~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~-~GD~~N-D-~~ml~~~~~~~va~~na 212 (249)
T TIGR01485 137 QLTEMLKETGLDVKLIYSSGK-DLDILPQGSGKGQALQYLLQKLAMEPSQTLV-CGDSGN-D-IELFEIGSVRGVIVSNA 212 (249)
T ss_pred HHHHHHHhcCCCEEEEEECCc-eEEEEeCCCChHHHHHHHHHHcCCCccCEEE-EECChh-H-HHHHHccCCcEEEECCC
Confidence 667777666677888888875 9999999999999999999999999999999 888888 8 999998 6799999999
Q ss_pred chhhhhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHHhCcc
Q 001541 1007 CSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLL 1055 (1057)
Q Consensus 1007 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~~g~i 1055 (1057)
..+. +.++.. .+. ...|+|+.+.++||+++|+|||++
T Consensus 213 ~~~~--k~~~~~---------~~~-~~~~~~~~~~~~Gi~e~l~~~~~~ 249 (249)
T TIGR01485 213 QEEL--LQWYDE---------NAK-DKIYHASERCAGGIIEAIAHFDLL 249 (249)
T ss_pred HHHH--HHHHHh---------ccc-CcEEEecCCCcHHHHHHHHHcCCC
Confidence 9333 333321 012 244688999999999999999985
No 65
>PLN02382 probable sucrose-phosphatase
Probab=99.97 E-value=7.2e-30 Score=296.47 Aligned_cols=246 Identities=20% Similarity=0.241 Sum_probs=185.6
Q ss_pred CcceEEEEEecCCCC-C----cchHHHHHHH-HHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCc
Q 001541 772 RRKHIFVISVDCDST-T----GLLDATKKIC-EAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGS 845 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL~-~----~i~~~t~~al-~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa 845 (1057)
.++.||++||||||. + .++.....++ +++.++ |+.|++||||++..+.++++++++. .||++||+||+
T Consensus 7 ~~~~lI~sDLDGTLL~~~~~~~~s~~~~~~l~~~~~~~----gi~fv~aTGR~~~~~~~l~~~~~l~--~p~~~I~~nGt 80 (413)
T PLN02382 7 SPRLMIVSDLDHTMVDHHDPENLSLLRFNALWEAEYRH----DSLLVFSTGRSPTLYKELRKEKPLL--TPDITIMSVGT 80 (413)
T ss_pred CCCEEEEEcCCCcCcCCCCccchhHHHHHHHHHHhhcC----CeeEEEEcCCCHHHHHHHHHhCCCC--CCCEEEEcCCc
Confidence 457899999999994 2 4554455555 777765 8999999999999999999999884 58899999999
Q ss_pred EEEeccCCCCCCCccccccchhhcccccchhhHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCCCCcc
Q 001541 846 DLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPP 925 (1057)
Q Consensus 846 ~I~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 925 (1057)
+|++.+ ....+..|..++...|....+...+..++... .+....+..+|++|+..+......
T Consensus 81 ~I~~~~------~~~~d~~w~~~l~~~w~~~~v~~~~~~~~~l~------------~q~~~~~~~~Ki~~~~~~~~~~~~ 142 (413)
T PLN02382 81 EIAYGE------SMVPDHGWVEYLNKKWDREIVVEETSKFPELK------------LQPETEQRPHKVSFYVDKKKAQEV 142 (413)
T ss_pred EEEeCC------CCccChhHHHHHhccCChhhHHHHHhcCCCcc------------cCCcccCCCeEEEEEechHHhHHH
Confidence 999864 34467889999999998654544433332211 222334567899888643222222
Q ss_pred HHHHHHHHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHh---CCCcccEEEEecCCCCCCccccccCcc-eEE
Q 001541 926 VKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRW---GVELSKMVVFVGESGDTDYEGLLGGVH-KTV 1001 (1057)
Q Consensus 926 ~~el~~~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~l---gI~~e~viaf~GD~~n~D~~eML~~ag-~gV 1001 (1057)
..++.+.+...+..+.++++.+. ++||+|+++|||+||++|+++| |+++++++| |||++| | ++||+.+| +||
T Consensus 143 ~~~l~~~~~~~g~~~~i~~s~~~-~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~ia-fGDs~N-D-leMl~~ag~~gv 218 (413)
T PLN02382 143 IKELSERLEKRGLDVKIIYSGGI-DLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLV-CGDSGN-D-AELFSVPDVYGV 218 (413)
T ss_pred HHHHHHHHHhcCCcEEEEEECCc-EEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEE-EeCCHH-H-HHHHhcCCCCEE
Confidence 34555556555677888888886 9999999999999999999999 999999999 888888 8 99999999 899
Q ss_pred EeCCCchhhhhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHHhCcc
Q 001541 1002 ILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLL 1055 (1057)
Q Consensus 1002 AMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~~g~i 1055 (1057)
||+||. .+.+..+++. ..+.+++. .+.++.++||++||+||+++
T Consensus 219 am~NA~--~elk~~a~~~-------~~~~~~~~-~a~~~~~~GI~~al~~f~l~ 262 (413)
T PLN02382 219 MVSNAQ--EELLQWYAEN-------AKDNPKII-HATERCAAGIIQAIGHFNLG 262 (413)
T ss_pred EEcCCc--HHHHHHHHhh-------ccCCCcEE-EcCCCCccHHHHHHHHhCCC
Confidence 999999 4334333331 11223433 56788999999999999986
No 66
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.97 E-value=3.6e-28 Score=274.44 Aligned_cols=267 Identities=24% Similarity=0.276 Sum_probs=209.8
Q ss_pred CcceEEEEcCC-CchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEe
Q 001541 305 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 383 (1057)
Q Consensus 305 ~~pDvIh~h~~-~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~ 383 (1057)
.+||+||+|.. .....+.+.... ++|+|++.|+.......... ... ..+...+..+|.+++
T Consensus 80 ~~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~-----------~~~------~~~~~~~~~~d~ii~ 141 (353)
T cd03811 80 EKPDVVISHLTTTPNVLALLAARL-GTKLIVWEHNSLSLELKRKL-----------RLL------LLIRKLYRRADKIVA 141 (353)
T ss_pred cCCCEEEEcCccchhHHHHHHhhc-CCceEEEEcCcchhhhccch-----------hHH------HHHHhhccccceEEE
Confidence 46999999987 444444444433 89999999998664422110 000 235567999999999
Q ss_pred cCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchH
Q 001541 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 463 (1057)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1057)
.|+...+.+...+.. +..++.+||||+|...+.+.....
T Consensus 142 ~s~~~~~~~~~~~~~----------------------~~~~~~vi~~~~~~~~~~~~~~~~------------------- 180 (353)
T cd03811 142 VSEGVKEDLLKLLGI----------------------PPDKIEVIYNPIDIEEIRALAEEP------------------- 180 (353)
T ss_pred eccchhhhHHHhhcC----------------------CccccEEecCCcChhhcCcccchh-------------------
Confidence 999887776655432 123899999999988776432110
Q ss_pred HHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCC
Q 001541 464 SEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDL 542 (1057)
Q Consensus 464 ~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l 542 (1057)
. ......++++|+++||+.+.||++.+++|+..+... .+++.+ ++|+++. ...+.+++.++++
T Consensus 181 --~-~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~--~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~ 244 (353)
T cd03811 181 --L-ELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKE--GPDARLVILGDGPL-----------REELEALAKELGL 244 (353)
T ss_pred --h-hcCCCCCceEEEEEecchhhcChHHHHHHHHHhhhc--CCCceEEEEcCCcc-----------HHHHHHHHHhcCC
Confidence 0 122245678999999999999999999999999754 345554 7787764 3456678889999
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHH
Q 001541 543 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQS 622 (1057)
Q Consensus 543 ~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~ 622 (1057)
.++|.|.|. .+++..+|+.| |++|+||..|+||++++|||++|+|||+++.||..|++.++.+|+++++.|.++
T Consensus 245 ~~~v~~~g~--~~~~~~~~~~~----d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~ 318 (353)
T cd03811 245 ADRVHFLGF--QSNPYPYLKAA----DLFVLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAA 318 (353)
T ss_pred CccEEEecc--cCCHHHHHHhC----CEEEeCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHH
Confidence 999999999 46899999999 999999999999999999999999999999999999999999999999999999
Q ss_pred H---HHHHHHHHhCHHHHHHHHHHHHHHh-hcCC
Q 001541 623 V---ADALLKLVADKQLWARCRQNGLKNI-HLFS 652 (1057)
Q Consensus 623 l---a~aI~~ll~d~~~~~~~~~~~~~~v-~~fs 652 (1057)
+ .++|..++.+++.+++++.++++.+ ++|+
T Consensus 319 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 319 LAAAALALLDLLLDPELRERLAAAARERVAREYS 352 (353)
T ss_pred HHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc
Confidence 9 7788888889999999999888777 5775
No 67
>PLN02275 transferase, transferring glycosyl groups
Probab=99.97 E-value=4.6e-28 Score=281.09 Aligned_cols=335 Identities=15% Similarity=0.117 Sum_probs=223.3
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCccccc
Q 001541 189 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYI 268 (1057)
Q Consensus 189 d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l 268 (1057)
|. |.+..+..++..|++.|+ ++|++++..... ... +....+|++|+++|. +... .
T Consensus 14 ~~-g~~~r~~~~~~~l~~~~~-~~v~vi~~~~~~--------~~~-------------~~~~~~~v~v~r~~~-~~~~-~ 68 (371)
T PLN02275 14 DF-GRSPRMQYHALSLARQAS-FQVDVVAYGGSE--------PIP-------------ALLNHPSIHIHLMVQ-PRLL-Q 68 (371)
T ss_pred CC-CCCHHHHHHHHHHHhcCC-ceEEEEEecCCC--------CCH-------------HHhcCCcEEEEECCC-cccc-c
Confidence 44 455567778899998874 589999764210 011 112235899999986 3311 1
Q ss_pred ccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCc---hHHHHHHHhcCCCCEEEEecCCchhhHH
Q 001541 269 AKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADA---GDSAALLSGALNVPMLFTGHSLGRDKLE 345 (1057)
Q Consensus 269 ~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~---~~~a~~l~~~~~iP~V~t~H~l~~~~~~ 345 (1057)
....++..+ .+.......+..+.+.+.. +..+||+||+|.+.. ...+.++++..++|+|+|.|+++..
T Consensus 69 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--- 139 (371)
T PLN02275 69 RLPRVLYAL-ALLLKVAIQFLMLLWFLCV-----KIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT--- 139 (371)
T ss_pred ccccchHHH-HHHHHHHHHHHHHHHHHHh-----hCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH---
Confidence 111111100 0111111111111111110 125799999987432 3456667777899999999998521
Q ss_pred HHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcE
Q 001541 346 QLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRM 425 (1057)
Q Consensus 346 ~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv 425 (1057)
....|.... ...+++.+++ |++.++.||.||++|+...+.+...+ |. ++
T Consensus 140 -~~~~~~~~~---~~~~~~~~~~--e~~~~~~ad~ii~~S~~~~~~l~~~~----------------------g~---~i 188 (371)
T PLN02275 140 -LLALSLGRS---HPLVRLYRWY--ERHYGKMADGHLCVTKAMQHELDQNW----------------------GI---RA 188 (371)
T ss_pred -HHhcccCCC---CHHHHHHHHH--HHHHHhhCCEEEECCHHHHHHHHHhc----------------------CC---Ce
Confidence 111121111 1123344443 77889999999999998777653321 11 37
Q ss_pred EEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc--
Q 001541 426 AIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPL-- 503 (1057)
Q Consensus 426 ~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~-- 503 (1057)
.+||||+ .+.|.|..... ....+...+|+++||+.+.||++.+++|+..+...
T Consensus 189 ~vi~n~~-~~~f~~~~~~~------------------------~~~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~ 243 (371)
T PLN02275 189 TVLYDQP-PEFFRPASLEI------------------------RLRPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVA 243 (371)
T ss_pred EEECCCC-HHHcCcCCchh------------------------cccCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhh
Confidence 8999985 46665432110 00123345788999999999999999999887321
Q ss_pred -------------cCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEe-CCCCCCCcHHHHHHHhhcCC
Q 001541 504 -------------RELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY-PKHHKQSDVPEIYRLAAKTK 568 (1057)
Q Consensus 504 -------------~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f-~g~v~~~dl~~ly~~Aa~~~ 568 (1057)
...+++.+ |+|+|+. .++++++++++++.+ |.| .|+++.++++.+|+.|
T Consensus 244 ~~~~~~~~~~~~~~~~~~i~l~ivG~G~~-----------~~~l~~~~~~~~l~~-v~~~~~~~~~~~~~~~l~~a---- 307 (371)
T PLN02275 244 ARLNESDSASGKQSLYPRLLFIITGKGPQ-----------KAMYEEKISRLNLRH-VAFRTMWLEAEDYPLLLGSA---- 307 (371)
T ss_pred hccccccccccccccCCCeEEEEEeCCCC-----------HHHHHHHHHHcCCCc-eEEEcCCCCHHHHHHHHHhC----
Confidence 12356765 8899986 467888999999976 666 5578999999999999
Q ss_pred cEEEEcC---CCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHH
Q 001541 569 GVFINPA---FIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLV 631 (1057)
Q Consensus 569 dv~v~ps---~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll 631 (1057)
|++|+|+ ..|+||++++||||||+|||+++.||..|++.++.+|++++ |+++++++|.++|
T Consensus 308 Dv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 308 DLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred CEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 9999863 34899999999999999999999999999999999999996 7999999998875
No 68
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.97 E-value=2.2e-28 Score=291.73 Aligned_cols=281 Identities=18% Similarity=0.194 Sum_probs=211.9
Q ss_pred CcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEec
Q 001541 305 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 384 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~ 384 (1057)
.++||+|++.+.....+ .+.....+|.++++|+-....... .+ .....+..|... ....+.+|.||++
T Consensus 210 ~~~di~i~dr~~~~~~~-~~~~~~~~~~v~~lH~~h~~~~~~---~~--~~~~~~~~y~~~------~~~~~~~D~iI~~ 277 (500)
T TIGR02918 210 TKKDIIILDRSTGIGQA-VLENKGPAKLGVVVHAEHFSESAT---NE--TYILWNNYYEYQ------FSNADYIDFFITA 277 (500)
T ss_pred CCCCEEEEcCCcccchH-HHhcCCCceEEEEEChhhhcCccC---cc--hhHHHHHHHHHH------HhchhhCCEEEEC
Confidence 46899999876432222 344556899999999753221100 00 000011122211 1246788999999
Q ss_pred CHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHH
Q 001541 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 464 (1057)
Q Consensus 385 S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1057)
|+...+.+...+.. ++...+++.+||+|++...+.+..
T Consensus 278 S~~~~~~l~~~~~~-------------------~~~~~~ki~viP~g~~~~~~~~~~----------------------- 315 (500)
T TIGR02918 278 TDIQNQILKNQFKK-------------------YYNIEPRIYTIPVGSLDELQYPEQ----------------------- 315 (500)
T ss_pred CHHHHHHHHHHhhh-------------------hcCCCCcEEEEcCCCcccccCccc-----------------------
Confidence 98876665443221 122234899999998654433210
Q ss_pred HHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCC
Q 001541 465 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 543 (1057)
Q Consensus 465 ~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~ 543 (1057)
......|+++||+.+.||++.+|+|+..+.+ ..|++.| |+|+|+. ...+.+++.++++.
T Consensus 316 -------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~--~~p~~~l~i~G~G~~-----------~~~l~~~i~~~~l~ 375 (500)
T TIGR02918 316 -------ERKPFSIITASRLAKEKHIDWLVKAVVKAKK--SVPELTFDIYGEGGE-----------KQKLQKIINENQAQ 375 (500)
T ss_pred -------ccCCeEEEEEeccccccCHHHHHHHHHHHHh--hCCCeEEEEEECchh-----------HHHHHHHHHHcCCC
Confidence 1234579999999999999999999999874 3456665 7898864 46688899999999
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCC-CchhhhhcCCceEEeCCC----
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG-GPVDIHRVLDNGLLVDPH---- 618 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~G-g~~eiv~~~~~Gllv~p~---- 618 (1057)
++|.|.|+. ++.++|+.| |++|+||..||||++++||||||+|||+++.+ |++|+|.++.+|+++++.
T Consensus 376 ~~V~f~G~~---~~~~~~~~a----dv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~ 448 (500)
T TIGR02918 376 DYIHLKGHR---NLSEVYKDY----ELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEED 448 (500)
T ss_pred CeEEEcCCC---CHHHHHHhC----CEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCcccc
Confidence 999999963 799999999 99999999999999999999999999999986 899999999999999743
Q ss_pred C----HHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcc
Q 001541 619 D----QQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGC 667 (1057)
Q Consensus 619 d----~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~ 667 (1057)
| +++||++|.++++ ++.++++++++++.++.|||+.++++|.++++++
T Consensus 449 d~~~~~~~la~~I~~ll~-~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 449 DEDQIITALAEKIVEYFN-SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVREV 500 (500)
T ss_pred chhHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 3 8899999999995 5679999999999889999999999999999764
No 69
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.97 E-value=2.8e-28 Score=280.48 Aligned_cols=265 Identities=17% Similarity=0.210 Sum_probs=197.2
Q ss_pred CcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHH---HHH-HhhhcchHHHHHHHHHHHHHHHHHHHhhcCCE
Q 001541 305 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLE---QLL-KQARLSRDEINATYKIMRRIEAEELSLDASEI 380 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~---~l~-~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~ 380 (1057)
.+||+||++..... ..+....++|.+++.|+..+..+. ... ..+..........++..++ .|..+++.+|.
T Consensus 82 ~~~D~v~~~~~~~~---~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~ 156 (351)
T cd03804 82 SGYDLVISSSHAVA---KGVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRI--WDRRSAARVDY 156 (351)
T ss_pred cCCCEEEEcCcHHh---ccccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHH--HHHHHhcCCCE
Confidence 46999999764221 112245689999999975322111 111 1111111111112233333 36678999999
Q ss_pred EEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCC
Q 001541 381 VITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDP 460 (1057)
Q Consensus 381 Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~ 460 (1057)
|+++|+...+.+.+.+.. +..+||||+|.+.|.+..
T Consensus 157 ii~~S~~~~~~~~~~~~~-------------------------~~~vi~~~~d~~~~~~~~------------------- 192 (351)
T cd03804 157 FIANSRFVARRIKKYYGR-------------------------DATVIYPPVDTDRFTPAE------------------- 192 (351)
T ss_pred EEECCHHHHHHHHHHhCC-------------------------CcEEECCCCCHhhcCcCC-------------------
Confidence 999999988776554332 567999999998776421
Q ss_pred chHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHc
Q 001541 461 PIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY 540 (1057)
Q Consensus 461 ~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~ 540 (1057)
...+.++++||+.+.||++.+++|+..+. ..+ +|+|++++. ..+.+
T Consensus 193 ------------~~~~~il~~G~~~~~K~~~~li~a~~~~~-----~~l-~ivG~g~~~-----------~~l~~----- 238 (351)
T cd03804 193 ------------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG-----KRL-VVIGDGPEL-----------DRLRA----- 238 (351)
T ss_pred ------------CCCCEEEEEEcCccccChHHHHHHHHHCC-----CcE-EEEECChhH-----------HHHHh-----
Confidence 23567999999999999999999999873 233 578887641 22222
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCH
Q 001541 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ 620 (1057)
Q Consensus 541 ~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~ 620 (1057)
+..++|.|+|+++.+++..+|+.| |++|+||. |+||++++||||||+|||+++.||..|++.++.+|++++|.|+
T Consensus 239 ~~~~~V~~~g~~~~~~~~~~~~~a----d~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~ 313 (351)
T cd03804 239 KAGPNVTFLGRVSDEELRDLYARA----RAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTV 313 (351)
T ss_pred hcCCCEEEecCCCHHHHHHHHHhC----CEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCH
Confidence 445789999999999999999999 99999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHH
Q 001541 621 QSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTY 660 (1057)
Q Consensus 621 ~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~ 660 (1057)
++++++|..++++++ .++++.++.+++|+|+.+.+++
T Consensus 314 ~~la~~i~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 350 (351)
T cd03804 314 ESLAAAVERFEKNED---FDPQAIRAHAERFSESRFREKI 350 (351)
T ss_pred HHHHHHHHHHHhCcc---cCHHHHHHHHHhcCHHHHHHHh
Confidence 999999999999884 2344555566789999988765
No 70
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.97 E-value=1.8e-28 Score=287.99 Aligned_cols=276 Identities=16% Similarity=0.223 Sum_probs=218.3
Q ss_pred CcceEEEEcCCC-chHHHHHHHhcCCCC-EEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEE
Q 001541 305 VWPVAIHGHYAD-AGDSAALLSGALNVP-MLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVI 382 (1057)
Q Consensus 305 ~~pDvIh~h~~~-~~~~a~~l~~~~~iP-~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi 382 (1057)
..+|++|+++.. .+..+..+.+..+.+ +|.+.|+..... .. ....+... .+.+++.+|.|+
T Consensus 126 ~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~--~~----------~~~~~~~~-----~~~~~~~~d~ii 188 (407)
T cd04946 126 GQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYE--DR----------YPSGYIPL-----RRYLLSSLDAVF 188 (407)
T ss_pred cCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhh--hh----------ccccchHH-----HHHHHhcCCEEE
Confidence 457899997653 344445566666665 999999764211 00 00111111 234688999999
Q ss_pred ecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCch
Q 001541 383 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPI 462 (1057)
Q Consensus 383 ~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~ 462 (1057)
++|+...+.+...|+. ...++.++|+|++...+.+..
T Consensus 189 ~~S~~~~~~l~~~~~~----------------------~~~ki~vi~~gv~~~~~~~~~--------------------- 225 (407)
T cd04946 189 PCSEQGRNYLQKRYPA----------------------YKEKIKVSYLGVSDPGIISKP--------------------- 225 (407)
T ss_pred ECCHHHHHHHHHHCCC----------------------ccccEEEEECCcccccccCCC---------------------
Confidence 9999988876555433 223889999999987664321
Q ss_pred HHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcC
Q 001541 463 WSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYD 541 (1057)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~ 541 (1057)
...+.+.|+++||+.+.||++.+++|+..+.+..+..++.+ ++|+++. ...+.+++...+
T Consensus 226 --------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~-----------~~~l~~~~~~~~ 286 (407)
T cd04946 226 --------SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL-----------EDTLKELAESKP 286 (407)
T ss_pred --------CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH-----------HHHHHHHHHhcC
Confidence 02456789999999999999999999999976555456664 7788764 456777777788
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCC-CH
Q 001541 542 LYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPH-DQ 620 (1057)
Q Consensus 542 l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~-d~ 620 (1057)
..++|.|+|+++.+++..+|+.+ ..|+|++||..||||++++||||||+|||+|+.||..|++.++.+|+++++. |+
T Consensus 287 ~~~~V~f~G~v~~~e~~~~~~~~--~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~ 364 (407)
T cd04946 287 ENISVNFTGELSNSEVYKLYKEN--PVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTP 364 (407)
T ss_pred CCceEEEecCCChHHHHHHHhhc--CCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCH
Confidence 88899999999999999999863 1189999999999999999999999999999999999999999899999864 89
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHH
Q 001541 621 QSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYL 661 (1057)
Q Consensus 621 ~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l 661 (1057)
++++++|.+++++++++++++++|++.+ ++|||+...++|.
T Consensus 365 ~~la~~I~~ll~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 365 NELVSSLSKFIDNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 9999999999999999999999999999 6999999998875
No 71
>PRK10976 putative hydrolase; Provisional
Probab=99.96 E-value=1.8e-29 Score=279.45 Aligned_cols=244 Identities=12% Similarity=0.084 Sum_probs=159.7
Q ss_pred ceEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEec
Q 001541 774 KHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 850 (1057)
Q Consensus 774 kkLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~ 850 (1057)
.|||++||||||. +.+++.++++|++++++ |+.|+|||||++.++.++++.++++ +++||+||+.|+..
T Consensus 2 ikli~~DlDGTLl~~~~~is~~~~~ai~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~~~ 73 (266)
T PRK10976 2 YQVVASDLDGTLLSPDHTLSPYAKETLKLLTAR----GIHFVFATGRHHVDVGQIRDNLEIK----SYMITSNGARVHDT 73 (266)
T ss_pred ceEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHC----CCEEEEEcCCChHHHHHHHHhcCCC----CeEEEcCCcEEECC
Confidence 4899999999993 56999999999999987 9999999999999999999999983 47899999999964
Q ss_pred cCCC-CCCCccccc-----cch---------hhcccccchhh-HHHHHHHhhhcccccccccccccccccccccCcceEE
Q 001541 851 TLNS-EDGPFVVDF-----YYH---------SHIEYRWGGEG-LRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYA 914 (1057)
Q Consensus 851 ~~~~-~~~~~~~d~-----~~~---------~~i~~~w~~e~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 914 (1057)
.... ....+..+. .+. ......|.... ................ .............++.
T Consensus 74 ~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~ki~ 148 (266)
T PRK10976 74 DGNLIFSHNLDRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQ-----LYEPGLLEPDGVSKVF 148 (266)
T ss_pred CCCEehhhcCCHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcce-----eechhhcccCCceEEE
Confidence 3211 000000000 000 00000010000 0000000000000000 0000000011234444
Q ss_pred EEecCCCCCccHHHHHHHHHHh-cCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCcccc
Q 001541 915 FSVQKPGMTPPVKELRKVLRIQ-ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGL 993 (1057)
Q Consensus 915 ~~~~~~~~~~~~~el~~~l~~~-~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eM 993 (1057)
+...++ ..+.++.+.+... ...+.++.+.+. ++||+|+++|||.||++|++++||++++++| |||+.| | ++|
T Consensus 149 ~~~~~~---~~~~~~~~~l~~~~~~~~~~~~s~~~-~~eI~~~gvsKg~al~~l~~~lgi~~~~via-fGD~~N-D-i~M 221 (266)
T PRK10976 149 FTCDSH---EKLLPLEQAINARWGDRVNVSFSTLT-CLEVMAGGVSKGHALEAVAKKLGYSLKDCIA-FGDGMN-D-AEM 221 (266)
T ss_pred EEcCCH---HHHHHHHHHHHHHhCCcEEEEEeCCc-eEEEEcCCCChHHHHHHHHHHcCCCHHHeEE-EcCCcc-c-HHH
Confidence 332211 2234455555433 345777777775 9999999999999999999999999999999 888888 8 999
Q ss_pred ccCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHHhCc
Q 001541 994 LGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGL 1054 (1057)
Q Consensus 994 L~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~~g~ 1054 (1057)
|+.+|+||||+||. .+.|..|+. .+||.++++||++++|++|.+
T Consensus 222 l~~ag~~vAm~NA~--~~vK~~A~~---------------~~v~~~n~edGVa~~l~~~~~ 265 (266)
T PRK10976 222 LSMAGKGCIMGNAH--QRLKDLLPE---------------LEVIGSNADDAVPHYLRKLYL 265 (266)
T ss_pred HHHcCCCeeecCCc--HHHHHhCCC---------------CeecccCchHHHHHHHHHHhh
Confidence 99999999999999 444555541 148889999999999999853
No 72
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.96 E-value=6.5e-28 Score=282.73 Aligned_cols=377 Identities=14% Similarity=0.120 Sum_probs=242.9
Q ss_pred ceEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcc
Q 001541 165 KLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDF 244 (1057)
Q Consensus 165 ~m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~ 244 (1057)
+-.|++++.-.+ |. -||-+..-.. =|-.|++.|+ ++|+++.+=....+...-|+.....-.+.+-+.+
T Consensus 322 ~r~~~ivTtAsl----PW------mTGtavnpL~-rAayLa~~~~-~~VtlviPWl~~~dq~~vy~~~~~F~~p~eQe~~ 389 (794)
T PLN02501 322 KRHVAIVTTASL----PW------MTGTAVNPLF-RAAYLAKSAK-QNVTLLVPWLCKSDQELVYPNNLTFSSPEEQESY 389 (794)
T ss_pred CCeEEEEEcccC----cc------cccccccHHH-HHHHhcccCC-ceEEEEEecCCccccccccCCCcccCCHHHHHHH
Confidence 347999997776 22 3555554443 4678899866 9999987643322222223211100000000000
Q ss_pred c-----cccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC-Cch
Q 001541 245 M-----DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA-DAG 318 (1057)
Q Consensus 245 ~-----~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~-~~~ 318 (1057)
. ++++-.++..|..+|... ...+..+.|. . .+.+.|.. ..|||||.+.+ ..|
T Consensus 390 ir~wl~~r~g~~~~~~i~fYpg~~---~~~~~SI~p~-----g-------dI~~~L~~-------f~PDVVHLatP~~LG 447 (794)
T PLN02501 390 IRNWLEERIGFKADFKISFYPGKF---SKERRSIIPA-----G-------DTSQFIPS-------KDADIAILEEPEHLN 447 (794)
T ss_pred HHHHHHHhcCCCCCceEEeecchh---ccCCccccch-----H-------HHHHHhhc-------cCCCEEEECCchhhc
Confidence 0 122223344454444311 1223333332 1 11222222 67999999987 466
Q ss_pred HH--HHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhh-cCCEEEecCHHHHHHHHhh
Q 001541 319 DS--AALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLD-ASEIVITSTRQEIEEQWRL 395 (1057)
Q Consensus 319 ~~--a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~-~ad~Vi~~S~~~~~~~~~~ 395 (1057)
+. |..++++++ |+|.++|.....+.... ..|.+.. ..++..+++ ..+ +||.|+++|.... .+
T Consensus 448 w~~~Glr~ArKl~-PVVasyHTny~eYl~~y-~~g~L~~----~llk~l~~~-----v~r~hcD~VIaPS~atq-~L--- 512 (794)
T PLN02501 448 WYHHGKRWTDKFN-HVVGVVHTNYLEYIKRE-KNGALQA----FFVKHINNW-----VTRAYCHKVLRLSAATQ-DL--- 512 (794)
T ss_pred cHHHHHHHHHHcC-CeEEEEeCCcHHHHhHh-cchhHHH----HHHHHHHHH-----HHHhhCCEEEcCCHHHH-Hh---
Confidence 66 888898999 99999999887655433 2222111 111122221 121 2899999996543 21
Q ss_pred hCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCC
Q 001541 396 YDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRK 475 (1057)
Q Consensus 396 y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (1057)
.. ++....+|||.+.|.|.... ....++......
T Consensus 513 -~~-------------------------~vI~nVnGVDte~F~P~~r~--------------------~~~r~lgi~~~~ 546 (794)
T PLN02501 513 -PK-------------------------SVICNVHGVNPKFLKIGEKV--------------------AEERELGQQAFS 546 (794)
T ss_pred -cc-------------------------cceeecccccccccCCcchh--------------------HHHHhcCCcccc
Confidence 00 11122269999999875321 011222222334
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCC
Q 001541 476 PVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQ 554 (1057)
Q Consensus 476 ~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~ 554 (1057)
+.++|+||+.+.||++.||+|+..+... .+++.| |+|+|++ ...+.+++.++++ .|.|+|. .
T Consensus 547 kgiLfVGRLa~EKGld~LLeAla~L~~~--~pnvrLvIVGDGP~-----------reeLe~la~eLgL--~V~FLG~--~ 609 (794)
T PLN02501 547 KGAYFLGKMVWAKGYRELIDLLAKHKNE--LDGFNLDVFGNGED-----------AHEVQRAAKRLDL--NLNFLKG--R 609 (794)
T ss_pred CceEEEEcccccCCHHHHHHHHHHHHhh--CCCeEEEEEcCCcc-----------HHHHHHHHHHcCC--EEEecCC--C
Confidence 5689999999999999999999988642 346664 8899986 4567778888887 4899998 4
Q ss_pred CcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCH
Q 001541 555 SDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADK 634 (1057)
Q Consensus 555 ~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~ 634 (1057)
+++..+|+.+ ||||+||..|+||++++||||||+|||+++.||. +++.++.+|+++ .|+++++++|.++|.++
T Consensus 610 dd~~~lyasa----DVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~--~D~EafAeAI~~LLsd~ 682 (794)
T PLN02501 610 DHADDSLHGY----KVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTY--KTSEDFVAKVKEALANE 682 (794)
T ss_pred CCHHHHHHhC----CEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEec--CCHHHHHHHHHHHHhCc
Confidence 6778999999 9999999999999999999999999999999985 446677788876 59999999999999987
Q ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 001541 635 QLWARCRQNGLKNIHLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 635 ~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~ 665 (1057)
..+..+. ....|||+..++++++.-+
T Consensus 683 ~~rl~~~-----a~~~~SWeAaadrLle~~~ 708 (794)
T PLN02501 683 PQPLTPE-----QRYNLSWEAATQRFMEYSD 708 (794)
T ss_pred hhhhHHH-----HHhhCCHHHHHHHHHHhhc
Confidence 6443322 1348999999999998654
No 73
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.96 E-value=4e-29 Score=276.33 Aligned_cols=233 Identities=15% Similarity=0.150 Sum_probs=158.7
Q ss_pred cceEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEe
Q 001541 773 RKHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYY 849 (1057)
Q Consensus 773 ~kkLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~ 849 (1057)
..|+|++||||||. +.+++.++++|++++++ |+.|+|||||++..+.++++++++. .++||+||++|++
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~~~~~----g~~v~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~~ 73 (264)
T COG0561 2 MIKLLAFDLDGTLLDSNKTISPETKEALARLREK----GVKVVLATGRPLPDVLSILEELGLD----GPLITFNGALIYN 73 (264)
T ss_pred CeeEEEEcCCCCccCCCCccCHHHHHHHHHHHHC----CCEEEEECCCChHHHHHHHHHcCCC----ccEEEeCCeEEec
Confidence 46899999999993 66999999999999987 9999999999999999999999994 3799999999998
Q ss_pred ccCCCCCCCccccccchhhcccccchhhHHHHHHHhhhc---cccccccccccccc---------------------ccc
Q 001541 850 STLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQ---VTDKKAESGEKVLT---------------------PAE 905 (1057)
Q Consensus 850 ~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~---~~~~~~~~~~~~~~---------------------~~~ 905 (1057)
.+. .. ....+..+.+..++...... ....... ..... ...
T Consensus 74 ~~~------~i--------~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (264)
T COG0561 74 GGE------LL--------FQKPLSREDVEELLELLEDFQGIALVLYTD--DGIYLTKKRGTFAEARIGFANLSPVGREA 137 (264)
T ss_pred CCc------EE--------eeecCCHHHHHHHHHHHHhccCceEEEEec--cceeeccCCCcccccccccccccccccch
Confidence 731 11 11122222233222211110 0000000 00000 000
Q ss_pred cccCcceEEEEecCCCCCccHHHHHHHHHHhcC--cEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEec
Q 001541 906 QLSTNYCYAFSVQKPGMTPPVKELRKVLRIQAL--RCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVG 983 (1057)
Q Consensus 906 ~~~~~~k~~~~~~~~~~~~~~~el~~~l~~~~~--~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~G 983 (1057)
......++...... .....++.+.+..... ...+..+.+. ++||+|+|+|||.||++|+++||++++++|| ||
T Consensus 138 ~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~s~~~-~lei~~~g~~K~~al~~l~~~lgi~~~~v~a-fG 212 (264)
T COG0561 138 AELEDNKIIALDKD---HEILEELVEALRKRFPDLGLTVSSSGPI-SLDITPKGVSKGYALQRLAKLLGIKLEEVIA-FG 212 (264)
T ss_pred hhcCcceEEEEecC---hHhHHHHHHHHhhhccccceEEEEcCCc-eEEEecCCCchHHHHHHHHHHhCCCHHHeEE-eC
Confidence 00000111111111 1234455555554433 3344444443 5999999999999999999999999999999 88
Q ss_pred CCCCCCccccccCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHHhCcc
Q 001541 984 ESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLL 1055 (1057)
Q Consensus 984 D~~n~D~~eML~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~~g~i 1055 (1057)
|+.| | ++||+.+|+|||||||. .+.+..|+ ++|.+++++||+++|+++.++
T Consensus 213 D~~N-D-~~Ml~~ag~gvam~Na~--~~~k~~A~-----------------~vt~~n~~~Gv~~~l~~~~~~ 263 (264)
T COG0561 213 DSTN-D-IEMLEVAGLGVAMGNAD--EELKELAD-----------------YVTTSNDEDGVAEALEKLLLL 263 (264)
T ss_pred Cccc-c-HHHHHhcCeeeeccCCC--HHHHhhCC-----------------cccCCccchHHHHHHHHHhcc
Confidence 8888 8 99999999999999998 33333333 599999999999999999765
No 74
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.96 E-value=2.2e-29 Score=279.66 Aligned_cols=242 Identities=14% Similarity=0.165 Sum_probs=159.4
Q ss_pred ceEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEec
Q 001541 774 KHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 850 (1057)
Q Consensus 774 kkLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~ 850 (1057)
.|||++||||||. +.+++.++++|++++++ |+.|+|||||++.++.+++++++++ +++||+||+.|++.
T Consensus 2 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~I~~~ 73 (272)
T PRK15126 2 ARLAAFDMDGTLLMPDHHLGEKTLSTLARLRER----DITLTFATGRHVLEMQHILGALSLD----AYLITGNGTRVHSL 73 (272)
T ss_pred ccEEEEeCCCcCcCCCCcCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHcCCC----CcEEecCCcEEEcC
Confidence 5799999999993 67999999999999987 9999999999999999999999983 47899999999964
Q ss_pred cCCCC-CCCccccc-------cchhhc------ccccch-hhHHHHHHHhhhcccccccccccccccccccccCcceEEE
Q 001541 851 TLNSE-DGPFVVDF-------YYHSHI------EYRWGG-EGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAF 915 (1057)
Q Consensus 851 ~~~~~-~~~~~~d~-------~~~~~i------~~~w~~-e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 915 (1057)
..... ...+..+. .+...+ ...|.. .................. ..-.........+|+.+
T Consensus 74 ~~~~l~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ki~~ 148 (272)
T PRK15126 74 EGELLHRQDLPADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQ-----LIDLKRLPAHGVTKICF 148 (272)
T ss_pred CCCEEEeecCCHHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceE-----EecHHHccccCceEEEE
Confidence 32110 00000000 000000 000100 000000000000000000 00000001122455544
Q ss_pred EecCCCCCccHHHHHHHHHHh-cCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccc
Q 001541 916 SVQKPGMTPPVKELRKVLRIQ-ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLL 994 (1057)
Q Consensus 916 ~~~~~~~~~~~~el~~~l~~~-~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML 994 (1057)
.. ++ ..++++.+.+... ...+.++.+.+. ++||+|+++|||.||++|++++||++++++| |||+.| | ++||
T Consensus 149 ~~-~~---~~~~~~~~~l~~~~~~~~~~~~s~~~-~~eI~~~g~sKg~al~~l~~~~gi~~~~v~a-fGD~~N-D-i~Ml 220 (272)
T PRK15126 149 CG-DH---DDLTRLQIQLNEALGERAHLCFSATD-CLEVLPVGCNKGAALAVLSQHLGLSLADCMA-FGDAMN-D-REML 220 (272)
T ss_pred EC-CH---HHHHHHHHHHHHHhcCCEEEEEcCCc-EEEeecCCCChHHHHHHHHHHhCCCHHHeEE-ecCCHH-H-HHHH
Confidence 32 22 2345566656543 345777777765 8999999999999999999999999999999 888888 8 9999
Q ss_pred cCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHHhC
Q 001541 995 GGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 1053 (1057)
Q Consensus 995 ~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~~g 1053 (1057)
+.+|+|||||||. .+.|..|+. ..||.++++|||+++|+++-
T Consensus 221 ~~ag~~vAm~Na~--~~vK~~A~~---------------~~v~~~n~edGva~~l~~~~ 262 (272)
T PRK15126 221 GSVGRGFIMGNAM--PQLRAELPH---------------LPVIGHCRNQAVSHYLTHWL 262 (272)
T ss_pred HHcCCceeccCCh--HHHHHhCCC---------------CeecCCCcchHHHHHHHHHh
Confidence 9999999999999 444444432 13677999999999999863
No 75
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.96 E-value=1.6e-28 Score=289.38 Aligned_cols=366 Identities=15% Similarity=0.136 Sum_probs=247.1
Q ss_pred CeEEEEccCCCc--c---cccccccCCCChhH------HHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHH
Q 001541 253 GAYIIRIPFGPK--D---KYIAKELLWPHIPE------FVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSA 321 (1057)
Q Consensus 253 gv~i~rip~~p~--~---~~l~k~~l~~~l~~------f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a 321 (1057)
++.++.++..+. + ....+..+||.+.. |-...+....+.-+.+++.+...- ..-|+|.+|......++
T Consensus 64 ~~~~~~v~l~~~~~~~~y~gf~n~~lWPl~H~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~-~~~d~vwvhDYhl~l~p 142 (456)
T TIGR02400 64 KITLAPVFLSEEDVDGYYNGFSNSTLWPLFHYRPDLIRYDRKAWEAYRRVNRLFAEALAPLL-QPGDIVWVHDYHLMLLP 142 (456)
T ss_pred CceEEEEECCHHHHHHHHHHhhhhhcchhhcccccccccCHHHHHHHHHHHHHHHHHHHHhC-CCCCEEEEecchhhHHH
Confidence 445555555332 1 12356778876533 222333333333334444333221 12489999998777787
Q ss_pred HHHHhcC-CCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCC
Q 001541 322 ALLSGAL-NVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFD 400 (1057)
Q Consensus 322 ~~l~~~~-~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~ 400 (1057)
.++.+.. ..++.+..|-.++..- ++. ...+.+. -...+-.||.|-..|...++.+....
T Consensus 143 ~~lr~~~~~~~igfFlHipfP~~e--~f~-----------~lp~r~~---il~gll~~dligF~t~~~~~~Fl~~~---- 202 (456)
T TIGR02400 143 AMLRELGVQNKIGFFLHIPFPSSE--IYR-----------TLPWRRE---LLEGLLAYDLVGFQTYDDARNFLSAV---- 202 (456)
T ss_pred HHHHhhCCCCeEEEEEeCCCCChH--HHh-----------hCCcHHH---HHHHHhcCCEEEECCHHHHHHHHHHH----
Confidence 7777654 5688899997765331 000 0001111 12367899999999998888765532
Q ss_pred hHHHHHHHHh-HhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEE
Q 001541 401 PVLERKLRAR-IKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVIL 479 (1057)
Q Consensus 401 ~~~~~~l~~~-~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il 479 (1057)
.+.|... ...++...|+.. ++.+||||||++.|.+..... ........++..+ +++++|+
T Consensus 203 ---~~~l~~~~~~~~~~~~g~~~-~v~viP~GID~~~f~~~~~~~-------------~~~~~~~~lr~~~--~~~~vIl 263 (456)
T TIGR02400 203 ---SRELGLETLPNGVESGGRTV-RVGAFPIGIDVDRFAEQAKKP-------------SVQKRIAELRESL--KGRKLII 263 (456)
T ss_pred ---HHHhCCcccCCceEECCcEE-EEEEecCcCCHHHHHHHhcCh-------------hHHHHHHHHHHHc--CCCeEEE
Confidence 1222111 123444444444 899999999999997542110 1111122233333 4788999
Q ss_pred EEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EEe-----cCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001541 480 ALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMG-----NRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 551 (1057)
Q Consensus 480 ~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~--~l~L-IvG-----~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~ 551 (1057)
++||+++.||++.+++||+.+.+..+.. +++| ++| +++++++++....+..++++......++.+.+.+.+.
T Consensus 264 ~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~ 343 (456)
T TIGR02400 264 GVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRS 343 (456)
T ss_pred EccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCC
Confidence 9999999999999999999987655433 3444 343 3333334444333444444444445566677778889
Q ss_pred CCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCc----EEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHH
Q 001541 552 HKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLP----IVATKNGGPVDIHRVLDNGLLVDPHDQQSVADAL 627 (1057)
Q Consensus 552 v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~P----VVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI 627 (1057)
++.+++.++|++| ||||+||..||||++++||||||+| +|+|+.+|..+.+. +|++|+|+|++++|+||
T Consensus 344 ~~~~el~aly~aa----Dv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~gllVnP~d~~~lA~aI 416 (456)
T TIGR02400 344 YDREELMALYRAA----DVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GALLVNPYDIDGMADAI 416 (456)
T ss_pred CCHHHHHHHHHhC----cEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHHhC---CcEEECCCCHHHHHHHH
Confidence 9999999999999 9999999999999999999999999 89998887777663 79999999999999999
Q ss_pred HHHHh-CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 001541 628 LKLVA-DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 628 ~~ll~-d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~ 665 (1057)
.++|+ ++++++++.+..++++.+||+..|+++|++.+.
T Consensus 417 ~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 417 ARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred HHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 99999 567788888888999988999999999998764
No 76
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.96 E-value=6.7e-29 Score=275.45 Aligned_cols=243 Identities=11% Similarity=0.091 Sum_probs=157.3
Q ss_pred ceEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEec
Q 001541 774 KHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 850 (1057)
Q Consensus 774 kkLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~ 850 (1057)
.|||++||||||. +.+++.++++|++++++ |+.|+|||||++.++.++++++++.. ..+++||+||+.|++.
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~~-~~~~~I~~NGa~i~~~ 77 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDHTISPAVKQAIAAARAK----GVNVVLTTGRPYAGVHRYLKELHMEQ-PGDYCITNNGALVQKA 77 (270)
T ss_pred eEEEEEecCCcCcCCCCccCHHHHHHHHHHHHC----CCEEEEecCCChHHHHHHHHHhCCCC-CCCeEEEcCCeEEEEC
Confidence 5899999999993 67999999999999987 99999999999999999999999842 1257999999999964
Q ss_pred cCCC--CCCCccccc-----cch------hhc--ccccch--hhHHHHH--HHhhhcccccccccccccccccccccCcc
Q 001541 851 TLNS--EDGPFVVDF-----YYH------SHI--EYRWGG--EGLRKTL--VRWASQVTDKKAESGEKVLTPAEQLSTNY 911 (1057)
Q Consensus 851 ~~~~--~~~~~~~d~-----~~~------~~i--~~~w~~--e~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (1057)
.... ....+..+. .+. ..+ ...+.. ....... ..... ..... . ..+.+........
T Consensus 78 ~~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~--~~~~~~~~~~~~~ 152 (270)
T PRK10513 78 ADGETVAQTALSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLT-GIPLV--F--REVEKMDPNLQFP 152 (270)
T ss_pred CCCCEEEecCCCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhc-cCCcc--c--cchhhccccCCce
Confidence 2111 000000000 000 000 000000 0000000 00000 00000 0 0000000011123
Q ss_pred eEEEEecCCCCCccHHHHHHHHHH-hcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCc
Q 001541 912 CYAFSVQKPGMTPPVKELRKVLRI-QALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDY 990 (1057)
Q Consensus 912 k~~~~~~~~~~~~~~~el~~~l~~-~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~ 990 (1057)
|+... ..+ ..+.++.+.+.. ....+.++.+.+. ++||+|+++|||+||++|++++||++++++| |||+.| |
T Consensus 153 k~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~s~~~-~~eI~~~gvsKg~al~~l~~~~gi~~~~v~a-fGD~~N-D- 224 (270)
T PRK10513 153 KVMMI-DEP---EILDAAIARIPAEVKERYTVLKSAPY-FLEILDKRVNKGTGVKSLAEHLGIKPEEVMA-IGDQEN-D- 224 (270)
T ss_pred EEEEe-CCH---HHHHHHHHHhHHHhcCcEEEEEecCe-eEEEeCCCCChHHHHHHHHHHhCCCHHHEEE-ECCchh-h-
Confidence 33332 111 123344444432 2345777777775 8999999999999999999999999999999 888888 8
Q ss_pred cccccCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHHhC
Q 001541 991 EGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 1053 (1057)
Q Consensus 991 ~eML~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~~g 1053 (1057)
++||+.+|+||||+||. .+.|..|+ +||.++++|||+++|+++.
T Consensus 225 i~Ml~~ag~~vAm~NA~--~~vK~~A~-----------------~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 225 IAMIEYAGVGVAMGNAI--PSVKEVAQ-----------------FVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred HHHHHhCCceEEecCcc--HHHHHhcC-----------------eeccCCCcchHHHHHHHHh
Confidence 99999999999999999 43344444 5999999999999999975
No 77
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.96 E-value=1.4e-28 Score=267.30 Aligned_cols=233 Identities=21% Similarity=0.387 Sum_probs=175.2
Q ss_pred EEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEeccC
Q 001541 776 IFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTL 852 (1057)
Q Consensus 776 Li~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~~~ 852 (1057)
||++|+||||. +.+++.+ ++++ +++ .|+.|++||||++.++.++++.+++. .||++||+||+.|++...
T Consensus 1 li~~DlDgTLl~~~~~~~~~~-~~~~-~~~----~gi~~viaTGR~~~~v~~~~~~l~l~--~~~~~I~~nGa~i~~~~~ 72 (236)
T TIGR02471 1 LIITDLDNTLLGDDEGLASFV-ELLR-GSG----DAVGFGIATGRSVESAKSRYAKLNLP--SPDVLIARVGTEIYYGPE 72 (236)
T ss_pred CeEEeccccccCCHHHHHHHH-HHHH-hcC----CCceEEEEeCCCHHHHHHHHHhCCCC--CCCEEEECCCceEEeCCC
Confidence 58999999994 4466655 6665 444 48999999999999999999999984 478899999999987542
Q ss_pred CCCCCCccccccchhhcccccchhhHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCCCCccHHHHHHH
Q 001541 853 NSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKV 932 (1057)
Q Consensus 853 ~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~ 932 (1057)
...+..|..++...|..+.+...+..+++.. .+.......++++|.. .++....+.++.+.
T Consensus 73 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~ 133 (236)
T TIGR02471 73 ------LQPDRFWQKHIDHDWRRQAVVEALADIPGLT------------LQDDQEQGPFKISYLL-DPEGEPILPQIRQR 133 (236)
T ss_pred ------CCCChhHHHHHhcCCCHHHHHHHHhcCCCcE------------eCChhcCCCeeEEEEE-CcccchHHHHHHHH
Confidence 2234556666777777655544443333221 1112223467787775 34333445677777
Q ss_pred HHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCCchhhhh
Q 001541 933 LRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSN 1012 (1057)
Q Consensus 933 l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~~~~~~ 1012 (1057)
+...+..+.++.+.+. ++||+|+++|||.||++|++++|++++++++ +||+.| | ++||+.+|+||+|+||. .+.
T Consensus 134 l~~~~~~~~~~~~~~~-~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~-~GD~~n-D-~~ml~~~~~~iav~na~--~~~ 207 (236)
T TIGR02471 134 LRQQSQAAKVILSCGW-FLDVLPLRASKGLALRYLSYRWGLPLEQILV-AGDSGN-D-EEMLRGLTLGVVVGNHD--PEL 207 (236)
T ss_pred HHhccCCEEEEEECCc-eEEEeeCCCChHHHHHHHHHHhCCCHHHEEE-EcCCcc-H-HHHHcCCCcEEEEcCCc--HHH
Confidence 7776667778888875 8999999999999999999999999999998 888888 8 99999999999999999 433
Q ss_pred hhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHHhCc
Q 001541 1013 QIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGL 1054 (1057)
Q Consensus 1013 ~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~~g~ 1054 (1057)
+..++. ...|||+++.++||+++|++|++
T Consensus 208 k~~a~~-------------~~~~v~~~~~~~Gv~~~i~~~~~ 236 (236)
T TIGR02471 208 EGLRHQ-------------QRIYFANNPHAFGILEGINHYDF 236 (236)
T ss_pred HHhhcC-------------CcEEEcCCCChhHHHHHHHhhCC
Confidence 444443 22357889999999999999985
No 78
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.95 E-value=1e-27 Score=284.76 Aligned_cols=363 Identities=14% Similarity=0.132 Sum_probs=242.4
Q ss_pred CCeEEEEccCCCcc-----cccccccCCCChhH------HHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHH
Q 001541 252 SGAYIIRIPFGPKD-----KYIAKELLWPHIPE------FVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDS 320 (1057)
Q Consensus 252 ~gv~i~rip~~p~~-----~~l~k~~l~~~l~~------f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~ 320 (1057)
.++.++.++..+.. ....+..+||.+.. +....+....++-+...+.+...- ...|+||.|......+
T Consensus 67 ~~~~~~~v~l~~~~~~~~y~~f~~~~LWp~~H~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~-~~~d~iwihDyhl~ll 145 (460)
T cd03788 67 GEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHYRLDLARFDREDWEAYVRVNRKFADAIAEVL-RPGDLVWVHDYHLLLL 145 (460)
T ss_pred CCceEEEeeCCHHHHHHHHHHhhhhhcchhhcCCCCccccCHHHHHHHHHHHHHHHHHHHHhc-CCCCEEEEeChhhhHH
Confidence 45667776654321 12346778886533 233444444444444444443321 1369999999877777
Q ss_pred HHHHHhc-CCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCC
Q 001541 321 AALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGF 399 (1057)
Q Consensus 321 a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~ 399 (1057)
+.++.+. .+.|+++..|..++.... +.. ++. ...+ ...+..+|.|...+......+......
T Consensus 146 p~~lr~~~~~~~i~~f~HipfP~~e~--~~~--lp~-----~~~l-------l~~~l~~D~igF~t~~~~~~Fl~~~~~- 208 (460)
T cd03788 146 PQMLRERGPDARIGFFLHIPFPSSEI--FRC--LPW-----REEL-------LRGLLGADLIGFQTERYARNFLSCCSR- 208 (460)
T ss_pred HHHHHhhCCCCeEEEEEeCCCCChHH--Hhh--CCC-----hHHH-------HHHHhcCCEEEECCHHHHHHHHHHHHH-
Confidence 7766554 468999999987654411 100 000 0011 124556999999998766665543211
Q ss_pred ChHHHHHHHHh--HhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHh-hhCCCCCc
Q 001541 400 DPVLERKLRAR--IKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMR-FFTNPRKP 476 (1057)
Q Consensus 400 ~~~~~~~l~~~--~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 476 (1057)
.|... ...++...|+.. ++.+||||||.+.|.+.... +......++ ....++++
T Consensus 209 ------~l~~~~~~~~~i~~~g~~~-~i~vip~GID~~~f~~~~~~----------------~~~~~~~~~~~~~~~~~~ 265 (460)
T cd03788 209 ------LLGLEVTDDGGVEYGGRRV-RVGAFPIGIDPDAFRKLAAS----------------PEVQERAAELRERLGGRK 265 (460)
T ss_pred ------HcCCcccCCceEEECCEEE-EEEEEeCeEcHHHHHHHhcC----------------chhHHHHHHHHHhcCCCE
Confidence 10000 013444445433 79999999999998753211 111111111 22246789
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcC-------CCCCE
Q 001541 477 VILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYD-------LYGQV 546 (1057)
Q Consensus 477 ~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~--~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~-------l~~~V 546 (1057)
+|+++||+++.||+..+|+||+.+.+..+.. +++| ++|.+..-+ . .+..++...+.+++.+++ +.+.+
T Consensus 266 ~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~-~-~~~~~l~~~l~~~v~~in~~~g~~~~~~v~ 343 (460)
T cd03788 266 LIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTD-V-PEYQELRREVEELVGRINGKFGTLDWTPVR 343 (460)
T ss_pred EEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcC-c-HHHHHHHHHHHHHHHHHHhccCCCCceeEE
Confidence 9999999999999999999999987644432 3444 455432100 0 011234555666555542 44556
Q ss_pred EeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCc----EEEcCCCCchhhhhcCCceEEeCCCCHHH
Q 001541 547 AYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLP----IVATKNGGPVDIHRVLDNGLLVDPHDQQS 622 (1057)
Q Consensus 547 ~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~P----VVat~~Gg~~eiv~~~~~Gllv~p~d~~~ 622 (1057)
.|.|.++.+++.++|+.| |+||+||..||||++++||||||+| ||+|+.+|..+. +.+|++|+|+|+++
T Consensus 344 ~~~g~v~~~el~~~y~~a----Dv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~lv~p~d~~~ 416 (460)
T cd03788 344 YLYRSLPREELAALYRAA----DVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGALLVNPYDIDE 416 (460)
T ss_pred EEeCCCCHHHHHHHHHhc----cEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh---cCCCEEECCCCHHH
Confidence 677899999999999999 9999999999999999999999999 999988887776 46899999999999
Q ss_pred HHHHHHHHHhCH-HHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 001541 623 VADALLKLVADK-QLWARCRQNGLKNIHLFSWPEHCKTYLSRI 664 (1057)
Q Consensus 623 la~aI~~ll~d~-~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~ 664 (1057)
++++|.++++++ ++++.+++++++.+.+|||..|+++|+..+
T Consensus 417 la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 417 VADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 999999999954 678888888899999999999999998764
No 79
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.95 E-value=1.3e-26 Score=270.18 Aligned_cols=325 Identities=17% Similarity=0.184 Sum_probs=213.5
Q ss_pred CcceEEEEcCCCchHHHHHHH-hcCCCCEEEEecCCchhhHHHHHHhhhc--c-------hHHHHHHHHHHHHHHHHHHH
Q 001541 305 VWPVAIHGHYADAGDSAALLS-GALNVPMLFTGHSLGRDKLEQLLKQARL--S-------RDEINATYKIMRRIEAEELS 374 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~-~~~~iP~V~t~H~l~~~~~~~l~~~g~~--~-------~~~~~~~yk~~~ri~~E~~~ 374 (1057)
..+||+|+|.|.++..+..++ ...++|+|+|.|....... +..|.. . ....-..+.+..+...|+.+
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~---l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~a 223 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRY---LCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAA 223 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccc---cccCCcccchhhhhcchhhhhhcccchHHHHHHHHH
Confidence 569999999999999999998 6689999999997643221 011110 0 00001112345666679999
Q ss_pred hhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCC
Q 001541 375 LDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDN 454 (1057)
Q Consensus 375 l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~ 454 (1057)
...||.|+++|+.+..+...+|+. +.++ |||||+|...|.+..... ..
T Consensus 224 a~~Ad~fttVS~it~~E~~~Ll~~----------------------~pd~--ViPNGid~~~f~~~~e~~--------~~ 271 (590)
T cd03793 224 AHCAHVFTTVSEITAYEAEHLLKR----------------------KPDV--VLPNGLNVKKFSALHEFQ--------NL 271 (590)
T ss_pred HhhCCEEEECChHHHHHHHHHhCC----------------------CCCE--EeCCCcchhhcccchhhh--------hh
Confidence 999999999999999888776543 3334 999999999987532110 00
Q ss_pred CCCCCCchHHH-----HHhhhCCCCCcEEEE-EeCCCC-CCCHHHHHHHHHhcccccC--CC--cEE-EE-EecC---CC
Q 001541 455 PASPDPPIWSE-----IMRFFTNPRKPVILA-LARPDP-KKNITTLVKAFGECRPLRE--LA--NLT-LI-MGNR---DG 518 (1057)
Q Consensus 455 ~~~~~~~~~~~-----~~~~~~~~~~~~Il~-vGRl~~-~Kgi~~Ll~A~~~l~~~~~--~~--~l~-LI-vG~~---~~ 518 (1057)
.+.....+... +.++...+++++++| +||+.+ .||++.+|+|+.++..... .. .++ +| +-.. -.
T Consensus 272 ~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~ 351 (590)
T cd03793 272 HAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFN 351 (590)
T ss_pred hHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcC
Confidence 11112222222 222344567888888 799999 9999999999999864211 11 232 33 3211 11
Q ss_pred Ccccchhh---------HHH--------------------------------------------------------HHHH
Q 001541 519 IDEMSSTS---------ASV--------------------------------------------------------LLSV 533 (1057)
Q Consensus 519 ~~~~~~~~---------~~~--------------------------------------------------------~~~l 533 (1057)
.+.++.+. .++ .+.|
T Consensus 352 ~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~i 431 (590)
T cd03793 352 VESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPI 431 (590)
T ss_pred HHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHH
Confidence 11111110 000 0112
Q ss_pred HHHHHHcCCCC------CEEeC-CCCC------CCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCC
Q 001541 534 LKLIDKYDLYG------QVAYP-KHHK------QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG 600 (1057)
Q Consensus 534 ~~l~~~~~l~~------~V~f~-g~v~------~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~G 600 (1057)
...+.+.+|.+ +|.|+ -+++ ..+..++|+.| |++|+||++||||++++||||||+|||+|+.+
T Consensus 432 l~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~----dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~ 507 (590)
T cd03793 432 LNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGC----HLGVFPSYYEPWGYTPAECTVMGIPSITTNLS 507 (590)
T ss_pred HHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhc----eEEEeccccCCCCcHHHHHHHcCCCEEEccCc
Confidence 22233333322 13342 2332 23688999999 99999999999999999999999999999999
Q ss_pred Cc----hhhhhcC-CceEEeC-------CCCHHHHHHHHHHHHhCHHHHHHHHHHHH--HHhhcCCHHHHHHHHHHHHHc
Q 001541 601 GP----VDIHRVL-DNGLLVD-------PHDQQSVADALLKLVADKQLWARCRQNGL--KNIHLFSWPEHCKTYLSRIAG 666 (1057)
Q Consensus 601 g~----~eiv~~~-~~Gllv~-------p~d~~~la~aI~~ll~d~~~~~~~~~~~~--~~v~~fsw~~~a~~~l~~~~~ 666 (1057)
|+ .|++.++ ..|++|. +.+.++|+++|.++++. +.++++.+.++ +..+.|+|+..+..|.+.+..
T Consensus 508 gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~ 586 (590)
T cd03793 508 GFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQL 586 (590)
T ss_pred chhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 98 5665544 3577776 45688999999998864 46666666655 555899999999999999976
Q ss_pred ccC
Q 001541 667 CKP 669 (1057)
Q Consensus 667 ~~~ 669 (1057)
.++
T Consensus 587 Al~ 589 (590)
T cd03793 587 ALS 589 (590)
T ss_pred Hhh
Confidence 543
No 80
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.95 E-value=2.8e-26 Score=267.26 Aligned_cols=449 Identities=19% Similarity=0.207 Sum_probs=289.6
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCC------C
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTP------R 239 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~------~ 239 (1057)
|||++++.... +--.+||..-.+..|.++|++.| ++|.|+.+.+. .+...+....+.+.. .
T Consensus 1 M~Il~v~~E~~---------p~vK~GGLaDv~~alpk~L~~~g--~~v~v~lP~y~--~~~~~~~~~~~~~~~~~~~~~~ 67 (487)
T COG0297 1 MKILFVASEIF---------PFVKTGGLADVVGALPKALAKRG--VDVRVLLPSYP--KVQKEWRDLLKVVGKFGVLKGG 67 (487)
T ss_pred Ccceeeeeeec---------CccccCcHHHHHHHhHHHHHhcC--CeEEEEcCCch--hhhhhhccccceeeEeeeeecc
Confidence 78999886554 22589999999999999999999 99999988763 222222211111000 0
Q ss_pred CCCccccccCC-CCCeEEEEccCCCccccccc--ccCCCChhHHHHHHHHHHHHHHHHHHhhhcC-CCCCcceEEEEcCC
Q 001541 240 NSDDFMDDMGE-SSGAYIIRIPFGPKDKYIAK--ELLWPHIPEFVDGALNHIIRMSNVLGEQIGG-GKPVWPVAIHGHYA 315 (1057)
Q Consensus 240 ~~~~~~~~~~~-~~gv~i~rip~~p~~~~l~k--~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~-~~~~~pDvIh~h~~ 315 (1057)
....+..+... ..++.+.-+.. + .+..+ ...+.+-+... ++.. ..++..+.+.. .....|||||+|.|
T Consensus 68 ~~~~~~~~~~~~~~~v~~~lid~-~--~~f~r~~~~~~~~~d~~~----Rf~~-F~~a~~~~~~~~~~~~~pDIvH~hDW 139 (487)
T COG0297 68 RAQLFIVKEYGKDGGVDLYLIDN-P--ALFKRPDSTLYGYYDNAE----RFAF-FSLAAAELAPLGLISWLPDIVHAHDW 139 (487)
T ss_pred cceEEEEEeecccCCCcEEEecC-h--hhcCccccccCCCCcHHH----HHHH-HHHHHHHHhhhcCCCCCCCEEEeecH
Confidence 00000011111 11133333321 1 12222 12333332222 2111 12222222211 11146999999999
Q ss_pred CchHHHHHHHh----cCCCCEEEEecCCchhhHHH--HHHhhhcchHHHHHHH--HHHHHHHHHHHHhhcCCEEEecCHH
Q 001541 316 DAGDSAALLSG----ALNVPMLFTGHSLGRDKLEQ--LLKQARLSRDEINATY--KIMRRIEAEELSLDASEIVITSTRQ 387 (1057)
Q Consensus 316 ~~~~~a~~l~~----~~~iP~V~t~H~l~~~~~~~--l~~~g~~~~~~~~~~y--k~~~ri~~E~~~l~~ad~Vi~~S~~ 387 (1057)
.++.+..+++. ...+|.|+|+|++....... ....-.++..... .+ ...-.+..++-.+..||.|.++|..
T Consensus 140 qt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~-~~~l~~~~~~~~lK~gi~~ad~vttVSpt 218 (487)
T COG0297 140 QTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYA-SFGLEFYGQISFLKGGLYYADAVTTVSPT 218 (487)
T ss_pred HHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhh-hceeeecCcchhhhhhheeccEEEEECHH
Confidence 99999999988 45799999999985543221 1111111111111 00 0001223466789999999999999
Q ss_pred HHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHH-
Q 001541 388 EIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEI- 466 (1057)
Q Consensus 388 ~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 466 (1057)
.+++++ ...+...+...|+.+. | ++.-|-||+|.+.+.|....... ..+....-.........+
T Consensus 219 Ya~Ei~--t~~~g~gl~g~l~~~~-----~------~l~GI~NgiD~~~wnp~~d~~~~--~~y~~~~~~~k~~nk~~L~ 283 (487)
T COG0297 219 YAGEIY--TPEYGEGLEGLLSWRS-----G------KLSGILNGIDYDLWNPETDPYIA--ANYSAEVLPAKAENKVALQ 283 (487)
T ss_pred HHHhhc--cccccccchhhhhhcc-----c------cEEEEEeeEEecccCcccccchh--ccCCccchhhhHHHHHHHH
Confidence 998887 2333333334443333 2 88999999999999876533110 000000000111222223
Q ss_pred HhhhCC--CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCC
Q 001541 467 MRFFTN--PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYG 544 (1057)
Q Consensus 467 ~~~~~~--~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~ 544 (1057)
.+++.. .+.|++.++||+..+||++.+++++..+.+.. ..+ +++|.++ ..+.+.+..++.++..
T Consensus 284 ~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~~-vilG~gd---------~~le~~~~~la~~~~~-- 349 (487)
T COG0297 284 ERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQL-VLLGTGD---------PELEEALRALASRHPG-- 349 (487)
T ss_pred HHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ceE-EEEecCc---------HHHHHHHHHHHHhcCc--
Confidence 334433 26799999999999999999999999998643 222 5778883 3467788888888864
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhc--------CCceEEeC
Q 001541 545 QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV--------LDNGLLVD 616 (1057)
Q Consensus 545 ~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~--------~~~Gllv~ 616 (1057)
++...-..+..-...+|+.| |++++||.+||||++-++||.+|++.|+..+||.+|.|.+ ..+|+++.
T Consensus 350 ~~~~~i~~~~~la~~i~aga----D~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~ 425 (487)
T COG0297 350 RVLVVIGYDEPLAHLIYAGA----DVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFL 425 (487)
T ss_pred eEEEEeeecHHHHHHHHhcC----CEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEe
Confidence 56655555556677888888 9999999999999999999999999999999999999875 47899999
Q ss_pred CCCHHHHHHHHHHHHh---CHHH-HHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCCC
Q 001541 617 PHDQQSVADALLKLVA---DKQL-WARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRH 671 (1057)
Q Consensus 617 p~d~~~la~aI~~ll~---d~~~-~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~~~~ 671 (1057)
+.++++++.+|.+++. .++. |+.+..+++. ..|+|+..+++|.++|+.++...
T Consensus 426 ~~~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~--~d~sw~~sa~~y~~lY~~~~~~~ 482 (487)
T COG0297 426 QTNPDHLANALRRALVLYRAPPLLWRKVQPNAMG--ADFSWDLSAKEYVELYKPLLSKP 482 (487)
T ss_pred cCCHHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc--cccCchhHHHHHHHHHHHHhccc
Confidence 9999999999999887 4444 8888888877 79999999999999999987643
No 81
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.95 E-value=1.6e-27 Score=264.40 Aligned_cols=244 Identities=13% Similarity=0.108 Sum_probs=159.9
Q ss_pred CcceEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEE
Q 001541 772 RRKHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLY 848 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~ 848 (1057)
+.+++||+||||||. +.+++.++++|++++++ |+.|+|||||++.++.+++++++++ .+++||+||+.||
T Consensus 5 ~~~~lI~~DlDGTLL~~~~~i~~~~~~ai~~l~~~----Gi~~viaTGR~~~~i~~~~~~l~~~---~~~~I~~NGa~I~ 77 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDSHTYDWQPAAPWLTRLREA----QVPVILCSSKTAAEMLPLQQTLGLQ---GLPLIAENGAVIQ 77 (271)
T ss_pred CCCeEEEEeCccCCcCCCCcCcHHHHHHHHHHHHc----CCeEEEEcCCCHHHHHHHHHHhCCC---CCcEEEeCCCEEE
Confidence 567999999999994 45788999999999987 9999999999999999999999983 1469999999999
Q ss_pred eccCCCCCCCccccccchhhcccccchhhHHHHHHHhhhc---cccccccc-c------ccccc----ccccccCcceEE
Q 001541 849 YSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQ---VTDKKAES-G------EKVLT----PAEQLSTNYCYA 914 (1057)
Q Consensus 849 ~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~---~~~~~~~~-~------~~~~~----~~~~~~~~~k~~ 914 (1057)
..........+ ..+ ......+.+..++...... ........ . ..... .........++.
T Consensus 78 ~~~~~~~~~~~---~~~----~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (271)
T PRK03669 78 LDEQWQDHPDF---PRI----ISGISHGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLI 150 (271)
T ss_pred ecCcccCCCCc---eEe----ecCCCHHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeE
Confidence 76321100000 000 1111122222222111100 00000000 0 00000 000000112222
Q ss_pred EEecCCCCCccHHHHHHHHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCC---CcccEEEEecCCCCCCcc
Q 001541 915 FSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGV---ELSKMVVFVGESGDTDYE 991 (1057)
Q Consensus 915 ~~~~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI---~~e~viaf~GD~~n~D~~ 991 (1057)
+. .. ...+.++.+.+... .++++. .+. ++||+|+++|||+||++|++++|| +++++|| |||+.| | +
T Consensus 151 ~~-~~---~~~~~~~~~~l~~~--~~~~~~-~~~-~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~via-fGDs~N-D-i 219 (271)
T PRK03669 151 WR-DS---DERMAQFTARLAEL--GLQFVQ-GAR-FWHVLDASAGKDQAANWLIATYQQLSGTRPTTLG-LGDGPN-D-A 219 (271)
T ss_pred ec-CC---HHHHHHHHHHHHHC--CCEEEe-cCe-eEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEE-EcCCHH-H-H
Confidence 22 11 12344566666542 456554 333 899999999999999999999999 9999999 888888 8 9
Q ss_pred ccccCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHHhC
Q 001541 992 GLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 1053 (1057)
Q Consensus 992 eML~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~~g 1053 (1057)
+||+.+|+||||||+....+ -++..+..++|+|...++|||+++|+||.
T Consensus 220 ~Ml~~ag~gvAM~~~~~~~~-------------~l~~~~~~~~~~~~~~~~~g~~~~l~~~~ 268 (271)
T PRK03669 220 PLLDVMDYAVVVKGLNREGV-------------HLQDDDPARVYRTQREGPEGWREGLDHFF 268 (271)
T ss_pred HHHHhCCEEEEecCCCCCCc-------------ccccccCCceEeccCCCcHHHHHHHHHHH
Confidence 99999999999999872211 12234567889999999999999999974
No 82
>PHA01630 putative group 1 glycosyl transferase
Probab=99.95 E-value=1.9e-26 Score=261.92 Aligned_cols=254 Identities=13% Similarity=0.083 Sum_probs=186.0
Q ss_pred EcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHH-hhcCCEEEecCHHHHH
Q 001541 312 GHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELS-LDASEIVITSTRQEIE 390 (1057)
Q Consensus 312 ~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~-l~~ad~Vi~~S~~~~~ 390 (1057)
.|+.......+......|+|+|++.|+..+ +.+. .+.+. .+.+|.|+++|+...+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~----------------------l~~~--~~~~~~~~~ad~ii~~S~~~~~ 107 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTDA----------------------ISHT--ALYFFRNQPVDEIVVPSQWSKN 107 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeech----------------------hhHH--HHHHHhhccCCEEEECCHHHHH
Confidence 555445555555556679999999998421 1111 13345 6889999999998777
Q ss_pred HHHhhhCCCChHHHHHHHHhHhccccccCCC-CCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhh
Q 001541 391 EQWRLYDGFDPVLERKLRARIKRNVSCYGKF-MPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRF 469 (1057)
Q Consensus 391 ~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~-~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (1057)
.+.... .. ..++.|||||+|.+.|.+....
T Consensus 108 ~l~~~g-----------------------~~~~~~i~vIpNGVd~~~f~~~~~~-------------------------- 138 (331)
T PHA01630 108 AFYTSG-----------------------LKIPQPIYVIPHNLNPRMFEYKPKE-------------------------- 138 (331)
T ss_pred HHHHcC-----------------------CCCCCCEEEECCCCCHHHcCCCccc--------------------------
Confidence 653321 11 1379999999999888643211
Q ss_pred hCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEe
Q 001541 470 FTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY 548 (1057)
Q Consensus 470 ~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f 548 (1057)
..+..++++.|++.++||++.||+|+..+.+. .+++.+ ++|++.. + .++ .++.+ +
T Consensus 139 --~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~--~~~~~llivG~~~~--~---------~~l------~~~~~---~ 194 (331)
T PHA01630 139 --KPHPCVLAILPHSWDRKGGDIVVKIFHELQNE--GYDFYFLIKSSNML--D---------PRL------FGLNG---V 194 (331)
T ss_pred --cCCCEEEEEeccccccCCHHHHHHHHHHHHhh--CCCEEEEEEeCccc--c---------hhh------ccccc---e
Confidence 12345666778899999999999999998743 345554 6775432 1 011 12222 3
Q ss_pred CCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCC-----------
Q 001541 549 PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDP----------- 617 (1057)
Q Consensus 549 ~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p----------- 617 (1057)
.+.++.+++..+|+.| |+||+||..|+||++++||||||+|||+|+.||..|++.++.||+++++
T Consensus 195 ~~~v~~~~l~~~y~~a----Dv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~ 270 (331)
T PHA01630 195 KTPLPDDDIYSLFAGC----DILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNP 270 (331)
T ss_pred eccCCHHHHHHHHHhC----CEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCC
Confidence 4568889999999999 9999999999999999999999999999999999999999888777642
Q ss_pred --------CCHHHHHHHHHHHHhCH--H-HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHc
Q 001541 618 --------HDQQSVADALLKLVADK--Q-LWARCRQNGLKNIHLFSWPEHCKTYLSRIAG 666 (1057)
Q Consensus 618 --------~d~~~la~aI~~ll~d~--~-~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~ 666 (1057)
.|.+++++++.+++.++ + .++.+.++++...++|||+.++++|+++|++
T Consensus 271 ~~~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 271 IHVGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred cccccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 37888999999999863 4 4445555555555899999999999999974
No 83
>PLN02887 hydrolase family protein
Probab=99.95 E-value=4.1e-27 Score=280.94 Aligned_cols=236 Identities=13% Similarity=0.110 Sum_probs=157.6
Q ss_pred CcceEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCC-------eEEe
Q 001541 772 RRKHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFD-------AFIC 841 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D-------~lI~ 841 (1057)
...|+||+||||||. +.+++.++++|++++++ |+.|+|||||++.++.++++++++. .++ ++||
T Consensus 306 ~~iKLIa~DLDGTLLn~d~~Is~~t~eAI~kl~ek----Gi~~vIATGR~~~~i~~~l~~L~l~--~~~~~I~~~~p~I~ 379 (580)
T PLN02887 306 PKFSYIFCDMDGTLLNSKSQISETNAKALKEALSR----GVKVVIATGKARPAVIDILKMVDLA--GKDGIISESSPGVF 379 (580)
T ss_pred cCccEEEEeCCCCCCCCCCccCHHHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHhCcc--cccceEeecccEEe
Confidence 457899999999993 67999999999999997 9999999999999999999999873 123 3567
Q ss_pred CCCcEEEeccCCCCCCCccccccchhhcccccchhhHHHHHHH---------------------------hhhccccccc
Q 001541 842 NSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVR---------------------------WASQVTDKKA 894 (1057)
Q Consensus 842 ~nGa~I~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~---------------------------~~~~~~~~~~ 894 (1057)
+||+.||....... + ......+.+.+++.. ..........
T Consensus 380 ~NGA~I~d~~g~~I---------~----~~~L~~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~ 446 (580)
T PLN02887 380 LQGLLVYGRQGREI---------Y----RSNLDQEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKA 446 (580)
T ss_pred ecCeEEEECCCcEE---------E----EEeCCHHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccc
Confidence 89999986432110 0 000011111111100 0000000000
Q ss_pred ccccccccccccccCcceEEEEecCCCCCccHHHHHHHHHH-hcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCC
Q 001541 895 ESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRI-QALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGV 973 (1057)
Q Consensus 895 ~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~l~~-~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI 973 (1057)
. ....+.+........|+.+.. .++ ....++.+.+.. ....++++.+.++ ++||+|+++|||.||++||+++||
T Consensus 447 ~-~i~~l~~~~~~~~i~Ki~~~~-~~e--~~~~~l~~~l~~~~~~~~~v~~S~~~-~lEI~p~gvSKG~ALk~L~e~lGI 521 (580)
T PLN02887 447 E-IMSSVDQLLAAADIQKVIFLD-TAE--GVSSVLRPYWSEATGDRANVVQAQPD-MLEIVPPGTSKGNGVKMLLNHLGV 521 (580)
T ss_pred c-ccCCHHHhhcccCeeEEEEEc-ChH--HHHHHHHHHHHHHhcCcEEEEEecCc-EEEEecCCCCHHHHHHHHHHHcCC
Confidence 0 000000000011233443331 111 112234444433 2346788888875 999999999999999999999999
Q ss_pred CcccEEEEecCCCCCCccccccCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHHhC
Q 001541 974 ELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 1053 (1057)
Q Consensus 974 ~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~~g 1053 (1057)
+++++|| |||+.| | ++||+.+|+|||||||. .+.|..|+ +||.++++|||+++|++|-
T Consensus 522 ~~eeviA-FGDs~N-D-IeMLe~AG~gVAMgNA~--eeVK~~Ad-----------------~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 522 SPDEIMA-IGDGEN-D-IEMLQLASLGVALSNGA--EKTKAVAD-----------------VIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred CHHHEEE-Eecchh-h-HHHHHHCCCEEEeCCCC--HHHHHhCC-----------------EEeCCCCcCHHHHHHHHhh
Confidence 9999999 888888 8 99999999999999999 33344444 5999999999999999873
No 84
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.95 E-value=7.1e-27 Score=252.89 Aligned_cols=225 Identities=17% Similarity=0.130 Sum_probs=155.2
Q ss_pred ceEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEec
Q 001541 774 KHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 850 (1057)
Q Consensus 774 kkLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~ 850 (1057)
.|+|++|+||||. +.+++.++++|++++++ |+.|+|||||++..+.++++.++++ +++||+||+.|+..
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~i~~nGa~i~~~ 74 (230)
T PRK01158 3 IKAIAIDIDGTITDKDRRLSLKAVEAIRKAEKL----GIPVILATGNVLCFARAAAKLIGTS----GPVIAENGGVISVG 74 (230)
T ss_pred eeEEEEecCCCcCCCCCccCHHHHHHHHHHHHC----CCEEEEEcCCchHHHHHHHHHhCCC----CcEEEecCeEEEEc
Confidence 5899999999993 56899999999999986 9999999999999999999999983 57999999999975
Q ss_pred cCCCCCCCccccccchhhcccccchhhHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCCCCccHHHHH
Q 001541 851 TLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELR 930 (1057)
Q Consensus 851 ~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~ 930 (1057)
... .. .+...+. .....+..+........ ..+..........++. ... . ...+++.
T Consensus 75 ~~~----~~----~~~~~~~------~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~-~---~~~~~~~ 130 (230)
T PRK01158 75 FDG----KR----IFLGDIE------ECEKAYSELKKRFPEAS-----TSLTKLDPDYRKTEVA-LRR-T---VPVEEVR 130 (230)
T ss_pred CCC----CE----EEEcchH------HHHHHHHHHHHhccccc-----eeeecCCcccccceee-ecc-c---ccHHHHH
Confidence 211 00 1111111 11122211111100000 0000000000011111 111 1 1234556
Q ss_pred HHHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCCchhh
Q 001541 931 KVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSS 1010 (1057)
Q Consensus 931 ~~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~~~~ 1010 (1057)
+.+...+..+.++.+ .. ++||+|+++|||.||++|++++|++++++++ +||+.| | ++||+.+|+||||+||. .
T Consensus 131 ~~l~~~~~~~~~~~~-~~-~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~-~GD~~N-D-i~m~~~ag~~vam~Na~--~ 203 (230)
T PRK01158 131 ELLEELGLDLEIVDS-GF-AIHIKSPGVNKGTGLKKLAELMGIDPEEVAA-IGDSEN-D-LEMFEVAGFGVAVANAD--E 203 (230)
T ss_pred HHHHHcCCcEEEEec-ce-EEEEeeCCCChHHHHHHHHHHhCCCHHHEEE-ECCchh-h-HHHHHhcCceEEecCcc--H
Confidence 666554444555444 33 7999999999999999999999999999999 889999 9 99999999999999999 3
Q ss_pred hhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHHhCc
Q 001541 1011 SNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGL 1054 (1057)
Q Consensus 1011 ~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~~g~ 1054 (1057)
+.|..+ .+||.++++|||+++|++|.+
T Consensus 204 ~vk~~a-----------------~~v~~~n~~~Gv~~~l~~~~~ 230 (230)
T PRK01158 204 ELKEAA-----------------DYVTEKSYGEGVAEAIEHLLL 230 (230)
T ss_pred HHHHhc-----------------ceEecCCCcChHHHHHHHHhC
Confidence 333333 369999999999999999864
No 85
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.95 E-value=3.3e-26 Score=265.28 Aligned_cols=273 Identities=25% Similarity=0.325 Sum_probs=210.8
Q ss_pred CcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEec
Q 001541 305 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 384 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~ 384 (1057)
.++|+|+++....... ..+......+.++++|+.......... ...+...++. ....+..+|.||++
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~~------~~~~~~~~~~------~~~~~~~~d~ii~~ 164 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNNDPV------HSLINNFYEY------VFENLDKVDGVIVA 164 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCccccc------ccccchhhHH------HHhChhhCCEEEEc
Confidence 4699999988644333 233444566788999975332211000 0001111211 12246889999999
Q ss_pred CHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHH
Q 001541 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 464 (1057)
Q Consensus 385 S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1057)
|+...+.+...+... .++.+||+|++...+.+...
T Consensus 165 s~~~~~~l~~~~~~~-----------------------~~v~~ip~g~~~~~~~~~~~---------------------- 199 (372)
T cd04949 165 TEQQKQDLQKQFGNY-----------------------NPIYTIPVGSIDPLKLPAQF---------------------- 199 (372)
T ss_pred cHHHHHHHHHHhCCC-----------------------CceEEEcccccChhhcccch----------------------
Confidence 998877765544321 15899999999877654210
Q ss_pred HHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCC
Q 001541 465 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 543 (1057)
Q Consensus 465 ~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~ 543 (1057)
.....+.|+++||+.+.||++.+|+|+..+.+. .+++.| |+|.++. ...+..++..+++.
T Consensus 200 ------~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~--~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~ 260 (372)
T cd04949 200 ------KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQ--VPDATLDIYGYGDE-----------EEKLKELIEELGLE 260 (372)
T ss_pred ------hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHh--CCCcEEEEEEeCch-----------HHHHHHHHHHcCCc
Confidence 023567899999999999999999999999754 345554 7787764 34566677888999
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCC-CchhhhhcCCceEEeCCCCHHH
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG-GPVDIHRVLDNGLLVDPHDQQS 622 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~G-g~~eiv~~~~~Gllv~p~d~~~ 622 (1057)
.+|.|.|+ .+++..+|+.| |++|+||..||||++++||||||+|||+++.+ |+.+++.++.+|++++++|+++
T Consensus 261 ~~v~~~g~--~~~~~~~~~~a----d~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~ 334 (372)
T cd04949 261 DYVFLKGY--TRDLDEVYQKA----QLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDIEA 334 (372)
T ss_pred ceEEEcCC--CCCHHHHHhhh----hEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcHHH
Confidence 99999995 67899999999 99999999999999999999999999999987 8999999999999999999999
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHH
Q 001541 623 VADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTY 660 (1057)
Q Consensus 623 la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~ 660 (1057)
++++|..++.+++.++++++++++.+++|||+.++++|
T Consensus 335 la~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 335 LAEAIIELLNDPKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 99999999999999999999999998899999998764
No 86
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.95 E-value=3.4e-27 Score=254.48 Aligned_cols=218 Identities=15% Similarity=0.166 Sum_probs=151.9
Q ss_pred EEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEeccCC
Q 001541 777 FVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTLN 853 (1057)
Q Consensus 777 i~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~~~~ 853 (1057)
|++||||||. +.+++.++++|++++++ |+.|+|||||++.++.++++.+++ ++++||+||+.|++....
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~----Gi~~~~aTGR~~~~~~~~~~~l~~----~~~~i~~nGa~i~~~~~~ 72 (225)
T TIGR01482 1 IASDIDGTLTDPNRAINESALEAIRKAESV----GIPVVLVTGNSVQFARALAKLIGT----PDPVIAENGGEISYNEGM 72 (225)
T ss_pred CeEeccCccCCCCcccCHHHHHHHHHHHHC----CCEEEEEcCCchHHHHHHHHHhCC----CCeEEEecCcEEEeCCCC
Confidence 5899999993 56999999999999986 999999999999999999999997 468999999999986421
Q ss_pred CCCCCccccccchhhcccccchhhHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCCCCccHHHHHHHH
Q 001541 854 SEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVL 933 (1057)
Q Consensus 854 ~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~l 933 (1057)
...|...+...|....+........ ....+.......+++.+. . ..+.+...+
T Consensus 73 --------~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~ 125 (225)
T TIGR01482 73 --------DDIFLAYLEEEWFLDIVIAKTFPFS------------RLKVQYPRRASLVKMRYG----I---DVDTVREII 125 (225)
T ss_pred --------ceEEecccCHHHHHHHHHhcccchh------------hhccccccccceEEEeec----C---CHHHHHHHH
Confidence 1122222322222111111000000 000000011112222221 1 112334444
Q ss_pred HHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCCchhhhhh
Q 001541 934 RIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQ 1013 (1057)
Q Consensus 934 ~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~~~~~~~ 1013 (1057)
...+..+.+. +.+. ++||+|+++|||.||++|++++|++++++++ +||+.| | ++||+.+|+||||+||. .+.+
T Consensus 126 ~~~~~~~~~~-~~~~-~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~-~GD~~N-D-i~m~~~ag~~vam~Na~--~~~k 198 (225)
T TIGR01482 126 KELGLNLVAV-DSGF-DIHILPQGVNKGVAVKKLKEKLGIKPGETLV-CGDSEN-D-IDLFEVPGFGVAVANAQ--PELK 198 (225)
T ss_pred HhcCceEEEe-cCCc-EEEEeeCCCCHHHHHHHHHHHhCCCHHHEEE-ECCCHh-h-HHHHHhcCceEEcCChh--HHHH
Confidence 4434334333 4454 8999999999999999999999999999999 888999 9 99999999999999998 3334
Q ss_pred hhhcCCCCCCCCCcCCCCCeEEccCCCChHH----HHHHHHHhC
Q 001541 1014 IHANRSYPLSDVMPIDSPNIVQTPEDCTTSD----IRSSLEQLG 1053 (1057)
Q Consensus 1014 ~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dg----I~~aL~~~g 1053 (1057)
.+|+ +||.++.++| |+++|++||
T Consensus 199 ~~A~-----------------~vt~~~~~~G~~~~v~~~l~~~~ 225 (225)
T TIGR01482 199 EWAD-----------------YVTESPYGEGGAEAIGEILQAIG 225 (225)
T ss_pred HhcC-----------------eecCCCCCCcHHHHHHHHHHhhC
Confidence 4444 5999999999 999999987
No 87
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.94 E-value=5.1e-25 Score=254.34 Aligned_cols=344 Identities=17% Similarity=0.143 Sum_probs=242.2
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccc
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 245 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1057)
|||++++ ...||.++...+|+++|.++| |+|++++.... +. + .
T Consensus 2 ~~i~i~~---------------~g~gG~~~~~~~la~~L~~~g--~ev~vv~~~~~-~~----~-~-------------- 44 (357)
T PRK00726 2 KKILLAG---------------GGTGGHVFPALALAEELKKRG--WEVLYLGTARG-ME----A-R-------------- 44 (357)
T ss_pred cEEEEEc---------------CcchHhhhHHHHHHHHHHhCC--CEEEEEECCCc-hh----h-h--------------
Confidence 7888886 136899999999999999999 99999987431 00 0 0
Q ss_pred cccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHH
Q 001541 246 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 325 (1057)
Q Consensus 246 ~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~ 325 (1057)
..+..|+++++++..... ....+..+.... ..+..+.++.+.+.+ .+|||||+|.+..+..+.+++
T Consensus 45 --~~~~~g~~~~~~~~~~~~----~~~~~~~l~~~~-~~~~~~~~~~~~ik~-------~~pDvv~~~~~~~~~~~~~~~ 110 (357)
T PRK00726 45 --LVPKAGIEFHFIPSGGLR----RKGSLANLKAPF-KLLKGVLQARKILKR-------FKPDVVVGFGGYVSGPGGLAA 110 (357)
T ss_pred --ccccCCCcEEEEeccCcC----CCChHHHHHHHH-HHHHHHHHHHHHHHh-------cCCCEEEECCCcchhHHHHHH
Confidence 001137888888764321 111111111111 112233333333333 579999999876667777777
Q ss_pred hcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHH
Q 001541 326 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1057)
Q Consensus 326 ~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~ 405 (1057)
+..++|+|++.|+..... .+++.+..+|.+++++++.. .. .
T Consensus 111 ~~~~~p~v~~~~~~~~~~--------------------------~~r~~~~~~d~ii~~~~~~~---~~----~------ 151 (357)
T PRK00726 111 RLLGIPLVIHEQNAVPGL--------------------------ANKLLARFAKKVATAFPGAF---PE----F------ 151 (357)
T ss_pred HHcCCCEEEEcCCCCccH--------------------------HHHHHHHHhchheECchhhh---hc----c------
Confidence 888999999888643210 12345677899999887432 11 1
Q ss_pred HHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCC
Q 001541 406 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 485 (1057)
Q Consensus 406 ~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~ 485 (1057)
+..++.+||||++.+.+.+... ..++...++.++|+++|+..
T Consensus 152 ---------------~~~~i~vi~n~v~~~~~~~~~~-----------------------~~~~~~~~~~~~i~~~gg~~ 193 (357)
T PRK00726 152 ---------------FKPKAVVTGNPVREEILALAAP-----------------------PARLAGREGKPTLLVVGGSQ 193 (357)
T ss_pred ---------------CCCCEEEECCCCChHhhcccch-----------------------hhhccCCCCCeEEEEECCcH
Confidence 1238999999999876543110 01122245678899999998
Q ss_pred CCCCHHHHH-HHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHh
Q 001541 486 PKKNITTLV-KAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLA 564 (1057)
Q Consensus 486 ~~Kgi~~Ll-~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~A 564 (1057)
..|++..++ +|+.++... +...+++|+++. +.+.+..+ +++. |.|.|++ ++++++|..|
T Consensus 194 ~~~~~~~~l~~a~~~~~~~---~~~~~~~G~g~~------------~~~~~~~~-~~~~--v~~~g~~--~~~~~~~~~~ 253 (357)
T PRK00726 194 GARVLNEAVPEALALLPEA---LQVIHQTGKGDL------------EEVRAAYA-AGIN--AEVVPFI--DDMAAAYAAA 253 (357)
T ss_pred hHHHHHHHHHHHHHHhhhC---cEEEEEcCCCcH------------HHHHHHhh-cCCc--EEEeehH--hhHHHHHHhC
Confidence 888876665 999888531 333347788752 33444445 6663 9999996 7999999999
Q ss_pred hcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC--------chhhhhcCCceEEeCCCC--HHHHHHHHHHHHhCH
Q 001541 565 AKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG--------PVDIHRVLDNGLLVDPHD--QQSVADALLKLVADK 634 (1057)
Q Consensus 565 a~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg--------~~eiv~~~~~Gllv~p~d--~~~la~aI~~ll~d~ 634 (1057)
|++|.++ .+++++|||++|+|||++..++ ..+.+.+.++|+++++.| +++++++|.++++++
T Consensus 254 ----d~~i~~~----g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~ 325 (357)
T PRK00726 254 ----DLVICRA----GASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDP 325 (357)
T ss_pred ----CEEEECC----CHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCH
Confidence 9999876 2689999999999999987643 235677778999999888 999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 001541 635 QLWARCRQNGLKNIHLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 635 ~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~ 665 (1057)
+.+++|++++++..+.++...+++.++++++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 326 ERLEAMAEAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred HHHHHHHHHHHhcCCcCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999988775
No 88
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.94 E-value=2.5e-26 Score=250.59 Aligned_cols=225 Identities=15% Similarity=0.206 Sum_probs=154.5
Q ss_pred EEEEecCCC---CCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEeccCC
Q 001541 777 FVISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTLN 853 (1057)
Q Consensus 777 i~~DiDGTL---~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~~~~ 853 (1057)
||+|+|||| ...+++.++++|+.++++ |+.|+|||||++..+.++++++++. +++||+||+.|+.....
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~----g~~~~i~TGR~~~~~~~~~~~~~~~----~~~I~~nGa~i~~~~~~ 72 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGKISPETIEALKELQEK----GIKLVIATGRSYSSIKRLLKELGID----DYFICSNGALIDDPKGK 72 (254)
T ss_dssp EEEECCTTTCSTTSSSCHHHHHHHHHHHHT----TCEEEEECSSTHHHHHHHHHHTTHC----SEEEEGGGTEEEETTTE
T ss_pred cEEEECCceecCCCeeCHHHHHHHHhhccc----ceEEEEEccCcccccccccccccch----hhhcccccceeeecccc
Confidence 689999999 367999999999999987 9999999999999999999999983 68999999999443211
Q ss_pred CCCCCccccccchhhcccccchhhHHHHHHHhhhccccccccccc-----------------------ccc--ccccccc
Q 001541 854 SEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGE-----------------------KVL--TPAEQLS 908 (1057)
Q Consensus 854 ~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~-----------------------~~~--~~~~~~~ 908 (1057)
. . +.. ....+.+..++................ ... .......
T Consensus 73 ~-----l----~~~----~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (254)
T PF08282_consen 73 I-----L----YEK----PIDSDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDE 139 (254)
T ss_dssp E-----E----EEE----SB-HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCS
T ss_pred c-----c----hhh----heeccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccc
Confidence 0 0 000 011111111111110000000000000 000 0011223
Q ss_pred CcceEEEEecCCCCCccHHHHHHHHHHhc-CcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCC
Q 001541 909 TNYCYAFSVQKPGMTPPVKELRKVLRIQA-LRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGD 987 (1057)
Q Consensus 909 ~~~k~~~~~~~~~~~~~~~el~~~l~~~~-~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n 987 (1057)
...++.+. .++ ..+..+.+.+.... ..+.++.+.+. ++||+|+++|||.||++|++++|++++++++ +||+.|
T Consensus 140 ~i~ki~~~-~~~---~~~~~l~~~l~~~~~~~~~~~~~~~~-~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~-~GD~~N 213 (254)
T PF08282_consen 140 EIFKILFF-PDP---EDLEQLREELKKKFPNLIDVVRSSPY-FLEITPKGVSKGSAIKYLLEYLGISPEDIIA-FGDSEN 213 (254)
T ss_dssp SESEEEEE-SCH---HHHHHHHHHHHHHHTTTEEEEEEETT-EEEEEETTSSHHHHHHHHHHHHTTSGGGEEE-EESSGG
T ss_pred cceeeecc-ccc---hhhhhhhhhhccccCcceeEEEeccc-ceEEeeCCCCHHHHHHHHhhhcccccceeEE-eecccc
Confidence 45566643 222 24556666666543 33477777776 9999999999999999999999999999999 788888
Q ss_pred CCccccccCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHH
Q 001541 988 TDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSL 1049 (1057)
Q Consensus 988 ~D~~eML~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL 1049 (1057)
| ++||+.+|+||||+||. .+.+.+|+ ++|.+++++||+++|
T Consensus 214 -D-~~Ml~~~~~~~am~na~--~~~k~~a~-----------------~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 214 -D-IEMLELAGYSVAMGNAT--PELKKAAD-----------------YITPSNNDDGVAKAI 254 (254)
T ss_dssp -G-HHHHHHSSEEEEETTS---HHHHHHSS-----------------EEESSGTCTHHHHHH
T ss_pred -c-HhHHhhcCeEEEEcCCC--HHHHHhCC-----------------EEecCCCCChHHHhC
Confidence 8 99999999999999999 44445555 488999999999986
No 89
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.94 E-value=9.1e-26 Score=264.28 Aligned_cols=367 Identities=12% Similarity=0.109 Sum_probs=255.3
Q ss_pred CeEEEEccCCCcc-----cccccccCCCChhH------HHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHH
Q 001541 253 GAYIIRIPFGPKD-----KYIAKELLWPHIPE------FVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSA 321 (1057)
Q Consensus 253 gv~i~rip~~p~~-----~~l~k~~l~~~l~~------f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a 321 (1057)
++.+.+++..+.. ....+..+||.+-. |-...+....++-+.+++.+...- ..-|+|-.|......++
T Consensus 69 ~~~~~~v~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~-~~~d~vWVhDYhL~llp 147 (487)
T TIGR02398 69 KLTAARIPLSKEQVDIFYHITSKEAFWPILHTFPERFQFREDDWQVFLKVNRAFAEAACLEA-AEGATVWVHDYNLWLVP 147 (487)
T ss_pred ceeEEEEeCCHHHHHHHHhhhhhccccccccCCccccCcCHHHHHHHHHHHHHHHHHHHHhc-CCCCEEEEecchhhHHH
Confidence 4566666664421 22456778886532 222333333333344444333221 12479999988777777
Q ss_pred HHHHhc-CCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCC
Q 001541 322 ALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFD 400 (1057)
Q Consensus 322 ~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~ 400 (1057)
..+.+. .+.++-|..|..++..-- +. .....+. -...+-.||.|=..|...+..+....
T Consensus 148 ~~LR~~~~~~~IgfFlHiPFPs~ei--fr-----------~LP~r~~---ll~glL~aDliGFqt~~y~~~Fl~~~---- 207 (487)
T TIGR02398 148 GYIRQLRPDLKIAFFHHTPFPSADV--FN-----------ILPWREQ---IIGSLLCCDYIGFHIPRYVENFVDAA---- 207 (487)
T ss_pred HHHHHhCCCCeEEEEeeCCCCChHH--Hh-----------hCCchHH---HHHHHhcCCeEEeCCHHHHHHHHHHH----
Confidence 777654 357889999987664311 00 0001111 12367789999999988887765532
Q ss_pred hHHHHHHHHhH----------------------hccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCC
Q 001541 401 PVLERKLRARI----------------------KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASP 458 (1057)
Q Consensus 401 ~~~~~~l~~~~----------------------~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~ 458 (1057)
.+.|..+. .-+|...|+.. ++.++|+|||++.|.+..... .
T Consensus 208 ---~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v-~v~~~PiGID~~~f~~~~~~~-------------~ 270 (487)
T TIGR02398 208 ---RGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVV-KLGAHPVGTDPERIRSALAAA-------------S 270 (487)
T ss_pred ---HHHhCCccccccccccccccccccccccccccceeECCEEE-EEEEEECEecHHHHHHHhcCc-------------h
Confidence 22222111 11255556665 799999999999997532110 1
Q ss_pred CCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EEecC-----CCCcccchhhHHHH
Q 001541 459 DPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNR-----DGIDEMSSTSASVL 530 (1057)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~--~l~L-IvG~~-----~~~~~~~~~~~~~~ 530 (1057)
.......+++.+ .++++|+++||+++.|||..+++||+++.+.+|.. +++| ++|.. ++++++..+..+..
T Consensus 271 ~~~~~~~lr~~~--~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v 348 (487)
T TIGR02398 271 IREMMERIRSEL--AGVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAV 348 (487)
T ss_pred HHHHHHHHHHHc--CCceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCcccchHHHHHHHHHHHHH
Confidence 122233344443 37899999999999999999999999998766654 4554 44443 44556777777777
Q ss_pred HHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCC----cEEEcCCCCchhhh
Q 001541 531 LSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL----PIVATKNGGPVDIH 606 (1057)
Q Consensus 531 ~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~----PVVat~~Gg~~eiv 606 (1057)
++|+....+.++.+.++|.+.++.+++.++|+.| ||+++||++|||||+++||+||+. |+|.|..+|..+.+
T Consensus 349 ~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~A----DV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaGaa~~l 424 (487)
T TIGR02398 349 GRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMA----DVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGAAVEL 424 (487)
T ss_pred HHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhC----CEEEECccccccCcchhhHHhhhcCCCCCEEEeccccchhhc
Confidence 7788888888999999999999999999999999 999999999999999999999977 88888877776554
Q ss_pred hcCCceEEeCCCCHHHHHHHHHHHHhCHHH-HHHHHHHHHHHhhcCCHHHHHHHHHHHHHc
Q 001541 607 RVLDNGLLVDPHDQQSVADALLKLVADKQL-WARCRQNGLKNIHLFSWPEHCKTYLSRIAG 666 (1057)
Q Consensus 607 ~~~~~Gllv~p~d~~~la~aI~~ll~d~~~-~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~ 666 (1057)
..+++|||+|++++|++|.++|++|.. +++..+..++.+..++...|++.|+..+..
T Consensus 425 ---~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 425 ---KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred ---CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhhh
Confidence 469999999999999999999997664 444455555666899999999999987753
No 90
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.94 E-value=3.7e-26 Score=253.70 Aligned_cols=244 Identities=15% Similarity=0.192 Sum_probs=151.7
Q ss_pred ceEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEec
Q 001541 774 KHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 850 (1057)
Q Consensus 774 kkLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~ 850 (1057)
.|+||+||||||. +.+++.++++|++++++ |+.|+|||||++..+.++++++++. .++||+||+.|+..
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~~~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~d~ 74 (272)
T PRK10530 3 YRVIALDLDGTLLTPKKTILPESLEALARAREA----GYKVIIVTGRHHVAIHPFYQALALD----TPAICCNGTYLYDY 74 (272)
T ss_pred ccEEEEeCCCceECCCCccCHHHHHHHHHHHHC----CCEEEEEcCCChHHHHHHHHhcCCC----CCEEEcCCcEEEec
Confidence 5899999999993 57999999999999997 9999999999999999999999983 36999999999964
Q ss_pred cCCC--CCCCccccc-----------cchhh--ccccc-chhhHHHHH--HHhhhccccccccccccccccc----cccc
Q 001541 851 TLNS--EDGPFVVDF-----------YYHSH--IEYRW-GGEGLRKTL--VRWASQVTDKKAESGEKVLTPA----EQLS 908 (1057)
Q Consensus 851 ~~~~--~~~~~~~d~-----------~~~~~--i~~~w-~~e~l~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~ 908 (1057)
.... ....+..+. ..... ....| ......... ..+.......... .-..+.+. ....
T Consensus 75 ~~~~~l~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 153 (272)
T PRK10530 75 QAKKVLEADPLPVQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRP-TFTQVDSLAQAARQVN 153 (272)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhccc-ceEEcccHHHHHhhcC
Confidence 2111 000000000 00000 00000 000000000 0000000000000 00000000 0001
Q ss_pred CcceEEEEecCCCCCccHHHHHHHHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCC
Q 001541 909 TNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDT 988 (1057)
Q Consensus 909 ~~~k~~~~~~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~ 988 (1057)
..+++... .++ ....+++.+.+... ..+.+..+... ++||+|.++|||.||+++++++|++++++++ +||+.|
T Consensus 154 ~~~~i~~~--~~~-~~~~~~~~~~~~~~-~~~~~~~s~~~-~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~-~GD~~N- 226 (272)
T PRK10530 154 AIWKFALT--HED-LPQLQHFAKHVEHE-LGLECEWSWHD-QVDIARKGNSKGKRLTQWVEAQGWSMKNVVA-FGDNFN- 226 (272)
T ss_pred CcEEEEEe--cCC-HHHHHHHHHHHhhh-cCceEEEecCc-eEEEecCCCChHHHHHHHHHHcCCCHHHeEE-eCCChh-
Confidence 12232221 111 11223344444332 22445555554 8999999999999999999999999999999 899999
Q ss_pred CccccccCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHHhC
Q 001541 989 DYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 1053 (1057)
Q Consensus 989 D~~eML~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~~g 1053 (1057)
| ++||+.+|+|||||||. .+.+.. +++||+++++|||+++|+++-
T Consensus 227 D-i~m~~~ag~~vamgna~--~~lk~~-----------------Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 227 D-ISMLEAAGLGVAMGNAD--DAVKAR-----------------ADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred h-HHHHHhcCceEEecCch--HHHHHh-----------------CCEEEecCCCCcHHHHHHHHh
Confidence 9 99999999999999997 322323 336889999999999999874
No 91
>PHA01633 putative glycosyl transferase group 1
Probab=99.94 E-value=2.8e-24 Score=241.84 Aligned_cols=221 Identities=12% Similarity=0.161 Sum_probs=164.1
Q ss_pred hhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCC
Q 001541 375 LDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDN 454 (1057)
Q Consensus 375 l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~ 454 (1057)
+.+.+.+|++|+...+.+... |+ +. .+ +||+|+|++.|.|....
T Consensus 90 m~~~~~vIavS~~t~~~L~~~------------------G~-----~~-~i-~I~~GVD~~~f~p~~~~----------- 133 (335)
T PHA01633 90 LLQDVKFIPNSKFSAENLQEV------------------GL-----QV-DL-PVFHGINFKIVENAEKL----------- 133 (335)
T ss_pred HhcCCEEEeCCHHHHHHHHHh------------------CC-----CC-ce-eeeCCCChhhcCccchh-----------
Confidence 344568999999877765432 21 11 23 57899999988753210
Q ss_pred CCCCCCchHHHHHhhhC-CCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EEecCCCCcccchhhHHHH
Q 001541 455 PASPDPPIWSEIMRFFT-NPRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRDGIDEMSSTSASVL 530 (1057)
Q Consensus 455 ~~~~~~~~~~~~~~~~~-~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~--~l~L-IvG~~~~~~~~~~~~~~~~ 530 (1057)
.+ ..+.++.. .++.++|+++||+.++||++.+++|+..+.+..+.. ++.+ ++|..
T Consensus 134 ----~~---~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~-------------- 192 (335)
T PHA01633 134 ----VP---QLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK-------------- 192 (335)
T ss_pred ----hH---HHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH--------------
Confidence 00 11112221 146789999999999999999999999987544432 3455 44421
Q ss_pred HHHHHHHHHcCCCCCEEeC---CCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhh
Q 001541 531 LSVLKLIDKYDLYGQVAYP---KHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHR 607 (1057)
Q Consensus 531 ~~l~~l~~~~~l~~~V~f~---g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~ 607 (1057)
...++++.++|.|. |+++.+++.++|+.| |+||+||..||||++++||||||+|||+++.||..|++.
T Consensus 193 -----~~~~l~l~~~V~f~g~~G~~~~~dl~~~y~~a----DifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g 263 (335)
T PHA01633 193 -----QFTQLEVPANVHFVAEFGHNSREYIFAFYGAM----DFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTS 263 (335)
T ss_pred -----HHHHcCCCCcEEEEecCCCCCHHHHHHHHHhC----CEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecC
Confidence 13456777889998 566778999999999 999999999999999999999999999999999888643
Q ss_pred c------------------CCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHH
Q 001541 608 V------------------LDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLS 662 (1057)
Q Consensus 608 ~------------------~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~ 662 (1057)
. ...|+++++.|+++|+++|.+++...+ ...+++++++.++.|+|+.++++|++
T Consensus 264 ~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~-~~~~~~~~~~~a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 264 WQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD-REERSMKLKELAKKYDIRNLYTRFLE 335 (335)
T ss_pred CccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC-hhhhhHHHHHHHHhcCHHHHHHHhhC
Confidence 1 234678889999999999999966432 33347788888899999999999863
No 92
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.93 E-value=2e-25 Score=245.64 Aligned_cols=234 Identities=18% Similarity=0.110 Sum_probs=155.0
Q ss_pred EEEEEecCCCC--Cc-chHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEeccC
Q 001541 776 IFVISVDCDST--TG-LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTL 852 (1057)
Q Consensus 776 Li~~DiDGTL~--~~-i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~~~ 852 (1057)
||++|+||||. .. +.+.++++|++++++ |+.|+|||||++..+.++++++++ ++++||+||+.|++.+.
T Consensus 1 li~~DlDGTll~~~~~~~~~~~~~i~~l~~~----g~~~~~~TgR~~~~~~~~~~~~~~----~~~~I~~NGa~i~~~~~ 72 (256)
T TIGR01486 1 WIFTDLDGTLLDPHGYDWGPAKEVLERLQEL----GIPVIPCTSKTAAEVEYLRKELGL----EDPFIVENGGAIYGPRG 72 (256)
T ss_pred CEEEcCCCCCcCCCCcCchHHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCC----CCcEEEcCCeEEEeCCC
Confidence 58999999993 22 445799999999987 899999999999999999999998 36899999999998642
Q ss_pred CCCCCCccccccchhhcccccchhhHHHHHHHhhhcc-ccccccccc---------cccc---ccccccCcceEEEEecC
Q 001541 853 NSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQV-TDKKAESGE---------KVLT---PAEQLSTNYCYAFSVQK 919 (1057)
Q Consensus 853 ~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~-~~~~~~~~~---------~~~~---~~~~~~~~~k~~~~~~~ 919 (1057)
... .+..| .+...|..+.+.+++..+.... ......... .... .........++ +.. +
T Consensus 73 ~~~-----~~~~~--~~~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~ 143 (256)
T TIGR01486 73 WFT-----EPEYP--VIALGIPYEKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSET-ILW-S 143 (256)
T ss_pred ccc-----CCCeE--EEEcCCCHHHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCc-eec-C
Confidence 210 00001 1233344444444443221100 000000000 0000 00000111222 222 2
Q ss_pred CCCCccHHHHHHHHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCC--cccEEEEecCCCCCCccccccCc
Q 001541 920 PGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVE--LSKMVVFVGESGDTDYEGLLGGV 997 (1057)
Q Consensus 920 ~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~--~e~viaf~GD~~n~D~~eML~~a 997 (1057)
++ .+..+.+.+... .+.+..+ +. ++||+|+++|||.||++|++++|++ .+++++ +||+.| | ++||+.+
T Consensus 144 ~~---~~~~~~~~~~~~--~~~~~~s-~~-~~ei~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a-~GD~~N-D-~~Ml~~a 213 (256)
T TIGR01486 144 EE---RRERFTEALVEL--GLEVTHG-NR-FYHVLGAGSDKGKAANALKQFYNQPGGAIKVVG-LGDSPN-D-LPLLEVV 213 (256)
T ss_pred hH---HHHHHHHHHHHc--CCEEEeC-Cc-eEEEecCCCCHHHHHHHHHHHHhhcCCCceEEE-EcCCHh-h-HHHHHHC
Confidence 22 344566666543 3455554 33 8999999999999999999999999 999999 888888 8 9999999
Q ss_pred ceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCC---eEEccCCCChHHHHHHHHHh
Q 001541 998 HKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPN---IVQTPEDCTTSDIRSSLEQL 1052 (1057)
Q Consensus 998 g~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~---~~~vt~~~~~dgI~~aL~~~ 1052 (1057)
|+||||+||.+..+. .+.. ..+||.++++|||+++|++|
T Consensus 214 g~~vam~Na~~~~~~----------------lk~~~~a~~~vt~~~~~dGva~~l~~~ 255 (256)
T TIGR01486 214 DLAVVVPGPNGPNVS----------------LKPGDPGSFLLTPAPGPEGWREALEHL 255 (256)
T ss_pred CEEEEeCCCCCCccc----------------cCccCCCcEEEcCCCCcHHHHHHHHHh
Confidence 999999999832111 1222 24799999999999999986
No 93
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.93 E-value=3.2e-24 Score=246.55 Aligned_cols=331 Identities=17% Similarity=0.163 Sum_probs=229.7
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCccccc
Q 001541 189 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYI 268 (1057)
Q Consensus 189 d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l 268 (1057)
.+||..+++.+|+++|.+.| |+|+++|..... . .+ .....+++++++++...
T Consensus 8 ~~gG~~~~~~~la~~l~~~G--~ev~v~~~~~~~-~--------~~-------------~~~~~~~~~~~~~~~~~---- 59 (350)
T cd03785 8 GTGGHIFPALALAEELRERG--AEVLFLGTKRGL-E--------AR-------------LVPKAGIPLHTIPVGGL---- 59 (350)
T ss_pred CchhhhhHHHHHHHHHHhCC--CEEEEEECCCcc-h--------hh-------------cccccCCceEEEEecCc----
Confidence 47899999999999999999 999999875310 0 00 00113678888876432
Q ss_pred ccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHH
Q 001541 269 AKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLL 348 (1057)
Q Consensus 269 ~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~ 348 (1057)
.+...+..+..+.. ++..+..+.+.+.+ .+||+||+|...++..+.++++..++|++++.|+..+..
T Consensus 60 ~~~~~~~~~~~~~~-~~~~~~~~~~~i~~-------~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~~~----- 126 (350)
T cd03785 60 RRKGSLKKLKAPFK-LLKGVLQARKILKK-------FKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVPGL----- 126 (350)
T ss_pred CCCChHHHHHHHHH-HHHHHHHHHHHHHh-------cCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCccH-----
Confidence 11111222211111 12222222333333 579999999876677777778888999998777643210
Q ss_pred HhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEe
Q 001541 349 KQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 428 (1057)
Q Consensus 349 ~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VI 428 (1057)
.+++.++.+|.|++.|+...+. +.+ .++.+|
T Consensus 127 ---------------------~~~~~~~~~~~vi~~s~~~~~~-------~~~---------------------~~~~~i 157 (350)
T cd03785 127 ---------------------ANRLLARFADRVALSFPETAKY-------FPK---------------------DKAVVT 157 (350)
T ss_pred ---------------------HHHHHHHhhCEEEEcchhhhhc-------CCC---------------------CcEEEE
Confidence 1223566799999999876543 111 289999
Q ss_pred CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC
Q 001541 429 PPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITT-LVKAFGECRPLRELA 507 (1057)
Q Consensus 429 pnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~-Ll~A~~~l~~~~~~~ 507 (1057)
|||+|.+.+.+.. ...++..++++++|+++|+....|++.. +++|+..+.. +..
T Consensus 158 ~n~v~~~~~~~~~-----------------------~~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~--~~~ 212 (350)
T cd03785 158 GNPVREEILALDR-----------------------ERARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELLR--KRL 212 (350)
T ss_pred CCCCchHHhhhhh-----------------------hHHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhc--cCe
Confidence 9999987665321 0223334567788989888777777765 4588888752 222
Q ss_pred cEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHH
Q 001541 508 NLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEA 587 (1057)
Q Consensus 508 ~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEA 587 (1057)
.+.+++|.+ + .+++.+.++.+ .++|.|.|++ +++.++|+.| |++|.++- +++++||
T Consensus 213 ~~~~i~G~g-~-----------~~~l~~~~~~~--~~~v~~~g~~--~~~~~~l~~a----d~~v~~sg----~~t~~Ea 268 (350)
T cd03785 213 QVIHQTGKG-D-----------LEEVKKAYEEL--GVNYEVFPFI--DDMAAAYAAA----DLVISRAG----ASTVAEL 268 (350)
T ss_pred EEEEEcCCc-c-----------HHHHHHHHhcc--CCCeEEeehh--hhHHHHHHhc----CEEEECCC----HhHHHHH
Confidence 333466776 2 24455555555 4689999996 8999999999 99998762 6899999
Q ss_pred HHcCCcEEEcCCCC--------chhhhhcCCceEEeCCC--CHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHH
Q 001541 588 AAHGLPIVATKNGG--------PVDIHRVLDNGLLVDPH--DQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHC 657 (1057)
Q Consensus 588 mA~G~PVVat~~Gg--------~~eiv~~~~~Gllv~p~--d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a 657 (1057)
|++|+|||+++.++ ..+.+.+..+|+++++. |+++++++|..++.+++.++++++++++.++.+.-++++
T Consensus 269 m~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~ 348 (350)
T cd03785 269 AALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDPERLKAMAEAARSLARPDAAERIA 348 (350)
T ss_pred HHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 99999999987654 24666677899999987 899999999999999999999999999988888777665
Q ss_pred H
Q 001541 658 K 658 (1057)
Q Consensus 658 ~ 658 (1057)
+
T Consensus 349 ~ 349 (350)
T cd03785 349 D 349 (350)
T ss_pred h
Confidence 3
No 94
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.93 E-value=5.8e-24 Score=244.21 Aligned_cols=327 Identities=18% Similarity=0.181 Sum_probs=220.3
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCcccccc
Q 001541 190 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIA 269 (1057)
Q Consensus 190 ~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l~ 269 (1057)
+||......+|+++|.++| |+|+++|+... .. . ......|+++++++..+..
T Consensus 10 ~~g~~~~~~~La~~L~~~g--~eV~vv~~~~~-~~--------~-------------~~~~~~g~~~~~i~~~~~~---- 61 (348)
T TIGR01133 10 TGGHIFPALAVAEELIKRG--VEVLWLGTKRG-LE--------K-------------RLVPKAGIEFYFIPVGGLR---- 61 (348)
T ss_pred cHHHHhHHHHHHHHHHhCC--CEEEEEeCCCc-ch--------h-------------cccccCCCceEEEeccCcC----
Confidence 5566666679999999999 99999986321 00 0 0011247888888764421
Q ss_pred cccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHH
Q 001541 270 KELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLK 349 (1057)
Q Consensus 270 k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~ 349 (1057)
...+...+..+ ...+..+.++.+.+.+ .+||+||+|.......+..+++..++|+|+..|+....
T Consensus 62 ~~~~~~~l~~~-~~~~~~~~~l~~~i~~-------~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~~------- 126 (348)
T TIGR01133 62 RKGSFRLIKTP-LKLLKAVFQARRILKK-------FKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVPG------- 126 (348)
T ss_pred CCChHHHHHHH-HHHHHHHHHHHHHHHh-------cCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCcc-------
Confidence 00110011110 1112222333333333 67999999987666677777788899998655533210
Q ss_pred hhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeC
Q 001541 350 QARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIP 429 (1057)
Q Consensus 350 ~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIp 429 (1057)
. .+++.++.+|.+++.++...+.+ +..+||
T Consensus 127 --------------~-----~~~~~~~~~d~ii~~~~~~~~~~-------------------------------~~~~i~ 156 (348)
T TIGR01133 127 --------------L-----TNKLLSRFAKKVLISFPGAKDHF-------------------------------EAVLVG 156 (348)
T ss_pred --------------H-----HHHHHHHHhCeeEECchhHhhcC-------------------------------CceEEc
Confidence 0 12345778999999998654321 347999
Q ss_pred CCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCCc
Q 001541 430 PGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITT-LVKAFGECRPLRELAN 508 (1057)
Q Consensus 430 nGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~-Ll~A~~~l~~~~~~~~ 508 (1057)
||++...+.+... ..++..+++.++|+++|+....|++.. +++|+..+.. ...+
T Consensus 157 n~v~~~~~~~~~~-----------------------~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~--~~~~ 211 (348)
T TIGR01133 157 NPVRQEIRSLPVP-----------------------RERFGLREGKPTILVLGGSQGAKILNELVPKALAKLAE--KGIQ 211 (348)
T ss_pred CCcCHHHhcccch-----------------------hhhcCCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhh--cCcE
Confidence 9998765532110 012334567789999998888888765 5588888753 2334
Q ss_pred EEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHH
Q 001541 509 LTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAA 588 (1057)
Q Consensus 509 l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAm 588 (1057)
+.+++|+++ ...+.+.+.++++...+.|. . .+++++|+.| |++|.++ | +++++|||
T Consensus 212 ~~~~~g~~~------------~~~l~~~~~~~~l~~~v~~~---~-~~~~~~l~~a----d~~v~~~---g-~~~l~Ea~ 267 (348)
T TIGR01133 212 IVHQTGKND------------LEKVKNVYQELGIEAIVTFI---D-ENMAAAYAAA----DLVISRA---G-ASTVAELA 267 (348)
T ss_pred EEEECCcch------------HHHHHHHHhhCCceEEecCc---c-cCHHHHHHhC----CEEEECC---C-hhHHHHHH
Confidence 433445442 24566777777876666665 2 3899999999 9999865 2 78999999
Q ss_pred HcCCcEEEcCCCC-------chhhhhcCCceEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHH
Q 001541 589 AHGLPIVATKNGG-------PVDIHRVLDNGLLVDPHD--QQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCK 658 (1057)
Q Consensus 589 A~G~PVVat~~Gg-------~~eiv~~~~~Gllv~p~d--~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~ 658 (1057)
++|+|+|+++.++ ..+++.++.+|+++++.| +++++++|.+++++++.+++|++++++++..+.-+++++
T Consensus 268 ~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 268 AAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPANLEAMAEAARKLAKPDAAKRIAE 346 (348)
T ss_pred HcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcCCccHHHHHHh
Confidence 9999999998654 235788889999999877 999999999999999999999999998887666666554
No 95
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.93 E-value=5.5e-25 Score=242.18 Aligned_cols=227 Identities=15% Similarity=0.130 Sum_probs=150.5
Q ss_pred EEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEeccC
Q 001541 776 IFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTL 852 (1057)
Q Consensus 776 Li~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~~~ 852 (1057)
||++||||||. +.+++.++++|++++++ |+.|+|||||++..+.++++++++. .++||+||+.|++...
T Consensus 1 li~~DlDGTLl~~~~~i~~~~~~~i~~l~~~----G~~~~iaTGR~~~~~~~~~~~~~~~----~~~I~~NGa~i~~~~~ 72 (256)
T TIGR00099 1 LIFIDLDGTLLNDDHTISPSTKEALAKLREK----GIKVVLATGRPYKEVKNILKELGLD----TPFITANGAAVIDDQG 72 (256)
T ss_pred CEEEeCCCCCCCCCCccCHHHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHcCCC----CCEEEcCCcEEECCCC
Confidence 58999999993 56999999999999987 9999999999999999999999883 3799999999997632
Q ss_pred CCCCCCccccccchhhcccccchhhHHHHHHHhhhccc-----cccc-----------------ccccc-ccccc-cccc
Q 001541 853 NSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVT-----DKKA-----------------ESGEK-VLTPA-EQLS 908 (1057)
Q Consensus 853 ~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~-----~~~~-----------------~~~~~-~~~~~-~~~~ 908 (1057)
... + ......+.+.+++..+..... .... ..... .+... ....
T Consensus 73 ~~i---------~----~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (256)
T TIGR00099 73 EIL---------Y----KKPLDLDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPD 139 (256)
T ss_pred CEE---------e----ecCCCHHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhc
Confidence 110 0 000111111111111000000 0000 00000 00000 0001
Q ss_pred CcceEEEEecCCCCCccHHHHHHHHHH--hcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCC
Q 001541 909 TNYCYAFSVQKPGMTPPVKELRKVLRI--QALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESG 986 (1057)
Q Consensus 909 ~~~k~~~~~~~~~~~~~~~el~~~l~~--~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~ 986 (1057)
...+......++ ...+++.+.+.. ....+.++.+.+. ++||+|+++|||.||++|++++|++++++++ +||+.
T Consensus 140 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~s~~~-~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~-~GD~~ 214 (256)
T TIGR00099 140 DILKILLLFLDP---EDLDLLIEALNKLELEENVSVVSSGPY-SIEITAKGVSKGSALQSLAEALGISLEDVIA-FGDGM 214 (256)
T ss_pred ccceEEEEECCH---HHHHHHHHHhhhhhhcCCEEEEEecCc-eEEecCCCCChHHHHHHHHHHcCCCHHHEEE-eCCcH
Confidence 112222222111 233455555542 2345777777775 9999999999999999999999999999999 88888
Q ss_pred CCCccccccCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHH
Q 001541 987 DTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSL 1049 (1057)
Q Consensus 987 n~D~~eML~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL 1049 (1057)
| | ++||+.+|.+|||+||. .+.+..|+ +++.++++|||+++|
T Consensus 215 n-D-~~m~~~~~~~~a~~na~--~~~k~~a~-----------------~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 215 N-D-IEMLEAAGYGVAMGNAD--EELKALAD-----------------YVTDSNNEDGVALAL 256 (256)
T ss_pred H-h-HHHHHhCCceeEecCch--HHHHHhCC-----------------EEecCCCCcchhhhC
Confidence 8 8 99999999999999998 33333333 588999999999875
No 96
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.92 E-value=1.3e-23 Score=243.34 Aligned_cols=369 Identities=15% Similarity=0.152 Sum_probs=259.2
Q ss_pred CeEEEEccCCCcc-----cccccccCCCChhH------HHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHH
Q 001541 253 GAYIIRIPFGPKD-----KYIAKELLWPHIPE------FVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSA 321 (1057)
Q Consensus 253 gv~i~rip~~p~~-----~~l~k~~l~~~l~~------f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a 321 (1057)
++...+++..+.. ....+..+||.+-. |....+....+.-+.+++.+...- ..-|+|-.|......++
T Consensus 60 ~~~~~~v~L~~~~~~~yY~gfsn~~LWPlfHy~~~~~~~~~~~w~~Y~~VN~~FA~~v~~~~-~~~D~VWVHDYhL~llp 138 (474)
T PRK10117 60 NITWASFNLSEQDYDEYYNQFSNAVLWPAFHYRLDLVQFQRPAWEGYLRVNALLADKLLPLL-KDDDIIWIHDYHLLPFA 138 (474)
T ss_pred CceEEEecCCHHHHHHHHhhhhhcchhhhhCCCCCccCcCHHHHHHHHHHHHHHHHHHHHhc-CCCCEEEEeccHhhHHH
Confidence 4566666654321 22456778886532 222333333333344444333221 12489999988777777
Q ss_pred HHHHhc-CCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCC
Q 001541 322 ALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFD 400 (1057)
Q Consensus 322 ~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~ 400 (1057)
..+.+. ...++-|..|-.++..- ++. .....+. -...+-.||.|=..|......+....
T Consensus 139 ~~LR~~~~~~~IgFFlHiPFPs~e--ifr-----------~LP~r~e---il~glL~aDlIGFqt~~y~rnFl~~~---- 198 (474)
T PRK10117 139 SELRKRGVNNRIGFFLHIPFPTPE--IFN-----------ALPPHDE---LLEQLCDYDLLGFQTENDRLAFLDCL---- 198 (474)
T ss_pred HHHHHhCCCCcEEEEEeCCCCChH--HHh-----------hCCChHH---HHHHHHhCccceeCCHHHHHHHHHHH----
Confidence 777544 45789999998776431 110 0001111 12367789999999988877765532
Q ss_pred hHHHHHHHHhHh--ccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEE
Q 001541 401 PVLERKLRARIK--RNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVI 478 (1057)
Q Consensus 401 ~~~~~~l~~~~~--~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I 478 (1057)
.+.|+.... ..+...|+.. ++.++|.|||++.|...... +.......++..+ .++++|
T Consensus 199 ---~~~lg~~~~~~~~v~~~gr~v-~v~~~PigID~~~~~~~a~~--------------~~~~~~~~lr~~~--~~~~li 258 (474)
T PRK10117 199 ---SNLTRVTTRSGKSHTAWGKAF-RTEVYPIGIEPDEIAKQAAG--------------PLPPKLAQLKAEL--KNVQNI 258 (474)
T ss_pred ---HHHcCCcccCCCeEEECCeEE-EEEEEECeEcHHHHHHHhhc--------------hHHHHHHHHHHHc--CCCeEE
Confidence 222221111 1233345555 79999999999998632211 1122233444433 468899
Q ss_pred EEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEE-E-----ecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCC
Q 001541 479 LALARPDPKKNITTLVKAFGECRPLRELA--NLTLI-M-----GNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPK 550 (1057)
Q Consensus 479 l~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~--~l~LI-v-----G~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g 550 (1057)
+.++|+|+.|||...++||+++.+.+|.. +++|+ + ++.++|+++..+..+..++|+....+.++.+..++..
T Consensus 259 lgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~ 338 (474)
T PRK10117 259 FSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQ 338 (474)
T ss_pred EEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecC
Confidence 99999999999999999999998877665 45443 2 3445677888888999999999999999999888899
Q ss_pred CCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHc------CCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHH
Q 001541 551 HHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH------GLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVA 624 (1057)
Q Consensus 551 ~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~------G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la 624 (1057)
.++++++.++|+.| ||+++||+.+|||||++||+|| |+.|++..+|+..++ ..+++|||+|.+++|
T Consensus 339 ~~~~~~l~alyr~A----Dv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L----~~AllVNP~d~~~~A 410 (474)
T PRK10117 339 HFDRKLLMKIFRYS----DVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL----TSALIVNPYDRDEVA 410 (474)
T ss_pred CCCHHHHHHHHHhc----cEEEecccccccccccchheeeecCCCCccEEEecccchHHHh----CCCeEECCCCHHHHH
Confidence 99999999999999 9999999999999999999999 667888888888777 358999999999999
Q ss_pred HHHHHHHhCHHH-HHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCC
Q 001541 625 DALLKLVADKQL-WARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPR 670 (1057)
Q Consensus 625 ~aI~~ll~d~~~-~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~~~ 670 (1057)
+||.++|++|.. +++..+..++.+..++...|++.|++.+..+...
T Consensus 411 ~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~~~ 457 (474)
T PRK10117 411 AALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPR 457 (474)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhc
Confidence 999999997554 4555555556669999999999999999887543
No 97
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.92 E-value=3.7e-24 Score=229.37 Aligned_cols=211 Identities=15% Similarity=0.184 Sum_probs=146.8
Q ss_pred eEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEecc
Q 001541 775 HIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYST 851 (1057)
Q Consensus 775 kLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~~ 851 (1057)
|+|++||||||. +.+++.++++|++++++ |+.|+|||||++..+..+++.+++. .++||+||+.|++..
T Consensus 2 k~v~~DlDGTLl~~~~~i~~~~~~~i~~l~~~----g~~~~~~TGR~~~~~~~~~~~l~~~----~~~i~~NGa~i~~~~ 73 (215)
T TIGR01487 2 KLVAIDIDGTLTEPNRMISERAIEAIRKAEKK----GIPVSLVTGNTVPFARALAVLIGTS----GPVVAENGGVIFYNK 73 (215)
T ss_pred cEEEEecCCCcCCCCcccCHHHHHHHHHHHHC----CCEEEEEcCCcchhHHHHHHHhCCC----CcEEEccCcEEEeCC
Confidence 699999999993 56999999999999986 8999999999999999999999883 379999999999864
Q ss_pred CCCCCCCccccccchhhcccccchhhHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCCCCccHHHHHH
Q 001541 852 LNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRK 931 (1057)
Q Consensus 852 ~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~ 931 (1057)
.. . .+.. ....|....... ........ . ............ .. ...+.+++
T Consensus 74 ~~-----~----~~~~-~~~~~~~~~~~~--~~~~~~~~------------~--~~~~~~~~~~~~-~~---~~~~~~~~ 123 (215)
T TIGR01487 74 ED-----I----FLAN-MEEEWFLDEEKK--KRFPRDRL------------S--NEYPRASLVIMR-EG---KDVDEVRE 123 (215)
T ss_pred Cc-----E----EEec-ccchhhHHHhhh--hhhhhhhc------------c--cccceeEEEEec-CC---ccHHHHHH
Confidence 11 0 0000 000010000000 00000000 0 000011111121 11 23345666
Q ss_pred HHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCCchhhh
Q 001541 932 VLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSS 1011 (1057)
Q Consensus 932 ~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~~~~~ 1011 (1057)
.+... .+.+..+ +. ++||+|.+++||.||+++++++|++.+++++ +||+.| | ++||+.+|+||||+||. .+
T Consensus 124 ~l~~~--~~~~~~~-~~-~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~-iGDs~N-D-~~ml~~ag~~vam~na~--~~ 194 (215)
T TIGR01487 124 IIKER--GLNLVDS-GF-AIHIMKKGVDKGVGVEKLKELLGIKPEEVAA-IGDSEN-D-IDLFRVVGFKVAVANAD--DQ 194 (215)
T ss_pred HHHhC--CeEEEec-Cc-eEEEecCCCChHHHHHHHHHHhCCCHHHEEE-ECCCHH-H-HHHHHhCCCeEEcCCcc--HH
Confidence 66543 3454444 43 8999999999999999999999999999999 899999 9 99999999999999998 33
Q ss_pred hhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHH
Q 001541 1012 NQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSL 1049 (1057)
Q Consensus 1012 ~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL 1049 (1057)
.+..|+ +||.+++++||+++|
T Consensus 195 ~k~~A~-----------------~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 195 LKEIAD-----------------YVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHhCC-----------------EEcCCCCCchhhhhC
Confidence 333343 698999999999875
No 98
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.91 E-value=2.8e-23 Score=230.78 Aligned_cols=248 Identities=16% Similarity=0.147 Sum_probs=154.4
Q ss_pred cceEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEe
Q 001541 773 RKHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYY 849 (1057)
Q Consensus 773 ~kkLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~ 849 (1057)
..|+||+||||||. +.+++.++++|++++++ |+.|+|||||++..+..+++.+++. +++||.||+.||+
T Consensus 3 ~~kli~~DlDGTLl~~~~~~~~~~~~ai~~l~~~----Gi~~~iaTgR~~~~~~~~~~~l~l~----~~~i~~nGa~i~~ 74 (273)
T PRK00192 3 MKLLVFTDLDGTLLDHHTYSYEPAKPALKALKEK----GIPVIPCTSKTAAEVEVLRKELGLE----DPFIVENGAAIYI 74 (273)
T ss_pred cceEEEEcCcccCcCCCCcCcHHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCCC----CCEEEEcCcEEEe
Confidence 37899999999994 46788999999999986 9999999999999999999999983 4799999999997
Q ss_pred ccCCCC---CCCccccccchhhcccccchhhHHHHHHHhhhc-c--ccccccc---c----cccccc--cccccCcceEE
Q 001541 850 STLNSE---DGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQ-V--TDKKAES---G----EKVLTP--AEQLSTNYCYA 914 (1057)
Q Consensus 850 ~~~~~~---~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~-~--~~~~~~~---~----~~~~~~--~~~~~~~~k~~ 914 (1057)
.+.... ......+..| ........+.+.+++..+... . ....... . .....+ ........+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (273)
T PRK00192 75 PKNYFPFQPDGERLKGDYW--VIELGPPYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEP 152 (273)
T ss_pred cccccccCCccccccCCce--EEEcCCCHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCc
Confidence 542100 0000000001 111112233333333221110 0 0000000 0 000000 00001111111
Q ss_pred EEecCCCCCccHHHHHHHHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCc-ccEEEEecCCCCCCcccc
Q 001541 915 FSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVEL-SKMVVFVGESGDTDYEGL 993 (1057)
Q Consensus 915 ~~~~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~-e~viaf~GD~~n~D~~eM 993 (1057)
+.... . ....+.+.+.+...+ +.++.+ + .++||+|.+ |||.||++|++++|+++ +++++ +||+.| | ++|
T Consensus 153 ~~~~~-~-~~~~~~~~~~l~~~~--~~~~~~-~-~~~ei~~~~-~Kg~al~~l~~~~~i~~~~~v~~-~GDs~N-D-i~m 222 (273)
T PRK00192 153 FLWNG-S-EAAKERFEEALKRLG--LKVTRG-G-RFLHLLGGG-DKGKAVRWLKELYRRQDGVETIA-LGDSPN-D-LPM 222 (273)
T ss_pred eeecC-c-hHHHHHHHHHHHHcC--CEEEEC-C-eEEEEeCCC-CHHHHHHHHHHHHhccCCceEEE-EcCChh-h-HHH
Confidence 22111 1 123455666665433 444443 4 489999999 99999999999999999 99999 888888 8 999
Q ss_pred ccCcceEEEeCCCchhhhhh-hhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHH-hC
Q 001541 994 LGGVHKTVILKGICSSSSNQ-IHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQ-LG 1053 (1057)
Q Consensus 994 L~~ag~gVAMgNa~~~~~~~-~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~-~g 1053 (1057)
|+.+|++|||+||.+..... ..+++ ...++|.++.+|||+.+|++ ||
T Consensus 223 ~~~ag~~vam~NA~~~~k~~~~~~a~-------------~~v~~~~~~~~~Gv~~~l~~~~~ 271 (273)
T PRK00192 223 LEAADIAVVVPGPDGPNPPLLPGIAD-------------GEFILASAPGPEGWAEAINKLLS 271 (273)
T ss_pred HHhCCeeEEeCCCCCCCcccCccccC-------------CceEEecCCCcHHHHHHHHHHHh
Confidence 99999999999999332100 11110 23445588999999999997 44
No 99
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=99.90 E-value=3.6e-21 Score=232.65 Aligned_cols=528 Identities=14% Similarity=0.089 Sum_probs=345.0
Q ss_pred ceEEEEcCCCchHHHHHHHhc-CCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecC
Q 001541 307 PVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITST 385 (1057)
Q Consensus 307 pDvIh~h~~~~~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S 385 (1057)
-|+|-.|......+...+... ..+++-+..|+..+.... .......+.| -..+..++.+-..+
T Consensus 141 ~d~vwihdyhlmllp~~lr~~~~~~~ig~flhspfpssEi-------------~r~lp~r~eI---l~gll~~~~i~f~t 204 (732)
T KOG1050|consen 141 GDIVWIHDYHLMLLPQMLRERFNSAKIGFFLHSPFPSSEI-------------YRCLPVRKEI---LRGLLYDDLLGFHT 204 (732)
T ss_pred CCcEEEEcchhhccchhhhcccccceEEEeccCCCChHHH-------------HHhcccHHHH---HHhhhccCcccccc
Confidence 566666654333333344433 356666788877553211 0000011111 23567778777666
Q ss_pred HHHHHHHHhhhCCCChHHHHHHHHhHh-----ccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCC
Q 001541 386 RQEIEEQWRLYDGFDPVLERKLRARIK-----RNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDP 460 (1057)
Q Consensus 386 ~~~~~~~~~~y~~~~~~~~~~l~~~~~-----~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~ 460 (1057)
.+....+. ..+-|.|..... -||+-.|+.. .+..+|.|+|..+|.... ..+
T Consensus 205 ~d~arhFl-------s~c~R~l~~~~~s~~~~~~v~~rgr~~-~v~~~pigid~~r~v~~~----------------~~~ 260 (732)
T KOG1050|consen 205 DDYARHFL-------STCSRLLGLEVASKFPTAGVSGRGRDV-SVKALPIGIDVQRFVKLL----------------ELP 260 (732)
T ss_pred ccHHHHHH-------HHHHHHHHhhhhccCCcceEEecccee-eeeecccccchHHhhccc----------------cch
Confidence 65444332 233444444444 3566666665 788999999999987432 122
Q ss_pred chHHHHHhhhCC-CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EE-----ecCCCCcccchhhHHHHH
Q 001541 461 PIWSEIMRFFTN-PRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IM-----GNRDGIDEMSSTSASVLL 531 (1057)
Q Consensus 461 ~~~~~~~~~~~~-~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~--~l~L-Iv-----G~~~~~~~~~~~~~~~~~ 531 (1057)
...+..+.+... .++++|+.++|+++.||+..-+.||+++....+.. ++.+ .+ +.+.++++++......+.
T Consensus 261 ~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~ 340 (732)
T KOG1050|consen 261 YVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVR 340 (732)
T ss_pred hHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhhh
Confidence 222222222222 47899999999999999999999999998765544 3433 22 233334456666666777
Q ss_pred HHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHc--C--CcEEEcCCCCchhhhh
Q 001541 532 SVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH--G--LPIVATKNGGPVDIHR 607 (1057)
Q Consensus 532 ~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~--G--~PVVat~~Gg~~eiv~ 607 (1057)
++++........+.+.+...++..++.++|..| |++++.++.+|++++++|+.+| + .+.|.+..-|..+..+
T Consensus 341 rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Va----ev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~ 416 (732)
T KOG1050|consen 341 RINEKFGSASYQPVHSLLKDLPFLELLALYKVA----EVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLE 416 (732)
T ss_pred hhhhccCCcccceEEEeeccCCHHHHhhhHHhh----hheeecccccccchhhhHHHHhhcccCCceEEeeecccccccc
Confidence 788777777766667788999999999999999 9999999999999999999999 2 5555555444445533
Q ss_pred cCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH-HHhhcCCHHHHHHHHHHHHHcccCCCC-CCCCCCCCCCCCC
Q 001541 608 VLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGL-KNIHLFSWPEHCKTYLSRIAGCKPRHP-QWQRNDDGGETSE 685 (1057)
Q Consensus 608 ~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~-~~v~~fsw~~~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~~ 685 (1057)
...++++|+|.++++.+|..++.+++...+++..-. +.+..++...|++.++..+.++-.... ..+..+
T Consensus 417 --d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~~l~~~~~~~~~~~~~~~------- 487 (732)
T KOG1050|consen 417 --DAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQGLKRIWKVGFLGFRVTP------- 487 (732)
T ss_pred --ccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHHhhhhhhhhccccccccc-------
Confidence 467899999999999999999997776555554433 333577888888888884443322211 011100
Q ss_pred CCCCCCccchhhhhccccccccCCCCCCCCCCCCCCcccCchhhhhhHHHHHHHHhhccccccccCCCCCCccccCCCCC
Q 001541 686 SDSPGDSLRDIQDISLNLKFSLDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAA 765 (1057)
Q Consensus 686 ~~s~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 765 (1057)
--....+++.|+
T Consensus 488 ---------------------------------------------~l~~~~~i~~y~----------------------- 499 (732)
T KOG1050|consen 488 ---------------------------------------------LLTAEHIVSDYK----------------------- 499 (732)
T ss_pred ---------------------------------------------ccChhHhhhhhh-----------------------
Confidence 001234666777
Q ss_pred cCCcccCcceEEEEEecCCCCCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHh-CCCCCCCCCeEEeCCC
Q 001541 766 KFPALRRRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVS-GHLSPSDFDAFICNSG 844 (1057)
Q Consensus 766 ~~~~~~~~kkLi~~DiDGTL~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~-lgl~~~~~D~lI~~nG 844 (1057)
++.+|+|++|+|+|+....+..+...|+.|... ++..+.|++||....+..++.. .++ +++++||
T Consensus 500 -----~s~~rli~ldyd~t~~~~~~~~~~~~l~~L~~d---p~n~v~i~s~~~r~~l~~~~~~~~~l------gl~aEhG 565 (732)
T KOG1050|consen 500 -----KSKKRLILLDYDLTLIPPRSIKAISILKDLCSD---PKNIVYIVSGRGRSVLEKWFFGCKNL------GLAAEHG 565 (732)
T ss_pred -----hccceEEEecccccccCCCCchHHHHHHHHhcC---CCCeEEEEEccCchhhhhhccccccc------eeecccC
Confidence 678999999999999644444478888888887 7788889999999998776632 233 7899999
Q ss_pred cEEEeccCCCCCCCccccccchhhcccccchhhHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCCCC-
Q 001541 845 SDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMT- 923 (1057)
Q Consensus 845 a~I~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~- 923 (1057)
.++..++.|.... .+.+|.... .+..+.+.++++++..+.+ ...+.|++++.+..
T Consensus 566 ~f~r~~~~w~~~~---~~~~w~~~v-----~~i~~~~~ert~GS~ie~k----------------~~~l~~hy~~ad~~~ 621 (732)
T KOG1050|consen 566 YFVRIPGKWETCV---LDLDWKDLV-----KDIFQYYTERTPGSYIERK----------------ETALVWHYRNADPEF 621 (732)
T ss_pred ceeccCCceeeec---ccccHHHHH-----HHHHHHHHhcCCCceeccc----------------CceEEEeeeccCcch
Confidence 9999876332111 222332222 2345666777888777665 34566777655322
Q ss_pred --ccHHHHHHHHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcc
Q 001541 924 --PPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVH 998 (1057)
Q Consensus 924 --~~~~el~~~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag 998 (1057)
....++.+.|......+++..-. ..+||-|.|+|||.|...+...+.-+++.+++ .||.. || ++|+....
T Consensus 622 g~~qA~el~~~l~~~~~~~~v~~g~--~~Vev~~~gvsk~~~~~~~~~~~~~~~df~~c-~g~d~-tD-ed~~~~~~ 693 (732)
T KOG1050|consen 622 GELQAKELLEHLESKNEPVEVVRGK--HIVEVRPQGVSKGLAAERILSEMVKEPDFVLC-IGDDR-TD-EDMFEFIS 693 (732)
T ss_pred hHHHHHHHHHHhcccCCCeEEEecC--ceEEEcccccchHHHHHHHHHhcCCCcceEEE-ecCCC-Ch-HHHHHHHh
Confidence 23456666665523334444333 38999999999999999999999833344555 78844 48 99998753
No 100
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.89 E-value=2.2e-21 Score=229.52 Aligned_cols=283 Identities=16% Similarity=0.203 Sum_probs=192.2
Q ss_pred CcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEec
Q 001541 305 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 384 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~ 384 (1057)
.+||+||++...........++..++|++++-|.+...... .|+...+ .++..++.+|.|++.
T Consensus 123 ~~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~~s~~---------------~~~~~~~--~~r~~~~~~d~ii~~ 185 (425)
T PRK05749 123 WRPKLVIIMETELWPNLIAELKRRGIPLVLANARLSERSFK---------------RYQKFKR--FYRLLFKNIDLVLAQ 185 (425)
T ss_pred hCCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCChhhHH---------------HHHHHHH--HHHHHHHhCCEEEEC
Confidence 56999999854332333334567799999887755322211 1111122 244578899999999
Q ss_pred CHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHH
Q 001541 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 464 (1057)
Q Consensus 385 S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1057)
|+...+.+.. +|.+.+ +.++||+ +++.+.+.. ......
T Consensus 186 S~~~~~~l~~-----------------------~g~~~~-i~vi~n~-~~d~~~~~~-----------------~~~~~~ 223 (425)
T PRK05749 186 SEEDAERFLA-----------------------LGAKNE-VTVTGNL-KFDIEVPPE-----------------LAARAA 223 (425)
T ss_pred CHHHHHHHHH-----------------------cCCCCC-cEecccc-cccCCCChh-----------------hHHHHH
Confidence 9987776433 232333 7788884 443332110 001111
Q ss_pred HHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCC
Q 001541 465 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 543 (1057)
Q Consensus 465 ~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~ 543 (1057)
..+..+. +++++|+++|+. .|+.+.+++|+..+... .+++.| |+|.+++. ..++.+++.++++.
T Consensus 224 ~~r~~~~-~~~~vil~~~~~--~~~~~~ll~A~~~l~~~--~~~~~liivG~g~~r----------~~~l~~~~~~~gl~ 288 (425)
T PRK05749 224 TLRRQLA-PNRPVWIAASTH--EGEEELVLDAHRALLKQ--FPNLLLILVPRHPER----------FKEVEELLKKAGLS 288 (425)
T ss_pred HHHHHhc-CCCcEEEEeCCC--chHHHHHHHHHHHHHHh--CCCcEEEEcCCChhh----------HHHHHHHHHhCCCc
Confidence 2222222 567889998874 68899999999998643 456664 67877641 25677888888875
Q ss_pred CCEEeCCCCC------------CCcHHHHHHHhhcCCcEEEE-cCCCCCCCHHHHHHHHcCCcEEEcCC-CCchhhhhcC
Q 001541 544 GQVAYPKHHK------------QSDVPEIYRLAAKTKGVFIN-PAFIEPFGLTLIEAAAHGLPIVATKN-GGPVDIHRVL 609 (1057)
Q Consensus 544 ~~V~f~g~v~------------~~dl~~ly~~Aa~~~dv~v~-ps~~Egfgl~~lEAmA~G~PVVat~~-Gg~~eiv~~~ 609 (1057)
.+.|.+... ..+++.+|+.| |++++ +|+.|++|++++||||||+|||+++. ++..++++..
T Consensus 289 -~~~~~~~~~~~~~~~v~l~~~~~el~~~y~~a----Di~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~ 363 (425)
T PRK05749 289 -YVRRSQGEPPSADTDVLLGDTMGELGLLYAIA----DIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERL 363 (425)
T ss_pred -EEEccCCCCCCCCCcEEEEecHHHHHHHHHhC----CEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHH
Confidence 244444211 35899999999 99655 67889999999999999999999874 6666665542
Q ss_pred -CceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHccc
Q 001541 610 -DNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCK 668 (1057)
Q Consensus 610 -~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~ 668 (1057)
.+|+++.|.|+++++++|.++++|++.+++|++++++.+... ....+++++.|....
T Consensus 364 ~~~g~~~~~~d~~~La~~l~~ll~~~~~~~~m~~~a~~~~~~~--~~~~~~~~~~l~~~l 421 (425)
T PRK05749 364 LQAGAAIQVEDAEDLAKAVTYLLTDPDARQAYGEAGVAFLKQN--QGALQRTLQLLEPYL 421 (425)
T ss_pred HHCCCeEEECCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHhc
Confidence 468888899999999999999999999999999999999533 255666777666543
No 101
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.88 E-value=7.3e-21 Score=221.66 Aligned_cols=263 Identities=13% Similarity=0.079 Sum_probs=182.3
Q ss_pred CcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEec
Q 001541 305 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 384 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~ 384 (1057)
.+||+||++++.........+...++|++.+.++..... .+.++.+|.+++.
T Consensus 103 ~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~~----------------------------~~~~~~ad~i~~~ 154 (380)
T PRK13609 103 EKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLHK----------------------------IWVHREVDRYFVA 154 (380)
T ss_pred hCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCCc----------------------------ccccCCCCEEEEC
Confidence 679999999875554444445567899887666543211 1357789999999
Q ss_pred CHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHH
Q 001541 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 464 (1057)
Q Consensus 385 S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1057)
|+...+.+.+ +|.+..++.+++++++.. |.+.. ....
T Consensus 155 s~~~~~~l~~-----------------------~gi~~~ki~v~G~p~~~~-f~~~~-------------------~~~~ 191 (380)
T PRK13609 155 TDHVKKVLVD-----------------------IGVPPEQVVETGIPIRSS-FELKI-------------------NPDI 191 (380)
T ss_pred CHHHHHHHHH-----------------------cCCChhHEEEECcccChH-HcCcC-------------------CHHH
Confidence 9886665432 122334788876665432 32110 0112
Q ss_pred HHHhhhCCCCCcEE-EEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCC
Q 001541 465 EIMRFFTNPRKPVI-LALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDL 542 (1057)
Q Consensus 465 ~~~~~~~~~~~~~I-l~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l 542 (1057)
.+.++...++++++ ++.|++...||+..+++++.+. +++.+ ++|++. ..+...+.+++..++
T Consensus 192 ~~~~~~l~~~~~~il~~~G~~~~~k~~~~li~~l~~~------~~~~~viv~G~~---------~~~~~~l~~~~~~~~- 255 (380)
T PRK13609 192 IYNKYQLCPNKKILLIMAGAHGVLGNVKELCQSLMSV------PDLQVVVVCGKN---------EALKQSLEDLQETNP- 255 (380)
T ss_pred HHHHcCCCCCCcEEEEEcCCCCCCcCHHHHHHHHhhC------CCcEEEEEeCCC---------HHHHHHHHHHHhcCC-
Confidence 33445555566654 5568888899999999988643 23443 343322 112455666666554
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcC-CCCch----hhhhcCCceEEeCC
Q 001541 543 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK-NGGPV----DIHRVLDNGLLVDP 617 (1057)
Q Consensus 543 ~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~-~Gg~~----eiv~~~~~Gllv~p 617 (1057)
.+|.|+|++ ++++++|+.| |++|. ++.|++++||||||+|||+++ .+|.. +.+. .+|+.+.+
T Consensus 256 -~~v~~~g~~--~~~~~l~~~a----D~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~--~~G~~~~~ 322 (380)
T PRK13609 256 -DALKVFGYV--ENIDELFRVT----SCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFE--RKGAAVVI 322 (380)
T ss_pred -CcEEEEech--hhHHHHHHhc----cEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHH--hCCcEEEE
Confidence 579999996 5799999999 99874 567999999999999999986 55531 2333 24555556
Q ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcc
Q 001541 618 HDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGC 667 (1057)
Q Consensus 618 ~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~ 667 (1057)
.|+++++++|.+++++++.+++|++++++....++++.+++.+++.+..+
T Consensus 323 ~~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 323 RDDEEVFAKTEALLQDDMKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred CCHHHHHHHHHHHHCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 79999999999999999999999999988878899999999999888644
No 102
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.88 E-value=5.1e-21 Score=220.53 Aligned_cols=353 Identities=14% Similarity=0.144 Sum_probs=250.7
Q ss_pred cccccCCCChhHH------HHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhcC-CCCEEEEecCCc
Q 001541 268 IAKELLWPHIPEF------VDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGAL-NVPMLFTGHSLG 340 (1057)
Q Consensus 268 l~k~~l~~~l~~f------~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~~-~iP~V~t~H~l~ 340 (1057)
..+..|||-+-.+ .........++-+.+.+.+...- ..=|+|-.|.....++...+.... ..++.|..|-.+
T Consensus 104 fsn~iLWP~~Hy~~~~~~~~~~~w~~Y~~vN~~FAd~i~~~~-~~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPf 182 (486)
T COG0380 104 FSNAILWPLFHYFIDDVAYERNWWDAYVKVNRKFADKIVEIY-EPGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPF 182 (486)
T ss_pred hhHhhhcceeeeecCccccchHHHHHHHHHHHHHHHHHHHhc-CCCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCC
Confidence 3456677755332 23333333444444444333211 113899999876667776666544 467888999877
Q ss_pred hhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccC-
Q 001541 341 RDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYG- 419 (1057)
Q Consensus 341 ~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g- 419 (1057)
+..- ++ . ...+...| ...+-.||.|-..+...+..+.... .+.+......++..-|
T Consensus 183 PssE--vf----------r-~lP~r~eI---l~gll~~dligFqt~~y~~nF~~~~-------~r~~~~~~~~~~~~~~~ 239 (486)
T COG0380 183 PSSE--VF----------R-CLPWREEI---LEGLLGADLIGFQTESYARNFLDLC-------SRLLGVTGDADIRFNGA 239 (486)
T ss_pred CCHH--HH----------h-hCchHHHH---HHHhhcCCeeEecCHHHHHHHHHHH-------HHhcccccccccccccc
Confidence 6431 11 1 11111111 2367789999999988877665543 3333311122233221
Q ss_pred -CCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHH
Q 001541 420 -KFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFG 498 (1057)
Q Consensus 420 -~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~ 498 (1057)
....++..+|.|||+..|...... +.....+.++.+.+.. ++++|+.++|+|+.||+...+.||+
T Consensus 240 ~~~~v~v~a~PIgID~~~~~~~~~~-------------~~v~~~~~el~~~~~~-~~kiivgvDRlDy~kGi~~rl~Afe 305 (486)
T COG0380 240 DGRIVKVGAFPIGIDPEEFERALKS-------------PSVQEKVLELKAELGR-NKKLIVGVDRLDYSKGIPQRLLAFE 305 (486)
T ss_pred CCceEEEEEEeeecCHHHHHHhhcC-------------CchhhHHHHHHHHhcC-CceEEEEehhcccccCcHHHHHHHH
Confidence 233488999999999998743321 1222456667776643 3899999999999999999999999
Q ss_pred hcccccCCC--cEEEEE------ecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcE
Q 001541 499 ECRPLRELA--NLTLIM------GNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGV 570 (1057)
Q Consensus 499 ~l~~~~~~~--~l~LIv------G~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv 570 (1057)
+|+..+|.. +++++. ++.+.++.+..+..+.+++|+....+.++.+.++|...++.+++.++|+.| |+
T Consensus 306 ~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~a----Dv 381 (486)
T COG0380 306 RLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAA----DV 381 (486)
T ss_pred HHHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhh----ce
Confidence 998766655 444422 333344457778888999999999999999988999999999999999999 99
Q ss_pred EEEcCCCCCCCHHHHHHHHc-----CCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHH-HHHH
Q 001541 571 FINPAFIEPFGLTLIEAAAH-----GLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARC-RQNG 644 (1057)
Q Consensus 571 ~v~ps~~Egfgl~~lEAmA~-----G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~-~~~~ 644 (1057)
++++|+.|||+||+.|+.|| |..|++..+|+..++ ..+++|||+|.+++|++|.++|+++.+.++. -+..
T Consensus 382 ~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L----~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~ 457 (486)
T COG0380 382 MLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASEL----RDALIVNPWDTKEVADAIKRALTMSLEERKERHEKL 457 (486)
T ss_pred eeeccccccccHHHHHHHHhhcCCCCcEEEeccccchhhh----ccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 99999999999999999999 888888889998888 3599999999999999999999966554444 4444
Q ss_pred HHHhhcCCHHHHHHHHHHHHHc
Q 001541 645 LKNIHLFSWPEHCKTYLSRIAG 666 (1057)
Q Consensus 645 ~~~v~~fsw~~~a~~~l~~~~~ 666 (1057)
++.+..++...|+.+|+..+..
T Consensus 458 ~~~v~~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 458 LKQVLTHDVARWANSFLDDLAQ 479 (486)
T ss_pred HHHHHhhhHHHHHHHHHHHHHh
Confidence 5556899999999999999886
No 103
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=99.87 E-value=1.5e-21 Score=215.18 Aligned_cols=195 Identities=10% Similarity=0.055 Sum_probs=133.2
Q ss_pred cceEEEEEecCCCC--------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCC
Q 001541 773 RKHIFVISVDCDST--------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSG 844 (1057)
Q Consensus 773 ~kkLi~~DiDGTL~--------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nG 844 (1057)
.+.+|++|+||||. +.+++.++++|++|++. .|+.|+|+|||++..+.++++.+++ .+||+||
T Consensus 13 ~~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~---~g~~v~i~SGR~~~~~~~~~~~~~~------~~i~~nG 83 (266)
T PRK10187 13 ANYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATA---NDGALALISGRSMVELDALAKPYRF------PLAGVHG 83 (266)
T ss_pred CCEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhC---CCCcEEEEeCCCHHHHHHhcCcccc------eEEEeCC
Confidence 36899999999994 26889999999999984 4899999999999999999987765 4899999
Q ss_pred cEEEeccCCCCCCCccccccchhhcccccchhh---HHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCC
Q 001541 845 SDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEG---LRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPG 921 (1057)
Q Consensus 845 a~I~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 921 (1057)
++|+..+.. . +...+...|.... +++.+.+.++...+.+ ...++++++...
T Consensus 84 a~i~~~~~~-----~-----~~~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k----------------~~~~~~h~r~~~ 137 (266)
T PRK10187 84 AERRDINGK-----T-----HIVHLPDAIARDISVQLHTALAQLPGAELEAK----------------GMAFALHYRQAP 137 (266)
T ss_pred CeeecCCCC-----e-----eeccCChhHHHHHHHHHHHHhccCCCcEEEeC----------------CcEEEEECCCCC
Confidence 999865311 0 1111222221111 1111222223333222 234445554332
Q ss_pred C-CccHHHHHHHHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCc---
Q 001541 922 M-TPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGV--- 997 (1057)
Q Consensus 922 ~-~~~~~el~~~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~a--- 997 (1057)
. ...+.++.+.+......+ .+.+.+ .++||+|+++|||.||++|++++|++.+++++ +||+.| | ++||+.+
T Consensus 138 ~~~~~~~~l~~~i~~~~~~~-~~~~g~-~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~-~GD~~n-D-~~mf~~~~~~ 212 (266)
T PRK10187 138 QHEDALLALAQRITQIWPQL-ALQPGK-CVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF-VGDDLT-D-EAGFAVVNRL 212 (266)
T ss_pred ccHHHHHHHHHHHHhhCCce-EEeCCC-EEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE-EcCCcc-H-HHHHHHHHhc
Confidence 1 122333333333332222 233444 59999999999999999999999999999888 788877 8 9999999
Q ss_pred -ceEEEeCCCc
Q 001541 998 -HKTVILKGIC 1007 (1057)
Q Consensus 998 -g~gVAMgNa~ 1007 (1057)
|.||+|||+.
T Consensus 213 ~g~~vavg~a~ 223 (266)
T PRK10187 213 GGISVKVGTGA 223 (266)
T ss_pred CCeEEEECCCC
Confidence 9999999998
No 104
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.87 E-value=1.1e-21 Score=230.57 Aligned_cols=369 Identities=15% Similarity=0.146 Sum_probs=220.4
Q ss_pred CCeEEEEccCCCc--c---cccccccCCCChh----------HHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC
Q 001541 252 SGAYIIRIPFGPK--D---KYIAKELLWPHIP----------EFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYAD 316 (1057)
Q Consensus 252 ~gv~i~rip~~p~--~---~~l~k~~l~~~l~----------~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~ 316 (1057)
++..++.++..+. + ....+..+||.+. .|.........++-+.+++.+...- ..-|+|-.|...
T Consensus 73 ~~~~~~pV~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~-~~~D~VWVhDYh 151 (474)
T PF00982_consen 73 DEYNCVPVFLSPEEYDGYYNGFCNQVLWPLFHYRLDSRPDLARFEEEWWEAYKRVNRRFADAIAEVY-RPGDLVWVHDYH 151 (474)
T ss_dssp TTEEEEEEEE-HHHHHHHTTTHHHHTHHHHHTT-GG----G----HHHHHHHHHHHHHHHHHHGGG---TT-EEEEESGG
T ss_pred cCceEEEEEcCHHHHHHHHHhhhhhccCcccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhC-cCCCEEEEeCCc
Confidence 4566666665321 0 2244667777333 2333334444444444444443321 236899999886
Q ss_pred chHHHHHHHhc-CCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhh
Q 001541 317 AGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRL 395 (1057)
Q Consensus 317 ~~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~ 395 (1057)
...++.++.++ .+.++.+..|..++..-. +. .++ .... -...+-.||.|-..|...+..+...
T Consensus 152 L~llP~~LR~~~~~~~IgfFlHiPFPs~e~--fr--~lP---------~r~e---iL~glL~aDlIgFqt~~~~~nFl~~ 215 (474)
T PF00982_consen 152 LMLLPQMLRERGPDARIGFFLHIPFPSSEI--FR--CLP---------WREE---ILRGLLGADLIGFQTFEYARNFLSC 215 (474)
T ss_dssp GTTHHHHHHHTT--SEEEEEE-S----HHH--HT--TST---------THHH---HHHHHTTSSEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCceEeeEEecCCCCHHH--Hh--hCC---------cHHH---HHHHhhcCCEEEEecHHHHHHHHHH
Confidence 66777777654 468889999987663310 00 001 1111 1236789999999999887776543
Q ss_pred hCCCChHHHHHHHHhHh--c-cccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCC
Q 001541 396 YDGFDPVLERKLRARIK--R-NVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTN 472 (1057)
Q Consensus 396 y~~~~~~~~~~l~~~~~--~-gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (1057)
+.+.|+.... + +|...|+.. ++.++|.|||++.|...... .........++..+.
T Consensus 216 -------~~r~lg~~~~~~~~~v~~~Gr~v-~v~~~pigId~~~~~~~~~~-------------~~v~~~~~~l~~~~~- 273 (474)
T PF00982_consen 216 -------CKRLLGLEVDSDRGTVEYNGRRV-RVGVFPIGIDPDAFAQLARS-------------PEVQERAEELREKFK- 273 (474)
T ss_dssp -------HHHHS-EEEEETTE-EEETTEEE-EEEE------HHHHHHHHH--------------S---HHHHHHHHHTT-
T ss_pred -------HHHHcCCcccCCCceEEECCEEE-EEEEeeccCChHHHHhhccC-------------hHHHHHHHHHHHhcC-
Confidence 2333332222 2 355556555 89999999999988632111 123334455555542
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEE--E-ec---CCCCcccchhhHHHHHHHHHHHHHcCCCC
Q 001541 473 PRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTLI--M-GN---RDGIDEMSSTSASVLLSVLKLIDKYDLYG 544 (1057)
Q Consensus 473 ~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~--~l~LI--v-G~---~~~~~~~~~~~~~~~~~l~~l~~~~~l~~ 544 (1057)
.+.++|+.++|+|+.||+...++||+++.+.+|.. +++|+ + .. .++++++..+..+..++|+....+.++.+
T Consensus 274 ~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~P 353 (474)
T PF00982_consen 274 GKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTP 353 (474)
T ss_dssp T-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-S
T ss_pred CCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCcee
Confidence 23589999999999999999999999998776654 45542 2 22 33355678888889999999999999999
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHc-----CCcEEEcCCCCchhhhhcCCceEEeCCCC
Q 001541 545 QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH-----GLPIVATKNGGPVDIHRVLDNGLLVDPHD 619 (1057)
Q Consensus 545 ~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~-----G~PVVat~~Gg~~eiv~~~~~Gllv~p~d 619 (1057)
.+++.+.++++++.++|+.| ||+++||+.+||+|+.+|++|| |+.|++..+|+..++ . +.+++|||+|
T Consensus 354 I~~~~~~~~~~~~~aly~~a----Dv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L-~--~~al~VNP~d 426 (474)
T PF00982_consen 354 IIYIYRSLSFEELLALYRAA----DVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQL-S--EAALLVNPWD 426 (474)
T ss_dssp EEEE-S---HHHHHHHHHH-----SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT--T--TS-EEE-TT-
T ss_pred EEEEecCCCHHHHHHHHHhh----hhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHHHHc-C--CccEEECCCC
Confidence 88999999999999999999 9999999999999999999999 667788888887666 1 2359999999
Q ss_pred HHHHHHHHHHHHhCHHH-HHHHHHHHHHHhhcCCHHHHHHHHHHHHHc
Q 001541 620 QQSVADALLKLVADKQL-WARCRQNGLKNIHLFSWPEHCKTYLSRIAG 666 (1057)
Q Consensus 620 ~~~la~aI~~ll~d~~~-~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~ 666 (1057)
++++|+||.++|+++.. ++...+..++.+..++...|++.+++.+++
T Consensus 427 ~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 427 IEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDLKR 474 (474)
T ss_dssp HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhhC
Confidence 99999999999997664 444455556667999999999999998763
No 105
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.86 E-value=9.2e-20 Score=211.91 Aligned_cols=265 Identities=18% Similarity=0.140 Sum_probs=178.9
Q ss_pred CcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEec
Q 001541 305 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 384 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~ 384 (1057)
....|++.+.+.+..++.. ..+.++|+..|+.+.... +. .. ... ..|+.+++.||.|+++
T Consensus 101 ~~~~i~~~~~P~~~~~~~~---~~~~~~Vyd~~D~~~~~~------~~-~~--------~~~--~~e~~~~~~ad~vi~~ 160 (373)
T cd04950 101 FGRPILWYYTPYTLPVAAL---LQASLVVYDCVDDLSAFP------GG-PP--------ELL--EAERRLLKRADLVFTT 160 (373)
T ss_pred CCCcEEEEeCccHHHHHhh---cCCCeEEEEcccchhccC------CC-CH--------HHH--HHHHHHHHhCCEEEEC
Confidence 4466777766655444333 567899999998754321 10 11 001 3477889999999999
Q ss_pred CHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHH
Q 001541 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 464 (1057)
Q Consensus 385 S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1057)
|+...+.+... . +++.+||||+|.+.|.+..... ..
T Consensus 161 S~~l~~~~~~~-~-------------------------~~i~~i~ngvd~~~f~~~~~~~--------------~~---- 196 (373)
T cd04950 161 SPSLYEAKRRL-N-------------------------PNVVLVPNGVDYEHFAAARDPP--------------PP---- 196 (373)
T ss_pred CHHHHHHHhhC-C-------------------------CCEEEcccccCHHHhhcccccC--------------CC----
Confidence 99866543221 1 2899999999999987542110 00
Q ss_pred HHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHcCCC
Q 001541 465 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 543 (1057)
Q Consensus 465 ~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~ 543 (1057)
.+.....++++|+|+|++.+.++++.+.++.... +++. +++|.++..... ..+...
T Consensus 197 --~~~~~~~~~~~i~y~G~l~~~~d~~ll~~la~~~------p~~~~vliG~~~~~~~~---------------~~~~~~ 253 (373)
T cd04950 197 --PADLAALPRPVIGYYGAIAEWLDLELLEALAKAR------PDWSFVLIGPVDVSIDP---------------SALLRL 253 (373)
T ss_pred --hhHHhcCCCCEEEEEeccccccCHHHHHHHHHHC------CCCEEEEECCCcCccCh---------------hHhccC
Confidence 0011235688999999999988887666555432 3444 477876321110 111124
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCC-----CCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCC
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFI-----EPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPH 618 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~-----Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~ 618 (1057)
++|+|+|+++.++++.+|+.| |++++|+.. +++|++++||||||+|||+|+.++..+ ....+++ .+.
T Consensus 254 ~nV~~~G~~~~~~l~~~l~~~----Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~~---~~~~~~~-~~~ 325 (373)
T cd04950 254 PNVHYLGPKPYKELPAYLAGF----DVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVRR---YEDEVVL-IAD 325 (373)
T ss_pred CCEEEeCCCCHHHHHHHHHhC----CEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHHh---hcCcEEE-eCC
Confidence 789999999999999999999 999999753 468999999999999999998755443 3333444 467
Q ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHc
Q 001541 619 DQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAG 666 (1057)
Q Consensus 619 d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~ 666 (1057)
|+++++++|.+++.++...... ...+.++.|||+..+++++..+.+
T Consensus 326 d~~~~~~ai~~~l~~~~~~~~~--~~~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 326 DPEEFVAAIEKALLEDGPARER--RRLRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred CHHHHHHHHHHHHhcCCchHHH--HHHHHHHHCCHHHHHHHHHHHHHh
Confidence 9999999999987643221111 122245899999999999977654
No 106
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.86 E-value=1.4e-20 Score=223.04 Aligned_cols=256 Identities=13% Similarity=0.153 Sum_probs=165.5
Q ss_pred CCCCCcCCcccCcceEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCC
Q 001541 761 NTGAAKFPALRRRKHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFD 837 (1057)
Q Consensus 761 ~~~~~~~~~~~~~kkLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D 837 (1057)
+..++..|.....+|+||+|+||||. +.+++.++++|++++++ |+.|+|||||++..+..+++++++. +
T Consensus 403 ~~~~~~~~~~~~~~KLIfsDLDGTLLd~d~~i~~~t~eAL~~L~ek----GI~~VIATGRs~~~i~~l~~~Lgl~----~ 474 (694)
T PRK14502 403 AARPSRLPSSGQFKKIVYTDLDGTLLNPLTYSYSTALDALRLLKDK----ELPLVFCSAKTMGEQDLYRNELGIK----D 474 (694)
T ss_pred hhhcccCCCcCceeeEEEEECcCCCcCCCCccCHHHHHHHHHHHHc----CCeEEEEeCCCHHHHHHHHHHcCCC----C
Confidence 34556667667788999999999994 34677899999999987 9999999999999999999999983 6
Q ss_pred eEEeCCCcEEEeccCCCCCCCccccccc--hhhcccccchhhHHHHHHHhhhccc---c-----ccc--cccccc-c---
Q 001541 838 AFICNSGSDLYYSTLNSEDGPFVVDFYY--HSHIEYRWGGEGLRKTLVRWASQVT---D-----KKA--ESGEKV-L--- 901 (1057)
Q Consensus 838 ~lI~~nGa~I~~~~~~~~~~~~~~d~~~--~~~i~~~w~~e~l~~~~~~~~~~~~---~-----~~~--~~~~~~-~--- 901 (1057)
++||+||+.|+.+..... .....+... .......+..+.+++.+..+..... . ... ...... .
T Consensus 475 ~~I~eNGA~I~~~~~~~~-~~~~~~~~~~~~iI~~~~l~~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei 553 (694)
T PRK14502 475 PFITENGGAIFIPKDYFR-LPFAYDRVAGNYLVIELGMAYKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDV 553 (694)
T ss_pred eEEEcCCCEEEECCCccc-ccccccccCCCeEEEEcCCCHHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHH
Confidence 799999999998753110 000000000 0011223344444444433222100 0 000 000000 0
Q ss_pred -----cc------cccccCcceEEEEecCCCCCccHHHHHHHHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHH
Q 001541 902 -----TP------AEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLR 970 (1057)
Q Consensus 902 -----~~------~~~~~~~~k~~~~~~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~ 970 (1057)
+. ........|+.+. .++ ..++++.+.+... .+++.. +.+++||+ .++|||+||++|+++
T Consensus 554 ~~~TgL~~~~a~~a~~Re~seKIl~~-gd~---e~Leel~~~L~~~--~l~v~~--g~rfleI~-~gvdKG~AL~~L~e~ 624 (694)
T PRK14502 554 SRLTDLNLKQAELAKQREYSETVHIE-GDK---RSTNIVLNHIQQS--GLEYSF--GGRFYEVT-GGNDKGKAIKILNEL 624 (694)
T ss_pred HHhhCCCHHHHHHHhhccCceeEEEc-CCH---HHHHHHHHHHHHc--CcEEEE--CCEEEEeC-CCCCHHHHHHHHHHH
Confidence 00 0001122344443 222 3466777777765 344443 44599999 599999999999999
Q ss_pred hCCCcccEEEE-ecCCCCCCccccccCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHH
Q 001541 971 WGVELSKMVVF-VGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSL 1049 (1057)
Q Consensus 971 lgI~~e~viaf-~GD~~n~D~~eML~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL 1049 (1057)
+|++.+++++| +||+.| | ++||+.+|+||||++-...-..+ ..++.. .|......|-..|+
T Consensus 625 ~gI~~~eViafalGDs~N-D-isMLe~Ag~gVAM~~~~~~~~~l---------------~~~~~~-~~~~~GP~GW~eai 686 (694)
T PRK14502 625 FRLNFGNIHTFGLGDSEN-D-YSMLETVDSPILVQRPGNKWHKM---------------RLRNPS-YVKGVGPEGFSRAV 686 (694)
T ss_pred hCCCccceEEEEcCCcHh-h-HHHHHhCCceEEEcCCCCCCCcc---------------CCCCce-ecCCCCcHHHHHHH
Confidence 99999999994 299999 9 99999999999998776222111 123444 55888999988888
Q ss_pred HHh
Q 001541 1050 EQL 1052 (1057)
Q Consensus 1050 ~~~ 1052 (1057)
.++
T Consensus 687 ~~~ 689 (694)
T PRK14502 687 TDI 689 (694)
T ss_pred HHH
Confidence 775
No 107
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.85 E-value=9.8e-21 Score=203.75 Aligned_cols=205 Identities=15% Similarity=0.109 Sum_probs=128.4
Q ss_pred EEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEeccC
Q 001541 776 IFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTL 852 (1057)
Q Consensus 776 Li~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~~~ 852 (1057)
+|++||||||. +.+++.++++|++++++ |+.|+|||||++..+..+++.+++. ..++||+||+.|+....
T Consensus 1 ~i~~DlDGTLL~~~~~~~~~~~~~l~~l~~~----gi~~~i~TgR~~~~~~~~~~~l~~~---~~~~I~~NGa~i~~~~~ 73 (221)
T TIGR02463 1 WVFSDLDGTLLDSHSYDWQPAAPWLTRLQEA----GIPVILCTSKTAAEVEYLQKALGLT---GDPYIAENGAAIHLEEL 73 (221)
T ss_pred CEEEeCCCCCcCCCCCCcHHHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCCC---CCcEEEeCCcEEEcCcc
Confidence 58999999994 22555699999999886 9999999999999999999999983 14799999999997532
Q ss_pred CCCCCCccccccchhhcccccchhhHHHHHHHhhhc---cccccccc-----c--ccccccc--ccccCcceEEEEe-cC
Q 001541 853 NSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQ---VTDKKAES-----G--EKVLTPA--EQLSTNYCYAFSV-QK 919 (1057)
Q Consensus 853 ~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~---~~~~~~~~-----~--~~~~~~~--~~~~~~~k~~~~~-~~ 919 (1057)
+... ..|.. .......+.+.+.+..+... ........ . ....... .......+..+.. .+
T Consensus 74 ~~~~------~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (221)
T TIGR02463 74 WREE------PGYPR-IILGISYGIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDS 146 (221)
T ss_pred cccC------CCceE-EecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCc
Confidence 1100 00000 01111112222222111000 00000000 0 0000000 0001112222332 11
Q ss_pred CCCCccHHHHHHHHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcce
Q 001541 920 PGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHK 999 (1057)
Q Consensus 920 ~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~ 999 (1057)
....+++++.+...+ +.+..+ +. ++||+|.+++||.|+++|++++||+++++++ +||+.| | ++||+.+|.
T Consensus 147 ---~~~~~~~~~~l~~~~--~~~~~~-~~-~~ei~~~~~~Kg~al~~l~~~lgi~~~~vi~-~GD~~N-D-i~ml~~ag~ 216 (221)
T TIGR02463 147 ---DSRMPRFTALLADLG--LAIVQG-NR-FSHVLGASSSKGKAANWLKATYNQPDVKTLG-LGDGPN-D-LPLLEVADY 216 (221)
T ss_pred ---hhHHHHHHHHHHHcC--CeEEec-CC-eeEEecCCCCHHHHHHHHHHHhCCCCCcEEE-ECCCHH-H-HHHHHhCCc
Confidence 224456666665533 444443 44 8999999999999999999999999999999 899999 9 999999999
Q ss_pred EEEeC
Q 001541 1000 TVILK 1004 (1057)
Q Consensus 1000 gVAMg 1004 (1057)
|||+.
T Consensus 217 ~va~~ 221 (221)
T TIGR02463 217 AVVIK 221 (221)
T ss_pred eEEeC
Confidence 99973
No 108
>PTZ00174 phosphomannomutase; Provisional
Probab=99.85 E-value=1.2e-20 Score=206.38 Aligned_cols=207 Identities=14% Similarity=0.093 Sum_probs=125.3
Q ss_pred CcceEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEE
Q 001541 772 RRKHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLY 848 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~ 848 (1057)
...|||++||||||. +.+++.++++|++++++ |+.|+|||||++..+.+.++..... ..+++||+||+.|+
T Consensus 3 ~~~klia~DlDGTLL~~~~~is~~~~~ai~~l~~~----Gi~~viaTGR~~~~i~~~l~~~~~~--~~~~~I~~NGa~I~ 76 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKPRNPITQEMKDTLAKLKSK----GFKIGVVGGSDYPKIKEQLGEDVLE--DFDYVFSENGLVAY 76 (247)
T ss_pred CCCeEEEEECcCCCcCCCCCCCHHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHhhhhhc--ccCeEEeCCceEEE
Confidence 457999999999993 67999999999999997 9999999999999998888754321 13578999999999
Q ss_pred eccCCCCCCCccccccchhhcccccchhhHHHHHHHhhh----cccccccccccccccccccccCcceEEEEecC-----
Q 001541 849 YSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWAS----QVTDKKAESGEKVLTPAEQLSTNYCYAFSVQK----- 919 (1057)
Q Consensus 849 ~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~----- 919 (1057)
..+ ... +...+......+.+.+++..... ...... ...+...... .....+....
T Consensus 77 ~~~------~~i----~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~~~ 140 (247)
T PTZ00174 77 KDG------ELF----HSQSILKFLGEEKLKKFINFCLRYIADLDIPVK----RGTFIEYRNG--MINISPIGRNCSQEE 140 (247)
T ss_pred ECC------eEE----EEEcchhcCCHHHHHHHHHHHHHHHHhcCCccc----eeeeEEcCCc--eEEeccccccCCHHH
Confidence 642 111 11111111112222322221110 000000 0001000000 0000000000
Q ss_pred -------CCCCccHHHHHHHHHHhcCcEEEEEeeC-CeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecC----CCC
Q 001541 920 -------PGMTPPVKELRKVLRIQALRCHVIYCQN-GSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGE----SGD 987 (1057)
Q Consensus 920 -------~~~~~~~~el~~~l~~~~~~~~v~~s~~-~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD----~~n 987 (1057)
........++.+.+......+.+.++.+ ..++||+|+++|||.||++|+++ ++++|| ||| +.|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~----~~evia-fGD~~~~~~N 215 (247)
T PTZ00174 141 RDEFEKYDKEHHIREKFIQDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND----FKEIHF-FGDKTFEGGN 215 (247)
T ss_pred HHHHHhcCCcchHHHHHHHHHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh----hhhEEE-EcccCCCCCC
Confidence 0001123456666654434455666654 24899999999999999999999 589999 788 788
Q ss_pred CCccccccCc-ceEEEeCCCc
Q 001541 988 TDYEGLLGGV-HKTVILKGIC 1007 (1057)
Q Consensus 988 ~D~~eML~~a-g~gVAMgNa~ 1007 (1057)
| ++||+.+ -.|+.++||.
T Consensus 216 -D-ieMl~~~~~~g~~v~n~~ 234 (247)
T PTZ00174 216 -D-YEIYNDPRTIGHSVKNPE 234 (247)
T ss_pred -c-HhhhhcCCCceEEeCCHH
Confidence 8 9999954 2445555887
No 109
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.85 E-value=3e-19 Score=208.25 Aligned_cols=265 Identities=12% Similarity=0.063 Sum_probs=187.0
Q ss_pred CcceEEEEcCCC-chHHHHHHHh-----cCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcC
Q 001541 305 VWPVAIHGHYAD-AGDSAALLSG-----ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDAS 378 (1057)
Q Consensus 305 ~~pDvIh~h~~~-~~~~a~~l~~-----~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~a 378 (1057)
.+||+||++++. ....+..++. ..++|++.+.+++.... ..+..+.+
T Consensus 99 ~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~---------------------------~~w~~~~~ 151 (382)
T PLN02605 99 YKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH---------------------------PTWFHKGV 151 (382)
T ss_pred cCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC---------------------------cccccCCC
Confidence 579999997643 2222222222 35899998888763111 01347789
Q ss_pred CEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCC
Q 001541 379 EIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASP 458 (1057)
Q Consensus 379 d~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~ 458 (1057)
|.++++|+...+.+.. +|.+.+++.+++++++.+.+.+.
T Consensus 152 d~~~~~s~~~~~~l~~-----------------------~g~~~~ki~v~g~~v~~~f~~~~------------------ 190 (382)
T PLN02605 152 TRCFCPSEEVAKRALK-----------------------RGLEPSQIRVYGLPIRPSFARAV------------------ 190 (382)
T ss_pred CEEEECCHHHHHHHHH-----------------------cCCCHHHEEEECcccCHhhccCC------------------
Confidence 9999999887665433 22333489999999986543321
Q ss_pred CCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc----cCCCcEEEEEecCCCCcccchhhHHHHHHHH
Q 001541 459 DPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPL----RELANLTLIMGNRDGIDEMSSTSASVLLSVL 534 (1057)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~----~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~ 534 (1057)
......+.++..++++++|+++||....|++..+++++..+... .+...+.+++|+++. +..++.
T Consensus 191 -~~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~----------~~~~L~ 259 (382)
T PLN02605 191 -RPKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK----------LQSKLE 259 (382)
T ss_pred -CCHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH----------HHHHHH
Confidence 11123345566677899999999999999999999999865311 122233356665421 123333
Q ss_pred HHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCC------CCchhhhhc
Q 001541 535 KLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN------GGPVDIHRV 608 (1057)
Q Consensus 535 ~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~------Gg~~eiv~~ 608 (1057)
++ ....+|.|+|++ ++++++|++| |++|.++ .|++++||||||+|||+++. |+...+ .+
T Consensus 260 ~~----~~~~~v~~~G~~--~~~~~l~~aa----Dv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i-~~ 324 (382)
T PLN02605 260 SR----DWKIPVKVRGFV--TNMEEWMGAC----DCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNVPYV-VD 324 (382)
T ss_pred hh----cccCCeEEEecc--ccHHHHHHhC----CEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhHHHH-Hh
Confidence 32 223569999997 5899999999 9999865 48899999999999999983 455444 44
Q ss_pred CCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 001541 609 LDNGLLVDPHDQQSVADALLKLVAD-KQLWARCRQNGLKNIHLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 609 ~~~Gllv~p~d~~~la~aI~~ll~d-~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~ 665 (1057)
.+.|+++ .|+++++++|.+++.+ ++.+++|++++++..+..+++.+++.+.+...
T Consensus 325 ~g~g~~~--~~~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~~~ 380 (382)
T PLN02605 325 NGFGAFS--ESPKEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIVHDLHELVR 380 (382)
T ss_pred CCceeec--CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHhh
Confidence 5567655 6999999999999998 99999999999999988999999888776653
No 110
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.85 E-value=4.3e-19 Score=207.41 Aligned_cols=268 Identities=12% Similarity=0.095 Sum_probs=182.4
Q ss_pred CcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEec
Q 001541 305 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 384 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~ 384 (1057)
.+||+||++.+.........++.+++|++...++..... .+..+.+|.+++.
T Consensus 103 ~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~~----------------------------~w~~~~~d~~~v~ 154 (391)
T PRK13608 103 EKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLHK----------------------------NWITPYSTRYYVA 154 (391)
T ss_pred hCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCccc----------------------------ccccCCCCEEEEC
Confidence 679999998764433222333456899865554431100 1246789999999
Q ss_pred CHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHH
Q 001541 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 464 (1057)
Q Consensus 385 S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1057)
|+...+.+... +. +..++.|++++++.. |.... ....
T Consensus 155 s~~~~~~l~~~--gi---------------------~~~ki~v~GiPv~~~-f~~~~-------------------~~~~ 191 (391)
T PRK13608 155 TKETKQDFIDV--GI---------------------DPSTVKVTGIPIDNK-FETPI-------------------DQKQ 191 (391)
T ss_pred CHHHHHHHHHc--CC---------------------CHHHEEEECeecChH-hcccc-------------------cHHH
Confidence 98876665331 22 223888888777633 32110 0112
Q ss_pred HHHhhhCCCCCcE-EEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCC
Q 001541 465 EIMRFFTNPRKPV-ILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 543 (1057)
Q Consensus 465 ~~~~~~~~~~~~~-Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~ 543 (1057)
.+.++..++++++ +++.|++...||+..+++++.+. .+...+.+++|+.+ ....++.+ .++..
T Consensus 192 ~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~~~~---~~~~~~vvv~G~~~----------~l~~~l~~---~~~~~ 255 (391)
T PRK13608 192 WLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDILAK---SANAQVVMICGKSK----------ELKRSLTA---KFKSN 255 (391)
T ss_pred HHHHcCCCCCCCEEEEECCCcccchhHHHHHHHHHhc---CCCceEEEEcCCCH----------HHHHHHHH---HhccC
Confidence 2334455556665 45789999999999999986432 22223333445331 11233333 33445
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcC-CCC----chhhhhcCCceEEeCCC
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK-NGG----PVDIHRVLDNGLLVDPH 618 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~-~Gg----~~eiv~~~~~Gllv~p~ 618 (1057)
++|.|.|++ ++++++|+.| |++|. .+.|+++.||||+|+|+|+++ .+| ...++.+.+.|+++ .
T Consensus 256 ~~v~~~G~~--~~~~~~~~~a----Dl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~--~ 323 (391)
T PRK13608 256 ENVLILGYT--KHMNEWMASS----QLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIA--D 323 (391)
T ss_pred CCeEEEecc--chHHHHHHhh----hEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEe--C
Confidence 689999995 6899999999 99986 357999999999999999996 443 12233455556654 4
Q ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCCC
Q 001541 619 DQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRH 671 (1057)
Q Consensus 619 d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~~~~ 671 (1057)
|.++++++|.+++++++.+++|++++++..+.|+++.+++.+++++....+.+
T Consensus 324 ~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~~ 376 (391)
T PRK13608 324 TPEEAIKIVASLTNGNEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQPQ 376 (391)
T ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhhh
Confidence 99999999999999999999999999999889999999999999998665544
No 111
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.84 E-value=1.4e-20 Score=193.62 Aligned_cols=162 Identities=31% Similarity=0.511 Sum_probs=142.6
Q ss_pred hCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEe
Q 001541 470 FTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY 548 (1057)
Q Consensus 470 ~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f 548 (1057)
....++++|+++||+++.||++.+++|+..+.+. ..+++.+ |+|+++. ...+..++..+++..++.|
T Consensus 10 ~~~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~-~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~i~~ 77 (172)
T PF00534_consen 10 KIPDKKKIILFIGRLDPEKGIDLLIEAFKKLKEK-KNPNYKLVIVGDGEY-----------KKELKNLIEKLNLKENIIF 77 (172)
T ss_dssp TT-TTSEEEEEESESSGGGTHHHHHHHHHHHHHH-HHTTEEEEEESHCCH-----------HHHHHHHHHHTTCGTTEEE
T ss_pred CCCCCCeEEEEEecCccccCHHHHHHHHHHHHhh-cCCCeEEEEEccccc-----------ccccccccccccccccccc
Confidence 3457789999999999999999999999998642 2345554 7785542 5668888999999999999
Q ss_pred CCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHH
Q 001541 549 PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALL 628 (1057)
Q Consensus 549 ~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~ 628 (1057)
++.++.+++..+|+.| |++|+||..|+||++++|||+||+|||+++.|+..|++.++.+|+++++.|+++++++|.
T Consensus 78 ~~~~~~~~l~~~~~~~----di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~ 153 (172)
T PF00534_consen 78 LGYVPDDELDELYKSS----DIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIE 153 (172)
T ss_dssp EESHSHHHHHHHHHHT----SEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHH
T ss_pred cccccccccccccccc----eeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHH
Confidence 9999888999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCHHHHHHHHHHHHHH
Q 001541 629 KLVADKQLWARCRQNGLKN 647 (1057)
Q Consensus 629 ~ll~d~~~~~~~~~~~~~~ 647 (1057)
+++.+++.++.|+++++++
T Consensus 154 ~~l~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 154 KLLNDPELRQKLGKNARER 172 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCHHHHHHHHHHhcCC
Confidence 9999999999999999875
No 112
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.83 E-value=7.8e-20 Score=194.21 Aligned_cols=193 Identities=16% Similarity=0.222 Sum_probs=129.7
Q ss_pred EEEEEecCCCC----CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEecc
Q 001541 776 IFVISVDCDST----TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYST 851 (1057)
Q Consensus 776 Li~~DiDGTL~----~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~~ 851 (1057)
||++|+||||+ ..+++.++++|++|+++ |+.|+|+|||++..+.++++.++ +++||+||+.|++.+
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~l~~~----g~~~~i~TGR~~~~~~~~~~~~~------~~~i~~nGa~i~~~~ 70 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALERLREA----GVKVVLVTGRSLAEIKELLKQLP------LPLIAENGALIFYPG 70 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHhCC------CCEEECCCcEEEECC
Confidence 58999999994 45889999999999987 79999999999999999998843 469999999999753
Q ss_pred CCCCCCCccccccchhhcccccchhhHHHHHH---HhhhcccccccccccccccccccccCcceEEEEecCCCC-CccHH
Q 001541 852 LNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLV---RWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGM-TPPVK 927 (1057)
Q Consensus 852 ~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~ 927 (1057)
.. .|.. ..+.....+. +......... .............+++|++.+... .....
T Consensus 71 ~~----------~~~~------~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 129 (204)
T TIGR01484 71 EI----------LYIE------PSDVFEEILGIKEEIGAELKSLS-----EHYVGTFIEDKAIAVAIHYVGAELGQELDS 129 (204)
T ss_pred EE----------EEEc------ccccHHHHHHhhhhcCceeeeec-----cccccceeecccceeeEEEeccchhhHHHH
Confidence 11 1110 0011111110 1000000000 000000011234556666543211 11123
Q ss_pred HHHHHHHHhc---CcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEe
Q 001541 928 ELRKVLRIQA---LRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 1003 (1057)
Q Consensus 928 el~~~l~~~~---~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAM 1003 (1057)
++...+.... ..++++++++. ++||+|++++|+.|++++++++|++++++++ +||+.| | ++||+.+|.+|||
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~s~~~-~~ev~p~~~~K~~~~~~~~~~~~~~~~~~~~-~GD~~n-D-~~~~~~~~~~vam 204 (204)
T TIGR01484 130 KMRERLEKIGRNDLELEAIYVGKT-DLEVLPAGVDKGSALQALLKELNGKRDEILA-FGDSGN-D-EEMFEVAGLAVAV 204 (204)
T ss_pred HHHHHHHhhccccCcEEEEEecCC-EEEEecCCCChHHHHHHHHHHhCCCHHHEEE-EcCCHH-H-HHHHHHcCCceEC
Confidence 4444444332 34677766775 9999999999999999999999999999988 888888 8 9999999999998
No 113
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.82 E-value=2e-17 Score=176.87 Aligned_cols=390 Identities=18% Similarity=0.260 Sum_probs=261.2
Q ss_pred CCCcHHHHHHHHHHHHhcC-CCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCcccc
Q 001541 189 DTGGQVKYVVELARALGSM-PGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKY 267 (1057)
Q Consensus 189 d~GG~~~~v~~LA~aLa~~-Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~ 267 (1057)
..||-+++.+--.+.+.+. +. +...++|..++ +. |.+.|.. -...|.- -..++++.++.+.. ++
T Consensus 55 AGGGGErVLW~Avr~~q~k~~n-~~~viYsGD~n---~t-----~~~IL~k-~k~~F~i-dlDs~nI~Fi~Lk~----R~ 119 (465)
T KOG1387|consen 55 AGGGGERVLWKAVRITQRKFPN-NVIVIYSGDFN---VT-----PENILNK-VKNKFDI-DLDSDNIFFIYLKL----RY 119 (465)
T ss_pred CCCCcceehhHHHHHHHHhCCC-ceEEEEeCCCC---CC-----HHHHHHH-HHHhcCc-eecccceEEEEEEe----ee
Confidence 3578888888778877664 42 45555655532 11 1111111 0111111 12345677776654 56
Q ss_pred cccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcC--CCchHHHHHHHhcCCCCEEEEecCCch--hh
Q 001541 268 IAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHY--ADAGDSAALLSGALNVPMLFTGHSLGR--DK 343 (1057)
Q Consensus 268 l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~--~~~~~~a~~l~~~~~iP~V~t~H~l~~--~~ 343 (1057)
+....-|++..-+-+.+-..+..+ .++.+ ..|||.+-.. +.+-.+ +++..++|++..+|-.-- +-
T Consensus 120 lVea~~~~hfTllgQaigsmIl~~-Eai~r-------~~Pdi~IDtMGY~fs~p~---~r~l~~~~V~aYvHYP~iS~DM 188 (465)
T KOG1387|consen 120 LVEASTWKHFTLLGQAIGSMILAF-EAIIR-------FPPDIFIDTMGYPFSYPI---FRRLRRIPVVAYVHYPTISTDM 188 (465)
T ss_pred eeecccccceehHHHHHHHHHHHH-HHHHh-------CCchheEecCCCcchhHH---HHHHccCceEEEEecccccHHH
Confidence 666777888754444433333322 22222 5699888653 322222 233558999999996422 22
Q ss_pred HHHHHH---hhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCC
Q 001541 344 LEQLLK---QARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGK 420 (1057)
Q Consensus 344 ~~~l~~---~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~ 420 (1057)
+..+.. .|.+.+. .-..|+++.++ -.++-..||.|++.|.........+.+.+
T Consensus 189 L~~l~qrq~s~~l~~~-KlaY~rlFa~l--Y~~~G~~ad~vm~NssWT~nHI~qiW~~~--------------------- 244 (465)
T KOG1387|consen 189 LKKLFQRQKSGILVWG-KLAYWRLFALL--YQSAGSKADIVMTNSSWTNNHIKQIWQSN--------------------- 244 (465)
T ss_pred HHHHHhhhhcchhhhH-HHHHHHHHHHH--HHhccccceEEEecchhhHHHHHHHhhcc---------------------
Confidence 222221 1211111 11233444443 45677899999998765444443333321
Q ss_pred CCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhc
Q 001541 421 FMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGEC 500 (1057)
Q Consensus 421 ~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l 500 (1057)
.+.+++|+.+.+........ ...+.+.+|++|.+.|.||.. +|+.+...
T Consensus 245 ---~~~iVyPPC~~e~lks~~~t---------------------------e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~ 293 (465)
T KOG1387|consen 245 ---TCSIVYPPCSTEDLKSKFGT---------------------------EGERENQLLSLAQFRPEKNHK-ILQLFALY 293 (465)
T ss_pred ---ceeEEcCCCCHHHHHHHhcc---------------------------cCCcceEEEEEeecCcccccH-HHHHHHHH
Confidence 56788888887754321100 024568899999999999999 55555554
Q ss_pred ccccCC----CcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcC
Q 001541 501 RPLREL----ANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPA 575 (1057)
Q Consensus 501 ~~~~~~----~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps 575 (1057)
..+.++ +++.| ++|+... ++..+.+..++.++..+++.++|.|...+|.+++..+|..| .+-|++-
T Consensus 294 ~~~~pl~a~~~~iKL~ivGScRn-----eeD~ervk~Lkd~a~~L~i~~~v~F~~N~Py~~lv~lL~~a----~iGvh~M 364 (465)
T KOG1387|consen 294 LKNEPLEASVSPIKLIIVGSCRN-----EEDEERVKSLKDLAEELKIPKHVQFEKNVPYEKLVELLGKA----TIGVHTM 364 (465)
T ss_pred HhcCchhhccCCceEEEEeccCC-----hhhHHHHHHHHHHHHhcCCccceEEEecCCHHHHHHHhccc----eeehhhh
Confidence 444444 45555 6776543 23456789999999999999999999999999999999999 8999999
Q ss_pred CCCCCCHHHHHHHHcCCcEEEcCCCCch-hhhhc---CCceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHhhc
Q 001541 576 FIEPFGLTLIEAAAHGLPIVATKNGGPV-DIHRV---LDNGLLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNIHL 650 (1057)
Q Consensus 576 ~~Egfgl~~lEAmA~G~PVVat~~Gg~~-eiv~~---~~~Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v~~ 650 (1057)
+.|-||+.+.||||+|+-.|+.+.||+. |||.+ ..+|++.. +.++.|++|++++. +++++..+++++|+.+.+
T Consensus 365 wNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~--t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~R 442 (465)
T KOG1387|consen 365 WNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP--TDEEYAEAILKIVKLNYDERNMMRRNARKSLAR 442 (465)
T ss_pred hhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC--ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999875 77754 24789885 88899999999998 788899999999999999
Q ss_pred CCHHHHHHHHHHHHHcccCC
Q 001541 651 FSWPEHCKTYLSRIAGCKPR 670 (1057)
Q Consensus 651 fsw~~~a~~~l~~~~~~~~~ 670 (1057)
|+-....+.|...+..+++.
T Consensus 443 FsE~~F~kd~~~~i~kll~e 462 (465)
T KOG1387|consen 443 FGELKFDKDWENPICKLLEE 462 (465)
T ss_pred hhHHHHHHhHhHHHHHhhcc
Confidence 99999999999999887654
No 114
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.79 E-value=1e-18 Score=188.01 Aligned_cols=209 Identities=12% Similarity=0.012 Sum_probs=125.6
Q ss_pred EEEEEecCCCC--CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEeccCC
Q 001541 776 IFVISVDCDST--TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTLN 853 (1057)
Q Consensus 776 Li~~DiDGTL~--~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~~~~ 853 (1057)
+||+||||||. ..+++.++++|++++++ |+.|++||||+...+..+++++++. +++||+||+.|+.+...
T Consensus 1 li~~DlDGTLl~~~~~~~~~~~ai~~l~~~----G~~~vi~TgR~~~~~~~~~~~lg~~----~~~I~~NGa~I~~~~~~ 72 (225)
T TIGR02461 1 VIFTDLDGTLLPPGYEPGPAREALEELKDL----GFPIVFVSSKTRAEQEYYREELGVE----PPFIVENGGAIFIPRGY 72 (225)
T ss_pred CEEEeCCCCCcCCCCCchHHHHHHHHHHHC----CCEEEEEeCCCHHHHHHHHHHcCCC----CcEEEcCCcEEEecCcc
Confidence 58999999993 45667899999999987 9999999999999999999999983 57999999999986421
Q ss_pred CCCCCccccc-cchhhcccccchhhHHHHHHHhhh-ccccccccccc-------cc---ccccccccCcceEEEEecCCC
Q 001541 854 SEDGPFVVDF-YYHSHIEYRWGGEGLRKTLVRWAS-QVTDKKAESGE-------KV---LTPAEQLSTNYCYAFSVQKPG 921 (1057)
Q Consensus 854 ~~~~~~~~d~-~~~~~i~~~w~~e~l~~~~~~~~~-~~~~~~~~~~~-------~~---~~~~~~~~~~~k~~~~~~~~~ 921 (1057)
........+. .-...+...+..+.+++++..... ........... .. ...........++.+. .++
T Consensus 73 ~~~~~~~~~~~~~~~i~~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~-~~~- 150 (225)
T TIGR02461 73 FPFPVGAGREVGNYEVIELGKPVAKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETIFL-WSR- 150 (225)
T ss_pred ccccccccccCCCeEEEEcCCCHHHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcccC-CCH-
Confidence 0000000000 000011222333333333322211 00000000000 00 0000000111222222 112
Q ss_pred CCccHHHHHHHHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCC--CcccEEEEecCCCCCCccccccCcce
Q 001541 922 MTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGV--ELSKMVVFVGESGDTDYEGLLGGVHK 999 (1057)
Q Consensus 922 ~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI--~~e~viaf~GD~~n~D~~eML~~ag~ 999 (1057)
..+.++.+.+.. ..+++..+.. +++| +.++|||.|++.|++++++ +.+++++ +||+.| | ++||+.+|+
T Consensus 151 --e~~~~~~~~~~~--~~~~~~~s~~--~~~i-~~~~sK~~al~~l~~~~~~~~~~~~~i~-~GD~~n-D-~~ml~~ag~ 220 (225)
T TIGR02461 151 --EGWEAILVTARA--RGLKYTHGGR--FYTV-HGGSDKGKAIKRLLDLYKLRPGAIESVG-LGDSEN-D-FPMFEVVDL 220 (225)
T ss_pred --HHHHHHHHHHHH--cCCcEEECCE--EEEE-CCCCCHHHHHHHHHHHhccccCcccEEE-EcCCHH-H-HHHHHhCCC
Confidence 234455555532 3344554433 5775 5599999999999999987 6668888 888888 8 999999999
Q ss_pred EEEeC
Q 001541 1000 TVILK 1004 (1057)
Q Consensus 1000 gVAMg 1004 (1057)
||++|
T Consensus 221 ~v~v~ 225 (225)
T TIGR02461 221 AFLVG 225 (225)
T ss_pred cEecC
Confidence 99986
No 115
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.78 E-value=1.7e-17 Score=176.51 Aligned_cols=119 Identities=31% Similarity=0.449 Sum_probs=98.2
Q ss_pred EEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCC-CcH
Q 001541 480 ALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQ-SDV 557 (1057)
Q Consensus 480 ~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~-~dl 557 (1057)
++|++.+.||++.+++|+..+.+.. +++.+ ++|.+++ .......+..++...+|.+.|+++. +++
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~--~~~~~~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 175 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERG--PDLKLVIAGDGPE-----------REYLEELLAALLLLDRVIFLGGLDPEELL 175 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhC--CCeEEEEEeCCCC-----------hHHHHHHHHhcCCcccEEEeCCCCcHHHH
Confidence 9999999999999999999997433 45664 7787765 2223333667778889999999854 455
Q ss_pred HHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEe
Q 001541 558 PEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLV 615 (1057)
Q Consensus 558 ~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv 615 (1057)
..+++.| |++++|+..|+||++++|||++|+|||+|+.++..|++.++.+|++|
T Consensus 176 ~~~~~~~----di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 176 ALLLAAA----DVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHhhcC----CEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 5566658 99999999999999999999999999999999999999888899875
No 116
>PLN02580 trehalose-phosphatase
Probab=99.76 E-value=1.3e-17 Score=188.82 Aligned_cols=205 Identities=10% Similarity=0.140 Sum_probs=134.0
Q ss_pred cCcceEEEEEecCCCC--------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 771 RRRKHIFVISVDCDST--------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 771 ~~~kkLi~~DiDGTL~--------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
+.++.+||+|+||||. ..+++.++++|+.|.+. ..++|.|||+...+.+++.-.++ +++++
T Consensus 116 ~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~-----~~VAIVSGR~~~~L~~~l~~~~l------~laGs 184 (384)
T PLN02580 116 KGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY-----FPTAIISGRSRDKVYELVGLTEL------YYAGS 184 (384)
T ss_pred hcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC-----CCEEEEeCCCHHHHHHHhCCCCc------cEEEe
Confidence 3467899999999992 56889999999999875 36999999999999999976665 59999
Q ss_pred CCcEEEeccCCCCCCC-----ccccc---cchhh-cccccch--hhH----HHHHHHhhhcccccccccccccccccccc
Q 001541 843 SGSDLYYSTLNSEDGP-----FVVDF---YYHSH-IEYRWGG--EGL----RKTLVRWASQVTDKKAESGEKVLTPAEQL 907 (1057)
Q Consensus 843 nGa~I~~~~~~~~~~~-----~~~d~---~~~~~-i~~~w~~--e~l----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (1057)
||.++..+........ ...+. .|... ....|.. +.+ .+...+.++...|.|
T Consensus 185 HG~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K-------------- 250 (384)
T PLN02580 185 HGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENH-------------- 250 (384)
T ss_pred CCceeecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEec--------------
Confidence 9999976421110000 00001 11000 0112221 111 112222344444433
Q ss_pred cCcceEEEEecCCCCCccHHHHHHHHHH---hcCcEEEEEeeCCeeEEEec-CCCCHHHHHHHHHHHhCCCccc-E-EEE
Q 001541 908 STNYCYAFSVQKPGMTPPVKELRKVLRI---QALRCHVIYCQNGSRINVIP-VLASRSQALRYLYLRWGVELSK-M-VVF 981 (1057)
Q Consensus 908 ~~~~k~~~~~~~~~~~~~~~el~~~l~~---~~~~~~v~~s~~~~~lEI~p-~gasKg~AL~~L~~~lgI~~e~-v-iaf 981 (1057)
.+++++|++..... ....+.+.+.. ....+.++ ++.+++||.| .++|||.||++|++++|++.++ + .+|
T Consensus 251 --~~svavHYR~a~~~-~~~~~~~~l~~~l~~~~~l~v~--~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~ 325 (384)
T PLN02580 251 --KFCVSVHYRNVDEK-NWPLVAQCVHDVLKKYPRLRLT--HGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIY 325 (384)
T ss_pred --CcEEEEEeCCCCch-HHHHHHHHHHHHHHhCCceEEE--eCCeEEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEE
Confidence 68899999764321 11222222221 11224443 4445899999 5999999999999999998774 3 356
Q ss_pred ecCCCCCCccccccC-----cceEEEeCCCc
Q 001541 982 VGESGDTDYEGLLGG-----VHKTVILKGIC 1007 (1057)
Q Consensus 982 ~GD~~n~D~~eML~~-----ag~gVAMgNa~ 1007 (1057)
+||+.| | ++||+. .|+||+|||+.
T Consensus 326 iGDD~T-D-edmF~~L~~~~~G~~I~Vgn~~ 354 (384)
T PLN02580 326 IGDDRT-D-EDAFKVLREGNRGYGILVSSVP 354 (384)
T ss_pred ECCCch-H-HHHHHhhhccCCceEEEEecCC
Confidence 888888 8 999996 59999999987
No 117
>PLN02423 phosphomannomutase
Probab=99.76 E-value=1.7e-17 Score=181.02 Aligned_cols=205 Identities=14% Similarity=0.131 Sum_probs=121.5
Q ss_pred cCcceEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhC-CCCCCCCCeEEeCCCcE
Q 001541 771 RRRKHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSG-HLSPSDFDAFICNSGSD 846 (1057)
Q Consensus 771 ~~~kkLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~l-gl~~~~~D~lI~~nGa~ 846 (1057)
|..+.++++||||||. +.+++.++++|+++++ ++.|++||||++..+.+.+... .. +++++||+||+.
T Consensus 4 ~~~~~i~~~D~DGTLl~~~~~i~~~~~~ai~~l~~-----~i~fviaTGR~~~~~~~~~~~~~~~---~~~~~I~~NGa~ 75 (245)
T PLN02423 4 RKPGVIALFDVDGTLTAPRKEATPEMLEFMKELRK-----VVTVGVVGGSDLSKISEQLGKTVIN---DYDYVFSENGLV 75 (245)
T ss_pred CccceEEEEeccCCCcCCCCcCCHHHHHHHHHHHh-----CCEEEEECCcCHHHHHHHhcccccc---cCCEEEECCceE
Confidence 3455677799999993 6799999999999984 3999999999999888777654 22 134799999999
Q ss_pred EEeccCCCCCCCccccccchhhcccccchhhHHHHHHHhhhcc--cccccccccccccccccccCcceEEEEecCC----
Q 001541 847 LYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQV--TDKKAESGEKVLTPAEQLSTNYCYAFSVQKP---- 920 (1057)
Q Consensus 847 I~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~---- 920 (1057)
|+..+. .. +...+......+.+++++....... ....... ..+.+.......++ +...+.
T Consensus 76 i~~~g~------~i----~~~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~--~~~ie~~~~i~~~~--~~~~~~~~~~ 141 (245)
T PLN02423 76 AHKDGK------LI----GTQSLKSFLGEDKLKEFINFTLHYIADLDIPIKR--GTFIEFRSGMLNVS--PIGRNCSQEE 141 (245)
T ss_pred EEeCCE------EE----EEecccccCCHHHHHHHHHHHHHHHHHcCCcccc--CCeEEccCCccccC--cccccCCHhH
Confidence 995431 11 1111112122233333332211100 0000000 00111000000000 000000
Q ss_pred ----C----CCccHHHHHHHHHHhcCcEEEEEeeCC-eeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecC----CCC
Q 001541 921 ----G----MTPPVKELRKVLRIQALRCHVIYCQNG-SRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGE----SGD 987 (1057)
Q Consensus 921 ----~----~~~~~~el~~~l~~~~~~~~v~~s~~~-~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD----~~n 987 (1057)
. ......++.+.+......+.+..+.++ +++||+|+|+|||.||+.|+ +++++|| ||| ++|
T Consensus 142 ~~~~~~i~~i~~~~~~~~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~-----~~~e~~a-FGD~~~~~~N 215 (245)
T PLN02423 142 RDEFEKYDKVHNIRPKMVSVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE-----DFDEIHF-FGDKTYEGGN 215 (245)
T ss_pred HhhHHhhCccchHHHHHHHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc-----CcCeEEE-EeccCCCCCC
Confidence 0 011234455555554445667666653 49999999999999999999 8999999 777 677
Q ss_pred CCccccccC-cceEEEeCC
Q 001541 988 TDYEGLLGG-VHKTVILKG 1005 (1057)
Q Consensus 988 ~D~~eML~~-ag~gVAMgN 1005 (1057)
| ++||+. .-.++.+.+
T Consensus 216 -D-~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 216 -D-HEIFESERTIGHTVTS 232 (245)
T ss_pred -c-HHHHhCCCcceEEeCC
Confidence 8 999996 446676653
No 118
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.76 E-value=4.1e-16 Score=174.61 Aligned_cols=288 Identities=25% Similarity=0.308 Sum_probs=206.5
Q ss_pred ceEEEEcCCCchH---HHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEe
Q 001541 307 PVAIHGHYADAGD---SAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 383 (1057)
Q Consensus 307 pDvIh~h~~~~~~---~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~ 383 (1057)
+|++|.+...... .........+.+.+...|............ .. ........... ........++.+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~-~~~~~~~~~~~~~~ 156 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRL----LL--LLGLLRLLLKR-LKKALRLLADRVIA 156 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccc----hh--hHHHHHHHHHH-HHHhccccccEEEE
Confidence 5999988753332 345555667889999999875532110000 00 00000000000 00111124777888
Q ss_pred cCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchH
Q 001541 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 463 (1057)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1057)
.+............. .++.++|++++...+.+....
T Consensus 157 ~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~-------------------- 192 (381)
T COG0438 157 VSPALKELLEALGVP------------------------NKIVVIPNGIDTEKFAPARIG-------------------- 192 (381)
T ss_pred CCHHHHHHHHHhCCC------------------------CCceEecCCcCHHHcCccccC--------------------
Confidence 877642221111110 167899999999887642000
Q ss_pred HHHHhhhCCCC--CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHc
Q 001541 464 SEIMRFFTNPR--KPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKY 540 (1057)
Q Consensus 464 ~~~~~~~~~~~--~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~ 540 (1057)
..++ ...++++||+.+.||++.+++++..+....+. .. +++|.++.. ...+..++..+
T Consensus 193 -------~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~--~~~~~~g~~~~~----------~~~~~~~~~~~ 253 (381)
T COG0438 193 -------LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD--IKLVIVGDGPER----------REELEKLAKKL 253 (381)
T ss_pred -------CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC--eEEEEEcCCCcc----------HHHHHHHHHHh
Confidence 0122 37999999999999999999999999743222 44 477887653 23445577777
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCH
Q 001541 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ 620 (1057)
Q Consensus 541 ~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~ 620 (1057)
+..+.|.|+|.++.+++..+|+.| +++++|+..|+||++++||||+|+|||+++.++..+++.++.+|+++.+.|.
T Consensus 254 ~~~~~v~~~g~~~~~~~~~~~~~~----~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~ 329 (381)
T COG0438 254 GLEDNVKFLGYVPDEELAELLASA----DVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDV 329 (381)
T ss_pred CCCCcEEEecccCHHHHHHHHHhC----CEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCH
Confidence 777889999999878999999999 9999999889999999999999999999999999999988777888887789
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHccc
Q 001541 621 QSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGCK 668 (1057)
Q Consensus 621 ~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~~~~ 668 (1057)
+++++++..++++++.++.+..++++.+ ..|+|+..++.+.+.+..+.
T Consensus 330 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (381)
T COG0438 330 EELADALEQLLEDPELREELGEAARERVEEEFSWERIAEQLLELYEELL 378 (381)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 9999999999999988888888777777 69999999999999988654
No 119
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.75 E-value=7.7e-17 Score=174.32 Aligned_cols=249 Identities=18% Similarity=0.137 Sum_probs=152.3
Q ss_pred ceEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEec
Q 001541 774 KHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 850 (1057)
Q Consensus 774 kkLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~ 850 (1057)
.|+||+||||||. ..+.+.++++|++|+++ |+.||+||||++.++..+++++++. +++||+||+.|+.+
T Consensus 1 ~KLIftDLDGTLLd~~~~~~~~a~~aL~~Lk~~----GI~vVlaTGRt~~ev~~l~~~Lgl~----~p~I~eNGA~I~~p 72 (302)
T PRK12702 1 MRLVLSSLDGSLLDLEFNSYGAARQALAALERR----SIPLVLYSLRTRAQLEHLCRQLRLE----HPFICEDGSAIYVP 72 (302)
T ss_pred CcEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHhCCC----CeEEEeCCcEEEEc
Confidence 4799999999993 45788899999999987 9999999999999999999999984 57999999999987
Q ss_pred cCCCCC----C-CccccccchhhcccccchhhHHHHHHHhhhcccc-cccccc--cccc-----c--cc--ccccCcceE
Q 001541 851 TLNSED----G-PFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTD-KKAESG--EKVL-----T--PA--EQLSTNYCY 913 (1057)
Q Consensus 851 ~~~~~~----~-~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~-~~~~~~--~~~~-----~--~~--~~~~~~~k~ 913 (1057)
...... . ....+..|. +........++..+..+...... ...... ...+ + +. ......|..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~--~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SE 150 (302)
T PRK12702 73 EHYFPAGILDEQWQHRPPYYV--CALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSE 150 (302)
T ss_pred cccccccccccccccCCCceE--EecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCc
Confidence 432100 0 001111111 11122233444444433221110 000000 0000 0 00 001223333
Q ss_pred EEEecCCCCCccHHHHHHHHHHhcCcEEEEEeeCCeeEEEec------------------C---CCCHHHHHHHHHHHhC
Q 001541 914 AFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIP------------------V---LASRSQALRYLYLRWG 972 (1057)
Q Consensus 914 ~~~~~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEI~p------------------~---gasKg~AL~~L~~~lg 972 (1057)
.+.....+ ..+++.+.+.+.++ .+++.++.++. . +++||+|++.|.+.|.
T Consensus 151 p~~w~~~~-----~~~~~~~~~~g~~~----~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~ 221 (302)
T PRK12702 151 IFSYSGDP-----ARLREAFAQQEANL----TQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQ 221 (302)
T ss_pred ceEecCCH-----HHHHHHHHHcCCeE----EecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHH
Confidence 33322111 12366666655432 24445778876 5 9999999999999987
Q ss_pred CCcc--cEEEEecCCCCCCccccccCcceEEEeCCCchhhhhhhhhcCCCCCCCCC-cCCCCCeEEccCCCChHHHHHHH
Q 001541 973 VELS--KMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVM-PIDSPNIVQTPEDCTTSDIRSSL 1049 (1057)
Q Consensus 973 I~~e--~viaf~GD~~n~D~~eML~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~vt~~~~~dgI~~aL 1049 (1057)
-... .+++ .||+.| | ++||+.+.++|++.|......- ..| + .++ |...+... .|......|=.+++
T Consensus 222 ~~~~~~~tia-LGDspN-D-~~mLe~~D~~vvi~~~~~~~~~-~~~-----~-~l~~~~~~~~~~-~a~~~GP~GW~e~v 290 (302)
T PRK12702 222 RHLGPIKALG-IGCSPP-D-LAFLRWSEQKVVLPSPIADSLW-KEA-----L-RLGGPEVQPQWQ-LAQLPGPEGWNEVV 290 (302)
T ss_pred hccCCceEEE-ecCChh-h-HHHHHhCCeeEEecCCCCCCcc-ccc-----c-cccCcccCccce-ecCCCCcHHHHHHH
Confidence 6523 5777 899999 9 9999999999999877622210 000 0 000 22334444 66788888988888
Q ss_pred HHh
Q 001541 1050 EQL 1052 (1057)
Q Consensus 1050 ~~~ 1052 (1057)
.++
T Consensus 291 ~~~ 293 (302)
T PRK12702 291 LMW 293 (302)
T ss_pred HHH
Confidence 764
No 120
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=99.75 E-value=2.2e-17 Score=180.27 Aligned_cols=193 Identities=12% Similarity=0.088 Sum_probs=125.9
Q ss_pred cceEEEEEecCCCC--------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCC
Q 001541 773 RKHIFVISVDCDST--------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSG 844 (1057)
Q Consensus 773 ~kkLi~~DiDGTL~--------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nG 844 (1057)
++++||+|+||||. ..+++.++++|+.|.+. +++.|+|+|||++.++...+.--++ +++++||
T Consensus 2 ~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~---~~~~v~ivSGR~~~~~~~~~~~~~~------~l~g~hG 72 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAAR---PHNAIWIISGRKFLEKWLGVKLPGL------GLAGEHG 72 (244)
T ss_pred CcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhC---CCCeEEEEECCChhhccccCCCCce------eEEeecC
Confidence 57899999999993 34678999999999887 6788899999988776544321122 5999999
Q ss_pred cEEEeccCCCCCCCccccccchhh--cccccch--hhHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCC
Q 001541 845 SDLYYSTLNSEDGPFVVDFYYHSH--IEYRWGG--EGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKP 920 (1057)
Q Consensus 845 a~I~~~~~~~~~~~~~~d~~~~~~--i~~~w~~--e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 920 (1057)
++++..+... .|... ....|.. ..+..+....+++..+.+ .++++++++..
T Consensus 73 ~~~~~~g~~~---------~~~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K----------------~~s~~~hyr~a 127 (244)
T TIGR00685 73 CEMKDNGSCQ---------DWVNLTEKIPSWKVRANELREEITTRPGVFIERK----------------GVALAWHYRQA 127 (244)
T ss_pred EEEecCCCcc---------eeeechhhhhhHHHHHHHHHHHHhcCCCcEEEec----------------ceEEEEEeccC
Confidence 9998633110 11110 0012321 112222222244444333 46788888654
Q ss_pred -CCCccHHHHHHHHHHh--cCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCc
Q 001541 921 -GMTPPVKELRKVLRIQ--ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGV 997 (1057)
Q Consensus 921 -~~~~~~~el~~~l~~~--~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~a 997 (1057)
+.......+.+.+... ...+.++ .+..++||.|.++|||.|++.++++++++.+++++ +||+.| | ++||+.+
T Consensus 128 ~d~~~~~~~~~~~~~~~~~~~~~~v~--~g~~~~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~-iGD~~~-D-~~~~~~~ 202 (244)
T TIGR00685 128 PVPELARFRAKELKEKILSFTDLEVM--DGKAVVELKPRFVNKGEIVKRLLWHQPGSGISPVY-LGDDIT-D-EDAFRVV 202 (244)
T ss_pred CCcHHHHHHHHHHHHHHhcCCCEEEE--ECCeEEEEeeCCCCHHHHHHHHHHhcccCCCceEE-EcCCCc-H-HHHHHHH
Confidence 2111112223333221 1234333 44458999999999999999999999999888877 888888 8 9999988
Q ss_pred --------ceEEEeC
Q 001541 998 --------HKTVILK 1004 (1057)
Q Consensus 998 --------g~gVAMg 1004 (1057)
+.+|+|+
T Consensus 203 ~~~~~~~g~~~v~v~ 217 (244)
T TIGR00685 203 NNQWGNYGFYPVPIG 217 (244)
T ss_pred hcccCCCCeEEEEEe
Confidence 6889995
No 121
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.75 E-value=8.7e-16 Score=175.78 Aligned_cols=245 Identities=11% Similarity=0.063 Sum_probs=164.6
Q ss_pred Ccc-eEEEEcCCCc-h--HHHHH--HHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcC
Q 001541 305 VWP-VAIHGHYADA-G--DSAAL--LSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDAS 378 (1057)
Q Consensus 305 ~~p-DvIh~h~~~~-~--~~a~~--l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~a 378 (1057)
.++ |+||.|++.. + ....+ ..+..|+|+|+++|++++..... . . ..+ ..|...++.|
T Consensus 62 ~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~---~----------~--~~~--~~~~~~~~~a 124 (333)
T PRK09814 62 LKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDS---N----------Y--YLM--KEEIDMLNLA 124 (333)
T ss_pred CCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccc---c----------c--hhh--HHHHHHHHhC
Confidence 346 9999998733 2 11222 22334899999999987643210 0 0 011 2366789999
Q ss_pred CEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCC
Q 001541 379 EIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASP 458 (1057)
Q Consensus 379 d~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~ 458 (1057)
|.||+.|+...+.+... |....++.++++..+.....+..
T Consensus 125 D~iI~~S~~~~~~l~~~-----------------------g~~~~~i~~~~~~~~~~~~~~~~----------------- 164 (333)
T PRK09814 125 DVLIVHSKKMKDRLVEE-----------------------GLTTDKIIVQGIFDYLNDIELVK----------------- 164 (333)
T ss_pred CEEEECCHHHHHHHHHc-----------------------CCCcCceEecccccccccccccc-----------------
Confidence 99999999987765331 22223677776554332111000
Q ss_pred CCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHH
Q 001541 459 DPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLI 537 (1057)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~ 537 (1057)
.....+.|+|+|++...+++.. .. +++. +|+|+++...
T Consensus 165 ------------~~~~~~~i~yaG~l~k~~~l~~----------~~--~~~~l~i~G~g~~~~----------------- 203 (333)
T PRK09814 165 ------------TPSFQKKINFAGNLEKSPFLKN----------WS--QGIKLTVFGPNPEDL----------------- 203 (333)
T ss_pred ------------cccCCceEEEecChhhchHHHh----------cC--CCCeEEEECCCcccc-----------------
Confidence 0134568999999994432211 11 2344 4789887421
Q ss_pred HHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcC-C----------CCCCCHHHHHHHHcCCcEEEcCCCCchhhh
Q 001541 538 DKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPA-F----------IEPFGLTLIEAAAHGLPIVATKNGGPVDIH 606 (1057)
Q Consensus 538 ~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps-~----------~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv 606 (1057)
...++|.|.|+++.++++.+|+.. +.+++. . .-.+|.++.||||||+|||+++.|+..++|
T Consensus 204 ---~~~~~V~f~G~~~~eel~~~l~~~-----~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V 275 (333)
T PRK09814 204 ---ENSANISYKGWFDPEELPNELSKG-----FGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFI 275 (333)
T ss_pred ---ccCCCeEEecCCCHHHHHHHHhcC-----cCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHH
Confidence 234689999999999999999874 333332 1 235788999999999999999999999999
Q ss_pred hcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHH
Q 001541 607 RVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKT 659 (1057)
Q Consensus 607 ~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~ 659 (1057)
+++.+|++++ +.++++++|..+ +++++++|++++++..+++.--...++
T Consensus 276 ~~~~~G~~v~--~~~el~~~l~~~--~~~~~~~m~~n~~~~~~~~~~g~~~~~ 324 (333)
T PRK09814 276 VENGLGFVVD--SLEELPEIIDNI--TEEEYQEMVENVKKISKLLRNGYFTKK 324 (333)
T ss_pred HhCCceEEeC--CHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence 9999999998 788999999885 357789999999998865444333333
No 122
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.74 E-value=4.7e-15 Score=159.20 Aligned_cols=382 Identities=16% Similarity=0.137 Sum_probs=240.1
Q ss_pred HHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCcccccccccCCCC
Q 001541 197 VVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPH 276 (1057)
Q Consensus 197 v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~ 276 (1057)
+..=|..|++.| ++|+++.-..+-| . +++...+.++|+.++..|.-.+.++.
T Consensus 29 MqYHA~Sla~~g--f~VdliGy~~s~p---------~------------e~l~~hprI~ih~m~~l~~~~~~p~~----- 80 (444)
T KOG2941|consen 29 MQYHALSLAKLG--FQVDLIGYVESIP---------L------------EELLNHPRIRIHGMPNLPFLQGGPRV----- 80 (444)
T ss_pred HHHHHHHHHHcC--CeEEEEEecCCCC---------h------------HHHhcCCceEEEeCCCCcccCCCchh-----
Confidence 334578889999 9999996554212 1 22333579999999875542222211
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC---CchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhc
Q 001541 277 IPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA---DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARL 353 (1057)
Q Consensus 277 l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~---~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~ 353 (1057)
....-+++..+..+...|.. . ..||+|..+++ ....++.+.+...+.+++++.|+++.. ..--+..|..
T Consensus 81 -~~l~lKvf~Qfl~Ll~aL~~----~--~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ys-l~l~~~~g~~ 152 (444)
T KOG2941|consen 81 -LFLPLKVFWQFLSLLWALFV----L--RPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYS-LQLKLKLGFQ 152 (444)
T ss_pred -hhhHHHHHHHHHHHHHHHHh----c--cCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHH-HHHHhhcCCC
Confidence 11111222222211122221 1 45999999886 234455666678899999999999775 2212222322
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCC
Q 001541 354 SRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGME 433 (1057)
Q Consensus 354 ~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD 433 (1057)
+...+..++. |+..-+.||.-+|+|+.+.+++....+- -+-+.+|.+++. -|..+|
T Consensus 153 -----h~lV~l~~~~--E~~fgk~a~~nLcVT~AMr~dL~qnWgi-------------~ra~v~YDrPps----~~~~l~ 208 (444)
T KOG2941|consen 153 -----HPLVRLVRWL--EKYFGKLADYNLCVTKAMREDLIQNWGI-------------NRAKVLYDRPPS----KPTPLD 208 (444)
T ss_pred -----CchHHHHHHH--HHHhhcccccchhhHHHHHHHHHHhcCC-------------ceeEEEecCCCC----CCCchh
Confidence 2234445554 7889999999999999988776554331 112334444443 111111
Q ss_pred CCC--cCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhh-----CCCCCc-EEEEEeCCCCCCCHHHHHHHHHh-----c
Q 001541 434 FHH--IVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFF-----TNPRKP-VILALARPDPKKNITTLVKAFGE-----C 500 (1057)
Q Consensus 434 ~~~--f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~Il~vGRl~~~Kgi~~Ll~A~~~-----l 500 (1057)
..+ |.+...+......+.. ........+...++- ..+..| ++++.-...|..++..|++|+.. .
T Consensus 209 ~~H~lf~~l~~d~~~f~ar~~---q~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~ 285 (444)
T KOG2941|consen 209 EQHELFMKLAGDHSPFRAREP---QDKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLY 285 (444)
T ss_pred HHHHHHhhhccccchhhhccc---ccchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhh
Confidence 111 2222211110111000 001111111111111 123344 55666678899999999999983 3
Q ss_pred ccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCC-CC
Q 001541 501 RPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF-IE 578 (1057)
Q Consensus 501 ~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~-~E 578 (1057)
.+....|.+.. |.|.||. .+...+.+.++++...-.-..++..+|.|.++..|+ .+|++.+|. .=
T Consensus 286 ~~~~~lP~llciITGKGPl-----------kE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saD--lGVcLHtSSSGL 352 (444)
T KOG2941|consen 286 DKTHNLPSLLCIITGKGPL-----------KEKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASAD--LGVCLHTSSSGL 352 (444)
T ss_pred hccCCCCcEEEEEcCCCch-----------hHHHHHHHHHhcccceeeeecccccccchhHhhccc--cceEeeecCccc
Confidence 33455677764 6687875 566778889999976556688999999999999993 356666663 23
Q ss_pred CCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHhhcCCHH
Q 001541 579 PFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVA----DKQLWARCRQNGLKNIHLFSWP 654 (1057)
Q Consensus 579 gfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~----d~~~~~~~~~~~~~~v~~fsw~ 654 (1057)
-.|++++....||+||+|-+...+.|+|+++.||++|+ |.+++++.|.-++. +..+..++.+|.++. +...|+
T Consensus 353 DLPMKVVDMFGcglPvcA~~fkcl~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~-~e~RW~ 429 (444)
T KOG2941|consen 353 DLPMKVVDMFGCGLPVCAVNFKCLDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELNQLKKNLREE-QELRWD 429 (444)
T ss_pred CcchhHHHhhcCCCceeeecchhHHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH-HhhhHH
Confidence 47899999999999999999999999999999999998 99999999999998 788888888888887 455555
Q ss_pred HHH
Q 001541 655 EHC 657 (1057)
Q Consensus 655 ~~a 657 (1057)
..-
T Consensus 430 ~~W 432 (444)
T KOG2941|consen 430 ESW 432 (444)
T ss_pred HHH
Confidence 433
No 123
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.73 E-value=1.1e-16 Score=185.67 Aligned_cols=273 Identities=14% Similarity=0.070 Sum_probs=175.7
Q ss_pred CcceEEEEcC-CCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEe
Q 001541 305 VWPVAIHGHY-ADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 383 (1057)
Q Consensus 305 ~~pDvIh~h~-~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~ 383 (1057)
.+||+||+|. ...+..+++++..+++|++++.+++-..... ..++. .+.++ .....||.+++
T Consensus 85 ~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~~s~~~~-----~~~~~-------~~~r~-----~~~~~ad~~~~ 147 (365)
T TIGR00236 85 EKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRTGDRY-----SPMPE-------EINRQ-----LTGHIADLHFA 147 (365)
T ss_pred cCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCCCcCCCC-----CCCcc-------HHHHH-----HHHHHHHhccC
Confidence 6799999996 4666778888889999998775554110000 00000 01111 12334899999
Q ss_pred cCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCC-CCCCcCCCCCCCCCCCCCCCCCCCCCCCch
Q 001541 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGM-EFHHIVPQDGDMDGETEGNEDNPASPDPPI 462 (1057)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGi-D~~~f~p~~~~~~~~~~~~~~~~~~~~~~~ 462 (1057)
+|+...+.+.+ .|.+..++.+++||+ |...+..... ..
T Consensus 148 ~s~~~~~~l~~-----------------------~G~~~~~I~vign~~~d~~~~~~~~~------------------~~ 186 (365)
T TIGR00236 148 PTEQAKDNLLR-----------------------ENVKADSIFVTGNTVIDALLTNVEIA------------------YS 186 (365)
T ss_pred CCHHHHHHHHH-----------------------cCCCcccEEEeCChHHHHHHHHHhhc------------------cc
Confidence 99987776543 233445899999996 4322211000 00
Q ss_pred HHHHHhhhCCCCCcEEEEEe-CC-CCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHH
Q 001541 463 WSEIMRFFTNPRKPVILALA-RP-DPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDK 539 (1057)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vG-Rl-~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~ 539 (1057)
..+.+.+. .+++++++.+ |. ...||+..+++|+.++.... +++.+ +++.+.. + .... +.+.
T Consensus 187 -~~~~~~~~-~~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~--~~~~~vi~~~~~~-~--------~~~~---~~~~ 250 (365)
T TIGR00236 187 -SPVLSEFG-EDKRYILLTLHRRENVGEPLENIFKAIREIVEEF--EDVQIVYPVHLNP-V--------VREP---LHKH 250 (365)
T ss_pred -hhHHHhcC-CCCCEEEEecCchhhhhhHHHHHHHHHHHHHHHC--CCCEEEEECCCCh-H--------HHHH---HHHH
Confidence 11112222 3346666666 43 24589999999999986433 34443 3333211 0 1111 2333
Q ss_pred cCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEc-CCCCchhhhhcCCceEEeCCC
Q 001541 540 YDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT-KNGGPVDIHRVLDNGLLVDPH 618 (1057)
Q Consensus 540 ~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat-~~Gg~~eiv~~~~~Gllv~p~ 618 (1057)
++..++|.|.+.++..++..+|+.| |++|.+| |...+|||+||+|||++ +.|+..+++..+ .++++ +.
T Consensus 251 ~~~~~~v~~~~~~~~~~~~~~l~~a----d~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv-~~ 319 (365)
T TIGR00236 251 LGDSKRVHLIEPLEYLDFLNLAANS----HLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLV-GT 319 (365)
T ss_pred hCCCCCEEEECCCChHHHHHHHHhC----CEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEe-CC
Confidence 4556789999999889999999999 9998877 56689999999999996 678888888755 56667 57
Q ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHH
Q 001541 619 DQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLS 662 (1057)
Q Consensus 619 d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~ 662 (1057)
|+++++++|.+++++++.+++++++...+-...+++++++.+.+
T Consensus 320 d~~~i~~ai~~ll~~~~~~~~~~~~~~~~g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 320 DKENITKAAKRLLTDPDEYKKMSNASNPYGDGEASERIVEELLN 363 (365)
T ss_pred CHHHHHHHHHHHHhChHHHHHhhhcCCCCcCchHHHHHHHHHHh
Confidence 99999999999999999888887665322234555555554443
No 124
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.70 E-value=9.9e-16 Score=185.20 Aligned_cols=338 Identities=16% Similarity=0.182 Sum_probs=219.7
Q ss_pred CcceEEEEcCCCchHHHHHHHhc--------------CCCCEEEEecCCchhhH---H-HHHHh--------hhcchHHH
Q 001541 305 VWPVAIHGHYADAGDSAALLSGA--------------LNVPMLFTGHSLGRDKL---E-QLLKQ--------ARLSRDEI 358 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~--------------~~iP~V~t~H~l~~~~~---~-~l~~~--------g~~~~~~~ 358 (1057)
.+|||||+|.|.++.+...+.+. .+..+|+|.|++.+.-. . .++.. -.++...+
T Consensus 160 ~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~~~gl~~~~~ 239 (601)
T TIGR02094 160 IDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAANLGLPREQL 239 (601)
T ss_pred CCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhhHhCCCHHHH
Confidence 47999999999888877664221 14678999999865432 1 11110 00111111
Q ss_pred HHHHHHH----HHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCC
Q 001541 359 NATYKIM----RRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEF 434 (1057)
Q Consensus 359 ~~~yk~~----~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~ 434 (1057)
....... ..+..-+.++..|+.|.++|+...+...++...+.+..+ . ...++.-|-||||.
T Consensus 240 ~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l~~~~~----~-----------~~~~i~gItNGId~ 304 (601)
T TIGR02094 240 LALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFLYPGYE----E-----------EEVPIGYVTNGVHN 304 (601)
T ss_pred HhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhhhhhcc----c-----------ccCCccceeCCccc
Confidence 1100000 123345678999999999998766632222221111000 0 00147889999999
Q ss_pred CCcCCCCCCC-------CC---CC---CCCCCCCCCCCCchH-------HHHHhh------------------------h
Q 001541 435 HHIVPQDGDM-------DG---ET---EGNEDNPASPDPPIW-------SEIMRF------------------------F 470 (1057)
Q Consensus 435 ~~f~p~~~~~-------~~---~~---~~~~~~~~~~~~~~~-------~~~~~~------------------------~ 470 (1057)
..+.|..... .. +. +....-........| ..+.++ .
T Consensus 305 ~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~gl~ 384 (601)
T TIGR02094 305 PTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMATDRF 384 (601)
T ss_pred cccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhhccc
Confidence 9887532100 00 00 000000000000011 011111 1
Q ss_pred CCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccC--CCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEE
Q 001541 471 TNPRKPVILALARPDPKKNITTLVKAFGECRPLRE--LANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVA 547 (1057)
Q Consensus 471 ~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~--~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~ 547 (1057)
..++.++|++++|+..+||.+.++.++.++..... ...++ +++|.+...+.+ ..++...+..++++....++|.
T Consensus 385 ~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~---gk~~i~~i~~la~~~~~~~kv~ 461 (601)
T TIGR02094 385 LDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGE---GKEIIQRIVEFSKRPEFRGRIV 461 (601)
T ss_pred cCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccch---HHHHHHHHHHHHhcccCCCCEE
Confidence 45788999999999999999999999998864211 12355 466777654333 2456777888887755667888
Q ss_pred eCCCCCCCcHHHHHHHhhcCCcEEEE-cCC-CCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCC--------
Q 001541 548 YPKHHKQSDVPEIYRLAAKTKGVFIN-PAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDP-------- 617 (1057)
Q Consensus 548 f~g~v~~~dl~~ly~~Aa~~~dv~v~-ps~-~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p-------- 617 (1057)
|.-..+.+--..+|+.| |++++ |+. +|++|++=+=||..|.+.+++..|...|.. ++.||+.+.+
T Consensus 462 f~~~Yd~~lA~~i~aG~----Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~~~~~~ 536 (601)
T TIGR02094 462 FLENYDINLARYLVSGV----DVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEEYDDEE 536 (601)
T ss_pred EEcCCCHHHHHHHhhhh----eeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCccccccc
Confidence 87766544455666666 99999 888 999999999999999999999999998876 5689999984
Q ss_pred ----CCHHHHHHHHHHHH-----hC-----HHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 001541 618 ----HDQQSVADALLKLV-----AD-----KQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 618 ----~d~~~la~aI~~ll-----~d-----~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~ 665 (1057)
.|.++|.++|.+.+ ++ |..|.++.+++++.. ..|||.+++++|.+.|-
T Consensus 537 ~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~yy 599 (601)
T TIGR02094 537 EQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKFY 599 (601)
T ss_pred cccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhC
Confidence 89999999997766 23 667999999999987 69999999999999873
No 125
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.70 E-value=1.1e-15 Score=176.69 Aligned_cols=250 Identities=14% Similarity=0.083 Sum_probs=165.5
Q ss_pred CcceEEEEcCC-CchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEe
Q 001541 305 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 383 (1057)
Q Consensus 305 ~~pDvIh~h~~-~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~ 383 (1057)
.+||+||+|.. .....+..+++..++|++++.|+...... +. .. ...++ ...+.+|.+++
T Consensus 87 ~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~~------~~-~~-------~~~r~-----~~~~~ad~~~~ 147 (363)
T cd03786 87 EKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFDR------GM-PD-------EENRH-----AIDKLSDLHFA 147 (363)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCCC------CC-Cc-------hHHHH-----HHHHHhhhccC
Confidence 57999999974 45566777788889999987775422100 00 00 01111 23567899999
Q ss_pred cCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCC-CCCCcCCCCCCCCCCCCCCCCCCCCCCCch
Q 001541 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGM-EFHHIVPQDGDMDGETEGNEDNPASPDPPI 462 (1057)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGi-D~~~f~p~~~~~~~~~~~~~~~~~~~~~~~ 462 (1057)
+|+...+.+.+ +|.+..++.+++|++ |...+.+.... .
T Consensus 148 ~s~~~~~~l~~-----------------------~G~~~~kI~vign~v~d~~~~~~~~~~----------------~-- 186 (363)
T cd03786 148 PTEEARRNLLQ-----------------------EGEPPERIFVVGNTMIDALLRLLELAK----------------K-- 186 (363)
T ss_pred CCHHHHHHHHH-----------------------cCCCcccEEEECchHHHHHHHHHHhhc----------------c--
Confidence 99887665432 233445899999985 54333211100 0
Q ss_pred HHHHHhhhCCCCCcEEEEEeCCCC---CCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHH
Q 001541 463 WSEIMRFFTNPRKPVILALARPDP---KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDK 539 (1057)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vGRl~~---~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~ 539 (1057)
...+..++..++..++++.||+.. .||++.+++|+..+... ++.+++++.+. ....+.+.+.+
T Consensus 187 ~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~----~~~vi~~~~~~----------~~~~l~~~~~~ 252 (363)
T cd03786 187 ELILELLGLLPKKYILVTLHRVENVDDGEQLEEILEALAELAEE----DVPVVFPNHPR----------TRPRIREAGLE 252 (363)
T ss_pred chhhhhcccCCCCEEEEEeCCccccCChHHHHHHHHHHHHHHhc----CCEEEEECCCC----------hHHHHHHHHHh
Confidence 000122333344456778888775 79999999999988531 45444433221 13456666777
Q ss_pred cCC-CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCC-CCchhhhhcCCceEEeCC
Q 001541 540 YDL-YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN-GGPVDIHRVLDNGLLVDP 617 (1057)
Q Consensus 540 ~~l-~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~-Gg~~eiv~~~~~Gllv~p 617 (1057)
+++ .++|.|.+....++++.+|+.| |++|.+|- | +..|||++|+|||+++. +..++.+++ |+.+..
T Consensus 253 ~~~~~~~v~~~~~~~~~~~~~l~~~a----d~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~---g~~~~~ 320 (363)
T cd03786 253 FLGHHPNVLLISPLGYLYFLLLLKNA----DLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVES---GTNVLV 320 (363)
T ss_pred hccCCCCEEEECCcCHHHHHHHHHcC----cEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhhe---eeEEec
Confidence 766 6789999988888999999999 99999984 4 46899999999999975 445666653 443333
Q ss_pred -CCHHHHHHHHHHHHhCHHHHHHH
Q 001541 618 -HDQQSVADALLKLVADKQLWARC 640 (1057)
Q Consensus 618 -~d~~~la~aI~~ll~d~~~~~~~ 640 (1057)
.|+++++++|.++++++..+..+
T Consensus 321 ~~~~~~i~~~i~~ll~~~~~~~~~ 344 (363)
T cd03786 321 GTDPEAILAAIEKLLSDEFAYSLM 344 (363)
T ss_pred CCCHHHHHHHHHHHhcCchhhhcC
Confidence 37999999999999998776655
No 126
>PLN03017 trehalose-phosphatase
Probab=99.69 E-value=3e-16 Score=176.25 Aligned_cols=201 Identities=12% Similarity=0.138 Sum_probs=131.4
Q ss_pred CcceEEEEEecCCCC-------C-cchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCC
Q 001541 772 RRKHIFVISVDCDST-------T-GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNS 843 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL~-------~-~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~n 843 (1057)
.++.+||+|+||||. + .+++.++++|++|. + ++.|+|+|||++..+.+++.-.+ -++||+|
T Consensus 109 ~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~----~~~vaIvSGR~~~~l~~~~~l~~------l~l~g~h 177 (366)
T PLN03017 109 GKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-K----CFPTAIVTGRCIDKVYNFVKLAE------LYYAGSH 177 (366)
T ss_pred CCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-c----CCcEEEEeCCCHHHHHHhhcccC------ceEEEcC
Confidence 467899999999994 2 68999999999999 4 68899999999999998854322 2799999
Q ss_pred CcEEEeccCC-CCCC------CccccccchhhcccccchhhHHHHHHHhhhcccccccccccccccccccccCcceEEEE
Q 001541 844 GSDLYYSTLN-SEDG------PFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFS 916 (1057)
Q Consensus 844 Ga~I~~~~~~-~~~~------~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 916 (1057)
|++|..+... .... .......|...+.. ....+.....+.++...|.| .+++++|
T Consensus 178 Ga~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~--v~~~L~~~~~~~pGa~VE~K----------------~~~vavH 239 (366)
T PLN03017 178 GMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDE--VYRQLLEKTKSTPGAKVENH----------------KFCASVH 239 (366)
T ss_pred CcEEecCCCcceeccccccccccccchhhHHHHHH--HHHHHHHHHhcCCCCEEEec----------------CcEEEEE
Confidence 9999875421 0000 00000111111110 00112233334455555444 6889999
Q ss_pred ecCCCCCccHHHHHHHHHHh---cCcEEEEEeeCCeeEEEecC-CCCHHHHHHHHHHHhCCCc--ccEEEEecCCCCCCc
Q 001541 917 VQKPGMTPPVKELRKVLRIQ---ALRCHVIYCQNGSRINVIPV-LASRSQALRYLYLRWGVEL--SKMVVFVGESGDTDY 990 (1057)
Q Consensus 917 ~~~~~~~~~~~el~~~l~~~---~~~~~v~~s~~~~~lEI~p~-gasKg~AL~~L~~~lgI~~--e~viaf~GD~~n~D~ 990 (1057)
++..+. ....++...+... ...+ ...++.+.+||.|. +.+||.|+++|++.+|+.- ..+++|+||+-+ |
T Consensus 240 yR~ad~-~~~~~l~~~~~~vl~~~~~l--~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~T-D- 314 (366)
T PLN03017 240 FRCVDE-KKWSELVLQVRSVLKNFPTL--KLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRT-D- 314 (366)
T ss_pred cCcCCH-HHHHHHHHHHHHHHHhCCCc--EEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCc-c-
Confidence 975432 1223343333321 1223 33456569999995 9999999999999998764 346778999888 9
Q ss_pred cccccCc-----ceEEEeCCC
Q 001541 991 EGLLGGV-----HKTVILKGI 1006 (1057)
Q Consensus 991 ~eML~~a-----g~gVAMgNa 1006 (1057)
++||+.+ |.||.+|..
T Consensus 315 EDaF~~L~~~~~G~gI~VG~~ 335 (366)
T PLN03017 315 EDAFKMLRDRGEGFGILVSKF 335 (366)
T ss_pred HHHHHHHhhcCCceEEEECCC
Confidence 9999966 578888843
No 127
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.69 E-value=1.9e-15 Score=176.18 Aligned_cols=249 Identities=14% Similarity=0.037 Sum_probs=156.6
Q ss_pred CcceEEEEcCC-CchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEe
Q 001541 305 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 383 (1057)
Q Consensus 305 ~~pDvIh~h~~-~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~ 383 (1057)
.+||+||++.. ......+..++..++|+++..|...... .....+ ...+.+|.|++
T Consensus 84 ~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~~~~~-----------------~~~~~~------~~~~~~d~i~~ 140 (380)
T PRK00025 84 EPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPSVWAW-----------------RQGRAF------KIAKATDHVLA 140 (380)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCchhhc-----------------CchHHH------HHHHHHhhhee
Confidence 67999999863 2222223334556999998766431100 000111 13567899999
Q ss_pred cCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchH
Q 001541 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 463 (1057)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1057)
+++.+.+.+.. + |+ ++.+++|++....... +...
T Consensus 141 ~~~~~~~~~~~-~-----------------g~--------~~~~~G~p~~~~~~~~--------------------~~~~ 174 (380)
T PRK00025 141 LFPFEAAFYDK-L-----------------GV--------PVTFVGHPLADAIPLL--------------------PDRA 174 (380)
T ss_pred CCccCHHHHHh-c-----------------CC--------CeEEECcCHHHhcccc--------------------cChH
Confidence 98765544321 1 11 3556666553221100 0011
Q ss_pred HHHHhhhCCCCCcEEEE-Ee-CCCCC-CCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHH
Q 001541 464 SEIMRFFTNPRKPVILA-LA-RPDPK-KNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDK 539 (1057)
Q Consensus 464 ~~~~~~~~~~~~~~Il~-vG-Rl~~~-Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~ 539 (1057)
..+.++..++++++|+. .| |.... ++++.+++|+..+.+. .+++.+ ++|+.+. ....+.+++.+
T Consensus 175 ~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~--~~~~~~ii~~~~~~----------~~~~~~~~~~~ 242 (380)
T PRK00025 175 AARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQR--YPDLRFVLPLVNPK----------RREQIEEALAE 242 (380)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEecCChh----------hHHHHHHHHhh
Confidence 22334444556676544 34 44343 4578999999988643 345554 4444221 13455666666
Q ss_pred c-CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEc-----------------CCCC
Q 001541 540 Y-DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT-----------------KNGG 601 (1057)
Q Consensus 540 ~-~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat-----------------~~Gg 601 (1057)
+ ++. +.+. ..++..+|+.| |++|.+| |.+.+|||++|+|+|++ +.++
T Consensus 243 ~~~~~--v~~~----~~~~~~~~~~a----Dl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~ 307 (380)
T PRK00025 243 YAGLE--VTLL----DGQKREAMAAA----DAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVS 307 (380)
T ss_pred cCCCC--eEEE----cccHHHHHHhC----CEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeee
Confidence 6 553 4443 25899999999 9999987 88888999999999987 5667
Q ss_pred chhhhhcCC--ceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhh
Q 001541 602 PVDIHRVLD--NGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIH 649 (1057)
Q Consensus 602 ~~eiv~~~~--~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~ 649 (1057)
.++++.++. .+++.+..|+++++++|.++++|++.++++++++.+..+
T Consensus 308 l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 357 (380)
T PRK00025 308 LPNLLAGRELVPELLQEEATPEKLARALLPLLADGARRQALLEGFTELHQ 357 (380)
T ss_pred hHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 778876653 457778889999999999999999999999998765553
No 128
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=99.63 E-value=3.1e-15 Score=161.79 Aligned_cols=194 Identities=13% Similarity=0.161 Sum_probs=137.3
Q ss_pred cCcceEEEEEecCCCC--------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 771 RRRKHIFVISVDCDST--------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 771 ~~~kkLi~~DiDGTL~--------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
..++++||+|+||||+ ..+++.++++|+.|.++ +.+.++|+|||+..++..++.-.++ ++||+
T Consensus 15 ~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~---~~~~v~iiSGR~~~~l~~~~~v~~i------~l~ae 85 (266)
T COG1877 15 NARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASD---PRNVVAIISGRSLAELERLFGVPGI------GLIAE 85 (266)
T ss_pred cccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhc---CCCeEEEEeCCCHHHHHHhcCCCCc------cEEEe
Confidence 6789999999999994 45788999999999998 6777999999999999999985555 59999
Q ss_pred CCcEEEeccCCC-CCCCccccccchhhcccccchhhHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCC
Q 001541 843 SGSDLYYSTLNS-EDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPG 921 (1057)
Q Consensus 843 nGa~I~~~~~~~-~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 921 (1057)
||+++....+.. .......+..|...+ .+.++.++.++|++..+.| .+.++||+++.+
T Consensus 86 hGa~~r~~~g~~~~~~~~~~~~~~~~~v-----~~~l~~~v~r~pGs~iE~K----------------~~a~~~Hyr~a~ 144 (266)
T COG1877 86 HGAEVRDPNGKWWINLAEEADLRWLKEV-----AAILEYYVERTPGSYIERK----------------GFAVALHYRNAE 144 (266)
T ss_pred cceEEecCCCCeeEecCHHHHhhHHHHH-----HHHHHHHhhcCCCeEEEEc----------------CcEEEEeeccCC
Confidence 999996543211 111111112222222 2356778888888888776 567889987655
Q ss_pred CCcc-HHHHHHHHHHhcCc-EEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcce
Q 001541 922 MTPP-VKELRKVLRIQALR-CHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHK 999 (1057)
Q Consensus 922 ~~~~-~~el~~~l~~~~~~-~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~ 999 (1057)
.... ...+.+........ ++++ .+...+|+.|.++|||.++++++++.+.+- .++.|.||+-+ | ++||+.+..
T Consensus 145 ~~~~~~~a~~~~~~~~~~~~~~v~--~gk~vVEvrp~~~~KG~a~~~i~~~~~~~~-~~~~~aGDD~T-D-E~~F~~v~~ 219 (266)
T COG1877 145 DDEGAALALAEAATLINELKLRVT--PGKMVVELRPPGVSKGAAIKYIMDELPFDG-RFPIFAGDDLT-D-EDAFAAVNK 219 (266)
T ss_pred chhhHHHHHHHHHhccccccEEEE--eCceEEEEeeCCcchHHHHHHHHhcCCCCC-CcceecCCCCc-c-HHHHHhhcc
Confidence 2211 12222222222222 4443 333489999999999999999999987764 56666898888 9 999999873
No 129
>PLN02151 trehalose-phosphatase
Probab=99.63 E-value=3.2e-15 Score=167.50 Aligned_cols=202 Identities=10% Similarity=0.158 Sum_probs=130.9
Q ss_pred cCcceEEEEEecCCCC--------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 771 RRRKHIFVISVDCDST--------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 771 ~~~kkLi~~DiDGTL~--------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
..++.+||+|+||||. ..+++.++++|+.|.+ +..++|+|||++..+.+++.-.++ +++++
T Consensus 95 ~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~-----~~~vaIvSGR~~~~l~~~~~~~~l------~laGs 163 (354)
T PLN02151 95 EGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAK-----CFPTAIVSGRCREKVSSFVKLTEL------YYAGS 163 (354)
T ss_pred cCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhc-----CCCEEEEECCCHHHHHHHcCCccc------eEEEe
Confidence 3567899999999993 3689999999999995 467999999999999999865454 68999
Q ss_pred CCcEEEeccCCCCCCCccccccc-hhhcccccchh------hHHHHHHHhhhcccccccccccccccccccccCcceEEE
Q 001541 843 SGSDLYYSTLNSEDGPFVVDFYY-HSHIEYRWGGE------GLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAF 915 (1057)
Q Consensus 843 nGa~I~~~~~~~~~~~~~~d~~~-~~~i~~~w~~e------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 915 (1057)
||.++..+.... ....+..+ .......|... .+.+...+.++...+.| .+++++
T Consensus 164 HG~e~~~p~~g~---~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K----------------~~slav 224 (354)
T PLN02151 164 HGMDIKGPEQGS---KYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENN----------------KFCASV 224 (354)
T ss_pred CCceeecCCCCc---cccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEec----------------CcEEEE
Confidence 999998653110 00000000 00111122211 11222234455555444 688999
Q ss_pred EecCCCCCccHHHHHHHHHHhcCcE-EEEEeeCCeeEEEecC-CCCHHHHHHHHHHHhCCCc--ccEEEEecCCCCCCcc
Q 001541 916 SVQKPGMTPPVKELRKVLRIQALRC-HVIYCQNGSRINVIPV-LASRSQALRYLYLRWGVEL--SKMVVFVGESGDTDYE 991 (1057)
Q Consensus 916 ~~~~~~~~~~~~el~~~l~~~~~~~-~v~~s~~~~~lEI~p~-gasKg~AL~~L~~~lgI~~--e~viaf~GD~~n~D~~ 991 (1057)
|++..... ...++...+....... .+...++.+.+||.|. +++||.|+++|++.++..- ..+++|+||+-+ | +
T Consensus 225 HYR~a~~~-~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~T-D-E 301 (354)
T PLN02151 225 HFRCVEEN-KWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRT-D-E 301 (354)
T ss_pred EeCCCChH-HHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCc-H-H
Confidence 99764421 1233444433211111 1233455569999995 9999999999999988763 246778999888 9 9
Q ss_pred ccccCc-----ceEEEeCC
Q 001541 992 GLLGGV-----HKTVILKG 1005 (1057)
Q Consensus 992 eML~~a-----g~gVAMgN 1005 (1057)
+||+.+ |.||.+|.
T Consensus 302 DaF~~L~~~~~G~gI~Vg~ 320 (354)
T PLN02151 302 DAFKILRDKKQGLGILVSK 320 (354)
T ss_pred HHHHHHhhcCCCccEEecc
Confidence 999864 56677763
No 130
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=99.57 E-value=7.6e-15 Score=159.51 Aligned_cols=191 Identities=13% Similarity=0.190 Sum_probs=111.3
Q ss_pred EEEecCCCC--------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEe
Q 001541 778 VISVDCDST--------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYY 849 (1057)
Q Consensus 778 ~~DiDGTL~--------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~ 849 (1057)
|+|+||||. ..+++.++++|++|.+. +++.|+|.|||+...+..+..-.++ .++++||+++..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~---~~~~v~IvSGR~~~~~~~~~~~~~i------~l~gehG~e~~~ 71 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAAD---PNNTVAIVSGRSLDDLERFGGIPNI------GLAGEHGAEIRR 71 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHH---SE--EEEE-SS-HHHHHHH-S-SS-------EEEEGGGTEEEE
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhcc---CCCEEEEEEeCCHHHhHHhcCCCCc------eEEEEeeEEecc
Confidence 689999993 46788999999999998 6778999999999996555543334 699999999998
Q ss_pred ccCCCCCCCccccccch---hhcccccchh---hHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCCCC
Q 001541 850 STLNSEDGPFVVDFYYH---SHIEYRWGGE---GLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMT 923 (1057)
Q Consensus 850 ~~~~~~~~~~~~d~~~~---~~i~~~w~~e---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 923 (1057)
++.. .|. ......|... .++.+..+++++..+.| .++++||++.....
T Consensus 72 ~~~~----------~~~~~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K----------------~~sv~~Hyr~~~~~ 125 (235)
T PF02358_consen 72 PGGS----------EWTNLPADEDLEWKDEVREILEYFAERTPGSFIEDK----------------EFSVAFHYRNAPPE 125 (235)
T ss_dssp TTE-----------EEE-TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEE----------------TTEEEEE-TTS-ST
T ss_pred Cccc----------cccccccccchHHHHHHHHHHHHHHhhccCcEEEEC----------------CeEEEEEecCCCcc
Confidence 7531 111 1112223322 23344455666666555 67889998765432
Q ss_pred ---ccHHHHHHHHHHh---cCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCC--cccEEEEecCCCCCCcccccc
Q 001541 924 ---PPVKELRKVLRIQ---ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVE--LSKMVVFVGESGDTDYEGLLG 995 (1057)
Q Consensus 924 ---~~~~el~~~l~~~---~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~--~e~viaf~GD~~n~D~~eML~ 995 (1057)
....++.+.+... ...++++.. ...+||.|.+++||.|+++|+++++.. ..++++|+||+-. | ++||+
T Consensus 126 ~~~~~~~~l~~~l~~~~~~~~~~~v~~g--~~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~t-D-E~~f~ 201 (235)
T PF02358_consen 126 FGEAQARELAEQLREILASHPGLEVVPG--KKVVEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRT-D-EDAFR 201 (235)
T ss_dssp ----THHHHHHHHHHHHHHH-T-EEEE---SSEEEEE-TT--HHHHHHHHHTTS---------EEEEESSHH-H-HHHHH
T ss_pred hhhhHHHHHHHHHHHHHHhCCCEEEEEC--CCEEEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCC-C-HHHHH
Confidence 2345555555532 124554433 348999999999999999999998764 1235555788777 8 99998
Q ss_pred Cc------ceEEEeCCCc
Q 001541 996 GV------HKTVILKGIC 1007 (1057)
Q Consensus 996 ~a------g~gVAMgNa~ 1007 (1057)
.+ |.+|.++...
T Consensus 202 ~~~~~~~~~~~i~V~~~~ 219 (235)
T PF02358_consen 202 ALRELEEGGFGIKVGSVS 219 (235)
T ss_dssp TTTTS----EEEEES---
T ss_pred HHHhcccCCCCeEEEeec
Confidence 74 5678888654
No 131
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.56 E-value=9.6e-14 Score=166.15 Aligned_cols=167 Identities=12% Similarity=0.159 Sum_probs=142.9
Q ss_pred cEEEEEe--CCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCC---------
Q 001541 476 PVILALA--RPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY--------- 543 (1057)
Q Consensus 476 ~~Il~vG--Rl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~--------- 543 (1057)
..+++++ |+ +.|.++.+|+|+..+.. ..|++.| +.|-+.+ . ++...++++++++++.
T Consensus 320 ~~~I~v~idrL-~ek~~~~~I~av~~~~~--~~p~~~L~~~gy~~~-~-------~~~~~l~~~i~~~~~~~~~~~~~~~ 388 (519)
T TIGR03713 320 ETEIGFWIDGL-SDEELQQILQQLLQYIL--KNPDYELKILTYNND-N-------DITQLLEDILEQINEEYNQDKNFFS 388 (519)
T ss_pred ceEEEEEcCCC-ChHHHHHHHHHHHHHHh--hCCCeEEEEEEecCc-h-------hHHHHHHHHHHHHHhhhchhhhccc
Confidence 4566666 99 99999999999999975 4455665 4666543 1 1245566666666555
Q ss_pred --------------------CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCch
Q 001541 544 --------------------GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPV 603 (1057)
Q Consensus 544 --------------------~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~ 603 (1057)
.+|.|.|.++..++...|..| .++|.+|..|+|+ +.+||+++|+|+| +-|+.
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~a----rl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~ 460 (519)
T TIGR03713 389 LSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKL----RLIIDLSKEPDLY-TQISGISAGIPQI---NKVET 460 (519)
T ss_pred cchhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhh----eEEEECCCCCChH-HHHHHHHcCCCee---ecCCc
Confidence 689999998777999999999 8999999999999 9999999999999 66778
Q ss_pred hhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Q 001541 604 DIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSR 663 (1057)
Q Consensus 604 eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~ 663 (1057)
++|.++.||++| +|..+|+++|..+|.+++.|+++...+.+.+++||-+.+.+++.++
T Consensus 461 ~~V~d~~NG~li--~d~~~l~~al~~~L~~~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 461 DYVEHNKNGYII--DDISELLKALDYYLDNLKNWNYSLAYSIKLIDDYSSENIIERLNEL 518 (519)
T ss_pred eeeEcCCCcEEe--CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHhh
Confidence 999999999999 4999999999999999999999999999999999999999988765
No 132
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=99.55 E-value=1.6e-12 Score=159.94 Aligned_cols=331 Identities=17% Similarity=0.224 Sum_probs=219.4
Q ss_pred CcceEEEEcCCCchHHHH-----HHHhc----------CCCCEEEEecCCchhh---HH-HHHHh--------hhcchHH
Q 001541 305 VWPVAIHGHYADAGDSAA-----LLSGA----------LNVPMLFTGHSLGRDK---LE-QLLKQ--------ARLSRDE 357 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~-----~l~~~----------~~iP~V~t~H~l~~~~---~~-~l~~~--------g~~~~~~ 357 (1057)
..|||||+|.+.++.+.. ++... .+..+|||.|++.+.- +. .++.. -.++...
T Consensus 247 ~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~lgl~~~~ 326 (778)
T cd04299 247 IKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARELGLSRDR 326 (778)
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHcCCCHHH
Confidence 469999999998888777 44321 1467899999985432 11 11100 0011111
Q ss_pred HHHHHHHH-----HHHHHHHHHhhcCCEEEecCHHH---HHHHHh-hhCCCChHHHHHHHHhHhccccccCCCCCcEEEe
Q 001541 358 INATYKIM-----RRIEAEELSLDASEIVITSTRQE---IEEQWR-LYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 428 (1057)
Q Consensus 358 ~~~~yk~~-----~ri~~E~~~l~~ad~Vi~~S~~~---~~~~~~-~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VI 428 (1057)
+....... ..+..-..++..|+.|.++|+-. ..+++. ++.++.. ...++.-|
T Consensus 327 ~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~~~~g~p~-------------------~~~~i~~I 387 (778)
T cd04299 327 FLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAGLWPGFPV-------------------EEVPIGHV 387 (778)
T ss_pred HhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhhhhccCCc-------------------ccCceece
Confidence 11100000 12334467899999999999865 333332 2333221 11268899
Q ss_pred CCCCCCCCcC-CCCCCCCCCCCCCC---------------CCCCCCCCchHH-------HHHhhh---------------
Q 001541 429 PPGMEFHHIV-PQDGDMDGETEGNE---------------DNPASPDPPIWS-------EIMRFF--------------- 470 (1057)
Q Consensus 429 pnGiD~~~f~-p~~~~~~~~~~~~~---------------~~~~~~~~~~~~-------~~~~~~--------------- 470 (1057)
-|||+...+. |.-.. .+.+.. ....-.+...|. .+.++.
T Consensus 388 TNGVh~~~W~~P~~~~---l~~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~ 464 (778)
T cd04299 388 TNGVHVPTWVAPEMRE---LYDRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASA 464 (778)
T ss_pred eCCcchhhhcCHHHHH---HHHHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCch
Confidence 9999998877 32110 000000 000001111221 111111
Q ss_pred ---------CCCCCcEEEEEeCCCCCCCHHHHHHHHHhccccc--CCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHH
Q 001541 471 ---------TNPRKPVILALARPDPKKNITTLVKAFGECRPLR--ELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLID 538 (1057)
Q Consensus 471 ---------~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~--~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~ 538 (1057)
..|+.++|+++.|+..+|+.+.+++.+.++.... +...+.+ +.|.+...++. ..++...|..+.+
T Consensus 465 ~~~~~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~~---gK~iIk~i~~~a~ 541 (778)
T cd04299 465 EEIGEADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADEP---GKELIQEIVEFSR 541 (778)
T ss_pred hhhhhcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccchH---HHHHHHHHHHHHh
Confidence 4567789999999999999999999988885421 1123554 66776543332 3457778888888
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeC
Q 001541 539 KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVD 616 (1057)
Q Consensus 539 ~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~--~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~ 616 (1057)
.....++|.|+...+-+--..+++.| ||+++||. .|++|+.-+=||.-|.+-+++..|...|.. ++.||+.+.
T Consensus 542 ~p~~~~kVvfle~Yd~~lA~~LvaG~----DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig 616 (778)
T cd04299 542 RPEFRGRIVFLEDYDMALARHLVQGV----DVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIG 616 (778)
T ss_pred CcCCCCcEEEEcCCCHHHHHHHHhhh----hhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeC
Confidence 66777789987776555556667777 99999999 999999999999999999999999999887 789999998
Q ss_pred C------------CCHHHHHHHHHHHHh----C------HHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 001541 617 P------------HDQQSVADALLKLVA----D------KQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 617 p------------~d~~~la~aI~~ll~----d------~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~ 665 (1057)
+ .|.++|.+.|.+.+- + |..|.++.+++++.+ ..|||.+++++|.+.+-
T Consensus 617 ~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 617 DGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred CCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 7 567788888865443 2 778999999999998 69999999999998876
No 133
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.50 E-value=1.7e-12 Score=151.55 Aligned_cols=328 Identities=18% Similarity=0.215 Sum_probs=184.2
Q ss_pred CcceEEEEcCCCchHHHHHHHhc-CCCCEEEEecCCchhhHHHHHHhh-----hc---chHHHHHHHHHHHHHHHHHHHh
Q 001541 305 VWPVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQA-----RL---SRDEINATYKIMRRIEAEELSL 375 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g-----~~---~~~~~~~~yk~~~ri~~E~~~l 375 (1057)
...-|.|+|-|.+|....++.+. ..+..|||.|....... +...+ .+ .....-..+.+..+...|+.+.
T Consensus 142 ~~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~--l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA 219 (633)
T PF05693_consen 142 KPKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRY--LAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAA 219 (633)
T ss_dssp SEEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHH--HTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHH
T ss_pred CCcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhhH--hhcCCCcHHHHhhccCccccccCccchHHHHHHHHHH
Confidence 34678899999888777666543 46788999997633221 11111 01 1122333455677778899999
Q ss_pred hcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCC
Q 001541 376 DASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNP 455 (1057)
Q Consensus 376 ~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~ 455 (1057)
..||++.++|+-...+-..+.+. .+ =.|+|||++...|.... ++.+..
T Consensus 220 ~~AdvFTTVSeITa~Ea~~LL~r----------------------~p--DvV~pNGl~v~~~~~~~--------efqnl~ 267 (633)
T PF05693_consen 220 HYADVFTTVSEITAKEAEHLLKR----------------------KP--DVVTPNGLNVDKFPALH--------EFQNLH 267 (633)
T ss_dssp HHSSEEEESSHHHHHHHHHHHSS--------------------------SEE----B-GGGTSSTT--------HHHHHH
T ss_pred HhcCeeeehhhhHHHHHHHHhCC----------------------CC--CEEcCCCccccccccch--------HHHHHH
Confidence 99999999998666665444332 11 15899999998776321 000000
Q ss_pred CCCCCchHHHHHhhhCC-----CC-CcEEEEEeCCCC-CCCHHHHHHHHHhcccc----cCCCcEE-EEE----------
Q 001541 456 ASPDPPIWSEIMRFFTN-----PR-KPVILALARPDP-KKNITTLVKAFGECRPL----RELANLT-LIM---------- 513 (1057)
Q Consensus 456 ~~~~~~~~~~~~~~~~~-----~~-~~~Il~vGRl~~-~Kgi~~Ll~A~~~l~~~----~~~~~l~-LIv---------- 513 (1057)
+.....+....+..+.. ++ ..+|...||... .||++.+|+|+.++... .....++ +|+
T Consensus 268 ~~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~v 347 (633)
T PF05693_consen 268 AKAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNV 347 (633)
T ss_dssp HHHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-H
T ss_pred HHHHHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCH
Confidence 01122333333333211 23 456777889985 69999999999998531 1112222 332
Q ss_pred ---------------------------------ecCCCCcccchhhH--------------------------HHHHHHH
Q 001541 514 ---------------------------------GNRDGIDEMSSTSA--------------------------SVLLSVL 534 (1057)
Q Consensus 514 ---------------------------------G~~~~~~~~~~~~~--------------------------~~~~~l~ 534 (1057)
|.-|+.+++-...+ .--+.|.
T Consensus 348 e~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpIL 427 (633)
T PF05693_consen 348 ESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPIL 427 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHH
Confidence 11111111100000 0012233
Q ss_pred HHHHHcCCCC------CEEeCC-CCC------CCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC
Q 001541 535 KLIDKYDLYG------QVAYPK-HHK------QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG 601 (1057)
Q Consensus 535 ~l~~~~~l~~------~V~f~g-~v~------~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg 601 (1057)
..+.+++|.+ +|.|++ +++ .-+..++++.| |+.|+||.+||+|.|.+|+.|+|+|.|+|+..|
T Consensus 428 n~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~Gc----dLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsG 503 (633)
T PF05693_consen 428 NMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGC----DLGVFPSYYEPWGYTPLECTAFGVPSITTNLSG 503 (633)
T ss_dssp HHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHS----SEEEE--SSBSS-HHHHHHHHTT--EEEETTBH
T ss_pred HHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccC----ceeeeccccccccCChHHHhhcCCceeeccchh
Confidence 3344444422 234432 332 23789999999 999999999999999999999999999999988
Q ss_pred chhhhhc-----CCceEEe-CC--CC----HHHHHHHHHHHHh-CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHccc
Q 001541 602 PVDIHRV-----LDNGLLV-DP--HD----QQSVADALLKLVA-DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCK 668 (1057)
Q Consensus 602 ~~eiv~~-----~~~Gllv-~p--~d----~~~la~aI~~ll~-d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~ 668 (1057)
+...+.. ...|+.| +- .+ .++|++.|.+... ++..+..+++++.+..+.++|.....-|.+.|...+
T Consensus 504 FG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~AL 583 (633)
T PF05693_consen 504 FGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLAL 583 (633)
T ss_dssp HHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 7766553 2356655 32 23 3556666666655 566778888888877799999999999999987665
Q ss_pred CC
Q 001541 669 PR 670 (1057)
Q Consensus 669 ~~ 670 (1057)
.+
T Consensus 584 ~~ 585 (633)
T PF05693_consen 584 RR 585 (633)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 134
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.42 E-value=1.8e-13 Score=134.98 Aligned_cols=131 Identities=31% Similarity=0.432 Sum_probs=93.4
Q ss_pred CcEEEEEeCCCCCCCHHHHHH-HHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCC
Q 001541 475 KPVILALARPDPKKNITTLVK-AFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHH 552 (1057)
Q Consensus 475 ~~~Il~vGRl~~~Kgi~~Ll~-A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v 552 (1057)
-++|+++|++.+.|+++.+++ |+.++.+.. |++.+ |+|++++ + +.++ ..++|.|.|++
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~--p~~~l~i~G~~~~--~-----------l~~~-----~~~~v~~~g~~ 61 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKH--PDIELIIIGNGPD--E-----------LKRL-----RRPNVRFHGFV 61 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHS--TTEEEEEECESS---H-----------HCCH-----HHCTEEEE-S-
T ss_pred cccccccccccccccccchhhhHHHHHHHHC--cCEEEEEEeCCHH--H-----------HHHh-----cCCCEEEcCCH
Confidence 367999999999999999999 999997544 46665 7788654 1 1122 23589999998
Q ss_pred CCCcHHHHHHHhhcCCcEEEEcCC-CCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHH
Q 001541 553 KQSDVPEIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLV 631 (1057)
Q Consensus 553 ~~~dl~~ly~~Aa~~~dv~v~ps~-~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll 631 (1057)
+++.++|+.| |++|+|+. .++++++++|||++|+|||+++. +..+++.....|+++ ++|+++++++|.+++
T Consensus 62 --~e~~~~l~~~----dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 62 --EELPEILAAA----DVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp --HHHHHHHHC-----SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred --HHHHHHHHhC----CEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 5899999999 99999984 67899999999999999999999 566777656778888 889999999999998
Q ss_pred hC
Q 001541 632 AD 633 (1057)
Q Consensus 632 ~d 633 (1057)
+|
T Consensus 134 ~d 135 (135)
T PF13692_consen 134 ND 135 (135)
T ss_dssp H-
T ss_pred cC
Confidence 75
No 135
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.39 E-value=4.1e-11 Score=139.82 Aligned_cols=251 Identities=16% Similarity=0.012 Sum_probs=149.9
Q ss_pred CcceEEEEcCC-CchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEe
Q 001541 305 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 383 (1057)
Q Consensus 305 ~~pDvIh~h~~-~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~ 383 (1057)
.+||+|+++.. ......+..++.+|+|+|+.+. ...+.+++ + . -+...+.+|.|++
T Consensus 88 ~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~-P~~waw~~----~---------~---------~r~l~~~~d~v~~ 144 (385)
T TIGR00215 88 AKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYIS-PQVWAWRK----W---------R---------AKKIEKATDFLLA 144 (385)
T ss_pred cCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeC-CcHhhcCc----c---------h---------HHHHHHHHhHhhc
Confidence 67999999875 2233344467778999986552 11111000 0 0 1234567899999
Q ss_pred cCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchH
Q 001541 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 463 (1057)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1057)
+++.+.+.+.. + |+ ++.++.|++-..... .. +...
T Consensus 145 ~~~~e~~~~~~-~-----------------g~--------~~~~vGnPv~~~~~~-~~------------------~~~~ 179 (385)
T TIGR00215 145 ILPFEKAFYQK-K-----------------NV--------PCRFVGHPLLDAIPL-YK------------------PDRK 179 (385)
T ss_pred cCCCcHHHHHh-c-----------------CC--------CEEEECCchhhhccc-cC------------------CCHH
Confidence 99876554321 1 11 556777776322110 00 0011
Q ss_pred HHHHhhhCCCCCcEEEEEe--CCCC-CCCHHHHHHHHHhcccccCCCcEEE-E-EecCCCCcccchhhHHHHHHHHHHHH
Q 001541 464 SEIMRFFTNPRKPVILALA--RPDP-KKNITTLVKAFGECRPLRELANLTL-I-MGNRDGIDEMSSTSASVLLSVLKLID 538 (1057)
Q Consensus 464 ~~~~~~~~~~~~~~Il~vG--Rl~~-~Kgi~~Ll~A~~~l~~~~~~~~l~L-I-vG~~~~~~~~~~~~~~~~~~l~~l~~ 538 (1057)
..+.++..++++++|+.++ |..+ .|++..+++|+..+.+. .+++.+ + ++++.. ...+.++..
T Consensus 180 ~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~--~p~~~~vi~~~~~~~-----------~~~~~~~~~ 246 (385)
T TIGR00215 180 SAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQ--EPDLRRVLPVVNFKR-----------RLQFEQIKA 246 (385)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHh--CCCeEEEEEeCCchh-----------HHHHHHHHH
Confidence 2233455566788877663 7766 78999999999998643 345543 3 333221 233444555
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcC-CCCchh-------------
Q 001541 539 KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK-NGGPVD------------- 604 (1057)
Q Consensus 539 ~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~-~Gg~~e------------- 604 (1057)
.+++...|.+.+. +...+|++| |++|.+| |.+.+|+|++|+|+|..- ..-...
T Consensus 247 ~~~~~~~v~~~~~----~~~~~l~aA----Dl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~ 313 (385)
T TIGR00215 247 EYGPDLQLHLIDG----DARKAMFAA----DAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYIS 313 (385)
T ss_pred HhCCCCcEEEECc----hHHHHHHhC----CEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeee
Confidence 5655556655543 677899999 9999999 777789999999988872 211111
Q ss_pred ---hhhcCCceE-Ee-CCCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHhh
Q 001541 605 ---IHRVLDNGL-LV-DPHDQQSVADALLKLVADK----QLWARCRQNGLKNIH 649 (1057)
Q Consensus 605 ---iv~~~~~Gl-lv-~p~d~~~la~aI~~ll~d~----~~~~~~~~~~~~~v~ 649 (1057)
++.+..-.. ++ +.-+++.|++++.+++.|+ +.++++.+.-.+..+
T Consensus 314 ~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 367 (385)
T TIGR00215 314 LPNILANRLLVPELLQEECTPHPLAIALLLLLENGLKAYKEMHRERQFFEELRQ 367 (385)
T ss_pred ccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHH
Confidence 121111111 11 2236889999999999999 877777666555443
No 136
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.32 E-value=4.8e-12 Score=127.19 Aligned_cols=160 Identities=26% Similarity=0.312 Sum_probs=87.5
Q ss_pred CcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCccccccc
Q 001541 191 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAK 270 (1057)
Q Consensus 191 GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l~k 270 (1057)
||+++|+.+|+++|++.| |+|+|+|+....... .....++.++++|..+.. .
T Consensus 1 GG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~-~--- 52 (160)
T PF13579_consen 1 GGIERYVRELARALAARG--HEVTVVTPQPDPEDD----------------------EEEEDGVRVHRLPLPRRP-W--- 52 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT---EEEEEEE---GGG-----------------------SEEETTEEEEEE--S-SS-S---
T ss_pred CCHHHHHHHHHHHHHHCC--CEEEEEecCCCCccc----------------------ccccCCceEEeccCCccc-h---
Confidence 899999999999999999 999999976422110 011258999999876542 1
Q ss_pred ccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHh
Q 001541 271 ELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQ 350 (1057)
Q Consensus 271 ~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~ 350 (1057)
.+.. ..+...+..+ +. ....+||+||+|++.++.++.++++..++|+|++.|+.......
T Consensus 53 --~~~~-~~~~~~~~~~-------l~-----~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~----- 112 (160)
T PF13579_consen 53 --PLRL-LRFLRRLRRL-------LA-----ARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRRGS----- 112 (160)
T ss_dssp --GGGH-CCHHHHHHHH-------CH-----HCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T----------
T ss_pred --hhhh-HHHHHHHHHH-------Hh-----hhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhhcc-----
Confidence 0000 1111111111 10 01267999999997666667666657799999999986432210
Q ss_pred hhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCC
Q 001541 351 ARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPP 430 (1057)
Q Consensus 351 g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpn 430 (1057)
.....+.++ .|+.+++.||.|+++|+...+.+.. +. .+.+++.||||
T Consensus 113 --------~~~~~~~~~--~~~~~~~~ad~vi~~S~~~~~~l~~-~g----------------------~~~~ri~vipn 159 (160)
T PF13579_consen 113 --------RWKRRLYRW--LERRLLRRADRVIVVSEAMRRYLRR-YG----------------------VPPDRIHVIPN 159 (160)
T ss_dssp ---------HHHHHHHH--HHHHHHHH-SEEEESSHHHHHHHHH-H-------------------------GGGEEE---
T ss_pred --------chhhHHHHH--HHHHHHhcCCEEEECCHHHHHHHHH-hC----------------------CCCCcEEEeCc
Confidence 001112233 3678999999999999998887665 33 22339999999
Q ss_pred C
Q 001541 431 G 431 (1057)
Q Consensus 431 G 431 (1057)
|
T Consensus 160 G 160 (160)
T PF13579_consen 160 G 160 (160)
T ss_dssp -
T ss_pred C
Confidence 8
No 137
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.31 E-value=1.9e-09 Score=124.30 Aligned_cols=308 Identities=10% Similarity=0.082 Sum_probs=177.9
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCccccc
Q 001541 189 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYI 268 (1057)
Q Consensus 189 d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l 268 (1057)
-|||+..-...+|++|.+.| |+|.++++... .. .+ .....|+.++.++..+.
T Consensus 10 GTGGHi~Pala~a~~l~~~g--~~v~~vg~~~~---~e------~~-------------l~~~~g~~~~~~~~~~l---- 61 (352)
T PRK12446 10 GSAGHVTPNLAIIPYLKEDN--WDISYIGSHQG---IE------KT-------------IIEKENIPYYSISSGKL---- 61 (352)
T ss_pred CcHHHHHHHHHHHHHHHhCC--CEEEEEECCCc---cc------cc-------------cCcccCCcEEEEeccCc----
Confidence 39999999999999999988 99999986531 10 00 11112566666654332
Q ss_pred ccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHH
Q 001541 269 AKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLL 348 (1057)
Q Consensus 269 ~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~ 348 (1057)
++...|..+ .+...++..+.+..+.+++ .+||+||++...++..+.+.++.+++|+++.-.+..+..
T Consensus 62 ~~~~~~~~~-~~~~~~~~~~~~~~~i~~~-------~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~g~----- 128 (352)
T PRK12446 62 RRYFDLKNI-KDPFLVMKGVMDAYVRIRK-------LKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTPGL----- 128 (352)
T ss_pred CCCchHHHH-HHHHHHHHHHHHHHHHHHh-------cCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCccH-----
Confidence 111111111 1111222223333333443 789999999877777778888899999987666543211
Q ss_pred HhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEe
Q 001541 349 KQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 428 (1057)
Q Consensus 349 ~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VI 428 (1057)
.. +...+.|+.|+++-+.... .+++ .++.++
T Consensus 129 ----------------~n-----r~~~~~a~~v~~~f~~~~~-------~~~~---------------------~k~~~t 159 (352)
T PRK12446 129 ----------------AN-----KIALRFASKIFVTFEEAAK-------HLPK---------------------EKVIYT 159 (352)
T ss_pred ----------------HH-----HHHHHhhCEEEEEccchhh-------hCCC---------------------CCeEEE
Confidence 11 1246678888776432111 1111 267777
Q ss_pred CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHH-HHHHHhcccccCCC
Q 001541 429 PPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTL-VKAFGECRPLRELA 507 (1057)
Q Consensus 429 pnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~L-l~A~~~l~~~~~~~ 507 (1057)
.|++..+..... .......+...+++++||.+|.=--.+.+..+ .+++..+. ...
T Consensus 160 G~Pvr~~~~~~~---------------------~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~---~~~ 215 (352)
T PRK12446 160 GSPVREEVLKGN---------------------REKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELL---LKY 215 (352)
T ss_pred CCcCCccccccc---------------------chHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhc---cCc
Confidence 777755332110 00112233445678888888764445555433 33444442 223
Q ss_pred cEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHH
Q 001541 508 NLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEA 587 (1057)
Q Consensus 508 ~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEA 587 (1057)
+++.++|..+ . ++... .+ ..+...+++ .++++++|+.| |++|.- +-+.++.|+
T Consensus 216 ~vv~~~G~~~-~-----------~~~~~---~~---~~~~~~~f~-~~~m~~~~~~a----dlvIsr----~G~~t~~E~ 268 (352)
T PRK12446 216 QIVHLCGKGN-L-----------DDSLQ---NK---EGYRQFEYV-HGELPDILAIT----DFVISR----AGSNAIFEF 268 (352)
T ss_pred EEEEEeCCch-H-----------HHHHh---hc---CCcEEecch-hhhHHHHHHhC----CEEEEC----CChhHHHHH
Confidence 4444666542 1 11111 11 122333542 25899999999 988854 457899999
Q ss_pred HHcCCcEEEcCCC-----C----chhhhhcCCceEEeCCC--CHHHHHHHHHHHHhCHHHH
Q 001541 588 AAHGLPIVATKNG-----G----PVDIHRVLDNGLLVDPH--DQQSVADALLKLVADKQLW 637 (1057)
Q Consensus 588 mA~G~PVVat~~G-----g----~~eiv~~~~~Gllv~p~--d~~~la~aI~~ll~d~~~~ 637 (1057)
+++|+|+|.-... + ..+.+...+.|..+... +++.+.++|.+++.|++.+
T Consensus 269 ~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~~~ 329 (352)
T PRK12446 269 LTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHNNEKY 329 (352)
T ss_pred HHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCHHHH
Confidence 9999999987542 1 11233444556666433 5789999999999988654
No 138
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.30 E-value=3.8e-09 Score=120.84 Aligned_cols=334 Identities=15% Similarity=0.121 Sum_probs=203.6
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeee-EEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCcccc
Q 001541 189 DTGGQVKYVVELARALGSMPGVYR-VDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKY 267 (1057)
Q Consensus 189 d~GG~~~~v~~LA~aLa~~Ggv~~-V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~ 267 (1057)
-|||+..-...|+++|.++| ++ |.++.... .. . .......++.++.++.++..++
T Consensus 9 GTGGHv~pAlAl~~~l~~~g--~~~v~~~~~~~---~~-------e------------~~l~~~~~~~~~~I~~~~~~~~ 64 (357)
T COG0707 9 GTGGHVFPALALAEELAKRG--WEQVIVLGTGD---GL-------E------------AFLVKQYGIEFELIPSGGLRRK 64 (357)
T ss_pred CCccchhHHHHHHHHHHhhC--ccEEEEecccc---cc-------e------------eeeccccCceEEEEeccccccc
Confidence 49999999999999999999 85 55552211 00 0 0111123778888887654222
Q ss_pred cccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHH
Q 001541 268 IAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQL 347 (1057)
Q Consensus 268 l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l 347 (1057)
..+..+... -..+.-+.+..+.|++ .+||+|.+........+.+.+..+++|+++...+.-....
T Consensus 65 ----~~~~~~~~~-~~~~~~~~~a~~il~~-------~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~G~a--- 129 (357)
T COG0707 65 ----GSLKLLKAP-FKLLKGVLQARKILKK-------LKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVPGLA--- 129 (357)
T ss_pred ----CcHHHHHHH-HHHHHHHHHHHHHHHH-------cCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCcchh---
Confidence 222211111 2333344445555555 7899999988777777778888899999999888755431
Q ss_pred HHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEE
Q 001541 348 LKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAI 427 (1057)
Q Consensus 348 ~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~V 427 (1057)
++ +..+.|+.|.+.-.. ... +.+..++.+
T Consensus 130 --------------nk---------~~~~~a~~V~~~f~~-~~~---------------------------~~~~~~~~~ 158 (357)
T COG0707 130 --------------NK---------ILSKFAKKVASAFPK-LEA---------------------------GVKPENVVV 158 (357)
T ss_pred --------------HH---------HhHHhhceeeecccc-ccc---------------------------cCCCCceEE
Confidence 11 234556666665432 110 111125777
Q ss_pred eCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC
Q 001541 428 IPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA 507 (1057)
Q Consensus 428 IpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~ 507 (1057)
..+++..+.+. .... ..++....++++|+.+|.=--.+.+..++....... .+..
T Consensus 159 tG~Pvr~~~~~-~~~~----------------------~~~~~~~~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l--~~~~ 213 (357)
T COG0707 159 TGIPVRPEFEE-LPAA----------------------EVRKDGRLDKKTILVTGGSQGAKALNDLVPEALAKL--ANRI 213 (357)
T ss_pred ecCcccHHhhc-cchh----------------------hhhhhccCCCcEEEEECCcchhHHHHHHHHHHHHHh--hhCe
Confidence 87777665443 1100 011111227888888886433333444333333221 1122
Q ss_pred cEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHH
Q 001541 508 NLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEA 587 (1057)
Q Consensus 508 ~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEA 587 (1057)
.++.+.|... ..++......++. +...++ .++++++|++| |++|.= +-++|+.|.
T Consensus 214 ~v~~~~G~~~------------~~~~~~~~~~~~~---~~v~~f--~~dm~~~~~~A----DLvIsR----aGa~Ti~E~ 268 (357)
T COG0707 214 QVIHQTGKND------------LEELKSAYNELGV---VRVLPF--IDDMAALLAAA----DLVISR----AGALTIAEL 268 (357)
T ss_pred EEEEEcCcch------------HHHHHHHHhhcCc---EEEeeH--HhhHHHHHHhc----cEEEeC----CcccHHHHH
Confidence 3323444432 2344444454544 667777 57899999999 998854 357999999
Q ss_pred HHcCCcEEEcCCCCc--------hhhhhcCCceEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHH
Q 001541 588 AAHGLPIVATKNGGP--------VDIHRVLDNGLLVDPHD--QQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHC 657 (1057)
Q Consensus 588 mA~G~PVVat~~Gg~--------~eiv~~~~~Gllv~p~d--~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a 657 (1057)
+++|+|+|--..+.. ...+++.+.|++++..+ ++.+.+.|.+++.+|+..++|..++++....-.-+.++
T Consensus 269 ~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~~m~~~a~~~~~p~aa~~i~ 348 (357)
T COG0707 269 LALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSNPEKLKAMAENAKKLGKPDAAERIA 348 (357)
T ss_pred HHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 999999998764433 22344556777776555 88999999999999999999999988876555555555
Q ss_pred HHHHH
Q 001541 658 KTYLS 662 (1057)
Q Consensus 658 ~~~l~ 662 (1057)
...+.
T Consensus 349 ~~~~~ 353 (357)
T COG0707 349 DLLLA 353 (357)
T ss_pred HHHHH
Confidence 44443
No 139
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.29 E-value=2.1e-11 Score=124.66 Aligned_cols=169 Identities=19% Similarity=0.250 Sum_probs=86.5
Q ss_pred CCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCcccc
Q 001541 188 SDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKY 267 (1057)
Q Consensus 188 ~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~ 267 (1057)
+..||+++++.+|+++|+++| |+|++++....++... .........+....
T Consensus 9 ~~~GG~e~~~~~l~~~l~~~G--~~v~v~~~~~~~~~~~------------------------~~~~~~~~~~~~~~--- 59 (177)
T PF13439_consen 9 PNIGGAERVVLNLARALAKRG--HEVTVVSPGVKDPIEE------------------------ELVKIFVKIPYPIR--- 59 (177)
T ss_dssp TSSSHHHHHHHHHHHHHHHTT---EEEEEESS-TTS-SS------------------------TEEEE---TT-SST---
T ss_pred CCCChHHHHHHHHHHHHHHCC--CEEEEEEcCCCccchh------------------------hccceeeeeecccc---
Confidence 579999999999999999999 9999998764322110 00011111111110
Q ss_pred cccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHH
Q 001541 268 IAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQL 347 (1057)
Q Consensus 268 l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l 347 (1057)
.... ..+.....+.+.+.+ .+|||||+|.+.....+..... ++|+|+|.|+..... ..
T Consensus 60 ------~~~~-----~~~~~~~~~~~~i~~-------~~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~~--~~ 117 (177)
T PF13439_consen 60 ------KRFL-----RSFFFMRRLRRLIKK-------EKPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFER--RF 117 (177)
T ss_dssp ------SS-------HHHHHHHHHHHHHHH-------HT-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH--H--HT
T ss_pred ------cccc-----hhHHHHHHHHHHHHH-------cCCCeEEecccchhHHHHHhcc--CCCEEEEeCCCcccc--cc
Confidence 0011 111112223333333 4699999998744333333333 999999999976320 00
Q ss_pred HHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEE
Q 001541 348 LKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAI 427 (1057)
Q Consensus 348 ~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~V 427 (1057)
.. . ... ....+..+ .+...++.+|.+||+|+...+++.+ ++ .+..++.|
T Consensus 118 ~~-~--~~~---~~~~~~~~--~~~~~~~~~~~ii~vS~~~~~~l~~-~~----------------------~~~~ki~v 166 (177)
T PF13439_consen 118 LK-S--KLS---PYSYLNFR--IERKLYKKADRIIAVSESTKDELIK-FG----------------------IPPEKIHV 166 (177)
T ss_dssp TT-T--SCC---CHHHHHHC--TTHHHHCCSSEEEESSHHHHHHHHH-HT------------------------SS-EEE
T ss_pred cc-c--ccc---hhhhhhhh--hhhhHHhcCCEEEEECHHHHHHHHH-hC----------------------CcccCCEE
Confidence 00 0 000 01111111 1334589999999999998888765 43 22248999
Q ss_pred eCCCCCCCCcC
Q 001541 428 IPPGMEFHHIV 438 (1057)
Q Consensus 428 IpnGiD~~~f~ 438 (1057)
||||||.+.|.
T Consensus 167 I~ngid~~~F~ 177 (177)
T PF13439_consen 167 IYNGIDTDRFR 177 (177)
T ss_dssp ----B-CCCH-
T ss_pred EECCccHHHcC
Confidence 99999999873
No 140
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=99.26 E-value=2.7e-11 Score=111.49 Aligned_cols=91 Identities=18% Similarity=0.333 Sum_probs=86.0
Q ss_pred EEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-
Q 001541 570 VFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI- 648 (1057)
Q Consensus 570 v~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v- 648 (1057)
++++|+..+++++.++|+||||+|||++..++..+++.++..++.++ |++++.++|..++++|+++++++++|++.+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~~~~~~~ia~~a~~~v~ 78 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLENPEERRRIAKNARERVL 78 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999999988999998 999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHH
Q 001541 649 HLFSWPEHCKTYLS 662 (1057)
Q Consensus 649 ~~fsw~~~a~~~l~ 662 (1057)
++|+|.+.++++++
T Consensus 79 ~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 79 KRHTWEHRAEQILE 92 (92)
T ss_pred HhCCHHHHHHHHHC
Confidence 59999999998863
No 141
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.24 E-value=1.9e-10 Score=117.03 Aligned_cols=252 Identities=14% Similarity=0.145 Sum_probs=149.1
Q ss_pred cceEEEEEecCCCCC--cchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEec
Q 001541 773 RKHIFVISVDCDSTT--GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 850 (1057)
Q Consensus 773 ~kkLi~~DiDGTL~~--~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~ 850 (1057)
..++||.|+||||.. --.+.....+..|+.. |+.||+||.-+..++..+-+.++++ +-.+|+.||+.||-+
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~~pA~pv~~el~d~----G~~Vi~~SSKT~aE~~~l~~~l~v~---~~p~iaEnG~aI~~p 78 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEWQPAAPVLLELKDA----GVPVILCSSKTRAEMLYLQKSLGVQ---GLPLIAENGAAIYLP 78 (274)
T ss_pred cceEEEEcccCcccCCCCCCCccchHHHHHHHc----CCeEEEeccchHHHHHHHHHhcCCC---CCceeecCCceEEec
Confidence 357999999999942 2334566778888886 9999999999999999999999995 356999999999987
Q ss_pred cCCCCCCCccccccchhhcccccchhhHHHHHHHhhhcccccccccc-cccccc--c---c----cccCcceEEEEecCC
Q 001541 851 TLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESG-EKVLTP--A---E----QLSTNYCYAFSVQKP 920 (1057)
Q Consensus 851 ~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~-~~~~~~--~---~----~~~~~~k~~~~~~~~ 920 (1057)
.++...........-..++.-...-+.+++.+..+...+.-..-.+. ...+.+ . + .....+..+..-++.
T Consensus 79 ~~~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rEyseti~~rs~ 158 (274)
T COG3769 79 KGWFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLREYSETIIWRSS 158 (274)
T ss_pred ccccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHHhhhheeeccc
Confidence 54421111100111112222222223334333333221110000000 000000 0 0 000111111221211
Q ss_pred CCCccHHHHHHHHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHh-CCCcccEEEEecCCCCCCccccccCcce
Q 001541 921 GMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRW-GVELSKMVVFVGESGDTDYEGLLGGVHK 999 (1057)
Q Consensus 921 ~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~l-gI~~e~viaf~GD~~n~D~~eML~~ag~ 999 (1057)
+ .....+...|...+ +.+.++..+.-|+-....||+|+..|.+-+ -.+...+.+..||+.| | .+||+...+
T Consensus 159 d--~~~~~~~~~L~e~g----lt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~~r~t~~~GDg~n-D-~Pl~ev~d~ 230 (274)
T COG3769 159 D--ERMAQFTARLNERG----LTFVHGARFWHVLDASAGKGQAANWLLETYRRLGGARTTLGLGDGPN-D-APLLEVMDY 230 (274)
T ss_pred c--hHHHHHHHHHHhcC----ceEEeccceEEEeccccCccHHHHHHHHHHHhcCceeEEEecCCCCC-c-ccHHHhhhh
Confidence 1 12233445555543 345666668899999999999999997754 3444554444999999 9 999999999
Q ss_pred EEEeCCCc-hhhhhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHHhC
Q 001541 1000 TVILKGIC-SSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 1053 (1057)
Q Consensus 1000 gVAMgNa~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~~g 1053 (1057)
.++++|-. +++ .++... |-+..++..-..+|..+.|++|.
T Consensus 231 AfiV~~lnre~~--~lv~~i------------~~vv~~~~~~~~~~~~e~~~~~~ 271 (274)
T COG3769 231 AFIVKGLNREGV--HLVSSI------------PAVVERIQREGPEGWREGLDHFF 271 (274)
T ss_pred heeecccchhhh--hccccc------------hhheeeccccCchHHHHHhhhhc
Confidence 99999776 221 122222 44555667778899999999874
No 142
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=99.09 E-value=9e-09 Score=120.88 Aligned_cols=192 Identities=15% Similarity=0.205 Sum_probs=138.7
Q ss_pred hcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCC
Q 001541 376 DASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNP 455 (1057)
Q Consensus 376 ~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~ 455 (1057)
.+.|.||++|+++.+.+...+... .++.+||-|+=.. +. ..
T Consensus 238 ~~~~~iIv~T~~q~~di~~r~~~~-----------------------~~~~~ip~g~i~~-~~-~~-------------- 278 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKELLDNE-----------------------YQEQISQLGYLYP-FK-KD-------------- 278 (438)
T ss_pred cccCeEEeCCHHHHHHHHHHhCcc-----------------------cCceEEEEEEEEe-ec-cc--------------
Confidence 678999999987777655444321 1567888876522 11 00
Q ss_pred CCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHH
Q 001541 456 ASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLK 535 (1057)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~ 535 (1057)
+...+-++.++. ...|++++++.+ ..|++++-+|-+.+. ..+|.+
T Consensus 279 ----------------~r~~~~~l~~t~-------s~~I~~i~~Lv~--~lPd~~f~Iga~te~----------s~kL~~ 323 (438)
T TIGR02919 279 ----------------NKYRKQALILTN-------SDQIEHLEEIVQ--ALPDYHFHIAALTEM----------SSKLMS 323 (438)
T ss_pred ----------------cCCcccEEEECC-------HHHHHHHHHHHH--hCCCcEEEEEecCcc----------cHHHHH
Confidence 122334555551 899999999974 456777644666541 245666
Q ss_pred HHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCC-CCchhhhhcCCceEE
Q 001541 536 LIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN-GGPVDIHRVLDNGLL 614 (1057)
Q Consensus 536 l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~-Gg~~eiv~~~~~Gll 614 (1057)
+ .++ .+.+.|+|.. ..++.++|..| |+++.++..|+|++++.||+.+|+|||+.+. -|+.+++.+ |.+
T Consensus 324 L-~~y--~nvvly~~~~-~~~l~~ly~~~----dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l 392 (438)
T TIGR02919 324 L-DKY--DNVKLYPNIT-TQKIQELYQTC----DIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENI 392 (438)
T ss_pred H-Hhc--CCcEEECCcC-hHHHHHHHHhc----cEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---Cce
Confidence 6 666 4567777765 45899999999 9999999999999999999999999999884 466677754 889
Q ss_pred eCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCC
Q 001541 615 VDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFS 652 (1057)
Q Consensus 615 v~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fs 652 (1057)
++++++++|+++|.++|++++.+++.-..-++.+..-+
T Consensus 393 ~~~~~~~~m~~~i~~lL~d~~~~~~~~~~q~~~a~~~~ 430 (438)
T TIGR02919 393 FEHNEVDQLISKLKDLLNDPNQFRELLEQQREHANDIS 430 (438)
T ss_pred ecCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999877765554444444333
No 143
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=99.04 E-value=8.7e-08 Score=112.19 Aligned_cols=165 Identities=19% Similarity=0.279 Sum_probs=104.5
Q ss_pred CCCcEEEEEe--C-CCCCCCHHHHHHHHHhcccccCCCcEEE--EEecCCCCcccchhhHHHHHHHHHHHHHcCCCC---
Q 001541 473 PRKPVILALA--R-PDPKKNITTLVKAFGECRPLRELANLTL--IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYG--- 544 (1057)
Q Consensus 473 ~~~~~Il~vG--R-l~~~Kgi~~Ll~A~~~l~~~~~~~~l~L--IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~--- 544 (1057)
++.++|+.++ | -...++++.+++++..+.+. +++.+ .+.+..+ ...+.+.....++..
T Consensus 203 ~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~---~~~~~v~~~~~~~~-----------~~~~~~~l~~~g~~~~~~ 268 (396)
T TIGR03492 203 TGRFRIALLPGSRPPEAYRNLKLLLRALEALPDS---QPFVFLAAIVPSLS-----------LEKLQAILEDLGWQLEGS 268 (396)
T ss_pred CCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhC---CCeEEEEEeCCCCC-----------HHHHHHHHHhcCceecCC
Confidence 3444544443 3 23457889999999999532 45544 3323332 233444444444431
Q ss_pred -----------CEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCch---hhhhc--
Q 001541 545 -----------QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPV---DIHRV-- 608 (1057)
Q Consensus 545 -----------~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~---eiv~~-- 608 (1057)
.+.+..+ ..++.++|+.| |++|..| |.+..|++++|+|+|.....+.. .+.+.
T Consensus 269 ~~~~~~~~~~~~~~v~~~--~~~~~~~l~~A----DlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~ 337 (396)
T TIGR03492 269 SEDQTSLFQKGTLEVLLG--RGAFAEILHWA----DLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQS 337 (396)
T ss_pred ccccchhhccCceEEEec--hHhHHHHHHhC----CEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhH
Confidence 2444333 36799999999 9999885 56669999999999998743331 22222
Q ss_pred --CCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHH
Q 001541 609 --LDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLS 662 (1057)
Q Consensus 609 --~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~ 662 (1057)
...++.+...+++.++++|.+++.|++.++++.+++++.. .....+.+++...+
T Consensus 338 ~l~g~~~~l~~~~~~~l~~~l~~ll~d~~~~~~~~~~~~~~lg~~~a~~~ia~~i~~ 394 (396)
T TIGR03492 338 RLLGGSVFLASKNPEQAAQVVRQLLADPELLERCRRNGQERMGPPGASARIAESILK 394 (396)
T ss_pred hhcCCEEecCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 1245555567889999999999999998888876555555 44555555554433
No 144
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.02 E-value=5.8e-08 Score=114.18 Aligned_cols=133 Identities=18% Similarity=0.093 Sum_probs=89.4
Q ss_pred HhhhCCCCCcEEEEEeCCCC---CCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCC
Q 001541 467 MRFFTNPRKPVILALARPDP---KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 543 (1057)
Q Consensus 467 ~~~~~~~~~~~Il~vGRl~~---~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~ 543 (1057)
..++.....+++++.|.... .+-...+++|+..+ ...+++.+|...... ..+.
T Consensus 232 ~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~g~~~~~~-------------------~~~~ 287 (401)
T cd03784 232 WLFLAAGRPPVYVGFGSMVVRDPEALARLDVEAVATL-----GQRAILSLGWGGLGA-------------------EDLP 287 (401)
T ss_pred HHHHhCCCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEccCccccc-------------------cCCC
Confidence 33443344567788888754 34455666777654 123334556543210 2345
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhhhcCCceEEeCCC-
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRVLDNGLLVDPH- 618 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv~~~~~Gllv~p~- 618 (1057)
++|.+.+++++ ..+|..| |++|.- |-..++.||+++|+|+|.....+ ....+...+.|+.+++.
T Consensus 288 ~~v~~~~~~p~---~~ll~~~----d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~ 356 (401)
T cd03784 288 DNVRVVDFVPH---DWLLPRC----AAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRE 356 (401)
T ss_pred CceEEeCCCCH---HHHhhhh----heeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCccc
Confidence 68999999764 4678889 999833 44588999999999999987665 23445556678777665
Q ss_pred -CHHHHHHHHHHHHhCH
Q 001541 619 -DQQSVADALLKLVADK 634 (1057)
Q Consensus 619 -d~~~la~aI~~ll~d~ 634 (1057)
+.++++++|.++++++
T Consensus 357 ~~~~~l~~al~~~l~~~ 373 (401)
T cd03784 357 LTAERLAAALRRLLDPP 373 (401)
T ss_pred CCHHHHHHHHHHHhCHH
Confidence 6899999999999854
No 145
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=98.99 E-value=5e-08 Score=100.55 Aligned_cols=180 Identities=17% Similarity=0.122 Sum_probs=114.2
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcccc
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
+|++|...|. ++..||.+++|.+|+..|.+.| ++|+|+++....+..
T Consensus 3 kIaIiGtrGI----------Pa~YGGfET~ve~L~~~l~~~g--~~v~Vyc~~~~~~~~--------------------- 49 (185)
T PF09314_consen 3 KIAIIGTRGI----------PARYGGFETFVEELAPRLVSKG--IDVTVYCRSDYYPYK--------------------- 49 (185)
T ss_pred eEEEEeCCCC----------CcccCcHHHHHHHHHHHHhcCC--ceEEEEEccCCCCCC---------------------
Confidence 7999998887 3568999999999999999999 999999986432211
Q ss_pred ccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCch-HHHHHHH
Q 001541 247 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAG-DSAALLS 325 (1057)
Q Consensus 247 ~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~-~~a~~l~ 325 (1057)
..+..|++++.+|.... . .+..+...++..+. ++... + .+..+.||||.+....+ .+..++.
T Consensus 50 -~~~y~gv~l~~i~~~~~-g---------~~~si~yd~~sl~~----al~~~-~-~~~~~~~ii~ilg~~~g~~~~~~~r 112 (185)
T PF09314_consen 50 -EFEYNGVRLVYIPAPKN-G---------SAESIIYDFLSLLH----ALRFI-K-QDKIKYDIILILGYGIGPFFLPFLR 112 (185)
T ss_pred -CcccCCeEEEEeCCCCC-C---------chHHHHHHHHHHHH----HHHHH-h-hccccCCEEEEEcCCccHHHHHHHH
Confidence 12236999999986432 1 12233322222221 11100 0 01135789999887644 3444443
Q ss_pred h--cCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHH
Q 001541 326 G--ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVL 403 (1057)
Q Consensus 326 ~--~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~ 403 (1057)
. ..|.|++++.|++..... ++. ...+...++ .|+.+.+.||.+|+-|+...+.+...|..
T Consensus 113 ~~~~~g~~v~vN~DGlEWkR~---------KW~---~~~k~~lk~-~E~~avk~ad~lIaDs~~I~~y~~~~y~~----- 174 (185)
T PF09314_consen 113 KLRKKGGKVVVNMDGLEWKRA---------KWG---RPAKKYLKF-SEKLAVKYADRLIADSKGIQDYIKERYGR----- 174 (185)
T ss_pred hhhhcCCcEEECCCcchhhhh---------hcC---HHHHHHHHH-HHHHHHHhCCEEEEcCHHHHHHHHHHcCC-----
Confidence 3 347799999999865331 111 111122222 57789999999999999866665555541
Q ss_pred HHHHHHhHhccccccCCCCCcEEEeCCCCC
Q 001541 404 ERKLRARIKRNVSCYGKFMPRMAIIPPGME 433 (1057)
Q Consensus 404 ~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD 433 (1057)
++..+||.|.|
T Consensus 175 -------------------~~s~~IaYGad 185 (185)
T PF09314_consen 175 -------------------KKSTFIAYGAD 185 (185)
T ss_pred -------------------CCcEEecCCCC
Confidence 27899999986
No 146
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.85 E-value=1.6e-08 Score=114.24 Aligned_cols=71 Identities=13% Similarity=0.165 Sum_probs=59.2
Q ss_pred CCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCCeEEc
Q 001541 957 LASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQT 1036 (1057)
Q Consensus 957 gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v 1036 (1057)
+..|+.+++.+++++|++++++++ +||+.| | ++|++.||+|||| ||. ...+..|+ ++
T Consensus 246 ~k~K~~~L~~la~~lgi~~~qtIa-VGDg~N-D-l~m~~~AGlgiA~-nAk--p~Vk~~Ad-----------------~~ 302 (322)
T PRK11133 246 AQYKADTLTRLAQEYEIPLAQTVA-IGDGAN-D-LPMIKAAGLGIAY-HAK--PKVNEQAQ-----------------VT 302 (322)
T ss_pred cccHHHHHHHHHHHcCCChhhEEE-EECCHH-H-HHHHHHCCCeEEe-CCC--HHHHhhCC-----------------EE
Confidence 357999999999999999999999 888888 8 9999999999999 998 33333333 46
Q ss_pred cCCCChHHHHHHHH
Q 001541 1037 PEDCTTSDIRSSLE 1050 (1057)
Q Consensus 1037 t~~~~~dgI~~aL~ 1050 (1057)
+.+.+-+||..-|-
T Consensus 303 i~~~~l~~~l~~~~ 316 (322)
T PRK11133 303 IRHADLMGVLCILS 316 (322)
T ss_pred ecCcCHHHHHHHhc
Confidence 67888899888763
No 147
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=98.84 E-value=4e-09 Score=115.27 Aligned_cols=213 Identities=17% Similarity=0.100 Sum_probs=107.1
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCC-----
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNS----- 241 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~----- 241 (1057)
||++|+.... .-..+||...++..|+++|+++| |+|.|+++.+..-........+...+.-.-.
T Consensus 1 kIl~vt~E~~---------P~~k~GGLgdv~~~L~kaL~~~G--~~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~v~~ 69 (245)
T PF08323_consen 1 KILMVTSEYA---------PFAKVGGLGDVVGSLPKALAKQG--HDVRVIMPKYGFIDEEYFQLEPVRRLSVPFGGPVPV 69 (245)
T ss_dssp EEEEE-S-BT---------TTB-SSHHHHHHHHHHHHHHHTT---EEEEEEE-THHHHHHCTTEEEEEEES-STTCEEEE
T ss_pred CEEEEEcccC---------cccccCcHhHHHHHHHHHHHhcC--CeEEEEEccchhhhhhhhcceEEEEecccccccccc
Confidence 7999986443 22589999999999999999999 9999999876321100000000000000000
Q ss_pred ---CccccccCCCCCeEEEEccCCCcccccccccCCCC-hhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCc
Q 001541 242 ---DDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPH-IPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADA 317 (1057)
Q Consensus 242 ---~~~~~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~-l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~ 317 (1057)
..+.-.....+|+.++.+... .+..+..+... -..+.+...++. -++++..+.+... ..+|||||+|.|.+
T Consensus 70 ~~~~~~~v~~~~~~~v~v~~i~~~---~~f~r~~iY~~~~~~~~d~~~rf~-~fs~a~le~~~~l-~~~pDIIH~hDW~t 144 (245)
T PF08323_consen 70 GVWYEVRVYRYPVDGVPVYFIDNP---EYFDRPGIYGDNGGDYPDNAERFA-FFSRAALELLKKL-GWKPDIIHCHDWHT 144 (245)
T ss_dssp E----EEEEEEEETTEEEEEEESH---HHHGSSSSSBSTSSBHTTHHHHHH-HHHHHHHHHHCTC-T-S-SEEEEECGGG
T ss_pred ccceEEEEEEEEcCCccEEEecCh---hhccccceeccCCCcchhHHHHHH-HHHHHHHHHHHhh-CCCCCEEEecCchH
Confidence 000000011246776665532 12233332211 001222222222 1233444444432 24799999999999
Q ss_pred hHHHHHHHhcC-------CCCEEEEecCCchhhHH---HHHHhhhcchHHH--HHHHHHHHHHHHHHHHhhcCCEEEecC
Q 001541 318 GDSAALLSGAL-------NVPMLFTGHSLGRDKLE---QLLKQARLSRDEI--NATYKIMRRIEAEELSLDASEIVITST 385 (1057)
Q Consensus 318 ~~~a~~l~~~~-------~iP~V~t~H~l~~~~~~---~l~~~g~~~~~~~--~~~yk~~~ri~~E~~~l~~ad~Vi~~S 385 (1057)
+.++.+++... ++|+|+|+|++..+-.. .+...|. +.... ...+.....+...+..+..||.|+|+|
T Consensus 145 al~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl-~~~~~~~~~~~~~~~~in~lk~gi~~AD~v~TVS 223 (245)
T PF08323_consen 145 ALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGL-PDEYFQNLDEYEFYGQINFLKAGIVYADKVTTVS 223 (245)
T ss_dssp TTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT--GGGGS-STTTTEETTEEEHHHHHHHHSSEEEESS
T ss_pred HHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCC-CHHHhccccccccccccCHHHHHHHhcCEeeeCC
Confidence 99999998776 59999999997442210 0000000 00000 000001112223456899999999999
Q ss_pred HHHHHHHHhhh
Q 001541 386 RQEIEEQWRLY 396 (1057)
Q Consensus 386 ~~~~~~~~~~y 396 (1057)
+..+++....+
T Consensus 224 ~~Ya~Ei~~~~ 234 (245)
T PF08323_consen 224 PTYAREIQTPE 234 (245)
T ss_dssp HHHHHHTTSHH
T ss_pred HHHHHHHhCcc
Confidence 99988876543
No 148
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.83 E-value=1.4e-08 Score=102.88 Aligned_cols=72 Identities=13% Similarity=0.079 Sum_probs=58.4
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCCeEEccC
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPE 1038 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~ 1038 (1057)
+|..++..+++++|++++++++ +||+.| | ++|++.+|.+++|.|+.+ ..+ +.+.+++.
T Consensus 76 ~k~~~~~~~~~~~~~~~~~~~~-vGDs~~-D-~~~~~~ag~~~~v~~~~~--~~~-----------------~~a~~i~~ 133 (154)
T TIGR01670 76 NKLIAFSDILEKLALAPENVAY-IGDDLI-D-WPVMEKVGLSVAVADAHP--LLI-----------------PRADYVTR 133 (154)
T ss_pred chHHHHHHHHHHcCCCHHHEEE-ECCCHH-H-HHHHHHCCCeEecCCcCH--HHH-----------------HhCCEEec
Confidence 3788999999999999999888 999999 9 999999999999999982 212 23345777
Q ss_pred CCChHH-HHHHHHHh
Q 001541 1039 DCTTSD-IRSSLEQL 1052 (1057)
Q Consensus 1039 ~~~~dg-I~~aL~~~ 1052 (1057)
+...+| ++++++++
T Consensus 134 ~~~~~g~~~~~~~~~ 148 (154)
T TIGR01670 134 IAGGRGAVREVCELL 148 (154)
T ss_pred CCCCCcHHHHHHHHH
Confidence 776444 99998875
No 149
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.80 E-value=1.4e-08 Score=104.11 Aligned_cols=70 Identities=11% Similarity=0.094 Sum_probs=54.5
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCCeEEccC
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPE 1038 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~ 1038 (1057)
.|...++.+++++|++++++++ +||+.| | ++|++.+|+++||+||. .+.+.+++ +|+.
T Consensus 82 pkp~~~~~~~~~l~~~~~ev~~-iGD~~n-D-i~~~~~ag~~~am~nA~--~~lk~~A~-----------------~I~~ 139 (169)
T TIGR02726 82 KKTEPYAQMLEEMNISDAEVCY-VGDDLV-D-LSMMKRVGLAVAVGDAV--ADVKEAAA-----------------YVTT 139 (169)
T ss_pred CCHHHHHHHHHHcCcCHHHEEE-ECCCHH-H-HHHHHHCCCeEECcCch--HHHHHhCC-----------------EEcC
Confidence 3567899999999999999998 888888 8 99999999999999999 33333333 4777
Q ss_pred CCChHHH-HHHHH
Q 001541 1039 DCTTSDI-RSSLE 1050 (1057)
Q Consensus 1039 ~~~~dgI-~~aL~ 1050 (1057)
.+..+|+ ...++
T Consensus 140 ~~~~~g~v~e~~e 152 (169)
T TIGR02726 140 ARGGHGAVREVAE 152 (169)
T ss_pred CCCCCCHHHHHHH
Confidence 6777664 44333
No 150
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=98.79 E-value=4.9e-06 Score=97.65 Aligned_cols=111 Identities=20% Similarity=0.193 Sum_probs=76.6
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCch----hhhhcCCceEEeCCC
Q 001541 543 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPV----DIHRVLDNGLLVDPH 618 (1057)
Q Consensus 543 ~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~----eiv~~~~~Gllv~p~ 618 (1057)
.++|.+.+++++. +++..| |++|..+ |. .++.||+++|+|+|+....+-. ..+...+.|..++..
T Consensus 274 ~~~v~~~~~~p~~---~ll~~~----~~~I~hg---G~-~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~ 342 (392)
T TIGR01426 274 PPNVEVRQWVPQL---EILKKA----DAFITHG---GM-NSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPPE 342 (392)
T ss_pred CCCeEEeCCCCHH---HHHhhC----CEEEECC---Cc-hHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEeccc
Confidence 4678888998753 778888 9988653 33 4789999999999997755433 234455677777643
Q ss_pred --CHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 001541 619 --DQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRI 664 (1057)
Q Consensus 619 --d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~ 664 (1057)
+.++++++|.+++.+++.++++.+-+.+....-.-+..++.+.+++
T Consensus 343 ~~~~~~l~~ai~~~l~~~~~~~~~~~l~~~~~~~~~~~~aa~~i~~~~ 390 (392)
T TIGR01426 343 EVTAEKLREAVLAVLSDPRYAERLRKMRAEIREAGGARRAADEIEGFL 390 (392)
T ss_pred cCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHhh
Confidence 5789999999999998766555443333334445566665555443
No 151
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.77 E-value=1.1e-05 Score=91.78 Aligned_cols=264 Identities=16% Similarity=0.206 Sum_probs=164.0
Q ss_pred CcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEec
Q 001541 305 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 384 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~ 384 (1057)
.+||++...-...-+....-++..|+|+++----+ +.... ..|+...++ .+.++...|.|++.
T Consensus 122 ~~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaRL--------------S~rS~-~~y~k~~~~--~~~~~~~i~li~aQ 184 (419)
T COG1519 122 WRPKLLIIMETELWPNLINELKRRGIPLVLVNARL--------------SDRSF-ARYAKLKFL--ARLLFKNIDLILAQ 184 (419)
T ss_pred cCCCEEEEEeccccHHHHHHHHHcCCCEEEEeeee--------------chhhh-HHHHHHHHH--HHHHHHhcceeeec
Confidence 46998776543222233344556799987643222 11111 122222222 45679999999999
Q ss_pred CHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHH
Q 001541 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 464 (1057)
Q Consensus 385 S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1057)
|+...+++..+... ++.+.-| +-++ .... ........
T Consensus 185 se~D~~Rf~~LGa~-------------------------~v~v~GN-lKfd--~~~~---------------~~~~~~~~ 221 (419)
T COG1519 185 SEEDAQRFRSLGAK-------------------------PVVVTGN-LKFD--IEPP---------------PQLAAELA 221 (419)
T ss_pred CHHHHHHHHhcCCc-------------------------ceEEecc-eeec--CCCC---------------hhhHHHHH
Confidence 99888876554211 3555544 1111 1100 01222334
Q ss_pred HHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCC
Q 001541 465 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYG 544 (1057)
Q Consensus 465 ~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~ 544 (1057)
..+..+..+ ++++++.+.- ..--+.+++++..+++ ..+++.+|+-.+.. +-...+.+++.+.|+.-
T Consensus 222 ~~r~~l~~~-r~v~iaaSTH--~GEeei~l~~~~~l~~--~~~~~llIlVPRHp---------ERf~~v~~l~~~~gl~~ 287 (419)
T COG1519 222 ALRRQLGGH-RPVWVAASTH--EGEEEIILDAHQALKK--QFPNLLLILVPRHP---------ERFKAVENLLKRKGLSV 287 (419)
T ss_pred HHHHhcCCC-CceEEEecCC--CchHHHHHHHHHHHHh--hCCCceEEEecCCh---------hhHHHHHHHHHHcCCeE
Confidence 444444333 8999999983 2334568899999875 44566655444321 23677888888888721
Q ss_pred CEEeCCC----CC--------CCcHHHHHHHhhcCCcEEEEc-CCCCCCCHHHHHHHHcCCcEEEcCC-CCchhh---hh
Q 001541 545 QVAYPKH----HK--------QSDVPEIYRLAAKTKGVFINP-AFIEPFGLTLIEAAAHGLPIVATKN-GGPVDI---HR 607 (1057)
Q Consensus 545 ~V~f~g~----v~--------~~dl~~ly~~Aa~~~dv~v~p-s~~Egfgl~~lEAmA~G~PVVat~~-Gg~~ei---v~ 607 (1057)
..+-.. .+ --++..+|+.| |++++- |+.+--|=-++|++++|+|||.-.. -...|+ +.
T Consensus 288 -~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~a----diAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~ 362 (419)
T COG1519 288 -TRRSQGDPPFSDTDVLLGDTMGELGLLYGIA----DIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLL 362 (419)
T ss_pred -EeecCCCCCCCCCcEEEEecHhHHHHHHhhc----cEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHH
Confidence 221111 11 23899999999 777665 6766557789999999999999653 233333 33
Q ss_pred cCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhh
Q 001541 608 VLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIH 649 (1057)
Q Consensus 608 ~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~ 649 (1057)
..+.|+.|+ |.+.+++++..++++++.++++++++...+.
T Consensus 363 ~~ga~~~v~--~~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~ 402 (419)
T COG1519 363 QAGAGLQVE--DADLLAKAVELLLADEDKREAYGRAGLEFLA 402 (419)
T ss_pred hcCCeEEEC--CHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 445678887 6899999999999999999999999999884
No 152
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.74 E-value=7.1e-06 Score=95.23 Aligned_cols=264 Identities=17% Similarity=0.132 Sum_probs=150.6
Q ss_pred CcceEEEEcC-CCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEe
Q 001541 305 VWPVAIHGHY-ADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 383 (1057)
Q Consensus 305 ~~pDvIh~h~-~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~ 383 (1057)
.+||+|.+|. ......+++.+..+++|+++..-+.-... . . ++ ..|++ .-+-|+..++
T Consensus 92 ~~Pd~vlv~GD~~~~la~alaA~~~~IPv~HveaG~rs~~--------~-~-eE------~~r~~-----i~~la~l~f~ 150 (365)
T TIGR03568 92 LKPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHGGEVTEG--------A-I-DE------SIRHA-----ITKLSHLHFV 150 (365)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHhCCcEEEEECCccCCC--------C-c-hH------HHHHH-----HHHHHhhccC
Confidence 6799999998 46777788888899999985433321100 0 0 00 11111 2344677778
Q ss_pred cCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCC-CCCCCCcCCCCCCCCCCCCCCCCCCCCCCCch
Q 001541 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPP-GMEFHHIVPQDGDMDGETEGNEDNPASPDPPI 462 (1057)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpn-GiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~ 462 (1057)
+++...+.+.+ .|....++.++.| ++|.-...... ..
T Consensus 151 ~t~~~~~~L~~-----------------------eg~~~~~i~~tG~~~iD~l~~~~~~-------------------~~ 188 (365)
T TIGR03568 151 ATEEYRQRVIQ-----------------------MGEDPDRVFNVGSPGLDNILSLDLL-------------------SK 188 (365)
T ss_pred CCHHHHHHHHH-----------------------cCCCCCcEEEECCcHHHHHHhhhcc-------------------CH
Confidence 88776555432 2333347777755 55532211100 01
Q ss_pred HHHHHhhhCCCCCcEEEE-EeCC-----CCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHH
Q 001541 463 WSEIMRFFTNPRKPVILA-LARP-----DPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKL 536 (1057)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~-vGRl-----~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l 536 (1057)
.....++..++++++++. +-+- ...+.+..+++++..+. . ++.++.-+.+.. ...+...+..+
T Consensus 189 ~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~---~--~~~vi~P~~~p~------~~~i~~~i~~~ 257 (365)
T TIGR03568 189 EELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDELN---K--NYIFTYPNADAG------SRIINEAIEEY 257 (365)
T ss_pred HHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHhc---c--CCEEEEeCCCCC------chHHHHHHHHH
Confidence 122233333334455443 3332 22334666666665541 1 333443222210 11223334333
Q ss_pred HHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeC
Q 001541 537 IDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVD 616 (1057)
Q Consensus 537 ~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~ 616 (1057)
... .++|.+.+.++..++..+++.| +++|--| -|.. .||.++|+|+|+- |.-+|.+..+.|.++|
T Consensus 258 ~~~---~~~v~l~~~l~~~~~l~Ll~~a----~~vitdS----Sggi-~EA~~lg~Pvv~l--~~R~e~~~~g~nvl~v- 322 (365)
T TIGR03568 258 VNE---HPNFRLFKSLGQERYLSLLKNA----DAVIGNS----SSGI-IEAPSFGVPTINI--GTRQKGRLRADSVIDV- 322 (365)
T ss_pred hcC---CCCEEEECCCChHHHHHHHHhC----CEEEEcC----hhHH-HhhhhcCCCEEee--cCCchhhhhcCeEEEe-
Confidence 211 4679999999999999999999 8877332 2333 8999999999954 5677887778888888
Q ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHH
Q 001541 617 PHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSR 663 (1057)
Q Consensus 617 p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~ 663 (1057)
+.|+++|.+++.+++ ++..++.+ ... ..|.....++++.++
T Consensus 323 g~~~~~I~~a~~~~~-~~~~~~~~-----~~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 323 DPDKEEIVKAIEKLL-DPAFKKSL-----KNVKNPYGDGNSSERIIEI 364 (365)
T ss_pred CCCHHHHHHHHHHHh-ChHHHHHH-----hhCCCCCCCChHHHHHHHh
Confidence 569999999999954 44332222 222 356656666665553
No 153
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.62 E-value=2.3e-06 Score=97.33 Aligned_cols=118 Identities=19% Similarity=0.303 Sum_probs=79.8
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCC
Q 001541 473 PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHH 552 (1057)
Q Consensus 473 ~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v 552 (1057)
+.+.+++++|..+.. .+++++..+. ...++ ++|.... +. -.++|.+.++.
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~~----~~~~~-v~g~~~~-~~--------------------~~~ni~~~~~~ 240 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKALP----DYQFI-VFGPNAA-DP--------------------RPGNIHVRPFS 240 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhCC----CCeEE-EEcCCcc-cc--------------------cCCCEEEeecC
Confidence 346689999998766 6677777753 23443 4465421 00 04678887763
Q ss_pred CCCcHHHHHHHhhcCCcEEEEcCCCCCCCH-HHHHHHHcCCcEEEcCCCCchh------hhhcCCceEEeCCC--CHHHH
Q 001541 553 KQSDVPEIYRLAAKTKGVFINPAFIEPFGL-TLIEAAAHGLPIVATKNGGPVD------IHRVLDNGLLVDPH--DQQSV 623 (1057)
Q Consensus 553 ~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl-~~lEAmA~G~PVVat~~Gg~~e------iv~~~~~Gllv~p~--d~~~l 623 (1057)
..++.+++..| |++|..+ |. ++.|++++|+|+|.-...+..| .++..+.|..+++. +++.|
T Consensus 241 -~~~~~~~m~~a----d~vIs~~-----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l 310 (318)
T PF13528_consen 241 -TPDFAELMAAA----DLVISKG-----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERL 310 (318)
T ss_pred -hHHHHHHHHhC----CEEEECC-----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHH
Confidence 37899999999 9988653 44 4999999999999988755333 33445567676543 56888
Q ss_pred HHHHHHH
Q 001541 624 ADALLKL 630 (1057)
Q Consensus 624 a~aI~~l 630 (1057)
+++|.++
T Consensus 311 ~~~l~~~ 317 (318)
T PF13528_consen 311 AEFLERL 317 (318)
T ss_pred HHHHhcC
Confidence 8888653
No 154
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=98.61 E-value=6.1e-06 Score=94.19 Aligned_cols=111 Identities=14% Similarity=0.211 Sum_probs=74.8
Q ss_pred CHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCC
Q 001541 489 NITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTK 568 (1057)
Q Consensus 489 gi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~ 568 (1057)
+...+++++..+. ++.+++|+.+.. . + .+.+++.+.++.+ +++.++|..|
T Consensus 199 ~~~~l~~~l~~~~------~~~~i~~~~~~~-~----------------~--~~~~~v~~~~~~~-~~~~~~l~~a---- 248 (321)
T TIGR00661 199 YRYKILELLGKIA------NVKFVCYSYEVA-K----------------N--SYNENVEIRRITT-DNFKELIKNA---- 248 (321)
T ss_pred CHHHHHHHHHhCC------CeEEEEeCCCCC-c----------------c--ccCCCEEEEECCh-HHHHHHHHhC----
Confidence 5567788876652 455666643210 0 1 2236788888755 6899999999
Q ss_pred cEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchh------hhhcCCceEEeCCCCHHHHHHHHHHHHhCH
Q 001541 569 GVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVD------IHRVLDNGLLVDPHDQQSVADALLKLVADK 634 (1057)
Q Consensus 569 dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~e------iv~~~~~Gllv~p~d~~~la~aI~~ll~d~ 634 (1057)
|++|.-+ | ..++.||+++|+|+|.....+..| .+...+.|+.++..+. ++.+++...++++
T Consensus 249 d~vI~~~---G-~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~~-~~~~~~~~~~~~~ 315 (321)
T TIGR00661 249 ELVITHG---G-FSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKEL-RLLEAILDIRNMK 315 (321)
T ss_pred CEEEECC---C-hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhhH-HHHHHHHhccccc
Confidence 9999765 2 246899999999999988765333 3455567888877776 5555555555543
No 155
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.59 E-value=8.8e-08 Score=100.04 Aligned_cols=45 Identities=13% Similarity=0.124 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCCc
Q 001541 960 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGIC 1007 (1057)
Q Consensus 960 Kg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~ 1007 (1057)
|..+++.+++++|++++++++ +||+.+ | ++|++.+|++++|+++.
T Consensus 97 k~~~l~~~~~~~gl~~~ev~~-VGDs~~-D-~~~a~~aG~~~~v~~~~ 141 (183)
T PRK09484 97 KLIAFSDLLEKLAIAPEQVAY-IGDDLI-D-WPVMEKVGLSVAVADAH 141 (183)
T ss_pred HHHHHHHHHHHhCCCHHHEEE-ECCCHH-H-HHHHHHCCCeEecCChh
Confidence 557899999999999999988 888888 8 99999999999998765
No 156
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.54 E-value=9.2e-07 Score=87.56 Aligned_cols=128 Identities=20% Similarity=0.267 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCcccccccccC
Q 001541 194 VKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELL 273 (1057)
Q Consensus 194 ~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l~k~~l 273 (1057)
..++..+++.|.+.| ++|+++|.....+. ....+++.+++++.+.. ..
T Consensus 10 ~~~~~~~~~~L~~~g--~~V~ii~~~~~~~~-----------------------~~~~~~i~~~~~~~~~k-------~~ 57 (139)
T PF13477_consen 10 STFIYNLAKELKKRG--YDVHIITPRNDYEK-----------------------YEIIEGIKVIRLPSPRK-------SP 57 (139)
T ss_pred HHHHHHHHHHHHHCC--CEEEEEEcCCCchh-----------------------hhHhCCeEEEEecCCCC-------cc
Confidence 457899999999999 99999998532111 11135888988864321 12
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCc-hHHHHHHHhcCC-CCEEEEecCCchhhHHHHHHhh
Q 001541 274 WPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADA-GDSAALLSGALN-VPMLFTGHSLGRDKLEQLLKQA 351 (1057)
Q Consensus 274 ~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~-~~~a~~l~~~~~-iP~V~t~H~l~~~~~~~l~~~g 351 (1057)
++++ . +.++.+.+.+ .+|||||+|.+.+ +.++.++++..+ +|+|++.|+.......
T Consensus 58 ~~~~--------~-~~~l~k~ik~-------~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~~~------ 115 (139)
T PF13477_consen 58 LNYI--------K-YFRLRKIIKK-------EKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYNSS------ 115 (139)
T ss_pred HHHH--------H-HHHHHHHhcc-------CCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeecCC------
Confidence 2222 1 1122333333 6799999999865 787888888888 9999999987431110
Q ss_pred hcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecC
Q 001541 352 RLSRDEINATYKIMRRIEAEELSLDASEIVITST 385 (1057)
Q Consensus 352 ~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S 385 (1057)
.. ...+++ .++++++.||.|++.|
T Consensus 116 --~~---~~~~~~-----~~~~~~k~~~~ii~~~ 139 (139)
T PF13477_consen 116 --KK---KKLKKF-----IIKFAFKRADKIIVQS 139 (139)
T ss_pred --ch---HHHHHH-----HHHHHHHhCCEEEEcC
Confidence 00 001222 2556899999999875
No 157
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.47 E-value=1.8e-05 Score=88.44 Aligned_cols=98 Identities=22% Similarity=0.302 Sum_probs=74.7
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCC
Q 001541 475 KPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQ 554 (1057)
Q Consensus 475 ~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~ 554 (1057)
+.+++++|..++.+....+++++..+. ...++.+|+|.+... ..++.+.+... +++.+.+++
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~~i~vv~G~~~~~----------~~~l~~~~~~~---~~i~~~~~~-- 232 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ---INISITLVTGSSNPN----------LDELKKFAKEY---PNIILFIDV-- 232 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc---cCceEEEEECCCCcC----------HHHHHHHHHhC---CCEEEEeCH--
Confidence 468999999999876778888887752 344676788876421 34455555543 478888884
Q ss_pred CcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCC
Q 001541 555 SDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN 599 (1057)
Q Consensus 555 ~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~ 599 (1057)
++++++|+.| |++|.+ .|.|+.|++++|+|+|+-..
T Consensus 233 ~~m~~lm~~a----Dl~Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 233 ENMAELMNEA----DLAIGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred HHHHHHHHHC----CEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence 6999999999 999875 47999999999999998765
No 158
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.37 E-value=7.5e-07 Score=90.46 Aligned_cols=67 Identities=13% Similarity=0.181 Sum_probs=56.2
Q ss_pred EEEEEecCCCC--------------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHH---HHHHh-----CCCCC
Q 001541 776 IFVISVDCDST--------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIH---SFLVS-----GHLSP 833 (1057)
Q Consensus 776 Li~~DiDGTL~--------------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~---~~l~~-----lgl~~ 833 (1057)
+|++||||||+ ..+++.+++++++++++ |+.|+++|||+...+. +++.. .+++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~----G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp- 75 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNN----GYKILYLTARPIGQADRTRSYLSQIKQDGHNLP- 75 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHc----CCeEEEEcCCcHHHHHHHHHHHHHhhhccccCC-
Confidence 58999999993 36789999999999987 8999999999999884 88888 3352
Q ss_pred CCCCeEEeCCCcEEEe
Q 001541 834 SDFDAFICNSGSDLYY 849 (1057)
Q Consensus 834 ~~~D~lI~~nGa~I~~ 849 (1057)
..++||+||+.++.
T Consensus 76 --~g~li~~~g~~~~~ 89 (157)
T smart00775 76 --HGPVLLSPDRLFAA 89 (157)
T ss_pred --CceEEEcCCcchhh
Confidence 25799999998864
No 159
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.32 E-value=2.6e-06 Score=90.84 Aligned_cols=52 Identities=23% Similarity=0.301 Sum_probs=45.5
Q ss_pred eEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeC
Q 001541 950 RINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 1004 (1057)
Q Consensus 950 ~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMg 1004 (1057)
.+-.+-.+-+|..+|+.++..+|++++++++ .||+.| | ++||+.+|++||..
T Consensus 135 v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a-~gDs~n-D-lpml~~ag~~ia~n 186 (212)
T COG0560 135 VVGPICDGEGKAKALRELAAELGIPLEETVA-YGDSAN-D-LPMLEAAGLPIAVN 186 (212)
T ss_pred eeeeecCcchHHHHHHHHHHHcCCCHHHeEE-EcCchh-h-HHHHHhCCCCeEeC
Confidence 3444445568999999999999999999999 899999 8 99999999999996
No 160
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.30 E-value=6.9e-05 Score=83.96 Aligned_cols=192 Identities=15% Similarity=0.104 Sum_probs=136.9
Q ss_pred cEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc
Q 001541 424 RMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPL 503 (1057)
Q Consensus 424 rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~ 503 (1057)
++..+|.++|.+.|.|.+++. .-.--+.++|...|. +++...++.-.
T Consensus 162 ~~~~~~~a~d~~~~~~i~~da----------------------------~~~~dL~~ign~~pD-----r~e~~ke~~~~ 208 (373)
T COG4641 162 NCYYLPWAVDDSLFHPIPPDA----------------------------SYDVDLNLIGNPYPD-----RVEEIKEFFVE 208 (373)
T ss_pred ceeccCccCCchhcccCCccc----------------------------cceeeeEEecCCCcc-----HHHHHHHHhhc
Confidence 678899999999998765332 111247788877654 44444444311
Q ss_pred --cCCCc-EEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCC-CcHHHHHHHhhcCCcEEEEcCC--
Q 001541 504 --RELAN-LTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQ-SDVPEIYRLAAKTKGVFINPAF-- 576 (1057)
Q Consensus 504 --~~~~~-l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~-~dl~~ly~~Aa~~~dv~v~ps~-- 576 (1057)
.+.+. ..+ +.|.+- + .-+..-.+.+++.+.|+.+. ..++..++-- +++++-+.
T Consensus 209 ps~kl~v~rr~~~~g~~y-~---------------~~~~~~~~~~~~~yIg~~~~~~~v~~~~~~~----~~~~n~~r~~ 268 (373)
T COG4641 209 PSFKLMVDRRFYVLGPRY-P---------------DDIWGRTWEPNVQYIGYYNPKDGVPNAFKRD----DVTLNINRAS 268 (373)
T ss_pred cchhhhccceeeecCCcc-c---------------hhhhcccccchhhhhhccCccchhhhccccc----ceeeeecHHH
Confidence 11121 222 334431 0 01122235567888888877 7788888888 88887653
Q ss_pred -CCC---CCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcC
Q 001541 577 -IEP---FGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLF 651 (1057)
Q Consensus 577 -~Eg---fgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~f 651 (1057)
.++ +++-+.|+++||.|.++....+..-.+.+|..-++.. |..++.+.+..++..+++++++.+.+.+.+ ..|
T Consensus 269 ~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~~--d~kdl~~~~~yll~h~~erkeiae~~ye~V~~~h 346 (373)
T COG4641 269 IANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVYQ--DSKDLKEKLKYLLNHPDERKEIAECAYERVLARH 346 (373)
T ss_pred HHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEec--CHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHhc
Confidence 222 3788999999999999999888888887776655554 999999999999999999999999999999 589
Q ss_pred CHHHHHHHHHHHHHcccCC
Q 001541 652 SWPEHCKTYLSRIAGCKPR 670 (1057)
Q Consensus 652 sw~~~a~~~l~~~~~~~~~ 670 (1057)
+.++-+.+++..+..+..+
T Consensus 347 t~~~r~~~~~~~i~sI~~r 365 (373)
T COG4641 347 TYEERIFKLLNEIASINIR 365 (373)
T ss_pred cHHHHHHHHHHHHHHHHHh
Confidence 9999999999888876554
No 161
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=98.29 E-value=0.00054 Score=82.89 Aligned_cols=165 Identities=13% Similarity=0.105 Sum_probs=103.4
Q ss_pred HHHhhhCCCC-CcEEEEEeCCCC-----CCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHH
Q 001541 465 EIMRFFTNPR-KPVILALARPDP-----KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLID 538 (1057)
Q Consensus 465 ~~~~~~~~~~-~~~Il~vGRl~~-----~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~ 538 (1057)
++..|+.... .+++++.|.... .+-+..+++|++.+. ..+ ++..+++...
T Consensus 286 ~l~~fl~~~~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~-----~~v-iw~~~~~~~~------------------ 341 (507)
T PHA03392 286 YLEEFLNNSTNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP-----YNV-LWKYDGEVEA------------------ 341 (507)
T ss_pred HHHHHHhcCCCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCC-----CeE-EEEECCCcCc------------------
Confidence 4445554433 467788888643 334577778887663 122 2222221100
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHH--HhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhhhcCCce
Q 001541 539 KYDLYGQVAYPKHHKQSDVPEIYR--LAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRVLDNG 612 (1057)
Q Consensus 539 ~~~l~~~V~f~g~v~~~dl~~ly~--~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv~~~~~G 612 (1057)
.++.++|.+.+++|+. +++. .+ ++||. -|-..++.||+.+|+|+|+-...+ ....+...+.|
T Consensus 342 -~~~p~Nv~i~~w~Pq~---~lL~hp~v----~~fIt----HGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G 409 (507)
T PHA03392 342 -INLPANVLTQKWFPQR---AVLKHKNV----KAFVT----QGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIG 409 (507)
T ss_pred -ccCCCceEEecCCCHH---HHhcCCCC----CEEEe----cCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcE
Confidence 1345789999999886 4553 35 67773 345678999999999999987544 23334455678
Q ss_pred EEeCCC--CHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 001541 613 LLVDPH--DQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 613 llv~p~--d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~ 665 (1057)
+.++.. +.+++.+||.+++++|..++.+.+-+.... +..+-.+-+-.+.+.+.
T Consensus 410 ~~l~~~~~t~~~l~~ai~~vl~~~~y~~~a~~ls~~~~~~p~~~~~~av~~iE~v~ 465 (507)
T PHA03392 410 RALDTVTVSAAQLVLAIVDVIENPKYRKNLKELRHLIRHQPMTPLHKAIWYTEHVI 465 (507)
T ss_pred EEeccCCcCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 888654 578999999999999876666555555444 33444444445554443
No 162
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=98.20 E-value=0.00038 Score=78.83 Aligned_cols=272 Identities=17% Similarity=0.178 Sum_probs=169.6
Q ss_pred CcceEEEEcCC-CchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEe
Q 001541 305 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 383 (1057)
Q Consensus 305 ~~pDvIh~h~~-~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~ 383 (1057)
.+||+|..|.= .+..++++++...++|+.+---++-..... + .+. +-|+ ..-.-|+.-++
T Consensus 91 ~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt~~~~-------~-PEE------~NR~-----l~~~~S~~hfa 151 (383)
T COG0381 91 EKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRTGDLY-------F-PEE------INRR-----LTSHLSDLHFA 151 (383)
T ss_pred hCCCEEEEeCCcchHHHHHHHHHHhCCceEEEecccccCCCC-------C-cHH------HHHH-----HHHHhhhhhcC
Confidence 78999999874 455666788888899998876665221100 0 111 1122 23455777888
Q ss_pred cCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCC-CCCCcCC-CCCCCCCCCCCCCCCCCCCCCc
Q 001541 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGM-EFHHIVP-QDGDMDGETEGNEDNPASPDPP 461 (1057)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGi-D~~~f~p-~~~~~~~~~~~~~~~~~~~~~~ 461 (1057)
.|...++.+.+ .|.+..+|.|+-|.+ |.-.... ... ....
T Consensus 152 pte~ar~nLl~-----------------------EG~~~~~IfvtGnt~iDal~~~~~~~~---------------~~~~ 193 (383)
T COG0381 152 PTEIARKNLLR-----------------------EGVPEKRIFVTGNTVIDALLNTRDRVL---------------EDSK 193 (383)
T ss_pred ChHHHHHHHHH-----------------------cCCCccceEEeCChHHHHHHHHHhhhc---------------cchh
Confidence 88877666543 344445799998864 3221110 000 0000
Q ss_pred hHHHHHhhhCCCCCcEEEEEe-CCCCC-CCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHH-H
Q 001541 462 IWSEIMRFFTNPRKPVILALA-RPDPK-KNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLI-D 538 (1057)
Q Consensus 462 ~~~~~~~~~~~~~~~~Il~vG-Rl~~~-Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~-~ 538 (1057)
. ...++...++++|+..+ |-.-. +++..+++|+.++.++. +++.+|.-..+. ..++... .
T Consensus 194 ~---~~~~~~~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~--~~~~viyp~H~~------------~~v~e~~~~ 256 (383)
T COG0381 194 I---LAKGLDDKDKKYILVTAHRRENVGEPLEEICEALREIAEEY--PDVIVIYPVHPR------------PRVRELVLK 256 (383)
T ss_pred h---HHhhhccccCcEEEEEcchhhcccccHHHHHHHHHHHHHhC--CCceEEEeCCCC------------hhhhHHHHH
Confidence 1 11113345555665554 43332 89999999999998654 566666665543 2223333 5
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCC-CCchhhhhcCCceEEeCC
Q 001541 539 KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN-GGPVDIHRVLDNGLLVDP 617 (1057)
Q Consensus 539 ~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~-Gg~~eiv~~~~~Gllv~p 617 (1057)
.++-..+|.+...+...+...++..| .++++- -|-..-||-..|+||+.-.. ..-+|-+.. +.-.+|.
T Consensus 257 ~L~~~~~v~li~pl~~~~f~~L~~~a-----~~iltD----SGgiqEEAp~lg~Pvl~lR~~TERPE~v~a-gt~~lvg- 325 (383)
T COG0381 257 RLKNVERVKLIDPLGYLDFHNLMKNA-----FLILTD----SGGIQEEAPSLGKPVLVLRDTTERPEGVEA-GTNILVG- 325 (383)
T ss_pred HhCCCCcEEEeCCcchHHHHHHHHhc-----eEEEec----CCchhhhHHhcCCcEEeeccCCCCccceec-CceEEeC-
Confidence 56666779999999999999999999 556552 25567899999999999663 334455543 3445665
Q ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 001541 618 HDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 618 ~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~ 665 (1057)
.+.+.+.+++..++++++.+++|+... ..|.-...++++.+++.
T Consensus 326 ~~~~~i~~~~~~ll~~~~~~~~m~~~~----npYgdg~as~rIv~~l~ 369 (383)
T COG0381 326 TDEENILDAATELLEDEEFYERMSNAK----NPYGDGNASERIVEILL 369 (383)
T ss_pred ccHHHHHHHHHHHhhChHHHHHHhccc----CCCcCcchHHHHHHHHH
Confidence 488999999999999999887765432 34544445555555554
No 163
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.20 E-value=3e-06 Score=82.57 Aligned_cols=52 Identities=17% Similarity=0.215 Sum_probs=46.1
Q ss_pred EEEEEecCCCC--C---------cchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 776 IFVISVDCDST--T---------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 776 Li~~DiDGTL~--~---------~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
+++||+||||. . .+.+.+.+.|+.++++ |+.++|+|||+...+..+++.+++
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----g~~i~ivS~~~~~~~~~~~~~~~~ 63 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEK----GIKLALATNKSRREVLELLEELGL 63 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHC----CCeEEEEeCchHHHHHHHHHHcCC
Confidence 48999999992 2 5678899999999986 899999999999999999999887
No 164
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=98.18 E-value=9.7e-06 Score=90.58 Aligned_cols=103 Identities=22% Similarity=0.330 Sum_probs=73.0
Q ss_pred cHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCch----hhhhcC-CceEEe-C------CCCHHHH
Q 001541 556 DVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPV----DIHRVL-DNGLLV-D------PHDQQSV 623 (1057)
Q Consensus 556 dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~----eiv~~~-~~Gllv-~------p~d~~~l 623 (1057)
|..++.+.| .+.|+||.+||+|.+..|.-.+|+|-|+|+..|+. |.|++. .-|+.+ + ..+.+++
T Consensus 493 DYeeFVRGC----HLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL 568 (692)
T KOG3742|consen 493 DYEEFVRGC----HLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQL 568 (692)
T ss_pred CHHHHhccc----cccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHH
Confidence 788999999 99999999999999999999999999999987754 344332 236544 2 2345677
Q ss_pred HHHHHHHHhCHHHHHHHHHHHH-HHh-hcCCHHHHHHHHHHH
Q 001541 624 ADALLKLVADKQLWARCRQNGL-KNI-HLFSWPEHCKTYLSR 663 (1057)
Q Consensus 624 a~aI~~ll~d~~~~~~~~~~~~-~~v-~~fsw~~~a~~~l~~ 663 (1057)
++-|...... ..+|++-++.+ ++. ...+|..+..-|.+.
T Consensus 569 ~~~m~~F~~q-sRRQRIiqRNrtErLSdLLDWk~lG~~Y~~a 609 (692)
T KOG3742|consen 569 ASFMYEFCKQ-SRRQRIIQRNRTERLSDLLDWKYLGRYYRKA 609 (692)
T ss_pred HHHHHHHHHH-HHHHHHHHhcchhhHHHHHhHHHHhHHHHHH
Confidence 7777666543 33444433332 333 478999888877764
No 165
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=98.18 E-value=5.9e-06 Score=90.73 Aligned_cols=70 Identities=14% Similarity=0.242 Sum_probs=58.4
Q ss_pred eEEEEEecCCCC--CcchHHHHHHHHHHHhhhcCCCeEEEEECC---CCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEe
Q 001541 775 HIFVISVDCDST--TGLLDATKKICEAVEKERTEGSIGFILSTS---MTISEIHSFLVSGHLSPSDFDAFICNSGSDLYY 849 (1057)
Q Consensus 775 kLi~~DiDGTL~--~~i~~~t~~al~~l~~~~~~~gi~~vIaTG---R~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~ 849 (1057)
|.|+||+||||. ..+.+.+.++|++++++ |+.|+++|| |+...+...++.+|++. .+|-+|+++|+.+.|
T Consensus 2 ~~~~~D~DGtl~~~~~~i~~a~~~l~~l~~~----g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~-~~~~iit~~~~~~~~ 76 (249)
T TIGR01457 2 KGYLIDLDGTMYKGKERIPEAETFVHELQKR----DIPYLFVTNNSTRTPESVAEMLASFDIPA-TLETVFTASMATADY 76 (249)
T ss_pred CEEEEeCCCceEcCCeeCcCHHHHHHHHHHC----CCeEEEEeCCCCCCHHHHHHHHHHcCCCC-ChhhEeeHHHHHHHH
Confidence 689999999992 33334789999999987 899999995 99999999999999974 457799998886654
No 166
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=98.12 E-value=4.1e-05 Score=77.45 Aligned_cols=195 Identities=14% Similarity=0.159 Sum_probs=110.8
Q ss_pred CcceEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCC-CCCCeEEeCCCcEE
Q 001541 772 RRKHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSP-SDFDAFICNSGSDL 847 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~-~~~D~lI~~nGa~I 847 (1057)
.++-|+.||+||||+ ..++++..+.|+.+++. +.+.++-|-.++-+.+-+ |-++ ..||+.-+.||-.-
T Consensus 9 ~~~~l~lfdvdgtLt~~r~~~~~e~~~~l~~lr~~-----v~ig~VggsDl~k~~eql---G~~Vl~~fDY~F~ENGl~~ 80 (252)
T KOG3189|consen 9 DEETLCLFDVDGTLTPPRQKVTPEMLEFLQKLRKK-----VTIGFVGGSDLSKQQEQL---GDNVLEEFDYVFSENGLVA 80 (252)
T ss_pred CCceEEEEecCCccccccccCCHHHHHHHHHHhhh-----eEEEEeecHHHHHHHHHh---chhHHhhhcccccCCCeeE
Confidence 345689999999996 67889999999998874 677778887776555544 4322 46899999999988
Q ss_pred EeccCCCCCCCccccccchhhcccccchhhHHHHHH---H-hhhcccccccccccccccccccccCcceEEEEecCCC--
Q 001541 848 YYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLV---R-WASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPG-- 921 (1057)
Q Consensus 848 ~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~-- 921 (1057)
|..+ .....+....|+. .+.+++++. + +.......+. ..+++....+ ..++-.-++..
T Consensus 81 yk~g------k~~~~Qsi~~~LG----ee~~q~liNF~LrYlsdidlPiKR----GtFiEFRNgM--iNvsPIGR~cs~E 144 (252)
T KOG3189|consen 81 YKGG------KLLSKQSIINHLG----EEKLQELINFCLRYLSDIDLPIKR----GTFIEFRNGM--INVSPIGRNCSQE 144 (252)
T ss_pred eeCC------cchhHHHHHHHHh----HHHHHHHHHHHHHHHHhcCCcccc----cceEEecCCc--eeccccccccCHH
Confidence 8664 2222223233332 222333221 1 1211111110 1111111110 00000001110
Q ss_pred ---------CCc-cHHHHHHHHHHhcCcEEEEEeeCCe-eEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecC----CC
Q 001541 922 ---------MTP-PVKELRKVLRIQALRCHVIYCQNGS-RINVIPVLASRSQALRYLYLRWGVELSKMVVFVGE----SG 986 (1057)
Q Consensus 922 ---------~~~-~~~el~~~l~~~~~~~~v~~s~~~~-~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD----~~ 986 (1057)
... .-+.+-+.|+.......+++|-++. .+||.|.|-.|---|++|-.. |++ .|-|||| ++
T Consensus 145 ER~eF~e~Dkk~~iR~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d-gf~---~IhFFGDkT~~GG 220 (252)
T KOG3189|consen 145 ERNEFEELDKKHKIREKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD-GFD---TIHFFGDKTMPGG 220 (252)
T ss_pred HHHHHHHhhhhhhhHHHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc-CCc---eEEEeccccCCCC
Confidence 000 0112233344444455666776543 699999999999999999876 776 7788998 46
Q ss_pred CCCccccccC
Q 001541 987 DTDYEGLLGG 996 (1057)
Q Consensus 987 n~D~~eML~~ 996 (1057)
| | .|.+.-
T Consensus 221 N-D-yEIf~d 228 (252)
T KOG3189|consen 221 N-D-YEIFAD 228 (252)
T ss_pred C-c-ceeeeC
Confidence 7 8 677753
No 167
>PLN02448 UDP-glycosyltransferase family protein
Probab=98.11 E-value=0.002 Score=77.28 Aligned_cols=140 Identities=9% Similarity=0.040 Sum_probs=81.6
Q ss_pred CCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001541 474 RKPVILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 551 (1057)
Q Consensus 474 ~~~~Il~vGRl~~--~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~ 551 (1057)
+..++++.|.... .+-+..++++++... ..+.+++ ..+. . .+.... .+++.+.++
T Consensus 274 ~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~-----~~~lw~~-~~~~-~-----------~~~~~~-----~~~~~v~~w 330 (459)
T PLN02448 274 GSVLYVSLGSFLSVSSAQMDEIAAGLRDSG-----VRFLWVA-RGEA-S-----------RLKEIC-----GDMGLVVPW 330 (459)
T ss_pred CceEEEeecccccCCHHHHHHHHHHHHhCC-----CCEEEEE-cCch-h-----------hHhHhc-----cCCEEEecc
Confidence 3457788887632 233666777777652 2332333 2221 0 011111 135677789
Q ss_pred CCCCcHHHHHHHhhcCCcE--EEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hhhhhc-CCceEEeCC-------
Q 001541 552 HKQSDVPEIYRLAAKTKGV--FINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----VDIHRV-LDNGLLVDP------- 617 (1057)
Q Consensus 552 v~~~dl~~ly~~Aa~~~dv--~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~----~eiv~~-~~~Gllv~p------- 617 (1057)
+|+.+ ++..+ .+ ||. -+--.+++||+++|+|+|+-...+- ...+.+ .+.|+-+..
T Consensus 331 ~pQ~~---iL~h~----~v~~fvt----HgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~ 399 (459)
T PLN02448 331 CDQLK---VLCHS----SVGGFWT----HCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETL 399 (459)
T ss_pred CCHHH---HhccC----ccceEEe----cCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCc
Confidence 88775 45455 44 542 2334688999999999999876542 223332 245766631
Q ss_pred CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHH
Q 001541 618 HDQQSVADALLKLVADK-QLWARCRQNGLKN 647 (1057)
Q Consensus 618 ~d~~~la~aI~~ll~d~-~~~~~~~~~~~~~ 647 (1057)
-+.+++++++++++.++ ++.+++++++.+.
T Consensus 400 ~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~ 430 (459)
T PLN02448 400 VGREEIAELVKRFMDLESEEGKEMRRRAKEL 430 (459)
T ss_pred CcHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 36799999999999864 4445555555543
No 168
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.06 E-value=6.6e-05 Score=86.43 Aligned_cols=272 Identities=14% Similarity=0.173 Sum_probs=140.2
Q ss_pred CcceEEEEcCC-CchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEe
Q 001541 305 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 383 (1057)
Q Consensus 305 ~~pDvIh~h~~-~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~ 383 (1057)
.+||+|..+.= ...+.+++.+..+++|+++---++-.... ..|. ... ..|. .+-+-|+..++
T Consensus 66 ~~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaGlRs~d~----~~g~-----~de---~~R~-----~i~~la~lhf~ 128 (346)
T PF02350_consen 66 EKPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAGLRSGDR----TEGM-----PDE---INRH-----AIDKLAHLHFA 128 (346)
T ss_dssp HT-SEEEEETTSHHHHHHHHHHHHTT-EEEEES-----S-T----TSST-----THH---HHHH-----HHHHH-SEEEE
T ss_pred cCCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCCCCcccc----CCCC-----chh---hhhh-----hhhhhhhhhcc
Confidence 57999999874 56677788888999996654444211100 0011 111 1222 24566899999
Q ss_pred cCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCC-CCCCCcCCCCCCCCCCCCCCCCCCCCCCCch
Q 001541 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPG-MEFHHIVPQDGDMDGETEGNEDNPASPDPPI 462 (1057)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnG-iD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~ 462 (1057)
+|+...+.+.+ .|....+|.++-+. +|.-...... ..+.
T Consensus 129 ~t~~~~~~L~~-----------------------~G~~~~rI~~vG~~~~D~l~~~~~~----------------~~~~- 168 (346)
T PF02350_consen 129 PTEEARERLLQ-----------------------EGEPPERIFVVGNPGIDALLQNKEE----------------IEEK- 168 (346)
T ss_dssp SSHHHHHHHHH-----------------------TT--GGGEEE---HHHHHHHHHHHT----------------TCC--
T ss_pred CCHHHHHHHHh-----------------------cCCCCCeEEEEChHHHHHHHHhHHH----------------Hhhh-
Confidence 99987776644 23344588888763 4432111000 0000
Q ss_pred HHHHHhhhCCCCCcEEEEEe-CCCC---CCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHH
Q 001541 463 WSEIMRFFTNPRKPVILALA-RPDP---KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLID 538 (1057)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vG-Rl~~---~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~ 538 (1057)
.. ...+.....++++|..- |... ......+.+++..+.+. ....+++.+.+-| .....+.+.+.
T Consensus 169 ~~-~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p----------~~~~~i~~~l~ 236 (346)
T PF02350_consen 169 YK-NSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER-QNVPVIFPLHNNP----------RGSDIIIEKLK 236 (346)
T ss_dssp HH-HHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEEEEEE--S-H----------HHHHHHHHHHT
T ss_pred hh-hHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCCcEEEEecCCc----------hHHHHHHHHhc
Confidence 00 11121124556655554 3332 23466777777777653 2223333444322 23455555555
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHH-HHHHcCCcEEEcCC-CCchhhhhcCCceEEeC
Q 001541 539 KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLI-EAAAHGLPIVATKN-GGPVDIHRVLDNGLLVD 616 (1057)
Q Consensus 539 ~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~l-EAmA~G~PVVat~~-Gg~~eiv~~~~~Gllv~ 616 (1057)
++ +++.+..+++..++..+++.| +++|--| | .+. ||..+|+|+|.-.. |--++.+..+.+ .+|.
T Consensus 237 ~~---~~v~~~~~l~~~~~l~ll~~a----~~vvgdS-----s-GI~eEa~~lg~P~v~iR~~geRqe~r~~~~n-vlv~ 302 (346)
T PF02350_consen 237 KY---DNVRLIEPLGYEEYLSLLKNA----DLVVGDS-----S-GIQEEAPSLGKPVVNIRDSGERQEGRERGSN-VLVG 302 (346)
T ss_dssp T----TTEEEE----HHHHHHHHHHE----SEEEESS-----H-HHHHHGGGGT--EEECSSS-S-HHHHHTTSE-EEET
T ss_pred cc---CCEEEECCCCHHHHHHHHhcc----eEEEEcC-----c-cHHHHHHHhCCeEEEecCCCCCHHHHhhcce-EEeC
Confidence 55 389999999999999999999 7776333 5 666 99999999999864 444566555544 4475
Q ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 001541 617 PHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRI 664 (1057)
Q Consensus 617 p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~ 664 (1057)
.|.+++.++|.+++.+++.+..+.. ...-|.=...++++.+++
T Consensus 303 -~~~~~I~~ai~~~l~~~~~~~~~~~----~~npYgdG~as~rI~~~L 345 (346)
T PF02350_consen 303 -TDPEAIIQAIEKALSDKDFYRKLKN----RPNPYGDGNASERIVEIL 345 (346)
T ss_dssp -SSHHHHHHHHHHHHH-HHHHHHHHC----S--TT-SS-HHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHhChHHHHhhcc----CCCCCCCCcHHHHHHHhh
Confidence 7999999999999998554443321 112444445555555554
No 169
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.04 E-value=6.7e-06 Score=80.47 Aligned_cols=55 Identities=15% Similarity=0.136 Sum_probs=45.1
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCCchhhhhhhhhcC
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANR 1018 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~~~~~~~~~a~~ 1018 (1057)
+|-.+...|++++++.++++.. +||+-+ | +++|+.+|+++|+.+|. .+.+.++++
T Consensus 83 dK~~a~~~L~~~~~l~~e~~ay-iGDD~~-D-lpvm~~vGls~a~~dAh--~~v~~~a~~ 137 (170)
T COG1778 83 DKLAAFEELLKKLNLDPEEVAY-VGDDLV-D-LPVMEKVGLSVAVADAH--PLLKQRADY 137 (170)
T ss_pred hHHHHHHHHHHHhCCCHHHhhh-hcCccc-c-HHHHHHcCCcccccccC--HHHHHhhHh
Confidence 3777888999999999999966 777777 7 99999999999999999 444444444
No 170
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.04 E-value=0.0015 Score=74.27 Aligned_cols=66 Identities=23% Similarity=0.238 Sum_probs=49.3
Q ss_pred cHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC---chhhhhcCCceEEeCCCCHHHHHHHHHHHHh
Q 001541 556 DVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG---PVDIHRVLDNGLLVDPHDQQSVADALLKLVA 632 (1057)
Q Consensus 556 dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg---~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~ 632 (1057)
+...++..| |++| -+-|....||+..|+|.|++..|- .-+.+. +.|+++.-.|++++.+.+.+.+.
T Consensus 241 d~~~Ll~~a----~l~I-----g~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~--~~Gll~~~~~~~ei~~~v~~~~~ 309 (335)
T PF04007_consen 241 DGLDLLYYA----DLVI-----GGGGTMAREAALLGTPAISCFPGKLLAVDKYLI--EKGLLYHSTDPDEIVEYVRKNLG 309 (335)
T ss_pred CHHHHHHhc----CEEE-----eCCcHHHHHHHHhCCCEEEecCCcchhHHHHHH--HCCCeEecCCHHHHHHHHHHhhh
Confidence 666888889 8988 344677899999999999987553 323333 35888888899999987766544
No 171
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=97.91 E-value=2.7e-05 Score=75.52 Aligned_cols=60 Identities=15% Similarity=0.176 Sum_probs=45.9
Q ss_pred eEEEEEecCCCCC---------cchHHHHHHHHHHHhhhcCCCeEEEEECCCCHH---------------HHHHHHHhCC
Q 001541 775 HIFVISVDCDSTT---------GLLDATKKICEAVEKERTEGSIGFILSTSMTIS---------------EIHSFLVSGH 830 (1057)
Q Consensus 775 kLi~~DiDGTL~~---------~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~---------------~i~~~l~~lg 830 (1057)
|+|++|+||||.. .+.+.++++|++++++ |+.|+++|||+.. .+..||...+
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~----G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ 77 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKAL----GFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHN 77 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHC----CCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcC
Confidence 6899999999931 1446778888888776 8999999999876 4467888888
Q ss_pred CCCCCCCeEEe
Q 001541 831 LSPSDFDAFIC 841 (1057)
Q Consensus 831 l~~~~~D~lI~ 841 (1057)
++ +|-++.
T Consensus 78 ip---Yd~l~~ 85 (126)
T TIGR01689 78 VP---YDEIYV 85 (126)
T ss_pred CC---CceEEe
Confidence 85 454443
No 172
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.91 E-value=8e-05 Score=87.39 Aligned_cols=185 Identities=12% Similarity=0.074 Sum_probs=118.6
Q ss_pred HHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCC
Q 001541 463 WSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDL 542 (1057)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l 542 (1057)
...+..++++.+..++++..++ .|=-+..++++.++.+. .|+-+|++...+.. -...+.+.+.+.|+
T Consensus 273 ~~~R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~--vP~S~L~L~~~~~~---------~~~~l~~~~~~~Gv 339 (468)
T PF13844_consen 273 VTTRAQYGLPEDAVVFGSFNNL--FKISPETLDLWARILKA--VPNSRLWLLRFPAS---------GEARLRRRFAAHGV 339 (468)
T ss_dssp EEETGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHHHHH--STTEEEEEEETSTT---------HHHHHHHHHHHTTS
T ss_pred ccCHHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHHHHh--CCCcEEEEeeCCHH---------HHHHHHHHHHHcCC
Confidence 3445667777777777777776 57778899999998754 45555544333321 13567888888888
Q ss_pred C-CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCch-----hhhhc-CCceEEe
Q 001541 543 Y-GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPV-----DIHRV-LDNGLLV 615 (1057)
Q Consensus 543 ~-~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~-----eiv~~-~~~Gllv 615 (1057)
. +++.|.+..+.++....|+.+ ||++=|..+ +-+.+.+||+.+|+|||+-.-.... .++.. |-.-++.
T Consensus 340 ~~~Ri~f~~~~~~~ehl~~~~~~----DI~LDT~p~-nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA 414 (468)
T PF13844_consen 340 DPDRIIFSPVAPREEHLRRYQLA----DICLDTFPY-NGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIA 414 (468)
T ss_dssp -GGGEEEEE---HHHHHHHGGG-----SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-
T ss_pred ChhhEEEcCCCCHHHHHHHhhhC----CEEeeCCCC-CCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcC
Confidence 6 579999988888888888889 999987533 3478999999999999985422211 12221 2223344
Q ss_pred CCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-h--cCCHHHHHHHHHHHHHcc
Q 001541 616 DPHDQQSVADALLKLVADKQLWARCRQNGLKNI-H--LFSWPEHCKTYLSRIAGC 667 (1057)
Q Consensus 616 ~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~--~fsw~~~a~~~l~~~~~~ 667 (1057)
. |.++..+.-.++..|++.++++++..++.. + -|+-..+++.+.+.|+.+
T Consensus 415 ~--s~~eYv~~Av~La~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m 467 (468)
T PF13844_consen 415 D--SEEEYVEIAVRLATDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM 467 (468)
T ss_dssp S--SHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred C--CHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence 4 899999999999999999999999998876 3 699999999999999764
No 173
>PLN02208 glycosyltransferase family protein
Probab=97.90 E-value=0.04 Score=65.58 Aligned_cols=94 Identities=14% Similarity=0.031 Sum_probs=61.7
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhh-hhcCCceEEeCC--
Q 001541 545 QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDI-HRVLDNGLLVDP-- 617 (1057)
Q Consensus 545 ~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~ei-v~~~~~Gllv~p-- 617 (1057)
++...++.||.+ +++.. .+-++-+ -+--++++||+++|+|+|+-..-+ ...+ ++..+.|+.++.
T Consensus 312 g~~v~~W~PQ~~---iL~H~----~v~~Fvt--HcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~ 382 (442)
T PLN02208 312 GVVWGGWVQQPL---ILDHP----SIGCFVN--HCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREK 382 (442)
T ss_pred CcEeeccCCHHH---HhcCC----ccCeEEc--cCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecccc
Confidence 466778988885 55555 3422222 233367899999999999976533 2222 233456777754
Q ss_pred ---CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHH
Q 001541 618 ---HDQQSVADALLKLVADK-QLWARCRQNGLKN 647 (1057)
Q Consensus 618 ---~d~~~la~aI~~ll~d~-~~~~~~~~~~~~~ 647 (1057)
-+.++++++|.++++++ +..+++++++.+.
T Consensus 383 ~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~ 416 (442)
T PLN02208 383 TGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKL 416 (442)
T ss_pred CCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 36789999999999865 4556666666554
No 174
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.89 E-value=3.3e-05 Score=84.57 Aligned_cols=73 Identities=14% Similarity=0.092 Sum_probs=58.7
Q ss_pred CcceEEEEEecCCC-C--Ccc---hHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCc
Q 001541 772 RRKHIFVISVDCDS-T--TGL---LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGS 845 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL-~--~~i---~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa 845 (1057)
-..++||||||||| + +.+ ++.+.++|++|+++ |+.++|+|+++...+...++.+|+. .-||.+ +++|.
T Consensus 124 ~~~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~Lkek----GikLaIaTS~~Re~v~~~L~~lGLd-~YFdvI-Is~Gd 197 (301)
T TIGR01684 124 EPPHVVVFDLDSTLITDEEPVRIRDPRIYDSLTELKKR----GCILVLWSYGDRDHVVESMRKVKLD-RYFDII-ISGGH 197 (301)
T ss_pred ccceEEEEecCCCCcCCCCccccCCHHHHHHHHHHHHC----CCEEEEEECCCHHHHHHHHHHcCCC-cccCEE-EECCc
Confidence 45689999999999 2 333 58999999999997 9999999999999999999999995 234544 55677
Q ss_pred EEEec
Q 001541 846 DLYYS 850 (1057)
Q Consensus 846 ~I~~~ 850 (1057)
.....
T Consensus 198 v~~~k 202 (301)
T TIGR01684 198 KAEEY 202 (301)
T ss_pred cccCC
Confidence 66543
No 175
>PLN03007 UDP-glucosyltransferase family protein
Probab=97.84 E-value=0.094 Score=63.39 Aligned_cols=146 Identities=14% Similarity=0.205 Sum_probs=80.5
Q ss_pred HHhhhCC--CCCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcC
Q 001541 466 IMRFFTN--PRKPVILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYD 541 (1057)
Q Consensus 466 ~~~~~~~--~~~~~Il~vGRl~~--~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~ 541 (1057)
...++.. ++..+++++|.... .+.+..++++++.+. ..+.++++......... ..+-+.+...+.
T Consensus 275 ~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~-----~~flw~~~~~~~~~~~~---~~lp~~~~~r~~--- 343 (482)
T PLN03007 275 CLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSG-----QNFIWVVRKNENQGEKE---EWLPEGFEERTK--- 343 (482)
T ss_pred HHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHHHHCC-----CCEEEEEecCCcccchh---hcCCHHHHHHhc---
Confidence 4444432 34467888887643 345666666666552 24545666421110000 000011111111
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcE--EEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCch----hhh-hcCCceEE
Q 001541 542 LYGQVAYPKHHKQSDVPEIYRLAAKTKGV--FINPAFIEPFGLTLIEAAAHGLPIVATKNGGPV----DIH-RVLDNGLL 614 (1057)
Q Consensus 542 l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv--~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~----eiv-~~~~~Gll 614 (1057)
..++...+++|+. +++..+ ++ ||. -+--++++||+++|+|+|+....+=. ..+ +....|+-
T Consensus 344 -~~g~~v~~w~PQ~---~iL~h~----~v~~fvt----H~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~ 411 (482)
T PLN03007 344 -GKGLIIRGWAPQV---LILDHQ----ATGGFVT----HCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVS 411 (482)
T ss_pred -cCCEEEecCCCHH---HHhccC----ccceeee----cCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeE
Confidence 2467888998886 566666 44 442 12245889999999999998754321 111 11133443
Q ss_pred eC----------CCCHHHHHHHHHHHHhCH
Q 001541 615 VD----------PHDQQSVADALLKLVADK 634 (1057)
Q Consensus 615 v~----------p~d~~~la~aI~~ll~d~ 634 (1057)
+. .-+.++++++|++++.++
T Consensus 412 ~~~~~~~~~~~~~~~~~~l~~av~~~m~~~ 441 (482)
T PLN03007 412 VGAKKLVKVKGDFISREKVEKAVREVIVGE 441 (482)
T ss_pred eccccccccccCcccHHHHHHHHHHHhcCc
Confidence 31 136889999999999875
No 176
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=97.82 E-value=0.0021 Score=75.63 Aligned_cols=114 Identities=15% Similarity=0.082 Sum_probs=79.3
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhhhcCCceEEeC
Q 001541 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRVLDNGLLVD 616 (1057)
Q Consensus 541 ~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv~~~~~Gllv~ 616 (1057)
++..++...+++|+. +++..| |++|.. |-..++.||+.+|+|+|+-..+. ..+.++..+.|....
T Consensus 281 ~~p~n~~v~~~~p~~---~~l~~a----d~vI~h----GG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~ 349 (406)
T COG1819 281 NVPDNVIVADYVPQL---ELLPRA----DAVIHH----GGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALP 349 (406)
T ss_pred cCCCceEEecCCCHH---HHhhhc----CEEEec----CCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecC
Confidence 556788888888766 588899 999965 34467889999999999977654 334556667787776
Q ss_pred --CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 001541 617 --PHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 617 --p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~ 665 (1057)
+.+.+.++++|.++|+++..++...+........-.....++.+.+.+.
T Consensus 350 ~~~l~~~~l~~av~~vL~~~~~~~~~~~~~~~~~~~~g~~~~a~~le~~~~ 400 (406)
T COG1819 350 FEELTEERLRAAVNEVLADDSYRRAAERLAEEFKEEDGPAKAADLLEEFAR 400 (406)
T ss_pred cccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHh
Confidence 6899999999999999987555444433333344443334444433343
No 177
>PRK10444 UMP phosphatase; Provisional
Probab=97.82 E-value=0.00026 Score=77.59 Aligned_cols=63 Identities=6% Similarity=0.063 Sum_probs=49.2
Q ss_pred eEEEEEecCCC--CCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHH---HHHHhCCCCCCCCCeEEeC
Q 001541 775 HIFVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIH---SFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 775 kLi~~DiDGTL--~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~---~~l~~lgl~~~~~D~lI~~ 842 (1057)
|+|+||+|||| ...+.+.+.++|++|+++ |+.|+++|+|+..... +.|..+|++. +.+-++++
T Consensus 2 ~~v~~DlDGtL~~~~~~~p~a~~~l~~L~~~----g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~-~~~~i~ts 69 (248)
T PRK10444 2 KNVICDIDGVLMHDNVAVPGAAEFLHRILDK----GLPLVLLTNYPSQTGQDLANRFATAGVDV-PDSVFYTS 69 (248)
T ss_pred cEEEEeCCCceEeCCeeCccHHHHHHHHHHC----CCeEEEEeCCCCCCHHHHHHHHHHcCCCC-CHhhEecH
Confidence 68999999999 356778999999999987 8999999999886554 4456678853 34556665
No 178
>PLN02670 transferase, transferring glycosyl groups
Probab=97.77 E-value=0.087 Score=63.13 Aligned_cols=185 Identities=12% Similarity=0.105 Sum_probs=104.2
Q ss_pred HHHHHhhhCCC--CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHH
Q 001541 463 WSEIMRFFTNP--RKPVILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLID 538 (1057)
Q Consensus 463 ~~~~~~~~~~~--~~~~Il~vGRl~--~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~ 538 (1057)
|.+..+++-.. ...+.+++|.+. +.+-+..+..+++.+. . .+..++....... ......+-.....
T Consensus 265 ~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~----~-~FlWv~r~~~~~~--~~~~~~lp~~f~~--- 334 (472)
T PLN02670 265 WVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSE----T-PFFWVLRNEPGTT--QNALEMLPDGFEE--- 334 (472)
T ss_pred hHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCC----C-CEEEEEcCCcccc--cchhhcCChHHHH---
Confidence 45566666443 456677788764 3455667777777663 1 3433444211100 0000000111111
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhhhcCCceEE
Q 001541 539 KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRVLDNGLL 614 (1057)
Q Consensus 539 ~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv~~~~~Gll 614 (1057)
+..-. -+.+.+++||.+ +++..+ .+.||. -+--++++||+++|+|+|+....+ ....+...+.|+.
T Consensus 335 ~~~~r-G~vv~~W~PQ~~---IL~H~~--v~~Fvt----HcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~ 404 (472)
T PLN02670 335 RVKGR-GMIHVGWVPQVK---ILSHES--VGGFLT----HCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLE 404 (472)
T ss_pred hccCC-CeEEeCcCCHHH---HhcCcc--cceeee----cCCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEE
Confidence 11111 266678988875 555541 023542 233468999999999999977543 2233444577887
Q ss_pred eCC------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh----hcCCHHHHHHHHHHHHHccc
Q 001541 615 VDP------HDQQSVADALLKLVADKQLWARCRQNGLKNI----HLFSWPEHCKTYLSRIAGCK 668 (1057)
Q Consensus 615 v~p------~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v----~~fsw~~~a~~~l~~~~~~~ 668 (1057)
++. -+.++++++|.+++.+++ -.++++++++.. ..=.-.+.++.+++.+.+..
T Consensus 405 l~~~~~~~~~~~e~i~~av~~vm~~~~-g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~~ 467 (472)
T PLN02670 405 VPRDERDGSFTSDSVAESVRLAMVDDA-GEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLRENR 467 (472)
T ss_pred eeccccCCcCcHHHHHHHHHHHhcCcc-hHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHhc
Confidence 753 358999999999998742 234455554443 35566777777777777654
No 179
>PLN02562 UDP-glycosyltransferase
Probab=97.71 E-value=0.038 Score=66.03 Aligned_cols=138 Identities=13% Similarity=0.123 Sum_probs=81.9
Q ss_pred CcEEEEEeCCC---CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001541 475 KPVILALARPD---PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 551 (1057)
Q Consensus 475 ~~~Il~vGRl~---~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~ 551 (1057)
..++++.|... +.+-+..++.+++.+. . .+..++..+.. ..+.+ ... ++. .+++...++
T Consensus 274 svvyvsfGS~~~~~~~~~~~~l~~~l~~~g----~-~fiW~~~~~~~-~~l~~-------~~~---~~~--~~~~~v~~w 335 (448)
T PLN02562 274 SVIYISFGSWVSPIGESNVRTLALALEASG----R-PFIWVLNPVWR-EGLPP-------GYV---ERV--SKQGKVVSW 335 (448)
T ss_pred ceEEEEecccccCCCHHHHHHHHHHHHHCC----C-CEEEEEcCCch-hhCCH-------HHH---HHh--ccCEEEEec
Confidence 45778888853 4456777778877763 1 33334432110 01111 111 111 246777789
Q ss_pred CCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhhhc-CCceEEeCCCCHHHHHHH
Q 001541 552 HKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRV-LDNGLLVDPHDQQSVADA 626 (1057)
Q Consensus 552 v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv~~-~~~Gllv~p~d~~~la~a 626 (1057)
+|+.+ ++...+ .++||. -+--.+++||+.+|+|+|+....+ ....+.+ .+.|+-+..-+.++++++
T Consensus 336 ~PQ~~---iL~h~~--v~~fvt----H~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~l~~~ 406 (448)
T PLN02562 336 APQLE---VLKHQA--VGCYLT----HCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFGQKEVEEG 406 (448)
T ss_pred CCHHH---HhCCCc--cceEEe----cCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCCHHHHHHH
Confidence 88875 555540 034441 233468999999999999977544 2223322 356777755688999999
Q ss_pred HHHHHhCHHHHHH
Q 001541 627 LLKLVADKQLWAR 639 (1057)
Q Consensus 627 I~~ll~d~~~~~~ 639 (1057)
|++++.+++.+++
T Consensus 407 v~~~l~~~~~r~~ 419 (448)
T PLN02562 407 LRKVMEDSGMGER 419 (448)
T ss_pred HHHHhCCHHHHHH
Confidence 9999988654433
No 180
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=97.68 E-value=0.00038 Score=73.42 Aligned_cols=45 Identities=20% Similarity=0.259 Sum_probs=41.2
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCC
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGI 1006 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa 1006 (1057)
+|+.+++.+++++|++++++++ +||+.+ | ++|++.+|.++|+...
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~-iGDs~~-D-~~~a~~ag~~~a~~~~ 191 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVA-VGDSKN-D-LPMFEVADISISLGDE 191 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEE-EcCCHh-H-HHHHHhcCCeEEECCC
Confidence 6999999999999999999988 889988 8 9999999999999643
No 181
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=97.67 E-value=0.002 Score=75.67 Aligned_cols=178 Identities=14% Similarity=0.125 Sum_probs=124.2
Q ss_pred hCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHcCCC-CCEE
Q 001541 470 FTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY-GQVA 547 (1057)
Q Consensus 470 ~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~-~~V~ 547 (1057)
+++++..++++.++ +.|-.+.+++-+-++.. .-|+-+ ++.|++++ .++...++.++++.|+. .+..
T Consensus 425 glp~~avVf~c~~n--~~K~~pev~~~wmqIL~--~vP~Svl~L~~~~~~--------~~~~~~l~~la~~~Gv~~eRL~ 492 (620)
T COG3914 425 GLPEDAVVFCCFNN--YFKITPEVFALWMQILS--AVPNSVLLLKAGGDD--------AEINARLRDLAEREGVDSERLR 492 (620)
T ss_pred CCCCCeEEEEecCC--cccCCHHHHHHHHHHHH--hCCCcEEEEecCCCc--------HHHHHHHHHHHHHcCCChhhee
Confidence 34455555555554 46777777777777753 345444 45566654 56789999999999885 5799
Q ss_pred eCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEc-------CCCCchhhhhc-CCceEEeCCCC
Q 001541 548 YPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT-------KNGGPVDIHRV-LDNGLLVDPHD 619 (1057)
Q Consensus 548 f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat-------~~Gg~~eiv~~-~~~Gllv~p~d 619 (1057)
|.+..+.++-.+.|..| |+++=|--+ |-..|.+||+.+|+|||+- .+|+. ++.+ |-.-++++ +
T Consensus 493 f~p~~~~~~h~a~~~iA----DlvLDTyPY-~g~TTa~daLwm~vPVlT~~G~~FasR~~~s--i~~~agi~e~vA~--s 563 (620)
T COG3914 493 FLPPAPNEDHRARYGIA----DLVLDTYPY-GGHTTASDALWMGVPVLTRVGEQFASRNGAS--IATNAGIPELVAD--S 563 (620)
T ss_pred ecCCCCCHHHHHhhchh----heeeecccC-CCccchHHHHHhcCceeeeccHHHHHhhhHH--HHHhcCCchhhcC--C
Confidence 99999999999999999 998866422 3457899999999999972 34432 2322 22223443 5
Q ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHh-h--cCCHHHHHHHHHHHHHccc
Q 001541 620 QQSVADALLKLVADKQLWARCRQNGLKNI-H--LFSWPEHCKTYLSRIAGCK 668 (1057)
Q Consensus 620 ~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~--~fsw~~~a~~~l~~~~~~~ 668 (1057)
.++..+.-..+-.|..++++.+..-.+.. . -|+.+..++++..+|..+-
T Consensus 564 ~~dYV~~av~~g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~ 615 (620)
T COG3914 564 RADYVEKAVAFGSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMW 615 (620)
T ss_pred HHHHHHHHHHhcccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHH
Confidence 55555555555567777877777666665 2 6999999999999998764
No 182
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.63 E-value=0.00015 Score=79.53 Aligned_cols=74 Identities=15% Similarity=0.153 Sum_probs=59.2
Q ss_pred cCcceEEEEEecCCCC---Ccc---hHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCC
Q 001541 771 RRRKHIFVISVDCDST---TGL---LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSG 844 (1057)
Q Consensus 771 ~~~kkLi~~DiDGTL~---~~i---~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nG 844 (1057)
....|+|+|||||||. ..+ ++.+.++|++|+++ |+.++|+|+.+...+...++.+|+. .-||.+|| +|
T Consensus 125 ~~~~~~i~~D~D~TL~~~~~~v~irdp~V~EtL~eLkek----GikLaIvTNg~Re~v~~~Le~lgL~-~yFDvII~-~g 198 (303)
T PHA03398 125 WEIPHVIVFDLDSTLITDEEPVRIRDPFVYDSLDELKER----GCVLVLWSYGNREHVVHSLKETKLE-GYFDIIIC-GG 198 (303)
T ss_pred eeeccEEEEecCCCccCCCCccccCChhHHHHHHHHHHC----CCEEEEEcCCChHHHHHHHHHcCCC-ccccEEEE-CC
Confidence 5667999999999993 445 68899999999997 9999999988888889999999995 23455544 66
Q ss_pred cEEEec
Q 001541 845 SDLYYS 850 (1057)
Q Consensus 845 a~I~~~ 850 (1057)
......
T Consensus 199 ~i~~k~ 204 (303)
T PHA03398 199 RKAGEY 204 (303)
T ss_pred Cccccc
Confidence 666544
No 183
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=97.58 E-value=0.18 Score=59.66 Aligned_cols=91 Identities=10% Similarity=0.092 Sum_probs=57.8
Q ss_pred CCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCC-CCchhhhhcCC-ceEEeC--CCCHHHHH
Q 001541 549 PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN-GGPVDIHRVLD-NGLLVD--PHDQQSVA 624 (1057)
Q Consensus 549 ~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~-Gg~~eiv~~~~-~Gllv~--p~d~~~la 624 (1057)
....+..++..+++.| |++|-.-++ .++=|++.|+|+|+-.. .-...+++..+ ..++++ .-+.+++.
T Consensus 313 ~~~~~~~e~~~iIs~~----dl~ig~RlH-----a~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~~~~~~~~~~l~~~~Li 383 (426)
T PRK10017 313 MDELNDLEMGKILGAC----ELTVGTRLH-----SAIISMNFGTPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQ 383 (426)
T ss_pred cCCCChHHHHHHHhhC----CEEEEecch-----HHHHHHHcCCCEEEeeehHHHHHHHHHcCCccEEechhhCCHHHHH
Confidence 3444456888999999 998855332 46788999999999653 11222332221 223343 34578899
Q ss_pred HHHHHHHhCHHHHHHHHHHHHHHh
Q 001541 625 DALLKLVADKQLWARCRQNGLKNI 648 (1057)
Q Consensus 625 ~aI~~ll~d~~~~~~~~~~~~~~v 648 (1057)
+.+.+++++.+..++.-+......
T Consensus 384 ~~v~~~~~~r~~~~~~l~~~v~~~ 407 (426)
T PRK10017 384 AMVADTLGQLPALNARLAEAVSRE 407 (426)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHH
Confidence 999999998876655444443333
No 184
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=97.54 E-value=0.21 Score=59.66 Aligned_cols=93 Identities=17% Similarity=0.233 Sum_probs=58.2
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhhhcC-CceEEe-CC
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRVL-DNGLLV-DP 617 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv~~~-~~Gllv-~p 617 (1057)
++....+++|+.+ ++...+ .+.||.- +--++++||+++|+|+|+....+ ....+.+. +.|+.+ ..
T Consensus 324 ~~g~v~~w~PQ~~---iL~h~~--v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~ 394 (451)
T PLN02410 324 GRGYIVKWAPQKE---VLSHPA--VGGFWSH----CGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGD 394 (451)
T ss_pred CCeEEEccCCHHH---HhCCCc--cCeeeec----CchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCc
Confidence 4556668988885 555531 0446632 22357899999999999976543 22222222 567666 33
Q ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 001541 618 HDQQSVADALLKLVADKQLWARCRQNGLK 646 (1057)
Q Consensus 618 ~d~~~la~aI~~ll~d~~~~~~~~~~~~~ 646 (1057)
-+.++++++|++++.+++ .+++++++++
T Consensus 395 ~~~~~v~~av~~lm~~~~-~~~~r~~a~~ 422 (451)
T PLN02410 395 LDRGAVERAVKRLMVEEE-GEEMRKRAIS 422 (451)
T ss_pred ccHHHHHHHHHHHHcCCc-HHHHHHHHHH
Confidence 478999999999998754 3344444443
No 185
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=97.54 E-value=0.4 Score=57.78 Aligned_cols=147 Identities=13% Similarity=0.151 Sum_probs=80.0
Q ss_pred HHHhhhCCC--CCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHc
Q 001541 465 EIMRFFTNP--RKPVILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY 540 (1057)
Q Consensus 465 ~~~~~~~~~--~~~~Il~vGRl~~--~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~ 540 (1057)
+...++... ...+.++.|.+.. .+-+..++++++... ..+.++++........ ...+...+.+.+.
T Consensus 272 ~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~-----~~flw~~~~~~~~~~~---~~~lp~~~~~r~~-- 341 (477)
T PLN02863 272 DVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSG-----VHFIWCVKEPVNEESD---YSNIPSGFEDRVA-- 341 (477)
T ss_pred HHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCC-----CcEEEEECCCcccccc---hhhCCHHHHHHhc--
Confidence 344555332 3456778887642 233666777776552 2444566532211000 0001111211111
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhh-hhcCCceEEe
Q 001541 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDI-HRVLDNGLLV 615 (1057)
Q Consensus 541 ~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~ei-v~~~~~Gllv 615 (1057)
...+...+++|+. +++...+ .++||. -+--.+++||+++|+|+|+-...+ .... ++..+.|+.+
T Consensus 342 --~~g~~v~~w~PQ~---~vL~h~~--v~~fvt----H~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~ 410 (477)
T PLN02863 342 --GRGLVIRGWAPQV---AILSHRA--VGAFLT----HCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRV 410 (477)
T ss_pred --cCCEEecCCCCHH---HHhcCCC--cCeEEe----cCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEe
Confidence 2357778998875 4565530 156662 233458899999999999976433 2222 3334667766
Q ss_pred CC-----CCHHHHHHHHHHHHh
Q 001541 616 DP-----HDQQSVADALLKLVA 632 (1057)
Q Consensus 616 ~p-----~d~~~la~aI~~ll~ 632 (1057)
.. -+.++++++|.+++.
T Consensus 411 ~~~~~~~~~~~~v~~~v~~~m~ 432 (477)
T PLN02863 411 CEGADTVPDSDELARVFMESVS 432 (477)
T ss_pred ccCCCCCcCHHHHHHHHHHHhh
Confidence 21 267899999999884
No 186
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=97.52 E-value=0.0045 Score=68.54 Aligned_cols=86 Identities=17% Similarity=0.130 Sum_probs=58.7
Q ss_pred cceEEEEcCC-CchHHHHHHHhcCCCCEEEEecCCch-hhHHHHHHhhhc--chHHHHHHHHHHHHHHHHHHHhhcCCEE
Q 001541 306 WPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGR-DKLEQLLKQARL--SRDEINATYKIMRRIEAEELSLDASEIV 381 (1057)
Q Consensus 306 ~pDvIh~h~~-~~~~~a~~l~~~~~iP~V~t~H~l~~-~~~~~l~~~g~~--~~~~~~~~yk~~~ri~~E~~~l~~ad~V 381 (1057)
+.||+|+... .+|.+|+.++...|+|+++|-|++.. +....+...... ....-..+.++++.+ -+.+++.||.|
T Consensus 172 ~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l--~~~~Y~~Ad~I 249 (268)
T PF11997_consen 172 KADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESL--SRLAYRAADRI 249 (268)
T ss_pred CCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHH--HHHHHHhhCee
Confidence 5799999875 78999999999999999999999865 333444444333 111111222333333 35689999999
Q ss_pred EecCHHHHHHHH
Q 001541 382 ITSTRQEIEEQW 393 (1057)
Q Consensus 382 i~~S~~~~~~~~ 393 (1057)
++.++.....|.
T Consensus 250 ~~l~~~n~~~q~ 261 (268)
T PF11997_consen 250 TPLYEYNREWQI 261 (268)
T ss_pred cccchhhHHHHH
Confidence 999887555543
No 187
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=97.51 E-value=0.00063 Score=73.02 Aligned_cols=43 Identities=16% Similarity=0.310 Sum_probs=39.7
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeC
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 1004 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMg 1004 (1057)
.|...++.+++++|++++++++ +||+.+ | ++|++.+|.+|+|+
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~-iGDs~~-D-i~aa~~ag~~i~~~ 194 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVA-VGDGAN-D-LSMIKAAGLGIAFN 194 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEE-EECCHH-H-HHHHHhCCCeEEeC
Confidence 4899999999999999999998 888887 8 99999999999995
No 188
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=97.46 E-value=0.38 Score=57.85 Aligned_cols=81 Identities=16% Similarity=0.184 Sum_probs=55.0
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhh-hcCCceEEeCC--
Q 001541 545 QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIH-RVLDNGLLVDP-- 617 (1057)
Q Consensus 545 ~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv-~~~~~Gllv~p-- 617 (1057)
.+.+.+++|+.+ ++...+ .+.||. -+--++++||+.+|+|+|+-...+ ....+ +..+.|+.++.
T Consensus 339 g~vv~~W~PQ~~---iL~h~~--vg~Fit----H~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~ 409 (481)
T PLN02992 339 GFVVPSWAPQAE---ILAHQA--VGGFLT----HCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPK 409 (481)
T ss_pred CEEEeecCCHHH---HhCCcc--cCeeEe----cCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCC
Confidence 477789988875 455551 023442 233468899999999999987544 22233 34566777743
Q ss_pred --CCHHHHHHHHHHHHhCH
Q 001541 618 --HDQQSVADALLKLVADK 634 (1057)
Q Consensus 618 --~d~~~la~aI~~ll~d~ 634 (1057)
-+.++++++|.+++.++
T Consensus 410 ~~~~~~~l~~av~~vm~~~ 428 (481)
T PLN02992 410 EVISRSKIEALVRKVMVEE 428 (481)
T ss_pred CcccHHHHHHHHHHHhcCC
Confidence 47799999999999763
No 189
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.35 E-value=0.014 Score=63.28 Aligned_cols=139 Identities=23% Similarity=0.366 Sum_probs=85.1
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCC
Q 001541 473 PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHH 552 (1057)
Q Consensus 473 ~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v 552 (1057)
+-+-+++++|.-|+ ||+. ++.+..+.+ ...++.+|+|...+. +..+.+.+.. ++++.++-.
T Consensus 157 ~~r~ilI~lGGsDp-k~lt--~kvl~~L~~--~~~nl~iV~gs~~p~----------l~~l~k~~~~---~~~i~~~~~- 217 (318)
T COG3980 157 PKRDILITLGGSDP-KNLT--LKVLAELEQ--KNVNLHIVVGSSNPT----------LKNLRKRAEK---YPNINLYID- 217 (318)
T ss_pred chheEEEEccCCCh-hhhH--HHHHHHhhc--cCeeEEEEecCCCcc----------hhHHHHHHhh---CCCeeeEec-
Confidence 34558889998776 4443 344444432 225788899965431 3444555444 456666555
Q ss_pred CCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCc--EE--EcCCCCchhhhhcCCceEEeCC---CCHHHHHH
Q 001541 553 KQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLP--IV--ATKNGGPVDIHRVLDNGLLVDP---HDQQSVAD 625 (1057)
Q Consensus 553 ~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~P--VV--at~~Gg~~eiv~~~~~Gllv~p---~d~~~la~ 625 (1057)
.+++++++..| |.+|..+ |.++.||+..|+| +| +.+--......+. -|+..+- ........
T Consensus 218 -~~dma~LMke~----d~aI~Aa-----GstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~--lg~~~~l~~~l~~~~~~~ 285 (318)
T COG3980 218 -TNDMAELMKEA----DLAISAA-----GSTLYEALLLGVPSLVLPLAENQIATAKEFEA--LGIIKQLGYHLKDLAKDY 285 (318)
T ss_pred -chhHHHHHHhc----chheecc-----chHHHHHHHhcCCceEEeeeccHHHHHHHHHh--cCchhhccCCCchHHHHH
Confidence 57899999999 8988664 8999999999999 33 2332221222211 1222221 24566677
Q ss_pred HHHHHHhCHHHHHHHHH
Q 001541 626 ALLKLVADKQLWARCRQ 642 (1057)
Q Consensus 626 aI~~ll~d~~~~~~~~~ 642 (1057)
-+.++.+|+..+..+..
T Consensus 286 ~~~~i~~d~~~rk~l~~ 302 (318)
T COG3980 286 EILQIQKDYARRKNLSF 302 (318)
T ss_pred HHHHhhhCHHHhhhhhh
Confidence 77778888876655444
No 190
>PLN00164 glucosyltransferase; Provisional
Probab=97.35 E-value=0.6 Score=56.39 Aligned_cols=93 Identities=15% Similarity=0.175 Sum_probs=58.4
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chh-hhhcCCceEEeCC---
Q 001541 546 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVD-IHRVLDNGLLVDP--- 617 (1057)
Q Consensus 546 V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~e-iv~~~~~Gllv~p--- 617 (1057)
+...+++|+.+ ++...+ .+.||. +-| -.+++||+++|+|+|+-..-+ ... +++..+.|+.++.
T Consensus 341 ~~v~~w~PQ~~---iL~h~~--vg~fvt---H~G-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~ 411 (480)
T PLN00164 341 LVWPTWAPQKE---ILAHAA--VGGFVT---HCG-WNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRK 411 (480)
T ss_pred eEEeecCCHHH---HhcCcc--cCeEEe---ecc-cchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccc
Confidence 55668887774 555551 024442 123 357899999999999976433 222 2344467777642
Q ss_pred ----CCHHHHHHHHHHHHhCHH-HHHHHHHHHHHH
Q 001541 618 ----HDQQSVADALLKLVADKQ-LWARCRQNGLKN 647 (1057)
Q Consensus 618 ----~d~~~la~aI~~ll~d~~-~~~~~~~~~~~~ 647 (1057)
-+.++++++|.+++.+++ +.+++++++.+.
T Consensus 412 ~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~ 446 (480)
T PLN00164 412 RDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEM 446 (480)
T ss_pred cCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 257999999999998653 345555555443
No 191
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=97.33 E-value=0.00045 Score=72.46 Aligned_cols=181 Identities=15% Similarity=0.163 Sum_probs=93.3
Q ss_pred HHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHH-hCCCCCCCCCeEEeCCCcEEEeccCCCCCCCccccccchhhcccc
Q 001541 794 KKICEAVEKERTEGSIGFILSTSMTISEIHSFLV-SGHLSPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYR 872 (1057)
Q Consensus 794 ~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~-~lgl~~~~~D~lI~~nGa~I~~~~~~~~~~~~~~d~~~~~~i~~~ 872 (1057)
++.|++|++ .+.|+++||-.+.-+.+-+. ..-+ ..+|++-+.||...|..+ .. .|...+...
T Consensus 2 ~~~L~~L~~-----~~~vgvVgGsd~~k~~eQl~~~~~~--~~fdy~f~enG~~~y~~~------~~----~~~~~~~~~ 64 (220)
T PF03332_consen 2 AELLQKLRK-----KVPVGVVGGSDLPKIQEQLGGDDVL--DNFDYVFPENGLVAYKNG------EL----IWSQSIAEF 64 (220)
T ss_dssp HHHHHHHHT-----TSEEEEEESS-HHHHHHHHSTTTHH--HH-SEEEEGGGTEEEETT------EE----EEE--HHHH
T ss_pred HHHHHHHHh-----cCeEEEEcchhHHHHHHHHcccchH--hhCCeeecCCCCeEEECC------Cc----hhhHhHHHH
Confidence 467888886 58999999999988777663 2112 347899999999999764 11 222222222
Q ss_pred cchhhHHHHHH----HhhhcccccccccccccccccccccCcceEEEEe--cCCCCC--------cc----HHHHHHHHH
Q 001541 873 WGGEGLRKTLV----RWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSV--QKPGMT--------PP----VKELRKVLR 934 (1057)
Q Consensus 873 w~~e~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~--------~~----~~el~~~l~ 934 (1057)
...+.+.+++. .........+. ..++|....+ +.+.- ++.... .+ -+.+.+.|+
T Consensus 65 lgee~~~~~in~~l~~~~~l~lp~kr----GtfIE~R~gm----In~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~ 136 (220)
T PF03332_consen 65 LGEEKLQKLINFCLRYISDLDLPVKR----GTFIEFRGGM----INFSPIGRNASQEERDEFDEYDKKHKIREKLVEALK 136 (220)
T ss_dssp HHHHHHHHHHHHHHHHHHT---S-------S-SEEEESSE----EEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHhCCCCccC----CCceeecCCc----EEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHH
Confidence 22233333332 11111111110 1122222111 22211 111100 00 123444555
Q ss_pred HhcCcEEEEEe-eCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecC----CCCCCccccccCcc-eEEEeCC
Q 001541 935 IQALRCHVIYC-QNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGE----SGDTDYEGLLGGVH-KTVILKG 1005 (1057)
Q Consensus 935 ~~~~~~~v~~s-~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD----~~n~D~~eML~~ag-~gVAMgN 1005 (1057)
.....+.+.++ .+.+.+||.|+|.+|..+|++|.+.. .+ -|.|||| ++| | .+.+...+ .|+.+.|
T Consensus 137 ~~f~d~~L~~siGGqiSiDvfp~GwDKty~Lr~l~~~~---~~-~I~FfGDkt~pGGN-D-yei~~~~rt~g~~V~~ 207 (220)
T PF03332_consen 137 KEFPDFGLTFSIGGQISIDVFPKGWDKTYCLRHLEDEG---FD-EIHFFGDKTFPGGN-D-YEIFEDPRTIGHTVTS 207 (220)
T ss_dssp HHTCCCSEEEEEETTTEEEEEETT-SGGGGGGGTTTTT----S-EEEEEESS-STTST-T-HHHHHSTTSEEEE-SS
T ss_pred HHCCCCceEEecCCceEEccccCCccHHHHHHHHHhcc---cc-eEEEEehhccCCCC-C-ceeeecCCccEEEeCC
Confidence 55555444333 44458999999999999999997743 33 5566887 478 8 77776543 4666653
No 192
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.30 E-value=0.00083 Score=69.31 Aligned_cols=42 Identities=26% Similarity=0.314 Sum_probs=36.9
Q ss_pred EecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCc
Q 001541 953 VIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGV 997 (1057)
Q Consensus 953 I~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~a 997 (1057)
..+.+.+|+.+++.+++.+|++.+++++ +||+.+ | ++|++.|
T Consensus 136 ~~~~~~~K~~~l~~~~~~~~~~~~~~~~-iGDs~~-D-~~~~~~a 177 (177)
T TIGR01488 136 VNPEGECKGKVLKELLEESKITLKKIIA-VGDSVN-D-LPMLKLA 177 (177)
T ss_pred ccCCcchHHHHHHHHHHHhCCCHHHEEE-EeCCHH-H-HHHHhcC
Confidence 3467889999999999999999999988 888888 8 9998764
No 193
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.29 E-value=0.038 Score=63.97 Aligned_cols=145 Identities=17% Similarity=0.228 Sum_probs=89.5
Q ss_pred CCCCCcEEE-EEe-CCCC-CCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEE
Q 001541 471 TNPRKPVIL-ALA-RPDP-KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVA 547 (1057)
Q Consensus 471 ~~~~~~~Il-~vG-Rl~~-~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~ 547 (1057)
.++++++|. ..| |-.. ++.++.++++++++.+ ..+++.+++...+. .....+.......+..-.+.
T Consensus 180 l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~--~~p~l~fvvp~a~~---------~~~~~i~~~~~~~~~~~~~~ 248 (373)
T PF02684_consen 180 LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKK--QRPDLQFVVPVAPE---------VHEELIEEILAEYPPDVSIV 248 (373)
T ss_pred CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHH--hCCCeEEEEecCCH---------HHHHHHHHHHHhhCCCCeEE
Confidence 566777654 444 4433 4567899999999975 44667766654432 11222444444444322333
Q ss_pred eCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEc-CCCCchh----------------hhhcCC
Q 001541 548 YPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT-KNGGPVD----------------IHRVLD 610 (1057)
Q Consensus 548 f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat-~~Gg~~e----------------iv~~~~ 610 (1057)
.. ..+-.+.++.| |+.+..| |.+.+|++.+|+|+|.. +.+.+.- ++.+..
T Consensus 249 ~~----~~~~~~~m~~a----d~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~ 315 (373)
T PF02684_consen 249 II----EGESYDAMAAA----DAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGRE 315 (373)
T ss_pred Ec----CCchHHHHHhC----cchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCC
Confidence 22 34778899999 9999887 99999999999998774 3332222 111100
Q ss_pred --ceEEeCCCCHHHHHHHHHHHHhCHHHHHH
Q 001541 611 --NGLLVDPHDQQSVADALLKLVADKQLWAR 639 (1057)
Q Consensus 611 --~Gllv~p~d~~~la~aI~~ll~d~~~~~~ 639 (1057)
.-++=+.-+++.+++++..++.|++.++.
T Consensus 316 v~PEliQ~~~~~~~i~~~~~~ll~~~~~~~~ 346 (373)
T PF02684_consen 316 VVPELIQEDATPENIAAELLELLENPEKRKK 346 (373)
T ss_pred cchhhhcccCCHHHHHHHHHHHhcCHHHHHH
Confidence 00122344789999999999999876443
No 194
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=97.28 E-value=0.15 Score=57.21 Aligned_cols=336 Identities=17% Similarity=0.172 Sum_probs=166.6
Q ss_pred cceEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcC--CCeeeEEEEecCCCCCCCCCccCCcccccCCCCC
Q 001541 164 KKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSM--PGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNS 241 (1057)
Q Consensus 164 ~~m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~--Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~ 241 (1057)
+.+||+|-|.|-+ | =|.-+....+|++|.+. | .+|.++|....-+..+
T Consensus 8 ~~~Ri~~Yshd~~--------G-----lGHlrR~~~Ia~aLv~d~~~--~~Il~IsG~~~~~~F~--------------- 57 (400)
T COG4671 8 KRPRILFYSHDLL--------G-----LGHLRRALRIAHALVEDYLG--FDILIISGGPPAGGFP--------------- 57 (400)
T ss_pred ccceEEEEehhhc--------c-----chHHHHHHHHHHHHhhcccC--ceEEEEeCCCccCCCC---------------
Confidence 3569999996554 2 27888899999999998 8 9999998865222221
Q ss_pred CccccccCCCCCeEEEEccCCCcc---cccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCch
Q 001541 242 DDFMDDMGESSGAYIIRIPFGPKD---KYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAG 318 (1057)
Q Consensus 242 ~~~~~~~~~~~gv~i~rip~~p~~---~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~ 318 (1057)
...|+..+.+|+-... .|-..+. ---+.++. ++-.++ |... .+..+|||+.......|
T Consensus 58 --------~~~gVd~V~LPsl~k~~~G~~~~~d~-~~~l~e~~----~~Rs~l---il~t---~~~fkPDi~IVd~~P~G 118 (400)
T COG4671 58 --------GPAGVDFVKLPSLIKGDNGEYGLVDL-DGDLEETK----KLRSQL---ILST---AETFKPDIFIVDKFPFG 118 (400)
T ss_pred --------CcccCceEecCceEecCCCceeeeec-CCCHHHHH----HHHHHH---HHHH---HHhcCCCEEEEeccccc
Confidence 1248888999872210 1111111 11122222 111111 1111 12378999999765444
Q ss_pred HHH------HHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHH
Q 001541 319 DSA------ALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQ 392 (1057)
Q Consensus 319 ~~a------~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~ 392 (1057)
... ..+. ..+.+.|.-..++-... .. .-+-.++-..++.+-+.-|.|.+...-.....
T Consensus 119 lr~EL~ptL~yl~-~~~t~~vL~lr~i~D~p-~~--------------~~~~w~~~~~~~~I~r~yD~V~v~GdP~f~d~ 182 (400)
T COG4671 119 LRFELLPTLEYLK-TTGTRLVLGLRSIRDIP-QE--------------LEADWRRAETVRLINRFYDLVLVYGDPDFYDP 182 (400)
T ss_pred hhhhhhHHHHHHh-hcCCcceeehHhhhhch-hh--------------hccchhhhHHHHHHHHhheEEEEecCccccCh
Confidence 221 1222 23445555555542211 00 00111222334556677899988755433333
Q ss_pred HhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCC
Q 001541 393 WRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTN 472 (1057)
Q Consensus 393 ~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (1057)
...|+- .+. + +-.+.+.|.= ..-.+..+. |.-+ .+
T Consensus 183 ~~~~~~-~~~----i----------------~~k~~ytG~v-q~~~~~~~~----------------p~~~-------~p 217 (400)
T COG4671 183 LTEFPF-APA----I----------------RAKMRYTGFV-QRSLPHLPL----------------PPHE-------AP 217 (400)
T ss_pred hhcCCc-cHh----h----------------hhheeEeEEe-eccCcCCCC----------------CCcC-------CC
Confidence 222321 221 1 2223333332 100111100 0000 02
Q ss_pred CCCcEEEEEeCCC-CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001541 473 PRKPVILALARPD-PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 551 (1057)
Q Consensus 473 ~~~~~Il~vGRl~-~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~ 551 (1057)
....+++++|.-. -..=+...+.|...+.+... +..+|.|.- |.. ...+++.....-.++|....+
T Consensus 218 E~~~Ilvs~GGG~dG~eLi~~~l~A~~~l~~l~~--~~~ivtGP~-----MP~------~~r~~l~~~A~~~p~i~I~~f 284 (400)
T COG4671 218 EGFDILVSVGGGADGAELIETALAAAQLLAGLNH--KWLIVTGPF-----MPE------AQRQKLLASAPKRPHISIFEF 284 (400)
T ss_pred ccceEEEecCCChhhHHHHHHHHHHhhhCCCCCc--ceEEEeCCC-----CCH------HHHHHHHHhcccCCCeEEEEh
Confidence 3356677777532 22234444455544433221 244555542 221 223344444444467877777
Q ss_pred CCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchh--hhhc---CCceE--EeCCC--CHHH
Q 001541 552 HKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVD--IHRV---LDNGL--LVDPH--DQQS 622 (1057)
Q Consensus 552 v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~e--iv~~---~~~Gl--lv~p~--d~~~ 622 (1057)
..++..++..| +..|.- -|+ +|..|-+.+|+|-+.-..+.+.+ +++. ..-|+ +..|. .++.
T Consensus 285 --~~~~~~ll~gA----~~vVSm---~GY-NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~ 354 (400)
T COG4671 285 --RNDFESLLAGA----RLVVSM---GGY-NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQN 354 (400)
T ss_pred --hhhHHHHHHhh----heeeec---ccc-hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHH
Confidence 68999999999 777633 244 46679999999988766554433 2211 01122 22233 3566
Q ss_pred HHHHHHHHHh
Q 001541 623 VADALLKLVA 632 (1057)
Q Consensus 623 la~aI~~ll~ 632 (1057)
++++|..+++
T Consensus 355 La~al~~~l~ 364 (400)
T COG4671 355 LADALKAALA 364 (400)
T ss_pred HHHHHHhccc
Confidence 7777766665
No 195
>PLN02173 UDP-glucosyl transferase family protein
Probab=97.26 E-value=0.76 Score=54.89 Aligned_cols=94 Identities=15% Similarity=0.137 Sum_probs=59.7
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhhhc-CCceEEeCCC
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRV-LDNGLLVDPH 618 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv~~-~~~Gllv~p~ 618 (1057)
.++.+.+++||.+ +++..+ -++|| .-+-.++++||+++|+|+|+-..-+ ....+.+ -+.|+-+...
T Consensus 317 ~~~~i~~W~PQ~~---iL~H~~--v~~Fv----tHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~ 387 (449)
T PLN02173 317 DKSLVLKWSPQLQ---VLSNKA--IGCFM----THCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAE 387 (449)
T ss_pred CceEEeCCCCHHH---HhCCCc--cceEE----ecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeec
Confidence 4577779998774 555541 02444 2244578999999999999977543 2223332 2567666421
Q ss_pred ------CHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 001541 619 ------DQQSVADALLKLVADKQLWARCRQNGLKN 647 (1057)
Q Consensus 619 ------d~~~la~aI~~ll~d~~~~~~~~~~~~~~ 647 (1057)
+.+++++++++++.+++ .+++++++.+.
T Consensus 388 ~~~~~~~~e~v~~av~~vm~~~~-~~~~r~~a~~~ 421 (449)
T PLN02173 388 KESGIAKREEIEFSIKEVMEGEK-SKEMKENAGKW 421 (449)
T ss_pred ccCCcccHHHHHHHHHHHhcCCh-HHHHHHHHHHH
Confidence 67999999999997643 34444444433
No 196
>PLN00414 glycosyltransferase family protein
Probab=97.25 E-value=0.73 Score=55.08 Aligned_cols=93 Identities=15% Similarity=0.132 Sum_probs=61.5
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhh-hcCCceEEeCC---
Q 001541 546 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIH-RVLDNGLLVDP--- 617 (1057)
Q Consensus 546 V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv-~~~~~Gllv~p--- 617 (1057)
..+.+++||.+ +++.++ .+.||. -+--++++||+++|+|+|+....+ ....+ +..+.|+.+..
T Consensus 314 ~vv~~w~PQ~~---vL~h~~--v~~fvt----H~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~ 384 (446)
T PLN00414 314 IVWEGWVEQPL---ILSHPS--VGCFVN----HCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDS 384 (446)
T ss_pred eEEeccCCHHH---HhcCCc--cceEEe----cCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccC
Confidence 44568888875 454441 134552 233478999999999999977543 22333 34567777742
Q ss_pred --CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHH
Q 001541 618 --HDQQSVADALLKLVADK-QLWARCRQNGLKN 647 (1057)
Q Consensus 618 --~d~~~la~aI~~ll~d~-~~~~~~~~~~~~~ 647 (1057)
-+.+++++++++++.++ +..+++++++++.
T Consensus 385 ~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~ 417 (446)
T PLN00414 385 GWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKL 417 (446)
T ss_pred CccCHHHHHHHHHHHhcCChhhHHHHHHHHHHH
Confidence 37899999999999864 4556666666654
No 197
>PLN02554 UDP-glycosyltransferase family protein
Probab=97.21 E-value=0.92 Score=54.86 Aligned_cols=151 Identities=13% Similarity=0.135 Sum_probs=81.5
Q ss_pred HHHhhhCCC--CCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccch------hhHHH-HHHH
Q 001541 465 EIMRFFTNP--RKPVILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSS------TSASV-LLSV 533 (1057)
Q Consensus 465 ~~~~~~~~~--~~~~Il~vGRl~~--~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~------~~~~~-~~~l 533 (1057)
+..+++... +..++++.|.+.. .+-+..++.+++.+. ..+.+++..... ..... ...+. -..+
T Consensus 263 ~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~-----~~flW~~~~~~~-~~~~~~~~~~~~~~~~lp~~~ 336 (481)
T PLN02554 263 EILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSG-----HRFLWSLRRASP-NIMKEPPGEFTNLEEILPEGF 336 (481)
T ss_pred HHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcC-----CCeEEEEcCCcc-cccccccccccchhhhCChHH
Confidence 344555332 2356788888642 446777777777663 244345543110 00000 00000 0111
Q ss_pred HHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----ch-hhhhc
Q 001541 534 LKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PV-DIHRV 608 (1057)
Q Consensus 534 ~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~-eiv~~ 608 (1057)
.. +. .+++.+.+++|+.+ +++..+ .++||. -+--.+++||+.+|+|+|+....+ .. .+++.
T Consensus 337 ~~---r~--~~~g~v~~W~PQ~~---iL~H~~--v~~Fvt----H~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~ 402 (481)
T PLN02554 337 LD---RT--KDIGKVIGWAPQVA---VLAKPA--IGGFVT----HCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEE 402 (481)
T ss_pred HH---Hh--ccCceEEeeCCHHH---HhCCcc--cCcccc----cCccchHHHHHHcCCCEEecCccccchhhHHHHHHH
Confidence 11 11 24556668888774 443320 044551 223458899999999999976543 22 33445
Q ss_pred CCceEEeCC-------------CCHHHHHHHHHHHHh-CHH
Q 001541 609 LDNGLLVDP-------------HDQQSVADALLKLVA-DKQ 635 (1057)
Q Consensus 609 ~~~Gllv~p-------------~d~~~la~aI~~ll~-d~~ 635 (1057)
.+.|+.++. -+.++++++|.+++. +++
T Consensus 403 ~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~ 443 (481)
T PLN02554 403 LGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQDSD 443 (481)
T ss_pred hCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCCHH
Confidence 566776641 268899999999996 543
No 198
>PLN02764 glycosyltransferase family protein
Probab=97.21 E-value=0.86 Score=54.40 Aligned_cols=114 Identities=14% Similarity=0.092 Sum_probs=70.0
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhh-hcCCceEEeCC---
Q 001541 546 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIH-RVLDNGLLVDP--- 617 (1057)
Q Consensus 546 V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv-~~~~~Gllv~p--- 617 (1057)
+...+++|+.+ +++..+ .++||. -+--++++||+++|+|+|+-...+ ....+ +..+.|+.+.+
T Consensus 319 ~v~~~W~PQ~~---vL~h~~--v~~Fvt----H~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~ 389 (453)
T PLN02764 319 VVWGGWVQQPL---ILSHPS--VGCFVS----HCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREET 389 (453)
T ss_pred cEEeCCCCHHH---HhcCcc--cCeEEe----cCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccC
Confidence 56678988885 444430 044662 244578999999999999987654 22233 33355666532
Q ss_pred --CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHhh----cCCHHHHHHHHHHHHHccc
Q 001541 618 --HDQQSVADALLKLVADK-QLWARCRQNGLKNIH----LFSWPEHCKTYLSRIAGCK 668 (1057)
Q Consensus 618 --~d~~~la~aI~~ll~d~-~~~~~~~~~~~~~v~----~fsw~~~a~~~l~~~~~~~ 668 (1057)
-+.+++.+++.+++.++ ++.+++++++++.-+ .=|-....+++++.+.+..
T Consensus 390 ~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~~~GSS~~~l~~lv~~~~~~~ 447 (453)
T PLN02764 390 GWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLASPGLLTGYVDNFIESLQDLV 447 (453)
T ss_pred CccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhc
Confidence 27899999999999865 445666666655432 2233334455555554443
No 199
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=97.20 E-value=0.0032 Score=66.85 Aligned_cols=41 Identities=15% Similarity=0.292 Sum_probs=34.6
Q ss_pred CCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeC
Q 001541 957 LASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 1004 (1057)
Q Consensus 957 gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMg 1004 (1057)
.-.|...++.+. ..|. ++++ +||+.| | ++|++.+|.+|||.
T Consensus 130 ~~~K~~~l~~l~-~~~~---~~v~-vGDs~n-D-l~ml~~Ag~~ia~~ 170 (203)
T TIGR02137 130 KDPKRQSVIAFK-SLYY---RVIA-AGDSYN-D-TTMLSEAHAGILFH 170 (203)
T ss_pred cchHHHHHHHHH-hhCC---CEEE-EeCCHH-H-HHHHHhCCCCEEec
Confidence 347999999984 5664 5777 899999 9 99999999999997
No 200
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.14 E-value=0.047 Score=62.11 Aligned_cols=241 Identities=12% Similarity=0.049 Sum_probs=133.9
Q ss_pred CcceEEEEcC-CC-chHHHHHHHhcC-CCCEEEEecCC-chhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCE
Q 001541 305 VWPVAIHGHY-AD-AGDSAALLSGAL-NVPMLFTGHSL-GRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEI 380 (1057)
Q Consensus 305 ~~pDvIh~h~-~~-~~~~a~~l~~~~-~iP~V~t~H~l-~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~ 380 (1057)
.+||++.+-. ++ .-.++..+.+.. ++|+|+.+--. |.++- .| . ....+.+|+
T Consensus 84 ~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~PsVWAWr~--------------------~R-a---~~i~~~~D~ 139 (381)
T COG0763 84 NKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVSPSVWAWRP--------------------KR-A---VKIAKYVDH 139 (381)
T ss_pred cCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEECcceeeech--------------------hh-H---HHHHHHhhH
Confidence 6799999865 44 344455554432 48988776543 22210 01 0 124678899
Q ss_pred EEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCC-CCCCcCCCCCCCCCCCCCCCCCCCCCC
Q 001541 381 VITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGM-EFHHIVPQDGDMDGETEGNEDNPASPD 459 (1057)
Q Consensus 381 Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGi-D~~~f~p~~~~~~~~~~~~~~~~~~~~ 459 (1057)
|++.-+.|.+.+.+ .|+ .++.|-+.+ |.-.+.+.
T Consensus 140 lLailPFE~~~y~k------------------~g~--------~~~yVGHpl~d~i~~~~~------------------- 174 (381)
T COG0763 140 LLAILPFEPAFYDK------------------FGL--------PCTYVGHPLADEIPLLPD------------------- 174 (381)
T ss_pred eeeecCCCHHHHHh------------------cCC--------CeEEeCChhhhhcccccc-------------------
Confidence 99988877665322 122 234554443 22212211
Q ss_pred CchHHHHHhhhCCCCCcEE-EEEe-CCCC-CCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHH
Q 001541 460 PPIWSEIMRFFTNPRKPVI-LALA-RPDP-KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKL 536 (1057)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~I-l~vG-Rl~~-~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l 536 (1057)
.-..+.++..+.+++++ +..| |-.. .+.++.+++|++++.+. .+++.+++--... .+...+...
T Consensus 175 --r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~--~~~~~~vlp~~~~---------~~~~~~~~~ 241 (381)
T COG0763 175 --REAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKAR--YPDLKFVLPLVNA---------KYRRIIEEA 241 (381)
T ss_pred --HHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhh--CCCceEEEecCcH---------HHHHHHHHH
Confidence 11234445555665554 4444 3222 46788889999999753 4566666654432 111222222
Q ss_pred HHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEc-CCC---------------
Q 001541 537 IDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT-KNG--------------- 600 (1057)
Q Consensus 537 ~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat-~~G--------------- 600 (1057)
.........+.+. ..+-...+..| |+.+..| |.+.+|++.+|+|+|.+ +..
T Consensus 242 ~~~~~~~~~~~~~----~~~~~~a~~~a----D~al~aS-----GT~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~y 308 (381)
T COG0763 242 LKWEVAGLSLILI----DGEKRKAFAAA----DAALAAS-----GTATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPY 308 (381)
T ss_pred hhccccCceEEec----CchHHHHHHHh----hHHHHhc-----cHHHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCc
Confidence 2222221222222 34777899999 9988876 99999999999999875 222
Q ss_pred -CchhhhhcCCceEEe-----CCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 001541 601 -GPVDIHRVLDNGLLV-----DPHDQQSVADALLKLVADKQLWARCRQN 643 (1057)
Q Consensus 601 -g~~eiv~~~~~Gllv-----~p~d~~~la~aI~~ll~d~~~~~~~~~~ 643 (1057)
+++.|+.+ -.+| ..-.++.|++++..++.+...++++.+.
T Consensus 309 isLpNIi~~---~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~ 354 (381)
T COG0763 309 VSLPNILAG---REIVPELIQEDCTPENLARALEELLLNGDRREALKEK 354 (381)
T ss_pred ccchHHhcC---CccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHH
Confidence 22223211 0111 1124899999999999998554444433
No 201
>PLN02210 UDP-glucosyl transferase
Probab=97.11 E-value=0.67 Score=55.58 Aligned_cols=136 Identities=13% Similarity=0.179 Sum_probs=76.6
Q ss_pred CCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001541 474 RKPVILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 551 (1057)
Q Consensus 474 ~~~~Il~vGRl~~--~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~ 551 (1057)
...+++++|.... .+-+..+..+++.. . ..+.++++.....+. ...+.+... .++....++
T Consensus 269 ~svvyvsfGS~~~~~~~~~~e~a~~l~~~----~-~~flw~~~~~~~~~~--------~~~~~~~~~----~~~g~v~~w 331 (456)
T PLN02210 269 SSVVYISFGSMLESLENQVETIAKALKNR----G-VPFLWVIRPKEKAQN--------VQVLQEMVK----EGQGVVLEW 331 (456)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHhC----C-CCEEEEEeCCccccc--------hhhHHhhcc----CCCeEEEec
Confidence 3467788887643 23355555555544 2 244455553211000 111111111 133345688
Q ss_pred CCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhhhc-CCceEEeCC------CCH
Q 001541 552 HKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRV-LDNGLLVDP------HDQ 620 (1057)
Q Consensus 552 v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv~~-~~~Gllv~p------~d~ 620 (1057)
+|+. ++++.++ .++||.- -|+ ++++||+++|+|+|+-...+ ....+.+ .+.|+.++. -+.
T Consensus 332 ~PQ~---~iL~h~~--vg~FitH---~G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~ 402 (456)
T PLN02210 332 SPQE---KILSHMA--ISCFVTH---CGW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKV 402 (456)
T ss_pred CCHH---HHhcCcC--cCeEEee---CCc-ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCH
Confidence 8876 4666661 1255521 233 47899999999999977544 2223333 567877742 377
Q ss_pred HHHHHHHHHHHhCHH
Q 001541 621 QSVADALLKLVADKQ 635 (1057)
Q Consensus 621 ~~la~aI~~ll~d~~ 635 (1057)
+++++++++++.+++
T Consensus 403 ~~l~~av~~~m~~~~ 417 (456)
T PLN02210 403 EEVERCIEAVTEGPA 417 (456)
T ss_pred HHHHHHHHHHhcCch
Confidence 999999999997643
No 202
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=96.95 E-value=0.41 Score=53.26 Aligned_cols=169 Identities=12% Similarity=0.025 Sum_probs=111.0
Q ss_pred CcEEEEEeC-CCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCE-EeCCCC
Q 001541 475 KPVILALAR-PDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQV-AYPKHH 552 (1057)
Q Consensus 475 ~~~Il~vGR-l~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V-~f~g~v 552 (1057)
.++.+-+|. -|+.-+....++++.+.. ..++.+++-=+ +..+++.|..++.+...++--.+++ .+...+
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L~~l~~~~----~~~v~ii~Pls-----Yp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l 215 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEALRALHQQF----GDNVKIIVPMG-----YPANNQAYIEEVRQAGLALFGAENFQILTEKL 215 (322)
T ss_pred CceEEEEeCCCCCcccHHHHHHHHHHHh----CCCeEEEEECC-----cCCCCHHHHHHHHHHHHHhcCcccEEehhhhC
Confidence 455555664 678888888888887764 34566555322 1123467899999998888653454 557789
Q ss_pred CCCcHHHHHHHhhcCCcEEEEcC-CCCCCCHHHHHHHHcCCcEEEcC-CCCchhhhhcCCceEEeCCC--CHHHHHHHHH
Q 001541 553 KQSDVPEIYRLAAKTKGVFINPA-FIEPFGLTLIEAAAHGLPIVATK-NGGPVDIHRVLDNGLLVDPH--DQQSVADALL 628 (1057)
Q Consensus 553 ~~~dl~~ly~~Aa~~~dv~v~ps-~~Egfgl~~lEAmA~G~PVVat~-~Gg~~eiv~~~~~Gllv~p~--d~~~la~aI~ 628 (1057)
+.+|..++++.| |+.++-- ...++|..++ .+..|+||+.+. +.-..++.+.+- -++++.. |...+.++
T Consensus 216 ~f~eYl~lL~~~----Dl~~f~~~RQQgiGnl~l-Li~~G~~v~l~r~n~fwqdl~e~gv-~Vlf~~d~L~~~~v~e~-- 287 (322)
T PRK02797 216 PFDDYLALLRQC----DLGYFIFARQQGIGTLCL-LIQLGKPVVLSRDNPFWQDLTEQGL-PVLFTGDDLDEDIVREA-- 287 (322)
T ss_pred CHHHHHHHHHhC----CEEEEeechhhHHhHHHH-HHHCCCcEEEecCCchHHHHHhCCC-eEEecCCcccHHHHHHH--
Confidence 999999999999 9998875 5678887654 678899998875 666777765432 2334322 22222221
Q ss_pred HHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccC
Q 001541 629 KLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKP 669 (1057)
Q Consensus 629 ~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~~ 669 (1057)
.+++...-++.+. |+-+...+.|.++++...+
T Consensus 288 --------~rql~~~dk~~I~-Ff~pn~~~~W~~~l~~~~g 319 (322)
T PRK02797 288 --------QRQLASVDKNIIA-FFSPNYLQGWRNALAIAAG 319 (322)
T ss_pred --------HHHHHhhCcceee-ecCHhHHHHHHHHHHHhhC
Confidence 1222222223333 9999999999999986554
No 203
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=96.94 E-value=0.00065 Score=75.01 Aligned_cols=63 Identities=8% Similarity=0.036 Sum_probs=50.6
Q ss_pred eEEEEEecCCCC--Cc----chHHHHHHHHHHHhhhcCCCeEEEEECCCCHH---HHHHHHHhCCCCCCCCCeEEeC
Q 001541 775 HIFVISVDCDST--TG----LLDATKKICEAVEKERTEGSIGFILSTSMTIS---EIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 775 kLi~~DiDGTL~--~~----i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~---~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
|+|+||+||||. .. +.+.+.++|++++++ |+.|+++|||+.. .+...++.+|++. .++-++++
T Consensus 2 k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~----G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~-~~~~i~ts 73 (257)
T TIGR01458 2 KGVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGA----SVKVRFVTNTTKESKQDLLERLQRLGFDI-SEDEVFTP 73 (257)
T ss_pred CEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHC----CCeEEEEECCCCCCHHHHHHHHHHcCCCC-CHHHeEcH
Confidence 689999999992 23 777999999999987 9999999987655 5778889999863 34556664
No 204
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=96.92 E-value=0.0087 Score=78.42 Aligned_cols=41 Identities=10% Similarity=-0.028 Sum_probs=38.6
Q ss_pred CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 787 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 787 ~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
..+.+.++++|++++++ |+.++++|||++..+..+.+++|+
T Consensus 567 Dplr~~v~~aI~~l~~~----Gi~v~~~TGd~~~ta~~ia~~~gi 607 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRSA----GIKVIMVTGDHPITAKAIAKGVGI 607 (997)
T ss_pred CCChHHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 56788999999999997 999999999999999999999998
No 205
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=96.91 E-value=0.0087 Score=61.32 Aligned_cols=148 Identities=13% Similarity=0.121 Sum_probs=76.0
Q ss_pred CCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcC-CCchHHHHHHHhcC-C
Q 001541 252 SGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHY-ADAGDSAALLSGAL-N 329 (1057)
Q Consensus 252 ~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~-~~~~~~a~~l~~~~-~ 329 (1057)
+||+++++...+ -......+++..+...+++--. ..+++.+.... +..||||.+|. |-.++ .++..+ +
T Consensus 19 ~GV~~~~y~~~~----~~~~~~~~~~~~~e~~~~rg~a-v~~a~~~L~~~--Gf~PDvI~~H~GWGe~L---flkdv~P~ 88 (171)
T PF12000_consen 19 PGVRVVRYRPPR----GPTPGTHPYVRDFEAAVLRGQA-VARAARQLRAQ--GFVPDVIIAHPGWGETL---FLKDVFPD 88 (171)
T ss_pred CCcEEEEeCCCC----CCCCCCCcccccHHHHHHHHHH-HHHHHHHHHHc--CCCCCEEEEcCCcchhh---hHHHhCCC
Confidence 488888876522 2334556777777665543322 22222222222 46799999997 33322 333334 7
Q ss_pred CCEEEEecCCchhhHHHHHHhhhcc--hHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHH
Q 001541 330 VPMLFTGHSLGRDKLEQLLKQARLS--RDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKL 407 (1057)
Q Consensus 330 iP~V~t~H~l~~~~~~~l~~~g~~~--~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l 407 (1057)
+|+|...--.+...-. ..|.-+ ........+...+-..-...+..||..++.|......+ .+.+.
T Consensus 89 a~li~Y~E~~y~~~g~---d~~FDpe~p~~~~~~~~~r~rN~~~l~~l~~~D~~isPT~wQ~~~f-------P~~~r--- 155 (171)
T PF12000_consen 89 APLIGYFEFYYRASGA---DVGFDPEFPPSLDDRARLRMRNAHNLLALEQADAGISPTRWQRSQF-------PAEFR--- 155 (171)
T ss_pred CcEEEEEEEEecCCCC---cCCCCCCCCCCHHHHHHHHHHhHHHHHHHHhCCcCcCCCHHHHHhC-------CHHHH---
Confidence 8876533211100000 000000 00111111111111123457889999999999865542 22211
Q ss_pred HHhHhccccccCCCCCcEEEeCCCCCCCCc
Q 001541 408 RARIKRNVSCYGKFMPRMAIIPPGMEFHHI 437 (1057)
Q Consensus 408 ~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f 437 (1057)
+|+.||+-|||++.+
T Consensus 156 ---------------~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 156 ---------------SKISVIHDGIDTDRF 170 (171)
T ss_pred ---------------cCcEEeecccchhhc
Confidence 289999999999865
No 206
>PF08550 DUF1752: Fungal protein of unknown function (DUF1752); InterPro: IPR013860 This entry represents fungal proteins of unknown function. This short section domain is bounded by two highly conserved tryptophans. The entry contains P34072 from SWISSPROT that is thought to be a negative regulator of RAS-cAMP pathway in S. cerevisiae and the S. pombe member is a GAF1 transcription factor Q10280 from SWISSPROT that is also associated with the zinc finger family GATA PF00320 from PFAM.
Probab=96.90 E-value=0.0004 Score=48.94 Aligned_cols=24 Identities=33% Similarity=0.799 Sum_probs=18.0
Q ss_pred HhccChhhhhhhhhhhhHHHHHhh
Q 001541 63 QATRSPQERNTRLENMCWRIWNLA 86 (1057)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~ 86 (1057)
+.++..-+=..||||++||+|+.+
T Consensus 6 ~~~k~~l~~~~RLeN~sWR~w~~~ 29 (29)
T PF08550_consen 6 TKCKDSLPNGERLENLSWRLWNKN 29 (29)
T ss_pred hhhhhhcCcchhHHHHHHHHHhcC
Confidence 344445555789999999999864
No 207
>PLN02167 UDP-glycosyltransferase family protein
Probab=96.88 E-value=1.7 Score=52.40 Aligned_cols=149 Identities=15% Similarity=0.193 Sum_probs=81.6
Q ss_pred HHHhhhCCC--CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHc
Q 001541 465 EIMRFFTNP--RKPVILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY 540 (1057)
Q Consensus 465 ~~~~~~~~~--~~~~Il~vGRl~--~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~ 540 (1057)
...+++... +..+.+++|.+. ..+-+..++.+++.+. ..+.++++...... ......+-+.+.+ +.
T Consensus 269 ~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~-----~~flw~~~~~~~~~--~~~~~~lp~~~~e---r~ 338 (475)
T PLN02167 269 RIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVG-----CRFLWSIRTNPAEY--ASPYEPLPEGFMD---RV 338 (475)
T ss_pred HHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCC-----CcEEEEEecCcccc--cchhhhCChHHHH---Hh
Confidence 455555432 346677888763 3445777777777662 24444555321100 0000000011111 11
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCc----h-hhhhcCCceEEe
Q 001541 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----V-DIHRVLDNGLLV 615 (1057)
Q Consensus 541 ~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~----~-eiv~~~~~Gllv 615 (1057)
.++..+.+++|+.+ +++..+ .+.||.- -|+ ++++||+++|+|+|+-...+= . -+++..+.|+.+
T Consensus 339 --~~rg~v~~w~PQ~~---iL~h~~--vg~fvtH---~G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~ 407 (475)
T PLN02167 339 --MGRGLVCGWAPQVE---ILAHKA--IGGFVSH---CGW-NSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVEL 407 (475)
T ss_pred --ccCeeeeccCCHHH---HhcCcc--cCeEEee---CCc-ccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEe
Confidence 13445568887774 555531 0455522 233 478999999999999765431 1 224445668776
Q ss_pred CC---------CCHHHHHHHHHHHHhCH
Q 001541 616 DP---------HDQQSVADALLKLVADK 634 (1057)
Q Consensus 616 ~p---------~d~~~la~aI~~ll~d~ 634 (1057)
.. -+.++++++|.+++.++
T Consensus 408 ~~~~~~~~~~~~~~~~l~~av~~~m~~~ 435 (475)
T PLN02167 408 RLDYVSAYGEIVKADEIAGAVRSLMDGE 435 (475)
T ss_pred ecccccccCCcccHHHHHHHHHHHhcCC
Confidence 42 26889999999999753
No 208
>PLN02954 phosphoserine phosphatase
Probab=96.85 E-value=0.0048 Score=66.39 Aligned_cols=43 Identities=14% Similarity=0.235 Sum_probs=34.1
Q ss_pred CCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEe
Q 001541 956 VLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 1003 (1057)
Q Consensus 956 ~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAM 1003 (1057)
.+.+|..+++.+++++|+ +++++ +||+.+ | +.|-+.+|..++.
T Consensus 152 ~~~~K~~~i~~~~~~~~~--~~~i~-iGDs~~-D-i~aa~~~~~~~~~ 194 (224)
T PLN02954 152 RSGGKAEAVQHIKKKHGY--KTMVM-IGDGAT-D-LEARKPGGADLFI 194 (224)
T ss_pred CCccHHHHHHHHHHHcCC--CceEE-EeCCHH-H-HHhhhcCCCCEEE
Confidence 456799999999999986 57877 899999 9 9998775555443
No 209
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.84 E-value=0.0018 Score=63.55 Aligned_cols=54 Identities=11% Similarity=0.078 Sum_probs=47.2
Q ss_pred eEEEEEecCCCC-----------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCC--------HHHHHHHHHhCCCC
Q 001541 775 HIFVISVDCDST-----------TGLLDATKKICEAVEKERTEGSIGFILSTSMT--------ISEIHSFLVSGHLS 832 (1057)
Q Consensus 775 kLi~~DiDGTL~-----------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~--------~~~i~~~l~~lgl~ 832 (1057)
|+++||+||||. ..+.+.+.++|+.|+++ |+.++|+|+++ ...+..+++.+++.
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~----g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~ 73 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEA----GYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP 73 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHC----CCEEEEEECCccccccHHHHHHHHHHHHHCCCC
Confidence 689999999995 35567889999999986 89999999999 78899999999984
No 210
>PLN02555 limonoid glucosyltransferase
Probab=96.81 E-value=1.6 Score=52.60 Aligned_cols=94 Identities=21% Similarity=0.194 Sum_probs=59.6
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhh-hcCCceEEeC--
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIH-RVLDNGLLVD-- 616 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv-~~~~~Gllv~-- 616 (1057)
+++.+.+++|+.++..- .++ ++||. -+--++++||+.+|+|+|+...-+ ....+ +.-+.|+.+.
T Consensus 337 ~~g~v~~W~PQ~~iL~H-~~v----~~Fvt----H~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~ 407 (480)
T PLN02555 337 DKGKIVQWCPQEKVLAH-PSV----ACFVT----HCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRG 407 (480)
T ss_pred CceEEEecCCHHHHhCC-Ccc----CeEEe----cCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCC
Confidence 56677788887653322 233 55662 233468899999999999977543 22222 2336677762
Q ss_pred ---C--CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 001541 617 ---P--HDQQSVADALLKLVADKQLWARCRQNGLKN 647 (1057)
Q Consensus 617 ---p--~d~~~la~aI~~ll~d~~~~~~~~~~~~~~ 647 (1057)
. -+.++++++|.+++.++ +.+++++++++.
T Consensus 408 ~~~~~~v~~~~v~~~v~~vm~~~-~g~~~r~ra~~l 442 (480)
T PLN02555 408 EAENKLITREEVAECLLEATVGE-KAAELKQNALKW 442 (480)
T ss_pred ccccCcCcHHHHHHHHHHHhcCc-hHHHHHHHHHHH
Confidence 1 25789999999999764 345566665544
No 211
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.77 E-value=0.002 Score=63.14 Aligned_cols=52 Identities=13% Similarity=0.125 Sum_probs=43.4
Q ss_pred eEEEEEecCCCCCc---------------chHHHHHHHHHHHhhhcCCCeEEEEECCC-CHHHHHHHHHhCC
Q 001541 775 HIFVISVDCDSTTG---------------LLDATKKICEAVEKERTEGSIGFILSTSM-TISEIHSFLVSGH 830 (1057)
Q Consensus 775 kLi~~DiDGTL~~~---------------i~~~t~~al~~l~~~~~~~gi~~vIaTGR-~~~~i~~~l~~lg 830 (1057)
|+|++|+||||... +-+.+.+.|+.|+++ |+.++|+|++ +...+...++..+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~----g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKN----GFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHC----CeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999311 456899999999986 8999999999 7877778888776
No 212
>PLN02645 phosphoglycolate phosphatase
Probab=96.76 E-value=0.0021 Score=72.99 Aligned_cols=65 Identities=9% Similarity=0.085 Sum_probs=50.0
Q ss_pred cceEEEEEecCCCC--CcchHHHHHHHHHHHhhhcCCCeEEEEECCCC---HHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 773 RKHIFVISVDCDST--TGLLDATKKICEAVEKERTEGSIGFILSTSMT---ISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 773 ~kkLi~~DiDGTL~--~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~---~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
..++|+||+||||. ..+.+...++|+.|+++ |+.|+++|+|+ ...+.+-|+.+|++. .++-++++
T Consensus 27 ~~~~~~~D~DGtl~~~~~~~~ga~e~l~~lr~~----g~~~~~~TN~~~~~~~~~~~~l~~lGi~~-~~~~I~ts 96 (311)
T PLN02645 27 SVETFIFDCDGVIWKGDKLIEGVPETLDMLRSM----GKKLVFVTNNSTKSRAQYGKKFESLGLNV-TEEEIFSS 96 (311)
T ss_pred hCCEEEEeCcCCeEeCCccCcCHHHHHHHHHHC----CCEEEEEeCCCCCCHHHHHHHHHHCCCCC-ChhhEeeh
Confidence 35699999999992 45667889999999997 89999999999 555555567888863 45555554
No 213
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=96.75 E-value=0.17 Score=61.47 Aligned_cols=243 Identities=13% Similarity=0.044 Sum_probs=132.3
Q ss_pred CcceEEEE-cCCCchHHHHHHHhcCCC--CEEEEecCC-chhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCE
Q 001541 305 VWPVAIHG-HYADAGDSAALLSGALNV--PMLFTGHSL-GRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEI 380 (1057)
Q Consensus 305 ~~pDvIh~-h~~~~~~~a~~l~~~~~i--P~V~t~H~l-~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~ 380 (1057)
.+||++.+ .+++...-.+..++..|+ |+|+.+--- |.++ ..|+ +..-+.+|.
T Consensus 309 ~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVsPqVWAWR---------------------~~Ri---kki~k~vD~ 364 (608)
T PRK01021 309 TNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVCPSIWAWR---------------------PKRK---TILEKYLDL 364 (608)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECccceeeC---------------------cchH---HHHHHHhhh
Confidence 67999888 455555544444455675 987765432 1111 0111 124566889
Q ss_pred EEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCC-CCCCcCCCCCCCCCCCCCCCCCCCCCC
Q 001541 381 VITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGM-EFHHIVPQDGDMDGETEGNEDNPASPD 459 (1057)
Q Consensus 381 Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGi-D~~~f~p~~~~~~~~~~~~~~~~~~~~ 459 (1057)
++|.=+.|.+.+.+ +|+ ++..+-++. |.-...+
T Consensus 365 ll~IfPFE~~~y~~------------------~gv--------~v~yVGHPL~d~i~~~~-------------------- 398 (608)
T PRK01021 365 LLLILPFEQNLFKD------------------SPL--------RTVYLGHPLVETISSFS-------------------- 398 (608)
T ss_pred heecCccCHHHHHh------------------cCC--------CeEEECCcHHhhcccCC--------------------
Confidence 99988877664321 222 455565543 3211110
Q ss_pred CchHHHHHhhhCCCCCcEE-EEEe-CCCC-CCCHHHHHHHHH--hcccccCCCcEEEEEecCCCCcccchhhHHHHHHHH
Q 001541 460 PPIWSEIMRFFTNPRKPVI-LALA-RPDP-KKNITTLVKAFG--ECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVL 534 (1057)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~I-l~vG-Rl~~-~Kgi~~Ll~A~~--~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~ 534 (1057)
...+.++++..++++++| +..| |-.+ ++.++.+++|+. .+.+ ++.+++...+.. ..+.+.
T Consensus 399 -~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~-----~l~fvvp~a~~~---------~~~~i~ 463 (608)
T PRK01021 399 -PNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLAS-----THQLLVSSANPK---------YDHLIL 463 (608)
T ss_pred -CHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhcc-----CeEEEEecCchh---------hHHHHH
Confidence 111223444555566654 4444 4333 467888999998 5532 355555433221 123344
Q ss_pred HHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEc-CCCCchh---------
Q 001541 535 KLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT-KNGGPVD--------- 604 (1057)
Q Consensus 535 ~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat-~~Gg~~e--------- 604 (1057)
+..+..+.. .+.+.. ..+-.+++++| |+.+..| |.+.+|++.+|+|+|.. +.+...-
T Consensus 464 ~~~~~~~~~-~~~ii~---~~~~~~~m~aa----D~aLaaS-----GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki 530 (608)
T PRK01021 464 EVLQQEGCL-HSHIVP---SQFRYELMREC----DCALAKC-----GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKI 530 (608)
T ss_pred HHHhhcCCC-CeEEec---CcchHHHHHhc----CeeeecC-----CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhc
Confidence 444433311 122221 11346999999 9999887 99999999999998773 3332211
Q ss_pred ---------hhhcCC-ceEEe---CCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 001541 605 ---------IHRVLD-NGLLV---DPHDQQSVADALLKLVADKQLWARCRQNGLK 646 (1057)
Q Consensus 605 ---------iv~~~~-~Gllv---~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~ 646 (1057)
++.+.. -=-++ +.-+++.+++++ +++.|++.++++.+.-.+
T Consensus 531 ~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~~l~~ 584 (608)
T PRK01021 531 ILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQKDACRD 584 (608)
T ss_pred cCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHHHHHHH
Confidence 111100 00122 234689999996 888888876666554433
No 214
>PLN03004 UDP-glycosyltransferase
Probab=96.75 E-value=2.1 Score=51.29 Aligned_cols=152 Identities=10% Similarity=0.102 Sum_probs=85.1
Q ss_pred HHhhhCC--CCCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHH-HHHHHHHHHHHc
Q 001541 466 IMRFFTN--PRKPVILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSAS-VLLSVLKLIDKY 540 (1057)
Q Consensus 466 ~~~~~~~--~~~~~Il~vGRl~--~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~-~~~~l~~l~~~~ 540 (1057)
..+++.. ++..+++++|... +.+-+..+..+++.+. . .+..++......+.-...... +-.... ++.
T Consensus 260 c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~----~-~FlW~~r~~~~~~~~~~~~~~~lp~gf~---er~ 331 (451)
T PLN03004 260 CLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSG----Q-RFLWVVRNPPELEKTELDLKSLLPEGFL---SRT 331 (451)
T ss_pred HHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCC----C-CEEEEEcCCccccccccchhhhCChHHH---Hhc
Confidence 3444432 3456778888864 3455667777777653 2 343455421110000000000 001111 111
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhh-hcCCceEEe
Q 001541 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIH-RVLDNGLLV 615 (1057)
Q Consensus 541 ~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv-~~~~~Gllv 615 (1057)
. ..++...+++||.+ +++.+ +|..+-+ -+--++++||+++|+|+|+....+ ....+ ...+.|+.+
T Consensus 332 ~-~~g~~v~~W~PQ~~---iL~H~----~v~~FvT--H~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l 401 (451)
T PLN03004 332 E-DKGMVVKSWAPQVP---VLNHK----AVGGFVT--HCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISM 401 (451)
T ss_pred c-CCcEEEEeeCCHHH---HhCCC----ccceEec--cCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEe
Confidence 1 24577788988885 66677 5622222 233468899999999999976433 23333 334678777
Q ss_pred CC-----CCHHHHHHHHHHHHhCHH
Q 001541 616 DP-----HDQQSVADALLKLVADKQ 635 (1057)
Q Consensus 616 ~p-----~d~~~la~aI~~ll~d~~ 635 (1057)
+. -+.++++++|.+++.++.
T Consensus 402 ~~~~~~~~~~e~l~~av~~vm~~~~ 426 (451)
T PLN03004 402 NESETGFVSSTEVEKRVQEIIGECP 426 (451)
T ss_pred cCCcCCccCHHHHHHHHHHHhcCHH
Confidence 53 278999999999998754
No 215
>PRK10671 copA copper exporting ATPase; Provisional
Probab=96.68 E-value=0.0099 Score=76.67 Aligned_cols=54 Identities=9% Similarity=0.122 Sum_probs=46.3
Q ss_pred ceEEEEEecCCC------CCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 774 KHIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 774 kkLi~~DiDGTL------~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
...+++..||++ ...+-+..+++|+.+++. |+.++++||.+...+..+++++|+
T Consensus 630 ~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~~----gi~v~~~Tgd~~~~a~~ia~~lgi 689 (834)
T PRK10671 630 ATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKA----GYRLVMLTGDNPTTANAIAKEAGI 689 (834)
T ss_pred CeEEEEEECCEEEEEEEccCcchhhHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCC
Confidence 456778888886 256677889999999886 899999999999999999999987
No 216
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=96.64 E-value=0.3 Score=52.48 Aligned_cols=198 Identities=14% Similarity=0.086 Sum_probs=112.7
Q ss_pred CcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEec
Q 001541 305 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 384 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~ 384 (1057)
.+||+|++..-.+..++..+.++.+.+.++.+.+.- .-.+.-|.||.+
T Consensus 69 ~~Pdl~I~aGrrta~l~~~lkk~~~~~~vVqI~~Pr--------------------------------lp~~~fDlvivp 116 (329)
T COG3660 69 QRPDLIITAGRRTAPLAFYLKKKFGGIKVVQIQDPR--------------------------------LPYNHFDLVIVP 116 (329)
T ss_pred CCCceEEecccchhHHHHHHHHhcCCceEEEeeCCC--------------------------------CCcccceEEecc
Confidence 579999999888888889999888887666655431 013456889998
Q ss_pred CHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCC-CCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchH
Q 001541 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPP-GMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 463 (1057)
Q Consensus 385 S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpn-GiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1057)
-++.++++... ...++|. |. +..+.+. ......
T Consensus 117 ~HD~~~~~s~~----------------------------~~Nilpi~Gs-~h~Vt~~-----------------~lAa~~ 150 (329)
T COG3660 117 YHDWREELSDQ----------------------------GPNILPINGS-PHNVTSQ-----------------RLAALR 150 (329)
T ss_pred chhhhhhhhcc----------------------------CCceeeccCC-CCcccHH-----------------HhhhhH
Confidence 88766653211 1223442 22 2222211 111222
Q ss_pred HHHHhhhCCCCCcEEEEEeCCCCCCCH-----HHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHH
Q 001541 464 SEIMRFFTNPRKPVILALARPDPKKNI-----TTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLI 537 (1057)
Q Consensus 464 ~~~~~~~~~~~~~~Il~vGRl~~~Kgi-----~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~ 537 (1057)
+..+.++..+...+-+.||.-.+.-.+ ..+..++.+..+ .....+ +--.+... ..+..++
T Consensus 151 e~~~~~~p~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~---~~g~~~lisfSRRTp-----------~~~~s~l 216 (329)
T COG3660 151 EAFKHLLPLPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILE---NQGGSFLISFSRRTP-----------DTVKSIL 216 (329)
T ss_pred HHHHhhCCCCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHH---hCCceEEEEeecCCc-----------HHHHHHH
Confidence 333444445666778899987665544 223333333322 122223 33344332 2333444
Q ss_pred HH-cCCCCCEEeCCCC-CCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC
Q 001541 538 DK-YDLYGQVAYPKHH-KQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG 601 (1057)
Q Consensus 538 ~~-~~l~~~V~f~g~v-~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg 601 (1057)
.. +.-.+.+.+.+.- ...-..+++.+| |.+|.+.-.-.| +-||+++|+||-+-...+
T Consensus 217 ~~~l~s~~~i~w~~~d~g~NPY~~~La~A----dyii~TaDSinM---~sEAasTgkPv~~~~~~~ 275 (329)
T COG3660 217 KNNLNSSPGIVWNNEDTGYNPYIDMLAAA----DYIISTADSINM---CSEAASTGKPVFILEPPN 275 (329)
T ss_pred HhccccCceeEeCCCCCCCCchHHHHhhc----ceEEEecchhhh---hHHHhccCCCeEEEecCC
Confidence 44 4444556665541 234578999999 999998643333 679999999998765443
No 217
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=96.61 E-value=0.0037 Score=64.19 Aligned_cols=65 Identities=12% Similarity=0.190 Sum_probs=47.6
Q ss_pred CcceEEEEEecCCCCCc---------------chHHHHHHHHHHHhhhcCCCeEEEEECCCCH------------HHHHH
Q 001541 772 RRKHIFVISVDCDSTTG---------------LLDATKKICEAVEKERTEGSIGFILSTSMTI------------SEIHS 824 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL~~~---------------i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~------------~~i~~ 824 (1057)
...|+++||+||||... +-+.+.++|+.|+++ |+.++|+|..+. ..+..
T Consensus 11 ~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----G~~l~I~TN~~~~~~~~~~~~~~~~~i~~ 86 (166)
T TIGR01664 11 PQSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDE----GYKIVIFTNQSGIGRGKLSAESFKNKIEA 86 (166)
T ss_pred CcCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHC----CCEEEEEeCCcccccCcccHHHHHHHHHH
Confidence 35689999999999421 125688999999986 899999996443 24678
Q ss_pred HHHhCCCCCCCCCeEEeCC
Q 001541 825 FLVSGHLSPSDFDAFICNS 843 (1057)
Q Consensus 825 ~l~~lgl~~~~~D~lI~~n 843 (1057)
+++.+|+. ++.+|+++
T Consensus 87 ~l~~~gl~---~~~ii~~~ 102 (166)
T TIGR01664 87 FLEKLKVP---IQVLAATH 102 (166)
T ss_pred HHHHcCCC---EEEEEecC
Confidence 89999984 34555544
No 218
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=96.56 E-value=0.034 Score=61.26 Aligned_cols=67 Identities=10% Similarity=0.034 Sum_probs=48.6
Q ss_pred CcceEEEEEecCCC--CCcchHHHHHHHHHHHhhhcCCCeEEEEEC---CCCHHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 772 RRKHIFVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILST---SMTISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL--~~~i~~~t~~al~~l~~~~~~~gi~~vIaT---GR~~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
.+.+.++||+|||+ -...-+...++|+.|+++ |+.+++.| .|+...+...|..++.....+|.++++
T Consensus 6 ~~y~~~l~DlDGvl~~G~~~ipga~e~l~~L~~~----g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS 77 (269)
T COG0647 6 DKYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAA----GKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTS 77 (269)
T ss_pred hhcCEEEEcCcCceEeCCccCchHHHHHHHHHHc----CCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecH
Confidence 45678999999999 245556889999999997 78777765 567776788888844422345556654
No 219
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=96.53 E-value=0.75 Score=51.96 Aligned_cols=141 Identities=11% Similarity=0.048 Sum_probs=94.1
Q ss_pred CcEEEEEe-CCCCCCCHHHHHHHHHhcccccCCCcEEEEE--ecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEe-CC
Q 001541 475 KPVILALA-RPDPKKNITTLVKAFGECRPLRELANLTLIM--GNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY-PK 550 (1057)
Q Consensus 475 ~~~Il~vG-Rl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIv--G~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f-~g 550 (1057)
+++-+-+| .-++.-+....++++.+.. ..++.+++ |=+. .+++|..++.+...++--.+++.. ..
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~----~~~~kIivPLsYg~-------~n~~Yi~~V~~~~~~lF~~~~~~iL~e 252 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQF----GDDVKIIVPLSYGA-------NNQAYIQQVIQAGKELFGAENFQILTE 252 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhc----CCCeEEEEECCCCC-------chHHHHHHHHHHHHHhcCccceeEhhh
Confidence 44545555 4678888888888887643 23455544 3332 245788889998888755556654 57
Q ss_pred CCCCCcHHHHHHHhhcCCcEEEEcC-CCCCCCHHHHHHHHcCCcEEEcCC-CCchhhhhcCCceEEe--CCCCHHHHHHH
Q 001541 551 HHKQSDVPEIYRLAAKTKGVFINPA-FIEPFGLTLIEAAAHGLPIVATKN-GGPVDIHRVLDNGLLV--DPHDQQSVADA 626 (1057)
Q Consensus 551 ~v~~~dl~~ly~~Aa~~~dv~v~ps-~~Egfgl~~lEAmA~G~PVVat~~-Gg~~eiv~~~~~Gllv--~p~d~~~la~a 626 (1057)
++|.+|..++++.| |+.++.. ...++|..+ =.+.+|+||+.+.. .-..++.+.+ --+++ +.-|...+.+|
T Consensus 253 ~mpf~eYl~lL~~c----Dl~if~~~RQQgiGnI~-lLl~~G~~v~L~~~np~~~~l~~~~-ipVlf~~d~L~~~~v~ea 326 (360)
T PF07429_consen 253 FMPFDEYLALLSRC----DLGIFNHNRQQGIGNIC-LLLQLGKKVFLSRDNPFWQDLKEQG-IPVLFYGDELDEALVREA 326 (360)
T ss_pred hCCHHHHHHHHHhC----CEEEEeechhhhHhHHH-HHHHcCCeEEEecCChHHHHHHhCC-CeEEeccccCCHHHHHHH
Confidence 99999999999999 9999997 567888754 46889999988774 4445554432 22333 44455666665
Q ss_pred HHHHHh
Q 001541 627 LLKLVA 632 (1057)
Q Consensus 627 I~~ll~ 632 (1057)
=+++..
T Consensus 327 ~rql~~ 332 (360)
T PF07429_consen 327 QRQLAN 332 (360)
T ss_pred HHHHhh
Confidence 555544
No 220
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=96.45 E-value=0.024 Score=70.39 Aligned_cols=55 Identities=13% Similarity=0.030 Sum_probs=48.6
Q ss_pred cceEEEEEecCCC------CCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 773 RKHIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 773 ~kkLi~~DiDGTL------~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
..+.+++..|+++ ...+.+..+++++.+++. |+.+++.||-....+..+.+++|+
T Consensus 425 G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~----Gi~v~miTGD~~~ta~~iA~~lGI 485 (675)
T TIGR01497 425 GGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRKM----GIKTIMITGDNRLTAAAIAAEAGV 485 (675)
T ss_pred CCeEEEEEECCEEEEEEEecccchhHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCC
Confidence 3467888888887 356788999999999997 999999999999999999999998
No 221
>PLN02534 UDP-glycosyltransferase
Probab=96.44 E-value=3.4 Score=50.01 Aligned_cols=92 Identities=20% Similarity=0.143 Sum_probs=56.6
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcE--EEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchh-----hhhcCCceEEeC
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGV--FINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVD-----IHRVLDNGLLVD 616 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv--~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~e-----iv~~~~~Gllv~ 616 (1057)
..+.+.+++|+.+ ++... ++ ||. -+-.++++||+++|+|+|+-...+-.- +++.-+.|+-+.
T Consensus 344 ~g~~v~~w~pq~~---iL~h~----~v~~fvt----H~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~ 412 (491)
T PLN02534 344 RGLLIKGWAPQVL---ILSHP----AIGGFLT----HCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVG 412 (491)
T ss_pred CCeeccCCCCHHH---HhcCC----ccceEEe----cCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEec
Confidence 3567789998854 56565 44 552 344568999999999999987543211 222223444331
Q ss_pred ---------------CCCHHHHHHHHHHHHhC-HHHHHHHHHHHHH
Q 001541 617 ---------------PHDQQSVADALLKLVAD-KQLWARCRQNGLK 646 (1057)
Q Consensus 617 ---------------p~d~~~la~aI~~ll~d-~~~~~~~~~~~~~ 646 (1057)
--+.++++++|++++.+ .++-+++++++.+
T Consensus 413 ~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~e 458 (491)
T PLN02534 413 VEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQE 458 (491)
T ss_pred ccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHH
Confidence 02578999999999962 2333445555443
No 222
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=96.38 E-value=0.0046 Score=69.19 Aligned_cols=65 Identities=8% Similarity=0.075 Sum_probs=48.5
Q ss_pred cceEEEEEecCCCC--CcchHHHHHHHHHHHhhhcCCCeEEEEECCCC---HHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 773 RKHIFVISVDCDST--TGLLDATKKICEAVEKERTEGSIGFILSTSMT---ISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 773 ~kkLi~~DiDGTL~--~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~---~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
|.++|+||+||||. ....+.+.++|+.|+++ |+.|+++|+|+ ...+...++.+|++. .++-++++
T Consensus 1 ~~~~~~~D~DGtl~~~~~~~~ga~e~l~~L~~~----g~~~~~~Tnns~~~~~~~~~~l~~~G~~~-~~~~i~ts 70 (279)
T TIGR01452 1 RAQGFIFDCDGVLWLGERVVPGAPELLDRLARA----GKAALFVTNNSTKSRAEYALKFARLGFNG-LAEQLFSS 70 (279)
T ss_pred CccEEEEeCCCceEcCCeeCcCHHHHHHHHHHC----CCeEEEEeCCCCCCHHHHHHHHHHcCCCC-ChhhEecH
Confidence 35789999999992 44455689999999986 89999999976 555556778888853 23445553
No 223
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=96.35 E-value=0.04 Score=67.84 Aligned_cols=138 Identities=14% Similarity=0.118 Sum_probs=104.6
Q ss_pred CCCCcEEEEEeCCCCCCCHHHHHHH----HHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEE
Q 001541 472 NPRKPVILALARPDPKKNITTLVKA----FGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVA 547 (1057)
Q Consensus 472 ~~~~~~Il~vGRl~~~Kgi~~Ll~A----~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~ 547 (1057)
+|+...++++=|+...|.....+.- +..+++ ...|.+.+|.|+...+... ........|+..++..+...+|.
T Consensus 484 ~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~-d~~prv~~iFaGKAhP~y~--~aK~iIk~I~~~a~~in~~lkVv 560 (750)
T COG0058 484 DPNALFDGQARRIHEYKRQLLNLLDIERLYRILKE-DWVPRVQIIFAGKAHPADY--AAKEIIKLINDVADVINNKLKVV 560 (750)
T ss_pred CCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhc-CCCCceEEEEeccCCCcch--HHHHHHHHHHHHHHhhcccceEE
Confidence 4678899999999999976654433 333332 2345666565555443332 23557788888888887777899
Q ss_pred eCCCCCCCcHHHHHHHhhcCCcEEEEcCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhh--cCCceEEeC
Q 001541 548 YPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHR--VLDNGLLVD 616 (1057)
Q Consensus 548 f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~--~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~--~~~~Gllv~ 616 (1057)
|+...+-.-..-++.+| ||-.+.|. .|..|..=+=|+.-|.|-|+|..|...|+.+ .+.||+++-
T Consensus 561 Fl~nYdvslA~~iipa~----Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG 629 (750)
T COG0058 561 FLPNYDVSLAELLIPAA----DVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFG 629 (750)
T ss_pred EeCCCChhHHHhhcccc----cccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeC
Confidence 99887666666677777 99999875 6888888889999999999999999999997 789999994
No 224
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.23 E-value=1.5 Score=48.74 Aligned_cols=136 Identities=16% Similarity=0.263 Sum_probs=77.1
Q ss_pred HHHhhhCCCCCcEEEE-Ee-----CCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHH
Q 001541 465 EIMRFFTNPRKPVILA-LA-----RPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLID 538 (1057)
Q Consensus 465 ~~~~~~~~~~~~~Il~-vG-----Rl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~ 538 (1057)
.+++.+..++.++|+. .- -....+++..+.+++.++.+ .. . +++ .++. ...+.++
T Consensus 172 vlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k---~g-i-V~i-pr~~-------------~~~eife 232 (346)
T COG1817 172 VLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKK---YG-I-VLI-PREK-------------EQAEIFE 232 (346)
T ss_pred HHHHcCCCCCCceEEEeeccccceeeccccchhhHHHHHHHHHh---Cc-E-EEe-cCch-------------hHHHHHh
Confidence 4555666666566543 11 12235677778888888753 22 2 233 2221 1223344
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCC---CchhhhhcCCceEEe
Q 001541 539 KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG---GPVDIHRVLDNGLLV 615 (1057)
Q Consensus 539 ~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~G---g~~eiv~~~~~Gllv 615 (1057)
.+. ++..+... .+.+.-+|. | +.++ .+-|.-.-||++.|+|.|++..| +.-+... +.|+++
T Consensus 233 ~~~---n~i~pk~~-vD~l~Llyy-a----~lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~~ 296 (346)
T COG1817 233 GYR---NIIIPKKA-VDTLSLLYY-A----TLVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLLY 296 (346)
T ss_pred hhc---cccCCccc-ccHHHHHhh-h----heee-----cCCchHHHHHHHhCCceEEecCCccccccHHHH--hcCcee
Confidence 332 23333321 122333444 4 4555 23466678999999999999855 3333332 468999
Q ss_pred CCCCHHHHHHHHHHHHhCHH
Q 001541 616 DPHDQQSVADALLKLVADKQ 635 (1057)
Q Consensus 616 ~p~d~~~la~aI~~ll~d~~ 635 (1057)
+-.|+.++.+...+.+.++.
T Consensus 297 ~s~~~~~~~~~a~~~l~~~~ 316 (346)
T COG1817 297 HSTDEIAIVEYAVRNLKYRR 316 (346)
T ss_pred ecCCHHHHHHHHHHHhhchh
Confidence 88888888887777777664
No 225
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=96.20 E-value=0.16 Score=57.53 Aligned_cols=111 Identities=15% Similarity=0.109 Sum_probs=66.1
Q ss_pred CCCCcEEEEEeCCCCCC--CHH---HHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCE
Q 001541 472 NPRKPVILALARPDPKK--NIT---TLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQV 546 (1057)
Q Consensus 472 ~~~~~~Il~vGRl~~~K--gi~---~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V 546 (1057)
.+...+.+.||.....- +-+ .+++.+..+.+... ..+ +|...+-... +....+.++.+ -.+.+
T Consensus 144 l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~~-~vttSRRTp~-------~~~~~L~~~~~---~~~~~ 211 (311)
T PF06258_consen 144 LPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GSL-LVTTSRRTPP-------EAEAALRELLK---DNPGV 211 (311)
T ss_pred CCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-CeE-EEEcCCCCcH-------HHHHHHHHhhc---CCCce
Confidence 34556677888755332 333 55555555543222 123 3555554322 22333444333 33566
Q ss_pred EeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC
Q 001541 547 AYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG 601 (1057)
Q Consensus 547 ~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg 601 (1057)
.+...-+..-+..+|..| |.+++|.-.-.| +.||+++|+||..-...+
T Consensus 212 ~~~~~~~~nPy~~~La~a----d~i~VT~DSvSM---vsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 212 YIWDGTGENPYLGFLAAA----DAIVVTEDSVSM---VSEAAATGKPVYVLPLPG 259 (311)
T ss_pred EEecCCCCCcHHHHHHhC----CEEEEcCccHHH---HHHHHHcCCCEEEecCCC
Confidence 444555566699999999 999999643222 689999999998877655
No 226
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=96.14 E-value=0.0067 Score=67.57 Aligned_cols=51 Identities=24% Similarity=0.169 Sum_probs=42.1
Q ss_pred ecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcce-EEEeCCCc
Q 001541 954 IPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHK-TVILKGIC 1007 (1057)
Q Consensus 954 ~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~-gVAMgNa~ 1007 (1057)
++..-.+...++++++++|++++++++ +||+.+ | ++|-+.+|. ++.+.++.
T Consensus 153 ~~~~Kp~p~~~~~~~~~~g~~~~~~l~-IGD~~~-D-i~aA~~aGi~~i~v~~G~ 204 (272)
T PRK13223 153 LPQKKPDPAALLFVMKMAGVPPSQSLF-VGDSRS-D-VLAAKAAGVQCVALSYGY 204 (272)
T ss_pred CCCCCCCcHHHHHHHHHhCCChhHEEE-ECCCHH-H-HHHHHHCCCeEEEEecCC
Confidence 455566788999999999999999998 888888 9 999999997 45665543
No 227
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=96.12 E-value=0.0089 Score=56.02 Aligned_cols=52 Identities=13% Similarity=0.106 Sum_probs=41.9
Q ss_pred EEEEecCCC--CCcchHHHHHHHHHHHhhhcCCCeEEEEEC---CCCHHHHHHHHHhCCCC
Q 001541 777 FVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILST---SMTISEIHSFLVSGHLS 832 (1057)
Q Consensus 777 i~~DiDGTL--~~~i~~~t~~al~~l~~~~~~~gi~~vIaT---GR~~~~i~~~l~~lgl~ 832 (1057)
|+||+|||| ...+-+...++|++|++. |..|++.| +|+.......|+.+|++
T Consensus 1 ~l~D~dGvl~~g~~~ipga~e~l~~L~~~----g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGAVEALDALRER----GKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp EEEESTTTSEETTEE-TTHHHHHHHHHHT----TSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred CEEeCccEeEeCCCcCcCHHHHHHHHHHc----CCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 689999999 355667889999999997 78888876 56777888888999995
No 228
>PLN03015 UDP-glucosyl transferase
Probab=95.93 E-value=5.7 Score=47.77 Aligned_cols=92 Identities=16% Similarity=0.176 Sum_probs=55.8
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hhhh-hcCCceEEeC----
Q 001541 546 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----VDIH-RVLDNGLLVD---- 616 (1057)
Q Consensus 546 V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~----~eiv-~~~~~Gllv~---- 616 (1057)
+.+.+++||.++.. ..+ .+.||. -+--++.+||+.+|+|+|+-..-+- ...+ +..+.|+-+.
T Consensus 337 l~v~~W~PQ~~vL~---h~~--vg~fvt----H~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~ 407 (470)
T PLN03015 337 LVVTQWAPQVEILS---HRS--IGGFLS----HCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPS 407 (470)
T ss_pred eEEEecCCHHHHhc---cCc--cCeEEe----cCCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEeccccc
Confidence 55678888876544 431 034552 2333588999999999999775431 1222 3345566663
Q ss_pred --CCCHHHHHHHHHHHHhC-HHHHHHHHHHHHH
Q 001541 617 --PHDQQSVADALLKLVAD-KQLWARCRQNGLK 646 (1057)
Q Consensus 617 --p~d~~~la~aI~~ll~d-~~~~~~~~~~~~~ 646 (1057)
.-..++++++|++++.. .++-+++++++++
T Consensus 408 ~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~ 440 (470)
T PLN03015 408 EKVIGREEVASLVRKIVAEEDEEGQKIRAKAEE 440 (470)
T ss_pred CCccCHHHHHHHHHHHHccCcccHHHHHHHHHH
Confidence 13678999999999952 1233455555443
No 229
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=95.92 E-value=0.02 Score=51.20 Aligned_cols=36 Identities=31% Similarity=0.320 Sum_probs=29.7
Q ss_pred CcceEEEEcCCCc--hHHHHHHHhcCCCCEEEEecCCc
Q 001541 305 VWPVAIHGHYADA--GDSAALLSGALNVPMLFTGHSLG 340 (1057)
Q Consensus 305 ~~pDvIh~h~~~~--~~~a~~l~~~~~iP~V~t~H~l~ 340 (1057)
++.||||+|.+.+ +.-+.+.++.+|++.|+|-||+.
T Consensus 49 E~I~IVHgH~a~S~l~hE~i~hA~~mGlktVfTDHSLf 86 (90)
T PF08288_consen 49 ERIDIVHGHQAFSTLCHEAILHARTMGLKTVFTDHSLF 86 (90)
T ss_pred cCeeEEEeehhhhHHHHHHHHHHHhCCCcEEeeccccc
Confidence 5799999998744 33467778899999999999984
No 230
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=95.91 E-value=0.092 Score=68.66 Aligned_cols=42 Identities=10% Similarity=0.111 Sum_probs=39.2
Q ss_pred CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCC
Q 001541 787 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 832 (1057)
Q Consensus 787 ~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~ 832 (1057)
..+.+.++++|+++++. |+.+++.||-+...+..+.+++|+.
T Consensus 578 Dplr~~~~~aI~~l~~a----GI~v~miTGD~~~tA~~iA~~~GI~ 619 (941)
T TIGR01517 578 DPLRPGVREAVQECQRA----GITVRMVTGDNIDTAKAIARNCGIL 619 (941)
T ss_pred CCCchhHHHHHHHHHHC----CCEEEEECCCChHHHHHHHHHcCCC
Confidence 67788999999999997 9999999999999999999999983
No 231
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=95.89 E-value=0.036 Score=72.17 Aligned_cols=41 Identities=10% Similarity=-0.023 Sum_probs=38.1
Q ss_pred CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 787 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 787 ~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
..+.+.++++|+.+++. |+.++++||.+...+..+.+++|+
T Consensus 536 Dplr~~v~e~I~~l~~a----GI~v~miTGD~~~tA~~ia~~~gi 576 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTA----GIRVIMITGDNKETAEAICRRIGI 576 (917)
T ss_pred CCCchhHHHHHHHHHHC----CCEEEEecCCCHHHHHHHHHHcCC
Confidence 45678999999999986 999999999999999999999998
No 232
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=95.88 E-value=0.036 Score=68.28 Aligned_cols=55 Identities=16% Similarity=0.204 Sum_probs=48.5
Q ss_pred cceEEEEEecCCC------CCcchHHHHHHHHHHHhhhcCCC-eEEEEECCCCHHHHHHHHHhCCC
Q 001541 773 RKHIFVISVDCDS------TTGLLDATKKICEAVEKERTEGS-IGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 773 ~kkLi~~DiDGTL------~~~i~~~t~~al~~l~~~~~~~g-i~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
..+.++++.||++ ...+-+..+++|+.|+++ | +.++|+||.+...+..+++++|+
T Consensus 363 g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~~----g~i~v~ivTgd~~~~a~~i~~~lgi 424 (556)
T TIGR01525 363 GKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRA----GGIKLVMLTGDNRSAAEAVAAELGI 424 (556)
T ss_pred CcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHHc----CCCeEEEEeCCCHHHHHHHHHHhCC
Confidence 3567888999987 256788999999999987 7 99999999999999999999998
No 233
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=95.86 E-value=0.032 Score=70.90 Aligned_cols=55 Identities=9% Similarity=0.029 Sum_probs=49.0
Q ss_pred cceEEEEEecCCC------CCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 773 RKHIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 773 ~kkLi~~DiDGTL------~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
.++.+++..|+++ ...+-+..+++|+.|++. |+.+++.||.+...+..+.+++|+
T Consensus 547 g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~----gi~~~llTGd~~~~a~~ia~~lgi 607 (741)
T PRK11033 547 GKTVVLVLRNDDVLGLIALQDTLRADARQAISELKAL----GIKGVMLTGDNPRAAAAIAGELGI 607 (741)
T ss_pred CCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCC
Confidence 3567888899987 367888999999999987 899999999999999999999998
No 234
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=95.82 E-value=0.12 Score=67.06 Aligned_cols=56 Identities=7% Similarity=-0.020 Sum_probs=47.5
Q ss_pred cceEEEEEecC-----CC------CCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCC
Q 001541 773 RKHIFVISVDC-----DS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 832 (1057)
Q Consensus 773 ~kkLi~~DiDG-----TL------~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~ 832 (1057)
..|.++++++. ++ ...+-+.++++|+.+++. |+.+++.||-+...+..+.+++|+.
T Consensus 502 G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~----Gi~v~miTGD~~~tA~~ia~~~Gi~ 568 (884)
T TIGR01522 502 GLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLITG----GVRIIMITGDSQETAVSIARRLGMP 568 (884)
T ss_pred CCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCCC
Confidence 35677777765 33 267788999999999986 9999999999999999999999983
No 235
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=95.79 E-value=0.072 Score=57.14 Aligned_cols=46 Identities=17% Similarity=0.145 Sum_probs=39.0
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcce-EEEeCCCc
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHK-TVILKGIC 1007 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~-gVAMgNa~ 1007 (1057)
.+..+++.++++++++++++++ +||+.+ | ++|.+.+|. +|.+..+.
T Consensus 150 p~~~~~~~~~~~~~~~~~~~i~-igD~~~-D-i~~a~~~g~~~i~v~~g~ 196 (226)
T PRK13222 150 PDPAPLLLACEKLGLDPEEMLF-VGDSRN-D-IQAARAAGCPSVGVTYGY 196 (226)
T ss_pred cChHHHHHHHHHcCCChhheEE-ECCCHH-H-HHHHHHCCCcEEEECcCC
Confidence 3578999999999999999998 899988 9 999999997 56665443
No 236
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=95.77 E-value=0.047 Score=57.62 Aligned_cols=46 Identities=22% Similarity=0.177 Sum_probs=41.3
Q ss_pred CCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeC
Q 001541 956 VLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 1004 (1057)
Q Consensus 956 ~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMg 1004 (1057)
.+-.|..+++.++++.+++++++++ +||+.+ | ++|++.+|.++++.
T Consensus 152 ~g~~K~~~l~~~~~~~~~~~~~~~~-~gDs~~-D-~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 152 KGEGKVHALAELLAEEQIDLKDSYA-YGDSIS-D-LPLLSLVGHPYVVN 197 (202)
T ss_pred CChHHHHHHHHHHHHcCCCHHHcEe-eeCCcc-c-HHHHHhCCCcEEeC
Confidence 3557999999999999999999999 788888 8 99999999999886
No 237
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=95.75 E-value=6.5 Score=47.14 Aligned_cols=154 Identities=12% Similarity=0.098 Sum_probs=81.8
Q ss_pred HHHhhhCCC--CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccc-hhhHHHHHHHHHHHHH
Q 001541 465 EIMRFFTNP--RKPVILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMS-STSASVLLSVLKLIDK 539 (1057)
Q Consensus 465 ~~~~~~~~~--~~~~Il~vGRl~--~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~-~~~~~~~~~l~~l~~~ 539 (1057)
+..+++... +..+.+++|.+. +.+-+..+..+++.+.. .+..++......+... ..............++
T Consensus 250 ~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~-----~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~ 324 (455)
T PLN02152 250 SYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKR-----PFLWVITDKLNREAKIEGEEETEIEKIAGFRHE 324 (455)
T ss_pred HHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCC-----CeEEEEecCcccccccccccccccccchhHHHh
Confidence 345555332 356778888754 35567778888887731 3434555321100000 0000000001122222
Q ss_pred cCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhhhc-CCceEE
Q 001541 540 YDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRV-LDNGLL 614 (1057)
Q Consensus 540 ~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv~~-~~~Gll 614 (1057)
. .++..+.+++|+.+ +++.. .|-++-+ -+-.++++||+.+|+|+|+-...+ ....+.+ -+.|+-
T Consensus 325 ~--~~~g~v~~W~PQ~~---iL~h~----~vg~fvt--H~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~ 393 (455)
T PLN02152 325 L--EEVGMIVSWCSQIE---VLRHR----AVGCFVT--HCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVR 393 (455)
T ss_pred c--cCCeEEEeeCCHHH---HhCCc----ccceEEe--eCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEE
Confidence 2 24556678988774 55555 3322222 233468899999999999976543 1222222 134555
Q ss_pred eC-----CCCHHHHHHHHHHHHhCH
Q 001541 615 VD-----PHDQQSVADALLKLVADK 634 (1057)
Q Consensus 615 v~-----p~d~~~la~aI~~ll~d~ 634 (1057)
+. .-+.++++++|.+++.++
T Consensus 394 ~~~~~~~~~~~e~l~~av~~vm~~~ 418 (455)
T PLN02152 394 VRENSEGLVERGEIRRCLEAVMEEK 418 (455)
T ss_pred eecCcCCcCcHHHHHHHHHHHHhhh
Confidence 42 126799999999999754
No 238
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=95.74 E-value=0.067 Score=65.87 Aligned_cols=55 Identities=11% Similarity=0.132 Sum_probs=48.8
Q ss_pred cceEEEEEecCCC------CCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 773 RKHIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 773 ~kkLi~~DiDGTL------~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
....++++.||++ ...+.+..+++|++|++. |+.++++||.+...+..+++.+|+
T Consensus 384 g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~----Gi~v~ilSgd~~~~a~~ia~~lgi 444 (562)
T TIGR01511 384 GSTSVLVAVNGELAGVFALEDQLRPEAKEVIQALKRR----GIEPVMLTGDNRKTAKAVAKELGI 444 (562)
T ss_pred CCEEEEEEECCEEEEEEEecccccHHHHHHHHHHHHc----CCeEEEEcCCCHHHHHHHHHHcCC
Confidence 3567889999988 366788999999999987 899999999999999999999987
No 239
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=95.73 E-value=0.11 Score=67.36 Aligned_cols=41 Identities=15% Similarity=-0.010 Sum_probs=38.7
Q ss_pred CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 787 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 787 ~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
..+-+.++++|+++++. |+.+++.||-+...+..+.+++|+
T Consensus 514 Dp~R~~~~~aI~~l~~a----GI~vvmiTGD~~~tA~aIA~~lGI 554 (867)
T TIGR01524 514 DPPKESTKEAIAALFKN----GINVKVLTGDNEIVTARICQEVGI 554 (867)
T ss_pred CCCchhHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCC
Confidence 56788999999999997 999999999999999999999998
No 240
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=95.70 E-value=0.15 Score=65.16 Aligned_cols=56 Identities=9% Similarity=-0.061 Sum_probs=46.4
Q ss_pred cceEEEEEe---cCCC--------CCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCC
Q 001541 773 RKHIFVISV---DCDS--------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 832 (1057)
Q Consensus 773 ~kkLi~~Di---DGTL--------~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~ 832 (1057)
..+.+++++ ++.| ...+-+.++++|+++++. |+.+++.||-+...+..+.+++|+.
T Consensus 416 G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~a----GI~v~miTGD~~~tA~~IA~~lGI~ 482 (755)
T TIGR01647 416 GYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERARHL----GVEVKMVTGDHLAIAKETARRLGLG 482 (755)
T ss_pred CCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCCC
Confidence 345667666 3333 367888999999999997 9999999999999999999999983
No 241
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=95.64 E-value=0.087 Score=65.59 Aligned_cols=54 Identities=11% Similarity=0.038 Sum_probs=48.0
Q ss_pred ceEEEEEecCCC------CCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 774 KHIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 774 kkLi~~DiDGTL------~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
.+.+++..|+++ ...+.+..++++++|++. |+.++++||=+...+..+.+++|+
T Consensus 425 ~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~Lr~~----GI~vvMiTGDn~~TA~aIA~elGI 484 (679)
T PRK01122 425 GTPLVVAEDNRVLGVIYLKDIVKPGIKERFAELRKM----GIKTVMITGDNPLTAAAIAAEAGV 484 (679)
T ss_pred CcEEEEEECCeEEEEEEEeccCchhHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 456778888887 256788999999999997 999999999999999999999998
No 242
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=95.64 E-value=0.028 Score=56.63 Aligned_cols=50 Identities=14% Similarity=0.230 Sum_probs=40.1
Q ss_pred EEEEEecCCCCCc--------------chHHHHHHHHHHHhhhcCCCeEEEEECCCCHHH---HHHHHHhC
Q 001541 776 IFVISVDCDSTTG--------------LLDATKKICEAVEKERTEGSIGFILSTSMTISE---IHSFLVSG 829 (1057)
Q Consensus 776 Li~~DiDGTL~~~--------------i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~---i~~~l~~l 829 (1057)
+|++|||||+|+. ..+...+...+++++ |..|+..|+|+... ++.||...
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~----GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADN----GYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHC----CeEEEEECcCcHHHHHHHHHHHHHH
Confidence 4899999999632 456677888888886 99999999999764 46788877
No 243
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=95.62 E-value=0.052 Score=71.75 Aligned_cols=41 Identities=15% Similarity=0.098 Sum_probs=38.7
Q ss_pred CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 787 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 787 ~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
..+.+.++++|+.+++. ||.++++||.+...+..+.+++|+
T Consensus 655 d~lr~~~~~~I~~l~~a----gi~v~miTGD~~~TA~~iA~~~gi 695 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRA----SIRTVMITGDNPLTAVHVARECGI 695 (1054)
T ss_pred cCCCccHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 56888999999999997 999999999999999999999998
No 244
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=95.56 E-value=0.14 Score=57.09 Aligned_cols=42 Identities=24% Similarity=0.235 Sum_probs=36.2
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEe
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 1003 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAM 1003 (1057)
.|..++.++++++|++++++++ +||+.+ | +.+=..+|..+++
T Consensus 196 ~k~~~~~~~l~~~~~~p~~~l~-IGDs~~-D-i~aA~~AG~~~I~ 237 (273)
T PRK13225 196 SKRRALSQLVAREGWQPAAVMY-VGDETR-D-VEAARQVGLIAVA 237 (273)
T ss_pred CCHHHHHHHHHHhCcChhHEEE-ECCCHH-H-HHHHHHCCCeEEE
Confidence 4678999999999999999988 899988 9 9999989976543
No 245
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=95.56 E-value=0.092 Score=68.06 Aligned_cols=41 Identities=10% Similarity=-0.052 Sum_probs=38.7
Q ss_pred CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 787 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 787 ~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
..+.+.++++|+++++. |+.+++.||=+...+..+.+++|+
T Consensus 549 Dp~R~~a~~aI~~l~~a----GI~v~miTGD~~~tA~~IA~~lGI 589 (902)
T PRK10517 549 DPPKETTAPALKALKAS----GVTVKILTGDSELVAAKVCHEVGL 589 (902)
T ss_pred CcchhhHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCC
Confidence 66788999999999997 999999999999999999999998
No 246
>PRK14986 glycogen phosphorylase; Provisional
Probab=95.54 E-value=0.06 Score=67.16 Aligned_cols=149 Identities=12% Similarity=0.123 Sum_probs=106.9
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCCCCcccchhhHHHHHHHHHHHH----Hc
Q 001541 471 TNPRKPVILALARPDPKKNITT-LVKAFGECRPLRELA-----NLTLIMGNRDGIDEMSSTSASVLLSVLKLID----KY 540 (1057)
Q Consensus 471 ~~~~~~~Il~vGRl~~~Kgi~~-Ll~A~~~l~~~~~~~-----~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~----~~ 540 (1057)
.+|+...++++-|+...|.... ++..+.++......| .+++|.|+...+... ....+...|..+++ .-
T Consensus 539 ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~--~aK~iIk~I~~va~~in~Dp 616 (815)
T PRK14986 539 VNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYY--MAKHIIHLINDVAKVINNDP 616 (815)
T ss_pred cCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcH--HHHHHHHHHHHHHHHhccCh
Confidence 5677888999999999998887 666655554333332 244555544332221 23456777777777 22
Q ss_pred CCCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhhc--CCceEE
Q 001541 541 DLYG--QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV--LDNGLL 614 (1057)
Q Consensus 541 ~l~~--~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~--~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~--~~~Gll 614 (1057)
.+.+ +|.|+....-+--..++.+| ||-.+.|. .|..|..=+=+|.-|.+.++|..|...|+.++ ++||++
T Consensus 617 ~v~~~lkVVFlenY~vslAe~lipg~----Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~ 692 (815)
T PRK14986 617 QIGDKLKVVFIPNYSVSLAQLIIPAA----DLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFI 692 (815)
T ss_pred hhcCceeEEEeCCCCHHHHHHhhhhh----hhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEE
Confidence 3344 78888887666666777777 99999885 78889888999999999999999999999986 789999
Q ss_pred eCCCCHHHHHHH
Q 001541 615 VDPHDQQSVADA 626 (1057)
Q Consensus 615 v~p~d~~~la~a 626 (1057)
+- .+.+++.+-
T Consensus 693 fG-~~~~ev~~~ 703 (815)
T PRK14986 693 FG-NTAEEVEAL 703 (815)
T ss_pred eC-CCHHHHHHH
Confidence 95 366665543
No 247
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=95.53 E-value=0.05 Score=54.86 Aligned_cols=78 Identities=14% Similarity=0.012 Sum_probs=46.6
Q ss_pred CcceEEEEcCC-CchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEe
Q 001541 305 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 383 (1057)
Q Consensus 305 ~~pDvIh~h~~-~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~ 383 (1057)
..+|+|.+.+. +...+..+.....++|.++.+|.....+-.. +...-...|.+.. -.+.-.||.|+.
T Consensus 58 ~~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQl~YP~~-------~~~~rd~~~~~~n-----i~saLaAD~v~F 125 (168)
T PF12038_consen 58 HSYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQLAYPVS-------PGQERDFQYGMNN-----IYSALAADRVVF 125 (168)
T ss_pred cCCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCcccCCCC-------CCccccccHHHHH-----HHHHHhceeeee
Confidence 45799999875 4444444444556899999999853322100 0011111222222 235678999999
Q ss_pred cCHHHHHHHHh
Q 001541 384 STRQEIEEQWR 394 (1057)
Q Consensus 384 ~S~~~~~~~~~ 394 (1057)
+|....+.+..
T Consensus 126 NS~~nr~sFL~ 136 (168)
T PF12038_consen 126 NSAFNRDSFLD 136 (168)
T ss_pred cchhhHHHHHH
Confidence 99877776554
No 248
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=95.52 E-value=0.057 Score=71.02 Aligned_cols=41 Identities=7% Similarity=-0.026 Sum_probs=38.4
Q ss_pred CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 787 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 787 ~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
..+.+.++++|+.+++. ||.+++.||.....+..+.+++|+
T Consensus 645 Dp~r~~v~~aI~~l~~a----GIkv~MiTGD~~~tA~~iA~~~Gi 685 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQA----GINVHMLTGDFPETAKAIAQEVGI 685 (1053)
T ss_pred cCCchhHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHcCC
Confidence 55778999999999997 999999999999999999999998
No 249
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=95.51 E-value=0.023 Score=62.08 Aligned_cols=67 Identities=7% Similarity=0.012 Sum_probs=49.8
Q ss_pred CcceEEEEEecCCCC--CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCH--HHHHHHHHhCCCCCCCCCeEEeC
Q 001541 772 RRKHIFVISVDCDST--TGLLDATKKICEAVEKERTEGSIGFILSTSMTI--SEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL~--~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~--~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
.+.++++||+||||. ..+.+.+.++|++|+++ |+.++|+|.-+. ..+.+.++.+|+....++.++++
T Consensus 6 ~~~~~~~~D~dG~l~~~~~~~pga~e~L~~L~~~----G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s 76 (242)
T TIGR01459 6 NDYDVFLLDLWGVIIDGNHTYPGAVQNLNKIIAQ----GKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISS 76 (242)
T ss_pred hcCCEEEEecccccccCCccCccHHHHHHHHHHC----CCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEcc
Confidence 346789999999993 55678999999999987 898989765444 34447899999952145655553
No 250
>PRK11590 hypothetical protein; Provisional
Probab=95.48 E-value=0.064 Score=57.37 Aligned_cols=44 Identities=16% Similarity=0.028 Sum_probs=33.9
Q ss_pred cCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeC
Q 001541 955 PVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 1004 (1057)
Q Consensus 955 p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMg 1004 (1057)
..|..|...|+.++ |.+.+..++ -||+.+ | ++||+.|++++++.
T Consensus 159 c~g~~K~~~l~~~~---~~~~~~~~a-Y~Ds~~-D-~pmL~~a~~~~~vn 202 (211)
T PRK11590 159 CLGHEKVAQLERKI---GTPLRLYSG-YSDSKQ-D-NPLLYFCQHRWRVT 202 (211)
T ss_pred CCChHHHHHHHHHh---CCCcceEEE-ecCCcc-c-HHHHHhCCCCEEEC
Confidence 45556776666554 667777777 788888 8 99999999999985
No 251
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=95.34 E-value=0.044 Score=59.34 Aligned_cols=40 Identities=20% Similarity=0.123 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 001541 960 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 1002 (1057)
Q Consensus 960 Kg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVA 1002 (1057)
+...+.++++++|++++++++ +||+.+ | +.+-+.+|..++
T Consensus 153 ~p~~~~~~~~~l~~~p~~~l~-IGDs~~-D-i~aA~~aG~~~i 192 (229)
T PRK13226 153 HPLPLLVAAERIGVAPTDCVY-VGDDER-D-ILAARAAGMPSV 192 (229)
T ss_pred CHHHHHHHHHHhCCChhhEEE-eCCCHH-H-HHHHHHCCCcEE
Confidence 456799999999999999998 888888 8 999999997654
No 252
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=95.27 E-value=0.16 Score=65.96 Aligned_cols=41 Identities=7% Similarity=-0.048 Sum_probs=38.8
Q ss_pred CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 787 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 787 ~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
..+-+.++++|+++++. ||.+++.||=+...+..+.+++|+
T Consensus 549 Dp~R~~a~~aI~~l~~a----GI~v~miTGD~~~tA~aIA~~lGI 589 (903)
T PRK15122 549 DPPKESAAPAIAALREN----GVAVKVLTGDNPIVTAKICREVGL 589 (903)
T ss_pred CccHHHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 66788999999999997 999999999999999999999998
No 253
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=95.27 E-value=0.15 Score=63.65 Aligned_cols=140 Identities=16% Similarity=0.183 Sum_probs=100.4
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCCCCcccchhhHHHHHHHHHHHHHcC---
Q 001541 471 TNPRKPVILALARPDPKKNITT-LVKAFGECRPLRELA-----NLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYD--- 541 (1057)
Q Consensus 471 ~~~~~~~Il~vGRl~~~Kgi~~-Ll~A~~~l~~~~~~~-----~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~--- 541 (1057)
.+|+...++++-|+...|.... ++....++......| ..++|.|+...+... ....+...|+.+++..+
T Consensus 525 ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~--~aK~iIklI~~va~~in~Dp 602 (798)
T PRK14985 525 INPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYY--LAKNIIFAINKVAEVINNDP 602 (798)
T ss_pred cCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcH--HHHHHHHHHHHHHHHhcCCh
Confidence 5677788999999999998777 666655554333332 245555544332221 12445666777765542
Q ss_pred -CCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhhc--CCceEE
Q 001541 542 -LYG--QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV--LDNGLL 614 (1057)
Q Consensus 542 -l~~--~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~--~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~--~~~Gll 614 (1057)
..+ +|.|+....-+-...++.+| ||-.+.|. .|..|..=+=+|.-|.+.++|-.|...|+.+. ++||++
T Consensus 603 ~v~~~lkVVFlenY~VslAe~lipaa----Dvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~ 678 (798)
T PRK14985 603 LVGDKLKVVFLPDYCVSAAELLIPAA----DISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFI 678 (798)
T ss_pred hhCCceeEEEeCCCChHHHHHHhhhh----hhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEE
Confidence 334 78898887666667777777 99999885 78888888899999999999999999999875 678988
Q ss_pred eC
Q 001541 615 VD 616 (1057)
Q Consensus 615 v~ 616 (1057)
+-
T Consensus 679 fG 680 (798)
T PRK14985 679 FG 680 (798)
T ss_pred eC
Confidence 83
No 254
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=95.16 E-value=0.024 Score=61.71 Aligned_cols=64 Identities=13% Similarity=0.093 Sum_probs=50.7
Q ss_pred EEEEecCCC--CCcchHHHHHHHHHHHhhhcCCCeEEEEEC---CCCHHHHHHHHHh-CCCCCCCCCeEEeCCCc
Q 001541 777 FVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILST---SMTISEIHSFLVS-GHLSPSDFDAFICNSGS 845 (1057)
Q Consensus 777 i~~DiDGTL--~~~i~~~t~~al~~l~~~~~~~gi~~vIaT---GR~~~~i~~~l~~-lgl~~~~~D~lI~~nGa 845 (1057)
++||+|||| ...+.+.+.++|+.++++ |+.+++.| ||+...+.+.|.+ +|++. .++-+|++..+
T Consensus 1 ~lfD~DGvL~~~~~~~~~a~e~i~~l~~~----g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~-~~~~iits~~~ 70 (236)
T TIGR01460 1 FLFDIDGVLWLGHKPIPGAAEALNRLRAK----GKPVVFLTNNSSRSEEDYAEKLSSLLGVDV-SPDQIITSGSV 70 (236)
T ss_pred CEEeCcCccCcCCccCcCHHHHHHHHHHC----CCeEEEEECCCCCCHHHHHHHHHHhcCCCC-CHHHeeeHHHH
Confidence 579999999 344455889999999986 78888887 9999999999988 78753 46667776443
No 255
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=95.14 E-value=0.37 Score=59.57 Aligned_cols=140 Identities=12% Similarity=0.165 Sum_probs=85.9
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HH---HHHHhccccc--CCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHc----
Q 001541 471 TNPRKPVILALARPDPKKNITT-LV---KAFGECRPLR--ELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY---- 540 (1057)
Q Consensus 471 ~~~~~~~Il~vGRl~~~Kgi~~-Ll---~A~~~l~~~~--~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~---- 540 (1057)
.+|+...++++-|+...|.... ++ .-+.+++... ....+++|.|+...+... ...++...|..+++..
T Consensus 440 ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~--~gK~iIk~I~~va~~in~Dp 517 (713)
T PF00343_consen 440 LDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDY--MGKEIIKLINNVAEVINNDP 517 (713)
T ss_dssp --TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-H--HHHHHHHHHHHHHHHHCT-T
T ss_pred CCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcH--HHHHHHHHHHHHHHHHhcCh
Confidence 4677788999999999998776 33 4444554321 112345555544333221 1234556666665532
Q ss_pred CCCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhhc--CCceEE
Q 001541 541 DLYG--QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV--LDNGLL 614 (1057)
Q Consensus 541 ~l~~--~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~--~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~--~~~Gll 614 (1057)
.+.+ +|.|+...+-.-...++..| ||-++.|. .|..|..-+=+|.-|.+.++|..|...|+.+. .+|.++
T Consensus 518 ~v~~~lkVvFlenYdvslA~~lipg~----DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fi 593 (713)
T PF00343_consen 518 EVGDRLKVVFLENYDVSLAEKLIPGV----DVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFI 593 (713)
T ss_dssp TTCCGEEEEEETT-SHHHHHHHGGG-----SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEE
T ss_pred hhccceeEEeecCCcHHHHHHHhhhh----hhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEE
Confidence 3334 68888877655566666777 99999985 79999999999999999999999999999864 357777
Q ss_pred eC
Q 001541 615 VD 616 (1057)
Q Consensus 615 v~ 616 (1057)
+-
T Consensus 594 FG 595 (713)
T PF00343_consen 594 FG 595 (713)
T ss_dssp ES
T ss_pred cC
Confidence 73
No 256
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=95.00 E-value=0.14 Score=64.15 Aligned_cols=148 Identities=15% Similarity=0.136 Sum_probs=105.9
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCCCCcccchhhHHHHHHHHHHHHHc----
Q 001541 471 TNPRKPVILALARPDPKKNITT-LVKAFGECRPLRELA-----NLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY---- 540 (1057)
Q Consensus 471 ~~~~~~~Il~vGRl~~~Kgi~~-Ll~A~~~l~~~~~~~-----~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~---- 540 (1057)
.+|+...++++-|+...|.... ++..+.++.+....| ..++|.|+...+... ....+...|..+++..
T Consensus 526 ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~--~aK~iIklI~~va~~in~Dp 603 (797)
T cd04300 526 VDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYY--MAKLIIKLINAVADVVNNDP 603 (797)
T ss_pred cCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcH--HHHHHHHHHHHHHHHhccCh
Confidence 4678889999999999998877 666554443333332 245555554433222 1245666777777642
Q ss_pred CCCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhhc--CCceEE
Q 001541 541 DLYG--QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV--LDNGLL 614 (1057)
Q Consensus 541 ~l~~--~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~--~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~--~~~Gll 614 (1057)
.+.+ +|.|+....-+-...++.+| ||-.+.|. .|..|..=+=+|.-|.+.++|..|...|+.+. .+|+++
T Consensus 604 ~v~~~lkVVFlenY~VslAe~iipaa----Dvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fi 679 (797)
T cd04300 604 DVGDKLKVVFLPNYNVSLAEKIIPAA----DLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFI 679 (797)
T ss_pred hcCCceEEEEeCCCChHHHHHhhhhh----hhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEE
Confidence 3344 78898887666666777777 99999885 68888888889999999999999999999987 789999
Q ss_pred eCCCCHHHHHH
Q 001541 615 VDPHDQQSVAD 625 (1057)
Q Consensus 615 v~p~d~~~la~ 625 (1057)
|- .+.+++.+
T Consensus 680 FG-~~~~ev~~ 689 (797)
T cd04300 680 FG-LTAEEVEA 689 (797)
T ss_pred eC-CCHHHHHH
Confidence 95 35555543
No 257
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=94.91 E-value=0.11 Score=64.95 Aligned_cols=52 Identities=13% Similarity=0.123 Sum_probs=48.1
Q ss_pred EEEEEecCCC------CCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 776 IFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 776 Li~~DiDGTL------~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
++++.+||.+ ...+-+..+++|++|++. |+.+++.||=+...++.+.+++|+
T Consensus 519 ~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~~~----Gi~~~mLTGDn~~~A~~iA~~lGI 576 (713)
T COG2217 519 VVFVAVDGKLVGVIALADELRPDAKEAIAALKAL----GIKVVMLTGDNRRTAEAIAKELGI 576 (713)
T ss_pred EEEEEECCEEEEEEEEeCCCChhHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCh
Confidence 7999999977 367889999999999997 999999999999999999999998
No 258
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=94.87 E-value=0.2 Score=51.86 Aligned_cols=41 Identities=10% Similarity=0.067 Sum_probs=32.0
Q ss_pred ecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceE
Q 001541 954 IPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKT 1000 (1057)
Q Consensus 954 ~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~g 1000 (1057)
.+.|..|+..++.+...+ .+++++ +||+.+ | ++|.+.++.-
T Consensus 144 ~~~g~~K~~~~~~~~~~~---~~~~i~-iGD~~~-D-~~aa~~~d~~ 184 (188)
T TIGR01489 144 CPCGCCKGKVIHKLSEPK---YQHIIY-IGDGVT-D-VCPAKLSDVV 184 (188)
T ss_pred CCCCCCHHHHHHHHHhhc---CceEEE-ECCCcc-h-hchHhcCCcc
Confidence 356778999999998875 566666 899999 9 9888877543
No 259
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=94.76 E-value=0.18 Score=62.83 Aligned_cols=53 Identities=9% Similarity=0.046 Sum_probs=45.2
Q ss_pred eEEEEEecCCC------CCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 775 HIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 775 kLi~~DiDGTL------~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
+.+++..|+++ ...+.+..++++++|++. |+.+++.||-+...+..+.+++|+
T Consensus 422 ~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~----GI~vvMiTGDn~~TA~aIA~elGI 480 (673)
T PRK14010 422 TPLVVLEDNEILGVIYLKDVIKDGLVERFRELREM----GIETVMCTGDNELTAATIAKEAGV 480 (673)
T ss_pred eEEEEEECCEEEEEEEeecCCcHHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 34455557776 256788999999999987 999999999999999999999998
No 260
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=94.75 E-value=0.076 Score=57.68 Aligned_cols=36 Identities=8% Similarity=0.143 Sum_probs=30.2
Q ss_pred HHHHHHHHHhhhcCCCeEEEEECCC----CHHHHHHHHHhCCCC
Q 001541 793 TKKICEAVEKERTEGSIGFILSTSM----TISEIHSFLVSGHLS 832 (1057)
Q Consensus 793 t~~al~~l~~~~~~~gi~~vIaTGR----~~~~i~~~l~~lgl~ 832 (1057)
.++.|+.++++ |+.++|+|+| .-..+..+++.+|++
T Consensus 119 a~elL~~l~~~----G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 119 ARQLIDMHQRR----GDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred HHHHHHHHHHC----CCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 67788888886 8999999999 556788888889994
No 261
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=94.73 E-value=0.15 Score=66.19 Aligned_cols=42 Identities=10% Similarity=0.060 Sum_probs=38.8
Q ss_pred CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCC
Q 001541 787 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 832 (1057)
Q Consensus 787 ~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~ 832 (1057)
..+.+.++++|+.++++ ||.+.++||=....+..+.+++|+.
T Consensus 546 Dppr~~v~~aI~~l~~A----GI~v~MiTGD~~~TA~aIa~~~Gi~ 587 (917)
T COG0474 546 DPPREDVKEAIEELREA----GIKVWMITGDHVETAIAIAKECGIE 587 (917)
T ss_pred CCCCccHHHHHHHHHHC----CCcEEEECCCCHHHHHHHHHHcCCC
Confidence 55778999999999997 9999999999999999999999984
No 262
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=94.66 E-value=0.094 Score=56.40 Aligned_cols=56 Identities=13% Similarity=0.089 Sum_probs=45.1
Q ss_pred cceEEEEEecCCCC-----------------------------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHH--
Q 001541 773 RKHIFVISVDCDST-----------------------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISE-- 821 (1057)
Q Consensus 773 ~kkLi~~DiDGTL~-----------------------------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~-- 821 (1057)
.+-+++||||-|+. ....+.++++++.++++ |+.|+++|||+...
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~----G~~Vf~lTGR~e~~r~ 151 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIEL----GIKIFLLSGRWEELRN 151 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHC----CCEEEEEcCCChHHHH
Confidence 45689999999971 22335778899999886 99999999999766
Q ss_pred -HHHHHHhCCCC
Q 001541 822 -IHSFLVSGHLS 832 (1057)
Q Consensus 822 -i~~~l~~lgl~ 832 (1057)
+.+.|...|++
T Consensus 152 ~T~~nL~~~G~~ 163 (229)
T TIGR01675 152 ATLDNLINAGFT 163 (229)
T ss_pred HHHHHHHHcCCC
Confidence 77889999983
No 263
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=94.64 E-value=0.069 Score=55.21 Aligned_cols=53 Identities=8% Similarity=0.086 Sum_probs=44.9
Q ss_pred eEEEEEecCCC-C----------------------------CcchHHHHHHHHHHHhhhcCCCeEEEEECCC-CHHHHHH
Q 001541 775 HIFVISVDCDS-T----------------------------TGLLDATKKICEAVEKERTEGSIGFILSTSM-TISEIHS 824 (1057)
Q Consensus 775 kLi~~DiDGTL-~----------------------------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR-~~~~i~~ 824 (1057)
||+|||+|+|+ + ..+-+.+.++|+.|+++ |+.++|+|+. +...+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~----G~~l~I~Sn~~~~~~~~~ 78 (174)
T TIGR01685 3 RVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDA----GTYLATASWNDVPEWAYE 78 (174)
T ss_pred cEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHC----CCEEEEEeCCCChHHHHH
Confidence 69999999999 1 12446789999999986 8999999988 8888889
Q ss_pred HHHhCCC
Q 001541 825 FLVSGHL 831 (1057)
Q Consensus 825 ~l~~lgl 831 (1057)
+++.+++
T Consensus 79 ~L~~~~l 85 (174)
T TIGR01685 79 ILGTFEI 85 (174)
T ss_pred HHHhCCc
Confidence 9999887
No 264
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=94.61 E-value=1.2 Score=51.36 Aligned_cols=79 Identities=14% Similarity=0.054 Sum_probs=50.2
Q ss_pred CCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhc
Q 001541 487 KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAK 566 (1057)
Q Consensus 487 ~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~ 566 (1057)
.+.++.+++|+.++.+. . +.+++-..+. .+.+.....+. ..+.+.+ +..++|+.|
T Consensus 182 ~~llP~~~~aa~~L~~~--~--~~~~i~~a~~-----------~~~i~~~~~~~---~~~~~~~-----~~~~~m~~a-- 236 (347)
T PRK14089 182 KRLMPIFKELAKKLEGK--E--KILVVPSFFK-----------GKDLKEIYGDI---SEFEISY-----DTHKALLEA-- 236 (347)
T ss_pred HHHHHHHHHHHHHHhhc--C--cEEEEeCCCc-----------HHHHHHHHhcC---CCcEEec-----cHHHHHHhh--
Confidence 35667788999888642 2 3343333222 12333333322 2333332 567899999
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHHcCCcEEEc
Q 001541 567 TKGVFINPAFIEPFGLTLIEAAAHGLPIVAT 597 (1057)
Q Consensus 567 ~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat 597 (1057)
|++|..| |.+.+|++.+|+|+|..
T Consensus 237 --Dlal~~S-----GT~TLE~al~g~P~Vv~ 260 (347)
T PRK14089 237 --EFAFICS-----GTATLEAALIGTPFVLA 260 (347)
T ss_pred --hHHHhcC-----cHHHHHHHHhCCCEEEE
Confidence 9999887 88888999999998874
No 265
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=94.59 E-value=0.14 Score=62.87 Aligned_cols=53 Identities=8% Similarity=-0.019 Sum_probs=46.1
Q ss_pred eEEEEEecCCC------CCcchHHHHHHHHHHHhhhcCCCe-EEEEECCCCHHHHHHHHHhCCC
Q 001541 775 HIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSI-GFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 775 kLi~~DiDGTL------~~~i~~~t~~al~~l~~~~~~~gi-~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
..+++..|+++ ...+-+..+++|+.|++. |+ .++++||.+...+..+++++|+
T Consensus 343 ~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~----Gi~~v~vvTgd~~~~a~~i~~~lgi 402 (536)
T TIGR01512 343 TIVHVARDGTYLGYILLSDEPRPDAAEAIAELKAL----GIEKVVMLTGDRRAVAERVARELGI 402 (536)
T ss_pred eEEEEEECCEEEEEEEEeccchHHHHHHHHHHHHc----CCCcEEEEcCCCHHHHHHHHHHcCC
Confidence 45677778877 256778999999999987 89 9999999999999999999987
No 266
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=94.49 E-value=0.075 Score=54.32 Aligned_cols=60 Identities=15% Similarity=0.190 Sum_probs=45.2
Q ss_pred ceEEEEEecCCCCCc--------------chHHHHHHHHHHHhhhcCCCeEEEEECCC---------------CHHHHHH
Q 001541 774 KHIFVISVDCDSTTG--------------LLDATKKICEAVEKERTEGSIGFILSTSM---------------TISEIHS 824 (1057)
Q Consensus 774 kkLi~~DiDGTL~~~--------------i~~~t~~al~~l~~~~~~~gi~~vIaTGR---------------~~~~i~~ 824 (1057)
+|+++||.||||... +-+.+.++|+.|+++ |+.++|+|-- +...+..
T Consensus 1 ~~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~----g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~ 76 (161)
T TIGR01261 1 QKILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKA----GYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQ 76 (161)
T ss_pred CCEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHC----CCeEEEEeCCccccCCcCCHHHHHHHHHHHHH
Confidence 478999999999532 225688999999986 8888888864 3456778
Q ss_pred HHHhCCCCCCCCCeEE
Q 001541 825 FLVSGHLSPSDFDAFI 840 (1057)
Q Consensus 825 ~l~~lgl~~~~~D~lI 840 (1057)
+++.+|+. ||.++
T Consensus 77 ~l~~~gl~---fd~ii 89 (161)
T TIGR01261 77 IFRSQGII---FDDVL 89 (161)
T ss_pred HHHHCCCc---eeEEE
Confidence 89999983 55443
No 267
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=94.44 E-value=0.074 Score=64.19 Aligned_cols=67 Identities=12% Similarity=0.193 Sum_probs=51.8
Q ss_pred ccCcceEEEEEecCCCCCc---------------chHHHHHHHHHHHhhhcCCCeEEEEECCCCH------------HHH
Q 001541 770 LRRRKHIFVISVDCDSTTG---------------LLDATKKICEAVEKERTEGSIGFILSTSMTI------------SEI 822 (1057)
Q Consensus 770 ~~~~kkLi~~DiDGTL~~~---------------i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~------------~~i 822 (1057)
...+.|+++||+||||... +-+.+.++|+.|+++ |+.++|+|.-+- ..+
T Consensus 164 ~~~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~----Gy~IvIvTNQ~gI~~G~~~~~~~~~ki 239 (526)
T TIGR01663 164 VKGQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEAD----GFKICIFTNQGGIARGKINADDFKAKI 239 (526)
T ss_pred cCccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHC----CCEEEEEECCcccccCcccHHHHHHHH
Confidence 3456799999999999421 246788999999987 899999997544 347
Q ss_pred HHHHHhCCCCCCCCCeEEeCC
Q 001541 823 HSFLVSGHLSPSDFDAFICNS 843 (1057)
Q Consensus 823 ~~~l~~lgl~~~~~D~lI~~n 843 (1057)
..+++.+|++ ++.++|..
T Consensus 240 ~~iL~~lgip---fdviia~~ 257 (526)
T TIGR01663 240 EAIVAKLGVP---FQVFIAIG 257 (526)
T ss_pred HHHHHHcCCc---eEEEEeCC
Confidence 7889999985 67777754
No 268
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=94.42 E-value=0.33 Score=52.15 Aligned_cols=43 Identities=12% Similarity=0.029 Sum_probs=37.3
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeC
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 1004 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMg 1004 (1057)
.+...++.+++++|++++++++ +||+.+ | +++-+.+|..++.-
T Consensus 149 p~~~~~~~~~~~~~~~~~~~~~-igDs~~-D-i~aA~~aG~~~i~v 191 (222)
T PRK10826 149 PHPEVYLNCAAKLGVDPLTCVA-LEDSFN-G-MIAAKAARMRSIVV 191 (222)
T ss_pred CCHHHHHHHHHHcCCCHHHeEE-EcCChh-h-HHHHHHcCCEEEEe
Confidence 4567999999999999999998 899998 9 99999999776553
No 269
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=94.40 E-value=0.067 Score=53.70 Aligned_cols=53 Identities=9% Similarity=0.033 Sum_probs=41.7
Q ss_pred eEEEEEecCCCC--C-----------cchHHHHHHHHHHHhhhcCCCeEEEEECCCC---------------HHHHHHHH
Q 001541 775 HIFVISVDCDST--T-----------GLLDATKKICEAVEKERTEGSIGFILSTSMT---------------ISEIHSFL 826 (1057)
Q Consensus 775 kLi~~DiDGTL~--~-----------~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~---------------~~~i~~~l 826 (1057)
++++||+||||+ . .+-+.+.++|+.|+++ |+.++|+|..+ ...+...+
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~----g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l 76 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAA----GYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELL 76 (147)
T ss_pred CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHC----CCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHH
Confidence 478999999994 1 2356788999999987 89999999865 24567778
Q ss_pred HhCCC
Q 001541 827 VSGHL 831 (1057)
Q Consensus 827 ~~lgl 831 (1057)
+.+++
T Consensus 77 ~~~~l 81 (147)
T TIGR01656 77 RQLGV 81 (147)
T ss_pred HhCCC
Confidence 88887
No 270
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=94.21 E-value=0.54 Score=54.68 Aligned_cols=110 Identities=11% Similarity=0.167 Sum_probs=65.5
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEc--CC-------CCchhhhhcCCc
Q 001541 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT--KN-------GGPVDIHRVLDN 611 (1057)
Q Consensus 541 ~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat--~~-------Gg~~eiv~~~~~ 611 (1057)
...++|.+... ..++.+++..| |++|- -++-+++|++.+++|||-. +. |...++ .....
T Consensus 249 ~~~~~i~~~~~--~~~~~~ll~~a----DiLIT-----DySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~-~~~~p 316 (369)
T PF04464_consen 249 EDNSNIIFVSD--NEDIYDLLAAA----DILIT-----DYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDY-EEDLP 316 (369)
T ss_dssp T-TTTEEE-TT---S-HHHHHHT-----SEEEE-----SS-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-T-TTSSS
T ss_pred ccCCcEEECCC--CCCHHHHHHhc----CEEEE-----echhHHHHHHHhCCCEEEEeccHHHHhhccCCCCch-HhhCC
Confidence 34467777665 35899999999 99772 3677999999999999963 22 333332 23345
Q ss_pred eEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 001541 612 GLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRI 664 (1057)
Q Consensus 612 Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~ 664 (1057)
|.++. +.++|.++|..++.++....+.++...+....|.=...+++..+.+
T Consensus 317 g~~~~--~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Dg~s~eri~~~I 367 (369)
T PF04464_consen 317 GPIVY--NFEELIEAIENIIENPDEYKEKREKFRDKFFKYNDGNSSERIVNYI 367 (369)
T ss_dssp S-EES--SHHHHHHHHTTHHHHHHHTHHHHHHHHHHHSTT--S-HHHHHHHHH
T ss_pred CceeC--CHHHHHHHHHhhhhCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHH
Confidence 66775 8999999999999877665554444444443344445566665554
No 271
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=94.20 E-value=0.059 Score=60.81 Aligned_cols=57 Identities=4% Similarity=-0.085 Sum_probs=48.3
Q ss_pred CcceEEEEEecCCCCC---------------cchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCC
Q 001541 772 RRKHIFVISVDCDSTT---------------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 832 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL~~---------------~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~ 832 (1057)
.+.+++++|+|||+.. .+.+.+.++|+.|+++ |+.++|+|||+.......++.+++.
T Consensus 156 ~~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 156 GLPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAA----GYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred CCCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhC----CCEEEEEeCCChhhHHHHHHHHHHc
Confidence 3457999999999941 3567899999999886 8999999999999999988888773
No 272
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=94.04 E-value=0.4 Score=59.11 Aligned_cols=164 Identities=15% Similarity=0.069 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEeccCCCCCCCccccccchhhcc
Q 001541 791 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIE 870 (1057)
Q Consensus 791 ~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~~~~~~~~~~~~d~~~~~~i~ 870 (1057)
..+-+|+.+.++. ||+++..||+.+..+..+.++.|+ |.. |+++.
T Consensus 593 ~~vP~Av~~CrsA----GIkvimVTgdhpiTAkAiA~~vgI--------i~~-~~et~---------------------- 637 (1019)
T KOG0203|consen 593 AAVPDAVGKCRSA----GIKVIMVTGDHPITAKAIAKSVGI--------ISE-GSETV---------------------- 637 (1019)
T ss_pred ccCchhhhhhhhh----CceEEEEecCccchhhhhhhheee--------ecC-Cchhh----------------------
Confidence 3455788888887 999999999999999999998875 322 22221
Q ss_pred cccchhhHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCCCCccHHHHHHHHHHhcCcEEEEEeeCCee
Q 001541 871 YRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSR 950 (1057)
Q Consensus 871 ~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~ 950 (1057)
+....+......+. .....+........-....-+++.+.+..+ ...-+.++.+...
T Consensus 638 --------e~~a~r~~~~v~~v--------------n~~~a~a~VihG~eL~~~~~~qld~il~nh-~eIVFARTSPqQK 694 (1019)
T KOG0203|consen 638 --------EDIAKRLNIPVEQV--------------NSRDAKAAVIHGSELPDMSSEQLDELLQNH-QEIVFARTSPQQK 694 (1019)
T ss_pred --------hhhHHhcCCccccc--------------CccccceEEEecccccccCHHHHHHHHHhC-CceEEEecCccce
Confidence 11111111100000 000111111111111112234666666543 2344455555434
Q ss_pred EEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCC
Q 001541 951 INVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDS 1030 (1057)
Q Consensus 951 lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~ 1030 (1057)
|=|+- + |++.| ++|+..||+-| | -+-|+.|+.|||||=|. +..-++|++ ++=+|.
T Consensus 695 LiIVe-~----------cQr~G----aiVaVTGDGVN-D-sPALKKADIGVAMGiaG--SDvsKqAAD------mILLDD 749 (1019)
T KOG0203|consen 695 LIIVE-G----------CQRQG----AIVAVTGDGVN-D-SPALKKADIGVAMGIAG--SDVSKQAAD------MILLDD 749 (1019)
T ss_pred EEeEh-h----------hhhcC----cEEEEeCCCcC-C-Chhhcccccceeecccc--chHHHhhcc------eEEecC
Confidence 54442 2 56665 48888999999 9 99999999999999776 555566665 444555
Q ss_pred CCeEEcc
Q 001541 1031 PNIVQTP 1037 (1057)
Q Consensus 1031 ~~~~~vt 1037 (1057)
.-+..||
T Consensus 750 NFASIVt 756 (1019)
T KOG0203|consen 750 NFASIVT 756 (1019)
T ss_pred cchhhee
Confidence 5556664
No 273
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=94.01 E-value=0.31 Score=51.96 Aligned_cols=45 Identities=9% Similarity=0.008 Sum_probs=38.1
Q ss_pred cCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 001541 955 PVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 1002 (1057)
Q Consensus 955 p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVA 1002 (1057)
...-.|...++++++++|++++++++ +||+.+ | +.+-..+|..++
T Consensus 135 ~~~Kp~p~~~~~~~~~~~~~~~~~~~-iGDs~~-D-i~aa~~aG~~~i 179 (214)
T PRK13288 135 EHAKPDPEPVLKALELLGAKPEEALM-VGDNHH-D-ILAGKNAGTKTA 179 (214)
T ss_pred CCCCCCcHHHHHHHHHcCCCHHHEEE-ECCCHH-H-HHHHHHCCCeEE
Confidence 33445788999999999999999998 999988 9 999999997654
No 274
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=93.88 E-value=0.12 Score=53.65 Aligned_cols=41 Identities=5% Similarity=0.026 Sum_probs=33.4
Q ss_pred ceEEEEEecCCCC------------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCC
Q 001541 774 KHIFVISVDCDST------------TGLLDATKKICEAVEKERTEGSIGFILSTSMT 818 (1057)
Q Consensus 774 kkLi~~DiDGTL~------------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~ 818 (1057)
.|+++||.||||. -.+-+.+.++|++|+++ |+.++|+|..+
T Consensus 3 ~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----g~~l~I~Tn~~ 55 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQA----GYRVVVATNQS 55 (181)
T ss_pred ccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHC----CCEEEEEeCCc
Confidence 5899999999992 12345678999999986 89999999875
No 275
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=93.87 E-value=0.13 Score=53.34 Aligned_cols=40 Identities=13% Similarity=0.211 Sum_probs=32.8
Q ss_pred eEEEEEecCCCCC-----------cchHHHHHHHHHHHhhhcCCCeEEEEECCCC
Q 001541 775 HIFVISVDCDSTT-----------GLLDATKKICEAVEKERTEGSIGFILSTSMT 818 (1057)
Q Consensus 775 kLi~~DiDGTL~~-----------~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~ 818 (1057)
|++|+|.||||.. .+-+.+.++|+.|+++ |+.++|+|.-+
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----G~~l~i~TN~~ 52 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKM----GYALVLVTNQS 52 (176)
T ss_pred CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHC----CCEEEEEeCCc
Confidence 7899999999951 1235689999999986 89999999765
No 276
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=93.87 E-value=0.17 Score=63.15 Aligned_cols=149 Identities=13% Similarity=0.107 Sum_probs=105.4
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCCCCcccchhhHHHHHHHHHHHHHc----
Q 001541 471 TNPRKPVILALARPDPKKNITT-LVKAFGECRPLRELA-----NLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY---- 540 (1057)
Q Consensus 471 ~~~~~~~Il~vGRl~~~Kgi~~-Ll~A~~~l~~~~~~~-----~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~---- 540 (1057)
.+|+...++++-|+...|.... ++..+..+......| ..++|.|+...+... ....+...|..+++..
T Consensus 523 ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~--~aK~iIklI~~va~~iN~Dp 600 (794)
T TIGR02093 523 VDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYH--MAKLIIKLINSVAEVVNNDP 600 (794)
T ss_pred cCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcH--HHHHHHHHHHHHHHHhccCh
Confidence 5577888999999999998777 666655544333332 234555444332221 1244566677666442
Q ss_pred CCCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhhc--CCceEE
Q 001541 541 DLYG--QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV--LDNGLL 614 (1057)
Q Consensus 541 ~l~~--~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~--~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~--~~~Gll 614 (1057)
...+ +|.|+....-+--..++.+| ||-.+.|. .|..|..=+=+|.-|.+.|+|..|...|+.++ .+|+++
T Consensus 601 ~v~~~lkVVFlenY~VslAe~iipaa----Dvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fi 676 (794)
T TIGR02093 601 AVGDKLKVVFVPNYNVSLAELIIPAA----DLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFI 676 (794)
T ss_pred hhCCceeEEEeCCCChHHHHHhhhhh----hhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEE
Confidence 2344 78898887666667777778 99999885 68888888889999999999999999999987 789999
Q ss_pred eCCCCHHHHHHH
Q 001541 615 VDPHDQQSVADA 626 (1057)
Q Consensus 615 v~p~d~~~la~a 626 (1057)
|- .+.+++.+.
T Consensus 677 FG-~~~~ev~~~ 687 (794)
T TIGR02093 677 FG-LTVEEVEAL 687 (794)
T ss_pred cC-CCHHHHHHH
Confidence 94 466665543
No 277
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.81 E-value=1.3 Score=48.77 Aligned_cols=143 Identities=20% Similarity=0.246 Sum_probs=85.3
Q ss_pred CCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCC------CCCCCcH
Q 001541 484 PDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPK------HHKQSDV 557 (1057)
Q Consensus 484 l~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g------~v~~~dl 557 (1057)
++...|+..++.++..+..... .+++...-.+..+ ...+..+.++-+|.+.-...+ ++++...
T Consensus 237 pea~~nl~~il~slcal~~~~a--~vvfw~ai~~~lp---------l~~l~~l~e~~gWq~~ad~~~kdnc~l~lsqqsf 305 (412)
T COG4370 237 PEAQTNLAVILGSLCALPAMFA--LVVFWAAIAPELP---------LLLLWTLEERQGWQPLADRFGKDNCSLWLSQQSF 305 (412)
T ss_pred hHHHhhHHHHHHHHhhhHHHHH--HHHHHhccCcCCC---------HHHHHHHHHhcCcchhhhhhccCceEEEEeHHHH
Confidence 5567899999987766643211 1111111111110 344566667777754332122 3456788
Q ss_pred HHHHHHhhcCCcEEEEcCCCCCCCHHH-HHHHHcCCcEEEcCCCCchhh------h-h-cCCceEEeCCCCHHHHHHHHH
Q 001541 558 PEIYRLAAKTKGVFINPAFIEPFGLTL-IEAAAHGLPIVATKNGGPVDI------H-R-VLDNGLLVDPHDQQSVADALL 628 (1057)
Q Consensus 558 ~~ly~~Aa~~~dv~v~ps~~Egfgl~~-lEAmA~G~PVVat~~Gg~~ei------v-~-~~~~Gllv~p~d~~~la~aI~ 628 (1057)
.+++..| |+.+ +|.-|. =.|+..|+|||+...-|+.-. - . -+..=++++| +.+.-+.+..
T Consensus 306 adiLH~a----daal------gmAGTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~-~aq~a~~~~q 374 (412)
T COG4370 306 ADILHAA----DAAL------GMAGTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRP-EAQAAAQAVQ 374 (412)
T ss_pred HHHHHHH----HHHH------HhccchHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCC-chhhHHHHHH
Confidence 9999999 7755 333334 447778999999886554321 0 0 1223356665 3333344445
Q ss_pred HHHhCHHHHHHHHHHHHHHh
Q 001541 629 KLVADKQLWARCRQNGLKNI 648 (1057)
Q Consensus 629 ~ll~d~~~~~~~~~~~~~~v 648 (1057)
++|.|++..+.++.|+++++
T Consensus 375 ~ll~dp~r~~air~nGqrRi 394 (412)
T COG4370 375 ELLGDPQRLTAIRHNGQRRI 394 (412)
T ss_pred HHhcChHHHHHHHhcchhhc
Confidence 59999999999999999998
No 278
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=93.74 E-value=0.072 Score=54.50 Aligned_cols=90 Identities=18% Similarity=0.195 Sum_probs=59.2
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC--------chhhhhcCCceEEe
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG--------PVDIHRVLDNGLLV 615 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg--------~~eiv~~~~~Gllv 615 (1057)
.+|.+.++. +++.++|+.| |++|.- +-+.|+.|++++|+|+|.-...+ ....+.....|+.+
T Consensus 55 ~~v~~~~~~--~~m~~~m~~a----DlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~ 124 (167)
T PF04101_consen 55 PNVKVFGFV--DNMAELMAAA----DLVISH----AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIML 124 (167)
T ss_dssp CCCEEECSS--SSHHHHHHHH----SEEEEC----S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCS
T ss_pred CcEEEEech--hhHHHHHHHc----CEEEeC----CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCcccc
Confidence 578888884 5799999999 987743 34589999999999998866555 12223333344444
Q ss_pred CC--CCHHHHHHHHHHHHhCHHHHHHHHHH
Q 001541 616 DP--HDQQSVADALLKLVADKQLWARCRQN 643 (1057)
Q Consensus 616 ~p--~d~~~la~aI~~ll~d~~~~~~~~~~ 643 (1057)
.. .+++.|.++|.+++.++.....+..+
T Consensus 125 ~~~~~~~~~L~~~i~~l~~~~~~~~~~~~~ 154 (167)
T PF04101_consen 125 DESELNPEELAEAIEELLSDPEKLKEMAKA 154 (167)
T ss_dssp ECCC-SCCCHHHHHHCHCCCHH-SHHHCCC
T ss_pred CcccCCHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 32 23688999999999998865555443
No 279
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=93.73 E-value=0.2 Score=55.42 Aligned_cols=67 Identities=7% Similarity=0.070 Sum_probs=48.9
Q ss_pred cceEEEEEecCCCC-----------------------------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHH---
Q 001541 773 RKHIFVISVDCDST-----------------------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTIS--- 820 (1057)
Q Consensus 773 ~kkLi~~DiDGTL~-----------------------------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~--- 820 (1057)
++..|++|||+|+. ..+-+.+.+.|+.++++ |+.++|+|+|+..
T Consensus 74 kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~----G~~v~iVTnR~~~~~~ 149 (266)
T TIGR01533 74 KKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSK----GVKIFYVSNRSEKEKA 149 (266)
T ss_pred CCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHC----CCeEEEEeCCCcchHH
Confidence 35689999999991 12335678889999886 8999999999843
Q ss_pred HHHHHHHhCCCCCCCCCeEEeCC
Q 001541 821 EIHSFLVSGHLSPSDFDAFICNS 843 (1057)
Q Consensus 821 ~i~~~l~~lgl~~~~~D~lI~~n 843 (1057)
.+...|+.+|++...++.++...
T Consensus 150 ~T~~~Lkk~Gi~~~~~d~lllr~ 172 (266)
T TIGR01533 150 ATLKNLKRFGFPQADEEHLLLKK 172 (266)
T ss_pred HHHHHHHHcCcCCCCcceEEeCC
Confidence 45588899999533345566543
No 280
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=93.59 E-value=0.28 Score=50.38 Aligned_cols=47 Identities=13% Similarity=0.186 Sum_probs=33.8
Q ss_pred CCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCCc
Q 001541 956 VLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGIC 1007 (1057)
Q Consensus 956 ~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~ 1007 (1057)
.+-.|+.+|+.|++ |.+.+.++. +||+.| | ++|..-+..=++-|+.+
T Consensus 156 dsggKa~~i~~lrk--~~~~~~~~m-vGDGat-D-lea~~pa~afi~~~g~~ 202 (227)
T KOG1615|consen 156 DSGGKAEVIALLRK--NYNYKTIVM-VGDGAT-D-LEAMPPADAFIGFGGNV 202 (227)
T ss_pred cCCccHHHHHHHHh--CCChheeEE-ecCCcc-c-cccCCchhhhhccCCce
Confidence 33479999999999 777777777 999999 9 88877644334444333
No 281
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=93.34 E-value=0.17 Score=52.12 Aligned_cols=55 Identities=7% Similarity=0.009 Sum_probs=45.5
Q ss_pred cceEEEEEecCCCC----CcchHHHHHHHHHHHhhhcCCCeEEEEECCCC-HHHHHHHHHhCCC
Q 001541 773 RKHIFVISVDCDST----TGLLDATKKICEAVEKERTEGSIGFILSTSMT-ISEIHSFLVSGHL 831 (1057)
Q Consensus 773 ~kkLi~~DiDGTL~----~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~-~~~i~~~l~~lgl 831 (1057)
.-+++++|+||||+ ..+.+.+.++|+.|++. |+.++|+|+.+ ...+..+++.+++
T Consensus 24 ~v~~vv~D~Dgtl~~~~~~~~~pgv~e~L~~Lk~~----g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 24 GIKGVVLDKDNTLVYPDHNEAYPALRDWIEELKAA----GRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CCCEEEEecCCccccCCCCCcChhHHHHHHHHHHc----CCEEEEEeCCchHHHHHHHHHHcCC
Confidence 45799999999994 25678899999999986 89999999988 5666777777776
No 282
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=93.33 E-value=0.37 Score=58.49 Aligned_cols=139 Identities=14% Similarity=0.187 Sum_probs=78.1
Q ss_pred HHHHhhhCC--CCCcEEEEEeCCCCC---CCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHH
Q 001541 464 SEIMRFFTN--PRKPVILALARPDPK---KNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLID 538 (1057)
Q Consensus 464 ~~~~~~~~~--~~~~~Il~vGRl~~~---Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~ 538 (1057)
.++..+... ++..++++.|..... +-+..+++||+.+. . .+...+.+ .....
T Consensus 264 ~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~~----~-~~iW~~~~-~~~~~----------------- 320 (500)
T PF00201_consen 264 EELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEAFENLP----Q-RFIWKYEG-EPPEN----------------- 320 (500)
T ss_dssp HHHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHHHHCST----T-EEEEEETC-SHGCH-----------------
T ss_pred cccchhhhccCCCCEEEEecCcccchhHHHHHHHHHHHHhhCC----C-cccccccc-ccccc-----------------
Confidence 455566554 334567888887521 11445666666653 1 23223333 21111
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhhhcCCceEE
Q 001541 539 KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRVLDNGLL 614 (1057)
Q Consensus 539 ~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv~~~~~Gll 614 (1057)
+..++...+++||. ++++... .++|| + -|--.++.||+.+|+|+|+-..-| ....+...+.|+.
T Consensus 321 ---l~~n~~~~~W~PQ~---~lL~hp~--v~~fi-t---HgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~ 388 (500)
T PF00201_consen 321 ---LPKNVLIVKWLPQN---DLLAHPR--VKLFI-T---HGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVV 388 (500)
T ss_dssp ---HHTTEEEESS--HH---HHHTSTT--EEEEE-E---S--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEE
T ss_pred ---ccceEEEeccccch---hhhhccc--ceeee-e---ccccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEE
Confidence 12478888999886 4455441 13444 2 244568999999999999987533 2334455567888
Q ss_pred eCCC--CHHHHHHHHHHHHhCHHHH
Q 001541 615 VDPH--DQQSVADALLKLVADKQLW 637 (1057)
Q Consensus 615 v~p~--d~~~la~aI~~ll~d~~~~ 637 (1057)
++.. +.+++.+||.++++|+.-+
T Consensus 389 l~~~~~~~~~l~~ai~~vl~~~~y~ 413 (500)
T PF00201_consen 389 LDKNDLTEEELRAAIREVLENPSYK 413 (500)
T ss_dssp EGGGC-SHHHHHHHHHHHHHSHHHH
T ss_pred EEecCCcHHHHHHHHHHHHhhhHHH
Confidence 7654 4689999999999998543
No 283
>PLN02207 UDP-glycosyltransferase
Probab=93.33 E-value=24 Score=42.60 Aligned_cols=142 Identities=13% Similarity=0.183 Sum_probs=78.4
Q ss_pred HHHhhhCC--CCCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCC--CcccchhhHHHHHHHHHHHH
Q 001541 465 EIMRFFTN--PRKPVILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDG--IDEMSSTSASVLLSVLKLID 538 (1057)
Q Consensus 465 ~~~~~~~~--~~~~~Il~vGRl~--~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~--~~~~~~~~~~~~~~l~~l~~ 538 (1057)
+..+++.. ++..+.++.|... ..+-+..++.+++.+. . .+..++.+... .+.+. + ...+
T Consensus 264 ~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~----~-~flW~~r~~~~~~~~~lp-------~---~f~e 328 (468)
T PLN02207 264 ELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQ----Y-RFLWSLRTEEVTNDDLLP-------E---GFLD 328 (468)
T ss_pred HHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCC----C-cEEEEEeCCCccccccCC-------H---HHHh
Confidence 34444432 2456778888654 2345667777777663 2 44445553211 00010 1 1111
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chh-hhhcCCceE
Q 001541 539 KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVD-IHRVLDNGL 613 (1057)
Q Consensus 539 ~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~e-iv~~~~~Gl 613 (1057)
+. .+++...++.||.++ ++..+ .+.||-- -| -++++||+.+|+|+|+-...+ ... +++..+.|+
T Consensus 329 r~--~~~g~i~~W~PQ~~I---L~H~~--vg~FvTH---~G-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv 397 (468)
T PLN02207 329 RV--SGRGMICGWSPQVEI---LAHKA--VGGFVSH---CG-WNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAV 397 (468)
T ss_pred hc--CCCeEEEEeCCHHHH---hcccc--cceeeec---Cc-cccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceE
Confidence 22 245556689888854 44431 0345521 23 347799999999999977544 222 233345566
Q ss_pred EeC---------CCCHHHHHHHHHHHHh
Q 001541 614 LVD---------PHDQQSVADALLKLVA 632 (1057)
Q Consensus 614 lv~---------p~d~~~la~aI~~ll~ 632 (1057)
-+. .-+.++++++|.+++.
T Consensus 398 ~~~~~~~~~~~~~v~~e~i~~av~~vm~ 425 (468)
T PLN02207 398 ELKLDYRVHSDEIVNANEIETAIRCVMN 425 (468)
T ss_pred EEecccccccCCcccHHHHHHHHHHHHh
Confidence 431 1267899999999996
No 284
>PRK08238 hypothetical protein; Validated
Probab=93.25 E-value=0.23 Score=59.68 Aligned_cols=48 Identities=15% Similarity=0.177 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcE
Q 001541 791 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSD 846 (1057)
Q Consensus 791 ~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~ 846 (1057)
+...+.+++++++ |+.++|+|+.+...++.+++.+|+ ||.+||+++..
T Consensus 75 pga~e~L~~lk~~----G~~v~LaTas~~~~a~~i~~~lGl----Fd~Vigsd~~~ 122 (479)
T PRK08238 75 EEVLDYLRAERAA----GRKLVLATASDERLAQAVAAHLGL----FDGVFASDGTT 122 (479)
T ss_pred hhHHHHHHHHHHC----CCEEEEEeCCCHHHHHHHHHHcCC----CCEEEeCCCcc
Confidence 6778888888876 999999999999999999999997 68899987653
No 285
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=92.55 E-value=0.8 Score=53.18 Aligned_cols=41 Identities=10% Similarity=0.088 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEe
Q 001541 960 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 1003 (1057)
Q Consensus 960 Kg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAM 1003 (1057)
+...+.+.++++|++++++++ +||+.. | +..=..+|..++.
T Consensus 274 ~Peifl~A~~~lgl~Peecl~-IGDS~~-D-IeAAk~AGm~~Ig 314 (381)
T PLN02575 274 DPEMFIYAAQLLNFIPERCIV-FGNSNQ-T-VEAAHDARMKCVA 314 (381)
T ss_pred CHHHHHHHHHHcCCCcccEEE-EcCCHH-H-HHHHHHcCCEEEE
Confidence 567889999999999999999 888888 8 9999888866444
No 286
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=92.44 E-value=0.27 Score=56.10 Aligned_cols=55 Identities=9% Similarity=0.084 Sum_probs=47.0
Q ss_pred cceEEEEEecCCCC------C--------cchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHh----CCC
Q 001541 773 RKHIFVISVDCDST------T--------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVS----GHL 831 (1057)
Q Consensus 773 ~kkLi~~DiDGTL~------~--------~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~----lgl 831 (1057)
.+|+|++|+|+||- . .+-+.+.++|+.|+++ |+.++|||.-+...+...++. +++
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~----Gi~lai~S~n~~~~a~~~l~~~~~~~~~ 74 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQ----GFLLALASKNDEDDAKKVFERRKDFILQ 74 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhC----CCEEEEEcCCCHHHHHHHHHhCccccCc
Confidence 36899999999992 1 2336789999999886 999999999999999999998 776
No 287
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=92.41 E-value=0.31 Score=48.94 Aligned_cols=54 Identities=11% Similarity=0.022 Sum_probs=44.5
Q ss_pred cceEEEEEecCCCCC-----------------------------cchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHH
Q 001541 773 RKHIFVISVDCDSTT-----------------------------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIH 823 (1057)
Q Consensus 773 ~kkLi~~DiDGTL~~-----------------------------~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~ 823 (1057)
+|+++++|+|+||.+ .+-+.+.+.|+.|+ + ++.++|+|+-+...+.
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~----~~~l~I~Ts~~~~~~~ 75 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-E----LFELVVFTAGLRMYAD 75 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHH-h----ccEEEEEeCCcHHHHH
Confidence 578999999999921 12356788999997 3 6899999999999999
Q ss_pred HHHHhCCC
Q 001541 824 SFLVSGHL 831 (1057)
Q Consensus 824 ~~l~~lgl 831 (1057)
.+++.+++
T Consensus 76 ~il~~l~~ 83 (148)
T smart00577 76 PVLDLLDP 83 (148)
T ss_pred HHHHHhCc
Confidence 99999877
No 288
>PRK06769 hypothetical protein; Validated
Probab=91.87 E-value=0.33 Score=50.15 Aligned_cols=55 Identities=15% Similarity=0.013 Sum_probs=40.7
Q ss_pred cceEEEEEecCCCCC----------cchHHHHHHHHHHHhhhcCCCeEEEEECCCCHH--------HHHHHHHhCCC
Q 001541 773 RKHIFVISVDCDSTT----------GLLDATKKICEAVEKERTEGSIGFILSTSMTIS--------EIHSFLVSGHL 831 (1057)
Q Consensus 773 ~kkLi~~DiDGTL~~----------~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~--------~i~~~l~~lgl 831 (1057)
..|+|++|.||||.. .+-+..++.|+.|++. |+.++|+|+-+.. .+...++.+|+
T Consensus 3 ~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~ 75 (173)
T PRK06769 3 NIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKAN----HIKIFSFTNQPGIADGIATIADFVQELKGFGF 75 (173)
T ss_pred CCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHC----CCEEEEEECCchhcCCcCCHHHHHHHHHhCCc
Confidence 468999999999931 2446889999999986 8999999986531 23344666666
No 289
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=91.73 E-value=0.54 Score=47.45 Aligned_cols=58 Identities=5% Similarity=0.015 Sum_probs=51.8
Q ss_pred cCcceEEEEEecCCC----CCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCC
Q 001541 771 RRRKHIFVISVDCDS----TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 832 (1057)
Q Consensus 771 ~~~kkLi~~DiDGTL----~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~ 832 (1057)
....|-|++|+|.|| ....+++.++-+..++++ |+.++|.|-.+..-+..+.+.++++
T Consensus 25 ~~Gikgvi~DlDNTLv~wd~~~~tpe~~~W~~e~k~~----gi~v~vvSNn~e~RV~~~~~~l~v~ 86 (175)
T COG2179 25 AHGIKGVILDLDNTLVPWDNPDATPELRAWLAELKEA----GIKVVVVSNNKESRVARAAEKLGVP 86 (175)
T ss_pred HcCCcEEEEeccCceecccCCCCCHHHHHHHHHHHhc----CCEEEEEeCCCHHHHHhhhhhcCCc
Confidence 345688999999999 367899999999999997 9999999999999999999999984
No 290
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=91.72 E-value=0.31 Score=56.05 Aligned_cols=55 Identities=11% Similarity=0.109 Sum_probs=43.5
Q ss_pred ceEEEEEecCCCCC--------------cchHHHHHHHHHHHhhhcCCCeEEEEECCC---------------CHHHHHH
Q 001541 774 KHIFVISVDCDSTT--------------GLLDATKKICEAVEKERTEGSIGFILSTSM---------------TISEIHS 824 (1057)
Q Consensus 774 kkLi~~DiDGTL~~--------------~i~~~t~~al~~l~~~~~~~gi~~vIaTGR---------------~~~~i~~ 824 (1057)
+|++|||.||||.. .+-+.+.++|+.|+++ |+.++|+|.- +...+..
T Consensus 2 ~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~----G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~ 77 (354)
T PRK05446 2 QKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKA----GYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQ 77 (354)
T ss_pred CcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHhC----CCeEEEEECCccccCccccHHHHhhHHHHHHH
Confidence 68999999999943 2345688999999876 8999999983 3445777
Q ss_pred HHHhCCCC
Q 001541 825 FLVSGHLS 832 (1057)
Q Consensus 825 ~l~~lgl~ 832 (1057)
+++.+++.
T Consensus 78 iL~~~gl~ 85 (354)
T PRK05446 78 IFESQGIK 85 (354)
T ss_pred HHHHcCCc
Confidence 88888883
No 291
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=91.70 E-value=0.35 Score=51.92 Aligned_cols=37 Identities=16% Similarity=0.166 Sum_probs=29.3
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 1002 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVA 1002 (1057)
.|..+++ +++.+.+++++ +||+.+ | +.|.+.||..+|
T Consensus 148 ~K~~~l~----~~~~~~~~~i~-iGDs~~-D-i~aa~~Ag~~~a 184 (219)
T PRK09552 148 CKPSLIR----KLSDTNDFHIV-IGDSIT-D-LEAAKQADKVFA 184 (219)
T ss_pred chHHHHH----HhccCCCCEEE-EeCCHH-H-HHHHHHCCccee
Confidence 4776654 45777788888 899999 9 999999998666
No 292
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=91.40 E-value=31 Score=39.51 Aligned_cols=120 Identities=18% Similarity=0.333 Sum_probs=87.7
Q ss_pred HHHHHHHHcCC--CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcC
Q 001541 532 SVLKLIDKYDL--YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVL 609 (1057)
Q Consensus 532 ~l~~l~~~~~l--~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~ 609 (1057)
.....+..+++ .++..|.|.+ +++.+++.-. |++|.--+--+.+..-+|++--|=|.|-.. .++.
T Consensus 239 ~F~~f~~~ldlvr~gkasfegR~---~~p~fla~~t---D~VvSHqWeN~lNYlY~daLyggYPLVHNS-----~~l~-- 305 (364)
T PF10933_consen 239 TFVNFANSLDLVRDGKASFEGRF---DFPDFLAQHT---DAVVSHQWENPLNYLYYDALYGGYPLVHNS-----PLLK-- 305 (364)
T ss_pred HHHHHHHhhHHhhcCeeEEeeec---ChHHHHHhCC---CEEEeccccchhhHHHHHHHhcCCCcccCc-----chhc--
Confidence 34445555555 4667888874 7788887664 998877788889999999999999998743 2333
Q ss_pred CceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHhhcCCH--HHHHHHHHHHH
Q 001541 610 DNGLLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNIHLFSW--PEHCKTYLSRI 664 (1057)
Q Consensus 610 ~~Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v~~fsw--~~~a~~~l~~~ 664 (1057)
+.|+..+..|..+=+++|++++. ....+...++.+++.+..++. +..+..|.+.+
T Consensus 306 d~GYYY~~fD~~~G~r~L~~A~~~HD~~~~~Y~~ra~~~l~~~~p~n~~nv~~y~~~L 363 (364)
T PF10933_consen 306 DVGYYYPDFDAFEGARQLLRAIREHDADLDAYRARARRLLDRLSPENPANVRAYEARL 363 (364)
T ss_pred ccCcCCCCccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhhCCCCHHHHHHHHHhh
Confidence 36999999999999999999987 455678888888888754443 34455555443
No 293
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=90.98 E-value=1.4 Score=45.56 Aligned_cols=41 Identities=7% Similarity=0.019 Sum_probs=34.6
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 1002 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVA 1002 (1057)
-+...+++.++++|++++++++ +||+.+ | +..-+.+|..++
T Consensus 142 p~p~~~~~~~~~~~~~~~~~v~-vgD~~~-d-i~aA~~aG~~~i 182 (185)
T TIGR01990 142 PDPEIFLAAAEGLGVSPSECIG-IEDAQA-G-IEAIKAAGMFAV 182 (185)
T ss_pred CChHHHHHHHHHcCCCHHHeEE-EecCHH-H-HHHHHHcCCEEE
Confidence 4678889999999999999999 888888 8 888888886543
No 294
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=90.53 E-value=0.91 Score=49.39 Aligned_cols=36 Identities=11% Similarity=0.086 Sum_probs=27.9
Q ss_pred HHHHHHHHHhhhcCCCeEEEEECCCC----HHHHHHHHHhCCCC
Q 001541 793 TKKICEAVEKERTEGSIGFILSTSMT----ISEIHSFLVSGHLS 832 (1057)
Q Consensus 793 t~~al~~l~~~~~~~gi~~vIaTGR~----~~~i~~~l~~lgl~ 832 (1057)
.++.|+.++++ |+.++++|||+ ...+..+++.+|++
T Consensus 119 a~elL~~L~~~----G~~I~iVTnR~~~k~~~t~~~Llk~~gip 158 (237)
T PRK11009 119 ARQLIDMHVKR----GDSIYFITGRTATKTETVSKTLADDFHIP 158 (237)
T ss_pred HHHHHHHHHHC----CCeEEEEeCCCCcccHHHHHHHHHHcCCC
Confidence 78888888876 89999999996 33555666668883
No 295
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=90.24 E-value=3 Score=46.12 Aligned_cols=40 Identities=15% Similarity=0.162 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 001541 960 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 1002 (1057)
Q Consensus 960 Kg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVA 1002 (1057)
+...+.+.++++|++++++++ +||+.. | +..=..+|..++
T Consensus 167 ~Pe~~~~a~~~l~~~p~~~l~-IgDs~~-D-i~aA~~aG~~~i 206 (260)
T PLN03243 167 DPEMFMYAAERLGFIPERCIV-FGNSNS-S-VEAAHDGCMKCV 206 (260)
T ss_pred CHHHHHHHHHHhCCChHHeEE-EcCCHH-H-HHHHHHcCCEEE
Confidence 456889999999999999999 899888 8 998888887654
No 296
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=90.05 E-value=1 Score=49.30 Aligned_cols=67 Identities=19% Similarity=0.253 Sum_probs=49.7
Q ss_pred CcceEEEEEecCCC-C----Cc-chHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCC
Q 001541 772 RRKHIFVISVDCDS-T----TG-LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNS 843 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL-~----~~-i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~n 843 (1057)
....+||||+|-|| + .+ ..+.+.+.|..|++. +-+.+.-++|- ...+..-++++++. .-||.+||.+
T Consensus 120 ~~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~~---g~vLvLWSyG~-~eHV~~sl~~~~L~-~~Fd~ii~~G 192 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGDVRIRDPAVYDSLRELKEQ---GCVLVLWSYGN-REHVRHSLKELKLE-GYFDIIICGG 192 (297)
T ss_pred CCCcEEEEECCCcccccCCccccCChHHHHHHHHHHHc---CCEEEEecCCC-HHHHHHHHHHhCCc-cccEEEEeCC
Confidence 45679999999999 2 12 347888999999997 33555556664 56677888888886 4688899843
No 297
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=89.57 E-value=1.8 Score=46.14 Aligned_cols=42 Identities=19% Similarity=0.181 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCC-CCCccccccCcceE-EEeC
Q 001541 960 RSQALRYLYLRWGVELSKMVVFVGESG-DTDYEGLLGGVHKT-VILK 1004 (1057)
Q Consensus 960 Kg~AL~~L~~~lgI~~e~viaf~GD~~-n~D~~eML~~ag~g-VAMg 1004 (1057)
+....+.+++++|++++++++ +||+. + | +..=+.+|.. |.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~-igDs~~~-d-i~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 152 HPKIFYAALKRLGVKPEEAVM-VGDRLDK-D-IKGAKNLGMKTVWIN 195 (221)
T ss_pred CHHHHHHHHHHcCCChhhEEE-ECCChHH-H-HHHHHHCCCEEEEEC
Confidence 456899999999999999988 88886 6 7 8888888865 4443
No 298
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=89.11 E-value=0.28 Score=50.06 Aligned_cols=54 Identities=11% Similarity=0.094 Sum_probs=37.1
Q ss_pred eEEEEEecCCCC---------------CcchHHHHHHHHHHHhhhcCCCeEEEEEC-----CC--CH-------HHHHHH
Q 001541 775 HIFVISVDCDST---------------TGLLDATKKICEAVEKERTEGSIGFILST-----SM--TI-------SEIHSF 825 (1057)
Q Consensus 775 kLi~~DiDGTL~---------------~~i~~~t~~al~~l~~~~~~~gi~~vIaT-----GR--~~-------~~i~~~ 825 (1057)
|+.+||+||||. .-+.+.+.++|+++.++ |..+||.| |+ .. .-+..+
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~----Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~i 76 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKK----GYKIVIVTNQSGIGRGMGEKDLENFHEKIENI 76 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHT----TEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhc----CCeEEEEeCccccccccccchHHHHHHHHHHH
Confidence 689999999991 11344688999999886 89999987 55 11 234556
Q ss_pred HHhCCCC
Q 001541 826 LVSGHLS 832 (1057)
Q Consensus 826 l~~lgl~ 832 (1057)
++.++++
T Consensus 77 l~~l~ip 83 (159)
T PF08645_consen 77 LKELGIP 83 (159)
T ss_dssp HHHCTS-
T ss_pred HHHcCCc
Confidence 7778873
No 299
>PLN03190 aminophospholipid translocase; Provisional
Probab=88.82 E-value=2.8 Score=55.93 Aligned_cols=41 Identities=17% Similarity=0.082 Sum_probs=37.9
Q ss_pred CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 787 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 787 ~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
..+.+.+.++|+.++++ |+.+.+.||-....+..+..+.++
T Consensus 725 D~lr~~v~~~I~~l~~a----gi~v~mlTGD~~~tAi~IA~s~~L 765 (1178)
T PLN03190 725 DKLQQGVPEAIESLRTA----GIKVWVLTGDKQETAISIGYSSKL 765 (1178)
T ss_pred cCCchhHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHhCC
Confidence 56788999999999997 999999999999999999999998
No 300
>PRK11587 putative phosphatase; Provisional
Probab=88.66 E-value=4.5 Score=43.20 Aligned_cols=45 Identities=11% Similarity=-0.062 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcce-EEEeCCCc
Q 001541 960 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHK-TVILKGIC 1007 (1057)
Q Consensus 960 Kg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~-gVAMgNa~ 1007 (1057)
+...+...++++|++++++++ +||+.. | +..=..+|. .|++.+..
T Consensus 140 ~p~~~~~~~~~~g~~p~~~l~-igDs~~-d-i~aA~~aG~~~i~v~~~~ 185 (218)
T PRK11587 140 EPDAYLLGAQLLGLAPQECVV-VEDAPA-G-VLSGLAAGCHVIAVNAPA 185 (218)
T ss_pred CcHHHHHHHHHcCCCcccEEE-Eecchh-h-hHHHHHCCCEEEEECCCC
Confidence 456778889999999999998 888888 8 888888886 46665443
No 301
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=88.55 E-value=2 Score=53.28 Aligned_cols=55 Identities=7% Similarity=-0.035 Sum_probs=45.1
Q ss_pred CcceEEEEEecCCCCCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 772 RRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
....|.|+-+=|-+. .+-++++++++.+++. ||.|...||=+...+..+.+++|+
T Consensus 569 ~E~~LtFvGlVGi~D-PPR~ev~~ai~~c~~a----GIrV~mITGD~~~TA~AI~r~iGi 623 (972)
T KOG0202|consen 569 AESDLTFVGLVGILD-PPRPEVADAIELCRQA----GIRVIMITGDNKETAEAIAREIGI 623 (972)
T ss_pred cccceEEEEEeeccC-CCchhHHHHHHHHHHc----CCEEEEEcCCCHHHHHHHHHHhCC
Confidence 344677766666553 3456899999999986 999999999999999999999997
No 302
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=88.52 E-value=2.2 Score=56.86 Aligned_cols=41 Identities=15% Similarity=0.109 Sum_probs=37.6
Q ss_pred CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 787 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 787 ~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
..+.+.+.++|+.|++. ||++.+.||=....+..+..+.|+
T Consensus 630 D~lq~~v~etI~~L~~A----GIkv~mlTGD~~~TA~~IA~~~~i 670 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQA----GIKIWVLTGDKVETAINIGYSCRL 670 (1057)
T ss_pred hhhhhccHHHHHHHHHC----CCeEEEEcCCcHHHHHHHHHHhCC
Confidence 45677889999999997 999999999999999999999998
No 303
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=88.11 E-value=0.84 Score=52.15 Aligned_cols=58 Identities=7% Similarity=0.029 Sum_probs=41.1
Q ss_pred EEEEEecCCC--CCcchHHHHHHHHHHHhhhcCCCeEEEEE---CCCCHHHHHHHH-HhCCCCC
Q 001541 776 IFVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILS---TSMTISEIHSFL-VSGHLSP 833 (1057)
Q Consensus 776 Li~~DiDGTL--~~~i~~~t~~al~~l~~~~~~~gi~~vIa---TGR~~~~i~~~l-~~lgl~~ 833 (1057)
.|+||+|||| ...+.+...++++.++.....-|+.+++. +|++.......+ +.+|++.
T Consensus 2 ~~ifD~DGvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~ 65 (321)
T TIGR01456 2 GFAFDIDGVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDV 65 (321)
T ss_pred EEEEeCcCceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCC
Confidence 5899999999 35667788999999986200015555554 578888866666 8898853
No 304
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=87.93 E-value=0.4 Score=49.79 Aligned_cols=38 Identities=5% Similarity=0.077 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCC
Q 001541 791 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 832 (1057)
Q Consensus 791 ~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~ 832 (1057)
+.+.+.|+.++++ |+.++|+||-+...+..+++.++++
T Consensus 92 ~~~~e~i~~~~~~----~~~v~IvS~~~~~~i~~~~~~~~i~ 129 (192)
T PF12710_consen 92 PDAMELIRELKDN----GIKVVIVSGSPDEIIEPIAERLGID 129 (192)
T ss_dssp TTHHHHHHHHHHT----TSEEEEEEEEEHHHHHHHHHHTTSS
T ss_pred hhHHHHHHHHHHC----CCEEEEECCCcHHHHHHHHHHcCCC
Confidence 3556888888876 8999999999999999999999983
No 305
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=87.37 E-value=51 Score=36.37 Aligned_cols=141 Identities=15% Similarity=0.086 Sum_probs=75.6
Q ss_pred EEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHH-----------HHHcCC--CCC
Q 001541 479 LALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKL-----------IDKYDL--YGQ 545 (1057)
Q Consensus 479 l~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l-----------~~~~~l--~~~ 545 (1057)
+|+||..-.||...+++.-+...+ .+++.-++-+-+.... .-.+... +++..+ .+.
T Consensus 187 ~yigR~Tt~kG~~~mfD~h~~~lK---~~~~~t~~~GierS~A--------~~~i~d~~~~~~y~~~~~~~~~~~~pN~~ 255 (355)
T PF11440_consen 187 RYIGRQTTWKGPRRMFDLHEKILK---PAGFKTIMEGIERSPA--------KISIKDHGIPYEYYPKLDCDEPKPAPNSP 255 (355)
T ss_dssp EEE--SSGGG-HHHHHHHHHHTTT---TTT-EEEEE---SSTH--------HHHHHHTT--EEEE-CTGGGG---SSS--
T ss_pred eeeeeeeeecCcHHHhhhHHHhcC---CcchhHHhhhhhcCCc--------eeeeecCCcccccCccccccCcccCCCCc
Confidence 799999999999999999998753 3677656644332111 1111111 111112 223
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEEcC------CCCCCCHHHHHHHHcCC-cEEEcCCCCchh-------hhhcCCc
Q 001541 546 VAYPKHHKQSDVPEIYRLAAKTKGVFINPA------FIEPFGLTLIEAAAHGL-PIVATKNGGPVD-------IHRVLDN 611 (1057)
Q Consensus 546 V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps------~~Egfgl~~lEAmA~G~-PVVat~~Gg~~e-------iv~~~~~ 611 (1057)
+-.+|..=.+|..+.++.+ ....--+ +.+.+-.+-+|..|||+ ||.-...|...- ++..-..
T Consensus 256 ~~v~~~Yi~~E~~~~Maks----~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~~ 331 (355)
T PF11440_consen 256 VPVYGPYIRSEGLERMAKS----LFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPYS 331 (355)
T ss_dssp EEEESS--HHHHHHHHHTE----EEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--S
T ss_pred ceecchhhhHHHHHHHhhc----cceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccCcc
Confidence 5556666678888888887 4433222 24568889999999997 565554443222 2233345
Q ss_pred eEEeCCCCHHHHHHHHHHHHhCH
Q 001541 612 GLLVDPHDQQSVADALLKLVADK 634 (1057)
Q Consensus 612 Gllv~p~d~~~la~aI~~ll~d~ 634 (1057)
.+.++.+|.++-.+.|.++-++.
T Consensus 332 ~I~~De~dle~T~ekl~E~a~~~ 354 (355)
T PF11440_consen 332 AIYFDENDLESTVEKLIEVANNR 354 (355)
T ss_dssp -EEE-TTSHHHHHHHHHHHHT-H
T ss_pred eeEeccchHHHHHHHHHHHhccC
Confidence 68899999999888888776553
No 306
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=87.08 E-value=6.5 Score=43.06 Aligned_cols=41 Identities=10% Similarity=-0.085 Sum_probs=34.5
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 1002 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVA 1002 (1057)
-+...+.+.++++|++++++++ +||+.. | +..=+.+|.-++
T Consensus 165 P~p~~~~~a~~~~~~~~~~~l~-vgDs~~-D-i~aA~~aGi~~i 205 (248)
T PLN02770 165 PHPDPYLKALEVLKVSKDHTFV-FEDSVS-G-IKAGVAAGMPVV 205 (248)
T ss_pred CChHHHHHHHHHhCCChhHEEE-EcCCHH-H-HHHHHHCCCEEE
Confidence 3457789999999999999998 999888 8 888888887654
No 307
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=86.82 E-value=0.86 Score=49.11 Aligned_cols=35 Identities=14% Similarity=0.150 Sum_probs=24.2
Q ss_pred HHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 793 TKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 793 t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
+.+.|..|+++ |+.++++|+.+...+...++.+|+
T Consensus 91 v~~~l~~L~~~----~i~~avaS~s~~~~~~~~L~~~gl 125 (221)
T COG0637 91 VVELLEQLKAR----GIPLAVASSSPRRAAERVLARLGL 125 (221)
T ss_pred HHHHHHHHHhc----CCcEEEecCChHHHHHHHHHHccC
Confidence 34555666664 577777777777777777777776
No 308
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=86.68 E-value=0.95 Score=46.52 Aligned_cols=54 Identities=11% Similarity=0.177 Sum_probs=36.6
Q ss_pred ceEEEEEecCCC------CC----------------------cchHHHHHHHHHHHhhhcCCCeEEEEECCC-CHHHHHH
Q 001541 774 KHIFVISVDCDS------TT----------------------GLLDATKKICEAVEKERTEGSIGFILSTSM-TISEIHS 824 (1057)
Q Consensus 774 kkLi~~DiDGTL------~~----------------------~i~~~t~~al~~l~~~~~~~gi~~vIaTGR-~~~~i~~ 824 (1057)
.||||||+|+|| ++ .+-+.+..+|+.|++. |+.+++||=- .+.-+++
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~----gv~lavASRt~~P~~A~~ 78 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKER----GVKLAVASRTDEPDWARE 78 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHC----T--EEEEE--S-HHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHC----CCEEEEEECCCChHHHHH
Confidence 369999999999 11 1235678999999986 9999999853 4567899
Q ss_pred HHHhCCC
Q 001541 825 FLVSGHL 831 (1057)
Q Consensus 825 ~l~~lgl 831 (1057)
.|+.+++
T Consensus 79 ~L~~l~i 85 (169)
T PF12689_consen 79 LLKLLEI 85 (169)
T ss_dssp HHHHTT-
T ss_pred HHHhcCC
Confidence 9999988
No 309
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=86.59 E-value=71 Score=37.23 Aligned_cols=85 Identities=16% Similarity=0.248 Sum_probs=51.6
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCC-CchhhhhcC-Cce--EEeCCCC
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG-GPVDIHRVL-DNG--LLVDPHD 619 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~G-g~~eiv~~~-~~G--llv~p~d 619 (1057)
.++.+..--..+++-..++.+ |++|-.-+ =.++=|++.|+|+|+-..- -...+.++. -.+ +-+.|.|
T Consensus 266 ~~i~~~~d~~~~~~~~~l~~~----dl~Vg~R~-----HsaI~al~~g~p~i~i~Y~~K~~~l~~~~gl~~~~~~i~~~~ 336 (385)
T COG2327 266 AEILVSSDEYAEELGGILAAC----DLIVGMRL-----HSAIMALAFGVPAIAIAYDPKVRGLMQDLGLPGFAIDIDPLD 336 (385)
T ss_pred cceEeecchHHHHHHHHhccC----ceEEeehh-----HHHHHHHhcCCCeEEEeecHHHHHHHHHcCCCcccccCCCCc
Confidence 455554332235667788888 88774432 1467799999999996532 222333221 122 3456778
Q ss_pred HHHHHHHHHHHHh-CHHHH
Q 001541 620 QQSVADALLKLVA-DKQLW 637 (1057)
Q Consensus 620 ~~~la~aI~~ll~-d~~~~ 637 (1057)
.+.+..+..+.+. .++.+
T Consensus 337 ~~~l~~~~~e~~~~~~~~~ 355 (385)
T COG2327 337 AEILSAVVLERLTKLDELR 355 (385)
T ss_pred hHHHHHHHHHHHhccHHHH
Confidence 8899988888887 44433
No 310
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=86.44 E-value=1.6 Score=46.12 Aligned_cols=39 Identities=21% Similarity=0.395 Sum_probs=28.1
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeC
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 1004 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMg 1004 (1057)
.|..+++.+ +...+++++ +||+.+ | +.|.+.+|.||+.+
T Consensus 132 ~k~~~l~~~----~~~~~~~v~-iGDs~~-D-~~~~~aa~~~v~~~ 170 (205)
T PRK13582 132 GKRQAVKAL----KSLGYRVIA-AGDSYN-D-TTMLGEADAGILFR 170 (205)
T ss_pred hHHHHHHHH----HHhCCeEEE-EeCCHH-H-HHHHHhCCCCEEEC
Confidence 355555443 333466777 899988 9 99999999998865
No 311
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=86.05 E-value=3 Score=45.66 Aligned_cols=44 Identities=18% Similarity=-0.067 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHhCCC-cccEEEEecCCCCCCccccccCcceE-EEeCCC
Q 001541 960 RSQALRYLYLRWGVE-LSKMVVFVGESGDTDYEGLLGGVHKT-VILKGI 1006 (1057)
Q Consensus 960 Kg~AL~~L~~~lgI~-~e~viaf~GD~~n~D~~eML~~ag~g-VAMgNa 1006 (1057)
+-..+.+.++++|+. ++++++ +||+.+ | +.+=..+|.. |++..+
T Consensus 158 ~p~~~~~a~~~l~~~~~~~~l~-IGDs~~-D-i~aA~~aGi~~i~v~~g 203 (253)
T TIGR01422 158 APWMALKNAIELGVYDVAACVK-VGDTVP-D-IEEGRNAGMWTVGLILS 203 (253)
T ss_pred CHHHHHHHHHHcCCCCchheEE-ECCcHH-H-HHHHHHCCCeEEEEecC
Confidence 456788899999995 899988 899988 8 8888888854 444433
No 312
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=85.86 E-value=2.3 Score=46.84 Aligned_cols=55 Identities=15% Similarity=0.111 Sum_probs=40.9
Q ss_pred ceEEEEEecCCCC-------------C-----------------cchHHHHHHHHHHHhhhcCCCeEEEEECCCCH---H
Q 001541 774 KHIFVISVDCDST-------------T-----------------GLLDATKKICEAVEKERTEGSIGFILSTSMTI---S 820 (1057)
Q Consensus 774 kkLi~~DiDGTL~-------------~-----------------~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~---~ 820 (1057)
+-+++||||+|+. . ..-+.+.+..+.+++. |+.+++.|||+- .
T Consensus 101 ~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~----G~kIf~VSgR~e~~r~ 176 (275)
T TIGR01680 101 KDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSL----GFKIIFLSGRLKDKQA 176 (275)
T ss_pred CCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHC----CCEEEEEeCCchhHHH
Confidence 4699999999982 0 0124566777888876 899999999984 3
Q ss_pred HHHHHHHhCCCC
Q 001541 821 EIHSFLVSGHLS 832 (1057)
Q Consensus 821 ~i~~~l~~lgl~ 832 (1057)
.....|...|++
T Consensus 177 aT~~NL~kaGy~ 188 (275)
T TIGR01680 177 VTEANLKKAGYH 188 (275)
T ss_pred HHHHHHHHcCCC
Confidence 456778888884
No 313
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=85.81 E-value=41 Score=37.66 Aligned_cols=119 Identities=18% Similarity=0.183 Sum_probs=76.3
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCcc-CCcccccCCCCCCccccccCCCCCeEEEEccCCCccccc
Q 001541 190 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSY-GEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYI 268 (1057)
Q Consensus 190 ~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y-~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l 268 (1057)
.-|=.+.+-.|.+.|.++| |+|-|++-.+++|....+- |..+.| ++....+|+.|..+|....
T Consensus 61 GaGKSTli~~L~~~l~~~G--~rVaVlAVDPSSp~TGGsiLGDRiRM----------~~~~~~~~vFiRs~~srG~---- 124 (323)
T COG1703 61 GAGKSTLIEALGRELRERG--HRVAVLAVDPSSPFTGGSILGDRIRM----------QRLAVDPGVFIRSSPSRGT---- 124 (323)
T ss_pred CCchHHHHHHHHHHHHHCC--cEEEEEEECCCCCCCCccccccHhhH----------HhhccCCCeEEeecCCCcc----
Confidence 3477889999999999999 9999999887665432211 222222 3344467888888776433
Q ss_pred ccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhh
Q 001541 269 AKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDK 343 (1057)
Q Consensus 269 ~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~ 343 (1057)
+-......... .+.+.. .-+|+|.....-.|..=.-+.....+-++++....+.+.
T Consensus 125 --------lGGlS~at~~~----i~~ldA-------aG~DvIIVETVGvGQsev~I~~~aDt~~~v~~pg~GD~~ 180 (323)
T COG1703 125 --------LGGLSRATREA----IKLLDA-------AGYDVIIVETVGVGQSEVDIANMADTFLVVMIPGAGDDL 180 (323)
T ss_pred --------chhhhHHHHHH----HHHHHh-------cCCCEEEEEecCCCcchhHHhhhcceEEEEecCCCCcHH
Confidence 11122222111 122222 459999999876666666666667888899999887654
No 314
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=85.40 E-value=1.9 Score=46.02 Aligned_cols=41 Identities=15% Similarity=0.061 Sum_probs=30.9
Q ss_pred CCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeC
Q 001541 957 LASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 1004 (1057)
Q Consensus 957 gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMg 1004 (1057)
|..|..+++.+. ...+++++ +||+.+ | +.|++.|+..+|=+
T Consensus 142 g~~K~~~l~~~~----~~~~~~i~-iGDg~~-D-~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 142 GCCKPSLIRKLS----EPNDYHIV-IGDSVT-D-VEAAKQSDLCFARD 182 (214)
T ss_pred CCCHHHHHHHHh----hcCCcEEE-EeCCHH-H-HHHHHhCCeeEehH
Confidence 346888887664 34566766 899999 9 99999999866643
No 315
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=84.81 E-value=5.6 Score=44.02 Aligned_cols=42 Identities=12% Similarity=-0.163 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhCCC-cccEEEEecCCCCCCccccccCcceE-EEeC
Q 001541 960 RSQALRYLYLRWGVE-LSKMVVFVGESGDTDYEGLLGGVHKT-VILK 1004 (1057)
Q Consensus 960 Kg~AL~~L~~~lgI~-~e~viaf~GD~~n~D~~eML~~ag~g-VAMg 1004 (1057)
+...+...++++|++ ++++++ +||+.+ | +.+=..+|.. |++.
T Consensus 160 ~p~~~~~a~~~l~~~~~~e~l~-IGDs~~-D-i~aA~~aG~~~i~v~ 203 (267)
T PRK13478 160 YPWMALKNAIELGVYDVAACVK-VDDTVP-G-IEEGLNAGMWTVGVI 203 (267)
T ss_pred ChHHHHHHHHHcCCCCCcceEE-EcCcHH-H-HHHHHHCCCEEEEEc
Confidence 356788999999996 688888 899988 8 8888888853 4443
No 316
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=84.63 E-value=2.5 Score=43.40 Aligned_cols=59 Identities=5% Similarity=0.027 Sum_probs=46.2
Q ss_pred cCcceEEEEEecCCCC----CcchHHHHHHHHHHHhhhcCCCe-EEEEECCC-------CHHHHHHHHHhCCCC
Q 001541 771 RRRKHIFVISVDCDST----TGLLDATKKICEAVEKERTEGSI-GFILSTSM-------TISEIHSFLVSGHLS 832 (1057)
Q Consensus 771 ~~~kkLi~~DiDGTL~----~~i~~~t~~al~~l~~~~~~~gi-~~vIaTGR-------~~~~i~~~l~~lgl~ 832 (1057)
....|.|+||.|.||+ ..+++...+.++++++. .+. .++|.|=- ....+..+-+.+|++
T Consensus 38 ~~Gik~li~DkDNTL~~~~~~~i~~~~~~~~~~l~~~---~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp 108 (168)
T PF09419_consen 38 KKGIKALIFDKDNTLTPPYEDEIPPEYAEWLNELKKQ---FGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP 108 (168)
T ss_pred hcCceEEEEcCCCCCCCCCcCcCCHHHHHHHHHHHHH---CCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc
Confidence 3567899999999994 67899999999999987 343 45565544 367788888999984
No 317
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=83.65 E-value=7.1 Score=47.53 Aligned_cols=41 Identities=20% Similarity=0.165 Sum_probs=33.2
Q ss_pred CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 787 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 787 ~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
.++.+..+-.|+.|+.+ ||++=..||--+..+.-+.+.-++
T Consensus 657 DkLQ~dVk~tLElLRNA----gikiWMLTGDKlETA~ciAkSs~L 697 (1051)
T KOG0210|consen 657 DKLQDDVKPTLELLRNA----GIKIWMLTGDKLETAICIAKSSRL 697 (1051)
T ss_pred HHHhhhhHhHHHHHhhc----CcEEEEEcCcchhheeeeehhccc
Confidence 56788889999999987 999999999988887666555544
No 318
>PTZ00445 p36-lilke protein; Provisional
Probab=83.43 E-value=2.1 Score=45.23 Aligned_cols=45 Identities=9% Similarity=0.064 Sum_probs=36.0
Q ss_pred EecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceE
Q 001541 953 VIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKT 1000 (1057)
Q Consensus 953 I~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~g 1000 (1057)
+.|.-..|..=++++++++|+++++++. +||... . ++--+..|.-
T Consensus 156 ~KPdp~iK~yHle~ll~~~gl~peE~LF-IDD~~~-N-VeaA~~lGi~ 200 (219)
T PTZ00445 156 DAPMPLDKSYHLKQVCSDFNVNPDEILF-IDDDMN-N-CKNALKEGYI 200 (219)
T ss_pred cCCCccchHHHHHHHHHHcCCCHHHeEe-ecCCHH-H-HHHHHHCCCE
Confidence 3466667888899999999999999977 888776 5 8877777744
No 319
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=83.36 E-value=4.1 Score=46.52 Aligned_cols=198 Identities=13% Similarity=0.127 Sum_probs=99.1
Q ss_pred cceEEEEEecCCC--C----CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHh----------C-CCCCCC
Q 001541 773 RKHIFVISVDCDS--T----TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVS----------G-HLSPSD 835 (1057)
Q Consensus 773 ~kkLi~~DiDGTL--~----~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~----------l-gl~~~~ 835 (1057)
.=+|+-||=|+|| . ..-++.+...|+-|++ |+.|+|+|.=.+.++.++-+. . .++...
T Consensus 146 ~L~LvTFDgDvTLY~DG~sl~~d~pvi~~ii~LL~~-----gv~VgIVTAAGY~~a~kY~~RL~GLL~a~~~~~~Lt~~q 220 (408)
T PF06437_consen 146 GLKLVTFDGDVTLYEDGASLEPDNPVIPRIIKLLRR-----GVKVGIVTAAGYPGAEKYEERLHGLLDAFKDSTDLTPEQ 220 (408)
T ss_pred CceEEEEcCCcccccCCCCCCCCchHHHHHHHHHhc-----CCeEEEEeCCCCCChHHHHHHHHHHHHHHHhccCCCHHH
Confidence 4479999999999 1 2334566666666664 789999998777666554333 2 332100
Q ss_pred C-CeEEeCCCcEEEe---ccCC-CCCCCccccccchhhcccccchhhHHHHHHHhhhcccccccccccccccccccccCc
Q 001541 836 F-DAFICNSGSDLYY---STLN-SEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTN 910 (1057)
Q Consensus 836 ~-D~lI~~nGa~I~~---~~~~-~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (1057)
- ..+|. |++.-| .... .....+.++..|...-...|..+.+..+++..............-+..+-.+ .
T Consensus 221 k~~l~VM--GGEsNYLfr~~~~~~~~L~~v~~~~W~~~~m~~W~~~dI~~lLD~AE~~L~~~~~~l~Lpa~IiRK----~ 294 (408)
T PF06437_consen 221 KSNLYVM--GGESNYLFRYDPESPHGLEFVPREEWLLPEMKTWSEEDITELLDIAEAALRDCVKRLNLPATIIRK----E 294 (408)
T ss_pred hcCEEEe--cccceeEEEecCCCCCCeEEccHHhccCccccCcCHHHHHHHHHHHHHHHHHHHHHcCCCeeEEee----c
Confidence 1 12333 333221 1111 1223455667888777788998888777653322211111000000000000 0
Q ss_pred ceEEEEecCCCCC--ccHHH----HHHHHHHhcCc--EEEEEeeCCe--eEEEecCCCCHHHHHHHHHHHh----CCCcc
Q 001541 911 YCYAFSVQKPGMT--PPVKE----LRKVLRIQALR--CHVIYCQNGS--RINVIPVLASRSQALRYLYLRW----GVELS 976 (1057)
Q Consensus 911 ~k~~~~~~~~~~~--~~~~e----l~~~l~~~~~~--~~v~~s~~~~--~lEI~p~gasKg~AL~~L~~~l----gI~~e 976 (1057)
..+-..-...... ..++| +++.|...... +.+..-.++. ++|| .+|.-|++.|.+++ +|.++
T Consensus 295 RAVGivP~~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDI----GdKs~GV~~lQ~y~~~~~~i~~~ 370 (408)
T PF06437_consen 295 RAVGIVPKPGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDI----GDKSLGVRALQKYFDPEGGIKPS 370 (408)
T ss_pred ceeeEecCCCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEc----CCcHHhHHHHHHHHHhccCCCcc
Confidence 0010110001101 11222 23333332222 2222222221 4555 58999999999999 99999
Q ss_pred cEEEEecCCC
Q 001541 977 KMVVFVGESG 986 (1057)
Q Consensus 977 ~viaf~GD~~ 986 (1057)
+++= +||..
T Consensus 371 ~tLH-VGDQF 379 (408)
T PF06437_consen 371 ETLH-VGDQF 379 (408)
T ss_pred ceee-ehhhh
Confidence 9998 88753
No 320
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=83.35 E-value=6.4 Score=47.33 Aligned_cols=178 Identities=13% Similarity=0.112 Sum_probs=119.8
Q ss_pred hCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCC-CEEe
Q 001541 470 FTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYG-QVAY 548 (1057)
Q Consensus 470 ~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~-~V~f 548 (1057)
..+.+..++..+-.+ .|==+..++.+..+.. .-|+-+|++=.-|.-- ..++++.+..+|+.+ +|.|
T Consensus 754 ~Lp~d~vvf~~FNqL--yKidP~~l~~W~~ILk--~VPnS~LwllrfPa~g---------e~rf~ty~~~~Gl~p~riif 820 (966)
T KOG4626|consen 754 GLPEDAVVFCNFNQL--YKIDPSTLQMWANILK--RVPNSVLWLLRFPAVG---------EQRFRTYAEQLGLEPDRIIF 820 (966)
T ss_pred CCCCCeEEEeechhh--hcCCHHHHHHHHHHHH--hCCcceeEEEeccccc---------hHHHHHHHHHhCCCccceee
Confidence 334444555555554 3333566677766653 3344444332222111 156888899999975 6888
Q ss_pred CCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcC-------CCCchhhhhcCCceEEeCCCCHH
Q 001541 549 PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK-------NGGPVDIHRVLDNGLLVDPHDQQ 621 (1057)
Q Consensus 549 ~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~-------~Gg~~eiv~~~~~Gllv~p~d~~ 621 (1057)
..-...+|=..-++.| ||++-+++.-|- .|-.|.+.+|+|+|.-. +++. ++...+.|-++- .+.+
T Consensus 821 s~va~k~eHvrr~~La----Dv~LDTplcnGh-TTg~dvLw~GvPmVTmpge~lAsrVa~S--ll~~~Gl~hlia-k~~e 892 (966)
T KOG4626|consen 821 SPVAAKEEHVRRGQLA----DVCLDTPLCNGH-TTGMDVLWAGVPMVTMPGETLASRVAAS--LLTALGLGHLIA-KNRE 892 (966)
T ss_pred ccccchHHHHHhhhhh----hhcccCcCcCCc-ccchhhhccCCceeecccHHHHHHHHHH--HHHHcccHHHHh-hhHH
Confidence 8887788888889999 999998876653 45678899999998743 2221 222233444442 4778
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHh-h--cCCHHHHHHHHHHHHHccc
Q 001541 622 SVADALLKLVADKQLWARCRQNGLKNI-H--LFSWPEHCKTYLSRIAGCK 668 (1057)
Q Consensus 622 ~la~aI~~ll~d~~~~~~~~~~~~~~v-~--~fsw~~~a~~~l~~~~~~~ 668 (1057)
+..+.-.++-.|.+..+.++..-++.. . .|+-..++..+.++|.++=
T Consensus 893 EY~~iaV~Latd~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW 942 (966)
T KOG4626|consen 893 EYVQIAVRLATDKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMW 942 (966)
T ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHH
Confidence 888877788889888888888877765 2 7999999999999998653
No 321
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=83.31 E-value=1 Score=44.17 Aligned_cols=118 Identities=20% Similarity=0.122 Sum_probs=60.9
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCC-Cccccc
Q 001541 190 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFG-PKDKYI 268 (1057)
Q Consensus 190 ~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~-p~~~~l 268 (1057)
++|...=...|+++|.++| |+|.+.|..... +.-+..|+.++.++.. +.....
T Consensus 8 t~Ghv~P~lala~~L~~rG--h~V~~~~~~~~~------------------------~~v~~~Gl~~~~~~~~~~~~~~~ 61 (139)
T PF03033_consen 8 TRGHVYPFLALARALRRRG--HEVRLATPPDFR------------------------ERVEAAGLEFVPIPGDSRLPRSL 61 (139)
T ss_dssp SHHHHHHHHHHHHHHHHTT---EEEEEETGGGH------------------------HHHHHTT-EEEESSSCGGGGHHH
T ss_pred ChhHHHHHHHHHHHHhccC--CeEEEeecccce------------------------ecccccCceEEEecCCcCcCccc
Confidence 7899999999999999999 999998774310 1112358888887765 111000
Q ss_pred ccccCCCChhHHHHHHHHHHHHHHHHHHhhhc-----CCCCCcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCC
Q 001541 269 AKELLWPHIPEFVDGALNHIIRMSNVLGEQIG-----GGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSL 339 (1057)
Q Consensus 269 ~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~-----~~~~~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l 339 (1057)
.....+..+... ...+.+..+.+.+... ......+|++.++. ....+..++..+++|.+.+....
T Consensus 62 ---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~vaE~~~iP~~~~~~~p 131 (139)
T PF03033_consen 62 ---EPLANLRRLARL-IRGLEEAMRILARFRPDLVVAAGGYVADDVIIAAP--LAFAAALVAEQLGIPGVANRLFP 131 (139)
T ss_dssp ---HHHHHHHCHHHH-HHHHHHHHHHHHHHHHCCCCHCTTTTECCEECHHH--HHTHHHHHHHHHTS-EEEEESSG
T ss_pred ---chhhhhhhHHHH-hhhhhHHHHHhhccCcchhhhccCcccchHHHhhh--hcCccceeEhhhCchHHHHhhCC
Confidence 000011111111 1122222233333210 11112355554433 34456778888999999887654
No 322
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=83.27 E-value=2.2 Score=44.24 Aligned_cols=64 Identities=8% Similarity=0.106 Sum_probs=43.9
Q ss_pred ceEEEEEecCCCCC------------cchHHHHHHHHHHHhhhcCCCeEEEEECC-----CCHHH----------HHHHH
Q 001541 774 KHIFVISVDCDSTT------------GLLDATKKICEAVEKERTEGSIGFILSTS-----MTISE----------IHSFL 826 (1057)
Q Consensus 774 kkLi~~DiDGTL~~------------~i~~~t~~al~~l~~~~~~~gi~~vIaTG-----R~~~~----------i~~~l 826 (1057)
.++||+|-||||.. .+.+.+..+++++++. |..+|++|= |.+.. +...|
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~~----gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l 80 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQRA----GYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKIL 80 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHhC----CCeEEEEECCCCccccCccHHHHHHHHHHHHHHH
Confidence 57999999999931 2446788999999876 899999884 54332 44566
Q ss_pred HhCCCCCCCCCeEEeCC
Q 001541 827 VSGHLSPSDFDAFICNS 843 (1057)
Q Consensus 827 ~~lgl~~~~~D~lI~~n 843 (1057)
++.|+.. .+.++|-+
T Consensus 81 ~~~gv~i--d~i~~Cph 95 (181)
T COG0241 81 ASQGVKI--DGILYCPH 95 (181)
T ss_pred HHcCCcc--ceEEECCC
Confidence 7777532 23466643
No 323
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=83.09 E-value=11 Score=39.59 Aligned_cols=72 Identities=8% Similarity=0.087 Sum_probs=31.5
Q ss_pred cceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecC
Q 001541 306 WPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITST 385 (1057)
Q Consensus 306 ~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S 385 (1057)
+||++.......-.-....++..|+|+++.-=-+....+ ..|+..+.+ -+.++...|.|++.|
T Consensus 95 ~P~~~i~~EtElWPnll~~a~~~~ip~~LvNarls~~s~---------------~~~~~~~~~--~r~~l~~f~~i~aqs 157 (186)
T PF04413_consen 95 RPDLLIWVETELWPNLLREAKRRGIPVVLVNARLSERSF---------------RRYRRFPFL--FRPLLSRFDRILAQS 157 (186)
T ss_dssp --SEEEEES----HHHHHH-----S-EEEEEE-----------------------------HH--HHHHGGG-SEEEESS
T ss_pred CCCEEEEEccccCHHHHHHHhhcCCCEEEEeeeeccccc---------------hhhhhhHHH--HHHHHHhCCEEEECC
Confidence 499888866543333344556779998764433322111 112222222 345789999999999
Q ss_pred HHHHHHHHh
Q 001541 386 RQEIEEQWR 394 (1057)
Q Consensus 386 ~~~~~~~~~ 394 (1057)
+...+.+..
T Consensus 158 ~~da~r~~~ 166 (186)
T PF04413_consen 158 EADAERFRK 166 (186)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 998887654
No 324
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=82.90 E-value=3.1 Score=50.61 Aligned_cols=54 Identities=11% Similarity=0.122 Sum_probs=46.1
Q ss_pred ceEEEEEecCCC------CCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 774 KHIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 774 kkLi~~DiDGTL------~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
.+.+++.+|+++ ...+.+.+.++++++++. |+.+++.||-+...+..+.+++|+
T Consensus 327 ~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l~~~----gi~~~~ltGD~~~~a~~ia~~lgi 386 (499)
T TIGR01494 327 LRVLAVASKETLLGLLGLEDPLRDDAKETISELREA----GIRVIMLTGDNVLTAKAIAKELGI 386 (499)
T ss_pred CEEEEEEECCeEEEEEEecCCCchhHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCc
Confidence 456777888877 367788999999999986 899999999999999999998874
No 325
>PLN02940 riboflavin kinase
Probab=82.35 E-value=1.8 Score=50.68 Aligned_cols=44 Identities=7% Similarity=0.221 Sum_probs=31.3
Q ss_pred HHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHH-hCCCCCCCCCeEEeCC
Q 001541 795 KICEAVEKERTEGSIGFILSTSMTISEIHSFLV-SGHLSPSDFDAFICNS 843 (1057)
Q Consensus 795 ~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~-~lgl~~~~~D~lI~~n 843 (1057)
+.|+.|+++ |+.++|+|+.+...+...++ ..++. ..||.++|+.
T Consensus 100 elL~~Lk~~----g~~l~IvTn~~~~~~~~~l~~~~gl~-~~Fd~ii~~d 144 (382)
T PLN02940 100 RLIKHLKSH----GVPMALASNSPRANIEAKISCHQGWK-ESFSVIVGGD 144 (382)
T ss_pred HHHHHHHHC----CCcEEEEeCCcHHHHHHHHHhccChH-hhCCEEEehh
Confidence 355666664 88999999998888888776 56763 2367777743
No 326
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=81.92 E-value=3.2 Score=42.52 Aligned_cols=56 Identities=14% Similarity=0.046 Sum_probs=36.2
Q ss_pred cchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCC----CCCCCCCeEEeCCCcEEEecc
Q 001541 788 GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGH----LSPSDFDAFICNSGSDLYYST 851 (1057)
Q Consensus 788 ~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lg----l~~~~~D~lI~~nGa~I~~~~ 851 (1057)
.+.+..++.++.++++ ++.|++.||=+-..+.++++.+. +. ..=|.+|-.+|+..+
T Consensus 73 ~Idp~fKef~e~ike~----di~fiVvSsGm~~fI~~lfe~ivgke~i~----~idi~sn~~~ih~dg 132 (220)
T COG4359 73 KIDPGFKEFVEWIKEH----DIPFIVVSSGMDPFIYPLFEGIVGKERIY----CIDIVSNNDYIHIDG 132 (220)
T ss_pred ccCccHHHHHHHHHHc----CCCEEEEeCCCchHHHHHHHhhcccccee----eeEEeecCceEcCCC
Confidence 3556677778888887 67666666666667788888776 32 123555666665543
No 327
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=80.67 E-value=3.8 Score=43.14 Aligned_cols=58 Identities=9% Similarity=0.116 Sum_probs=45.7
Q ss_pred cccCcceEEEEEecCCCCCc----------chHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 769 ALRRRKHIFVISVDCDSTTG----------LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 769 ~~~~~kkLi~~DiDGTL~~~----------i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
..+..||++|+|+|+||.+. .-+-+.+.|+.+.+ ...++|=|..+..-+...+.++++
T Consensus 16 ~~~~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~-----~feIvVwTAa~~~ya~~~l~~l~~ 83 (195)
T TIGR02245 16 PPREGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYE-----DYDIVIWSATSMKWIEIKMTELGV 83 (195)
T ss_pred CCCCCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHh-----CCEEEEEecCCHHHHHHHHHHhcc
Confidence 33677899999999999421 23567888888886 477888888888888899998876
No 328
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=80.10 E-value=1.1 Score=48.73 Aligned_cols=55 Identities=9% Similarity=0.091 Sum_probs=42.0
Q ss_pred cceEEEEEecCCCC-----------------------------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHH---
Q 001541 773 RKHIFVISVDCDST-----------------------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTIS--- 820 (1057)
Q Consensus 773 ~kkLi~~DiDGTL~-----------------------------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~--- 820 (1057)
.+..|+||||+|+. ....+...+.++.+++. |+.|+++|||+-.
T Consensus 71 ~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~----G~~V~~iT~R~~~~r~ 146 (229)
T PF03767_consen 71 KPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSR----GVKVFFITGRPESQRE 146 (229)
T ss_dssp SEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHT----TEEEEEEEEEETTCHH
T ss_pred CCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHC----CCeEEEEecCCchhHH
Confidence 45689999999981 12223577899999987 9999999999765
Q ss_pred HHHHHHHhCCC
Q 001541 821 EIHSFLVSGHL 831 (1057)
Q Consensus 821 ~i~~~l~~lgl 831 (1057)
.....|...|+
T Consensus 147 ~T~~nL~~~G~ 157 (229)
T PF03767_consen 147 ATEKNLKKAGF 157 (229)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHcCC
Confidence 45567777787
No 329
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=80.01 E-value=0.83 Score=52.28 Aligned_cols=78 Identities=17% Similarity=-0.007 Sum_probs=47.2
Q ss_pred CcCCcccCcceEEEEEecCCCCCcchH----------HHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCC
Q 001541 765 AKFPALRRRKHIFVISVDCDSTTGLLD----------ATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPS 834 (1057)
Q Consensus 765 ~~~~~~~~~kkLi~~DiDGTL~~~i~~----------~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~ 834 (1057)
++.-..+..+++|++|||||+++.--. -|-.-+.+|-.+....|..+..-|.|++..+..-..-+-
T Consensus 366 ~~ifvwr~n~kiVVsDiDGTITkSD~~Ghv~~miGkdwth~gVAkLYtdI~rNGYkI~YltsR~~Gqa~sTrsylr---- 441 (580)
T COG5083 366 MYIFVWRNNKKIVVSDIDGTITKSDALGHVKQMIGKDWTHNGVAKLYTDIDRNGYKIKYLTSRSYGQADSTRSYLR---- 441 (580)
T ss_pred EEEEEEeCCCcEEEEecCCcEEehhhHHHHHHHhccchhhcchhhhhhhhccCceEEEEEecccccchhhhhhHHH----
Confidence 444456778999999999999521111 111222333322222388999999999876543332222
Q ss_pred CCCeEEeCCCcEEEec
Q 001541 835 DFDAFICNSGSDLYYS 850 (1057)
Q Consensus 835 ~~D~lI~~nGa~I~~~ 850 (1057)
.||.||..+...
T Consensus 442 ----nieQngykLpdg 453 (580)
T COG5083 442 ----NIEQNGYKLPDG 453 (580)
T ss_pred ----hhhhcCccCCCC
Confidence 478888877654
No 330
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=79.31 E-value=4 Score=47.84 Aligned_cols=55 Identities=9% Similarity=0.153 Sum_probs=45.7
Q ss_pred cCcceEEEEEecCCCC-------------------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhC
Q 001541 771 RRRKHIFVISVDCDST-------------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSG 829 (1057)
Q Consensus 771 ~~~kkLi~~DiDGTL~-------------------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~l 829 (1057)
...+|.+|+|+|+||= ...-...++.|+.++++ |+.++|||=-+...+++.+...
T Consensus 219 g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~kq----GVlLav~SKN~~~da~evF~kh 292 (574)
T COG3882 219 GKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKKQ----GVLLAVCSKNTEKDAKEVFRKH 292 (574)
T ss_pred CcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHhc----cEEEEEecCCchhhHHHHHhhC
Confidence 5678999999999991 23345788899999997 9999999999999998887654
No 331
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=79.19 E-value=3.6 Score=41.55 Aligned_cols=52 Identities=15% Similarity=0.125 Sum_probs=38.3
Q ss_pred eEEEEEecCCCC----Cc------------------chHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 775 HIFVISVDCDST----TG------------------LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 775 kLi~~DiDGTL~----~~------------------i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
|++|+|+||||. .. +-+.+.+.|+.+.+ ...++|.|..+..-+..+++.+.-
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~-----~~ev~i~T~~~~~ya~~v~~~ldp 74 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK-----HYEVVIWTSASEEYAEPVLDALDP 74 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH-----HCEEEEE-SS-HHHHHHHHHHHTT
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH-----hceEEEEEeehhhhhhHHHHhhhh
Confidence 689999999992 11 34678888998865 478889999999999999988763
No 332
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=79.02 E-value=4.9 Score=37.20 Aligned_cols=82 Identities=17% Similarity=0.227 Sum_probs=56.6
Q ss_pred EEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEe--CCCCCCCc--HHHHHHHhhcCCcEEEEcCCC---CCCCH
Q 001541 510 TLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY--PKHHKQSD--VPEIYRLAAKTKGVFINPAFI---EPFGL 582 (1057)
Q Consensus 510 ~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f--~g~v~~~d--l~~ly~~Aa~~~dv~v~ps~~---Egfgl 582 (1057)
+||+|+.++ ....+...++++|..- +.+ .+...... ++..+..| |++|++.-+ ..+-.
T Consensus 2 vliVGG~~~----------~~~~~~~~~~~~G~~~-~~hg~~~~~~~~~~~l~~~i~~a----D~VIv~t~~vsH~~~~~ 66 (97)
T PF10087_consen 2 VLIVGGRED----------RERRYKRILEKYGGKL-IHHGRDGGDEKKASRLPSKIKKA----DLVIVFTDYVSHNAMWK 66 (97)
T ss_pred EEEEcCCcc----------cHHHHHHHHHHcCCEE-EEEecCCCCccchhHHHHhcCCC----CEEEEEeCCcChHHHHH
Confidence 368888544 2577888888888643 444 24444455 88899999 999888643 33444
Q ss_pred HHHHHHHcCCcEEEcCCCCchhhh
Q 001541 583 TLIEAAAHGLPIVATKNGGPVDIH 606 (1057)
Q Consensus 583 ~~lEAmA~G~PVVat~~Gg~~eiv 606 (1057)
+--+|-..|+|++.++..|...+.
T Consensus 67 vk~~akk~~ip~~~~~~~~~~~l~ 90 (97)
T PF10087_consen 67 VKKAAKKYGIPIIYSRSRGVSSLE 90 (97)
T ss_pred HHHHHHHcCCcEEEECCCCHHHHH
Confidence 556777889999999977766654
No 333
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=76.40 E-value=1.2e+02 Score=34.02 Aligned_cols=101 Identities=24% Similarity=0.238 Sum_probs=55.1
Q ss_pred CcEEEEEeCCCC---CCCHHHHHHHHHhcccccCCCcEEEEEec-CCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCC
Q 001541 475 KPVILALARPDP---KKNITTLVKAFGECRPLRELANLTLIMGN-RDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPK 550 (1057)
Q Consensus 475 ~~~Il~vGRl~~---~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~-~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g 550 (1057)
++.|+..-|..+ .+.+..+.+++..+.+.. ..+++++--. ..| ......+...+.-...+. .
T Consensus 172 ~~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~-g~~v~~i~~~~~~D-----------~~~~~~l~~~~~~~~~i~--~ 237 (298)
T TIGR03609 172 EPVIVVSLRPWPLLDVSRLLRLLRALDRLQRDT-GAFVLFLPFQQPQD-----------LPLARALRDQLLGPAEVL--S 237 (298)
T ss_pred CCeEEEEECCCCcCCHHHHHHHHHHHHHHHHhh-CCeEEEEeCCcchh-----------HHHHHHHHHhcCCCcEEE--e
Confidence 455555445321 223567777777775422 2334333222 111 122333333433223343 4
Q ss_pred CCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcC
Q 001541 551 HHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK 598 (1057)
Q Consensus 551 ~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~ 598 (1057)
..+.+++..+++.| +++|-..++ .++=|+.+|+|+|+-.
T Consensus 238 ~~~~~e~~~~i~~~----~~vI~~RlH-----~~I~A~~~gvP~i~i~ 276 (298)
T TIGR03609 238 PLDPEELLGLFASA----RLVIGMRLH-----ALILAAAAGVPFVALS 276 (298)
T ss_pred cCCHHHHHHHHhhC----CEEEEechH-----HHHHHHHcCCCEEEee
Confidence 44567888999999 887755432 4677899999999753
No 334
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=75.93 E-value=19 Score=39.86 Aligned_cols=105 Identities=10% Similarity=0.146 Sum_probs=63.3
Q ss_pred CCCCcEEEEEeCCCCC-------CCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHc-CCC
Q 001541 472 NPRKPVILALARPDPK-------KNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY-DLY 543 (1057)
Q Consensus 472 ~~~~~~Il~vGRl~~~-------Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~-~l~ 543 (1057)
..++++|++...+... .+....++.+..+.+.. |+..|++=..|....... . ....+. ...
T Consensus 114 ~~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~--p~~~lvvK~HP~~~~~~~--~-------~~~~~~~~~~ 182 (269)
T PF05159_consen 114 SKNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKEN--PDAKLVVKPHPDERGGNK--Y-------SYLEELPNLP 182 (269)
T ss_pred cCCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHC--CCCEEEEEECchhhCCCC--h-------hHhhhhhcCC
Confidence 4677888888887654 24455666666665433 366677755542111000 0 222222 233
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCC
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN 599 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~ 599 (1057)
+.+.+.. .-.+.+++..| |.++.- .+.+-+||+.+|+||++...
T Consensus 183 ~~~~~~~---~~~~~~Ll~~s----~~Vvti-----nStvGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 183 NVVIIDD---DVNLYELLEQS----DAVVTI-----NSTVGLEALLHGKPVIVFGR 226 (269)
T ss_pred CeEEECC---CCCHHHHHHhC----CEEEEE-----CCHHHHHHHHcCCceEEecC
Confidence 3344433 35888999999 665543 26789999999999999654
No 335
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=75.63 E-value=14 Score=37.73 Aligned_cols=61 Identities=15% Similarity=0.101 Sum_probs=38.9
Q ss_pred CcceEEEEcCCCchHH-HHHH--HhcC-CCCEEEEecCCch-hhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCC
Q 001541 305 VWPVAIHGHYADAGDS-AALL--SGAL-NVPMLFTGHSLGR-DKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASE 379 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~-a~~l--~~~~-~iP~V~t~H~l~~-~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad 379 (1057)
.+||+|.+.++.+..+ ...+ .+.+ ++|++..+-|+.. .. .|.-..+|
T Consensus 88 ~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~~~H~----------------------------~W~~~~~D 139 (169)
T PF06925_consen 88 FQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFDTVHP----------------------------FWIHPGVD 139 (169)
T ss_pred cCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCCCCCc----------------------------CeecCCCC
Confidence 6799999988765444 3333 3334 5787654444421 11 13467899
Q ss_pred EEEecCHHHHHHHH
Q 001541 380 IVITSTRQEIEEQW 393 (1057)
Q Consensus 380 ~Vi~~S~~~~~~~~ 393 (1057)
..++.|++..+++.
T Consensus 140 ~y~Vase~~~~~l~ 153 (169)
T PF06925_consen 140 RYFVASEEVKEELI 153 (169)
T ss_pred EEEECCHHHHHHHH
Confidence 99999998777654
No 336
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=75.06 E-value=15 Score=40.90 Aligned_cols=39 Identities=13% Similarity=0.176 Sum_probs=31.4
Q ss_pred chHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 789 LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 789 i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
+.+...+.++.|++. |+.++|+||=....+...++.+++
T Consensus 122 l~pG~~efl~~L~~~----GIpv~IvS~G~~~~Ie~vL~~lgl 160 (277)
T TIGR01544 122 LKDGYENFFDKLQQH----SIPVFIFSAGIGNVLEEVLRQAGV 160 (277)
T ss_pred cCcCHHHHHHHHHHC----CCcEEEEeCCcHHHHHHHHHHcCC
Confidence 345677888888876 888888888888888888888887
No 337
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=74.73 E-value=4.7 Score=48.81 Aligned_cols=75 Identities=11% Similarity=0.155 Sum_probs=51.1
Q ss_pred CCcccCcceEEEEEecCCCC-------------Cc-chHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHH---HHHHHhC
Q 001541 767 FPALRRRKHIFVISVDCDST-------------TG-LLDATKKICEAVEKERTEGSIGFILSTSMTISEI---HSFLVSG 829 (1057)
Q Consensus 767 ~~~~~~~kkLi~~DiDGTL~-------------~~-i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i---~~~l~~l 829 (1057)
...-+=..|+|+.|||||.| +. -..-+.+...++.++ |.+|+.+|.|++..+ +.+|+.+
T Consensus 523 IYlWkWn~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~Ik~N----GYk~lyLSARaIgQA~~TR~yL~nv 598 (738)
T KOG2116|consen 523 IYLWKWNDKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKIKEN----GYKILYLSARAIGQADSTRQYLKNV 598 (738)
T ss_pred EEEEecCCcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHHHhC----CeeEEEEehhhhhhhHHHHHHHHHH
Confidence 33444567999999999995 11 123456667777777 999999999998754 5677665
Q ss_pred CCCCCCCCeEEeCCCcEEEec
Q 001541 830 HLSPSDFDAFICNSGSDLYYS 850 (1057)
Q Consensus 830 gl~~~~~D~lI~~nGa~I~~~ 850 (1057)
.- |+.+.-.|-.|..+
T Consensus 599 ~Q-----dG~~LPdGPViLSP 614 (738)
T KOG2116|consen 599 EQ-----DGKKLPDGPVILSP 614 (738)
T ss_pred hh-----cCccCCCCCEEeCC
Confidence 43 44555556666555
No 338
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=74.34 E-value=10 Score=38.50 Aligned_cols=57 Identities=16% Similarity=0.037 Sum_probs=39.0
Q ss_pred ccCcceEEEEEecCCCCC-----cc---------------------------------hHHHHHHHHHHHhhhcCCCeEE
Q 001541 770 LRRRKHIFVISVDCDSTT-----GL---------------------------------LDATKKICEAVEKERTEGSIGF 811 (1057)
Q Consensus 770 ~~~~kkLi~~DiDGTL~~-----~i---------------------------------~~~t~~al~~l~~~~~~~gi~~ 811 (1057)
++.+|..+|+|+|.||.+ .. -+.+.+.|+.+++ +..+
T Consensus 2 ~~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~-----~yel 76 (156)
T TIGR02250 2 LREKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASK-----LYEM 76 (156)
T ss_pred CcCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHh-----hcEE
Confidence 467889999999999931 01 1245566666663 4677
Q ss_pred EEECCCCHHHHHHHHHhCCC
Q 001541 812 ILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 812 vIaTGR~~~~i~~~l~~lgl 831 (1057)
+|.|.-+...+..+++.++.
T Consensus 77 ~I~T~~~~~yA~~vl~~ldp 96 (156)
T TIGR02250 77 HVYTMGTRAYAQAIAKLIDP 96 (156)
T ss_pred EEEeCCcHHHHHHHHHHhCc
Confidence 77777777777777777664
No 339
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=73.80 E-value=16 Score=45.90 Aligned_cols=41 Identities=7% Similarity=0.057 Sum_probs=37.1
Q ss_pred cchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCC
Q 001541 788 GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 832 (1057)
Q Consensus 788 ~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~ 832 (1057)
.+-+.++++++.++.+ |+.|-..||-+...++.+..++||-
T Consensus 647 PvRPgV~~AV~~Cq~A----GItVRMVTGDNI~TAkAIA~eCGIL 687 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRA----GITVRMVTGDNINTAKAIARECGIL 687 (1034)
T ss_pred CCCCCcHHHHHHHHHc----CcEEEEEeCCcHHHHHHHHHHcccc
Confidence 4567899999999986 9999999999999999999999983
No 340
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=73.25 E-value=9.3 Score=48.53 Aligned_cols=41 Identities=15% Similarity=0.223 Sum_probs=38.7
Q ss_pred CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 787 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 787 ~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
+++.+.++..|+.|.+. +|..|.|||=++..+....++.|+
T Consensus 704 NkLK~~T~~VI~eL~~A----nIRtVMcTGDNllTaisVakeCgm 744 (1140)
T KOG0208|consen 704 NKLKEETKRVIDELNRA----NIRTVMCTGDNLLTAISVAKECGM 744 (1140)
T ss_pred cccccccHHHHHHHHhh----cceEEEEcCCchheeeehhhcccc
Confidence 78899999999999997 899999999999999999999998
No 341
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=72.88 E-value=18 Score=37.26 Aligned_cols=31 Identities=13% Similarity=0.131 Sum_probs=24.7
Q ss_pred CcceEEEEcCCCchHHHHHHHhcC------CCCEEEE
Q 001541 305 VWPVAIHGHYADAGDSAALLSGAL------NVPMLFT 335 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~~------~iP~V~t 335 (1057)
.+||+|.++.+..+.....+++.+ +.++|+-
T Consensus 91 ~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyI 127 (170)
T PF08660_consen 91 ERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYI 127 (170)
T ss_pred hCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEE
Confidence 579999999997777777777777 8888763
No 342
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=70.57 E-value=11 Score=45.62 Aligned_cols=153 Identities=16% Similarity=0.124 Sum_probs=97.6
Q ss_pred CCcEEEEEeCCCC-CCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCC
Q 001541 474 RKPVILALARPDP-KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHH 552 (1057)
Q Consensus 474 ~~~~Il~vGRl~~-~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v 552 (1057)
.+++-+..|.-++ .||-+..++++.+.. .++--|.+.++ . ...+..-|.=+|.+
T Consensus 276 r~~~AlVyGK~~~~w~~k~~~l~~l~~~~------eih~tV~~~~~---~----------------~~~~P~~V~NHG~l 330 (559)
T PF15024_consen 276 RKNQALVYGKERYMWKGKEKYLDVLHKYM------EIHGTVYDEPQ---R----------------PPNVPSFVKNHGIL 330 (559)
T ss_pred ccceeEEEccchhhhcCcHHHHHHHHhhc------EEEEEeccCCC---C----------------CcccchhhhhcCcC
Confidence 4556666676553 677788888776653 22222222211 0 01122235557888
Q ss_pred CCCcHHHHHHHhhcCCcEEEEcCC-CCCCCHHHHHHHHcCCcEEEcCCCCch---------------hhh------h---
Q 001541 553 KQSDVPEIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPV---------------DIH------R--- 607 (1057)
Q Consensus 553 ~~~dl~~ly~~Aa~~~dv~v~ps~-~Egfgl~~lEAmA~G~PVVat~~Gg~~---------------eiv------~--- 607 (1057)
++.|+..+++.| -|||---+ +| |=+.+||+|.|+|.|-...-.+. ++- +
T Consensus 331 ~~~ef~~lL~~a----kvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~i 404 (559)
T PF15024_consen 331 SGDEFQQLLRKA----KVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFI 404 (559)
T ss_pred CHHHHHHHHHhh----hEeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhC
Confidence 899999999999 79885421 22 44789999999998876532221 111 0
Q ss_pred cCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHc
Q 001541 608 VLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAG 666 (1057)
Q Consensus 608 ~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~~ 666 (1057)
..-.-+.|+-+|.+++.+||.++++.+- --++ -.|+-+.+.++...+++.
T Consensus 405 G~PhVytVd~~n~~~v~~Avk~il~~~v---------~Py~P~efT~egmLeRv~~~ie~ 455 (559)
T PF15024_consen 405 GEPHVYTVDINNSTEVEAAVKAILATPV---------EPYLPYEFTCEGMLERVNALIEK 455 (559)
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHHhcCC---------CCcCCcccCHHHHHHHHHHHHHh
Confidence 1123577899999999999999998652 1345 578888887777777653
No 343
>COG4996 Predicted phosphatase [General function prediction only]
Probab=68.09 E-value=13 Score=36.18 Aligned_cols=54 Identities=13% Similarity=-0.016 Sum_probs=42.2
Q ss_pred eEEEEEecCCC-C--------------------------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHH
Q 001541 775 HIFVISVDCDS-T--------------------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLV 827 (1057)
Q Consensus 775 kLi~~DiDGTL-~--------------------------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~ 827 (1057)
++|+||.|||+ . -.+-+..++.++.++.. |..+..+|=--..-+.+.|.
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warns----G~i~~~~sWN~~~kA~~aLr 76 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNS----GYILGLASWNFEDKAIKALR 76 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhC----CcEEEEeecCchHHHHHHHH
Confidence 47899999998 1 12446778888888875 78888888888888888888
Q ss_pred hCCCC
Q 001541 828 SGHLS 832 (1057)
Q Consensus 828 ~lgl~ 832 (1057)
.+++.
T Consensus 77 al~~~ 81 (164)
T COG4996 77 ALDLL 81 (164)
T ss_pred Hhchh
Confidence 88874
No 344
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=66.61 E-value=54 Score=37.12 Aligned_cols=100 Identities=11% Similarity=-0.026 Sum_probs=58.0
Q ss_pred CCcEEEEEeCCCCCCCHH--HHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001541 474 RKPVILALARPDPKKNIT--TLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 551 (1057)
Q Consensus 474 ~~~~Il~vGRl~~~Kgi~--~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~ 551 (1057)
++.++++.|.-.+.|.++ ...+.+..+.+ ....+ +++|++++. ......+.+..+ ...+.|.
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~--~~~~~-vl~~g~~~e----------~~~~~~i~~~~~---~~~l~g~ 242 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLA--RGLQI-VLPWGNDAE----------KQRAERIAEALP---GAVVLPK 242 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHH--CCCeE-EEeCCCHHH----------HHHHHHHHhhCC---CCeecCC
Confidence 345667777656677654 56666666643 12333 344433320 112223333222 2356688
Q ss_pred CCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcC
Q 001541 552 HKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK 598 (1057)
Q Consensus 552 v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~ 598 (1057)
.+-.++.++++.| +++|-.- .. .+-=|.|.|+|+|+--
T Consensus 243 ~sL~el~ali~~a----~l~I~~D---Sg--p~HlAaa~g~P~i~lf 280 (319)
T TIGR02193 243 MSLAEVAALLAGA----DAVVGVD---TG--LTHLAAALDKPTVTLY 280 (319)
T ss_pred CCHHHHHHHHHcC----CEEEeCC---Ch--HHHHHHHcCCCEEEEE
Confidence 8888999999999 8988653 22 2334678899999854
No 345
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=66.08 E-value=5.7 Score=41.61 Aligned_cols=35 Identities=9% Similarity=0.105 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHhhhcCCCeEEEEECCCCHH-------HHHHHHHhC
Q 001541 791 DATKKICEAVEKERTEGSIGFILSTSMTIS-------EIHSFLVSG 829 (1057)
Q Consensus 791 ~~t~~al~~l~~~~~~~gi~~vIaTGR~~~-------~i~~~l~~l 829 (1057)
+...++|++|.+. |..+++.|+|+.. ....|+++.
T Consensus 76 ~gA~e~l~~L~~~----g~~~~~Itar~~~~~~~~~~~k~~Wl~~h 117 (191)
T PF06941_consen 76 PGAVEALKKLRDK----GHEIVIITARPPEFPDHSAEEKREWLERH 117 (191)
T ss_dssp TTHHHHHHHHHTS----TTEEEEEEE-SSSSGCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc----CCcEEEEEecCccccchHHHHHHHHHHHH
Confidence 3456667777764 5445556666543 445666665
No 346
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=65.77 E-value=25 Score=38.22 Aligned_cols=51 Identities=18% Similarity=0.320 Sum_probs=42.0
Q ss_pred EecCCCCHHHHHHHHHHHh---CCCcccEEEEecCCCCCCccccccCcceEEEeCC
Q 001541 953 VIPVLASRSQALRYLYLRW---GVELSKMVVFVGESGDTDYEGLLGGVHKTVILKG 1005 (1057)
Q Consensus 953 I~p~gasKg~AL~~L~~~l---gI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgN 1005 (1057)
--|.+.-||..|+.+.... |++-++++. +||+.| ||-.+++--..-++|.-
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviY-iGDG~n-D~Cp~~~L~~~D~v~~R 197 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIY-IGDGRN-DFCPALRLRPRDVVFPR 197 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEE-ECCCCC-CcCcccccCCCCEEecC
Confidence 4578888999999999884 777777877 999999 99999986666678864
No 347
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=64.96 E-value=12 Score=44.70 Aligned_cols=31 Identities=32% Similarity=0.269 Sum_probs=27.4
Q ss_pred CCCcHHHHHHHHHHHHhc---------CCCeeeEEEEecCCC
Q 001541 189 DTGGQVKYVVELARALGS---------MPGVYRVDLLTRQVS 221 (1057)
Q Consensus 189 d~GG~~~~v~~LA~aLa~---------~Ggv~~V~vit~~~~ 221 (1057)
..||.++-+++.+-+|.. .| ++|.++|.+..
T Consensus 45 ~~gg~er~~v~~~~~l~s~~~~lg~~d~G--~qV~~l~~h~~ 84 (495)
T KOG0853|consen 45 GIGGAERLVVDAAVHLLSGQDVLGLPDTG--GQVVYLTSHED 84 (495)
T ss_pred ccCchHHHhHHHHHHHHhcccccCCCCCC--ceEEEEehhhh
Confidence 378999999999999999 99 99999998763
No 348
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=63.93 E-value=44 Score=40.29 Aligned_cols=72 Identities=14% Similarity=0.158 Sum_probs=50.1
Q ss_pred CCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCC-cEEEcCC--CCchhhhhcCCceEEeCCCCHHHHHHHHHHH
Q 001541 554 QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL-PIVATKN--GGPVDIHRVLDNGLLVDPHDQQSVADALLKL 630 (1057)
Q Consensus 554 ~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~-PVVat~~--Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~l 630 (1057)
.....+.++.+ -.++.|+-.++..-.++||+.+|| |||.++. ....+.+.-..-++.++ .+++-+.|.+.
T Consensus 334 ~~~y~~~m~~S----~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~---~~~v~~~~~~i 406 (464)
T KOG1021|consen 334 PLNYMEGMQDS----KFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVP---EKDVPELIKNI 406 (464)
T ss_pred cchHHHHhhcC----eEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEE---HHHhhhHHHHH
Confidence 46788899999 888999988888899999999995 9999884 33344443334456664 34444444555
Q ss_pred Hh
Q 001541 631 VA 632 (1057)
Q Consensus 631 l~ 632 (1057)
|.
T Consensus 407 L~ 408 (464)
T KOG1021|consen 407 LL 408 (464)
T ss_pred HH
Confidence 44
No 349
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=63.47 E-value=82 Score=36.32 Aligned_cols=104 Identities=13% Similarity=0.086 Sum_probs=60.1
Q ss_pred CCcEEEEEeCCCCCCCHH--HHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001541 474 RKPVILALARPDPKKNIT--TLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 551 (1057)
Q Consensus 474 ~~~~Il~vGRl~~~Kgi~--~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~ 551 (1057)
+..+++..|.-.+.|..+ ...+.+..+.+ ....+ +++|+..+. + ......+.+.......+.+.|.
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~--~~~~v-vl~ggp~e~-e--------~~~~~~i~~~~~~~~~~~l~g~ 250 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA--RGYEV-VLTSGPDKD-D--------LACVNEIAQGCQTPPVTALAGK 250 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH--CCCeE-EEEcCCChH-H--------HHHHHHHHHhcCCCccccccCC
Confidence 345667777666667554 55555555532 12233 344543221 1 1112233332222234667888
Q ss_pred CCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcC
Q 001541 552 HKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK 598 (1057)
Q Consensus 552 v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~ 598 (1057)
.+-.++.++++.| +++|-.. + -.+-=|.|.|+|+|+-.
T Consensus 251 ~sL~el~ali~~a----~l~v~nD---S--Gp~HlAaA~g~P~v~lf 288 (352)
T PRK10422 251 TTFPELGALIDHA----QLFIGVD---S--APAHIAAAVNTPLICLF 288 (352)
T ss_pred CCHHHHHHHHHhC----CEEEecC---C--HHHHHHHHcCCCEEEEE
Confidence 8889999999999 8988553 2 22344678899999854
No 350
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=62.96 E-value=29 Score=38.46 Aligned_cols=99 Identities=16% Similarity=0.117 Sum_probs=59.4
Q ss_pred EEEEEeCCCCCCC--HHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCC
Q 001541 477 VILALARPDPKKN--ITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQ 554 (1057)
Q Consensus 477 ~Il~vGRl~~~Kg--i~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~ 554 (1057)
+++..|.-.+.|. .+...+.++.+... ...+ +++|+.++ ......+.+.++-...+.+.|..+.
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~--~~~i-vl~g~~~e-----------~~~~~~i~~~~~~~~~~~~~~~~~l 189 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLAR--GARV-VLTGGPAE-----------RELAEEIAAALGGPRVVNLAGKTSL 189 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHC--CCEE-EEEechhh-----------HHHHHHHHHhcCCCccccCcCCCCH
Confidence 4555555455553 45777777777542 3333 35565443 1223333333322234556777778
Q ss_pred CcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcC
Q 001541 555 SDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK 598 (1057)
Q Consensus 555 ~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~ 598 (1057)
.++..+++.| |++|-+. . |..- =|.|.|+|+|+--
T Consensus 190 ~e~~~li~~~----~l~I~~D---s-g~~H-lA~a~~~p~i~l~ 224 (279)
T cd03789 190 RELAALLARA----DLVVTND---S-GPMH-LAAALGTPTVALF 224 (279)
T ss_pred HHHHHHHHhC----CEEEeeC---C-HHHH-HHHHcCCCEEEEE
Confidence 8999999999 9999763 2 3333 3469999999854
No 351
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=60.48 E-value=21 Score=36.41 Aligned_cols=53 Identities=15% Similarity=0.019 Sum_probs=40.6
Q ss_pred ceEEEEEecCCCC-------C--------------------cchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHH
Q 001541 774 KHIFVISVDCDST-------T--------------------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFL 826 (1057)
Q Consensus 774 kkLi~~DiDGTL~-------~--------------------~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l 826 (1057)
|+.+|+|+|+||. . ..-+-+.+.|+.+.+ ...++|.|.-+...+..++
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~-----~yei~I~Ts~~~~yA~~il 75 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSK-----WYELVIFTASLEEYADPVL 75 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHh-----cCEEEEEcCCcHHHHHHHH
Confidence 4689999999992 1 122457788888875 3678888888888888999
Q ss_pred HhCCC
Q 001541 827 VSGHL 831 (1057)
Q Consensus 827 ~~lgl 831 (1057)
+.++.
T Consensus 76 ~~ldp 80 (162)
T TIGR02251 76 DILDR 80 (162)
T ss_pred HHHCc
Confidence 88775
No 352
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=59.14 E-value=8.7 Score=33.53 Aligned_cols=44 Identities=27% Similarity=0.260 Sum_probs=34.8
Q ss_pred HHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcce-EEEeCCCc
Q 001541 962 QALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHK-TVILKGIC 1007 (1057)
Q Consensus 962 ~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~-gVAMgNa~ 1007 (1057)
..+...+++++++++++++ +||+-.|| +.+=..+|. +|.+..+.
T Consensus 8 ~~~~~a~~~~~~~~~~~~~-VGD~~~~D-i~~a~~~G~~~ilV~tG~ 52 (75)
T PF13242_consen 8 GMLEQALKRLGVDPSRCVM-VGDSLETD-IEAAKAAGIDTILVLTGV 52 (75)
T ss_dssp HHHHHHHHHHTSGGGGEEE-EESSTTTH-HHHHHHTTSEEEEESSSS
T ss_pred HHHHHHHHHcCCCHHHEEE-EcCCcHhH-HHHHHHcCCcEEEECCCC
Confidence 4577888999999999999 99994448 999888884 46666655
No 353
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=59.11 E-value=78 Score=38.20 Aligned_cols=160 Identities=17% Similarity=0.186 Sum_probs=88.2
Q ss_pred CCcEEEEEeCCC-----CCCCHHHHHHHHHhcccccCCCcEEE--EEecCCCCcccchhhHHHHHHHHHHHHHcC--CCC
Q 001541 474 RKPVILALARPD-----PKKNITTLVKAFGECRPLRELANLTL--IMGNRDGIDEMSSTSASVLLSVLKLIDKYD--LYG 544 (1057)
Q Consensus 474 ~~~~Il~vGRl~-----~~Kgi~~Ll~A~~~l~~~~~~~~l~L--IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~--l~~ 544 (1057)
...++++.|... +.+-...+..|++.+ + ++.+ ..-..+... ..+... -.+
T Consensus 277 ~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~-~-----~~~FiW~~~~~~~~~---------------~~~~~~~~~~~ 335 (496)
T KOG1192|consen 277 HSVVYISFGSMVNSADLPEEQKKELAKALESL-Q-----GVTFLWKYRPDDSIY---------------FPEGLPNRGRG 335 (496)
T ss_pred CCeEEEECCcccccccCCHHHHHHHHHHHHhC-C-----CceEEEEecCCcchh---------------hhhcCCCCCcC
Confidence 356677778775 445566777888776 2 3332 222221100 111111 245
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCC-C---C-chhhhhcCCceEEeC--C
Q 001541 545 QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN-G---G-PVDIHRVLDNGLLVD--P 617 (1057)
Q Consensus 545 ~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~-G---g-~~eiv~~~~~Gllv~--p 617 (1057)
+|.+.+++||.++. +... ..++|| .+-|+|-+ +|++.+|+|+|+.+. | - ..-+.+.+..+++.. .
T Consensus 336 nV~~~~W~PQ~~ll--l~H~--~v~~Fv---THgG~nSt-~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~ 407 (496)
T KOG1192|consen 336 NVVLSKWAPQNDLL--LDHP--AVGGFV---THGGWNST-LESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRDL 407 (496)
T ss_pred ceEEecCCCcHHHh--cCCC--cCcEEE---ECCcccHH-HHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhhc
Confidence 79999999999876 2222 124444 13455555 999999999997553 2 1 223334444444332 2
Q ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHH
Q 001541 618 HDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRI 664 (1057)
Q Consensus 618 ~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~ 664 (1057)
.+.+ +.+++..++.+++..+...+-..... +-.+- ..+..+.+..
T Consensus 408 ~~~~-~~~~~~~il~~~~y~~~~~~l~~~~~~~p~~~-~~~~~~~e~~ 453 (496)
T KOG1192|consen 408 VSEE-LLEAIKEILENEEYKEAAKRLSEILRDQPISP-ELAVKWVEFV 453 (496)
T ss_pred CcHH-HHHHHHHHHcChHHHHHHHHHHHHHHcCCCCH-HHHHHHHHHH
Confidence 2334 88999999988876554444443333 34555 5555444433
No 354
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=58.45 E-value=5.5 Score=41.85 Aligned_cols=34 Identities=15% Similarity=0.204 Sum_probs=28.9
Q ss_pred HHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcc
Q 001541 962 QALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVH 998 (1057)
Q Consensus 962 ~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag 998 (1057)
..+..+++.++++.++|++ +||+-| | ..|++.||
T Consensus 182 k~~~~~i~~l~~~~~~v~~-vGDg~n-D-~~al~~Ag 215 (215)
T PF00702_consen 182 KIFLRIIKELQVKPGEVAM-VGDGVN-D-APALKAAG 215 (215)
T ss_dssp HHHHHHHHHHTCTGGGEEE-EESSGG-H-HHHHHHSS
T ss_pred hhHHHHHHHHhcCCCEEEE-EccCHH-H-HHHHHhCc
Confidence 3668889999999997777 888888 9 99999876
No 355
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=57.92 E-value=18 Score=37.91 Aligned_cols=45 Identities=18% Similarity=0.211 Sum_probs=36.8
Q ss_pred HHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 793 TKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 793 t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
..++|+.|+++ |+.++|+||.+...+..+++.+|+. .-||.+++.
T Consensus 111 ~~~~L~~l~~~----g~~~~i~T~~~~~~~~~~l~~~gl~-~~f~~~~~~ 155 (197)
T TIGR01548 111 PKGLLRELHRA----PKGMAVVTGRPRKDAAKFLTTHGLE-ILFPVQIWM 155 (197)
T ss_pred HHHHHHHHHHc----CCcEEEECCCCHHHHHHHHHHcCch-hhCCEEEee
Confidence 37888888875 8999999999999999999999985 235656553
No 356
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=56.68 E-value=8.1 Score=41.26 Aligned_cols=44 Identities=16% Similarity=0.052 Sum_probs=33.7
Q ss_pred cCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeC
Q 001541 955 PVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 1004 (1057)
Q Consensus 955 p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMg 1004 (1057)
..|..|-..|+.++ |.+.+..++ -||+-+ | .+||+.|++++++.
T Consensus 158 c~g~~Kv~rl~~~~---~~~~~~~~a-YsDS~~-D-~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 158 CLGHEKVAQLEQKI---GSPLKLYSG-YSDSKQ-D-NPLLAFCEHRWRVS 201 (210)
T ss_pred CCChHHHHHHHHHh---CCChhheEE-ecCCcc-c-HHHHHhCCCcEEEC
Confidence 44556777777655 456667777 788888 8 99999999999985
No 357
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=56.65 E-value=93 Score=35.31 Aligned_cols=46 Identities=13% Similarity=-0.051 Sum_probs=35.0
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcC
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK 598 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~ 598 (1057)
+.+.+.|..+-.++..+++.| |++|-.. .-.+-=|.|+|+|+|+--
T Consensus 234 ~~~~l~g~~sL~elaali~~a----~l~I~nD-----SGp~HlA~A~g~p~valf 279 (322)
T PRK10964 234 PYVEVLPKLSLEQVARVLAGA----KAVVSVD-----TGLSHLTAALDRPNITLY 279 (322)
T ss_pred CcceecCCCCHHHHHHHHHhC----CEEEecC-----CcHHHHHHHhCCCEEEEE
Confidence 346677888888999999999 8988653 123444788999999954
No 358
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=55.96 E-value=10 Score=42.43 Aligned_cols=70 Identities=21% Similarity=0.213 Sum_probs=48.8
Q ss_pred CcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCC-cEEEcCC--CCchhhhhcCCceEEeCCCCHHHHHHHHH
Q 001541 555 SDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL-PIVATKN--GGPVDIHRVLDNGLLVDPHDQQSVADALL 628 (1057)
Q Consensus 555 ~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~-PVVat~~--Gg~~eiv~~~~~Gllv~p~d~~~la~aI~ 628 (1057)
.+..+.|+.+ ..++.|.-..++..-++|||++|+ |||.++. =...+++.=....+.+++.+..+|.+.|+
T Consensus 228 ~~~~~~l~~S----~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL~ 300 (302)
T PF03016_consen 228 SEYMELLRNS----KFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEILR 300 (302)
T ss_pred hHHHHhcccC----eEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHHh
Confidence 4577888888 788887766668889999999995 8988762 22344554344567777666655555543
No 359
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=54.55 E-value=35 Score=41.41 Aligned_cols=26 Identities=12% Similarity=0.052 Sum_probs=21.8
Q ss_pred EEEECCCCHHHHHHHHHh-CCCCCCCCCeEEe
Q 001541 811 FILSTSMTISEIHSFLVS-GHLSPSDFDAFIC 841 (1057)
Q Consensus 811 ~vIaTGR~~~~i~~~l~~-lgl~~~~~D~lI~ 841 (1057)
.+|+|+-+...+++++++ +|+ |.+||
T Consensus 125 ~vvVSASp~~~Vepfa~~~LGi-----d~VIg 151 (497)
T PLN02177 125 RYIITASPRIMVEPFVKTFLGA-----DKVLG 151 (497)
T ss_pred EEEEECCcHHHHHHHHHHcCCC-----CEEEe
Confidence 389999999999999987 788 55665
No 360
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=54.32 E-value=7.1 Score=41.23 Aligned_cols=41 Identities=27% Similarity=0.238 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEe
Q 001541 960 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 1003 (1057)
Q Consensus 960 Kg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAM 1003 (1057)
+...+.++++++|++++++++ +||+.+ | +.+-+.+|..++.
T Consensus 143 ~p~~~~~~~~~~~~~~~~~~~-igDs~~-d-~~aa~~aG~~~i~ 183 (213)
T TIGR01449 143 HPDPLLLAAERLGVAPQQMVY-VGDSRV-D-IQAARAAGCPSVL 183 (213)
T ss_pred ChHHHHHHHHHcCCChhHeEE-eCCCHH-H-HHHHHHCCCeEEE
Confidence 467899999999999999988 899988 9 9999999977653
No 361
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=54.29 E-value=19 Score=35.10 Aligned_cols=50 Identities=4% Similarity=0.002 Sum_probs=42.8
Q ss_pred EEEecCCCC--CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCC
Q 001541 778 VISVDCDST--TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 832 (1057)
Q Consensus 778 ~~DiDGTL~--~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~ 832 (1057)
+-++++|+. .++-+++.+.|+.|... +.++||||-...++.+.++-.|++
T Consensus 18 ~~~v~~tiatgGklf~ev~e~iqeL~d~-----V~i~IASgDr~gsl~~lae~~gi~ 69 (152)
T COG4087 18 AGKVLYTIATGGKLFSEVSETIQELHDM-----VDIYIASGDRKGSLVQLAEFVGIP 69 (152)
T ss_pred cceEEEEEccCcEEcHhhHHHHHHHHHh-----heEEEecCCcchHHHHHHHHcCCc
Confidence 457888883 56777999999999973 899999999999999999988884
No 362
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=54.05 E-value=20 Score=37.61 Aligned_cols=41 Identities=12% Similarity=0.060 Sum_probs=37.8
Q ss_pred CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 787 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 787 ~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
..+-+.++++|+.|++. |+.++|+||-+...+..+.+.+|+
T Consensus 126 d~~~~~~~~~l~~L~~~----Gi~~~i~TGD~~~~a~~~~~~lgi 166 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEA----GIKVAILTGDNESTASAIAKQLGI 166 (215)
T ss_dssp EEBHTTHHHHHHHHHHT----TEEEEEEESSEHHHHHHHHHHTTS
T ss_pred Ccchhhhhhhhhhhhcc----Ccceeeeecccccccccccccccc
Confidence 35677899999999997 999999999999999999999999
No 363
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=53.86 E-value=21 Score=38.95 Aligned_cols=48 Identities=19% Similarity=0.115 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCC
Q 001541 791 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNS 843 (1057)
Q Consensus 791 ~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~n 843 (1057)
+.+.+.|+.|+++ |+.++|+|+.+...+...++.+++. .-||.+||+.
T Consensus 111 pgv~e~L~~L~~~----g~~l~I~Tn~~~~~~~~~l~~~gl~-~~Fd~iv~~~ 158 (248)
T PLN02770 111 NGLYKLKKWIEDR----GLKRAAVTNAPRENAELMISLLGLS-DFFQAVIIGS 158 (248)
T ss_pred ccHHHHHHHHHHc----CCeEEEEeCCCHHHHHHHHHHcCCh-hhCcEEEecC
Confidence 3667888999886 8999999999999999999999984 2467777754
No 364
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=53.71 E-value=23 Score=37.94 Aligned_cols=46 Identities=17% Similarity=0.215 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEe
Q 001541 791 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFIC 841 (1057)
Q Consensus 791 ~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~ 841 (1057)
+.++++|..|+++ |+.++|+|+++...+..+++.+|+. .-|+.++|
T Consensus 92 ~gv~e~L~~L~~~----g~~l~i~T~k~~~~~~~~l~~~gl~-~~F~~i~g 137 (220)
T COG0546 92 PGVKELLAALKSA----GYKLGIVTNKPERELDILLKALGLA-DYFDVIVG 137 (220)
T ss_pred CCHHHHHHHHHhC----CCeEEEEeCCcHHHHHHHHHHhCCc-cccceEEc
Confidence 3677899999987 8999999999999999999999985 23455555
No 365
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=52.59 E-value=15 Score=37.93 Aligned_cols=40 Identities=10% Similarity=-0.005 Sum_probs=32.4
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEE
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTV 1001 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gV 1001 (1057)
-+-..+.+.++++|++++++++ +||+.. | ++.=..+|..+
T Consensus 143 P~p~~~~~~~~~~~~~~~~~l~-igDs~~-d-i~aA~~aG~~~ 182 (188)
T PRK10725 143 PAPDTFLRCAQLMGVQPTQCVV-FEDADF-G-IQAARAAGMDA 182 (188)
T ss_pred CChHHHHHHHHHcCCCHHHeEE-EeccHh-h-HHHHHHCCCEE
Confidence 3556799999999999999998 788877 8 77777777554
No 366
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=52.51 E-value=7.3 Score=40.95 Aligned_cols=12 Identities=8% Similarity=0.149 Sum_probs=11.2
Q ss_pred eEEEEEecCCCC
Q 001541 775 HIFVISVDCDST 786 (1057)
Q Consensus 775 kLi~~DiDGTL~ 786 (1057)
++++||+||||+
T Consensus 2 ~~v~FD~DGTL~ 13 (205)
T PRK13582 2 EIVCLDLEGVLV 13 (205)
T ss_pred eEEEEeCCCCCh
Confidence 689999999998
No 367
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=50.85 E-value=47 Score=35.94 Aligned_cols=104 Identities=12% Similarity=0.076 Sum_probs=56.4
Q ss_pred CCCcEEEEEeCCCCCCCHHH--HHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCC
Q 001541 473 PRKPVILALARPDPKKNITT--LVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPK 550 (1057)
Q Consensus 473 ~~~~~Il~vGRl~~~Kgi~~--Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g 550 (1057)
++..+++..|.-.+.|.+.. ..+.+..+.+.. ..+ +++|+..+. ..+.+..+..... ...+.+.|
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~--~~v-vl~g~~~~~---------~~~~~~~~~~~~~-~~~~~~~~ 170 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERG--YRV-VLLGGPEEQ---------EKEIADQIAAGLQ-NPVINLAG 170 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT---EE-EE--SSHHH---------HHHHHHHHHTTHT-TTTEEETT
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhC--ceE-EEEccchHH---------HHHHHHHHHHhcc-cceEeecC
Confidence 34456777777677887654 666666665322 233 455654320 0112222222221 12688889
Q ss_pred CCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcC
Q 001541 551 HHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK 598 (1057)
Q Consensus 551 ~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~ 598 (1057)
..+-.++..+++.| |++|-+- .-.+-=|.|.|+|+|+--
T Consensus 171 ~~~l~e~~ali~~a----~~~I~~D-----tg~~HlA~a~~~p~v~lf 209 (247)
T PF01075_consen 171 KTSLRELAALISRA----DLVIGND-----TGPMHLAAALGTPTVALF 209 (247)
T ss_dssp TS-HHHHHHHHHTS----SEEEEES-----SHHHHHHHHTT--EEEEE
T ss_pred CCCHHHHHHHHhcC----CEEEecC-----ChHHHHHHHHhCCEEEEe
Confidence 88889999999999 9998763 233455788999999964
No 368
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=50.54 E-value=20 Score=38.07 Aligned_cols=49 Identities=18% Similarity=0.293 Sum_probs=39.4
Q ss_pred hHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCC-CCCCeEEeC
Q 001541 790 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSP-SDFDAFICN 842 (1057)
Q Consensus 790 ~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~-~~~D~lI~~ 842 (1057)
.+.+.+.|+.|+++ |+.++|+|+.+...+...++.+++.. ..|+.++|+
T Consensus 89 ~~G~~~~L~~L~~~----g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~ 138 (220)
T TIGR03351 89 LPGAEEAFRSLRSS----GIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCP 138 (220)
T ss_pred CCCHHHHHHHHHHC----CCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcC
Confidence 45778999999986 89999999999999999999998731 235666663
No 369
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=50.24 E-value=23 Score=37.55 Aligned_cols=47 Identities=15% Similarity=0.130 Sum_probs=38.2
Q ss_pred hHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEe
Q 001541 790 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFIC 841 (1057)
Q Consensus 790 ~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~ 841 (1057)
-+.+.++|+.|+++ |+.++|+|+.+...+...++.+|+. .-|+.+++
T Consensus 84 ~~g~~~~l~~L~~~----g~~~~i~S~~~~~~~~~~l~~~gl~-~~f~~i~~ 130 (214)
T PRK13288 84 YETVYETLKTLKKQ----GYKLGIVTTKMRDTVEMGLKLTGLD-EFFDVVIT 130 (214)
T ss_pred CcCHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHcCCh-hceeEEEe
Confidence 45778999999986 8999999999999999999999984 22455554
No 370
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=50.23 E-value=17 Score=38.56 Aligned_cols=52 Identities=21% Similarity=0.300 Sum_probs=44.9
Q ss_pred EEEecCCCCHHHHHHHHHHHh---CCCcccEEEEecCCCCCCccccccCcceEEEeC
Q 001541 951 INVIPVLASRSQALRYLYLRW---GVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 1004 (1057)
Q Consensus 951 lEI~p~gasKg~AL~~L~~~l---gI~~e~viaf~GD~~n~D~~eML~~ag~gVAMg 1004 (1057)
-...|.+.-||.-|..+.... |+.-+.++- +||++| ||-+|+.-.+.-|||-
T Consensus 155 C~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iY-vGDG~n-D~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 155 CNLCPSNMCKGLVLDELVASQLKDGVRYERLIY-VGDGAN-DFCPVLRLRACDVAMP 209 (256)
T ss_pred cCcCchhhhhhHHHHHHHHHHhhcCCceeeEEE-EcCCCC-CcCcchhcccCceecc
Confidence 356899999999998886554 888888887 999999 9999999999999996
No 371
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=50.19 E-value=1.1e+02 Score=35.00 Aligned_cols=102 Identities=12% Similarity=0.091 Sum_probs=58.6
Q ss_pred CCCCcE-EEEEeC-CCCCCCHH--HHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEE
Q 001541 472 NPRKPV-ILALAR-PDPKKNIT--TLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVA 547 (1057)
Q Consensus 472 ~~~~~~-Il~vGR-l~~~Kgi~--~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~ 547 (1057)
.+++++ ++..|. ..+.|.+. ...+.+..+.+ ....+ +++|+..+. +....+.+... ...+.
T Consensus 171 ~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~--~~~~i-vl~G~~~e~-----------~~~~~i~~~~~-~~~~~ 235 (334)
T TIGR02195 171 DTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLID--QGYQV-VLFGSAKDH-----------PAGNEIEALLP-GELRN 235 (334)
T ss_pred CCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHH--CCCEE-EEEEChhhH-----------HHHHHHHHhCC-ccccc
Confidence 334554 456554 34666554 56666666543 12233 456765441 11222222221 12344
Q ss_pred eCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEc
Q 001541 548 YPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT 597 (1057)
Q Consensus 548 f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat 597 (1057)
+.|..+-.++..+++.| |++|-.- + -.+-=|.|.|+|+|+-
T Consensus 236 l~g~~sL~el~ali~~a----~l~I~~D---S--Gp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 236 LAGETSLDEAVDLIALA----KAVVTND---S--GLMHVAAALNRPLVAL 276 (334)
T ss_pred CCCCCCHHHHHHHHHhC----CEEEeeC---C--HHHHHHHHcCCCEEEE
Confidence 77888888999999999 8988653 2 2234467899999984
No 372
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=49.11 E-value=22 Score=37.45 Aligned_cols=47 Identities=17% Similarity=0.223 Sum_probs=37.7
Q ss_pred hHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEe
Q 001541 790 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFIC 841 (1057)
Q Consensus 790 ~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~ 841 (1057)
-+.+.+.|+.|+++ |+.++|+|+.+...+...++.+++. .-||.+++
T Consensus 77 ~~g~~~~L~~L~~~----g~~~~i~Sn~~~~~~~~~l~~~~l~-~~f~~i~~ 123 (205)
T TIGR01454 77 FPGVPELLAELRAD----GVGTAIATGKSGPRARSLLEALGLL-PLFDHVIG 123 (205)
T ss_pred CCCHHHHHHHHHHC----CCeEEEEeCCchHHHHHHHHHcCCh-hheeeEEe
Confidence 45778899999986 8999999999999999999999984 12454444
No 373
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=48.55 E-value=25 Score=37.01 Aligned_cols=48 Identities=15% Similarity=0.125 Sum_probs=38.3
Q ss_pred hHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 790 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 790 ~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
-+.+.++|+.|+++ |+.++|+|+.+...+..+++.+++. .-||.++|+
T Consensus 87 ~~g~~~~L~~l~~~----g~~~~i~S~~~~~~~~~~l~~~~l~-~~f~~~~~~ 134 (213)
T TIGR01449 87 FPGVEATLGALRAK----GLRLGLVTNKPTPLARPLLELLGLA-KYFSVLIGG 134 (213)
T ss_pred CCCHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHcCcH-hhCcEEEec
Confidence 34677888999886 8999999999999999999999984 235666553
No 374
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=47.83 E-value=47 Score=32.12 Aligned_cols=41 Identities=15% Similarity=0.127 Sum_probs=33.5
Q ss_pred CHHHHHHHHHHHh-CCCcccEEEEecC-CCCCCccccccCcceEEE
Q 001541 959 SRSQALRYLYLRW-GVELSKMVVFVGE-SGDTDYEGLLGGVHKTVI 1002 (1057)
Q Consensus 959 sKg~AL~~L~~~l-gI~~e~viaf~GD-~~n~D~~eML~~ag~gVA 1002 (1057)
.|...+.++++++ ++++++++. +|| ... | +.+-+.+|...+
T Consensus 86 P~~~~~~~~~~~~~~~~~~~~v~-IGD~~~~-D-i~~A~~~Gi~~i 128 (132)
T TIGR01662 86 PKPGMFLEALKRFNEIDPEESVY-VGDQDLT-D-LQAAKRAGLAFI 128 (132)
T ss_pred CChHHHHHHHHHcCCCChhheEE-EcCCCcc-c-HHHHHHCCCeEE
Confidence 3678999999999 599999988 888 566 7 888888886543
No 375
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=46.99 E-value=19 Score=36.04 Aligned_cols=49 Identities=16% Similarity=0.261 Sum_probs=40.1
Q ss_pred chHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 789 LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 789 i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
+.+.+.++|+.|+++ |+.++++|+.+...+...++.+|+. ..||.++++
T Consensus 78 ~~~~~~~~L~~l~~~----~~~~~i~Sn~~~~~~~~~l~~~~~~-~~f~~i~~~ 126 (176)
T PF13419_consen 78 PYPGVRELLERLKAK----GIPLVIVSNGSRERIERVLERLGLD-DYFDEIISS 126 (176)
T ss_dssp ESTTHHHHHHHHHHT----TSEEEEEESSEHHHHHHHHHHTTHG-GGCSEEEEG
T ss_pred hhhhhhhhhhhcccc----cceeEEeecCCcccccccccccccc-ccccccccc
Confidence 345788999999876 8999999999999999999999984 236666664
No 376
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=46.87 E-value=15 Score=39.17 Aligned_cols=39 Identities=8% Similarity=0.025 Sum_probs=32.5
Q ss_pred chHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 789 LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 789 i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
+.+...+.|+.++++ |+.++|+||-....+.++++.++.
T Consensus 71 l~pg~~e~l~~l~~~----g~~~~IvS~~~~~~i~~il~~~~~ 109 (214)
T TIGR03333 71 IREGFREFVAFINEH----GIPFYVISGGMDFFVYPLLEGIVE 109 (214)
T ss_pred ccccHHHHHHHHHHC----CCeEEEECCCcHHHHHHHHHhhCC
Confidence 455778888999876 899999999999999999988743
No 377
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=45.48 E-value=59 Score=35.38 Aligned_cols=49 Identities=14% Similarity=0.162 Sum_probs=32.5
Q ss_pred hHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEe
Q 001541 790 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFIC 841 (1057)
Q Consensus 790 ~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~ 841 (1057)
.+..+++++.+.++ ..|+.++|.|-=.-..+..+|+..|+. ..++-+++
T Consensus 73 ~pgm~~~l~~l~~~--~~~~~~~IiSDaNs~fI~~iL~~~gl~-~~f~~I~T 121 (234)
T PF06888_consen 73 DPGMKELLRFLAKN--QRGFDLIIISDANSFFIETILEHHGLR-DCFSEIFT 121 (234)
T ss_pred CccHHHHHHHHHhc--CCCceEEEEeCCcHhHHHHHHHhCCCc-cccceEEe
Confidence 34455666666432 147888888888888899999998884 22344444
No 378
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=45.08 E-value=26 Score=37.19 Aligned_cols=48 Identities=13% Similarity=0.016 Sum_probs=38.6
Q ss_pred hHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 790 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 790 ~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
-+.+.++|+.|+++ |+.++|+|+.+...+...++.+++. .-||.++|+
T Consensus 96 ~~g~~~~L~~L~~~----g~~~~i~Tn~~~~~~~~~l~~~~l~-~~f~~i~~~ 143 (221)
T TIGR02253 96 YPGVRDTLMELRES----GYRLGIITDGLPVKQWEKLERLGVR-DFFDAVITS 143 (221)
T ss_pred CCCHHHHHHHHHHC----CCEEEEEeCCchHHHHHHHHhCChH-HhccEEEEe
Confidence 44778999999986 8999999999988889999999984 235666664
No 379
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=45.00 E-value=27 Score=35.57 Aligned_cols=72 Identities=14% Similarity=0.145 Sum_probs=47.3
Q ss_pred HHHHHHHHhcCcEE-EEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEe
Q 001541 928 ELRKVLRIQALRCH-VIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 1003 (1057)
Q Consensus 928 el~~~l~~~~~~~~-v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAM 1003 (1057)
.+.+.+...+..+. +++|... .-+-....--|...+.++++++|+++++++. +||+.+ | +++-+.+|+..+.
T Consensus 73 ~~~~~l~~~gl~fd~ii~~~~~-~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~-IGD~~~-D-i~~A~~aGi~~i~ 145 (161)
T TIGR01261 73 LMLQIFRSQGIIFDDVLICPHF-PDDNCDCRKPKIKLLEPYLKKNLIDKARSYV-IGDRET-D-MQLAENLGIRGIQ 145 (161)
T ss_pred HHHHHHHHCCCceeEEEECCCC-CCCCCCCCCCCHHHHHHHHHHcCCCHHHeEE-EeCCHH-H-HHHHHHCCCeEEE
Confidence 44555666665543 3333100 0011222234678899999999999999988 888887 8 9999999877654
No 380
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=43.36 E-value=34 Score=36.45 Aligned_cols=48 Identities=15% Similarity=0.218 Sum_probs=39.3
Q ss_pred hHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 790 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 790 ~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
-+.+.++|+.++++ |+.++|+|+.+...+..+++.+++. .-|+.++|+
T Consensus 94 ~~g~~~~l~~l~~~----g~~~~i~S~~~~~~~~~~l~~~~l~-~~f~~~~~~ 141 (222)
T PRK10826 94 LPGVREALALCKAQ----GLKIGLASASPLHMLEAVLTMFDLR-DYFDALASA 141 (222)
T ss_pred CCCHHHHHHHHHHC----CCeEEEEeCCcHHHHHHHHHhCcch-hcccEEEEc
Confidence 45778899999986 8999999999999999999999984 235666654
No 381
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=43.36 E-value=33 Score=37.45 Aligned_cols=48 Identities=10% Similarity=-0.004 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 791 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 791 ~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
+.+.+.|+.|+++ |+.++|+||.+...+..+++.+++...-+|.+||+
T Consensus 102 pg~~e~L~~L~~~----g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~ 149 (253)
T TIGR01422 102 PGVIEVIAYLRAR----GIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTT 149 (253)
T ss_pred CCHHHHHHHHHHC----CCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEcc
Confidence 4667888999886 89999999999999999999888742112666664
No 382
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=42.83 E-value=1.4e+02 Score=33.32 Aligned_cols=69 Identities=12% Similarity=0.060 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCC---CCCCCHHHHHHHHcCCcEEEcC
Q 001541 528 SVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF---IEPFGLTLIEAAAHGLPIVATK 598 (1057)
Q Consensus 528 ~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~---~Egfgl~~lEAmA~G~PVVat~ 598 (1057)
.....+.+.+.++++. +....--+.+++...++......|++++++. ...+...+..+..+++||+++.
T Consensus 147 ~~~~~~~~~a~~~g~~--l~~~~v~~~~~~~~~~~~l~~~~da~~~~~~~~~~~~~~~i~~~~~~~~iPv~~~~ 218 (294)
T PF04392_consen 147 AQIEQLRKAAKKLGIE--LVEIPVPSSEDLEQALEALAEKVDALYLLPDNLVDSNFEAILQLANEAKIPVFGSS 218 (294)
T ss_dssp HHHHHHHHHHHHTT-E--EEEEEESSGGGHHHHHHHHCTT-SEEEE-S-HHHHHTHHHHHHHCCCTT--EEESS
T ss_pred HHHHHHHHHHHHcCCE--EEEEecCcHhHHHHHHHHhhccCCEEEEECCcchHhHHHHHHHHHHhcCCCEEECC
Confidence 4567788888888874 3322333467899988888778898888752 2233344455666799999975
No 383
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=42.68 E-value=86 Score=41.67 Aligned_cols=41 Identities=15% Similarity=0.059 Sum_probs=34.5
Q ss_pred CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 787 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 787 ~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
.++.+..-+.|.+|+++ ||++=+.||=-.+.+..+.-++++
T Consensus 650 DkLQdgVPetI~~L~~A----GIKIWVLTGDK~ETAiNIg~sC~L 690 (1151)
T KOG0206|consen 650 DKLQDGVPETIAKLAQA----GIKIWVLTGDKQETAINIGYSCRL 690 (1151)
T ss_pred chhccCchHHHHHHHHc----CCEEEEEcCcHHHHHHHHHHhhcC
Confidence 34556666888889987 999999999999999999888877
No 384
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=41.89 E-value=43 Score=35.51 Aligned_cols=47 Identities=13% Similarity=0.134 Sum_probs=37.8
Q ss_pred hHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEe
Q 001541 790 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFIC 841 (1057)
Q Consensus 790 ~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~ 841 (1057)
-+...++|+.+++. |+.++|+||.....+..+++.+++. ..++.++|
T Consensus 95 ~~g~~~~l~~l~~~----g~~~~i~S~~~~~~~~~~l~~~~l~-~~f~~~~~ 141 (226)
T PRK13222 95 YPGVKETLAALKAA----GYPLAVVTNKPTPFVAPLLEALGIA-DYFSVVIG 141 (226)
T ss_pred CCCHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHcCCc-cCccEEEc
Confidence 45778899999886 8999999999999999999999984 23455544
No 385
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=41.87 E-value=16 Score=38.51 Aligned_cols=41 Identities=15% Similarity=0.125 Sum_probs=35.5
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 1002 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVA 1002 (1057)
-+...+..+++++|++++++++ +||+.+ | +.+-..+|..++
T Consensus 132 P~~~~~~~~~~~~~~~~~~~l~-igD~~~-D-i~aA~~~Gi~~i 172 (205)
T TIGR01454 132 PAPDIVREALRLLDVPPEDAVM-VGDAVT-D-LASARAAGTATV 172 (205)
T ss_pred CChHHHHHHHHHcCCChhheEE-EcCCHH-H-HHHHHHcCCeEE
Confidence 3678899999999999999988 888887 8 999999997654
No 386
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=41.61 E-value=36 Score=37.63 Aligned_cols=48 Identities=8% Similarity=0.169 Sum_probs=39.9
Q ss_pred hHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 790 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 790 ~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
-+.+.+.|+.|++. |+.++|+|+.+...+..+++.+++. .-||.++++
T Consensus 111 ~pg~~e~L~~L~~~----g~~l~I~Tn~~~~~~~~~l~~~gl~-~~Fd~ii~~ 158 (260)
T PLN03243 111 RPGSREFVQALKKH----EIPIAVASTRPRRYLERAIEAVGME-GFFSVVLAA 158 (260)
T ss_pred CCCHHHHHHHHHHC----CCEEEEEeCcCHHHHHHHHHHcCCH-hhCcEEEec
Confidence 34678899999886 8999999999999999999999984 236777774
No 387
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=40.90 E-value=36 Score=33.88 Aligned_cols=42 Identities=19% Similarity=0.207 Sum_probs=34.1
Q ss_pred CCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 001541 958 ASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 1002 (1057)
Q Consensus 958 asKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVA 1002 (1057)
=-+...+.++++++|+++++++. +||+.. | ++.=+.+|+..+
T Consensus 101 KP~~~~~~~~~~~~~~~~~e~i~-IGDs~~-D-i~~A~~~Gi~~v 142 (147)
T TIGR01656 101 KPKPGLILEALKRLGVDASRSLV-VGDRLR-D-LQAARNAGLAAV 142 (147)
T ss_pred CCCHHHHHHHHHHcCCChHHEEE-EcCCHH-H-HHHHHHCCCCEE
Confidence 34778899999999999999988 888866 7 777777776544
No 388
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=40.49 E-value=25 Score=34.33 Aligned_cols=37 Identities=22% Similarity=0.273 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEe
Q 001541 960 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 1003 (1057)
Q Consensus 960 Kg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAM 1003 (1057)
|..-|+.|-+ +-+.+++ +||+.| | +-||..+.+||+.
T Consensus 82 K~~ii~eLkk----~~~k~vm-VGnGaN-D-~laLr~ADlGI~t 118 (152)
T COG4087 82 KAKIIRELKK----RYEKVVM-VGNGAN-D-ILALREADLGICT 118 (152)
T ss_pred HHHHHHHhcC----CCcEEEE-ecCCcc-h-HHHhhhcccceEE
Confidence 5555554433 3345666 999999 9 9999999999754
No 389
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=40.32 E-value=39 Score=35.25 Aligned_cols=47 Identities=13% Similarity=0.176 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 791 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 791 ~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
+.+.++|++|+++ |+.++|+|+-+...+...++.+|+. .-||.++++
T Consensus 95 ~~~~~~L~~L~~~----g~~~~i~Sn~~~~~~~~~l~~~gl~-~~fd~i~~s 141 (198)
T TIGR01428 95 PDVPAGLRALKER----GYRLAILSNGSPAMLKSLVKHAGLD-DPFDAVLSA 141 (198)
T ss_pred CCHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHCCCh-hhhheeEeh
Confidence 4667889999986 8999999999999999999999983 235666664
No 390
>PHA02597 30.2 hypothetical protein; Provisional
Probab=39.57 E-value=14 Score=38.51 Aligned_cols=39 Identities=13% Similarity=0.110 Sum_probs=29.5
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCc--ceEEE
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGV--HKTVI 1002 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~a--g~gVA 1002 (1057)
.|...+.++++++| +++++. +||+-+ | +..=..+ |..++
T Consensus 131 ~kp~~~~~a~~~~~--~~~~v~-vgDs~~-d-i~aA~~a~~Gi~~i 171 (197)
T PHA02597 131 SKEKLFIKAKEKYG--DRVVCF-VDDLAH-N-LDAAHEALSQLPVI 171 (197)
T ss_pred ccHHHHHHHHHHhC--CCcEEE-eCCCHH-H-HHHHHHHHcCCcEE
Confidence 36789999999999 455544 999999 8 7777777 86543
No 391
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=38.35 E-value=33 Score=38.42 Aligned_cols=62 Identities=10% Similarity=0.033 Sum_probs=41.2
Q ss_pred CcceEEEEEecCCCC--CcchHHHHHHHHHHHhhhcCCCeEEEEEC-CC-CHH--HHHHHHHhCCCCC
Q 001541 772 RRKHIFVISVDCDST--TGLLDATKKICEAVEKERTEGSIGFILST-SM-TIS--EIHSFLVSGHLSP 833 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL~--~~i~~~t~~al~~l~~~~~~~gi~~vIaT-GR-~~~--~i~~~l~~lgl~~ 833 (1057)
...--|+|||||.|- +.+-+...+|++.|..++.+-.|.|++.| |= ..+ -++++-..||+.+
T Consensus 33 ~~~fgfafDIDGVL~RG~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~V 100 (389)
T KOG1618|consen 33 PPTFGFAFDIDGVLFRGHRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVEV 100 (389)
T ss_pred CCceeEEEecccEEEecCCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCcc
Confidence 345578999999993 55666888999999887433356777776 22 222 2445666677653
No 392
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=38.35 E-value=39 Score=39.51 Aligned_cols=47 Identities=9% Similarity=0.129 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 791 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 791 ~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
+.+++.|+.|+++ |+.++|+|+.+...+..+++.+|+. .-||.+||.
T Consensus 219 pGa~ElL~~Lk~~----GiklaIaSn~~~~~~~~~L~~lgL~-~yFd~Iv~s 265 (381)
T PLN02575 219 TGSQEFVNVLMNY----KIPMALVSTRPRKTLENAIGSIGIR-GFFSVIVAA 265 (381)
T ss_pred cCHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHcCCH-HHceEEEec
Confidence 4668889999886 8999999999999999999999984 246777764
No 393
>cd07944 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase-like, N-terminal catalytic TIM barrel domain. This family of bacterial enzymes is sequence-similar to 4-hydroxy-2-oxovalerate aldolase (HOA) but its exact function is unknown. This family includes the Bacteroides vulgatus Bvu_2661 protein and belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues t
Probab=37.76 E-value=6e+02 Score=28.12 Aligned_cols=125 Identities=14% Similarity=0.084 Sum_probs=77.5
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE--EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEe---CCCCCCCcHHHH
Q 001541 486 PKKNITTLVKAFGECRPLRELANLTL--IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY---PKHHKQSDVPEI 560 (1057)
Q Consensus 486 ~~Kgi~~Ll~A~~~l~~~~~~~~l~L--IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f---~g~v~~~dl~~l 560 (1057)
+.+.++.++++++..++.. ..+.+ ....+. ..+++.++.+.+.+++. ..+.+ .|...++++..+
T Consensus 104 ~~~~~~~~~~~i~~ak~~G--~~v~~~~~~a~~~--------~~~~~~~~~~~~~~~g~-~~i~l~DT~G~~~P~~v~~l 172 (266)
T cd07944 104 HKHEFDEALPLIKAIKEKG--YEVFFNLMAISGY--------SDEELLELLELVNEIKP-DVFYIVDSFGSMYPEDIKRI 172 (266)
T ss_pred ccccHHHHHHHHHHHHHCC--CeEEEEEEeecCC--------CHHHHHHHHHHHHhCCC-CEEEEecCCCCCCHHHHHHH
Confidence 4467888888888886532 22322 112221 23445556666666664 34665 577778889888
Q ss_pred HHHhhcCCc--EEEEcCCCCCCCHH---HHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHH
Q 001541 561 YRLAAKTKG--VFINPAFIEPFGLT---LIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKL 630 (1057)
Q Consensus 561 y~~Aa~~~d--v~v~ps~~Egfgl~---~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~l 630 (1057)
++...+..+ +-|---.+..+|+. .++|+.+|.=+|-+..+|+.+- .|- -..++++..+...
T Consensus 173 v~~l~~~~~~~~~i~~H~Hn~~Gla~AN~laA~~aGa~~vd~s~~G~G~~-----aGN----~~~E~~v~~l~~~ 238 (266)
T cd07944 173 ISLLRSNLDKDIKLGFHAHNNLQLALANTLEAIELGVEIIDATVYGMGRG-----AGN----LPTELLLDYLNNK 238 (266)
T ss_pred HHHHHHhcCCCceEEEEeCCCccHHHHHHHHHHHcCCCEEEEecccCCCC-----cCc----HHHHHHHHHHHHh
Confidence 888754323 33333346777775 4788899999999988887662 121 1456777777655
No 394
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=37.72 E-value=18 Score=38.41 Aligned_cols=40 Identities=13% Similarity=0.091 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHhCCC-cccEEEEecCCCCCCccccccCcceEEE
Q 001541 960 RSQALRYLYLRWGVE-LSKMVVFVGESGDTDYEGLLGGVHKTVI 1002 (1057)
Q Consensus 960 Kg~AL~~L~~~lgI~-~e~viaf~GD~~n~D~~eML~~ag~gVA 1002 (1057)
+...+.++++++|++ ++++++ +||+.. | +.+=+.+|..++
T Consensus 147 ~p~~~~~a~~~~~~~~~~~~~~-igD~~~-D-i~aa~~aG~~~~ 187 (220)
T TIGR03351 147 APDLILRAMELTGVQDVQSVAV-AGDTPN-D-LEAGINAGAGAV 187 (220)
T ss_pred CHHHHHHHHHHcCCCChhHeEE-eCCCHH-H-HHHHHHCCCCeE
Confidence 678999999999997 789988 888887 9 999999999873
No 395
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=36.84 E-value=48 Score=36.55 Aligned_cols=48 Identities=10% Similarity=0.029 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 791 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 791 ~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
+.+.++|+.|+++ |+.++|+||.+...+..+++.+++....+|.++|.
T Consensus 104 pg~~elL~~L~~~----g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~ 151 (267)
T PRK13478 104 PGVLEVIAALRAR----GIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTT 151 (267)
T ss_pred CCHHHHHHHHHHC----CCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcC
Confidence 4667888999886 89999999999999998988776521113556554
No 396
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=36.57 E-value=25 Score=38.12 Aligned_cols=29 Identities=14% Similarity=0.122 Sum_probs=0.0
Q ss_pred CcceEEEEEecCCC---CCcchHHHHHHHHHH
Q 001541 772 RRKHIFVISVDCDS---TTGLLDATKKICEAV 800 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL---~~~i~~~t~~al~~l 800 (1057)
...|.|+||+|||| ...+....+++++.+
T Consensus 8 ~~~k~iiFDlDGTL~D~~~~~~~a~~~~~~~~ 39 (238)
T PRK10748 8 GRISALTFDLDDTLYDNRPVILRTEQEALAFV 39 (238)
T ss_pred CCceeEEEcCcccccCChHHHHHHHHHHHHHH
No 397
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=36.25 E-value=37 Score=34.74 Aligned_cols=45 Identities=22% Similarity=0.282 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEe
Q 001541 790 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFIC 841 (1057)
Q Consensus 790 ~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~ 841 (1057)
-+.+.+.|+.|+++ |+.++|+|+. ..+...++.+++. .-||.+++
T Consensus 90 ~~g~~~~l~~l~~~----g~~i~i~S~~--~~~~~~l~~~~l~-~~f~~v~~ 134 (185)
T TIGR02009 90 LPGIENFLKRLKKK----GIAVGLGSSS--KNADRILAKLGLT-DYFDAIVD 134 (185)
T ss_pred CcCHHHHHHHHHHc----CCeEEEEeCc--hhHHHHHHHcChH-HHCCEeee
Confidence 45677889999886 8999999998 6678889998874 12565655
No 398
>PRK09449 dUMP phosphatase; Provisional
Probab=35.94 E-value=29 Score=37.01 Aligned_cols=41 Identities=15% Similarity=0.024 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhCCCc-ccEEEEecCCC-CCCccccccCcceEEEe
Q 001541 960 RSQALRYLYLRWGVEL-SKMVVFVGESG-DTDYEGLLGGVHKTVIL 1003 (1057)
Q Consensus 960 Kg~AL~~L~~~lgI~~-e~viaf~GD~~-n~D~~eML~~ag~gVAM 1003 (1057)
+-..+.++++++|+.+ ++++. +||+. + | +..=..+|...+.
T Consensus 152 ~p~~~~~~~~~~~~~~~~~~~~-vgD~~~~-D-i~~A~~aG~~~i~ 194 (224)
T PRK09449 152 DVAIFDYALEQMGNPDRSRVLM-VGDNLHS-D-ILGGINAGIDTCW 194 (224)
T ss_pred CHHHHHHHHHHcCCCCcccEEE-EcCCcHH-H-HHHHHHCCCcEEE
Confidence 4567899999999855 67766 88886 5 6 8887788876444
No 399
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=35.54 E-value=25 Score=37.73 Aligned_cols=43 Identities=19% Similarity=0.159 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcc---eEEEeCC
Q 001541 960 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVH---KTVILKG 1005 (1057)
Q Consensus 960 Kg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag---~gVAMgN 1005 (1057)
.-..+.++++.+|+++++++. +||+.+ | +.|=+.|| .+|..|.
T Consensus 147 ~P~~l~~~~~~~~~~~~~~l~-VGDs~~-D-i~aA~~Ag~~~v~v~~g~ 192 (220)
T COG0546 147 DPEPLLLLLEKLGLDPEEALM-VGDSLN-D-ILAAKAAGVPAVGVTWGY 192 (220)
T ss_pred CHHHHHHHHHHhCCChhheEE-ECCCHH-H-HHHHHHcCCCEEEEECCC
Confidence 567888999999999767777 999999 9 99999998 4556654
No 400
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=35.22 E-value=49 Score=34.97 Aligned_cols=37 Identities=22% Similarity=0.308 Sum_probs=28.5
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCC
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQV 220 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~ 220 (1057)
|||++.+-.|+ ....+..|+++|.+.| |+|.|+++..
T Consensus 1 M~ILlTNDDGi----------------~a~Gi~aL~~~L~~~g--~~V~VvAP~~ 37 (196)
T PF01975_consen 1 MRILLTNDDGI----------------DAPGIRALAKALSALG--HDVVVVAPDS 37 (196)
T ss_dssp SEEEEE-SS-T----------------TSHHHHHHHHHHTTTS--SEEEEEEESS
T ss_pred CeEEEEcCCCC----------------CCHHHHHHHHHHHhcC--CeEEEEeCCC
Confidence 89999987775 2335678999998888 9999999875
No 401
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=35.14 E-value=23 Score=37.88 Aligned_cols=38 Identities=11% Similarity=0.114 Sum_probs=30.9
Q ss_pred chHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 789 LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 789 i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
+.+.+.+.|+.++++ |+.++|+||-....+..+++.+ +
T Consensus 75 l~pG~~e~l~~l~~~----g~~~~IvS~~~~~~i~~il~~~-~ 112 (219)
T PRK09552 75 IREGFHEFVQFVKEN----NIPFYVVSGGMDFFVYPLLQGL-I 112 (219)
T ss_pred cCcCHHHHHHHHHHc----CCeEEEECCCcHHHHHHHHHHh-C
Confidence 345677888888876 8889999999888888888887 6
No 402
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=34.99 E-value=52 Score=36.67 Aligned_cols=47 Identities=17% Similarity=0.210 Sum_probs=37.9
Q ss_pred hHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEe
Q 001541 790 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFIC 841 (1057)
Q Consensus 790 ~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~ 841 (1057)
-+.+.+.|+.|+++ |+.++|+|+.+...+..+++.+|+. ..|+.+++
T Consensus 144 ~pg~~e~L~~L~~~----gi~laIvSn~~~~~~~~~L~~~gl~-~~F~~vi~ 190 (273)
T PRK13225 144 FPGVADLLAQLRSR----SLCLGILSSNSRQNIEAFLQRQGLR-SLFSVVQA 190 (273)
T ss_pred CCCHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHcCCh-hheEEEEe
Confidence 45778999999886 8999999999999999999999984 23444443
No 403
>KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones]
Probab=34.91 E-value=2.3e+02 Score=30.27 Aligned_cols=54 Identities=30% Similarity=0.386 Sum_probs=33.2
Q ss_pred HHHHHHcCCcEEEcCCCCch-hhhhc-CCceEEeCCCCHHHHHHHHHHHHhCHHHHHH
Q 001541 584 LIEAAAHGLPIVATKNGGPV-DIHRV-LDNGLLVDPHDQQSVADALLKLVADKQLWAR 639 (1057)
Q Consensus 584 ~lEAmA~G~PVVat~~Gg~~-eiv~~-~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~ 639 (1057)
+++-.-.-.||+..+.|+.. ....+ ...-+-|+|++--+||-||+- ++.+++++
T Consensus 178 ~L~d~l~ssPii~ge~g~a~~~~~a~g~~f~fgvdp~~DPELAlALRl--SMEEer~r 233 (259)
T KOG2884|consen 178 LLSDALLSSPIIQGEDGGAAAGLGANGMDFEFGVDPEDDPELALALRL--SMEEERAR 233 (259)
T ss_pred cHHHHhhcCceeccCcccccccccccccccccCCCcccCHHHHHHHHh--hHHHHHHH
Confidence 55556667899988755432 22211 123356788888899999984 44444443
No 404
>PF03308 ArgK: ArgK protein; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components. In Escherichia coli, the arginine-ornithine transport system requires an arginine-ornithine-binding protein and the lysine-arginine-ornithine (LAO) transport system includes a LAO-binding protein. Both periplasmic proteins can be phosphorylated by a single kinase, ArgK [] resulting in reduced levels of transport activity of the periplasmic transport systems that include each of the binding proteins. The ArgK protein acts as an ATPase enzyme and as a kinase.; PDB: 3MD0_A 3P32_A 2QM7_A 2QM8_A 2WWW_D 2P67_A 3NXS_A.
Probab=34.90 E-value=4.3e+02 Score=29.27 Aligned_cols=119 Identities=17% Similarity=0.191 Sum_probs=68.5
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCc-cCCcccccCCCCCCccccccCCCCCeEEEEccCCCcccc
Q 001541 189 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWS-YGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKY 267 (1057)
Q Consensus 189 d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~-y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~ 267 (1057)
..-|=.+.+-.|++.|.+.| ++|-|++-.+++|..... -|..+.| .+....++++|..++....
T Consensus 38 PGaGKSTli~~l~~~~~~~g--~~VaVlAVDPSSp~tGGAlLGDRiRM----------~~~~~d~~vfIRS~atRG~--- 102 (266)
T PF03308_consen 38 PGAGKSTLIDALIRELRERG--KRVAVLAVDPSSPFTGGALLGDRIRM----------QELSRDPGVFIRSMATRGS--- 102 (266)
T ss_dssp TTSSHHHHHHHHHHHHHHTT----EEEEEE-GGGGCC---SS--GGGC----------HHHHTSTTEEEEEE---SS---
T ss_pred CCCcHHHHHHHHHHHHhhcC--CceEEEEECCCCCCCCCcccccHHHh----------cCcCCCCCEEEeecCcCCC---
Confidence 34488899999999999999 999999988765532211 1222222 2234457899988876332
Q ss_pred cccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchh
Q 001541 268 IAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRD 342 (1057)
Q Consensus 268 l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~ 342 (1057)
+-.... ......+.+.. .-||+|.....-.|..-.-++....+-+++..=+.+.+
T Consensus 103 ---------lGGls~----~t~~~v~ll~a-------aG~D~IiiETVGvGQsE~~I~~~aD~~v~v~~Pg~GD~ 157 (266)
T PF03308_consen 103 ---------LGGLSR----ATRDAVRLLDA-------AGFDVIIIETVGVGQSEVDIADMADTVVLVLVPGLGDE 157 (266)
T ss_dssp ---------HHHHHH----HHHHHHHHHHH-------TT-SEEEEEEESSSTHHHHHHTTSSEEEEEEESSTCCC
T ss_pred ---------CCCccH----hHHHHHHHHHH-------cCCCEEEEeCCCCCccHHHHHHhcCeEEEEecCCCccH
Confidence 222222 22222222222 45999999988777777777777777776666666543
No 405
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=34.71 E-value=2.4e+02 Score=32.29 Aligned_cols=102 Identities=15% Similarity=0.095 Sum_probs=57.9
Q ss_pred cEEEEEeCCCCCCCH--HHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCC
Q 001541 476 PVILALARPDPKKNI--TTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHK 553 (1057)
Q Consensus 476 ~~Il~vGRl~~~Kgi--~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~ 553 (1057)
.+++..|.-.+.|.. +...+.+..+.. ....+ +++|+..+. + ......+.+..+-...+.+.|..+
T Consensus 183 ~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~--~~~~i-vl~g~p~~~-e--------~~~~~~i~~~~~~~~~~~l~g~~s 250 (344)
T TIGR02201 183 YIVIQPTSRWFFKCWDNDRFSALIDALHA--RGYEV-VLTSGPDKD-E--------LAMVNEIAQGCQTPRVTSLAGKLT 250 (344)
T ss_pred EEEEeCCCCccccCCCHHHHHHHHHHHHh--CCCeE-EEecCCCHH-H--------HHHHHHHHhhCCCCcccccCCCCC
Confidence 455666665555644 345555555532 22333 455643210 0 111222233333223455788888
Q ss_pred CCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcC
Q 001541 554 QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK 598 (1057)
Q Consensus 554 ~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~ 598 (1057)
-.++.++++.| +++|-.. + -.+-=|.|.|+|+|+-.
T Consensus 251 L~el~ali~~a----~l~Vs~D---S--Gp~HlAaA~g~p~v~Lf 286 (344)
T TIGR02201 251 LPQLAALIDHA----RLFIGVD---S--VPMHMAAALGTPLVALF 286 (344)
T ss_pred HHHHHHHHHhC----CEEEecC---C--HHHHHHHHcCCCEEEEE
Confidence 89999999999 8988652 2 23444788999999843
No 406
>PRK13015 3-dehydroquinate dehydratase; Reviewed
Probab=34.41 E-value=1e+02 Score=30.81 Aligned_cols=117 Identities=18% Similarity=0.250 Sum_probs=71.4
Q ss_pred EecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcC-CcEEEEcCCCCCCCHHHHHHHHc-
Q 001541 513 MGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKT-KGVFINPAFIEPFGLTLIEAAAH- 590 (1057)
Q Consensus 513 vG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~-~dv~v~ps~~Egfgl~~lEAmA~- 590 (1057)
+|.++.--.-...-+++...+.+.+..+++ .+.|.-+=..-++.+.++.|... -.+.++|.-+--.+..+..|++.
T Consensus 15 LG~REp~iYG~~tl~~i~~~~~~~a~~~g~--~~~~~QSN~EGelId~i~~a~~~~dgiIINpga~THtSiAl~DAl~~~ 92 (146)
T PRK13015 15 LGTREPAIYGHETLADVEALCRAAAEALGL--EVEFRQSNHEGELIDWIHEARGDVAGIVINPGAYTHTSVAIRDALAAL 92 (146)
T ss_pred cCCCCCCcCCCCCHHHHHHHHHHHHHHcCC--EEEEEeeCcHHHHHHHHHHhhhcCCEEEEcchHHhhhHHHHHHHHHcC
Confidence 355543222223345566777777777776 46665554455788888777433 25888898777788999999877
Q ss_pred CCcEEEcC--CCCchh------hhhcCCceEEeCCCCHHHHHHHHHHHHh
Q 001541 591 GLPIVATK--NGGPVD------IHRVLDNGLLVDPHDQQSVADALLKLVA 632 (1057)
Q Consensus 591 G~PVVat~--~Gg~~e------iv~~~~~Gllv~p~d~~~la~aI~~ll~ 632 (1057)
++|+|=-- +--.+| ++..-..|.+.- .-.+...-||..+++
T Consensus 93 ~~P~VEVHiSNi~aRE~fR~~S~is~~~~G~I~G-~G~~gY~lAl~al~~ 141 (146)
T PRK13015 93 ELPVIEVHISNVHAREAFRHHSYVSAIADGVICG-LGTEGYRLALRRLAT 141 (146)
T ss_pred CCCEEEEEcCCccccccccccccccCceeEEEee-CCHHHHHHHHHHHHH
Confidence 99997522 111223 333444566653 356677777766653
No 407
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=34.30 E-value=60 Score=32.98 Aligned_cols=47 Identities=19% Similarity=0.186 Sum_probs=35.8
Q ss_pred hHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 790 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 790 ~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
-+.+.++|++|++. |+.++|+|+-+... ...+..+++. ..||.+|++
T Consensus 87 ~~g~~~~l~~l~~~----g~~~~i~Tn~~~~~-~~~~~~~~l~-~~f~~i~~~ 133 (183)
T TIGR01509 87 LPGVEPLLEALRAR----GKKLALLTNSPRDH-AVLVQELGLR-DLFDVVIFS 133 (183)
T ss_pred CcCHHHHHHHHHHC----CCeEEEEeCCchHH-HHHHHhcCCH-HHCCEEEEc
Confidence 45778899999886 89999999998887 5566557874 236777774
No 408
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=33.81 E-value=58 Score=36.44 Aligned_cols=52 Identities=19% Similarity=0.268 Sum_probs=35.5
Q ss_pred HHHHHHHHhCCCcccEEEEecCCCCCCccccccCcce-EEEeCCCchhhhhhhhh
Q 001541 963 ALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHK-TVILKGICSSSSNQIHA 1016 (1057)
Q Consensus 963 AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~-gVAMgNa~~~~~~~~~a 1016 (1057)
-..+|.++++|+++.++. +||.-||| +-.=+.+|. ++.|--++...+..+.+
T Consensus 229 m~~~l~~~~~i~psRt~m-vGDRL~TD-IlFG~~~G~~TLLvltGv~~led~~~~ 281 (306)
T KOG2882|consen 229 MFEYLLEKFNIDPSRTCM-VGDRLDTD-ILFGKNCGFKTLLVLSGVTTLEDILEA 281 (306)
T ss_pred HHHHHHHHcCCCcceEEE-Ecccchhh-hhHhhccCcceEEEecCcCcHHHHHhc
Confidence 356789999999999988 99999988 433334553 46666666444444444
No 409
>PRK06091 membrane protein FdrA; Validated
Probab=33.75 E-value=6.4e+02 Score=31.08 Aligned_cols=88 Identities=19% Similarity=0.111 Sum_probs=52.9
Q ss_pred CCCCHHHHHHH-HcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhh-cCCHHH
Q 001541 578 EPFGLTLIEAA-AHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIH-LFSWPE 655 (1057)
Q Consensus 578 Egfgl~~lEAm-A~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~-~fsw~~ 655 (1057)
|++.-.+++++ .+++|||+-..|....-- ...|++. ..+.+++++....+..-+........-..++++ .|+=-.
T Consensus 265 E~v~~~fl~aar~~~KPVVvlk~Grs~~g~--~q~GVi~-a~tleEl~~~A~~la~~~~~~~~~~~~~~~~irGly~GGT 341 (555)
T PRK06091 265 EAVRLKIINAMKATGKPVVALFLGYTPAVA--RDENVWF-ASTLDEAARLACLLSRVTAQRNAILPVSQGFICGLYTGGT 341 (555)
T ss_pred hHHHHHHHHHHhhCCCCEEEEEecCCchhh--hcCCeEE-eCCHHHHHHHHHHHhcccccccccccccCCeeEEEecCch
Confidence 55555666654 459999999988765332 2345443 248888887776655433322222233344565 788888
Q ss_pred HHHHHHHHHHccc
Q 001541 656 HCKTYLSRIAGCK 668 (1057)
Q Consensus 656 ~a~~~l~~~~~~~ 668 (1057)
.|.+-.-++....
T Consensus 342 L~~Ea~~~~~~~~ 354 (555)
T PRK06091 342 LAAEAAGLLAGHL 354 (555)
T ss_pred HHHHHHHHHHhcC
Confidence 8887773434443
No 410
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=33.60 E-value=62 Score=34.80 Aligned_cols=48 Identities=10% Similarity=0.014 Sum_probs=37.7
Q ss_pred hHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 790 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 790 ~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
-+.+.+.|+.|+++ |+.++|+|+.+...+..+++.+++. ..|+.++|.
T Consensus 97 ~pg~~~~L~~L~~~----g~~l~i~Tn~~~~~~~~~l~~~~l~-~~f~~i~~~ 144 (229)
T PRK13226 97 FDGVEGMLQRLECA----GCVWGIVTNKPEYLARLILPQLGWE-QRCAVLIGG 144 (229)
T ss_pred CCCHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCch-hcccEEEec
Confidence 34667888899886 8999999999999888899999884 235666653
No 411
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=33.23 E-value=54 Score=36.45 Aligned_cols=48 Identities=13% Similarity=0.122 Sum_probs=37.8
Q ss_pred hHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 790 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 790 ~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
-+.+.++|+.|+++ |+.++|+||.+...+...++.+++. ..|+.++|+
T Consensus 103 ~~g~~e~L~~Lk~~----g~~l~ivTn~~~~~~~~~l~~~~i~-~~f~~i~~~ 150 (272)
T PRK13223 103 YPGVRDTLKWLKKQ----GVEMALITNKPERFVAPLLDQMKIG-RYFRWIIGG 150 (272)
T ss_pred CCCHHHHHHHHHHC----CCeEEEEECCcHHHHHHHHHHcCcH-hhCeEEEec
Confidence 35677889999886 8999999999999999999998884 224555554
No 412
>COG1887 TagB Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane]
Probab=32.92 E-value=7.7e+02 Score=29.04 Aligned_cols=164 Identities=15% Similarity=0.134 Sum_probs=90.8
Q ss_pred CCCCCcEEEEEeCCCCCC--------CHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCC
Q 001541 471 TNPRKPVILALARPDPKK--------NITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDL 542 (1057)
Q Consensus 471 ~~~~~~~Il~vGRl~~~K--------gi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l 542 (1057)
.+.++++|+|.-...+.. ....-+.++.+. ....+.++|+=-.+.... .+. .....
T Consensus 204 ~~~~k~vIlyaPTfr~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~ii~k~Hp~is~----------~~~---~~~~~ 267 (388)
T COG1887 204 LPQDKKVILYAPTFRDNDVLIGTQFFNLDIDIEKLKEK---LGENEYVIIVKPHPLISD----------KID---KRYAL 267 (388)
T ss_pred CcccCceEEecCCccCCccccchhhhhhhhhHHHHHHh---hccCCeEEEEecChhhhh----------hhh---hhhhc
Confidence 345789999998887765 222223333333 222355566654443111 000 01011
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcC-CC--------CchhhhhcCCceE
Q 001541 543 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK-NG--------GPVDIHRVLDNGL 613 (1057)
Q Consensus 543 ~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~-~G--------g~~eiv~~~~~Gl 613 (1057)
.+.+...-. ..++.++|..+ |++| --++-+..|+|..-+||+.-. .+ -..+. ....-|-
T Consensus 268 ~~~~~~vs~--~~di~dll~~s----DiLI-----TDySSv~fdf~~l~KPiify~~D~~~y~~~rg~~~d~-~~~~Pg~ 335 (388)
T COG1887 268 DDFVLDVSD--NADINDLLLVS----DILI-----TDYSSVIFDFMLLDKPIIFYTYDLEQYDELRGFYLDY-KFEAPGE 335 (388)
T ss_pred cceeEeccc--chhHHHHHhhh----CEEE-----eechHHHHHHHHhcCcEEEEecChHHHHhhhhhhhhH-HhcCCcc
Confidence 122222222 47999999999 9988 357899999999999999853 21 11121 1223455
Q ss_pred EeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 001541 614 LVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRI 664 (1057)
Q Consensus 614 lv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~ 664 (1057)
++. +..++.++|.....+++...+..+.-.+.+..+.-....+++.+.+
T Consensus 336 ~~~--~~~~li~ai~~~~~~~~~~~~k~~~~~~~~~~~~dg~ss~ri~~~i 384 (388)
T COG1887 336 VVE--TQEELIDAIKPYDEDGNYDLEKLRVFNDKFNSYEDGRSSERILKLI 384 (388)
T ss_pred ccc--cHHHHHHHHHhhhcccchhHHHHHHHHHhhcccccccHHHHHHHHH
Confidence 655 7899999999888865544433333333332332244455555444
No 413
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=32.34 E-value=6.3e+02 Score=26.77 Aligned_cols=46 Identities=17% Similarity=0.231 Sum_probs=35.2
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcC
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK 598 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~ 598 (1057)
.........+..++..+++.| +++|-..++ .++=|+++|+|+|+-.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~----~~~Is~RlH-----~~I~a~~~g~P~i~i~ 283 (286)
T PF04230_consen 238 NVIIIDYSLSPDELLELISQA----DLVISMRLH-----GAILALSLGVPVIAIS 283 (286)
T ss_pred ceeEecCCCCHHHHHHHHhcC----CEEEecCCH-----HHHHHHHcCCCEEEEe
Confidence 345556677788999999999 888866543 4677899999999854
No 414
>PRK11590 hypothetical protein; Provisional
Probab=30.86 E-value=76 Score=33.69 Aligned_cols=47 Identities=6% Similarity=-0.049 Sum_probs=34.9
Q ss_pred HHHHHHHH-HHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCC
Q 001541 791 DATKKICE-AVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNS 843 (1057)
Q Consensus 791 ~~t~~al~-~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~n 843 (1057)
+...+.|+ .++++ |+.++|+|+.+...+.+++..+++. ..+.+||..
T Consensus 98 pga~e~L~~~l~~~----G~~l~IvSas~~~~~~~il~~l~~~--~~~~~i~t~ 145 (211)
T PRK11590 98 PVVQERLTTYLLSS----DADVWLITGSPQPLVEQVYFDTPWL--PRVNLIASQ 145 (211)
T ss_pred ccHHHHHHHHHHhC----CCEEEEEeCCcHHHHHHHHHHcccc--ccCceEEEE
Confidence 35667774 45554 8999999999999999999998851 135677743
No 415
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=30.66 E-value=50 Score=35.21 Aligned_cols=35 Identities=26% Similarity=0.340 Sum_probs=29.3
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCc
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGV 997 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~a 997 (1057)
-|+.-++-+|+.-+++.+ .++ +||+-. | .+||+.+
T Consensus 191 ~ka~i~e~~~ele~~d~s-a~~-VGDSIt-D-v~ml~~~ 225 (315)
T COG4030 191 EKAKIMEGYCELEGIDFS-AVV-VGDSIT-D-VKMLEAA 225 (315)
T ss_pred chhHHHHHHHhhcCCCcc-eeE-ecCccc-c-hHHHHHh
Confidence 477888889998888877 555 899998 9 9999877
No 416
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=30.08 E-value=7e+02 Score=27.73 Aligned_cols=110 Identities=18% Similarity=0.190 Sum_probs=66.1
Q ss_pred EEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEec---CCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCC
Q 001541 478 ILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGN---RDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQ 554 (1057)
Q Consensus 478 Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~---~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~ 554 (1057)
++.+..+---...+.+++.+.++++... . .+..|. +........-..+-+..+.+...++|+. .+.-.++.
T Consensus 28 ~~~iaGPCsie~~~~~~~~A~~lk~~g~--~-~~r~~~~kpRTs~~s~~G~g~~gl~~l~~~~~~~Gl~---~~te~~d~ 101 (266)
T PRK13398 28 KIIIAGPCAVESEEQMVKVAEKLKELGV--H-MLRGGAFKPRTSPYSFQGLGEEGLKILKEVGDKYNLP---VVTEVMDT 101 (266)
T ss_pred EEEEEeCCcCCCHHHHHHHHHHHHHcCC--C-EEEEeeecCCCCCCccCCcHHHHHHHHHHHHHHcCCC---EEEeeCCh
Confidence 4455555556678899999999876432 2 233341 1111111111233466678888888873 23344445
Q ss_pred CcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHc-CCcEEEcC
Q 001541 555 SDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH-GLPIVATK 598 (1057)
Q Consensus 555 ~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~-G~PVVat~ 598 (1057)
.++..+...+ |++-++|. +-.+..+++++|. |+||+.++
T Consensus 102 ~~~~~l~~~v----d~~kIga~-~~~n~~LL~~~a~~gkPV~lk~ 141 (266)
T PRK13398 102 RDVEEVADYA----DMLQIGSR-NMQNFELLKEVGKTKKPILLKR 141 (266)
T ss_pred hhHHHHHHhC----CEEEECcc-cccCHHHHHHHhcCCCcEEEeC
Confidence 6677776777 88888874 4556666666654 99998865
No 417
>TIGR01088 aroQ 3-dehydroquinate dehydratase, type II. This model specifies the type II enzyme. The type I enzyme, often found as part of a multifunctional protein, is described by TIGR01093.
Probab=29.44 E-value=1.4e+02 Score=29.67 Aligned_cols=116 Identities=20% Similarity=0.255 Sum_probs=70.2
Q ss_pred EecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcC-CcEEEEcCCCCCCCHHHHHHHHc-
Q 001541 513 MGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKT-KGVFINPAFIEPFGLTLIEAAAH- 590 (1057)
Q Consensus 513 vG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~-~dv~v~ps~~Egfgl~~lEAmA~- 590 (1057)
.|.++.--.-...-+++...+.+.+.++++ .+.|.-+=..-++.+.++.|..+ -.++++|.-+--.+..+.+|++.
T Consensus 13 LG~REp~iYG~~tl~di~~~~~~~a~~~g~--~v~~~QSN~EGelId~i~~a~~~~dgiIINpga~THtSiAl~DAl~~~ 90 (141)
T TIGR01088 13 LGLREPGVYGSQTLEEIVEIIETFAAQLNV--ELEFFQSNSEGQLIDKIHEAEGQYDGIIINPGALTHTSVALRDALAAV 90 (141)
T ss_pred cCCCCCCcCCCCCHHHHHHHHHHHHHHcCC--EEEEEeeCcHHHHHHHHHhccccCCEEEEcChHHhhhHHHHHHHHHcC
Confidence 355543323333345566777777777776 46665554455788888887443 35788898777889999999876
Q ss_pred CCcEEEcC--CCCchh------hhhcCCceEEeCCCCHHHHHHHHHHHH
Q 001541 591 GLPIVATK--NGGPVD------IHRVLDNGLLVDPHDQQSVADALLKLV 631 (1057)
Q Consensus 591 G~PVVat~--~Gg~~e------iv~~~~~Gllv~p~d~~~la~aI~~ll 631 (1057)
++|+|=-- +--.+| ++..-..|.+.- .-.+...-||..++
T Consensus 91 ~~P~vEVHiSNi~aRE~fR~~S~is~~~~G~I~G-~G~~gY~lAl~a~~ 138 (141)
T TIGR01088 91 SLPVVEVHLSNVHAREEFRHHSYTAPVAGGVIVG-LGAQGYLLALRYLV 138 (141)
T ss_pred CCCEEEEEcCCccccccccccccccccceEEEee-cCHHHHHHHHHHHH
Confidence 99987522 111222 222333455543 34556666665554
No 418
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=29.03 E-value=66 Score=34.53 Aligned_cols=48 Identities=19% Similarity=0.163 Sum_probs=38.1
Q ss_pred hHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 790 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 790 ~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
-+.+.+.|+.|+++ |+.++|+|+-+...+...++.+++. .-||.+||+
T Consensus 95 ~~g~~e~L~~Lk~~----g~~~~i~Tn~~~~~~~~~l~~~~l~-~~fd~iv~s 142 (224)
T PRK14988 95 REDTVPFLEALKAS----GKRRILLTNAHPHNLAVKLEHTGLD-AHLDLLLST 142 (224)
T ss_pred CCCHHHHHHHHHhC----CCeEEEEeCcCHHHHHHHHHHCCcH-HHCCEEEEe
Confidence 34677889999986 8999999998888888889988874 236666664
No 419
>PRK11587 putative phosphatase; Provisional
Probab=29.00 E-value=78 Score=33.62 Aligned_cols=46 Identities=15% Similarity=0.178 Sum_probs=36.1
Q ss_pred hHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEe
Q 001541 790 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFIC 841 (1057)
Q Consensus 790 ~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~ 841 (1057)
-+.+.+.|+.|+++ |+.++|+|+.+...+...++..++. .++.++|
T Consensus 85 ~pg~~e~L~~L~~~----g~~~~ivTn~~~~~~~~~l~~~~l~--~~~~i~~ 130 (218)
T PRK11587 85 LPGAIALLNHLNKL----GIPWAIVTSGSVPVASARHKAAGLP--APEVFVT 130 (218)
T ss_pred CcCHHHHHHHHHHc----CCcEEEEcCCCchHHHHHHHhcCCC--CccEEEE
Confidence 44778899999886 8999999998888777788888873 3566555
No 420
>COG0757 AroQ 3-dehydroquinate dehydratase II [Amino acid transport and metabolism]
Probab=28.84 E-value=2.2e+02 Score=28.20 Aligned_cols=82 Identities=18% Similarity=0.252 Sum_probs=55.9
Q ss_pred EecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcC-CcEEEEcCCCCCCCHHHHHHHHc-
Q 001541 513 MGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKT-KGVFINPAFIEPFGLTLIEAAAH- 590 (1057)
Q Consensus 513 vG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~-~dv~v~ps~~Egfgl~~lEAmA~- 590 (1057)
+|.++.--.-...-+++...+...+.+++. .+.|.-+=..-++.+....|... .+++++|.-+.-.+..+-.|++.
T Consensus 14 LG~REp~iYG~~Tl~di~~~~~~~a~~~g~--~v~~~QSN~Eg~Lid~Ihea~~~~~~IvINpga~THTSvAlrDAi~av 91 (146)
T COG0757 14 LGKREPGIYGSTTLEDIEADLEEEAAKLGV--EVEFRQSNHEGELIDWIHEARGKAGDIVINPGAYTHTSVALRDAIAAV 91 (146)
T ss_pred cCCCCCCccCcccHHHHHHHHHHHHHHcCc--eEEEEecCchHHHHHHHHHhhccCCeEEEcCccchhhHHHHHHHHHhc
Confidence 355443222223334556666777777776 46665554456888999888655 34999999888889999999877
Q ss_pred CCcEEE
Q 001541 591 GLPIVA 596 (1057)
Q Consensus 591 G~PVVa 596 (1057)
.+|+|=
T Consensus 92 ~iP~vE 97 (146)
T COG0757 92 SIPVVE 97 (146)
T ss_pred CCCEEE
Confidence 899975
No 421
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=28.78 E-value=33 Score=35.39 Aligned_cols=40 Identities=20% Similarity=0.187 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 001541 960 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 1002 (1057)
Q Consensus 960 Kg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVA 1002 (1057)
+...+.++++++|+++++++. +||+.+ | +.+-..+|..++
T Consensus 105 ~p~~~~~~~~~l~~~~~~~~~-VgDs~~-D-i~~A~~aG~~~i 144 (181)
T PRK08942 105 KPGMLLSIAERLNIDLAGSPM-VGDSLR-D-LQAAAAAGVTPV 144 (181)
T ss_pred CHHHHHHHHHHcCCChhhEEE-EeCCHH-H-HHHHHHCCCeEE
Confidence 367888999999999999998 888888 8 999999986543
No 422
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=28.78 E-value=36 Score=40.57 Aligned_cols=51 Identities=16% Similarity=0.188 Sum_probs=36.5
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCCchhhhhhhhhcC
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANR 1018 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~~~~~~~~~a~~ 1018 (1057)
.|-..++.-.. ....+|..||+.| | -+-|..+..|+||-++...+ +..+|.
T Consensus 497 dK~~~I~~eQ~-----~grlVAMtGDGTN-D-APALAqAdVg~AMNsGTqAA--kEAaNM 547 (681)
T COG2216 497 DKLALIRQEQA-----EGRLVAMTGDGTN-D-APALAQADVGVAMNSGTQAA--KEAANM 547 (681)
T ss_pred HHHHHHHHHHh-----cCcEEEEcCCCCC-c-chhhhhcchhhhhccccHHH--HHhhcc
Confidence 45555544322 2357888999999 9 99999999999999988333 344443
No 423
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=28.47 E-value=2.1e+02 Score=32.78 Aligned_cols=99 Identities=13% Similarity=0.094 Sum_probs=59.9
Q ss_pred CcEEEEEe-CCCCCCCHH--HHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001541 475 KPVILALA-RPDPKKNIT--TLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 551 (1057)
Q Consensus 475 ~~~Il~vG-Rl~~~Kgi~--~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~ 551 (1057)
+.+++..| .-...|+++ ...+.++.+.+.. ..+ ++.|+.++ .+..+.+.+.+.- .+.+.|.
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~--~~V-vl~g~~~e-----------~e~~~~i~~~~~~--~~~l~~k 239 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIAKG--YQV-VLFGGPDE-----------EERAEEIAKGLPN--AVILAGK 239 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHHCC--CEE-EEecChHH-----------HHHHHHHHHhcCC--ccccCCC
Confidence 44566677 444666655 5555555554322 333 45565433 2344445544432 2227888
Q ss_pred CCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcC
Q 001541 552 HKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK 598 (1057)
Q Consensus 552 v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~ 598 (1057)
.+-.++..++..| |++|-+.. |+ +-=|.|.|+|+|+--
T Consensus 240 ~sL~e~~~li~~a----~l~I~~DS----g~-~HlAaA~~~P~I~iy 277 (334)
T COG0859 240 TSLEELAALIAGA----DLVIGNDS----GP-MHLAAALGTPTIALY 277 (334)
T ss_pred CCHHHHHHHHhcC----CEEEccCC----hH-HHHHHHcCCCEEEEE
Confidence 8899999999999 89886531 22 333688899999954
No 424
>PF02947 Flt3_lig: flt3 ligand ; InterPro: IPR004213 The flt3 (fms-related tyrosine kinase 3) ligand is a short chain cytokine with a 4 helical bundle fold. It is a type I membrane protein which stimulates the proliferation of of early hematopoeitic cells, and synergises well with other colony stimulating factors and interleukins.; GO: 0005125 cytokine activity, 0016020 membrane; PDB: 3QS7_A 1ETE_C 3QS9_A.
Probab=28.03 E-value=47 Score=31.82 Aligned_cols=13 Identities=23% Similarity=0.848 Sum_probs=9.2
Q ss_pred hhhhhhHHHHHhh
Q 001541 74 RLENMCWRIWNLA 86 (1057)
Q Consensus 74 ~~~~~~~~~~~~~ 86 (1057)
+=|-+||-.|||.
T Consensus 39 qdde~C~alWhL~ 51 (135)
T PF02947_consen 39 QDDELCGALWHLV 51 (135)
T ss_dssp ---TTTHHHHHHH
T ss_pred ccHHHHHHHHHHH
Confidence 4477999999986
No 425
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=27.54 E-value=59 Score=34.52 Aligned_cols=34 Identities=6% Similarity=0.015 Sum_probs=0.0
Q ss_pred CcceEEEEEecCCCCCcchHHHHHHHHHHHhhhcCCCe
Q 001541 772 RRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSI 809 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL~~~i~~~t~~al~~l~~~~~~~gi 809 (1057)
.+.++|+||+||||.....-......+.+++. |+
T Consensus 2 ~~~~~viFD~DGTL~d~~~~~~~a~~~~~~~~----g~ 35 (221)
T PRK10563 2 SQIEAVFFDCDGTLVDSEVICSRAYVTMFAEF----GI 35 (221)
T ss_pred CCCCEEEECCCCCCCCChHHHHHHHHHHHHHc----CC
No 426
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=27.33 E-value=40 Score=37.79 Aligned_cols=41 Identities=20% Similarity=0.097 Sum_probs=35.8
Q ss_pred HHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeC
Q 001541 961 SQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 1004 (1057)
Q Consensus 961 g~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMg 1004 (1057)
...+..+++++|++++++++ +||+.+ | +++=+.+|..++.-
T Consensus 205 p~~~~~a~~~~~~~p~~~l~-IGDs~~-D-i~aA~~aG~~~i~v 245 (286)
T PLN02779 205 PDIYNLAAETLGVDPSRCVV-VEDSVI-G-LQAAKAAGMRCIVT 245 (286)
T ss_pred HHHHHHHHHHhCcChHHEEE-EeCCHH-h-HHHHHHcCCEEEEE
Confidence 56889999999999999999 888888 8 99999999776654
No 427
>cd00466 DHQase_II Dehydroquinase (DHQase), type II. Dehydroquinase (or 3-dehydroquinate dehydratase) catalyzes the reversible dehydration of 3-dehydroquinate to form 3-dehydroshikimate. This reaction is part of two metabolic pathways: the biosynthetic shikimate pathway and the catabolic quinate pathway. There are two types of DHQases, which are distinct from each other in amino acid sequence and three-dimensional structure. Type I enzymes usually catalyze the biosynthetic reaction using a syn elimination mechanism. In contrast, type II enzymes, found in the quinate pathway of fungi and in the shikimate pathway of many bacteria, are dodecameric enzymes that employ an anti elimination reaction mechanism.
Probab=26.95 E-value=1.5e+02 Score=29.58 Aligned_cols=116 Identities=16% Similarity=0.245 Sum_probs=70.5
Q ss_pred EecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCC-cEEEEcCCCCCCCHHHHHHHHc-
Q 001541 513 MGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTK-GVFINPAFIEPFGLTLIEAAAH- 590 (1057)
Q Consensus 513 vG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~-dv~v~ps~~Egfgl~~lEAmA~- 590 (1057)
+|.++.--.-...-+++...+.+.+.++++ .+.|.-.=..-++.+.++.|..+. .++++|.-+--.+..+..|+++
T Consensus 13 LG~Rep~iYG~~tl~~i~~~l~~~a~~~g~--~v~~~QSN~Egelid~I~~a~~~~dgiIINpga~THtSvAi~DAl~~~ 90 (140)
T cd00466 13 LGKREPEIYGTTTLADIEALLRELAAELGV--EVEFFQSNHEGELIDWIHEARDGADGIIINPGAYTHTSIALRDALAAV 90 (140)
T ss_pred cCCCCCCcCCcCCHHHHHHHHHHHHHHcCC--EEEEEeeCcHHHHHHHHHHhhccCcEEEEcchHHHHHHHHHHHHHHcC
Confidence 455543322233345667777777777776 466655544567888888875433 4778888777788999999877
Q ss_pred CCcEEEcCCC--Cchh------hhhcCCceEEeCCCCHHHHHHHHHHHH
Q 001541 591 GLPIVATKNG--GPVD------IHRVLDNGLLVDPHDQQSVADALLKLV 631 (1057)
Q Consensus 591 G~PVVat~~G--g~~e------iv~~~~~Gllv~p~d~~~la~aI~~ll 631 (1057)
++|+|=--.. -.+| ++..-..|.++- .-.+...-||..++
T Consensus 91 ~~P~VEVHiSNi~aRE~fR~~S~is~~~~G~I~G-~G~~gY~lAl~~~~ 138 (140)
T cd00466 91 SIPVIEVHISNIHAREEFRHHSVISPVATGVIAG-LGADGYRLALEALA 138 (140)
T ss_pred CCCEEEEecCCcccccccccccccccceeEEEEe-CCHHHHHHHHHHHH
Confidence 8998753211 1222 233334455553 35566666666554
No 428
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=26.92 E-value=1.1e+02 Score=35.35 Aligned_cols=49 Identities=10% Similarity=0.003 Sum_probs=38.9
Q ss_pred hHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhC-C-------CCCCCCCeEEeCC
Q 001541 790 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSG-H-------LSPSDFDAFICNS 843 (1057)
Q Consensus 790 ~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~l-g-------l~~~~~D~lI~~n 843 (1057)
.+.+.+.|++++++ |+.++|+|.-+...+..+++.+ + +. .-||.+|+..
T Consensus 186 ~pgl~elL~~Lr~~----G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~-~yFD~IIt~a 242 (343)
T TIGR02244 186 DPKLPLFLSKLKEH----GKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWR-DYFDVVIVDA 242 (343)
T ss_pred chhHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHhhCCcccccchH-hhCcEEEeCC
Confidence 56888999999986 8999999999999999999986 5 22 2356666643
No 429
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=26.82 E-value=2.6e+02 Score=31.99 Aligned_cols=43 Identities=14% Similarity=0.069 Sum_probs=32.4
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEc
Q 001541 546 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT 597 (1057)
Q Consensus 546 V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat 597 (1057)
+.+.|..+-.++.++++.| +++|-.- + -.+-=|.|.|+|+|+-
T Consensus 244 ~~l~g~~sL~el~ali~~a----~l~I~nD---T--Gp~HlAaA~g~P~val 286 (348)
T PRK10916 244 RNLAGETQLEQAVILIAAC----KAIVTND---S--GLMHVAAALNRPLVAL 286 (348)
T ss_pred eeccCCCCHHHHHHHHHhC----CEEEecC---C--hHHHHHHHhCCCEEEE
Confidence 5567888888999999999 8888552 2 1233478889999984
No 430
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=26.77 E-value=4.1e+02 Score=29.31 Aligned_cols=86 Identities=13% Similarity=0.054 Sum_probs=51.2
Q ss_pred HHHHcCCCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCC--CCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCc
Q 001541 536 LIDKYDLYG--QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIE--PFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDN 611 (1057)
Q Consensus 536 l~~~~~l~~--~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~E--gfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~ 611 (1057)
.+.++|+.+ .+..-|..+.+.=.++++.. ..|++|.=-..+ |+--++--|..+|+|||.-+-+.... .
T Consensus 166 ~~~~~G~~~~~iia~~gPfs~e~n~al~~~~--~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~~------~ 237 (256)
T TIGR00715 166 QALKLGFPSDRIIAMRGPFSEELEKALLREY--RIDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQTIP------G 237 (256)
T ss_pred HHHHcCCChhcEEEEeCCCCHHHHHHHHHHc--CCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCCC------C
Confidence 455555533 35556766666666677655 236655433222 45557777888899999977764321 1
Q ss_pred eEEeCCCCHHHHHHHHHHHH
Q 001541 612 GLLVDPHDQQSVADALLKLV 631 (1057)
Q Consensus 612 Gllv~p~d~~~la~aI~~ll 631 (1057)
...|. +.+++.+.+.+++
T Consensus 238 ~~~~~--~~~el~~~l~~~~ 255 (256)
T TIGR00715 238 VAIFD--DISQLNQFVARLL 255 (256)
T ss_pred CccCC--CHHHHHHHHHHhc
Confidence 12343 7788877776654
No 431
>PF14980 TIP39: TIP39 peptide
Probab=26.40 E-value=44 Score=26.40 Aligned_cols=15 Identities=40% Similarity=0.973 Sum_probs=12.1
Q ss_pred chhhhHHHHHHHhcC
Q 001541 4 NDWINSYLEAILDVG 18 (1057)
Q Consensus 4 ~~~~~~~~~~~~~~~ 18 (1057)
-.|+|||..-+|-++
T Consensus 36 ~~WLnSYMqkLLv~~ 50 (51)
T PF14980_consen 36 QKWLNSYMQKLLVVN 50 (51)
T ss_pred HHHHHHHHHHHHccc
Confidence 459999999888654
No 432
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=26.28 E-value=36 Score=33.90 Aligned_cols=41 Identities=20% Similarity=0.242 Sum_probs=34.2
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 1002 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVA 1002 (1057)
.+..+.+.+++.+|+++++++. +||+.. | +.+=..+|...+
T Consensus 134 p~~~~~~~~~~~~~~~p~~~~~-vgD~~~-d-~~~A~~~G~~~i 174 (176)
T PF13419_consen 134 PDPDAYRRALEKLGIPPEEILF-VGDSPS-D-VEAAKEAGIKTI 174 (176)
T ss_dssp TSHHHHHHHHHHHTSSGGGEEE-EESSHH-H-HHHHHHTTSEEE
T ss_pred hHHHHHHHHHHHcCCCcceEEE-EeCCHH-H-HHHHHHcCCeEE
Confidence 4568899999999999999988 888887 8 888888886544
No 433
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=26.24 E-value=4.3e+02 Score=29.26 Aligned_cols=111 Identities=12% Similarity=0.073 Sum_probs=64.1
Q ss_pred EEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHH
Q 001541 480 ALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPE 559 (1057)
Q Consensus 480 ~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ 559 (1057)
+++.+.--...+.+++.+.++.+.........+-=++........-..+-+..+.+.++++|+. .+.-.++..++..
T Consensus 28 ~IAGpc~ie~~~~~~~~A~~lk~~~~k~~r~~~~KpRtsp~s~~g~g~~gl~~l~~~~~~~Gl~---~~t~~~d~~~~~~ 104 (260)
T TIGR01361 28 VIAGPCSVESEEQIMETARFVKEAGAKILRGGAFKPRTSPYSFQGLGEEGLKLLRRAADEHGLP---VVTEVMDPRDVEI 104 (260)
T ss_pred EEEeCCccCCHHHHHHHHHHHHHHHHHhccCceecCCCCCccccccHHHHHHHHHHHHHHhCCC---EEEeeCChhhHHH
Confidence 3555666667888888887776422110000011011111011111123356677888888862 3344445667777
Q ss_pred HHHHhhcCCcEEEEcCCCCCCCHHHHHHHHc-CCcEEEcC
Q 001541 560 IYRLAAKTKGVFINPAFIEPFGLTLIEAAAH-GLPIVATK 598 (1057)
Q Consensus 560 ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~-G~PVVat~ 598 (1057)
+...+ |++-++|. +-.+..+++++|. |+||+.+.
T Consensus 105 l~~~~----d~lkI~s~-~~~n~~LL~~~a~~gkPVilk~ 139 (260)
T TIGR01361 105 VAEYA----DILQIGAR-NMQNFELLKEVGKQGKPVLLKR 139 (260)
T ss_pred HHhhC----CEEEECcc-cccCHHHHHHHhcCCCcEEEeC
Confidence 77777 99888884 6667778887776 99998865
No 434
>PRK06769 hypothetical protein; Validated
Probab=26.03 E-value=1.1e+02 Score=31.36 Aligned_cols=42 Identities=24% Similarity=0.264 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeC
Q 001541 960 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 1004 (1057)
Q Consensus 960 Kg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMg 1004 (1057)
+..-+...++++|+++++++. +||+.. | +..=+.+|..++.-
T Consensus 95 ~p~~~~~~~~~l~~~p~~~i~-IGD~~~-D-i~aA~~aGi~~i~v 136 (173)
T PRK06769 95 STGMLLQAAEKHGLDLTQCAV-IGDRWT-D-IVAAAKVNATTILV 136 (173)
T ss_pred CHHHHHHHHHHcCCCHHHeEE-EcCCHH-H-HHHHHHCCCeEEEE
Confidence 456788889999999999988 888887 8 88888888665543
No 435
>PRK00207 sulfur transfer complex subunit TusD; Validated
Probab=25.36 E-value=1.1e+02 Score=29.91 Aligned_cols=39 Identities=13% Similarity=0.019 Sum_probs=28.8
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeee-EEEEec
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYR-VDLLTR 218 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~-V~vit~ 218 (1057)
|||+++..++ |+.+-..+-.+.+|+++...| |+ |.||-.
T Consensus 1 m~~~iv~~~~------------Py~~~~~~~al~~A~aa~~~g--h~v~~vFf~ 40 (128)
T PRK00207 1 MRYAIAVTGP------------AYGTQQASSAYQFAQALLAEG--HELVSVFFY 40 (128)
T ss_pred CEEEEEEcCC------------CCCCHHHHHHHHHHHHHHhCC--CCeeEEEEe
Confidence 6788886433 454555678889999999998 98 577744
No 436
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=25.28 E-value=79 Score=38.05 Aligned_cols=48 Identities=6% Similarity=0.045 Sum_probs=39.2
Q ss_pred hHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 790 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 790 ~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
-+.+.+.|+.|+++ |+.++|+|+.+...+...++.+++. ..||.++|.
T Consensus 332 ~pG~~e~L~~Lk~~----g~~l~IvS~~~~~~~~~~l~~~~l~-~~f~~i~~~ 379 (459)
T PRK06698 332 YPNVKEIFTYIKEN----NCSIYIASNGLTEYLRAIVSYYDLD-QWVTETFSI 379 (459)
T ss_pred CCCHHHHHHHHHHC----CCeEEEEeCCchHHHHHHHHHCCcH-hhcceeEec
Confidence 45778899999886 8999999999999999999999984 235666653
No 437
>TIGR01975 isoAsp_dipep isoaspartyl dipeptidase IadA. The L-isoaspartyl derivative of Asp arises non-enzymatically over time as a form of protein damage. In this isomerization, the connectivity of the polypeptide changes to pass through the beta-carboxyl of the side chain. Much but not all of this damage can be repaired by protein-L-isoaspartate (D-aspartate) O-methyltransferase. This model describes the isoaspartyl dipeptidase IadA, apparently one of two such enzymes in E. coli, an enzyme that degrades isoaspartyl dipeptides and may unblock degradation of proteins that cannot be repaired. This model also describes closely related proteins from other species (e.g. Clostridium perfringens, Thermoanaerobacter tengcongensis) that we assume to be equivalent in function. This family shows homology to dihydroorotases.
Probab=25.28 E-value=1.1e+03 Score=27.71 Aligned_cols=102 Identities=17% Similarity=0.240 Sum_probs=64.3
Q ss_pred CCCCHHHHHHHHHhccccc---CCCc-EEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCC-----c
Q 001541 486 PKKNITTLVKAFGECRPLR---ELAN-LTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQS-----D 556 (1057)
Q Consensus 486 ~~Kgi~~Ll~A~~~l~~~~---~~~~-l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~-----d 556 (1057)
..-+++.|.++.+..+... ..|- +.+-+|+++. .++.+..++++-++.-+.+.+.++.+. +
T Consensus 166 ~~~~~~~l~~~~~~~~~~g~~~~~~g~~~vH~g~~~~----------~l~~l~~~~~~~di~~~~f~pth~~r~~~l~~~ 235 (389)
T TIGR01975 166 AQPTVEHLTNMAAEARVGGLLGGKPGIVNFHVGDSKR----------ALQPIYELVENTDVPITQFLPTHINRNVPLFEA 235 (389)
T ss_pred CCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCchh----------hHHHHHHHHHhcCCChhheecCccCCCHHHHHH
Confidence 6678899988888775432 1232 4467788764 377888889888887767667776544 2
Q ss_pred HHHHHHHhhcCCcEEEEcCCCCCCC--------H-HHHHHHHcCCc----EEEcCCCC
Q 001541 557 VPEIYRLAAKTKGVFINPAFIEPFG--------L-TLIEAAAHGLP----IVATKNGG 601 (1057)
Q Consensus 557 l~~ly~~Aa~~~dv~v~ps~~Egfg--------l-~~lEAmA~G~P----VVat~~Gg 601 (1057)
..++.+.. +++=+++-..++. . .+..+...|+| .++|+..|
T Consensus 236 ~i~~~~~g----g~iDv~~~~~~~~l~~~~~~~~~~~~~~~~~Gv~~~~i~isSD~~g 289 (389)
T TIGR01975 236 GLEFAKKG----GTIDLTSSIDPQFRKEGEVAPAEGIKKALEAGVPLEKVTFSSDGNG 289 (389)
T ss_pred HHHHHHhC----CcEEEeCCCCccchhccccChHHHHHHHHHcCCCcceEEEEeCCCC
Confidence 33333333 4444443222221 1 45778889998 68898754
No 438
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=24.67 E-value=1.8e+02 Score=37.50 Aligned_cols=56 Identities=7% Similarity=0.063 Sum_probs=49.8
Q ss_pred CcceEEEEEecCCCC------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 772 RRKHIFVISVDCDST------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL~------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
..+-.+.+.+||+|. .++.+....++..|++. |+.+++.||=....++...+++|+
T Consensus 701 ~g~tvv~v~vn~~l~gv~~l~D~vr~~a~~av~~Lk~~----Gi~v~mLTGDn~~aA~svA~~VGi 762 (951)
T KOG0207|consen 701 KGQTVVYVAVNGQLVGVFALEDQVRPDAALAVAELKSM----GIKVVMLTGDNDAAARSVAQQVGI 762 (951)
T ss_pred cCceEEEEEECCEEEEEEEeccccchhHHHHHHHHHhc----CceEEEEcCCCHHHHHHHHHhhCc
Confidence 345678899999993 56778899999999997 899999999999999999999997
No 439
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=23.98 E-value=1.2e+02 Score=29.96 Aligned_cols=44 Identities=11% Similarity=0.197 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEe
Q 001541 792 ATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFIC 841 (1057)
Q Consensus 792 ~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~ 841 (1057)
.+.+.|+.|+++ |+.++|+|+.+...+..+++.+ +. ..|+.++|
T Consensus 68 g~~e~l~~L~~~----g~~~~i~T~~~~~~~~~~~~~~-l~-~~f~~i~~ 111 (154)
T TIGR01549 68 GAADLLKRLKEA----GIKLGIISNGSLRAQKLLLRKH-LG-DYFDLILG 111 (154)
T ss_pred CHHHHHHHHHHC----cCeEEEEeCCchHHHHHHHHHH-HH-hcCcEEEe
Confidence 467888999876 8999999999999999888885 42 12455555
No 440
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=23.89 E-value=63 Score=41.27 Aligned_cols=49 Identities=14% Similarity=0.200 Sum_probs=41.3
Q ss_pred eEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCCc
Q 001541 950 RINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGIC 1007 (1057)
Q Consensus 950 ~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~ 1007 (1057)
+-|++|. .|..=++.|.+.- ..+|++||+-| | -+-|..+..||+||.+.
T Consensus 766 ~aev~P~--~K~~~Ik~lq~~~-----~~VaMVGDGIN-D-aPALA~AdVGIaig~gs 814 (951)
T KOG0207|consen 766 YAEVLPE--QKAEKIKEIQKNG-----GPVAMVGDGIN-D-APALAQADVGIAIGAGS 814 (951)
T ss_pred EeccCch--hhHHHHHHHHhcC-----CcEEEEeCCCC-c-cHHHHhhccceeecccc
Confidence 5677776 6888888887753 46788999999 9 99999999999999876
No 441
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=22.73 E-value=1.2e+02 Score=31.91 Aligned_cols=47 Identities=15% Similarity=0.125 Sum_probs=36.5
Q ss_pred hHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 790 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 790 ~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
-+.+.+.|+.+++ . +.++|+|+.+...+...++.+++. .-||.++|+
T Consensus 99 ~~g~~~~L~~l~~----~-~~~~i~Sn~~~~~~~~~l~~~~l~-~~fd~i~~~ 145 (224)
T TIGR02254 99 LPGAFELMENLQQ----K-FRLYIVTNGVRETQYKRLRKSGLF-PFFDDIFVS 145 (224)
T ss_pred CccHHHHHHHHHh----c-CcEEEEeCCchHHHHHHHHHCCcH-hhcCEEEEc
Confidence 3467788888876 3 789999999999999999999984 236666664
No 442
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=22.61 E-value=1.6e+02 Score=34.73 Aligned_cols=84 Identities=12% Similarity=-0.002 Sum_probs=55.5
Q ss_pred HHHHHHHcCCcEEEcCCC---CchhhhhcCCceEEeCC-CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHH
Q 001541 583 TLIEAAAHGLPIVATKNG---GPVDIHRVLDNGLLVDP-HDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHC 657 (1057)
Q Consensus 583 ~~lEAmA~G~PVVat~~G---g~~eiv~~~~~Gllv~p-~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a 657 (1057)
.+.=-|+||-.|+..... -.-+.+....+=+=|.. .|.++|.++|.-+.+++++.++++++|++.+ +..+.+.+.
T Consensus 229 RlkylL~c~SvVl~~~~~~~e~f~~~L~P~vHYVPV~~~~d~sdL~~~v~w~~~~~~~A~~IA~~g~~f~~~~L~~~~~~ 308 (395)
T PF05686_consen 229 RLKYLLACNSVVLKVKSPYYEFFYRALKPWVHYVPVKRDDDLSDLEEKVEWLNAHDDEAQRIAENGQRFAREYLTMEDVY 308 (395)
T ss_pred hHHHHHcCCceEEEeCCcHHHHHHhhhcccccEEEeccccchhhHHHHhhhcccChHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 344446777666654321 11222333445455554 4789999999999999999999999999998 577777766
Q ss_pred HHHHHHHHc
Q 001541 658 KTYLSRIAG 666 (1057)
Q Consensus 658 ~~~l~~~~~ 666 (1057)
.-+..++.+
T Consensus 309 ~Y~~~LL~e 317 (395)
T PF05686_consen 309 CYWRRLLLE 317 (395)
T ss_pred HHHHHHHHH
Confidence 555444443
No 443
>PRK09449 dUMP phosphatase; Provisional
Probab=22.53 E-value=1e+02 Score=32.71 Aligned_cols=47 Identities=15% Similarity=0.116 Sum_probs=37.0
Q ss_pred hHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 790 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 790 ~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
-+.+.++|+.|+ + |+.++|+|.-+...+...++.+|+. .-||.++|+
T Consensus 97 ~~g~~~~L~~L~-~----~~~~~i~Tn~~~~~~~~~l~~~~l~-~~fd~v~~~ 143 (224)
T PRK09449 97 LPGAVELLNALR-G----KVKMGIITNGFTELQQVRLERTGLR-DYFDLLVIS 143 (224)
T ss_pred CccHHHHHHHHH-h----CCeEEEEeCCcHHHHHHHHHhCChH-HHcCEEEEE
Confidence 346778889998 4 6899999998888888899999884 236777765
No 444
>PRK05395 3-dehydroquinate dehydratase; Provisional
Probab=22.09 E-value=1.9e+02 Score=28.98 Aligned_cols=116 Identities=16% Similarity=0.204 Sum_probs=70.6
Q ss_pred EecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcC-CcEEEEcCCCCCCCHHHHHHHHc-
Q 001541 513 MGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKT-KGVFINPAFIEPFGLTLIEAAAH- 590 (1057)
Q Consensus 513 vG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~-~dv~v~ps~~Egfgl~~lEAmA~- 590 (1057)
.|.++.--.-...-+++...+.+.+..+++ .+.|.-.=..-++.+.++.|... -.++++|.-+--.+..+..|++.
T Consensus 15 LG~Rep~iYG~~tl~~i~~~~~~~a~~~g~--~v~~~QSN~EGelId~I~~a~~~~dgiiINpga~THtSiAl~DAl~~~ 92 (146)
T PRK05395 15 LGTREPEIYGSTTLADIEALLEEEAAELGV--ELEFFQSNHEGELIDRIHEARDGADGIIINPGAYTHTSVALRDALAAV 92 (146)
T ss_pred cCCCCCCcCCCCCHHHHHHHHHHHHHHcCC--EEEEEeeCcHHHHHHHHHhcccCCcEEEECchHHHHHHHHHHHHHHcC
Confidence 355543223233345667777777777776 36555544355788888877433 34778888777788999999876
Q ss_pred CCcEEE---cCCCCchh------hhhcCCceEEeCCCCHHHHHHHHHHHHh
Q 001541 591 GLPIVA---TKNGGPVD------IHRVLDNGLLVDPHDQQSVADALLKLVA 632 (1057)
Q Consensus 591 G~PVVa---t~~Gg~~e------iv~~~~~Gllv~p~d~~~la~aI~~ll~ 632 (1057)
++|+|= |+.- .+| ++..-..|.+.- .-.+...-||..+++
T Consensus 93 ~~P~VEVHiSNi~-aRE~fR~~S~is~~a~G~I~G-~G~~gY~lAl~al~~ 141 (146)
T PRK05395 93 SIPVIEVHLSNIH-AREEFRHHSYISDVAVGVICG-FGADGYLLALEALAE 141 (146)
T ss_pred CCCEEEEecCCcc-ccccccccccccccceEEEee-CCHHhHHHHHHHHHH
Confidence 999975 3321 222 233334455553 355666666665553
No 445
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=21.97 E-value=4.3e+02 Score=28.25 Aligned_cols=72 Identities=13% Similarity=0.193 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHcCCCCCEEeCCCCC-CCcHHHHHHHhhcCCcEEEEc-CCCCCCCHHHHHHHHcCCcEEEcCCC
Q 001541 529 VLLSVLKLIDKYDLYGQVAYPKHHK-QSDVPEIYRLAAKTKGVFINP-AFIEPFGLTLIEAAAHGLPIVATKNG 600 (1057)
Q Consensus 529 ~~~~l~~l~~~~~l~~~V~f~g~v~-~~dl~~ly~~Aa~~~dv~v~p-s~~Egfgl~~lEAmA~G~PVVat~~G 600 (1057)
+..-+.+.++++++.-.+.+...-+ ..++..+=+..++..|.+|+. ...+...-.+-++...|+|||..+.+
T Consensus 16 ~~~g~~~~a~~~g~~~~~~~~~~~d~~~q~~~i~~~i~~~~d~Iiv~~~~~~~~~~~l~~~~~~gIpvv~~d~~ 89 (257)
T PF13407_consen 16 VIKGAKAAAKELGYEVEIVFDAQNDPEEQIEQIEQAISQGVDGIIVSPVDPDSLAPFLEKAKAAGIPVVTVDSD 89 (257)
T ss_dssp HHHHHHHHHHHHTCEEEEEEESTTTHHHHHHHHHHHHHTTESEEEEESSSTTTTHHHHHHHHHTTSEEEEESST
T ss_pred HHHHHHHHHHHcCCEEEEeCCCCCCHHHHHHHHHHHHHhcCCEEEecCCCHHHHHHHHHHHhhcCceEEEEecc
Confidence 4555666777777654443223222 223333333334445765544 44555666777888899999998887
No 446
>PRK10840 transcriptional regulator RcsB; Provisional
Probab=21.80 E-value=7e+02 Score=25.99 Aligned_cols=65 Identities=23% Similarity=0.306 Sum_probs=44.7
Q ss_pred cEEEEcCCCCC----CCHHHHHHHHc---CCcEEE-cCCCCc---hhhhhcCCceEEeCCCCHHHHHHHHHHHHhC
Q 001541 569 GVFINPAFIEP----FGLTLIEAAAH---GLPIVA-TKNGGP---VDIHRVLDNGLLVDPHDQQSVADALLKLVAD 633 (1057)
Q Consensus 569 dv~v~ps~~Eg----fgl~~lEAmA~---G~PVVa-t~~Gg~---~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d 633 (1057)
|++++-....+ -|+.+++.+.. .+|||. |..... ...++.|..|++..|.+++++..+|..++..
T Consensus 51 DlvllD~~l~~~~~~~g~~~~~~l~~~~~~~~iIvls~~~~~~~~~~a~~~Ga~~yl~K~~~~~~l~~ai~~v~~g 126 (216)
T PRK10840 51 HVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKG 126 (216)
T ss_pred CEEEEeCcCCCCCCCCHHHHHHHHHHHCCCCcEEEEEecCCHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHHHCC
Confidence 88887643322 57777776643 567765 333332 2446678889999999999999999887663
No 447
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=21.77 E-value=2.3e+02 Score=29.20 Aligned_cols=44 Identities=11% Similarity=0.295 Sum_probs=29.7
Q ss_pred eEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcc
Q 001541 950 RINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVH 998 (1057)
Q Consensus 950 ~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag 998 (1057)
++||-|- ||.+=++.|.+..||+.++|+. |||..- . ++-.+..|
T Consensus 101 ~~eI~~g--sK~~Hf~~i~~~tgI~y~eMlF-FDDe~~-N-~~~v~~lG 144 (169)
T PF12689_consen 101 YLEIYPG--SKTTHFRRIHRKTGIPYEEMLF-FDDESR-N-IEVVSKLG 144 (169)
T ss_dssp EEEESSS---HHHHHHHHHHHH---GGGEEE-EES-HH-H-HHHHHTTT
T ss_pred hhheecC--chHHHHHHHHHhcCCChhHEEE-ecCchh-c-ceeeEecC
Confidence 6999995 9999999999999999999766 776654 2 44444433
No 448
>cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43).
Probab=21.62 E-value=1.5e+02 Score=31.95 Aligned_cols=83 Identities=18% Similarity=0.205 Sum_probs=52.7
Q ss_pred EEEEecCCCCCccHHHHHHHHHHhcCcE-EEEEeeCCeeEEEecCCC-CHHHHHHHHHHHhCCCcccEEEEecCCCCCCc
Q 001541 913 YAFSVQKPGMTPPVKELRKVLRIQALRC-HVIYCQNGSRINVIPVLA-SRSQALRYLYLRWGVELSKMVVFVGESGDTDY 990 (1057)
Q Consensus 913 ~~~~~~~~~~~~~~~el~~~l~~~~~~~-~v~~s~~~~~lEI~p~ga-sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~ 990 (1057)
+.|.+.+.. .....+..+.|+.-+..+ |+....+...-...|.++ .+-.||+++-+++.-..+-|+.|+||+|.-|
T Consensus 32 l~WIVVEd~-~~~t~~va~lL~~sgl~y~HL~~~~~~~~~~~~~rg~~qRn~AL~~ir~~~~~~~~GVVyFADDdN~Ys- 109 (223)
T cd00218 32 LHWIVVEDS-EEKTPLVAELLRRSGLMYTHLNAKTPSDPTWLKPRGVEQRNLALRWIREHLSAKLDGVVYFADDDNTYD- 109 (223)
T ss_pred eEEEEEeCC-CCCCHHHHHHHHHcCCceEEeccCCCCCcccCCcccHHHHHHHHHHHHhccccCcceEEEEccCCCccc-
Confidence 456653322 123456777787766543 333322211234566666 4779999999987656778999999999877
Q ss_pred cccccCc
Q 001541 991 EGLLGGV 997 (1057)
Q Consensus 991 ~eML~~a 997 (1057)
+++|+..
T Consensus 110 l~lF~em 116 (223)
T cd00218 110 LELFEEM 116 (223)
T ss_pred HHHHHHH
Confidence 7777654
No 449
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=21.41 E-value=9.2e+02 Score=24.96 Aligned_cols=127 Identities=16% Similarity=0.125 Sum_probs=0.0
Q ss_pred cceEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEE-EEecCCCCCCCCCccCCcccccCCCCCC
Q 001541 164 KKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVD-LLTRQVSAPDVDWSYGEPTEMLTPRNSD 242 (1057)
Q Consensus 164 ~~m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~-vit~~~~~~~~~~~y~~~~e~l~~~~~~ 242 (1057)
+.|||.+-..-|. |-.+.+..++..|...| +.|- ++|.......-.+
T Consensus 4 ~~mki~ITG~PGv---------------GKtTl~~ki~e~L~~~g--~kvgGf~t~EVR~gGkR~--------------- 51 (179)
T COG1618 4 MAMKIFITGRPGV---------------GKTTLVLKIAEKLREKG--YKVGGFITPEVREGGKRI--------------- 51 (179)
T ss_pred cceEEEEeCCCCc---------------cHHHHHHHHHHHHHhcC--ceeeeEEeeeeecCCeEe---------------
Q ss_pred ccccccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHH--
Q 001541 243 DFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDS-- 320 (1057)
Q Consensus 243 ~~~~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~-- 320 (1057)
|.+|+-+..|.....-....--|.+..+.-..-..-.-+..+|.+.+ ..-|+|...-.-+.-.
T Consensus 52 ----------GF~Ivdl~tg~~~~la~~~~~~~rvGkY~V~v~~le~i~~~al~rA~-----~~aDvIIIDEIGpMElks 116 (179)
T COG1618 52 ----------GFKIVDLATGEEGILARVGFSRPRVGKYGVNVEGLEEIAIPALRRAL-----EEADVIIIDEIGPMELKS 116 (179)
T ss_pred ----------eeEEEEccCCceEEEEEcCCCCcccceEEeeHHHHHHHhHHHHHHHh-----hcCCEEEEecccchhhcc
Q ss_pred -----HHHHHhcCCCCEEEEec
Q 001541 321 -----AALLSGALNVPMLFTGH 337 (1057)
Q Consensus 321 -----a~~l~~~~~iP~V~t~H 337 (1057)
+..-.-..+.|++.|+|
T Consensus 117 ~~f~~~ve~vl~~~kpliatlH 138 (179)
T COG1618 117 KKFREAVEEVLKSGKPLIATLH 138 (179)
T ss_pred HHHHHHHHHHhcCCCcEEEEEe
No 450
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=21.40 E-value=40 Score=34.25 Aligned_cols=10 Identities=20% Similarity=0.076 Sum_probs=0.0
Q ss_pred EEEEEecCCC
Q 001541 776 IFVISVDCDS 785 (1057)
Q Consensus 776 Li~~DiDGTL 785 (1057)
+|+||+||||
T Consensus 1 ~viFD~DGTL 10 (175)
T TIGR01493 1 AMVFDVYGTL 10 (175)
T ss_pred CeEEecCCcC
No 451
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=21.40 E-value=50 Score=33.73 Aligned_cols=39 Identities=10% Similarity=-0.016 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEE
Q 001541 960 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTV 1001 (1057)
Q Consensus 960 Kg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gV 1001 (1057)
+...+.++++++|++++++++ +||+.. | +++=+.+|...
T Consensus 144 ~~~~~~~~~~~~~~~~~~~v~-IgD~~~-d-i~aA~~~G~~~ 182 (185)
T TIGR02009 144 HPETFLLAAELLGVSPNECVV-FEDALA-G-VQAARAAGMFA 182 (185)
T ss_pred ChHHHHHHHHHcCCCHHHeEE-EeCcHh-h-HHHHHHCCCeE
Confidence 445788999999999999988 889988 8 88887777653
No 452
>PRK04531 acetylglutamate kinase; Provisional
Probab=21.39 E-value=1.9e+02 Score=34.08 Aligned_cols=125 Identities=11% Similarity=0.152 Sum_probs=70.1
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCC
Q 001541 473 PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHH 552 (1057)
Q Consensus 473 ~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v 552 (1057)
|.+..|+-+|.-.-...++.++..+..+... .-.++||-|++++ +.++.++.|+.+...---.+
T Consensus 35 ~~~~~VIKiGG~~l~~~~~~l~~dla~L~~~--G~~~VlVHGggpq--------------I~~~l~~~gie~~~v~G~RV 98 (398)
T PRK04531 35 AERFAVIKVGGAVLRDDLEALASSLSFLQEV--GLTPIVVHGAGPQ--------------LDAELDAAGIEKETVNGLRV 98 (398)
T ss_pred CCcEEEEEEChHHhhcCHHHHHHHHHHHHHC--CCcEEEEECCCHH--------------HHHHHHHcCCCcEEECCEec
Confidence 4466777777633224577888888877542 2345567788865 56677788886644322344
Q ss_pred CCCcHHHHHHHhhcCCcEEEEcCCCCCCCHH--HHHHHHcCC-cEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHH
Q 001541 553 KQSDVPEIYRLAAKTKGVFINPAFIEPFGLT--LIEAAAHGL-PIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLK 629 (1057)
Q Consensus 553 ~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~--~lEAmA~G~-PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ 629 (1057)
..++..++...+. . -++. .++ +.+++..|. |||++ .|- ...|..+|- |.+.+|.+|..
T Consensus 99 Td~~tl~vv~~~l---~-~vn~------~lv~~I~~~L~~g~IPVlsp-lg~-------~~~G~~~Nv-naD~vA~~LA~ 159 (398)
T PRK04531 99 TSPEALAIVRKVF---Q-RSNL------DLVEAVESSLRAGSIPVIAS-LGE-------TPSGQILNI-NADVAANELVS 159 (398)
T ss_pred CCHHHHHHHHHHH---H-HHHH------HHHHHHHHHHHCCCEEEEeC-cEE-------CCCCcEEEE-CHHHHHHHHHH
Confidence 4555555555541 1 1111 221 445667775 66643 331 122433332 67788888776
Q ss_pred HHh
Q 001541 630 LVA 632 (1057)
Q Consensus 630 ll~ 632 (1057)
.|.
T Consensus 160 aL~ 162 (398)
T PRK04531 160 ALQ 162 (398)
T ss_pred HcC
Confidence 665
No 453
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=21.23 E-value=1.2e+02 Score=30.88 Aligned_cols=46 Identities=22% Similarity=0.260 Sum_probs=34.2
Q ss_pred hHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 790 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 790 ~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
-+.+.++|+.|+++ |+.++|+|+... ....++.+++. ..||.++++
T Consensus 89 ~pg~~~~L~~L~~~----g~~~~i~s~~~~--~~~~l~~~~l~-~~f~~~~~~ 134 (185)
T TIGR01990 89 LPGIKNLLDDLKKN----NIKIALASASKN--APTVLEKLGLI-DYFDAIVDP 134 (185)
T ss_pred CccHHHHHHHHHHC----CCeEEEEeCCcc--HHHHHHhcCcH-hhCcEEEeh
Confidence 45778999999986 899999998653 35678888884 235666653
No 454
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=20.79 E-value=74 Score=32.25 Aligned_cols=39 Identities=8% Similarity=0.061 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 001541 961 SQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 1002 (1057)
Q Consensus 961 g~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVA 1002 (1057)
....+.+++++|++++++++ +||+.. | +.+=+.+|...+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~-vgD~~~-d-i~aA~~~G~~~i 181 (183)
T TIGR01509 143 PDIYLLALKKLGLKPEECLF-VDDSPA-G-IEAAKAAGMHTV 181 (183)
T ss_pred HHHHHHHHHHcCCCcceEEE-EcCCHH-H-HHHHHHcCCEEE
Confidence 67889999999999999988 888887 8 888888886543
No 455
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=20.78 E-value=64 Score=33.60 Aligned_cols=41 Identities=15% Similarity=0.036 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEe
Q 001541 960 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 1003 (1057)
Q Consensus 960 Kg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAM 1003 (1057)
+....+++++++|+++++++. +||+.. | +..=..+|...+.
T Consensus 150 ~~~~~~~~~~~~~~~p~~~~~-vgD~~~-D-i~~A~~~G~~~i~ 190 (198)
T TIGR01428 150 APQVYQLALEALGVPPDEVLF-VASNPW-D-LGGAKKFGFKTAW 190 (198)
T ss_pred CHHHHHHHHHHhCCChhhEEE-EeCCHH-H-HHHHHHCCCcEEE
Confidence 367889999999999999988 888887 8 8888888876554
No 456
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=20.73 E-value=1e+03 Score=27.65 Aligned_cols=112 Identities=15% Similarity=0.170 Sum_probs=66.7
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCC----cccchhhHHHHHHHHHHHHHcCCCCCEEeC
Q 001541 474 RKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGI----DEMSSTSASVLLSVLKLIDKYDLYGQVAYP 549 (1057)
Q Consensus 474 ~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~----~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~ 549 (1057)
++++++..| +-.-.+-+.+++.+..+.+. ... ++-|+.... .....-..+-+..+.+..+++|+. .+.
T Consensus 99 ~~~l~vIAG-PCsIEs~eq~l~~A~~lk~~--g~~--~~r~g~~kpRtsp~sf~G~g~~gl~~L~~~~~e~Gl~---~~t 170 (352)
T PRK13396 99 NHPVVVVAG-PCSVENEEMIVETAKRVKAA--GAK--FLRGGAYKPRTSPYAFQGHGESALELLAAAREATGLG---IIT 170 (352)
T ss_pred CCeEEEEEe-CCcccCHHHHHHHHHHHHHc--CCC--EEEeeeecCCCCCcccCCchHHHHHHHHHHHHHcCCc---EEE
Confidence 445555555 55566778888888888653 122 222221111 111111133355566667777772 334
Q ss_pred CCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHc-CCcEEEcC
Q 001541 550 KHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH-GLPIVATK 598 (1057)
Q Consensus 550 g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~-G~PVVat~ 598 (1057)
-.++.+++..+...+ |++-++|. +-.+..++++++. |+||+.+.
T Consensus 171 ev~d~~~v~~~~~~~----d~lqIga~-~~~n~~LL~~va~t~kPVllk~ 215 (352)
T PRK13396 171 EVMDAADLEKIAEVA----DVIQVGAR-NMQNFSLLKKVGAQDKPVLLKR 215 (352)
T ss_pred eeCCHHHHHHHHhhC----CeEEECcc-cccCHHHHHHHHccCCeEEEeC
Confidence 455567777777777 99999984 4556677777765 99998765
No 457
>PHA02519 plasmid partition protein SopA; Reviewed
Probab=20.56 E-value=1.9e+02 Score=34.07 Aligned_cols=55 Identities=22% Similarity=0.208 Sum_probs=36.0
Q ss_pred CC-CChhhhhhhhhccc-------CCcceEEEEEecccccccCCcCCCCCCCCCcHH--HHHHHHHHHHhcCCCeeeEEE
Q 001541 146 PR-ISSVDAMETWISQQ-------KGKKLYIVLISIHGLIRGENMELGRDSDTGGQV--KYVVELARALGSMPGVYRVDL 215 (1057)
Q Consensus 146 ~~-~~~~~~~~~~~~~~-------~~~~m~I~~is~h~~~~~~~~~~gr~~d~GG~~--~~v~~LA~aLa~~Ggv~~V~v 215 (1057)
.| ..|++.+..|.+.- ...+++|+-|. ..-||+. +.+.+||.+|+.+| ++|-|
T Consensus 78 ~R~~ytl~eI~~lr~~~~~~~~r~~~~~~~vIav~---------------n~KGGVGKTTta~nLA~~LA~~G--~rVLl 140 (387)
T PHA02519 78 RRAGYTIDQISHMRDHFGNPNQRPDDKNPVVLAVM---------------SHKGGVYKTSSAVHTAQWLALQG--HRVLL 140 (387)
T ss_pred ccceEcHHHHHHHHHHhhccccCcCCCCceEEEEe---------------cCCCCCcHHHHHHHHHHHHHhCC--CcEEE
Confidence 45 47888877776322 12335655443 1244544 47889999999999 99998
Q ss_pred Ee
Q 001541 216 LT 217 (1057)
Q Consensus 216 it 217 (1057)
+=
T Consensus 141 ID 142 (387)
T PHA02519 141 IE 142 (387)
T ss_pred Ee
Confidence 84
No 458
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=20.47 E-value=1.3e+02 Score=31.37 Aligned_cols=47 Identities=11% Similarity=0.151 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 790 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 790 ~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
-+.+.++|+.|++. |+.++|+|+-+. .+...++.+++. ..||.++++
T Consensus 107 ~~g~~~~l~~L~~~----g~~~~i~Sn~~~-~~~~~l~~~~l~-~~fd~i~~s 153 (203)
T TIGR02252 107 YPDAIKLLKDLRER----GLILGVISNFDS-RLRGLLEALGLL-EYFDFVVTS 153 (203)
T ss_pred CcCHHHHHHHHHHC----CCEEEEEeCCch-hHHHHHHHCCcH-HhcceEEee
Confidence 45778899999886 899999998765 457888888873 235666653
No 459
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=20.39 E-value=66 Score=39.09 Aligned_cols=43 Identities=14% Similarity=0.244 Sum_probs=33.4
Q ss_pred CCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCC
Q 001541 956 VLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKG 1005 (1057)
Q Consensus 956 ~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgN 1005 (1057)
.|..|..+|+ +.+|.+... ++ .||+.+ | .+||+.++.++++..
T Consensus 173 ~Ge~Kv~rl~---~~~g~~~~~-~a-YgDS~s-D-~plL~~a~e~y~V~~ 215 (497)
T PLN02177 173 VGDHKRDAVL---KEFGDALPD-LG-LGDRET-D-HDFMSICKEGYMVPR 215 (497)
T ss_pred ccHHHHHHHH---HHhCCCCce-EE-EECCcc-H-HHHHHhCCccEEeCC
Confidence 3444888887 556766655 56 778888 8 999999999999986
No 460
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=20.35 E-value=2.2e+02 Score=27.80 Aligned_cols=55 Identities=13% Similarity=0.105 Sum_probs=41.2
Q ss_pred ceEEEEEecCCCC------------CcchHHHHHHHHHHHhhhcCCCeEEEEEC-CCCHHHHHHHHHhCCCC
Q 001541 774 KHIFVISVDCDST------------TGLLDATKKICEAVEKERTEGSIGFILST-SMTISEIHSFLVSGHLS 832 (1057)
Q Consensus 774 kkLi~~DiDGTL~------------~~i~~~t~~al~~l~~~~~~~gi~~vIaT-GR~~~~i~~~l~~lgl~ 832 (1057)
.+++.+++|+++. -.+=+..+..|..|+++ |+..++|| +..+.-+.+.|+.+.+.
T Consensus 18 P~~vdthl~~pfkP~k~~~g~~g~e~~fY~Di~rIL~dLk~~----GVtl~~ASRt~ap~iA~q~L~~fkvk 85 (144)
T KOG4549|consen 18 PRLVDTHLDYPFKPFKCECGSKGEEMIFYDDIRRILVDLKKL----GVTLIHASRTMAPQIASQGLETFKVK 85 (144)
T ss_pred eEEEEecccccccccccCcccCcceeeeccchhHHHHHHHhc----CcEEEEecCCCCHHHHHHHHHHhccC
Confidence 3588899999982 12335677889999987 89877776 55677788899988874
No 461
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=20.24 E-value=57 Score=39.24 Aligned_cols=39 Identities=15% Similarity=0.233 Sum_probs=30.6
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 1002 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVA 1002 (1057)
.|-..+...+++++ ++++++ +||+.+ | +.+-+.+|..++
T Consensus 386 ~kP~~~~~al~~l~--~~~~v~-VGDs~~-D-i~aAk~AG~~~I 424 (459)
T PRK06698 386 NKSDLVKSILNKYD--IKEAAV-VGDRLS-D-INAAKDNGLIAI 424 (459)
T ss_pred CCcHHHHHHHHhcC--cceEEE-EeCCHH-H-HHHHHHCCCeEE
Confidence 45667888888765 578888 888888 9 999999997544
No 462
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=20.21 E-value=1e+02 Score=33.02 Aligned_cols=54 Identities=13% Similarity=0.020 Sum_probs=35.4
Q ss_pred CcceEEEEEecCCC---CCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 772 RRKHIFVISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL---~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
...++++||||-|| ...+....++.|+..-.. ++.|..--.......+.+..|+
T Consensus 13 ~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~e------klgi~~e~a~~L~~~~yk~YG~ 69 (244)
T KOG3109|consen 13 PNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVE------KLGISEEEAEELRESLYKEYGL 69 (244)
T ss_pred ccceEEEEecccccccCchhHHHHHHHHHHHHHHH------HhCCChhhhHHHHHHHHHHHhH
Confidence 36789999999999 356777777666665443 2544444444445556666665
Done!