Query 001544
Match_columns 1057
No_of_seqs 1056 out of 6823
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 03:29:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001544.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001544hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 2E-115 5E-120 1122.9 67.5 917 25-1050 27-954 (968)
2 PLN00113 leucine-rich repeat r 100.0 2.2E-61 4.7E-66 621.9 32.0 518 95-694 69-588 (968)
3 KOG1187 Serine/threonine prote 100.0 2.5E-49 5.5E-54 440.6 24.9 289 755-1049 61-354 (361)
4 KOG0581 Mitogen-activated prot 100.0 2.2E-45 4.8E-50 381.9 17.8 253 771-1044 81-336 (364)
5 KOG0192 Tyrosine kinase specif 100.0 9.3E-45 2E-49 400.1 21.9 257 772-1052 44-308 (362)
6 KOG0575 Polo-like serine/threo 100.0 2.9E-44 6.3E-49 394.8 19.6 248 769-1043 18-269 (592)
7 KOG0197 Tyrosine kinases [Sign 100.0 1.4E-44 3E-49 394.4 15.0 254 771-1049 208-463 (468)
8 KOG0615 Serine/threonine prote 100.0 3.3E-44 7.1E-49 374.4 14.2 253 769-1044 172-438 (475)
9 KOG0595 Serine/threonine-prote 100.0 6.7E-43 1.5E-47 365.8 19.9 199 768-973 9-216 (429)
10 KOG0591 NIMA (never in mitosis 100.0 2.7E-44 5.9E-49 356.1 7.6 255 769-1045 19-283 (375)
11 KOG0593 Predicted protein kina 100.0 4.7E-43 1E-47 350.8 14.7 267 769-1043 2-284 (396)
12 KOG0472 Leucine-rich repeat pr 100.0 3.4E-46 7.4E-51 385.9 -12.0 493 73-672 47-544 (565)
13 KOG1026 Nerve growth factor re 100.0 5.8E-42 1.3E-46 391.6 16.1 259 769-1050 486-765 (774)
14 KOG0193 Serine/threonine prote 100.0 8.2E-42 1.8E-46 372.7 15.8 262 768-1051 391-657 (678)
15 KOG0598 Ribosomal protein S6 k 100.0 2.8E-41 6E-46 351.5 14.8 250 767-1042 23-280 (357)
16 KOG0659 Cdk activating kinase 100.0 7.3E-41 1.6E-45 330.1 16.8 265 769-1043 2-281 (318)
17 KOG0600 Cdc2-related protein k 100.0 4.1E-41 8.9E-46 360.0 15.9 267 769-1043 117-400 (560)
18 KOG0578 p21-activated serine/t 100.0 4.2E-41 9.1E-46 367.0 15.8 250 769-1043 273-523 (550)
19 KOG0661 MAPK related serine/th 100.0 9.1E-42 2E-46 362.3 9.3 267 768-1044 9-292 (538)
20 KOG0198 MEKK and related serin 100.0 9E-41 2E-45 356.2 16.3 258 769-1047 17-280 (313)
21 KOG0592 3-phosphoinositide-dep 100.0 1.6E-40 3.4E-45 358.4 16.1 254 766-1044 70-339 (604)
22 KOG0196 Tyrosine kinase, EPH ( 100.0 3E-41 6.4E-46 376.1 9.6 271 756-1049 607-893 (996)
23 KOG0582 Ste20-like serine/thre 100.0 1.6E-39 3.4E-44 342.6 21.0 262 768-1043 25-293 (516)
24 KOG4721 Serine/threonine prote 100.0 1.7E-40 3.6E-45 356.5 12.5 242 774-1049 129-370 (904)
25 KOG4194 Membrane glycoprotein 100.0 4.1E-41 8.9E-46 362.9 7.1 365 242-637 79-446 (873)
26 KOG0597 Serine-threonine prote 100.0 1.7E-39 3.6E-44 349.5 15.2 248 769-1044 2-252 (808)
27 KOG4194 Membrane glycoprotein 100.0 1.4E-40 3E-45 358.9 6.9 395 243-668 54-453 (873)
28 KOG1095 Protein tyrosine kinas 100.0 1.8E-39 3.9E-44 385.1 16.0 262 770-1054 693-968 (1025)
29 cd05102 PTKc_VEGFR3 Catalytic 100.0 9.3E-39 2E-43 362.0 21.1 260 768-1049 6-336 (338)
30 KOG0583 Serine/threonine prote 100.0 9.9E-39 2.1E-43 356.4 19.6 250 767-1043 15-275 (370)
31 KOG0588 Serine/threonine prote 100.0 3.1E-39 6.6E-44 355.3 14.8 248 769-1044 12-264 (786)
32 KOG0580 Serine/threonine prote 100.0 1.7E-39 3.7E-44 316.0 10.9 249 768-1044 21-274 (281)
33 KOG0660 Mitogen-activated prot 100.0 5.8E-39 1.3E-43 332.5 15.2 272 766-1043 19-310 (359)
34 KOG0194 Protein tyrosine kinas 100.0 4.4E-39 9.6E-44 358.0 15.3 259 768-1050 156-423 (474)
35 KOG0201 Serine/threonine prote 100.0 1E-39 2.3E-44 344.3 8.6 250 768-1043 12-263 (467)
36 KOG0663 Protein kinase PITSLRE 100.0 1E-38 2.3E-43 324.1 15.4 267 768-1043 75-361 (419)
37 PHA02988 hypothetical protein; 100.0 6.2E-38 1.4E-42 344.9 21.3 247 774-1049 25-281 (283)
38 KOG3653 Transforming growth fa 100.0 1.1E-37 2.5E-42 330.9 22.1 275 770-1050 211-506 (534)
39 KOG0605 NDR and related serine 100.0 2.9E-38 6.2E-43 341.8 17.6 255 767-1043 139-445 (550)
40 KOG0472 Leucine-rich repeat pr 100.0 3.5E-42 7.5E-47 356.3 -12.9 481 72-664 69-561 (565)
41 KOG0033 Ca2+/calmodulin-depend 100.0 8.4E-40 1.8E-44 317.5 3.9 253 768-1044 10-268 (355)
42 KOG0616 cAMP-dependent protein 100.0 7.4E-38 1.6E-42 313.4 17.8 236 769-1035 44-284 (355)
43 cd05096 PTKc_DDR1 Catalytic do 100.0 1.3E-37 2.8E-42 347.1 21.2 262 769-1046 5-304 (304)
44 KOG0585 Ca2+/calmodulin-depend 100.0 6.2E-38 1.4E-42 332.3 16.0 257 766-1045 94-374 (576)
45 KOG2345 Serine/threonine prote 100.0 3.5E-38 7.5E-43 308.0 12.9 263 767-1047 19-300 (302)
46 cd05104 PTKc_Kit Catalytic dom 100.0 1.5E-37 3.3E-42 355.5 20.3 258 768-1047 34-374 (375)
47 KOG1094 Discoidin domain recep 100.0 3.1E-38 6.7E-43 341.0 13.1 263 769-1047 538-804 (807)
48 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.1E-37 4.6E-42 338.2 20.0 255 769-1047 5-265 (266)
49 cd05106 PTKc_CSF-1R Catalytic 100.0 1.4E-37 2.9E-42 355.5 18.8 259 768-1048 37-373 (374)
50 cd05631 STKc_GRK4 Catalytic do 100.0 2.3E-37 5E-42 341.4 19.7 250 771-1043 2-261 (285)
51 cd07848 STKc_CDKL5 Catalytic d 100.0 4.3E-37 9.4E-42 340.1 21.4 269 769-1043 1-284 (287)
52 KOG0658 Glycogen synthase kina 100.0 2.9E-38 6.4E-43 327.9 11.2 262 770-1043 25-306 (364)
53 cd07871 STKc_PCTAIRE3 Catalyti 100.0 4.3E-37 9.4E-42 339.8 20.2 269 768-1043 4-285 (288)
54 cd05612 STKc_PRKX_like Catalyt 100.0 1.6E-37 3.6E-42 343.5 16.7 246 769-1044 1-255 (291)
55 cd05571 STKc_PKB Catalytic dom 100.0 2.2E-37 4.8E-42 347.6 17.3 242 775-1043 1-251 (323)
56 KOG0611 Predicted serine/threo 100.0 2.2E-37 4.8E-42 320.0 15.6 248 768-1044 52-304 (668)
57 cd06649 PKc_MEK2 Catalytic dom 100.0 2E-36 4.3E-41 341.2 24.4 265 768-1044 4-302 (331)
58 PF07714 Pkinase_Tyr: Protein 100.0 1.2E-37 2.6E-42 338.4 14.0 249 773-1044 3-259 (259)
59 cd05048 PTKc_Ror Catalytic Dom 100.0 7.8E-37 1.7E-41 337.3 20.5 256 769-1047 5-283 (283)
60 cd05108 PTKc_EGFR Catalytic do 100.0 5.3E-37 1.2E-41 343.9 19.4 258 769-1050 7-271 (316)
61 cd05093 PTKc_TrkB Catalytic do 100.0 7.7E-37 1.7E-41 338.0 20.4 261 769-1052 5-284 (288)
62 cd05105 PTKc_PDGFR_alpha Catal 100.0 9.7E-37 2.1E-41 349.3 21.7 259 768-1048 36-398 (400)
63 KOG4257 Focal adhesion tyrosin 100.0 2.1E-37 4.5E-42 336.1 15.1 255 770-1049 390-651 (974)
64 cd05114 PTKc_Tec_Rlk Catalytic 100.0 7.3E-37 1.6E-41 332.1 19.5 251 769-1044 4-255 (256)
65 KOG0594 Protein kinase PCTAIRE 100.0 4.6E-37 1E-41 320.5 16.9 271 769-1049 11-310 (323)
66 cd05033 PTKc_EphR Catalytic do 100.0 1.3E-36 2.8E-41 332.2 21.3 256 769-1047 4-265 (266)
67 KOG0589 Serine/threonine prote 100.0 1.4E-37 3.1E-42 339.1 12.9 251 768-1043 3-258 (426)
68 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 7.1E-37 1.5E-41 345.5 19.1 251 769-1043 1-257 (333)
69 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.1E-36 2.5E-41 339.2 20.5 270 768-1043 4-288 (303)
70 PTZ00263 protein kinase A cata 100.0 3.2E-37 6.9E-42 347.2 15.9 245 769-1043 18-271 (329)
71 KOG0618 Serine/threonine phosp 100.0 1.5E-39 3.2E-44 370.0 -3.6 507 76-664 3-510 (1081)
72 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.7E-36 3.7E-41 343.8 20.7 267 770-1043 1-290 (338)
73 KOG1989 ARK protein kinase fam 100.0 1.2E-36 2.6E-41 350.3 19.3 257 769-1049 37-313 (738)
74 cd05072 PTKc_Lyn Catalytic dom 100.0 1.5E-36 3.3E-41 330.7 19.1 255 768-1047 5-261 (261)
75 cd05595 STKc_PKB_beta Catalyti 100.0 9.8E-37 2.1E-41 342.3 18.0 242 775-1043 1-251 (323)
76 cd05054 PTKc_VEGFR Catalytic d 100.0 1.8E-36 3.8E-41 341.6 20.2 259 769-1049 7-335 (337)
77 cd05593 STKc_PKB_gamma Catalyt 100.0 1.4E-36 3E-41 341.6 18.5 242 775-1043 1-251 (328)
78 cd05111 PTK_HER3 Pseudokinase 100.0 3.6E-36 7.8E-41 330.9 21.3 260 769-1052 7-273 (279)
79 KOG0599 Phosphorylase kinase g 100.0 3.9E-37 8.5E-42 303.3 12.0 253 768-1044 16-284 (411)
80 PTZ00267 NIMA-related protein 100.0 1.9E-36 4.2E-41 356.8 20.1 251 770-1043 68-323 (478)
81 KOG0694 Serine/threonine prote 100.0 1.1E-36 2.5E-41 338.6 16.9 242 768-1037 367-613 (694)
82 cd05084 PTKc_Fes Catalytic dom 100.0 4E-36 8.6E-41 325.6 20.9 248 775-1045 1-251 (252)
83 cd05585 STKc_YPK1_like Catalyt 100.0 1.2E-36 2.6E-41 340.1 17.3 240 777-1043 1-247 (312)
84 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.4E-36 2.9E-41 331.1 17.2 256 767-1047 4-261 (261)
85 cd05094 PTKc_TrkC Catalytic do 100.0 3.5E-36 7.7E-41 333.3 20.7 259 769-1050 5-285 (291)
86 PTZ00426 cAMP-dependent protei 100.0 1.8E-36 4E-41 341.4 18.7 246 768-1043 29-284 (340)
87 cd05049 PTKc_Trk Catalytic dom 100.0 2.3E-36 5E-41 333.0 19.0 255 769-1046 5-280 (280)
88 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2.1E-36 4.6E-41 328.3 18.3 252 769-1045 4-256 (256)
89 KOG0574 STE20-like serine/thre 100.0 2.6E-38 5.6E-43 315.1 2.6 250 770-1044 34-284 (502)
90 cd06650 PKc_MEK1 Catalytic dom 100.0 5.5E-36 1.2E-40 337.5 22.0 267 768-1044 4-300 (333)
91 cd05090 PTKc_Ror1 Catalytic do 100.0 5.5E-36 1.2E-40 330.4 21.5 255 769-1046 5-282 (283)
92 cd08228 STKc_Nek6 Catalytic do 100.0 9.2E-36 2E-40 325.8 23.0 258 769-1048 2-266 (267)
93 cd05068 PTKc_Frk_like Catalyti 100.0 4.4E-36 9.6E-41 327.0 20.4 255 768-1047 5-261 (261)
94 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 6.7E-36 1.4E-40 330.0 22.0 268 769-1048 4-284 (284)
95 PHA03212 serine/threonine kina 100.0 7.4E-36 1.6E-40 342.1 23.1 264 768-1043 91-376 (391)
96 cd05062 PTKc_IGF-1R Catalytic 100.0 3.1E-36 6.8E-41 331.3 18.8 257 767-1046 4-277 (277)
97 cd05601 STKc_CRIK Catalytic do 100.0 9.8E-37 2.1E-41 344.0 15.1 253 769-1043 1-263 (330)
98 cd05052 PTKc_Abl Catalytic dom 100.0 4.9E-36 1.1E-40 327.0 20.1 254 769-1047 6-262 (263)
99 cd05059 PTKc_Tec_like Catalyti 100.0 4.1E-36 9E-41 326.2 18.9 250 770-1044 5-255 (256)
100 cd05599 STKc_NDR_like Catalyti 100.0 2.1E-36 4.6E-41 346.3 17.4 253 769-1043 1-296 (364)
101 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 9.3E-36 2E-40 328.6 22.0 266 772-1048 7-282 (283)
102 cd05628 STKc_NDR1 Catalytic do 100.0 5.4E-36 1.2E-40 342.1 20.6 254 769-1043 1-293 (363)
103 cd05626 STKc_LATS2 Catalytic d 100.0 4.4E-36 9.6E-41 345.0 19.9 253 770-1043 2-305 (381)
104 KOG4279 Serine/threonine prote 100.0 8.5E-37 1.8E-41 334.4 13.0 245 775-1042 581-831 (1226)
105 PTZ00283 serine/threonine prot 100.0 2.8E-36 6E-41 355.1 18.4 255 766-1043 29-297 (496)
106 cd06646 STKc_MAP4K5 Catalytic 100.0 7.2E-36 1.6E-40 326.6 20.4 254 769-1044 9-266 (267)
107 PLN00034 mitogen-activated pro 100.0 2.9E-36 6.4E-41 343.1 18.0 247 770-1043 75-328 (353)
108 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.7E-36 3.6E-41 345.6 15.9 253 769-1043 1-285 (350)
109 cd05584 STKc_p70S6K Catalytic 100.0 3.3E-36 7.2E-41 338.2 17.9 242 775-1043 2-256 (323)
110 cd05629 STKc_NDR_like_fungal C 100.0 3.2E-36 7E-41 346.0 17.9 253 769-1043 1-305 (377)
111 cd05036 PTKc_ALK_LTK Catalytic 100.0 6.5E-36 1.4E-40 328.7 19.1 256 768-1046 5-277 (277)
112 cd05589 STKc_PKN Catalytic dom 100.0 4E-36 8.7E-41 337.8 17.7 245 771-1043 1-257 (324)
113 cd05594 STKc_PKB_alpha Catalyt 100.0 2.1E-36 4.5E-41 340.3 15.4 242 775-1043 1-252 (325)
114 cd05109 PTKc_HER2 Catalytic do 100.0 8.7E-36 1.9E-40 328.1 19.9 260 768-1051 6-272 (279)
115 cd05053 PTKc_FGFR Catalytic do 100.0 4.9E-36 1.1E-40 332.8 18.1 259 767-1048 10-292 (293)
116 cd05092 PTKc_TrkA Catalytic do 100.0 6.9E-36 1.5E-40 328.9 19.1 254 770-1046 6-280 (280)
117 cd07862 STKc_CDK6 Catalytic do 100.0 1.2E-35 2.6E-40 329.0 21.2 267 769-1043 1-287 (290)
118 cd05596 STKc_ROCK Catalytic do 100.0 3.2E-36 6.9E-41 343.9 17.0 254 768-1044 42-305 (370)
119 cd05089 PTKc_Tie1 Catalytic do 100.0 1.2E-35 2.6E-40 329.9 21.1 259 769-1053 2-281 (297)
120 cd05045 PTKc_RET Catalytic dom 100.0 2.5E-35 5.3E-40 326.4 23.4 257 770-1049 1-288 (290)
121 cd05035 PTKc_Axl_like Catalyti 100.0 1.5E-35 3.2E-40 325.3 21.5 254 771-1047 1-272 (273)
122 cd05098 PTKc_FGFR1 Catalytic d 100.0 9.6E-36 2.1E-40 332.4 20.0 259 769-1050 18-302 (307)
123 cd05605 STKc_GRK4_like Catalyt 100.0 9.2E-36 2E-40 328.7 19.3 251 770-1043 1-261 (285)
124 cd05043 PTK_Ryk Pseudokinase d 100.0 1E-35 2.3E-40 327.8 19.6 260 768-1050 5-279 (280)
125 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.3E-35 2.9E-40 330.9 20.3 260 768-1050 14-299 (304)
126 cd05115 PTKc_Zap-70 Catalytic 100.0 1.9E-35 4.1E-40 321.0 21.0 247 777-1047 3-255 (257)
127 cd05075 PTKc_Axl Catalytic dom 100.0 1.9E-35 4.2E-40 324.2 21.2 254 771-1047 1-271 (272)
128 cd05065 PTKc_EphR_B Catalytic 100.0 1.4E-35 3.1E-40 324.6 20.1 255 770-1047 5-268 (269)
129 cd05621 STKc_ROCK2 Catalytic d 100.0 6.3E-36 1.4E-40 341.0 17.9 254 767-1043 41-304 (370)
130 cd05614 STKc_MSK2_N N-terminal 100.0 9.1E-36 2E-40 336.5 19.0 252 770-1043 1-267 (332)
131 cd05590 STKc_nPKC_eta Catalyti 100.0 5.3E-36 1.1E-40 335.8 16.9 242 775-1043 1-253 (320)
132 cd05618 STKc_aPKC_iota Catalyt 100.0 6E-36 1.3E-40 336.6 17.2 248 775-1043 1-262 (329)
133 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.1E-35 2.4E-40 336.7 19.5 260 769-1050 7-342 (343)
134 cd05588 STKc_aPKC Catalytic do 100.0 6.8E-36 1.5E-40 336.3 17.5 248 775-1043 1-262 (329)
135 cd05066 PTKc_EphR_A Catalytic 100.0 1.8E-35 4E-40 323.3 20.4 256 769-1047 4-266 (267)
136 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.6E-35 3.5E-40 331.0 20.3 268 769-1043 6-286 (309)
137 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.7E-35 3.7E-40 322.2 20.0 252 769-1046 6-259 (260)
138 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.5E-35 3.3E-40 339.2 20.4 258 769-1048 37-400 (401)
139 cd05071 PTKc_Src Catalytic dom 100.0 2.2E-35 4.8E-40 321.5 20.8 253 769-1047 6-260 (262)
140 cd05097 PTKc_DDR_like Catalyti 100.0 2E-35 4.4E-40 327.9 20.8 262 769-1046 5-295 (295)
141 cd05091 PTKc_Ror2 Catalytic do 100.0 8.7E-36 1.9E-40 328.9 17.7 254 770-1046 6-282 (283)
142 KOG0032 Ca2+/calmodulin-depend 100.0 1.7E-35 3.7E-40 329.7 19.9 251 768-1043 34-293 (382)
143 cd05592 STKc_nPKC_theta_delta 100.0 8.3E-36 1.8E-40 333.6 17.5 242 775-1043 1-248 (316)
144 cd05587 STKc_cPKC Catalytic do 100.0 9.6E-36 2.1E-40 334.7 18.1 247 770-1043 1-257 (324)
145 KOG4278 Protein tyrosine kinas 100.0 2.6E-36 5.6E-41 326.6 12.8 255 769-1048 267-524 (1157)
146 PRK13184 pknD serine/threonine 100.0 2.7E-35 5.9E-40 353.2 23.0 259 769-1048 2-291 (932)
147 cd05608 STKc_GRK1 Catalytic do 100.0 2.1E-35 4.6E-40 324.8 20.4 245 777-1043 1-257 (280)
148 cd05591 STKc_nPKC_epsilon Cata 100.0 7.2E-36 1.6E-40 335.3 16.8 242 775-1043 1-254 (321)
149 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 4.5E-35 9.8E-40 320.3 22.8 258 769-1048 2-266 (267)
150 cd05051 PTKc_DDR Catalytic dom 100.0 2.9E-35 6.3E-40 327.1 21.6 263 768-1046 4-296 (296)
151 cd05625 STKc_LATS1 Catalytic d 100.0 9.9E-36 2.1E-40 342.6 18.3 252 770-1043 2-305 (382)
152 cd06625 STKc_MEKK3_like Cataly 100.0 3.8E-35 8.2E-40 320.1 22.0 252 769-1043 2-260 (263)
153 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.6E-35 5.6E-40 322.4 20.8 256 769-1047 5-267 (268)
154 cd05055 PTKc_PDGFR Catalytic d 100.0 1.9E-35 4.1E-40 328.8 20.0 257 769-1047 35-301 (302)
155 cd05598 STKc_LATS Catalytic do 100.0 5.2E-36 1.1E-40 344.4 15.9 253 769-1043 1-301 (376)
156 cd05085 PTKc_Fer Catalytic dom 100.0 2.8E-35 6.1E-40 318.5 20.7 247 775-1045 1-249 (250)
157 KOG2052 Activin A type IB rece 100.0 2.8E-35 6.1E-40 310.3 19.9 265 769-1049 211-505 (513)
158 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 3.3E-35 7.1E-40 324.4 21.5 269 770-1047 5-283 (284)
159 cd08529 STKc_FA2-like Catalyti 100.0 3.3E-35 7.2E-40 319.2 21.2 249 770-1043 1-253 (256)
160 cd06654 STKc_PAK1 Catalytic do 100.0 2.6E-35 5.7E-40 326.8 20.8 250 769-1043 20-270 (296)
161 KOG0610 Putative serine/threon 100.0 1.4E-35 3E-40 310.7 17.3 252 770-1043 78-392 (459)
162 cd06613 STKc_MAP4K3_like Catal 100.0 6.3E-35 1.4E-39 318.2 23.2 254 769-1043 3-260 (262)
163 cd06624 STKc_ASK Catalytic dom 100.0 3.8E-35 8.2E-40 321.1 21.4 255 766-1043 5-265 (268)
164 cd05061 PTKc_InsR Catalytic do 100.0 2.4E-35 5.3E-40 326.0 20.1 258 767-1047 4-278 (288)
165 KOG0596 Dual specificity; seri 100.0 7E-36 1.5E-40 322.1 15.1 254 768-1043 360-627 (677)
166 cd05607 STKc_GRK7 Catalytic do 100.0 3.1E-35 6.7E-40 323.0 20.7 245 777-1043 1-250 (277)
167 cd05067 PTKc_Lck_Blk Catalytic 100.0 2.7E-35 5.8E-40 320.7 19.9 253 768-1046 5-259 (260)
168 cd06643 STKc_SLK Catalytic dom 100.0 3.6E-35 7.8E-40 323.8 21.2 251 771-1044 7-263 (282)
169 cd05039 PTKc_Csk_like Catalyti 100.0 4.1E-35 8.9E-40 318.5 21.3 250 768-1047 5-256 (256)
170 cd07853 STKc_NLK Catalytic dom 100.0 2.9E-35 6.2E-40 337.5 21.0 267 770-1043 1-288 (372)
171 cd05619 STKc_nPKC_theta Cataly 100.0 1.5E-35 3.3E-40 331.3 18.1 242 775-1043 1-248 (316)
172 cd00192 PTKc Catalytic domain 100.0 3.6E-35 7.7E-40 320.0 20.4 248 775-1045 1-262 (262)
173 cd05570 STKc_PKC Catalytic dom 100.0 1.4E-35 2.9E-40 332.4 17.5 242 775-1043 1-252 (318)
174 cd05088 PTKc_Tie2 Catalytic do 100.0 2.8E-35 6E-40 327.8 19.8 257 768-1050 6-283 (303)
175 cd05056 PTKc_FAK Catalytic dom 100.0 4E-35 8.6E-40 321.3 20.8 257 769-1050 6-268 (270)
176 cd08229 STKc_Nek7 Catalytic do 100.0 4E-35 8.6E-40 320.7 20.7 258 769-1048 2-266 (267)
177 cd05622 STKc_ROCK1 Catalytic d 100.0 1.8E-35 4E-40 337.6 18.7 258 764-1044 38-305 (371)
178 cd05620 STKc_nPKC_delta Cataly 100.0 1.2E-35 2.5E-40 332.4 16.7 242 775-1043 1-248 (316)
179 cd06612 STKc_MST1_2 Catalytic 100.0 4.9E-35 1.1E-39 317.9 21.0 250 769-1043 3-253 (256)
180 cd05116 PTKc_Syk Catalytic dom 100.0 3.9E-35 8.5E-40 318.7 20.2 247 776-1047 2-255 (257)
181 cd05095 PTKc_DDR2 Catalytic do 100.0 4.6E-35 1E-39 325.2 21.2 262 769-1046 5-296 (296)
182 cd05616 STKc_cPKC_beta Catalyt 100.0 1.5E-35 3.3E-40 332.9 17.5 247 770-1043 1-257 (323)
183 cd05041 PTKc_Fes_like Catalyti 100.0 5E-35 1.1E-39 316.8 20.7 248 775-1045 1-250 (251)
184 cd05050 PTKc_Musk Catalytic do 100.0 3.1E-35 6.8E-40 325.3 19.5 256 768-1046 4-288 (288)
185 cd05099 PTKc_FGFR4 Catalytic d 100.0 4.5E-35 9.7E-40 328.0 20.9 260 769-1051 12-297 (314)
186 cd06644 STKc_STK10_LOK Catalyt 100.0 7.2E-35 1.6E-39 323.1 22.3 252 769-1043 12-269 (292)
187 cd05069 PTKc_Yes Catalytic dom 100.0 5.4E-35 1.2E-39 318.2 20.8 252 769-1046 6-259 (260)
188 cd06611 STKc_SLK_like Catalyti 100.0 3.1E-35 6.8E-40 323.9 19.0 252 769-1043 5-262 (280)
189 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.3E-34 2.8E-39 315.3 23.4 239 775-1044 1-261 (262)
190 cd05032 PTKc_InsR_like Catalyt 100.0 3.7E-35 7.9E-40 322.9 19.2 255 768-1045 5-276 (277)
191 cd07876 STKc_JNK2 Catalytic do 100.0 5.4E-35 1.2E-39 333.7 21.1 267 767-1044 19-316 (359)
192 cd05057 PTKc_EGFR_like Catalyt 100.0 5.1E-35 1.1E-39 322.0 20.1 260 769-1052 7-273 (279)
193 cd05597 STKc_DMPK_like Catalyt 100.0 4.9E-35 1.1E-39 329.7 20.4 255 769-1043 1-266 (331)
194 KOG0618 Serine/threonine phosp 100.0 3.8E-38 8.3E-43 358.5 -5.2 483 124-666 3-488 (1081)
195 cd05582 STKc_RSK_N N-terminal 100.0 7.4E-36 1.6E-40 334.9 13.3 238 775-1039 2-245 (318)
196 cd05082 PTKc_Csk Catalytic dom 100.0 5.3E-35 1.2E-39 317.5 19.7 248 769-1047 6-256 (256)
197 cd05040 PTKc_Ack_like Catalyti 100.0 8.5E-35 1.8E-39 316.2 21.2 248 775-1045 1-256 (257)
198 KOG0577 Serine/threonine prote 100.0 2.3E-36 5E-41 326.1 8.6 246 770-1044 27-279 (948)
199 PHA03211 serine/threonine kina 100.0 5.7E-35 1.2E-39 338.0 21.0 266 768-1043 168-455 (461)
200 cd08219 STKc_Nek3 Catalytic do 100.0 5.2E-35 1.1E-39 317.4 19.4 249 770-1043 1-252 (255)
201 KOG0199 ACK and related non-re 100.0 8.1E-36 1.7E-40 327.9 12.8 249 773-1045 114-370 (1039)
202 PF00069 Pkinase: Protein kina 100.0 3.2E-35 6.9E-40 320.1 17.5 253 771-1043 1-257 (260)
203 PTZ00036 glycogen synthase kin 100.0 5.7E-35 1.2E-39 340.2 20.6 264 768-1043 65-351 (440)
204 cd06645 STKc_MAP4K3 Catalytic 100.0 5E-35 1.1E-39 319.9 19.0 253 769-1043 9-265 (267)
205 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.9E-35 6.3E-40 330.9 17.5 248 775-1043 1-260 (327)
206 cd05034 PTKc_Src_like Catalyti 100.0 6.1E-35 1.3E-39 318.1 19.5 254 768-1046 5-260 (261)
207 cd05058 PTKc_Met_Ron Catalytic 100.0 8E-35 1.7E-39 317.4 20.4 251 775-1048 1-260 (262)
208 cd06619 PKc_MKK5 Catalytic dom 100.0 9.5E-35 2.1E-39 319.7 21.2 251 769-1044 1-254 (279)
209 cd06655 STKc_PAK2 Catalytic do 100.0 7E-35 1.5E-39 323.2 20.2 250 769-1043 19-269 (296)
210 cd05575 STKc_SGK Catalytic dom 100.0 2.2E-35 4.8E-40 331.7 16.4 237 775-1038 1-242 (323)
211 cd06615 PKc_MEK Catalytic doma 100.0 1.5E-34 3.2E-39 322.7 23.0 264 769-1044 1-288 (308)
212 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 4.9E-35 1.1E-39 323.2 18.9 266 770-1047 5-283 (284)
213 cd05100 PTKc_FGFR3 Catalytic d 100.0 6.9E-35 1.5E-39 329.4 20.5 259 769-1050 12-296 (334)
214 cd06656 STKc_PAK3 Catalytic do 100.0 7.8E-35 1.7E-39 323.2 20.4 251 768-1043 18-269 (297)
215 cd05627 STKc_NDR2 Catalytic do 100.0 2.3E-35 4.9E-40 336.7 16.5 253 769-1043 1-293 (360)
216 cd07873 STKc_PCTAIRE1 Catalyti 100.0 6E-35 1.3E-39 325.1 19.4 268 769-1043 6-286 (301)
217 cd05632 STKc_GRK5 Catalytic do 100.0 1E-34 2.2E-39 320.3 21.0 250 771-1043 2-261 (285)
218 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.4E-34 3E-39 317.1 21.9 238 776-1044 2-273 (274)
219 cd05112 PTKc_Itk Catalytic dom 100.0 7.3E-35 1.6E-39 316.5 19.5 251 769-1044 4-255 (256)
220 KOG1025 Epidermal growth facto 100.0 1.7E-35 3.7E-40 330.9 14.7 260 771-1054 698-964 (1177)
221 cd05110 PTKc_HER4 Catalytic do 100.0 6.2E-35 1.4E-39 325.1 19.3 258 769-1050 7-271 (303)
222 cd06640 STKc_MST4 Catalytic do 100.0 2.3E-34 5E-39 316.3 23.2 247 770-1043 5-253 (277)
223 cd06637 STKc_TNIK Catalytic do 100.0 4.7E-35 1E-39 321.1 17.6 252 767-1043 4-269 (272)
224 cd05615 STKc_cPKC_alpha Cataly 100.0 4.6E-35 1E-39 328.7 17.9 247 770-1043 1-257 (323)
225 cd05060 PTKc_Syk_like Catalyti 100.0 1.1E-34 2.5E-39 315.1 20.3 249 775-1048 1-256 (257)
226 PHA03207 serine/threonine kina 100.0 6.6E-35 1.4E-39 336.1 19.5 267 768-1044 91-376 (392)
227 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2E-34 4.4E-39 315.4 22.4 252 775-1045 1-268 (269)
228 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.4E-34 3E-39 328.4 21.6 268 764-1043 10-298 (343)
229 cd05630 STKc_GRK6 Catalytic do 100.0 1.2E-34 2.6E-39 319.7 20.4 250 771-1043 2-261 (285)
230 cd05047 PTKc_Tie Catalytic dom 100.0 1.5E-34 3.2E-39 316.6 20.8 248 775-1048 1-269 (270)
231 cd05623 STKc_MRCK_alpha Cataly 100.0 9.3E-35 2E-39 327.8 19.7 255 769-1043 1-266 (332)
232 KOG4717 Serine/threonine prote 100.0 4.8E-35 1E-39 311.1 16.1 247 770-1043 19-270 (864)
233 cd05073 PTKc_Hck Catalytic dom 100.0 1.7E-34 3.7E-39 314.3 20.8 253 768-1046 5-259 (260)
234 cd05602 STKc_SGK1 Catalytic do 100.0 3.6E-35 7.9E-40 330.2 15.9 240 775-1041 1-245 (325)
235 KOG0607 MAP kinase-interacting 100.0 4.6E-35 1E-39 294.9 14.8 272 760-1043 74-361 (463)
236 cd06631 STKc_YSK4 Catalytic do 100.0 1.7E-34 3.8E-39 315.3 20.7 252 770-1043 1-262 (265)
237 cd05624 STKc_MRCK_beta Catalyt 100.0 9.5E-35 2.1E-39 327.3 18.8 255 769-1043 1-266 (331)
238 cd07861 STKc_CDK1_euk Catalyti 100.0 2.3E-34 5E-39 318.0 21.4 268 770-1043 1-282 (285)
239 cd05044 PTKc_c-ros Catalytic d 100.0 1.2E-34 2.7E-39 317.3 19.0 249 775-1046 1-269 (269)
240 KOG0579 Ste20-like serine/thre 100.0 6.4E-36 1.4E-40 324.1 8.6 250 771-1043 34-289 (1187)
241 cd07874 STKc_JNK3 Catalytic do 100.0 9.9E-35 2.2E-39 331.1 18.9 267 766-1043 14-311 (355)
242 PTZ00284 protein kinase; Provi 100.0 2.2E-34 4.9E-39 339.5 22.4 269 764-1043 124-438 (467)
243 KOG0444 Cytoskeletal regulator 100.0 3.2E-37 6.9E-42 334.1 -1.8 371 92-643 4-375 (1255)
244 cd05604 STKc_SGK3 Catalytic do 100.0 3.6E-35 7.8E-40 330.2 14.7 238 775-1039 1-243 (325)
245 cd06609 STKc_MST3_like Catalyt 100.0 1.6E-34 3.5E-39 317.1 19.5 249 769-1043 1-251 (274)
246 cd07863 STKc_CDK4 Catalytic do 100.0 1.6E-34 3.5E-39 319.7 19.6 266 770-1043 1-285 (288)
247 cd06628 STKc_MAPKKK_Byr2_like 100.0 2E-34 4.4E-39 315.1 20.1 250 770-1043 1-264 (267)
248 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.9E-34 4.1E-39 318.8 20.0 253 769-1044 1-263 (286)
249 cd05603 STKc_SGK2 Catalytic do 100.0 5.6E-35 1.2E-39 328.2 15.9 237 775-1038 1-242 (321)
250 KOG0667 Dual-specificity tyros 100.0 8.2E-35 1.8E-39 324.6 16.7 194 770-973 187-390 (586)
251 cd08227 PK_STRAD_alpha Pseudok 100.0 2.3E-34 4.9E-39 324.2 20.5 272 773-1048 2-314 (327)
252 cd06651 STKc_MEKK3 Catalytic d 100.0 4.3E-34 9.3E-39 312.3 22.0 251 769-1043 2-261 (266)
253 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.4E-34 3E-39 318.3 18.1 248 770-1044 5-254 (277)
254 cd08221 STKc_Nek9 Catalytic do 100.0 3.6E-34 7.9E-39 311.0 21.2 250 770-1044 1-254 (256)
255 cd05042 PTKc_Aatyk Catalytic d 100.0 5E-34 1.1E-38 312.4 22.4 251 776-1045 2-268 (269)
256 cd06638 STKc_myosinIIIA Cataly 100.0 2E-34 4.4E-39 318.6 19.5 259 762-1044 11-284 (286)
257 cd07839 STKc_CDK5 Catalytic do 100.0 1.5E-34 3.3E-39 319.2 18.4 268 770-1043 1-281 (284)
258 PHA03209 serine/threonine kina 100.0 4.1E-34 8.9E-39 325.4 22.4 264 767-1043 64-351 (357)
259 cd08218 STKc_Nek1 Catalytic do 100.0 2.9E-34 6.2E-39 311.8 20.1 249 770-1043 1-253 (256)
260 cd07868 STKc_CDK8 Catalytic do 100.0 5.8E-34 1.3E-38 319.8 22.9 194 774-973 6-218 (317)
261 cd08223 STKc_Nek4 Catalytic do 100.0 4.4E-34 9.6E-39 310.6 21.3 249 770-1043 1-254 (257)
262 cd07875 STKc_JNK1 Catalytic do 100.0 2.2E-34 4.8E-39 329.3 19.9 266 767-1043 22-318 (364)
263 cd07847 STKc_CDKL1_4 Catalytic 100.0 4.6E-34 9.9E-39 315.8 21.5 268 769-1043 1-283 (286)
264 cd05046 PTK_CCK4 Pseudokinase 100.0 3.5E-34 7.6E-39 314.7 20.0 254 769-1045 5-274 (275)
265 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.8E-34 3.8E-39 318.6 17.6 265 769-1048 5-271 (284)
266 PTZ00266 NIMA-related protein 100.0 1.4E-34 2.9E-39 348.3 17.7 255 766-1043 10-295 (1021)
267 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 8.5E-35 1.8E-39 316.2 14.5 239 775-1044 1-257 (258)
268 smart00219 TyrKc Tyrosine kina 100.0 5.4E-34 1.2E-38 310.0 20.4 250 771-1044 1-258 (258)
269 cd06632 STKc_MEKK1_plant Catal 100.0 5.2E-34 1.1E-38 310.2 20.2 248 770-1043 1-255 (258)
270 cd06629 STKc_MAPKKK_Bck1_like 100.0 9.5E-34 2.1E-38 310.7 21.9 255 770-1043 2-269 (272)
271 cd06652 STKc_MEKK2 Catalytic d 100.0 1.1E-33 2.4E-38 308.9 22.1 251 769-1043 2-261 (265)
272 cd07832 STKc_CCRK Catalytic do 100.0 8.7E-34 1.9E-38 313.6 21.5 268 770-1043 1-282 (286)
273 cd06647 STKc_PAK_I Catalytic d 100.0 6.2E-34 1.4E-38 315.3 20.4 250 769-1043 19-269 (293)
274 cd06636 STKc_MAP4K4_6 Catalyti 100.0 5.5E-34 1.2E-38 314.4 19.8 259 760-1043 7-279 (282)
275 cd06639 STKc_myosinIIIB Cataly 100.0 5.6E-34 1.2E-38 315.8 19.9 259 761-1043 14-287 (291)
276 KOG0584 Serine/threonine prote 100.0 6.9E-35 1.5E-39 321.4 12.4 246 772-1043 43-296 (632)
277 cd06658 STKc_PAK5 Catalytic do 100.0 2.8E-34 6.1E-39 317.7 17.4 248 771-1043 24-272 (292)
278 cd05083 PTKc_Chk Catalytic dom 100.0 4E-34 8.6E-39 310.3 18.2 246 769-1046 6-253 (254)
279 cd07846 STKc_CDKL2_3 Catalytic 100.0 3.8E-34 8.3E-39 316.4 18.4 268 769-1043 1-283 (286)
280 cd06605 PKc_MAPKK Catalytic do 100.0 6.8E-34 1.5E-38 310.6 20.1 253 770-1043 2-257 (265)
281 cd08528 STKc_Nek10 Catalytic d 100.0 1E-33 2.3E-38 309.9 21.4 251 770-1045 1-268 (269)
282 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.2E-33 2.6E-38 309.0 21.9 257 769-1043 1-264 (267)
283 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 8.7E-34 1.9E-38 308.6 20.5 237 775-1044 1-258 (259)
284 cd05074 PTKc_Tyro3 Catalytic d 100.0 7.7E-34 1.7E-38 311.7 19.8 254 771-1047 1-272 (273)
285 cd06659 STKc_PAK6 Catalytic do 100.0 4.4E-34 9.6E-39 317.0 18.0 246 773-1043 25-271 (297)
286 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1E-33 2.2E-38 313.7 20.9 271 767-1043 3-288 (291)
287 cd07841 STKc_CDK7 Catalytic do 100.0 1.2E-33 2.6E-38 314.3 21.5 267 770-1043 1-282 (298)
288 cd07867 STKc_CDC2L6 Catalytic 100.0 1.9E-33 4.1E-38 315.8 23.1 193 775-973 7-218 (317)
289 cd05586 STKc_Sck1_like Catalyt 100.0 1.3E-34 2.8E-39 326.7 13.6 241 777-1043 1-253 (330)
290 cd07844 STKc_PCTAIRE_like Cata 100.0 8.2E-34 1.8E-38 314.5 19.8 270 768-1043 4-288 (291)
291 cd08220 STKc_Nek8 Catalytic do 100.0 1E-33 2.2E-38 307.5 19.6 248 770-1043 1-253 (256)
292 cd06630 STKc_MEKK1 Catalytic d 100.0 1.3E-33 2.9E-38 308.9 20.5 254 770-1043 1-264 (268)
293 cd07860 STKc_CDK2_3 Catalytic 100.0 1.5E-33 3.2E-38 311.4 20.8 267 770-1043 1-281 (284)
294 cd06641 STKc_MST3 Catalytic do 100.0 1.8E-33 3.9E-38 309.3 21.3 247 770-1043 5-253 (277)
295 cd06626 STKc_MEKK4 Catalytic d 100.0 2.8E-33 6.1E-38 305.6 22.2 253 770-1043 1-261 (264)
296 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 3.2E-33 6.9E-38 308.9 22.9 256 769-1043 1-266 (287)
297 cd06607 STKc_TAO Catalytic dom 100.0 2.4E-33 5.2E-38 313.1 22.0 248 768-1044 14-268 (307)
298 cd06648 STKc_PAK_II Catalytic 100.0 2E-33 4.4E-38 310.0 21.2 248 771-1043 21-269 (285)
299 cd06614 STKc_PAK Catalytic dom 100.0 2.2E-33 4.7E-38 310.3 21.4 254 767-1044 17-271 (286)
300 cd06608 STKc_myosinIII_like Ca 100.0 1.7E-33 3.6E-38 309.4 20.3 253 767-1043 4-272 (275)
301 KOG0666 Cyclin C-dependent kin 100.0 2.1E-34 4.5E-39 289.4 11.6 274 767-1044 22-338 (438)
302 cd06623 PKc_MAPKK_plant_like C 100.0 2.3E-33 5E-38 306.2 21.0 252 769-1043 1-256 (264)
303 cd08217 STKc_Nek2 Catalytic do 100.0 2.4E-33 5.1E-38 306.2 21.0 252 770-1043 1-262 (265)
304 cd05122 PKc_STE Catalytic doma 100.0 4E-33 8.7E-38 301.9 22.4 250 770-1043 1-251 (253)
305 cd05086 PTKc_Aatyk2 Catalytic 100.0 2.5E-33 5.3E-38 306.5 20.9 251 776-1045 2-267 (268)
306 cd05609 STKc_MAST Catalytic do 100.0 2E-33 4.4E-38 313.3 20.6 254 769-1044 1-271 (305)
307 cd05580 STKc_PKA Catalytic dom 100.0 1.4E-33 3E-38 312.3 19.1 245 769-1043 1-254 (290)
308 cd06617 PKc_MKK3_6 Catalytic d 100.0 2.5E-33 5.4E-38 309.4 20.6 250 769-1043 1-261 (283)
309 cd07835 STKc_CDK1_like Catalyt 100.0 2.8E-33 6E-38 309.0 20.4 266 771-1043 1-280 (283)
310 cd05578 STKc_Yank1 Catalytic d 100.0 8.2E-34 1.8E-38 308.6 15.9 248 770-1042 1-254 (258)
311 cd07833 STKc_CDKL Catalytic do 100.0 1.8E-33 4E-38 311.3 18.9 269 769-1043 1-285 (288)
312 cd05574 STKc_phototropin_like 100.0 2.8E-33 6.1E-38 314.1 20.4 253 769-1043 1-289 (316)
313 cd06917 STKc_NAK1_like Catalyt 100.0 3.2E-33 7E-38 307.4 20.2 248 770-1043 2-255 (277)
314 cd07843 STKc_CDC2L1 Catalytic 100.0 3.4E-33 7.3E-38 309.9 20.1 268 769-1043 5-290 (293)
315 cd06606 STKc_MAPKKK Catalytic 100.0 6.7E-33 1.5E-37 301.5 21.4 252 770-1043 1-257 (260)
316 cd06635 STKc_TAO1 Catalytic do 100.0 6.9E-33 1.5E-37 310.7 22.0 246 771-1045 27-279 (317)
317 KOG4645 MAPKKK (MAP kinase kin 100.0 4E-35 8.7E-40 344.4 3.7 254 767-1043 1233-1494(1509)
318 cd07831 STKc_MOK Catalytic dom 100.0 6.1E-33 1.3E-37 306.1 21.0 263 771-1043 1-279 (282)
319 KOG1035 eIF-2alpha kinase GCN2 100.0 1E-33 2.2E-38 331.3 15.0 253 768-1042 478-870 (1351)
320 cd07836 STKc_Pho85 Catalytic d 100.0 7.3E-33 1.6E-37 305.8 21.1 267 770-1043 1-281 (284)
321 PHA03390 pk1 serine/threonine- 100.0 9.2E-33 2E-37 301.5 21.5 250 762-1043 7-262 (267)
322 cd07845 STKc_CDK10 Catalytic d 100.0 4.1E-33 9E-38 311.6 19.2 269 768-1043 6-290 (309)
323 KOG0983 Mitogen-activated prot 100.0 5.3E-34 1.2E-38 281.6 10.3 250 771-1043 94-349 (391)
324 cd07849 STKc_ERK1_2_like Catal 100.0 5.5E-33 1.2E-37 314.2 19.7 269 768-1043 4-292 (336)
325 cd07842 STKc_CDK8_like Catalyt 100.0 9.4E-33 2E-37 310.1 21.3 270 770-1043 1-313 (316)
326 KOG0444 Cytoskeletal regulator 100.0 1.5E-35 3.2E-40 321.2 -1.4 364 72-498 8-374 (1255)
327 KOG1024 Receptor-like protein 100.0 9.7E-34 2.1E-38 292.6 12.0 270 763-1055 278-563 (563)
328 cd07852 STKc_MAPK15 Catalytic 100.0 6.9E-33 1.5E-37 313.7 20.2 270 767-1043 5-295 (337)
329 cd08225 STKc_Nek5 Catalytic do 100.0 4.2E-33 9.1E-38 302.9 17.6 249 770-1043 1-254 (257)
330 cd06657 STKc_PAK4 Catalytic do 100.0 5.4E-33 1.2E-37 307.3 18.7 245 774-1043 25-270 (292)
331 cd07855 STKc_ERK5 Catalytic do 100.0 5.7E-33 1.2E-37 313.8 19.2 271 768-1044 4-295 (334)
332 cd07840 STKc_CDK9_like Catalyt 100.0 1.1E-32 2.4E-37 304.9 20.9 266 771-1043 1-284 (287)
333 cd05633 STKc_GRK3 Catalytic do 100.0 8.9E-33 1.9E-37 303.7 19.6 242 776-1043 1-255 (279)
334 KOG0604 MAP kinase-activated p 100.0 2.2E-33 4.7E-38 281.0 13.1 255 765-1043 57-322 (400)
335 cd07837 STKc_CdkB_plant Cataly 100.0 1.2E-32 2.6E-37 305.9 20.2 268 769-1043 1-291 (295)
336 cd05118 STKc_CMGC Catalytic do 100.0 1.9E-32 4.1E-37 302.3 21.7 267 771-1043 1-280 (283)
337 cd06616 PKc_MKK4 Catalytic dom 100.0 7.1E-33 1.5E-37 306.5 18.1 253 770-1043 5-267 (288)
338 cd08226 PK_STRAD_beta Pseudoki 100.0 2.4E-32 5.2E-37 307.8 22.6 276 775-1053 4-320 (328)
339 PLN00009 cyclin-dependent kina 100.0 1.5E-32 3.2E-37 304.9 20.5 269 769-1043 2-284 (294)
340 cd08215 STKc_Nek Catalytic dom 100.0 1.4E-32 2.9E-37 298.9 19.5 249 770-1043 1-255 (258)
341 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.1E-32 4.6E-37 298.5 21.0 251 769-1043 2-261 (264)
342 KOG0200 Fibroblast/platelet-de 100.0 7E-33 1.5E-37 331.8 18.7 256 770-1047 297-579 (609)
343 cd07865 STKc_CDK9 Catalytic do 100.0 1.4E-32 3.1E-37 307.7 19.9 271 768-1043 11-307 (310)
344 cd06618 PKc_MKK7 Catalytic dom 100.0 1.1E-32 2.4E-37 306.0 18.8 253 768-1044 14-274 (296)
345 cd06627 STKc_Cdc7_like Catalyt 100.0 1.8E-32 4E-37 297.2 20.1 248 770-1043 1-251 (254)
346 cd07850 STKc_JNK Catalytic dom 100.0 1.8E-32 3.9E-37 312.1 20.9 266 767-1043 14-311 (353)
347 cd08530 STKc_CNK2-like Catalyt 100.0 1.3E-32 2.8E-37 298.8 18.9 247 770-1043 1-253 (256)
348 cd05577 STKc_GRK Catalytic dom 100.0 1.3E-32 2.7E-37 302.6 18.8 244 777-1043 1-254 (277)
349 cd07864 STKc_CDK12 Catalytic d 100.0 2.4E-32 5.1E-37 304.7 21.3 271 766-1043 4-299 (302)
350 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.4E-32 3.1E-37 310.8 19.3 273 768-1048 4-298 (337)
351 KOG0690 Serine/threonine prote 100.0 2.5E-33 5.5E-38 282.6 11.6 250 767-1043 166-424 (516)
352 cd07879 STKc_p38delta_MAPK13 C 100.0 2.1E-32 4.5E-37 310.0 20.3 269 768-1049 14-305 (342)
353 cd05572 STKc_cGK_PKG Catalytic 100.0 2.8E-32 6.1E-37 297.3 20.6 243 777-1043 1-252 (262)
354 KOG0986 G protein-coupled rece 100.0 2.4E-33 5.2E-38 295.4 11.5 253 768-1043 184-446 (591)
355 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 2.8E-32 6E-37 306.7 20.4 269 764-1043 5-288 (328)
356 cd06633 STKc_TAO3 Catalytic do 100.0 4.6E-32 1E-36 303.2 21.9 244 771-1043 23-273 (313)
357 cd07880 STKc_p38gamma_MAPK12 C 100.0 4.1E-32 8.8E-37 307.6 21.7 269 764-1043 10-298 (343)
358 cd07838 STKc_CDK4_6_like Catal 100.0 7.5E-32 1.6E-36 298.3 23.3 265 771-1043 1-284 (287)
359 cd08216 PK_STRAD Pseudokinase 100.0 3.5E-32 7.5E-37 305.1 20.8 266 775-1044 8-296 (314)
360 PHA02882 putative serine/threo 100.0 3.3E-32 7.2E-37 301.5 20.3 259 768-1044 11-293 (294)
361 cd06634 STKc_TAO2 Catalytic do 100.0 2.4E-32 5.3E-37 304.9 19.4 247 770-1045 16-269 (308)
362 cd07877 STKc_p38alpha_MAPK14 C 100.0 4.2E-32 9.2E-37 307.7 21.0 273 760-1044 8-301 (345)
363 cd07834 STKc_MAPK Catalytic do 100.0 2.9E-32 6.2E-37 308.0 19.5 274 770-1049 1-297 (330)
364 cd05579 STKc_MAST_like Catalyt 100.0 1.5E-32 3.2E-37 300.0 16.5 244 777-1043 1-254 (265)
365 cd05611 STKc_Rim15_like Cataly 100.0 4.4E-32 9.5E-37 295.4 20.2 240 775-1041 2-246 (260)
366 PHA03210 serine/threonine kina 100.0 2.8E-32 6E-37 322.4 20.1 271 768-1043 147-454 (501)
367 KOG0586 Serine/threonine prote 100.0 1.7E-32 3.7E-37 302.5 15.6 250 767-1044 54-307 (596)
368 cd07851 STKc_p38 Catalytic dom 100.0 3E-32 6.5E-37 308.8 17.7 266 766-1043 12-298 (343)
369 cd05606 STKc_beta_ARK Catalyti 100.0 9.2E-32 2E-36 295.6 21.1 242 776-1043 1-255 (278)
370 cd05581 STKc_PDK1 Catalytic do 100.0 2.4E-32 5.3E-37 301.0 16.1 250 769-1043 1-277 (280)
371 KOG4250 TANK binding protein k 100.0 1.2E-32 2.5E-37 307.4 13.5 276 771-1052 15-315 (732)
372 cd07854 STKc_MAPK4_6 Catalytic 100.0 4.9E-32 1.1E-36 306.9 18.7 269 768-1043 4-300 (342)
373 cd07830 STKc_MAK_like Catalyti 100.0 1E-31 2.2E-36 296.5 20.6 266 771-1043 1-280 (283)
374 cd07866 STKc_BUR1 Catalytic do 100.0 8E-32 1.7E-36 301.8 19.8 271 768-1043 7-308 (311)
375 PTZ00024 cyclin-dependent prot 100.0 1E-31 2.2E-36 303.9 19.9 269 769-1043 8-313 (335)
376 cd05613 STKc_MSK1_N N-terminal 100.0 9.1E-32 2E-36 297.9 18.9 252 770-1043 1-268 (290)
377 cd05583 STKc_MSK_N N-terminal 100.0 6E-32 1.3E-36 299.1 17.2 255 770-1046 1-266 (288)
378 cd07829 STKc_CDK_like Catalyti 100.0 1.3E-31 2.9E-36 295.5 19.2 267 771-1043 1-279 (282)
379 KOG0662 Cyclin-dependent kinas 100.0 3.8E-32 8.2E-37 251.8 12.3 267 770-1043 3-283 (292)
380 cd08222 STKc_Nek11 Catalytic d 100.0 9.2E-32 2E-36 292.8 17.6 248 770-1043 1-257 (260)
381 cd07857 STKc_MPK1 Catalytic do 100.0 2.4E-31 5.3E-36 300.2 20.6 268 770-1043 1-292 (332)
382 KOG4236 Serine/threonine prote 100.0 1E-32 2.2E-37 294.1 8.6 246 774-1044 569-820 (888)
383 KOG0612 Rho-associated, coiled 100.0 1.5E-32 3.2E-37 318.9 9.9 258 764-1044 70-339 (1317)
384 KOG1151 Tousled-like protein k 100.0 2.1E-32 4.6E-37 285.9 8.0 256 769-1042 463-740 (775)
385 KOG0669 Cyclin T-dependent kin 100.0 5.9E-33 1.3E-37 270.9 3.5 272 769-1047 17-319 (376)
386 KOG0671 LAMMER dual specificit 100.0 4.4E-32 9.5E-37 281.9 9.9 266 768-1043 88-406 (415)
387 cd05610 STKc_MASTL Catalytic d 100.0 5.8E-31 1.3E-35 320.6 21.3 146 768-917 3-152 (669)
388 cd05123 STKc_AGC Catalytic dom 100.0 6.3E-31 1.4E-35 284.4 18.5 239 777-1042 1-246 (250)
389 KOG0603 Ribosomal protein S6 k 100.0 2.1E-31 4.6E-36 295.5 13.5 241 768-1044 321-564 (612)
390 cd05576 STKc_RPK118_like Catal 100.0 9.1E-31 2E-35 280.4 16.5 219 780-1037 4-223 (237)
391 KOG0587 Traf2- and Nck-interac 100.0 8.8E-31 1.9E-35 297.7 17.0 254 766-1043 16-282 (953)
392 KOG0696 Serine/threonine prote 100.0 2.1E-31 4.5E-36 276.6 9.4 263 745-1035 326-593 (683)
393 KOG1006 Mitogen-activated prot 100.0 4.7E-32 1E-36 267.0 2.9 248 774-1043 69-327 (361)
394 PLN03224 probable serine/threo 100.0 5.7E-30 1.2E-34 295.0 19.9 265 767-1043 143-500 (507)
395 PLN03225 Serine/threonine-prot 100.0 5E-30 1.1E-34 304.1 19.3 260 767-1043 130-450 (566)
396 KOG1027 Serine/threonine prote 100.0 4.5E-31 9.6E-36 298.7 8.0 245 771-1043 511-767 (903)
397 KOG0668 Casein kinase II, alph 100.0 7.7E-30 1.7E-34 245.8 11.1 265 767-1044 36-323 (338)
398 smart00220 S_TKc Serine/Threon 100.0 4.5E-29 9.7E-34 268.3 18.4 239 781-1043 1-241 (244)
399 KOG0695 Serine/threonine prote 100.0 1.4E-29 3E-34 256.3 12.0 247 768-1035 249-502 (593)
400 KOG0614 cGMP-dependent protein 100.0 1.9E-30 4E-35 276.5 5.7 249 770-1044 421-678 (732)
401 KOG0664 Nemo-like MAPK-related 100.0 9.3E-31 2E-35 258.0 1.8 266 772-1045 56-345 (449)
402 KOG1290 Serine/threonine prote 100.0 2.7E-28 5.8E-33 260.1 18.1 266 769-1043 78-550 (590)
403 KOG0608 Warts/lats-like serine 100.0 8.6E-29 1.9E-33 269.6 13.1 206 770-979 630-879 (1034)
404 KOG0984 Mitogen-activated prot 100.0 9.4E-29 2E-33 235.1 11.1 199 771-975 48-256 (282)
405 KOG0665 Jun-N-terminal kinase 99.9 2.6E-28 5.6E-33 247.9 9.3 261 768-1043 16-310 (369)
406 cd00180 PKc Catalytic domain o 99.9 1.7E-26 3.7E-31 242.3 21.5 211 777-1044 1-215 (215)
407 KOG0576 Mitogen-activated prot 99.9 1.3E-28 2.9E-33 271.2 4.7 254 768-1043 14-271 (829)
408 KOG1152 Signal transduction se 99.9 7.4E-28 1.6E-32 260.9 9.4 198 767-972 559-770 (772)
409 KOG1167 Serine/threonine prote 99.9 2.1E-27 4.5E-32 251.1 11.8 272 764-1044 31-382 (418)
410 KOG4237 Extracellular matrix p 99.9 6.4E-29 1.4E-33 258.2 -1.9 409 245-664 50-498 (498)
411 smart00221 STYKc Protein kinas 99.9 2E-25 4.3E-30 237.0 19.4 199 771-973 1-202 (225)
412 KOG4237 Extracellular matrix p 99.9 4.1E-28 8.9E-33 252.2 -2.1 417 76-520 51-498 (498)
413 KOG0670 U4/U6-associated splic 99.9 2.4E-26 5.2E-31 245.9 9.3 198 767-973 430-637 (752)
414 KOG1345 Serine/threonine kinas 99.9 3E-26 6.4E-31 226.8 9.1 250 769-1042 24-283 (378)
415 smart00750 KIND kinase non-cat 99.9 6.8E-24 1.5E-28 215.9 14.2 170 850-1050 1-172 (176)
416 PLN00181 protein SPA1-RELATED; 99.9 2.3E-24 4.9E-29 270.1 10.3 198 821-1044 28-266 (793)
417 PLN03210 Resistant to P. syrin 99.9 1E-22 2.2E-27 262.6 21.1 125 510-640 778-903 (1153)
418 PRK09188 serine/threonine prot 99.9 1.5E-22 3.3E-27 223.8 15.7 166 766-946 15-195 (365)
419 PLN03210 Resistant to P. syrin 99.9 8.3E-22 1.8E-26 254.1 23.5 293 240-592 610-903 (1153)
420 KOG0195 Integrin-linked kinase 99.9 1.2E-23 2.6E-28 207.9 3.8 248 773-1048 194-447 (448)
421 KOG1163 Casein kinase (serine/ 99.9 4E-22 8.6E-27 194.4 14.1 264 767-1049 13-286 (341)
422 KOG1164 Casein kinase (serine/ 99.9 1.6E-21 3.5E-26 217.6 19.8 261 770-1050 19-300 (322)
423 PRK15387 E3 ubiquitin-protein 99.9 3.9E-22 8.5E-27 237.5 15.4 256 75-401 205-460 (788)
424 PRK15387 E3 ubiquitin-protein 99.9 2.6E-22 5.6E-27 239.0 13.4 261 315-672 203-463 (788)
425 KOG1165 Casein kinase (serine/ 99.9 5.4E-21 1.2E-25 195.1 19.1 262 769-1049 28-301 (449)
426 PRK15370 E3 ubiquitin-protein 99.9 9.4E-21 2E-25 227.7 18.3 246 120-399 179-428 (754)
427 KOG0590 Checkpoint kinase and 99.8 8.5E-22 1.8E-26 232.6 9.0 253 773-1042 322-584 (601)
428 COG0515 SPS1 Serine/threonine 99.8 1.3E-19 2.8E-24 205.3 21.1 258 771-1043 2-275 (384)
429 PRK15370 E3 ubiquitin-protein 99.8 8.7E-21 1.9E-25 228.0 9.9 283 143-514 178-461 (754)
430 PRK10359 lipopolysaccharide co 99.8 2.1E-20 4.5E-25 191.6 9.0 171 767-965 29-216 (232)
431 cd05147 RIO1_euk RIO kinase fa 99.8 7.7E-20 1.7E-24 186.4 11.7 139 774-919 2-167 (190)
432 KOG1240 Protein kinase contain 99.8 1.6E-20 3.5E-25 218.5 5.7 248 770-1046 24-294 (1431)
433 cd05145 RIO1_like RIO kinase f 99.8 8.7E-19 1.9E-23 179.7 15.2 138 774-919 2-167 (190)
434 PRK12274 serine/threonine prot 99.8 1E-18 2.2E-23 174.7 15.1 186 772-973 5-209 (218)
435 PF14531 Kinase-like: Kinase-l 99.8 6.4E-19 1.4E-23 186.1 13.3 229 772-1034 15-288 (288)
436 KOG1023 Natriuretic peptide re 99.8 9.3E-19 2E-23 196.4 12.6 218 819-1049 1-226 (484)
437 KOG4158 BRPK/PTEN-induced prot 99.8 9.9E-19 2.2E-23 182.5 9.8 197 823-1044 274-511 (598)
438 KOG0617 Ras suppressor protein 99.8 2E-20 4.3E-25 173.1 -3.0 182 458-668 29-213 (264)
439 KOG1166 Mitotic checkpoint ser 99.8 5.7E-18 1.2E-22 202.9 15.4 196 767-969 696-901 (974)
440 cd00116 LRR_RI Leucine-rich re 99.8 4.1E-20 8.9E-25 207.7 -2.7 181 100-302 3-206 (319)
441 cd00116 LRR_RI Leucine-rich re 99.7 4.1E-20 8.9E-25 207.7 -3.8 206 76-303 3-235 (319)
442 PRK10345 hypothetical protein; 99.7 2E-17 4.3E-22 169.8 14.1 137 771-916 4-156 (210)
443 KOG0617 Ras suppressor protein 99.7 1.2E-19 2.5E-24 168.1 -2.9 164 91-286 29-193 (264)
444 KOG0603 Ribosomal protein S6 k 99.7 6.9E-19 1.5E-23 196.4 1.4 225 776-1037 1-232 (612)
445 smart00090 RIO RIO-like kinase 99.7 8.5E-17 1.9E-21 169.7 13.3 142 769-919 28-198 (237)
446 PRK14879 serine/threonine prot 99.7 2.1E-16 4.7E-21 165.8 13.3 134 775-918 2-143 (211)
447 cd05144 RIO2_C RIO kinase fami 99.7 3.1E-16 6.7E-21 162.3 13.9 140 766-919 12-175 (198)
448 PRK09605 bifunctional UGMP fam 99.7 5.2E-16 1.1E-20 185.3 16.1 138 767-918 331-476 (535)
449 KOG1033 eIF-2alpha kinase PEK/ 99.7 3.6E-17 7.7E-22 179.4 4.3 243 771-1042 246-511 (516)
450 TIGR03724 arch_bud32 Kae1-asso 99.7 5.2E-16 1.1E-20 161.2 12.4 130 776-918 1-138 (199)
451 PLN03150 hypothetical protein; 99.6 1.1E-15 2.3E-20 184.2 12.3 150 23-179 368-526 (623)
452 cd05120 APH_ChoK_like Aminogly 99.6 1.2E-14 2.6E-19 143.8 12.7 135 773-918 2-138 (155)
453 KOG0606 Microtubule-associated 99.6 1.6E-15 3.5E-20 177.6 6.8 212 767-1037 81-306 (1205)
454 cd05119 RIO RIO kinase family, 99.6 1.3E-14 2.8E-19 149.0 12.1 135 774-919 2-164 (187)
455 KOG0590 Checkpoint kinase and 99.5 5.6E-16 1.2E-20 183.4 -1.3 256 769-1042 20-285 (601)
456 PRK01723 3-deoxy-D-manno-octul 99.5 7.8E-14 1.7E-18 147.6 14.0 135 774-918 36-191 (239)
457 PLN03150 hypothetical protein; 99.5 8.5E-15 1.8E-19 176.4 6.2 119 583-703 419-539 (623)
458 TIGR01982 UbiB 2-polyprenylphe 99.5 1.3E-12 2.9E-17 150.4 18.6 140 774-919 122-307 (437)
459 KOG0532 Leucine-rich repeat (L 99.4 1.9E-14 4.1E-19 157.7 -2.0 165 453-650 89-253 (722)
460 KOG1266 Protein kinase [Signal 99.4 5E-13 1.1E-17 137.2 6.5 204 819-1046 121-334 (458)
461 KOG0532 Leucine-rich repeat (L 99.4 3.3E-14 7.1E-19 155.8 -2.6 175 462-669 75-249 (722)
462 PRK04750 ubiB putative ubiquin 99.3 7.4E-11 1.6E-15 137.1 20.3 144 769-919 120-314 (537)
463 COG4886 Leucine-rich repeat (L 99.3 2.6E-12 5.5E-17 148.7 7.7 195 99-328 97-292 (394)
464 COG4886 Leucine-rich repeat (L 99.3 3.7E-12 7.9E-17 147.4 7.0 198 466-672 97-295 (394)
465 KOG0601 Cyclin-dependent kinas 99.3 3.6E-12 7.8E-17 143.5 6.6 249 770-1043 115-379 (524)
466 cd05151 ChoK Choline Kinase (C 99.3 1.7E-11 3.7E-16 123.7 9.5 128 774-918 3-136 (170)
467 KOG1909 Ran GTPase-activating 99.2 4.5E-13 9.7E-18 139.4 -3.0 114 237-350 181-310 (382)
468 KOG1243 Protein kinase [Genera 99.2 1.6E-10 3.4E-15 131.2 15.4 167 790-968 34-200 (690)
469 cd05146 RIO3_euk RIO kinase fa 99.2 2.6E-10 5.6E-15 114.8 14.4 136 774-919 2-174 (197)
470 KOG0601 Cyclin-dependent kinas 99.1 2.8E-11 6E-16 136.5 4.5 250 767-1049 263-520 (524)
471 KOG1909 Ran GTPase-activating 99.1 1.3E-12 2.7E-17 136.1 -5.7 256 89-399 24-311 (382)
472 KOG0531 Protein phosphatase 1, 99.1 1.1E-11 2.3E-16 143.5 0.4 201 458-670 114-321 (414)
473 KOG3207 Beta-tubulin folding c 99.1 1.1E-11 2.3E-16 132.6 0.2 211 141-377 119-341 (505)
474 KOG3207 Beta-tubulin folding c 99.1 9E-12 2E-16 133.2 -1.1 185 116-302 118-314 (505)
475 cd05154 ACAD10_11_like Acyl-Co 99.1 7.6E-10 1.7E-14 117.1 13.0 142 775-918 4-206 (223)
476 KOG1259 Nischarin, modulator o 99.1 4.2E-11 9.1E-16 121.4 2.6 134 287-429 282-415 (490)
477 COG3642 Mn2+-dependent serine/ 99.1 1.5E-09 3.3E-14 104.6 12.0 131 775-918 2-140 (204)
478 KOG0531 Protein phosphatase 1, 99.1 3.7E-11 8E-16 139.0 1.0 244 340-649 74-324 (414)
479 COG4248 Uncharacterized protei 99.0 7.9E-09 1.7E-13 110.4 17.3 266 773-1053 15-306 (637)
480 KOG1259 Nischarin, modulator o 99.0 7.9E-11 1.7E-15 119.4 2.0 138 528-671 278-416 (490)
481 PF14580 LRR_9: Leucine-rich r 99.0 2.3E-10 5E-15 112.9 5.0 128 116-273 16-148 (175)
482 KOG3087 Serine/threonine prote 99.0 4.8E-09 1E-13 100.3 12.2 142 773-918 11-165 (229)
483 KOG4658 Apoptotic ATPase [Sign 99.0 5.1E-10 1.1E-14 137.7 6.7 270 96-395 546-828 (889)
484 PF14580 LRR_9: Leucine-rich r 98.9 2.2E-10 4.8E-15 113.0 1.9 110 261-375 15-126 (175)
485 KOG4658 Apoptotic ATPase [Sign 98.9 2.2E-09 4.8E-14 132.2 9.3 276 193-477 524-809 (889)
486 KOG0606 Microtubule-associated 98.9 3.6E-10 7.7E-15 133.6 0.6 250 767-1038 802-1084(1205)
487 PF01163 RIO1: RIO1 family; I 98.9 1.9E-08 4E-13 101.2 12.1 125 784-919 1-156 (188)
488 PRK15123 lipopolysaccharide co 98.8 4.7E-08 1E-12 104.5 14.2 140 775-918 28-194 (268)
489 PF08263 LRRNT_2: Leucine rich 98.8 3.4E-09 7.5E-14 78.4 3.4 41 26-67 2-43 (43)
490 PF13855 LRR_8: Leucine rich r 98.8 5E-09 1.1E-13 84.9 3.3 60 583-642 2-61 (61)
491 KOG3741 Poly(A) ribonuclease s 98.7 4.2E-07 9.1E-12 100.3 18.7 166 782-969 289-474 (655)
492 COG0478 RIO-like serine/threon 98.7 8.2E-08 1.8E-12 98.4 11.6 134 772-918 94-251 (304)
493 PF13855 LRR_8: Leucine rich r 98.7 9.6E-09 2.1E-13 83.3 3.1 59 463-521 2-60 (61)
494 COG0661 AarF Predicted unusual 98.6 1.6E-07 3.4E-12 108.7 12.2 140 775-920 131-316 (517)
495 PRK09902 hypothetical protein; 98.6 4.7E-07 1E-11 91.3 12.2 137 777-918 26-179 (216)
496 KOG1859 Leucine-rich repeat pr 98.6 2.1E-09 4.6E-14 121.5 -5.7 128 535-668 165-293 (1096)
497 KOG4579 Leucine-rich repeat (L 98.5 8.5E-09 1.8E-13 93.2 -1.2 115 556-673 51-165 (177)
498 KOG2120 SCF ubiquitin ligase, 98.5 3.3E-09 7.1E-14 108.1 -5.6 179 96-298 186-372 (419)
499 KOG1859 Leucine-rich repeat pr 98.5 4.9E-09 1.1E-13 118.6 -5.1 127 266-399 165-292 (1096)
500 COG5238 RNA1 Ran GTPase-activa 98.5 8.6E-09 1.9E-13 103.7 -3.3 256 91-376 26-317 (388)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.2e-115 Score=1122.89 Aligned_cols=917 Identities=33% Similarity=0.552 Sum_probs=691.2
Q ss_pred CcchHHHHHHHHHhcccCCCCcccCCCCCCCCCCcccceeEecCCCCceeEEeeecccCcccccccccCCCCCcEEeCCC
Q 001544 25 IDIDQDALLALKDHITYDPTNFFAKNWLTNSTMVCNWTGVTCDINQRRVTALNISYLSLTGNIPRQLGNLSSLEILDLNF 104 (1057)
Q Consensus 25 ~~~d~~~l~~~k~~~~~~~~~~~~~~w~~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~ 104 (1057)
.+.|++||++||+++. ||.+.+ .+|.. +.+||.|.||+|+. ..+|+.|+|++++++|.+|+.+..+++|++|+|++
T Consensus 27 ~~~~~~~l~~~~~~~~-~~~~~~-~~w~~-~~~~c~w~gv~c~~-~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~ 102 (968)
T PLN00113 27 HAEELELLLSFKSSIN-DPLKYL-SNWNS-SADVCLWQGITCNN-SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSN 102 (968)
T ss_pred CHHHHHHHHHHHHhCC-CCcccC-CCCCC-CCCCCcCcceecCC-CCcEEEEEecCCCccccCChHHhCCCCCCEEECCC
Confidence 3578999999999995 777666 58954 57899999999985 46899999999999999999999999999999999
Q ss_pred CCccccCCcccc-cccccceeecccccccCCCCccccccCCCCeEeccCCCCCCCCCcccccCCCCCceeEccCCccccc
Q 001544 105 NRLSGEIPWELG-NLAKLEKLLLHNNFLTGTIPFSIFKLSSLLDLKLSDNNLTGTIPSHNLGNLSSLQLLDLSDNQLSGS 183 (1057)
Q Consensus 105 n~l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~l~~L~~L~Ls~n~l~~~ 183 (1057)
|+++|.+|..+. .+++|++|+|++|++++.+|. +.+++|++|+|++|.+++.+|. .++++++|++|+|++|.+.+.
T Consensus 103 n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~-~~~~l~~L~~L~L~~n~l~~~ 179 (968)
T PLN00113 103 NQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPN-DIGSFSSLKVLDLGGNVLVGK 179 (968)
T ss_pred CccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCCh-HHhcCCCCCEEECccCccccc
Confidence 999999998765 899999999999999988886 5688999999999999888886 488999999999999999888
Q ss_pred CchhhhccccCCeeEeeccCCccccCccccCCCCcccEEEeeccccccCccccccCCCCCcEEEccCCCCcCCccccccC
Q 001544 184 IPSFIFKISSLQALHFGNNRLSGELPANICDNLPFLNFFSVYKNMFYGGISSTLSNCKHLRILDLSFNDLWGDIPKEIGN 263 (1057)
Q Consensus 184 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~ 263 (1057)
+|..++++++|++|+|++|++++.+|. .++++++|++|+|++|.+++.+|..+++
T Consensus 180 ~p~~~~~l~~L~~L~L~~n~l~~~~p~-------------------------~l~~l~~L~~L~L~~n~l~~~~p~~l~~ 234 (968)
T PLN00113 180 IPNSLTNLTSLEFLTLASNQLVGQIPR-------------------------ELGQMKSLKWIYLGYNNLSGEIPYEIGG 234 (968)
T ss_pred CChhhhhCcCCCeeeccCCCCcCcCCh-------------------------HHcCcCCccEEECcCCccCCcCChhHhc
Confidence 999999999999999999988776664 3466778888888888887778888888
Q ss_pred cCCCcEEeeeccccccccCccccccccccEEEeecCccccccCccccccccccEEEecCCccccCCCCCcccCCCCCceE
Q 001544 264 LTKLKELFLDFNILQGEIPHTVGNLHNLEYLSLVNNELVGTVPATIFNVSTLKLIELSNNTFFGSLPSSTDVQLPNLEEL 343 (1057)
Q Consensus 264 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L 343 (1057)
+++|++|++++|.+++.+|..|+++++|++|+|++|++.+.+|..+.++++|+.|++++|.+.+.+|..+ ..+++|+.|
T Consensus 235 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~-~~l~~L~~L 313 (968)
T PLN00113 235 LTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELV-IQLQNLEIL 313 (968)
T ss_pred CCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhH-cCCCCCcEE
Confidence 8888888888888887778888888888888888888877777777777777777777777766655443 356667777
Q ss_pred EecCccccccCCccccccccccccccccccccccccchhcccccccEEeccCcccCCCccccccccCCCcchhhhhccCC
Q 001544 344 YLWGNNFSGTLPSFIFNASNLSKLSLGDNSFSGLIPNTFGNLRNLKRLRLYNNYLTSPELSFLSSLSNCKYLEIIALSGN 423 (1057)
Q Consensus 344 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~l~~L~~L~Ls~N 423 (1057)
++++|.+++..|..+..+++|+.|++++|.+++.+|..++.+++|+.|++++|.++
T Consensus 314 ~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~------------------------ 369 (968)
T PLN00113 314 HLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLT------------------------ 369 (968)
T ss_pred ECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeE------------------------
Confidence 77777776666666666666777777766666666666665555555555555443
Q ss_pred CcccccccccccccccccEEEcCCCcccccccccccCccCCcEEEccCCcCCCCCCcccccccccceeecccccCcccCC
Q 001544 424 PLNGIIPMSAGNLSHSLEELFMPDCNVSGRIPKEIGNLANLVTLDLGGNKFNGSIPIALGKLQKLQLLNLDDNKLEGSIP 503 (1057)
Q Consensus 424 ~l~~~~~~~~~~l~~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 503 (1057)
+.+|..+..+++|+.|++++|++.+.+|..+..+++|+.|++++|++++..|
T Consensus 370 ----------------------------~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p 421 (968)
T PLN00113 370 ----------------------------GEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELP 421 (968)
T ss_pred ----------------------------eeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECC
Confidence 2334444445555555555555555555555555555555555555555555
Q ss_pred cccccccccceEEecCeeeeecCCccccCcccccccccCCccccccccccccccccccEEEeccccccCCCchhhccccc
Q 001544 504 DDICGLVELYKLALGDNKLSGQIPACFGNLASLRELWLGPNELISFIPSTFWNIKDIMYVNFSSNFLTGPLPLEIENLKA 583 (1057)
Q Consensus 504 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 583 (1057)
..|..++.|+.|++++|++++.+|..+..+++|+.|++++|++.+..|..+ ..++|+.|++++|++++..|..+..+++
T Consensus 422 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~ 500 (968)
T PLN00113 422 SEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSE 500 (968)
T ss_pred hhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhc
Confidence 555555555555555555555555555555666666666666555555443 3467888999999999999999999999
Q ss_pred cceeccccccccccccccccCccccceecccccccccccCccccccCccceecccCccccCCCcccccCcccccccccCC
Q 001544 584 LTTLDFSMNNLSGVIPTTIGGLKGLQYLFLGHNRLQGSIPDSVGDLISLKSLNLSNNNLSGPIPTSLEKLSDLKELNLSF 663 (1057)
Q Consensus 584 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~ 663 (1057)
|+.|+|++|++++.+|..++.+++|+.|+|++|+++|.+|..|..+++|+.|||++|+++|.+|..+..+++|+.|++++
T Consensus 501 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~ 580 (968)
T PLN00113 501 LMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISH 580 (968)
T ss_pred cCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCcCCCCCCCcccCcccccCCcccCCCCC-CCCCCCccccccccccchhhhhhccchhhhHhHHHHHhhhhhcccCC
Q 001544 664 NKLEGEIPRGGPFVNFSAKSFMGNNLLCGSPN-LQVPPCRASIDHISKKNALLLGIILPFSTIFVIVIILLISRYQTRGE 742 (1057)
Q Consensus 664 N~l~~~~p~~~~~~~~~~~~~~~n~~~cg~~~-~~~~~c~~~~~~~~~~~~~~~~i~~~~~~i~l~v~~~~~~~~~~~~~ 742 (1057)
|+++|.+|..++|.++...++.||+.+||.+. ...++|..... ......++.++++++.++++++++++++|++++.+
T Consensus 581 N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (968)
T PLN00113 581 NHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRK-TPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLE 659 (968)
T ss_pred CcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccccc-cceeeeehhHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 99999999999999999999999999999653 23557754321 11111111111111111112222222222222111
Q ss_pred --CCCCC---CCCccc--cccccCCHHHHHHHhCCCCCCceeccccCeEEEEEEe-cCCcEEEEEEeeccchhHHHHHHH
Q 001544 743 --NVPNE---VNVPLE--ATWRRFSYLELFQATNGFSENNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQHERAFKSFDT 814 (1057)
Q Consensus 743 --~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~ 814 (1057)
+...+ .+.... ...+.++++++ ...|+..++||+|+||.||+|.. .++..||||+++..... ..+
T Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~ 732 (968)
T PLN00113 660 LKRVENEDGTWELQFFDSKVSKSITINDI---LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSS 732 (968)
T ss_pred ccccccccccccccccccccchhhhHHHH---HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHH
Confidence 11110 000000 00122333333 34677889999999999999986 57899999998643321 234
Q ss_pred HHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcc
Q 001544 815 ECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCD 894 (1057)
Q Consensus 815 E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 894 (1057)
|++.+++++||||++++++|.+++..++||||+++|+|.++++. ++|.++.+|+.|+|+|++|||..++++|+|||
T Consensus 733 ~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~d 808 (968)
T PLN00113 733 EIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGN 808 (968)
T ss_pred HHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCC
Confidence 68899999999999999999999999999999999999999963 88999999999999999999977778999999
Q ss_pred CCCCCeeeCCCCcEEEEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcc
Q 001544 895 LKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEI 974 (1057)
Q Consensus 895 lkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~ 974 (1057)
|||+||+++.++.+++. ||.+.... ......++++|+|||+..+..++.++|||||||++|||+||+.||+..
T Consensus 809 lkp~Nil~~~~~~~~~~-~~~~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~ 881 (968)
T PLN00113 809 LSPEKIIIDGKDEPHLR-LSLPGLLC------TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAE 881 (968)
T ss_pred CCHHhEEECCCCceEEE-eccccccc------cCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcc
Confidence 99999999999988876 66554321 112236789999999999999999999999999999999999999765
Q ss_pred cccccchhhhhhhccchh-HHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHHH
Q 001544 975 FSGEMTLKHWVNDFLPIS-MMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRDF 1050 (1057)
Q Consensus 975 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 1050 (1057)
.........|........ ....+|+..... .........++.+++.+||+.||++||+|+|++++|+++.+.
T Consensus 882 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 882 FGVHGSIVEWARYCYSDCHLDMWIDPSIRGD----VSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred cCCCCcHHHHHHHhcCccchhheeCccccCC----CCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 554555566654433221 222333322111 111223456788999999999999999999999999998764
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.2e-61 Score=621.91 Aligned_cols=518 Identities=39% Similarity=0.594 Sum_probs=451.7
Q ss_pred CCCcEEeCCCCCccccCCcccccccccceeecccccccCCCCcccc-ccCCCCeEeccCCCCCCCCCcccccCCCCCcee
Q 001544 95 SSLEILDLNFNRLSGEIPWELGNLAKLEKLLLHNNFLTGTIPFSIF-KLSSLLDLKLSDNNLTGTIPSHNLGNLSSLQLL 173 (1057)
Q Consensus 95 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~n~l~~~~p~~~l~~l~~L~~L 173 (1057)
.+++.|||++|+++|.+|..+..+++|++|+|++|+++|.+|..+. .+++|++|+|++|+++|.+|. +.+++|++|
T Consensus 69 ~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~---~~l~~L~~L 145 (968)
T PLN00113 69 SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR---GSIPNLETL 145 (968)
T ss_pred CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc---cccCCCCEE
Confidence 4689999999999999999999999999999999999999998876 999999999999999998885 568999999
Q ss_pred EccCCcccccCchhhhccccCCeeEeeccCCccccCccccCCCCcccEEEeeccccccCccccccCCCCCcEEEccCCCC
Q 001544 174 DLSDNQLSGSIPSFIFKISSLQALHFGNNRLSGELPANICDNLPFLNFFSVYKNMFYGGISSTLSNCKHLRILDLSFNDL 253 (1057)
Q Consensus 174 ~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l 253 (1057)
+|++|.+++.+|..++.+++|++|+|++|.+++.+|. .++++++|++|+|++|.+
T Consensus 146 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~-------------------------~~~~l~~L~~L~L~~n~l 200 (968)
T PLN00113 146 DLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPN-------------------------SLTNLTSLEFLTLASNQL 200 (968)
T ss_pred ECcCCcccccCChHHhcCCCCCEEECccCcccccCCh-------------------------hhhhCcCCCeeeccCCCC
Confidence 9999999999999999999999999999988766554 457788999999999999
Q ss_pred cCCccccccCcCCCcEEeeeccccccccCccccccccccEEEeecCccccccCccccccccccEEEecCCccccCCCCCc
Q 001544 254 WGDIPKEIGNLTKLKELFLDFNILQGEIPHTVGNLHNLEYLSLVNNELVGTVPATIFNVSTLKLIELSNNTFFGSLPSST 333 (1057)
Q Consensus 254 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 333 (1057)
++.+|..++++++|++|+|++|.+++.+|..++++++|++|++++|++++.+|..+.++++|+.|+|++|.+.+.+|..+
T Consensus 201 ~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l 280 (968)
T PLN00113 201 VGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSI 280 (968)
T ss_pred cCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhH
Confidence 98899999999999999999999998999999999999999999999988888888888888888888887776666554
Q ss_pred ccCCCCCceEEecCccccccCCccccccccccccccccccccccccchhcccccccEEeccCcccCCCccccccccCCCc
Q 001544 334 DVQLPNLEELYLWGNNFSGTLPSFIFNASNLSKLSLGDNSFSGLIPNTFGNLRNLKRLRLYNNYLTSPELSFLSSLSNCK 413 (1057)
Q Consensus 334 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~l~ 413 (1057)
. .+++|++|+|++|++.+.+|..+..+++|+.|++++|.+.+..|..+..+++|+.|++++|.
T Consensus 281 ~-~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~---------------- 343 (968)
T PLN00113 281 F-SLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNK---------------- 343 (968)
T ss_pred h-hccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCC----------------
Confidence 3 56677777777777776666666666667777777666666666666655555555555444
Q ss_pred chhhhhccCCCcccccccccccccccccEEEcCCCcccccccccccCccCCcEEEccCCcCCCCCCcccccccccceeec
Q 001544 414 YLEIIALSGNPLNGIIPMSAGNLSHSLEELFMPDCNVSGRIPKEIGNLANLVTLDLGGNKFNGSIPIALGKLQKLQLLNL 493 (1057)
Q Consensus 414 ~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L 493 (1057)
+.+.+|..++.+++|+.|+|++|++++.+|.++..+++|+.|++
T Consensus 344 ------------------------------------l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l 387 (968)
T PLN00113 344 ------------------------------------FSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLIL 387 (968)
T ss_pred ------------------------------------CcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEEC
Confidence 33456777888899999999999999999999999999999999
Q ss_pred ccccCcccCCcccccccccceEEecCeeeeecCCccccCcccccccccCCccccccccccccccccccEEEeccccccCC
Q 001544 494 DDNKLEGSIPDDICGLVELYKLALGDNKLSGQIPACFGNLASLRELWLGPNELISFIPSTFWNIKDIMYVNFSSNFLTGP 573 (1057)
Q Consensus 494 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 573 (1057)
++|++.+.+|..+..+++|+.|++++|++++..|..|..+++|+.|++++|.+.+..+..++.+++|+.|++++|.+.+.
T Consensus 388 ~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~ 467 (968)
T PLN00113 388 FSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGG 467 (968)
T ss_pred cCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CchhhccccccceeccccccccccccccccCccccceecccccccccccCccccccCccceecccCccccCCCcccccCc
Q 001544 574 LPLEIENLKALTTLDFSMNNLSGVIPTTIGGLKGLQYLFLGHNRLQGSIPDSVGDLISLKSLNLSNNNLSGPIPTSLEKL 653 (1057)
Q Consensus 574 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 653 (1057)
.|..+ ..++|+.|+|++|++++.+|..|..+++|+.|+|++|++++.+|..+.++++|++|+|++|+++|.+|..+..+
T Consensus 468 ~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 546 (968)
T PLN00113 468 LPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEM 546 (968)
T ss_pred cCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCc
Confidence 88766 45899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCcccCcCCCC-CCCcccCcccccCCcccCCCC
Q 001544 654 SDLKELNLSFNKLEGEIPRG-GPFVNFSAKSFMGNNLLCGSP 694 (1057)
Q Consensus 654 ~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~~cg~~ 694 (1057)
++|+.|+|++|+++|.+|.. ..+..+......+|+..+.-|
T Consensus 547 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 588 (968)
T PLN00113 547 PVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588 (968)
T ss_pred ccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCC
Confidence 99999999999999999973 234444555566776554333
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-49 Score=440.62 Aligned_cols=289 Identities=41% Similarity=0.661 Sum_probs=244.9
Q ss_pred ccccCCHHHHHHHhCCCCCCceeccccCeEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeee
Q 001544 755 TWRRFSYLELFQATNGFSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSC 834 (1057)
Q Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 834 (1057)
..+.|++.++..+|++|...++||+|+||.||+|..++|+.||||++.........+|.+|++++++++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 56789999999999999999999999999999999999999999988654432145699999999999999999999999
Q ss_pred ccCC-eeEEEEEEccCCChhHHHhcCCc-cCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEc
Q 001544 835 SNED-FKALILEYMRNGSLEKCLYSGNY-ILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSD 912 (1057)
Q Consensus 835 ~~~~-~~~lV~E~~~~gsL~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 912 (1057)
.+.+ +.++|||||++|+|+++++.... +++|.+|++||.++|+||+|||+.+.++||||||||+|||+|+++++||+|
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD 220 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD 220 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence 9988 59999999999999999998776 899999999999999999999998888999999999999999999999999
Q ss_pred ccccccccCCCCccccccc-cccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCccc-ccccchhhhhhhccc
Q 001544 913 FGIAKLLIGEDQSMTQTQT-LATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIF-SGEMTLKHWVNDFLP 990 (1057)
Q Consensus 913 fg~a~~~~~~~~~~~~~~~-~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~-~~~~~~~~~~~~~~~ 990 (1057)
||+|+..... ....... .||.+|+|||+...+..+.|+|||||||+++|++||+.|.+... .++..+..|......
T Consensus 221 FGLa~~~~~~--~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~ 298 (361)
T KOG1187|consen 221 FGLAKLGPEG--DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLE 298 (361)
T ss_pred ccCcccCCcc--ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHH
Confidence 9999654221 1111122 79999999999999999999999999999999999999887644 344557888755543
Q ss_pred h-hHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHH
Q 001544 991 I-SMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRD 1049 (1057)
Q Consensus 991 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~ 1049 (1057)
. ...+++|+.+.... ... ......+..++.+|++.+|++||+|.||++.|+.+..
T Consensus 299 ~~~~~eiiD~~l~~~~---~~~-~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 299 EGKLREIVDPRLKEGE---YPD-EKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred CcchhheeCCCccCCC---CCh-HHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 3 57777777654211 110 1345668999999999999999999999999976654
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-45 Score=381.93 Aligned_cols=253 Identities=24% Similarity=0.326 Sum_probs=210.1
Q ss_pred CCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCC-eeEEEEEEc
Q 001544 771 FSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNED-FKALILEYM 847 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lV~E~~ 847 (1057)
.+..+.||+|..|+|||++.+ +++-+|+|++.... +...+++.+|++++++.+||+||+++|+|.... ..+++||||
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYM 160 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYM 160 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhc
Confidence 445688999999999999865 78999999995543 455688999999999999999999999999888 599999999
Q ss_pred cCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccc
Q 001544 848 RNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT 927 (1057)
Q Consensus 848 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 927 (1057)
++|+|++++...+ .+++....+|+.+|++||.|||+ +++||||||||+|||++..|++||||||.++.+.. ..
T Consensus 161 DgGSLd~~~k~~g-~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvn----S~ 233 (364)
T KOG0581|consen 161 DGGSLDDILKRVG-RIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVN----SI 233 (364)
T ss_pred CCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhh----hh
Confidence 9999999887653 59999999999999999999994 49999999999999999999999999999987632 24
Q ss_pred cccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccch
Q 001544 928 QTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDK 1007 (1057)
Q Consensus 928 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1057)
....+||..|||||-+.+..|+.++||||||++++|+++|+.||....+. ...| .+.++..... +.+
T Consensus 234 a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~---~~~~---------~~Ll~~Iv~~-ppP 300 (364)
T KOG0581|consen 234 ANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPP---YLDI---------FELLCAIVDE-PPP 300 (364)
T ss_pred cccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCC---CCCH---------HHHHHHHhcC-CCC
Confidence 55678999999999999999999999999999999999999998764111 1111 1222221111 111
Q ss_pred hhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 1008 HFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
..+. ..+++++.+++..|+++||.+||++.|+++|=
T Consensus 301 ~lP~-~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hp 336 (364)
T KOG0581|consen 301 RLPE-GEFSPEFRSFVSCCLRKDPSERPSAKQLLQHP 336 (364)
T ss_pred CCCc-ccCCHHHHHHHHHHhcCCcccCCCHHHHhcCH
Confidence 1111 14889999999999999999999999999874
No 5
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-45 Score=400.13 Aligned_cols=257 Identities=30% Similarity=0.477 Sum_probs=213.9
Q ss_pred CCCceeccccCeEEEEEEecCCcEEEEEEeeccch--hHHHHHHHHHHHHHhcCCCCceeEeeeeccCC-eeEEEEEEcc
Q 001544 772 SENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHE--RAFKSFDTECEVMKSIRHRNLTKIISSCSNED-FKALILEYMR 848 (1057)
Q Consensus 772 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lV~E~~~ 848 (1057)
...+.+|+|+||+||+|.+.....||||++..... ...++|.+|+.+|++++|||||+++|+|.+.. ..++|||||+
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~ 123 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP 123 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence 34456999999999999998444499999965432 22579999999999999999999999999887 7899999999
Q ss_pred CCChhHHHhc-CCccCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEEccCCCCCeeeCCCC-cEEEEcccccccccCCCCc
Q 001544 849 NGSLEKCLYS-GNYILDIFQRLNIMIDVASALEYLHFGYSAP-VIHCDLKPSNVLLDDNM-VAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 849 ~gsL~~~l~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-ivH~Dlkp~Nill~~~~-~~kl~Dfg~a~~~~~~~~~ 925 (1057)
+|+|.++++. ....+++..+++|+.|||+|+.||| +.+ ||||||||+|||++.++ ++||+|||+++......
T Consensus 124 ~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~-- 198 (362)
T KOG0192|consen 124 GGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK-- 198 (362)
T ss_pred CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc--
Confidence 9999999988 3677999999999999999999999 777 99999999999999998 99999999998753211
Q ss_pred cccccccccccccCccccC--CCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccccc
Q 001544 926 MTQTQTLATLGYMAPEYGR--EGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLI 1003 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~--~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1057)
...+...||+.|||||++. ...++.|+||||||+++|||+||+.||........ . ..+.
T Consensus 199 ~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~--~-----------~~v~------ 259 (362)
T KOG0192|consen 199 TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQV--A-----------SAVV------ 259 (362)
T ss_pred ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHH--H-----------HHHH------
Confidence 3444478999999999999 56899999999999999999999999987433111 0 0111
Q ss_pred ccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHHHHh
Q 001544 1004 TEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRDFLL 1052 (1057)
Q Consensus 1004 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~ 1052 (1057)
....+...+..+++.+..++.+||+.||++||++.|++..|+.+...+.
T Consensus 260 ~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 260 VGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHIS 308 (362)
T ss_pred hcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhc
Confidence 0111222234488899999999999999999999999999999987654
No 6
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.9e-44 Score=394.78 Aligned_cols=248 Identities=24% Similarity=0.364 Sum_probs=214.4
Q ss_pred CCCCCCceeccccCeEEEEEEe-cCCcEEEEEEeecc---chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQ---HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
.+|...+.||+|||+.||.++. .+|+.||+|++.+. .....+.+.+||++.++++|||||+++++|++.++.|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5688899999999999999987 88999999999643 4556788899999999999999999999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
|+|++++|.+++. .++++++.+++.+++||+.|+.||| +.+|+|||||..|+|++++.++||+|||+|..+...+
T Consensus 98 ELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~- 172 (592)
T KOG0575|consen 98 ELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG- 172 (592)
T ss_pred EecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHH---hcCceecccchhheeecCcCcEEecccceeeeecCcc-
Confidence 9999999999877 6678999999999999999999999 9999999999999999999999999999999885432
Q ss_pred ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccc
Q 001544 925 SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLIT 1004 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1057)
......+||+.|+|||++....++..+||||+|||+|-|++|++||+... +.+.++....
T Consensus 173 -Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~-----------------vkety~~Ik~-- 232 (592)
T KOG0575|consen 173 -ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT-----------------VKETYNKIKL-- 232 (592)
T ss_pred -cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch-----------------HHHHHHHHHh--
Confidence 33445689999999999999999999999999999999999999997621 1111111111
Q ss_pred cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1005 EDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.....+...+.+..++|.++++++|.+|||+.+|+.|
T Consensus 233 --~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 233 --NEYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred --cCcccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 1122234677889999999999999999999999986
No 7
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-44 Score=394.39 Aligned_cols=254 Identities=31% Similarity=0.521 Sum_probs=218.2
Q ss_pred CCCCceeccccCeEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCC
Q 001544 771 FSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNG 850 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~g 850 (1057)
++..+.||+|.||+||.|.++....||||.++.. ....++|.+|+++|++++|++||+++|+|..++..|||||||+.|
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~G 286 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKG 286 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccC
Confidence 3445789999999999999998889999999654 333478889999999999999999999999989999999999999
Q ss_pred ChhHHHhc-CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccc
Q 001544 851 SLEKCLYS-GNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQT 929 (1057)
Q Consensus 851 sL~~~l~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 929 (1057)
+|.++++. .+..+...+.+.++.|||+|++||+ ++++|||||.++|||++++..+||+|||+|+.. .++.+....
T Consensus 287 sLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~-~d~~Y~~~~ 362 (468)
T KOG0197|consen 287 SLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFGLARLI-GDDEYTASE 362 (468)
T ss_pred cHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEccccccccc-CCCceeecC
Confidence 99999987 5567999999999999999999999 999999999999999999999999999999943 344444444
Q ss_pred cccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchh
Q 001544 930 QTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKH 1008 (1057)
Q Consensus 930 ~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1057)
...-...|.|||.+..++++.|||||||||++|||+| |+.||...... +.....+.+.+
T Consensus 363 ~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~--------------------ev~~~le~GyR 422 (468)
T KOG0197|consen 363 GGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE--------------------EVLELLERGYR 422 (468)
T ss_pred CCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH--------------------HHHHHHhccCc
Confidence 4455678999999999999999999999999999999 77776652211 11122345567
Q ss_pred hHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHH
Q 001544 1009 FAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRD 1049 (1057)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~ 1049 (1057)
.+.++.||.++.++|..||+.+|++|||+..+...++++..
T Consensus 423 lp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 423 LPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred CCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 77778899999999999999999999999999888888754
No 8
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.3e-44 Score=374.37 Aligned_cols=253 Identities=24% Similarity=0.362 Sum_probs=206.2
Q ss_pred CCCCCCceeccccCeEEEEEE-ecCCcEEEEEEeeccch-------hHHHHHHHHHHHHHhcCCCCceeEeeeeccCCee
Q 001544 769 NGFSENNLIGRGSFGSVYIAR-LQNGIEVAVKTFDLQHE-------RAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFK 840 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 840 (1057)
+.|.+.+.+|+|+||.|-+|. .++|+.||||++++..- ......++|+++|++++|||||+++++|++.+..
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~ 251 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS 251 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence 356778999999999999996 45799999999965421 1123467999999999999999999999999999
Q ss_pred EEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC---CcEEEEcccccc
Q 001544 841 ALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN---MVAHLSDFGIAK 917 (1057)
Q Consensus 841 ~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~---~~~kl~Dfg~a~ 917 (1057)
|+||||++||+|.+.+-..+. +.+..-..+++|++.|+.||| +.||+||||||+|||+..+ ..+||+|||+|+
T Consensus 252 YmVlE~v~GGeLfd~vv~nk~-l~ed~~K~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK 327 (475)
T KOG0615|consen 252 YMVLEYVEGGELFDKVVANKY-LREDLGKLLFKQLLTAVKYLH---SQGIIHRDIKPENILLSNDAEDCLLKITDFGLAK 327 (475)
T ss_pred EEEEEEecCccHHHHHHhccc-cccchhHHHHHHHHHHHHHHH---HcCcccccCCcceEEeccCCcceEEEecccchhh
Confidence 999999999999998876553 777778899999999999999 9999999999999999765 889999999999
Q ss_pred cccCCCCccccccccccccccCccccCCCC---CCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHH
Q 001544 918 LLIGEDQSMTQTQTLATLGYMAPEYGREGR---VSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMM 994 (1057)
Q Consensus 918 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~---~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1057)
... ........+||+.|.|||++.... +..|+|+||+||++|-+++|.+||.+...... +.
T Consensus 328 ~~g---~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s-------------l~ 391 (475)
T KOG0615|consen 328 VSG---EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS-------------LK 391 (475)
T ss_pred ccc---cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc-------------HH
Confidence 753 334455678999999999987654 33488999999999999999999987433221 11
Q ss_pred HhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 995 KIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 995 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
+-+-... .....+.+..++.+..++|.+|+..||++|||+.|+++|=
T Consensus 392 eQI~~G~---y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hp 438 (475)
T KOG0615|consen 392 EQILKGR---YAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHP 438 (475)
T ss_pred HHHhcCc---ccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcCh
Confidence 1111111 1122345567888999999999999999999999999873
No 9
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-43 Score=365.79 Aligned_cols=199 Identities=30% Similarity=0.523 Sum_probs=180.6
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc--chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ--HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
..+|...+.||+|+||+||+|+.. ++..||||.+... ..+..+.+..|+++++.++|||||++++++..++..|+||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 457888888999999999999854 6899999999655 4566677899999999999999999999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC------CcEEEEccccccc
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN------MVAHLSDFGIAKL 918 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~------~~~kl~Dfg~a~~ 918 (1057)
|||+||+|.++++..+ .+++.+++.++.|+|.|+++|| +++||||||||.|||++.. -.+||+|||+|+.
T Consensus 89 EyC~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~ 164 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARF 164 (429)
T ss_pred EeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCceEEecccchhhh
Confidence 9999999999998876 4999999999999999999999 9999999999999999864 4689999999998
Q ss_pred ccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCc
Q 001544 919 LIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDE 973 (1057)
Q Consensus 919 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~ 973 (1057)
+. ........+|++-|||||++..++|+.|+|+||+|+++|||++|+.||+.
T Consensus 165 L~---~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a 216 (429)
T KOG0595|consen 165 LQ---PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA 216 (429)
T ss_pred CC---chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence 74 33445567899999999999999999999999999999999999999985
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-44 Score=356.06 Aligned_cols=255 Identities=25% Similarity=0.382 Sum_probs=206.4
Q ss_pred CCCCCCceeccccCeEEEEEE-ecCCcEEEEEEeecc--chhHHHHHHHHHHHHHhcCCCCceeEee-eeccCC-eeEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIAR-LQNGIEVAVKTFDLQ--HERAFKSFDTECEVMKSIRHRNLTKIIS-SCSNED-FKALI 843 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~-~~~~~~-~~~lV 843 (1057)
.+|++.++||+|+||+|||+. ..+|..||.|.+.-. +.+..++...|+.++++++|||||++++ .+.++. ..++|
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 357788999999999999996 668999999988533 4566788999999999999999999998 455544 48999
Q ss_pred EEEccCCChhHHHhc---CCccCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEEccCCCCCeeeCCCCcEEEEcccccccc
Q 001544 844 LEYMRNGSLEKCLYS---GNYILDIFQRLNIMIDVASALEYLHFGYSAP-VIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 919 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 919 (1057)
|||+++|+|.+.++. .+..+++..+++++.|+++||.++|....++ |+||||||.||+++.+|.+|++|||+++.+
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 999999999988753 4467999999999999999999999432232 889999999999999999999999999987
Q ss_pred cCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhc
Q 001544 920 IGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDA 999 (1057)
Q Consensus 920 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1057)
.. ........+|||.||+||.+.+..|++|+||||+||++|||+.-++||.+. .+. +..+-+..
T Consensus 179 ~s--~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~---------~L~~KI~q 242 (375)
T KOG0591|consen 179 SS--KTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLL---------SLCKKIEQ 242 (375)
T ss_pred cc--hhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHH---------HHHHHHHc
Confidence 43 334455678999999999999999999999999999999999999998762 111 11122211
Q ss_pred ccccccchhhHHH-HHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHH
Q 001544 1000 NLLITEDKHFAAK-EQCASSVFNLAMECTVESPDERITAKEIVRRLL 1045 (1057)
Q Consensus 1000 ~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1045 (1057)
. ...+.+ +.++.++.+++..|+.+||+.||+...+++.++
T Consensus 243 g------d~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 243 G------DYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred C------CCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 1 111122 567889999999999999999998655555443
No 11
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=4.7e-43 Score=350.83 Aligned_cols=267 Identities=22% Similarity=0.310 Sum_probs=209.2
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc--chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ--HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
+.|+...++|+|+||+|||++.+ +|+.||||+|... ++...+-..+|++++++++|+|+|.++++|......++|||
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 46778899999999999999866 6999999999433 34456778899999999999999999999999999999999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
|++..-|++ +.....-.+...+.++++|+++|+.|+| +++++||||||+|||++.+|.+|+||||+|+.+.. ..
T Consensus 82 ~~dhTvL~e-Le~~p~G~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~--pg 155 (396)
T KOG0593|consen 82 YCDHTVLHE-LERYPNGVPSELVKKYLYQLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA--PG 155 (396)
T ss_pred ecchHHHHH-HHhccCCCCHHHHHHHHHHHHHHhhhhh---hcCeecccCChhheEEecCCcEEeccchhhHhhcC--Cc
Confidence 999855544 5555556899999999999999999999 99999999999999999999999999999998853 44
Q ss_pred cccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhc---cchhHHHhhhcc-
Q 001544 926 MTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDF---LPISMMKIIDAN- 1000 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~- 1000 (1057)
..++.++.|.+|+|||.+.+ ..|+..+||||+||++.||++|.+-|.+. .+.+.-..+... .......++...
T Consensus 156 d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~--SDiDQLy~I~ktLG~L~prhq~iF~~N~ 233 (396)
T KOG0593|consen 156 DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGR--SDIDQLYLIRKTLGNLIPRHQSIFSSNP 233 (396)
T ss_pred chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCc--chHHHHHHHHHHHcccCHHHHHHhccCC
Confidence 56778889999999998877 67999999999999999999999877542 222211111111 111222222211
Q ss_pred -----cccccchhhH---HHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1001 -----LLITEDKHFA---AKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1001 -----~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.........+ ..+..+..+.+++..|++.||++|++.+|++.|
T Consensus 234 ~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 234 FFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred ceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 1111111111 112345678999999999999999999999876
No 12
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=3.4e-46 Score=385.95 Aligned_cols=493 Identities=29% Similarity=0.432 Sum_probs=341.7
Q ss_pred eeEEeeecccCcccccccccCCCCCcEEeCCCCCccccCCcccccccccceeecccccccCCCCccccccCCCCeEeccC
Q 001544 73 VTALNISYLSLTGNIPRQLGNLSSLEILDLNFNRLSGEIPWELGNLAKLEKLLLHNNFLTGTIPFSIFKLSSLLDLKLSD 152 (1057)
Q Consensus 73 v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 152 (1057)
...+.+++|.+. .+.+.+.+|..|.+|++++|+++ +.|++++.+..++.|+.++|+++ .+|.+++.+.+|++|++++
T Consensus 47 l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~ 123 (565)
T KOG0472|consen 47 LQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSS 123 (565)
T ss_pred hhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhccc
Confidence 667788888887 66777888999999999999988 78889999999999999999998 8888999999999999999
Q ss_pred CCCCCCCCcccccCCCCCceeEccCCcccccCchhhhccccCCeeEeeccCCccccCccccCCCCcccEEEeeccccccC
Q 001544 153 NNLTGTIPSHNLGNLSSLQLLDLSDNQLSGSIPSFIFKISSLQALHFGNNRLSGELPANICDNLPFLNFFSVYKNMFYGG 232 (1057)
Q Consensus 153 n~l~~~~p~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~l~~n~~~~~ 232 (1057)
|.+. .+|+ .++.+-.|..|+..+|+++ ..|..++.+.+|..|++.+|+++ +.|+..
T Consensus 124 n~~~-el~~-~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~-~l~~~~-------------------- 179 (565)
T KOG0472|consen 124 NELK-ELPD-SIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLK-ALPENH-------------------- 179 (565)
T ss_pred ccee-ecCc-hHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchh-hCCHHH--------------------
Confidence 9887 5554 3788888888888888887 67777777777777777777776 333321
Q ss_pred ccccccCCCCCcEEEccCCCCcCCccccccCcCCCcEEeeeccccccccCccccccccccEEEeecCccccccCcccccc
Q 001544 233 ISSTLSNCKHLRILDLSFNDLWGDIPKEIGNLTKLKELFLDFNILQGEIPHTVGNLHNLEYLSLVNNELVGTVPATIFNV 312 (1057)
Q Consensus 233 ~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 312 (1057)
-+++.|++||...|.++ .+|+.++.+.+|.-|||..|+|. ..| +|.++..|.+|.++.|+|.
T Consensus 180 -----i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~---------- 241 (565)
T KOG0472|consen 180 -----IAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE---------- 241 (565)
T ss_pred -----HHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH----------
Confidence 22666777777777664 56666666666666666666666 444 5555555665555555554
Q ss_pred ccccEEEecCCccccCCCCCcccCCCCCceEEecCccccccCCccccccccccccccccccccccccchhcccccccEEe
Q 001544 313 STLKLIELSNNTFFGSLPSSTDVQLPNLEELYLWGNNFSGTLPSFIFNASNLSKLSLGDNSFSGLIPNTFGNLRNLKRLR 392 (1057)
Q Consensus 313 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 392 (1057)
.+|......++++..|||.+|+++ +.|+.++-+.+|++||+|+|.|++. |..++++ .|+.|-
T Consensus 242 ---------------~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~L-p~sLgnl-hL~~L~ 303 (565)
T KOG0472|consen 242 ---------------MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISSL-PYSLGNL-HLKFLA 303 (565)
T ss_pred ---------------hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccccC-Ccccccc-eeeehh
Confidence 445555556777777777777777 7888888889999999999999875 6778888 899999
Q ss_pred ccCcccCCCccccccc--cCCCcchhhhhccCCCcccccccccccccccccEEEcCCCcccccccccccCccCCcEEEcc
Q 001544 393 LYNNYLTSPELSFLSS--LSNCKYLEIIALSGNPLNGIIPMSAGNLSHSLEELFMPDCNVSGRIPKEIGNLANLVTLDLG 470 (1057)
Q Consensus 393 L~~N~l~~~~~~~~~~--l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls 470 (1057)
+.+|++.++....++. -.-+++|+. ....-.++.. .+- ..+.-............+.+.+.|+++
T Consensus 304 leGNPlrTiRr~ii~~gT~~vLKyLrs-~~~~dglS~s--e~~----------~e~~~t~~~~~~~~~~~~i~tkiL~~s 370 (565)
T KOG0472|consen 304 LEGNPLRTIRREIISKGTQEVLKYLRS-KIKDDGLSQS--EGG----------TETAMTLPSESFPDIYAIITTKILDVS 370 (565)
T ss_pred hcCCchHHHHHHHHcccHHHHHHHHHH-hhccCCCCCC--ccc----------ccccCCCCCCcccchhhhhhhhhhccc
Confidence 9999988765544431 112334432 0000011000 000 000000000011112233455566666
Q ss_pred CCcCCCCCCcccccccc---cceeecccccCcccCCcccccccccceEEecCeeeeecCCccccCcccccccccCCcccc
Q 001544 471 GNKFNGSIPIALGKLQK---LQLLNLDDNKLEGSIPDDICGLVELYKLALGDNKLSGQIPACFGNLASLRELWLGPNELI 547 (1057)
Q Consensus 471 ~N~i~~~~p~~~~~l~~---L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 547 (1057)
.-+++ .+|.....--+ .+..+++.|++. + +|..+..+..+...-+..|+..
T Consensus 371 ~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-e------------------------lPk~L~~lkelvT~l~lsnn~i 424 (565)
T KOG0472|consen 371 DKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-E------------------------LPKRLVELKELVTDLVLSNNKI 424 (565)
T ss_pred ccccc-cCCHHHHHHhhhcceEEEecccchHh-h------------------------hhhhhHHHHHHHHHHHhhcCcc
Confidence 66665 33433222112 445555555554 3 4444444444433333333344
Q ss_pred ccccccccccccccEEEeccccccCCCchhhccccccceeccccccccccccccccCccccceecccccccccccCcccc
Q 001544 548 SFIPSTFWNIKDIMYVNFSSNFLTGPLPLEIENLKALTTLDFSMNNLSGVIPTTIGGLKGLQYLFLGHNRLQGSIPDSVG 627 (1057)
Q Consensus 548 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 627 (1057)
++.|..+..+++|.+|+|++|.+. .+|.+++.+..|+.||+|.|+|. ..|+.+..+..|+.+-.++|++....|+.+.
T Consensus 425 sfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~ 502 (565)
T KOG0472|consen 425 SFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLK 502 (565)
T ss_pred ccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhh
Confidence 455556666667777888777777 47888888889999999999997 7899988888899888888999977777799
Q ss_pred ccCccceecccCccccCCCcccccCcccccccccCCCcccCcCCC
Q 001544 628 DLISLKSLNLSNNNLSGPIPTSLEKLSDLKELNLSFNKLEGEIPR 672 (1057)
Q Consensus 628 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~ 672 (1057)
+|.+|.+|||.+|.+. .+|+.++++++|+.|+++||+|. .|+
T Consensus 503 nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr--~Pr 544 (565)
T KOG0472|consen 503 NMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR--QPR 544 (565)
T ss_pred hhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC--CCH
Confidence 9999999999999998 89999999999999999999998 554
No 13
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.8e-42 Score=391.61 Aligned_cols=259 Identities=30% Similarity=0.526 Sum_probs=222.5
Q ss_pred CCCCCCceeccccCeEEEEEEec------CCcEEEEEEeeccchh-HHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ------NGIEVAVKTFDLQHER-AFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKA 841 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 841 (1057)
.+....+.||+|+||+||+|+.. +.+.||||.++...+. ..++|++|+++++.++|||||+++|.|.+++..+
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~ 565 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC 565 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence 34455688999999999999743 3567999999876655 7899999999999999999999999999999999
Q ss_pred EEEEEccCCChhHHHhcCC-------------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcE
Q 001544 842 LILEYMRNGSLEKCLYSGN-------------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVA 908 (1057)
Q Consensus 842 lV~E~~~~gsL~~~l~~~~-------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 908 (1057)
+|+|||..|||.+++.... .+++..+.+.||.|||.|++||- ++.+|||||..+|+||.++..|
T Consensus 566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRDLATRNCLVge~l~V 642 (774)
T KOG1026|consen 566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVHRDLATRNCLVGENLVV 642 (774)
T ss_pred EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccccchhhhhceeccceEE
Confidence 9999999999999986422 23888999999999999999999 9999999999999999999999
Q ss_pred EEEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhh
Q 001544 909 HLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVND 987 (1057)
Q Consensus 909 kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 987 (1057)
||+|||+++.+...+.+.......-..+|||||.+..++++.+||||||||++||+++ |+.||.+....+
T Consensus 643 KIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E--------- 713 (774)
T KOG1026|consen 643 KISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE--------- 713 (774)
T ss_pred EecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH---------
Confidence 9999999998877777766656677889999999999999999999999999999999 788876632221
Q ss_pred ccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHHH
Q 001544 988 FLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRDF 1050 (1057)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 1050 (1057)
+.+.+. .+..++.++.||.++++||..||+..|++||+++||-..|+...+.
T Consensus 714 -----VIe~i~------~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 714 -----VIECIR------AGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred -----HHHHHH------cCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence 222221 1223556688999999999999999999999999999999887654
No 14
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-42 Score=372.69 Aligned_cols=262 Identities=26% Similarity=0.411 Sum_probs=213.9
Q ss_pred hCCCCCCceeccccCeEEEEEEecCCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
.+.+.+.+.||+|.||+||+|++. -.||||+++... +...+.|+.|+.++++-||.||+=+.|||..+.. .||+.
T Consensus 391 ~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTq 467 (678)
T KOG0193|consen 391 PEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQ 467 (678)
T ss_pred HHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeeh
Confidence 344567789999999999999987 369999997553 4578899999999999999999999999998888 99999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
+|+|.+|+.++|-.+..++..+.+.||+|||+|+.||| .++|||||+|..|||+.+++.|||+|||++..-......
T Consensus 468 wCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~ 544 (678)
T KOG0193|consen 468 WCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGE 544 (678)
T ss_pred hccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEccCCcEEEecccceeeeeeeccc
Confidence 99999999999998888999999999999999999999 999999999999999999999999999999754332223
Q ss_pred cccccccccccccCccccCCC---CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccc
Q 001544 926 MTQTQTLATLGYMAPEYGREG---RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLL 1002 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~~---~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1057)
.......|...|||||+++.+ .|++.+||||||+|+|||++|..||.. ...+.. -|.- ... ..
T Consensus 545 ~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi-~~~dqI--ifmV--GrG--------~l- 610 (678)
T KOG0193|consen 545 QQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSI-QNRDQI--IFMV--GRG--------YL- 610 (678)
T ss_pred cccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCC-CChhhe--EEEe--ccc--------cc-
Confidence 334445677789999998754 589999999999999999999999873 111110 0100 000 00
Q ss_pred cccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHHHH
Q 001544 1003 ITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRDFL 1051 (1057)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~ 1051 (1057)
..........|+.++++|+..||..++++||.+.+++..|+++..+.
T Consensus 611 --~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~ 657 (678)
T KOG0193|consen 611 --MPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSL 657 (678)
T ss_pred --CccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcc
Confidence 00111223467889999999999999999999999999998887643
No 15
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-41 Score=351.47 Aligned_cols=250 Identities=28% Similarity=0.363 Sum_probs=205.8
Q ss_pred HhCCCCCCceeccccCeEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEE
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKAL 842 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 842 (1057)
..++|++.++||+|+||+||+++. ++++.+|+|++++.. ....+...+|..++.+++||+||+++-.|++.+..|+
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 356899999999999999999975 468999999996542 3456778899999999999999999999999999999
Q ss_pred EEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCC
Q 001544 843 ILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 922 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 922 (1057)
|+||+.||.|..++++.+. +++..+.-++.+|+.||.||| +++|||||+||+|||+|++|+++|+|||+++....
T Consensus 103 Vld~~~GGeLf~hL~~eg~-F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~- 177 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREGR-FSEDRARFYLAEIVLALGYLH---SKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK- 177 (357)
T ss_pred EEeccCCccHHHHHHhcCC-cchhHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEEEeccccchhccc-
Confidence 9999999999999987664 889999999999999999999 99999999999999999999999999999985422
Q ss_pred CCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccc
Q 001544 923 DQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLL 1002 (1057)
Q Consensus 923 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1057)
........+||+.|||||++.+..++..+|.||+|+++|||++|.+||...... ++++....
T Consensus 178 -~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~-----------------~~~~~I~~ 239 (357)
T KOG0598|consen 178 -DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVK-----------------KMYDKILK 239 (357)
T ss_pred -CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHH-----------------HHHHHHhc
Confidence 222333468999999999999999999999999999999999999998762111 11111111
Q ss_pred cccchhhHHHHHHHHHHHHHHhHcccCCCCCCC----CHHHHHH
Q 001544 1003 ITEDKHFAAKEQCASSVFNLAMECTVESPDERI----TAKEIVR 1042 (1057)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp----s~~evl~ 1042 (1057)
.. ....+...+.+..+++.+.+..||++|. .+.++.+
T Consensus 240 ~k---~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~ 280 (357)
T KOG0598|consen 240 GK---LPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKR 280 (357)
T ss_pred Cc---CCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhc
Confidence 00 0111123567889999999999999996 4555443
No 16
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=7.3e-41 Score=330.10 Aligned_cols=265 Identities=23% Similarity=0.355 Sum_probs=207.1
Q ss_pred CCCCCCceeccccCeEEEEEE-ecCCcEEEEEEeeccch--hHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIAR-LQNGIEVAVKTFDLQHE--RAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
.+|...+++|+|.||.||+|+ .++|+.||||+++.... .......+|++.++.++|+||+.++++|...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 367778999999999999997 45799999999975432 233566889999999999999999999999999999999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
||+. +|+..++.....++..++..++.++++|++||| .+.|+||||||.|+|++++|.+||+|||+|+.+......
T Consensus 82 fm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~ 157 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI 157 (318)
T ss_pred eccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcc
Confidence 9976 999999999989999999999999999999999 999999999999999999999999999999988554433
Q ss_pred cccccccccccccCccccCCC-CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhh---cc---chh---HHH
Q 001544 926 MTQTQTLATLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVND---FL---PIS---MMK 995 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~---~~---~~~---~~~ 995 (1057)
.+..+.|.+|+|||.+.+. .|+..+|+||.||++.||+-|.+-|.+ +.++.+.... .. +.. +..
T Consensus 158 --~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG----~sDidQL~~If~~LGTP~~~~WP~~~~ 231 (318)
T KOG0659|consen 158 --QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPG----DSDIDQLSKIFRALGTPTPDQWPEMTS 231 (318)
T ss_pred --cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCC----CchHHHHHHHHHHcCCCCcccCccccc
Confidence 3333789999999988875 489999999999999999999875543 2222211100 00 000 111
Q ss_pred hhhccc--ccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 996 IIDANL--LITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 996 ~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.-|... ..........-..++.+..+++.+|+.++|.+|++++|+++|
T Consensus 232 lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 232 LPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 111000 000000001123456778999999999999999999999876
No 17
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.1e-41 Score=360.04 Aligned_cols=267 Identities=28% Similarity=0.355 Sum_probs=210.8
Q ss_pred CCCCCCceeccccCeEEEEEE-ecCCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccC--CeeEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIAR-LQNGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNE--DFKALI 843 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV 843 (1057)
+.|+..++||+|.||.||+|+ ..+|+.||+|+++... +....-..+||.+|+++.||||+++.+...+. ...|+|
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 356667899999999999997 5689999999997654 44456678999999999999999999988765 789999
Q ss_pred EEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC
Q 001544 844 LEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 923 (1057)
||||+. +|.-++...+..+++.++..++.|++.||+|+| +++|+|||||.+|||+|.+|.+||+|||+|+++....
T Consensus 197 FeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~ 272 (560)
T KOG0600|consen 197 FEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG 272 (560)
T ss_pred Eecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCCCEEeccccceeeccCCC
Confidence 999988 999999888878999999999999999999999 9999999999999999999999999999999875433
Q ss_pred CccccccccccccccCccccCCC-CCCccchHHHHHHHHHHHhhCCCCCCcccccc-----------cchhhhhhhccch
Q 001544 924 QSMTQTQTLATLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRRKPTDEIFSGE-----------MTLKHWVNDFLPI 991 (1057)
Q Consensus 924 ~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~-----------~~~~~~~~~~~~~ 991 (1057)
....+..+.|.+|+|||++.+. .|+.++|+||.|||+.||++|++.|....+-+ .....|.....+
T Consensus 273 -~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP- 350 (560)
T KOG0600|consen 273 -SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLP- 350 (560)
T ss_pred -CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCC-
Confidence 3457778899999999988765 68999999999999999999999876522111 111123211111
Q ss_pred hHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 992 SMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
....+.+....... -.+.....+....+|+..+|..||++|.||.+++++
T Consensus 351 -~~~~~kp~~~y~r~-l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 351 -HATIFKPQQPYKRR-LRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred -cccccCCCCcccch-HHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 00111111100000 111234567889999999999999999999999864
No 18
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-41 Score=366.98 Aligned_cols=250 Identities=26% Similarity=0.401 Sum_probs=215.6
Q ss_pred CCCCCCceeccccCeEEEEEE-ecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 769 NGFSENNLIGRGSFGSVYIAR-LQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
..|+...+||+|+.|.||.|. ..+++.||||++........+-+.+|+.+|+..+|+|||.+++.|..++..++|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 357777899999999999996 5578999999998887777788999999999999999999999998899999999999
Q ss_pred cCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccc
Q 001544 848 RNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT 927 (1057)
Q Consensus 848 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 927 (1057)
+||+|.+.+.... +++.++..|++++++||+||| .++|+|||||.+|||++.+|.+||+|||++..+..... .
T Consensus 353 ~ggsLTDvVt~~~--~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~--K 425 (550)
T KOG0578|consen 353 EGGSLTDVVTKTR--MTEGQIAAICREILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS--K 425 (550)
T ss_pred CCCchhhhhhccc--ccHHHHHHHHHHHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeeeccccccC--c
Confidence 9999999887655 899999999999999999999 99999999999999999999999999999988754332 4
Q ss_pred cccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccch
Q 001544 928 QTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDK 1007 (1057)
Q Consensus 928 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1057)
....+||+.|||||+.....|++|+||||+|++++||+-|.+||-. +..-.+-| -+. .....
T Consensus 426 R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYln---E~PlrAly----------LIa-----~ng~P 487 (550)
T KOG0578|consen 426 RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLN---ENPLRALY----------LIA-----TNGTP 487 (550)
T ss_pred cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccC---CChHHHHH----------HHh-----hcCCC
Confidence 5567899999999999999999999999999999999999999743 11111111 111 11223
Q ss_pred hhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1008 HFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
....++.+++++.+|+.+||..||++|++|+|+++|
T Consensus 488 ~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 488 KLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred CcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 344556789999999999999999999999999987
No 19
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-42 Score=362.28 Aligned_cols=267 Identities=22% Similarity=0.326 Sum_probs=210.0
Q ss_pred hCCCCCCceeccccCeEEEEEE-ecCCcEEEEEEeeccchhH-HHHHHHHHHHHHhcC-CCCceeEeeeeccCC-eeEEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIAR-LQNGIEVAVKTFDLQHERA-FKSFDTECEVMKSIR-HRNLTKIISSCSNED-FKALI 843 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~-~~~lV 843 (1057)
.++|...++||.|.||.||+|+ ..+|..||||+++..-..+ ...=.+|++.++++. ||||+++.+.+.+.+ ..|+|
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 4578888999999999999997 4579999999986543322 223457999999998 999999999998888 99999
Q ss_pred EEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC
Q 001544 844 LEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 923 (1057)
||||+. +|.+.+..+++.+++.++..|+.||++||+|+| .+|+.|||+||+|||+.....+||+|||+||-+.
T Consensus 89 fE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~--- 161 (538)
T KOG0661|consen 89 FEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADFGLAREVR--- 161 (538)
T ss_pred HHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHH---hcCcccccCChhheEecccceeEecccccccccc---
Confidence 999977 999999998999999999999999999999999 9999999999999999999999999999999763
Q ss_pred CccccccccccccccCcccc-CCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccc-----------hhhhhhhccch
Q 001544 924 QSMTQTQTLATLGYMAPEYG-REGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMT-----------LKHWVNDFLPI 991 (1057)
Q Consensus 924 ~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~-----------~~~~~~~~~~~ 991 (1057)
....++.++.|.+|+|||++ +.+.|+.+.|+||+|||++|+.+-++-|.+..+-+.- ...|... .
T Consensus 162 SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg---~ 238 (538)
T KOG0661|consen 162 SKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEG---Y 238 (538)
T ss_pred cCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhH---H
Confidence 45567888999999999975 5677899999999999999999999877653221111 1111110 0
Q ss_pred hHHHhhhcccccccchhh-HHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 992 SMMKIIDANLLITEDKHF-AAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
.....+.-......+... .....++.++.+++.+|+++||++||||.|+++|-
T Consensus 239 ~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~p 292 (538)
T KOG0661|consen 239 NLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHP 292 (538)
T ss_pred HHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence 011111111111111111 11234678899999999999999999999999873
No 20
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9e-41 Score=356.20 Aligned_cols=258 Identities=29% Similarity=0.458 Sum_probs=207.4
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCC--eeEEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNED--FKALILE 845 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lV~E 845 (1057)
.+|...+.||+|+||+||++... +|+..|||.+........+.+++|++++++++|||||+++|.....+ ..++.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 35667799999999999999865 49999999987654333677899999999999999999999854444 6899999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC-CCcEEEEcccccccccC-CC
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD-NMVAHLSDFGIAKLLIG-ED 923 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~Dfg~a~~~~~-~~ 923 (1057)
|+++|+|.+++...+..+++..+..+++||++||+||| +++||||||||+|||++. ++.+||+|||+++.... ..
T Consensus 97 y~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~ 173 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT 173 (313)
T ss_pred ccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCccccccccccc
Confidence 99999999999876656999999999999999999999 999999999999999999 79999999999987643 11
Q ss_pred CccccccccccccccCccccCCC-CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccc
Q 001544 924 QSMTQTQTLATLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLL 1002 (1057)
Q Consensus 924 ~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1057)
.........||+.|||||++..+ ...+++||||+||++.||+||++||..... ...+ ...+....
T Consensus 174 ~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~----~~~~--------~~~ig~~~-- 239 (313)
T KOG0198|consen 174 KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFE----EAEA--------LLLIGRED-- 239 (313)
T ss_pred cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcc----hHHH--------HHHHhccC--
Confidence 22334456799999999999854 344699999999999999999999876300 0000 00110000
Q ss_pred cccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHh
Q 001544 1003 ITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKI 1047 (1057)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 1047 (1057)
.....+..++.+..+++.+|+..+|++||||.|+++|..-.
T Consensus 240 ----~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~ 280 (313)
T KOG0198|consen 240 ----SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLK 280 (313)
T ss_pred ----CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhh
Confidence 01122345778899999999999999999999999987543
No 21
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-40 Score=358.42 Aligned_cols=254 Identities=27% Similarity=0.434 Sum_probs=211.8
Q ss_pred HHhCCCCCCceeccccCeEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCCee
Q 001544 766 QATNGFSENNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQH---ERAFKSFDTECEVMKSI-RHRNLTKIISSCSNEDFK 840 (1057)
Q Consensus 766 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 840 (1057)
...++|...+.||+|+|++||+|+. .+++.||||++.+.. +...+-+.+|-++|.++ .||.|++++..|.++...
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 4567899999999999999999974 479999999986542 23335567788999999 899999999999999999
Q ss_pred EEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccccccccc
Q 001544 841 ALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLI 920 (1057)
Q Consensus 841 ~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 920 (1057)
|+|+||+++|+|.+++++.+ .+++...+-++.+|+.||+||| ++|||||||||+|||+|+||++||+|||.|+.+.
T Consensus 150 YFvLe~A~nGdll~~i~K~G-sfde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~ 225 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKYG-SFDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDGHIKITDFGSAKILS 225 (604)
T ss_pred EEEEEecCCCcHHHHHHHhC-cchHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCCcEEEeeccccccCC
Confidence 99999999999999998876 4999999999999999999999 9999999999999999999999999999999875
Q ss_pred CCCCc---------cc--cccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhcc
Q 001544 921 GEDQS---------MT--QTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFL 989 (1057)
Q Consensus 921 ~~~~~---------~~--~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 989 (1057)
+.... .. ....+||..|.+||++..+..++.+|+|+|||++|+|+.|++||.+..+ |.
T Consensus 226 ~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne-------yl---- 294 (604)
T KOG0592|consen 226 PSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE-------YL---- 294 (604)
T ss_pred hhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH-------HH----
Confidence 43211 11 1346899999999999999999999999999999999999999976211 10
Q ss_pred chhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 990 PISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 990 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
-..++++.. +..++..++.+.+|+.+.+..||.+|+|..++.+|-
T Consensus 295 --iFqkI~~l~--------y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp 339 (604)
T KOG0592|consen 295 --IFQKIQALD--------YEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHP 339 (604)
T ss_pred --HHHHHHHhc--------ccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCc
Confidence 012222221 222345567889999999999999999999988874
No 22
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=3e-41 Score=376.10 Aligned_cols=271 Identities=25% Similarity=0.452 Sum_probs=226.5
Q ss_pred cccCCHHHHHHHhCC---------CCCCceeccccCeEEEEEEec----CCcEEEEEEeeccc-hhHHHHHHHHHHHHHh
Q 001544 756 WRRFSYLELFQATNG---------FSENNLIGRGSFGSVYIARLQ----NGIEVAVKTFDLQH-ERAFKSFDTECEVMKS 821 (1057)
Q Consensus 756 ~~~~~~~~~~~~~~~---------~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~ 821 (1057)
.+.++|+|-.++... ..+.++||.|.||.||+|+++ ....||||.++... +++..+|..|+.+|.+
T Consensus 607 iDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQ 686 (996)
T KOG0196|consen 607 IDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQ 686 (996)
T ss_pred cCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhccc
Confidence 445666665444443 346789999999999999876 24579999997653 5678899999999999
Q ss_pred cCCCCceeEeeeeccCCeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCee
Q 001544 822 IRHRNLTKIISSCSNEDFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVL 901 (1057)
Q Consensus 822 l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nil 901 (1057)
+.||||+++.|........+||+|||++|+|+.+++..+..+.+.+...+.++||.|+.||. +.++|||||.++|||
T Consensus 687 FdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLs---dm~YVHRDLAARNIL 763 (996)
T KOG0196|consen 687 FDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLS---DMNYVHRDLAARNIL 763 (996)
T ss_pred CCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHh---hcCchhhhhhhhhee
Confidence 99999999999999999999999999999999999999988999999999999999999999 999999999999999
Q ss_pred eCCCCcEEEEcccccccccCCCC-ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCccccccc
Q 001544 902 LDDNMVAHLSDFGIAKLLIGEDQ-SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEM 979 (1057)
Q Consensus 902 l~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~ 979 (1057)
++.+-.+|++|||+++.+..+.. ........-..+|.|||.+...+++.++|||||||+|||.++ |..||.+....
T Consensus 764 VNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQ-- 841 (996)
T KOG0196|consen 764 VNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-- 841 (996)
T ss_pred eccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchH--
Confidence 99999999999999997643321 111122223568999999999999999999999999999887 88898763221
Q ss_pred chhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHH
Q 001544 980 TLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRD 1049 (1057)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~ 1049 (1057)
++.+ ..+.+.+.+.+.+||..+.+||..||++|-.+||++.+++.+|.++.+
T Consensus 842 ------------dVIk------aIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 842 ------------DVIK------AIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred ------------HHHH------HHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 1112 223455667778999999999999999999999999999999987644
No 23
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-39 Score=342.62 Aligned_cols=262 Identities=25% Similarity=0.367 Sum_probs=211.1
Q ss_pred hCCCCCCceeccccCeEEEEEE-ecCCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIAR-LQNGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
.+.|+..++||.|..++||+|+ .+.++.||||++..+. ....+.+.+|+..|+.++||||++++..|..+...++||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 4578889999999999999997 5678999999997654 3346889999999999999999999999999999999999
Q ss_pred EccCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 846 YMRNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
||.+|++.+.+...- .-+++..+..|.+++++||.||| .+|.||||||+.|||++.+|.+||+|||.+..+...+.
T Consensus 105 fMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~ 181 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD 181 (516)
T ss_pred hhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence 999999999886532 34899999999999999999999 99999999999999999999999999999877654432
Q ss_pred cccc--ccccccccccCccccCC--CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcc
Q 001544 925 SMTQ--TQTLATLGYMAPEYGRE--GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDAN 1000 (1057)
Q Consensus 925 ~~~~--~~~~~t~~y~aPE~~~~--~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1057)
.... ...+||+.|||||++.. ..|+.|+||||||++..|+.+|..||.....-++-+...-+.. |...
T Consensus 182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~p-p~~~------- 253 (516)
T KOG0582|consen 182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDP-PTLL------- 253 (516)
T ss_pred eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCC-CCcc-------
Confidence 2211 34579999999999543 3589999999999999999999999987443322211111110 0000
Q ss_pred cccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1001 LLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
............+..+.+++..|+..||++|||++++++|
T Consensus 254 ---t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 254 ---TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred ---cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 0111223334556689999999999999999999999876
No 24
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-40 Score=356.52 Aligned_cols=242 Identities=26% Similarity=0.428 Sum_probs=206.6
Q ss_pred CceeccccCeEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCCChh
Q 001544 774 NNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNGSLE 853 (1057)
Q Consensus 774 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~ 853 (1057)
.+-+|+|+.|.||.|+++ ++.||||+++.. -+.+|+-|++++||||+.+.|+|...-.+|||||||..|.|.
T Consensus 129 LeWlGSGaQGAVF~Grl~-netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~ 200 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLH-NETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLY 200 (904)
T ss_pred hhhhccCcccceeeeecc-CceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHH
Confidence 477999999999999998 688999987532 245788999999999999999999999999999999999999
Q ss_pred HHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccccccc
Q 001544 854 KCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA 933 (1057)
Q Consensus 854 ~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 933 (1057)
..++.++. +.....+.|..+||.|+.||| .++|||||||.-||||..+..+||+|||-++..... .......|
T Consensus 201 ~VLka~~~-itp~llv~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~---STkMSFaG 273 (904)
T KOG4721|consen 201 EVLKAGRP-ITPSLLVDWSKGIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK---STKMSFAG 273 (904)
T ss_pred HHHhccCc-cCHHHHHHHHHHhhhhhHHHH---HhhHhhhccCCCceEeeccceEEeccccchHhhhhh---hhhhhhhh
Confidence 99987764 777788999999999999999 999999999999999999999999999999865322 33445689
Q ss_pred cccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHHHH
Q 001544 934 TLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKE 1013 (1057)
Q Consensus 934 t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1057)
|..|||||+++....++|+||||||||+|||+||..||.+......-+. ........+.+.
T Consensus 274 TVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwG-------------------VGsNsL~LpvPs 334 (904)
T KOG4721|consen 274 TVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWG-------------------VGSNSLHLPVPS 334 (904)
T ss_pred hHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEe-------------------ccCCcccccCcc
Confidence 9999999999999999999999999999999999999877433221111 111122445667
Q ss_pred HHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHH
Q 001544 1014 QCASSVFNLAMECTVESPDERITAKEIVRRLLKIRD 1049 (1057)
Q Consensus 1014 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~ 1049 (1057)
.|+..|+-++++||+..|..||++++++.|++-...
T Consensus 335 tcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~p 370 (904)
T KOG4721|consen 335 TCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASP 370 (904)
T ss_pred cCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCH
Confidence 899999999999999999999999999999976543
No 25
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-41 Score=362.92 Aligned_cols=365 Identities=24% Similarity=0.252 Sum_probs=239.1
Q ss_pred CCcEEEccCCCCcCCccccccCcCCCcEEeeeccccccccCccccccccccEEEeecCccccccCccccccccccEEEec
Q 001544 242 HLRILDLSFNDLWGDIPKEIGNLTKLKELFLDFNILQGEIPHTVGNLHNLEYLSLVNNELVGTVPATIFNVSTLKLIELS 321 (1057)
Q Consensus 242 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 321 (1057)
.-+.||+|+|++...-+..|.++++|++++|.+|.++ .+|.......+|+.|+|.+|.|+..-...+..++.|+.||||
T Consensus 79 ~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLS 157 (873)
T KOG4194|consen 79 QTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLS 157 (873)
T ss_pred ceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhh
Confidence 4567999999998777888899999999999999998 788766666779999999999987777888888999999999
Q ss_pred CCccccCCCCCcccCCCCCceEEecCccccccCCccccccccccccccccccccccccchhcccccccEEeccCcccCCC
Q 001544 322 NNTFFGSLPSSTDVQLPNLEELYLWGNNFSGTLPSFIFNASNLSKLSLGDNSFSGLIPNTFGNLRNLKRLRLYNNYLTSP 401 (1057)
Q Consensus 322 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 401 (1057)
.|.++ .+|...|..-+++++|+|++|+|+..-...|..+.+|..|.|++|+++.+.+..|.++++|+.|+|..|+|...
T Consensus 158 rN~is-~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~iriv 236 (873)
T KOG4194|consen 158 RNLIS-EIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIV 236 (873)
T ss_pred hchhh-cccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeee
Confidence 99887 77777777778899999999999988888888888999999999999988888888899999999988888764
Q ss_pred ccccccccCCCcchhhhhccCCCcccccccccccccccccEEEcCCCcccccccccccCccCCcEEEccCCcCCCCCCcc
Q 001544 402 ELSFLSSLSNCKYLEIIALSGNPLNGIIPMSAGNLSHSLEELFMPDCNVSGRIPKEIGNLANLVTLDLGGNKFNGSIPIA 481 (1057)
Q Consensus 402 ~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~ 481 (1057)
+.. .+..+++|+.|.|..|.+. ..--..|..+.++++|+|+.|+++..-.+|
T Consensus 237 e~l---tFqgL~Sl~nlklqrN~I~-------------------------kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~ 288 (873)
T KOG4194|consen 237 EGL---TFQGLPSLQNLKLQRNDIS-------------------------KLDDGAFYGLEKMEHLNLETNRLQAVNEGW 288 (873)
T ss_pred hhh---hhcCchhhhhhhhhhcCcc-------------------------cccCcceeeecccceeecccchhhhhhccc
Confidence 332 2223333333333333332 222234455555555555555555544555
Q ss_pred cccccccceeecccccCcccCCcccccccccceEEecCeeeeecCCccccCcccccccccCCcccccccccccccccccc
Q 001544 482 LGKLQKLQLLNLDDNKLEGSIPDDICGLVELYKLALGDNKLSGQIPACFGNLASLRELWLGPNELISFIPSTFWNIKDIM 561 (1057)
Q Consensus 482 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 561 (1057)
+.+|+.|+.|+||+|.|..+.++...-.++|+.|+|++|+|+...+.+|..+..|++|.|++|++..+-...|.++.+|+
T Consensus 289 lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~ 368 (873)
T KOG4194|consen 289 LFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLH 368 (873)
T ss_pred ccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhh
Confidence 55555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred EEEeccccccCCCch---hhccccccceeccccccccccccccccCccccceecccccccccccCccccccCccceecc
Q 001544 562 YVNFSSNFLTGPLPL---EIENLKALTTLDFSMNNLSGVIPTTIGGLKGLQYLFLGHNRLQGSIPDSVGDLISLKSLNL 637 (1057)
Q Consensus 562 ~L~Ls~N~l~~~~p~---~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 637 (1057)
.|||++|.++..+.+ .|.++++|+.|+|.+|+|..+...+|.++.+|+.|||.+|.|..+-|++|..+ .|+.|-+
T Consensus 369 ~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~ 446 (873)
T KOG4194|consen 369 KLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVM 446 (873)
T ss_pred hhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhh
Confidence 555555555433322 23444455555555555544444445555555555555555544444444444 4444443
No 26
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.7e-39 Score=349.52 Aligned_cols=248 Identities=28% Similarity=0.421 Sum_probs=211.2
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
++|.+.+.||+|+||.||||+.+ +.+.||+|.+.+.. ++..+.+.+|++++++++||||+.++++|+...+.++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 46778889999999999999755 68999999996543 4557789999999999999999999999999999999999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
|+.| +|..++...+. +++.++..|+.+++.||.||| +.+|.|||+||.||+++..|.+|+||||+|+.+.. ..
T Consensus 82 ~a~g-~L~~il~~d~~-lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~--~t 154 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDGK-LPEEQVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMST--NT 154 (808)
T ss_pred hhhh-hHHHHHHhccC-CCHHHHHHHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhhhhhccc--Cc
Confidence 9987 99999987664 999999999999999999999 99999999999999999999999999999998733 34
Q ss_pred cccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccccccc
Q 001544 926 MTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITE 1005 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1057)
...+...||+-|||||+..++.|+..+|.||+||++||+++|++||... ++...+..... .
T Consensus 155 ~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~-----------------si~~Lv~~I~~--d 215 (808)
T KOG0597|consen 155 SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR-----------------SITQLVKSILK--D 215 (808)
T ss_pred eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-----------------HHHHHHHHHhc--C
Confidence 5566778999999999999999999999999999999999999998541 11111111111 1
Q ss_pred chhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 1006 DKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
...+ +...+..+..++...+.+||.+|.+-.+++.|=
T Consensus 216 ~v~~--p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~Hp 252 (808)
T KOG0597|consen 216 PVKP--PSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHP 252 (808)
T ss_pred CCCC--cccccHHHHHHHHHHhhcChhhcccHHHHhcCh
Confidence 1111 125678899999999999999999999998874
No 27
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-40 Score=358.86 Aligned_cols=395 Identities=26% Similarity=0.264 Sum_probs=313.2
Q ss_pred CcEEEccCCCCcCCccccccCc--CCCcEEeeeccccccccCccccccccccEEEeecCccccccCccccccccccEEEe
Q 001544 243 LRILDLSFNDLWGDIPKEIGNL--TKLKELFLDFNILQGEIPHTVGNLHNLEYLSLVNNELVGTVPATIFNVSTLKLIEL 320 (1057)
Q Consensus 243 L~~L~Ls~N~l~~~~p~~l~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 320 (1057)
-..||++.+.+...-...+.+. +.-+.|++++|++....+..|.++++|+++++..|.++ .+|........|+.|+|
T Consensus 54 ~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L 132 (873)
T KOG4194|consen 54 TRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDL 132 (873)
T ss_pred ceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEee
Confidence 3467888888754322222222 34556889999988888888888899999999998887 77776666667888888
Q ss_pred cCCccccCCCCCcccCCCCCceEEecCccccccCCccccccccccccccccccccccccchhcccccccEEeccCcccCC
Q 001544 321 SNNTFFGSLPSSTDVQLPNLEELYLWGNNFSGTLPSFIFNASNLSKLSLGDNSFSGLIPNTFGNLRNLKRLRLYNNYLTS 400 (1057)
Q Consensus 321 s~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 400 (1057)
.+|.|+ ++.......++.|+.|||+.|.|+...-..|..-.++++|+|++|+|+.+..+.|..+.+|..|.|++|+|+.
T Consensus 133 ~~N~I~-sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNritt 211 (873)
T KOG4194|consen 133 RHNLIS-SVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITT 211 (873)
T ss_pred eccccc-cccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccc
Confidence 888886 5555555667888888888888885555556666778888888888888877888888888888888888888
Q ss_pred CccccccccCCCcchhhhhccCCCcccccccccccccccccEEEcCCCcccccccccccCccCCcEEEccCCcCCCCCCc
Q 001544 401 PELSFLSSLSNCKYLEIIALSGNPLNGIIPMSAGNLSHSLEELFMPDCNVSGRIPKEIGNLANLVTLDLGGNKFNGSIPI 480 (1057)
Q Consensus 401 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~ 480 (1057)
++... +.++++|+.|+|..|.+.- .---.|..+++|+.|.|..|.|.....+
T Consensus 212 Lp~r~---Fk~L~~L~~LdLnrN~iri-------------------------ve~ltFqgL~Sl~nlklqrN~I~kL~DG 263 (873)
T KOG4194|consen 212 LPQRS---FKRLPKLESLDLNRNRIRI-------------------------VEGLTFQGLPSLQNLKLQRNDISKLDDG 263 (873)
T ss_pred cCHHH---hhhcchhhhhhccccceee-------------------------ehhhhhcCchhhhhhhhhhcCcccccCc
Confidence 76543 3456667777777776641 1123577788888999999998877788
Q ss_pred ccccccccceeecccccCcccCCcccccccccceEEecCeeeeecCCccccCcccccccccCCccccccccccccccccc
Q 001544 481 ALGKLQKLQLLNLDDNKLEGSIPDDICGLVELYKLALGDNKLSGQIPACFGNLASLRELWLGPNELISFIPSTFWNIKDI 560 (1057)
Q Consensus 481 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 560 (1057)
.|..+.++++|+|+.|+++.+-.+++.+|+.|+.|+||+|.|..+-+++....++|++|+|+.|+|..+.++.|..+..|
T Consensus 264 ~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~L 343 (873)
T KOG4194|consen 264 AFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQL 343 (873)
T ss_pred ceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHh
Confidence 88889999999999999988888888899999999999999888888888888889999999999999988899999999
Q ss_pred cEEEeccccccCCCchhhccccccceeccccccccccccc---cccCccccceecccccccccccCccccccCccceecc
Q 001544 561 MYVNFSSNFLTGPLPLEIENLKALTTLDFSMNNLSGVIPT---TIGGLKGLQYLFLGHNRLQGSIPDSVGDLISLKSLNL 637 (1057)
Q Consensus 561 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 637 (1057)
+.|+|+.|.+..+-...|..+++|+.|||++|.|++.+.+ .|.+|++|+.|.|.+|+|..+...+|.++..|+.|||
T Consensus 344 e~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL 423 (873)
T KOG4194|consen 344 EELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDL 423 (873)
T ss_pred hhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecC
Confidence 9999999998887788888888999999999988876643 5778889999999999998666677888999999999
Q ss_pred cCccccCCCcccccCcccccccccCCCcccC
Q 001544 638 SNNNLSGPIPTSLEKLSDLKELNLSFNKLEG 668 (1057)
Q Consensus 638 s~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~ 668 (1057)
.+|.|....|+.|..+ .|+.|-+..-.+-+
T Consensus 424 ~~NaiaSIq~nAFe~m-~Lk~Lv~nSssflC 453 (873)
T KOG4194|consen 424 GDNAIASIQPNAFEPM-ELKELVMNSSSFLC 453 (873)
T ss_pred CCCcceeecccccccc-hhhhhhhcccceEE
Confidence 9999888888888888 88888776555544
No 28
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-39 Score=385.09 Aligned_cols=262 Identities=28% Similarity=0.488 Sum_probs=222.4
Q ss_pred CCCCCceeccccCeEEEEEEecC--Cc----EEEEEEeecc-chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQN--GI----EVAVKTFDLQ-HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKAL 842 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~~--~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 842 (1057)
..+..+.||+|.||.||.|...+ |. .||||.++.. +.+...+|.+|..+|+.++|||||+++|.|-+....++
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i 772 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLI 772 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEE
Confidence 34566889999999999998553 43 4899998654 45567899999999999999999999999999999999
Q ss_pred EEEEccCCChhHHHhcC------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccccc
Q 001544 843 ILEYMRNGSLEKCLYSG------NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIA 916 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 916 (1057)
++|||++|+|..++++. ...++....+.++.|||+|+.||+ ++++|||||.++|+|+++...+||+|||+|
T Consensus 773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~VKIaDFGlA 849 (1025)
T KOG1095|consen 773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE---SKHFVHRDLAARNCLLDERRVVKIADFGLA 849 (1025)
T ss_pred EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH---hCCCcCcchhhhheeecccCcEEEcccchh
Confidence 99999999999999987 567999999999999999999999 999999999999999999999999999999
Q ss_pred ccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHH
Q 001544 917 KLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMK 995 (1057)
Q Consensus 917 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1057)
+.+...+.+.......-...|||||.+.++.++.|+|||||||++||++| |..||......+ +..
T Consensus 850 rDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~--------------v~~ 915 (1025)
T KOG1095|consen 850 RDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE--------------VLL 915 (1025)
T ss_pred HhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH--------------HHH
Confidence 97766665555555455679999999999999999999999999999999 778876522111 111
Q ss_pred hhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHHHHhhh
Q 001544 996 IIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRDFLLRN 1054 (1057)
Q Consensus 996 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~~~ 1054 (1057)
....+.+.+.+..|+..++++|.+||+.+|++||++..+++.+..+.......
T Consensus 916 ------~~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~ 968 (1025)
T KOG1095|consen 916 ------DVLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALGT 968 (1025)
T ss_pred ------HHHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhccC
Confidence 11122356667789999999999999999999999999999998887766544
No 29
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=9.3e-39 Score=361.97 Aligned_cols=260 Identities=26% Similarity=0.419 Sum_probs=205.1
Q ss_pred hCCCCCCceeccccCeEEEEEEe------cCCcEEEEEEeeccc-hhHHHHHHHHHHHHHhc-CCCCceeEeeeeccC-C
Q 001544 768 TNGFSENNLIGRGSFGSVYIARL------QNGIEVAVKTFDLQH-ERAFKSFDTECEVMKSI-RHRNLTKIISSCSNE-D 838 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~ 838 (1057)
.++|++.++||+|+||.||+|.. .+++.||||+++... ....+.+.+|+++++++ +||||++++++|... +
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 45788999999999999999963 235789999986432 33456789999999999 899999999988654 4
Q ss_pred eeEEEEEEccCCChhHHHhcCC----------------------------------------------------------
Q 001544 839 FKALILEYMRNGSLEKCLYSGN---------------------------------------------------------- 860 (1057)
Q Consensus 839 ~~~lV~E~~~~gsL~~~l~~~~---------------------------------------------------------- 860 (1057)
..++||||+++|+|.+++....
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 6789999999999999886532
Q ss_pred ---ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccccccccccc
Q 001544 861 ---YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATLGY 937 (1057)
Q Consensus 861 ---~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y 937 (1057)
.++++.++..++.||++||+||| +++|+||||||+||+++.++.+||+|||+++...............++..|
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y 242 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW 242 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence 24778888999999999999999 999999999999999999999999999999865332222222333456789
Q ss_pred cCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHHHHHHH
Q 001544 938 MAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCA 1016 (1057)
Q Consensus 938 ~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1016 (1057)
+|||++.+..++.++|||||||++|||++ |..||......+. .. ....+.. ....+..++
T Consensus 243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~-~~-----------~~~~~~~-------~~~~~~~~~ 303 (338)
T cd05102 243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE-FC-----------QRLKDGT-------RMRAPENAT 303 (338)
T ss_pred cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH-HH-----------HHHhcCC-------CCCCCCCCC
Confidence 99999988899999999999999999997 9999865321110 00 0000000 011123456
Q ss_pred HHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHH
Q 001544 1017 SSVFNLAMECTVESPDERITAKEIVRRLLKIRD 1049 (1057)
Q Consensus 1017 ~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~ 1049 (1057)
+++.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 304 ~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 304 PEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 778999999999999999999999999998765
No 30
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-39 Score=356.39 Aligned_cols=250 Identities=25% Similarity=0.378 Sum_probs=207.3
Q ss_pred HhCCCCCCceeccccCeEEEEEEe-cCCcEEEEEEeecc----ch-hHHHHHHHHHHHHHhcC-CCCceeEeeeeccCCe
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQ----HE-RAFKSFDTECEVMKSIR-HRNLTKIISSCSNEDF 839 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 839 (1057)
....|...+.||+|+||+|+.|.. .+++.||||+++.. .. ...+.+.+|+.++++++ ||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 456889999999999999999964 47899999977543 11 23456778999999998 9999999999999999
Q ss_pred eEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC-CcEEEEccccccc
Q 001544 840 KALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN-MVAHLSDFGIAKL 918 (1057)
Q Consensus 840 ~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~Dfg~a~~ 918 (1057)
.|+||||+.||+|.+++.. ..++.+..+..+++|++.|++||| +++|+||||||+||+++.+ +.+||+|||++..
T Consensus 95 ~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~ 170 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCH---SRGIVHRDLKPENILLDGNEGNLKLSDFGLSAI 170 (370)
T ss_pred EEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEecCCCCCEEEeccccccc
Confidence 9999999999999999998 556888999999999999999999 9999999999999999999 9999999999987
Q ss_pred ccCCCCccccccccccccccCccccCCCC-C-CccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHh
Q 001544 919 LIGEDQSMTQTQTLATLGYMAPEYGREGR-V-STKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKI 996 (1057)
Q Consensus 919 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~-~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1057)
.. ..........||+.|+|||++.+.. | +.++||||+||++|-|++|+.||++..... +...
T Consensus 171 ~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~--------------l~~k 234 (370)
T KOG0583|consen 171 SP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPN--------------LYRK 234 (370)
T ss_pred cC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHH--------------HHHH
Confidence 63 2233445568999999999998866 6 489999999999999999999998721110 0111
Q ss_pred hhcccccccchhhHHHHHH-HHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 997 IDANLLITEDKHFAAKEQC-ASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 997 ~~~~~~~~~~~~~~~~~~~-~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
+.. ..+..+..+ ++++..++.+|+..+|.+|+++.|+++|
T Consensus 235 i~~-------~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h 275 (370)
T KOG0583|consen 235 IRK-------GEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEH 275 (370)
T ss_pred Hhc-------CCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhC
Confidence 111 112222334 7788999999999999999999999854
No 31
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.1e-39 Score=355.27 Aligned_cols=248 Identities=25% Similarity=0.371 Sum_probs=210.9
Q ss_pred CCCCCCceeccccCeEEEEEE-ecCCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIAR-LQNGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
.-|+..+.||.|+.|.|..|+ ..+|+.+|||++.+.. +.....+++|+-+|+-+.|||++++++.|++..+.|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 456778899999999999997 5689999999996542 234567899999999999999999999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
||+++|.|.+++-.++. +++.++.+++.||+.|+.|+| ..+|||||+||+|+|+|..+.+||+|||+|..-. .
T Consensus 92 Eyv~gGELFdylv~kG~-l~e~eaa~ff~QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~---~ 164 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKGP-LPEREAAHFFRQILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIADFGMASLEV---P 164 (786)
T ss_pred EecCCchhHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHh---hhcceeccCCchhhhhhcccCEeeeccceeeccc---C
Confidence 99999999999887664 889999999999999999999 9999999999999999999999999999998632 2
Q ss_pred ccccccccccccccCccccCCCCC-CccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccccc
Q 001544 925 SMTQTQTLATLGYMAPEYGREGRV-STKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLI 1003 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~~~~-~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1057)
.......+|.+.|.|||++.+..| +.++||||.|||+|.++||+.||++ ..+..... +
T Consensus 165 gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD-----dNir~LLl--------K-------- 223 (786)
T KOG0588|consen 165 GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD-----DNIRVLLL--------K-------- 223 (786)
T ss_pred CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC-----ccHHHHHH--------H--------
Confidence 334455689999999999999887 6899999999999999999999985 22221111 1
Q ss_pred ccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 1004 TEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1004 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
-....+..+..+++++.+|+.+|+..||++|.|++||++|-
T Consensus 224 V~~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 224 VQRGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred HHcCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCc
Confidence 11223444467788999999999999999999999999985
No 32
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.7e-39 Score=316.00 Aligned_cols=249 Identities=27% Similarity=0.361 Sum_probs=211.2
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALI 843 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 843 (1057)
.++|++.+.||+|.||.||.|+.+ ++-.||+|++.++. ....+++.+|+++-+.++||||.+++++|.+....|++
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 357899999999999999999854 68899999985442 34457899999999999999999999999999999999
Q ss_pred EEEccCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCC
Q 001544 844 LEYMRNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 922 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 922 (1057)
+||..+|++...+..++ ..+++.....+..|+|.|+.|+| .++|+||||||+|+|++.++.+|++|||.+..-
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~--- 174 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVHA--- 174 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceeec---
Confidence 99999999999998655 45899999999999999999999 999999999999999999999999999999753
Q ss_pred CCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccc
Q 001544 923 DQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLL 1002 (1057)
Q Consensus 923 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1057)
........+||.-|.|||...+..++..+|+|++|++.||++.|.+||+....+ ..+.. +...
T Consensus 175 -p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~-etYkr------------I~k~--- 237 (281)
T KOG0580|consen 175 -PSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS-ETYKR------------IRKV--- 237 (281)
T ss_pred -CCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH-HHHHH------------HHHc---
Confidence 133444568999999999999999999999999999999999999999863321 11111 1111
Q ss_pred cccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 1003 ITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
+...+..++.++.++|.+|+..+|.+|.+..|+++|-
T Consensus 238 -----~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hp 274 (281)
T KOG0580|consen 238 -----DLKFPSTISGGAADLISRLLVKNPIERLALTEVMDHP 274 (281)
T ss_pred -----cccCCcccChhHHHHHHHHhccCccccccHHHHhhhH
Confidence 1122245678899999999999999999999999874
No 33
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-39 Score=332.54 Aligned_cols=272 Identities=25% Similarity=0.281 Sum_probs=210.1
Q ss_pred HHhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEee--ccchhHHHHHHHHHHHHHhcCCCCceeEeeeecc-----C
Q 001544 766 QATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFD--LQHERAFKSFDTECEVMKSIRHRNLTKIISSCSN-----E 837 (1057)
Q Consensus 766 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~ 837 (1057)
.....|...+.||+|+||.|..|... +|+.||||++. .......++..+|+++++.++|+||+.+.+.+.. -
T Consensus 19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f 98 (359)
T KOG0660|consen 19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF 98 (359)
T ss_pred eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence 34556766799999999999999754 79999999986 4455667888999999999999999999998754 4
Q ss_pred CeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccc
Q 001544 838 DFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAK 917 (1057)
Q Consensus 838 ~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~ 917 (1057)
...|+|+|+|+ .+|.+.++.++ .++...+.-+++|+++||.|+| +.+|+|||+||+|++++.++.+||+|||+|+
T Consensus 99 ~DvYiV~elMe-tDL~~iik~~~-~L~d~H~q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI~DFGLAR 173 (359)
T KOG0660|consen 99 NDVYLVFELME-TDLHQIIKSQQ-DLTDDHAQYFLYQILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKICDFGLAR 173 (359)
T ss_pred ceeEEehhHHh-hHHHHHHHcCc-cccHHHHHHHHHHHHHhcchhh---cccccccccchhheeeccCCCEEecccccee
Confidence 57899999994 49999887765 4889999999999999999999 9999999999999999999999999999999
Q ss_pred cccCCCCccccccccccccccCcccc-CCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhh--hccchh--
Q 001544 918 LLIGEDQSMTQTQTLATLGYMAPEYG-REGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVN--DFLPIS-- 992 (1057)
Q Consensus 918 ~~~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~--~~~~~~-- 992 (1057)
...........+.++.|.+|+|||++ ....|+.+.||||.||++.||++|++-|.+...-. .+..... ...++.
T Consensus 174 ~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~-Ql~lI~~~lGtP~~e~l 252 (359)
T KOG0660|consen 174 YLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVH-QLQLILELLGTPSEEDL 252 (359)
T ss_pred eccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHH-HHHHHHHhcCCCCHHHH
Confidence 87544334556788899999999975 45679999999999999999999998775421110 0000000 001111
Q ss_pred -------HHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 993 -------MMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 993 -------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
....+.......+.......+.+.+...+++.+|+..||.+|+|++|+++|
T Consensus 253 ~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 253 QKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 111111111111111112223567889999999999999999999999987
No 34
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-39 Score=358.03 Aligned_cols=259 Identities=27% Similarity=0.420 Sum_probs=211.9
Q ss_pred hCCCCCCceeccccCeEEEEEEecC--C---cEEEEEEeecc---chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCe
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQN--G---IEVAVKTFDLQ---HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDF 839 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~~--~---~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 839 (1057)
.++....++||+|+||.||+|++.. + ..||||..+.. ......+|.+|+++|++++|||||+++|++..+..
T Consensus 156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~P 235 (474)
T KOG0194|consen 156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEP 235 (474)
T ss_pred ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc
Confidence 3445556899999999999997652 2 23899998753 35678899999999999999999999999999999
Q ss_pred eEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccc
Q 001544 840 KALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 919 (1057)
Q Consensus 840 ~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 919 (1057)
.|+|||+|.||+|++++.+.+..++..++..++.++|.||+||| +++++||||.++|+|++.++.+||+|||+++.-
T Consensus 236 l~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~ 312 (474)
T KOG0194|consen 236 LMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAARNCLYSKKGVVKISDFGLSRAG 312 (474)
T ss_pred cEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhHHHheecCCCeEEeCccccccCC
Confidence 99999999999999999998878999999999999999999999 999999999999999999999999999998753
Q ss_pred cCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhh
Q 001544 920 IGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIID 998 (1057)
Q Consensus 920 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1057)
. ..........-...|+|||.+..+.+++++|||||||++||+++ |..||...... ....++ .
T Consensus 313 ~--~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~--~v~~kI------------~ 376 (474)
T KOG0194|consen 313 S--QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY--EVKAKI------------V 376 (474)
T ss_pred c--ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH--HHHHHH------------H
Confidence 1 11111112234578999999999999999999999999999999 78887652211 111111 0
Q ss_pred cccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHHH
Q 001544 999 ANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRDF 1050 (1057)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 1050 (1057)
....+.+.+...+.++..++.+||..+|++||+|.++.+.++.+.+.
T Consensus 377 -----~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~ 423 (474)
T KOG0194|consen 377 -----KNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKK 423 (474)
T ss_pred -----hcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhc
Confidence 11112222335677889999999999999999999999999998765
No 35
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-39 Score=344.34 Aligned_cols=250 Identities=30% Similarity=0.435 Sum_probs=209.9
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
...|+..+.||+|+||.||+|.+. +++.||+|++.... .....++++|+.++.+++++||.++++.+..+...+++||
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe 91 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME 91 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence 345777799999999999999754 78999999997654 3456889999999999999999999999999999999999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
|+.||++.+.+..+. .+++..+..|++++..|+.|+| ..+.+|||||+.||++..+|.+|++|||.+..+.....
T Consensus 92 y~~gGsv~~lL~~~~-~~~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~- 166 (467)
T KOG0201|consen 92 YCGGGSVLDLLKSGN-ILDEFEIAVILREVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK- 166 (467)
T ss_pred HhcCcchhhhhccCC-CCccceeeeehHHHHHHhhhhh---hcceecccccccceeEeccCcEEEEecceeeeeechhh-
Confidence 999999999887665 3588888999999999999999 99999999999999999999999999999987743332
Q ss_pred cccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccccccc
Q 001544 926 MTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITE 1005 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1057)
.....+||+.|||||++....|+.|+||||+|++.+||++|.+|+.+..+...-+ .+ ..
T Consensus 167 -rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlf--------------lI------pk 225 (467)
T KOG0201|consen 167 -RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLF--------------LI------PK 225 (467)
T ss_pred -ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEE--------------ec------cC
Confidence 2256789999999999998899999999999999999999999987743311100 00 00
Q ss_pred chhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1006 DKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.........+++.+++++..|+..+|+.||+|.++++|
T Consensus 226 ~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 226 SAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred CCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 00111112567889999999999999999999999886
No 36
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1e-38 Score=324.09 Aligned_cols=267 Identities=24% Similarity=0.298 Sum_probs=205.6
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhH--HHHHHHHHHHHHhcCCCCceeEeeeecc--CCeeEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERA--FKSFDTECEVMKSIRHRNLTKIISSCSN--EDFKAL 842 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l 842 (1057)
.+.|+.++.|++|+||.||+|+++ +++.||+|+++...+.. --...+||.++.+.+|||||.+-+.... -+..|+
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 345778899999999999999865 68999999997654321 2345789999999999999999887754 467999
Q ss_pred EEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCC
Q 001544 843 ILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 922 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 922 (1057)
|||||+. +|...+..-+.++...++..++.|+++|++||| ...|+|||+|++|+|+...|.+||+|||+|+.+.
T Consensus 155 VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg-- 228 (419)
T KOG0663|consen 155 VMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGLAREYG-- 228 (419)
T ss_pred eHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEecccchhhhhc--
Confidence 9999988 999999888888999999999999999999999 9999999999999999999999999999999873
Q ss_pred CCccccccccccccccCccccCCC-CCCccchHHHHHHHHHHHhhCCCCCCcccccccchh-------------hhhhhc
Q 001544 923 DQSMTQTQTLATLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLK-------------HWVNDF 988 (1057)
Q Consensus 923 ~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~-------------~~~~~~ 988 (1057)
......+..+.|.+|+|||.+.+. .|+.+.|+||+|||+.||+++++-|.+.. +.+.. .|-...
T Consensus 229 sp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~s--E~dQl~~If~llGtPte~iwpg~~ 306 (419)
T KOG0663|consen 229 SPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKS--EIDQLDKIFKLLGTPSEAIWPGYS 306 (419)
T ss_pred CCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCc--hHHHHHHHHHHhCCCccccCCCcc
Confidence 334567778899999999987765 58999999999999999999998776521 11111 111110
Q ss_pred cchhHHHh-hhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 989 LPISMMKI-IDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 989 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
....+... +.......-...+... ..+..-++++..++.+||.+|.||.|.++|
T Consensus 307 ~lp~~k~~~f~~~pyn~lr~kF~~~-~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 307 ELPAVKKMTFSEHPYNNLRKKFGAL-SLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred ccchhhccccCCCCchhhhhhcccc-ccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 00000000 0000000011111111 145778899999999999999999999876
No 37
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=6.2e-38 Score=344.88 Aligned_cols=247 Identities=23% Similarity=0.316 Sum_probs=200.8
Q ss_pred CceeccccCeEEEEEEecCCcEEEEEEeeccch---hHHHHHHHHHHHHHhcCCCCceeEeeeecc----CCeeEEEEEE
Q 001544 774 NNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHE---RAFKSFDTECEVMKSIRHRNLTKIISSCSN----EDFKALILEY 846 (1057)
Q Consensus 774 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lV~E~ 846 (1057)
...||+|++|.||+|.. +|+.||||+++.... ...+.+.+|++++++++||||++++|++.+ ....++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 36899999999999998 489999999965432 235778899999999999999999999866 3467899999
Q ss_pred ccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCC-CCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 847 MRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYS-APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
+++|+|.+++...+ .+++.++.+++.|++.|++||| + .+++||||||+||++++++.+||+|||+++.+...
T Consensus 104 ~~~g~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lH---~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~--- 176 (283)
T PHA02988 104 CTRGYLREVLDKEK-DLSFKTKLDMAIDCCKGLYNLY---KYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP--- 176 (283)
T ss_pred CCCCcHHHHHhhCC-CCChhHHHHHHHHHHHHHHHHH---hcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccc---
Confidence 99999999997654 5889999999999999999999 6 48889999999999999999999999999865321
Q ss_pred cccccccccccccCccccCC--CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccccc
Q 001544 926 MTQTQTLATLGYMAPEYGRE--GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLI 1003 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~--~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1057)
.....++..|+|||++.+ ..++.++|||||||++|||++|+.||...... ++.. .+...
T Consensus 177 --~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~-----~~~~--------~i~~~---- 237 (283)
T PHA02988 177 --PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK-----EIYD--------LIINK---- 237 (283)
T ss_pred --cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH-----HHHH--------HHHhc----
Confidence 123457889999999876 67899999999999999999999999753211 1000 01000
Q ss_pred ccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHH
Q 001544 1004 TEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRD 1049 (1057)
Q Consensus 1004 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~ 1049 (1057)
..+...+..+++++.+++.+||+.||++|||+.|+++.|+.++.
T Consensus 238 --~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 238 --NNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred --CCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 00111122467789999999999999999999999999998764
No 38
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-37 Score=330.92 Aligned_cols=275 Identities=25% Similarity=0.306 Sum_probs=204.9
Q ss_pred CCCCCceeccccCeEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHHHh--cCCCCceeEeeeeccCC----eeEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERAFKSFDTECEVMKS--IRHRNLTKIISSCSNED----FKALI 843 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~lV 843 (1057)
..+..++||+|.||.||||.++ ++.||||++... ..+.|++|-++++- ++|+||++++++-.... .+.+|
T Consensus 211 pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred chhhHHHhhcCccceeehhhcc-CceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence 4455688999999999999988 599999999643 34667777777764 58999999999876555 78999
Q ss_pred EEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhC------CCCCeEEccCCCCCeeeCCCCcEEEEcccccc
Q 001544 844 LEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFG------YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAK 917 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~------~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~ 917 (1057)
+||.+.|+|.+++... .++|....+|+..+++||+|||++ .+++|+|||||++|||+..|+++.|+|||+|.
T Consensus 287 t~fh~kGsL~dyL~~n--tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl 364 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLKAN--TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLAL 364 (534)
T ss_pred eeeccCCcHHHHHHhc--cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeE
Confidence 9999999999999865 499999999999999999999953 35789999999999999999999999999999
Q ss_pred cccCCCCccccccccccccccCccccCCCCC------CccchHHHHHHHHHHHhhCCCCCCcccccc--cchhhhhhhcc
Q 001544 918 LLIGEDQSMTQTQTLATLGYMAPEYGREGRV------STKGDVYSFGILLMETFTRRKPTDEIFSGE--MTLKHWVNDFL 989 (1057)
Q Consensus 918 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~------~~~~Dv~s~G~il~elltg~~p~~~~~~~~--~~~~~~~~~~~ 989 (1057)
++.+..........+||.+|||||++.+..- -.+.||||+|.|+|||+++..-+.....++ ..++.=+....
T Consensus 365 ~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hP 444 (534)
T KOG3653|consen 365 RLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHP 444 (534)
T ss_pred EecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCC
Confidence 9876665555566899999999999876432 236899999999999999865442111111 11111111111
Q ss_pred c-hhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHHH
Q 001544 990 P-ISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRDF 1050 (1057)
Q Consensus 990 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 1050 (1057)
. +++.+.+-.......-...-....-...+.+.+..||..||+.|.|+.=|-+.+.++...
T Consensus 445 t~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~ 506 (534)
T KOG3653|consen 445 TLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMML 506 (534)
T ss_pred CHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhcc
Confidence 1 112222221111111111111123456789999999999999999999999999888654
No 39
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.9e-38 Score=341.83 Aligned_cols=255 Identities=24% Similarity=0.362 Sum_probs=205.6
Q ss_pred HhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEE
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKAL 842 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 842 (1057)
..++|+.+.+||+|+||.||.|+.+ +|..+|+|++++.. ..+.+.+..|-.+|....+|.||+++-.|.+.+..||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 4578999999999999999999754 69999999997653 3456778889999999999999999999999999999
Q ss_pred EEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCC
Q 001544 843 ILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 922 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 922 (1057)
||||++||++..+|...+ .+++..+..++.+.+-|++.+| +.|+|||||||+|+|||..|++|++|||++.-+...
T Consensus 219 iMEylPGGD~mTLL~~~~-~L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKD-TLTEDWARFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EEEecCCccHHHHHHhcC-cCchHHHHHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCEeeccccccchhhhh
Confidence 999999999999998766 5899999999999999999999 999999999999999999999999999998533110
Q ss_pred ----------------------CCc----cccc-------------------cccccccccCccccCCCCCCccchHHHH
Q 001544 923 ----------------------DQS----MTQT-------------------QTLATLGYMAPEYGREGRVSTKGDVYSF 957 (1057)
Q Consensus 923 ----------------------~~~----~~~~-------------------~~~~t~~y~aPE~~~~~~~~~~~Dv~s~ 957 (1057)
+.. ...+ ..+|||-|||||++.+..|+..+|.||+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 000 0000 2369999999999999999999999999
Q ss_pred HHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCC-
Q 001544 958 GILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERIT- 1036 (1057)
Q Consensus 958 G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps- 1036 (1057)
|||+|||+.|.+||...... +.|. +++.-. ..-.++....++.+..++|.+|+. ||++|..
T Consensus 375 G~ImyEmLvGyPPF~s~tp~----~T~r---------kI~nwr----~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~ 436 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQ----ETYR---------KIVNWR----ETLKFPEEVDLSDEAKDLITRLLC-DPENRLGS 436 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHH----HHHH---------HHHHHh----hhccCCCcCcccHHHHHHHHHHhc-CHHHhcCc
Confidence 99999999999998762221 1111 111111 011222234556889999999999 9999985
Q ss_pred --HHHHHHH
Q 001544 1037 --AKEIVRR 1043 (1057)
Q Consensus 1037 --~~evl~~ 1043 (1057)
+.||.+|
T Consensus 437 ~G~~EIK~H 445 (550)
T KOG0605|consen 437 KGAEEIKKH 445 (550)
T ss_pred ccHHHHhcC
Confidence 6666554
No 40
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=3.5e-42 Score=356.30 Aligned_cols=481 Identities=28% Similarity=0.371 Sum_probs=345.9
Q ss_pred ceeEEeeecccCcccccccccCCCCCcEEeCCCCCccccCCcccccccccceeecccccccCCCCccccccCCCCeEecc
Q 001544 72 RVTALNISYLSLTGNIPRQLGNLSSLEILDLNFNRLSGEIPWELGNLAKLEKLLLHNNFLTGTIPFSIFKLSSLLDLKLS 151 (1057)
Q Consensus 72 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 151 (1057)
-.+.+++.++.++ ++|++++.+..++.|+.++|+++ ++|+.++++.+|.+|+.++|.+. .+|++++.+..|..|+..
T Consensus 69 ~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~ 145 (565)
T KOG0472|consen 69 CLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDAT 145 (565)
T ss_pred ceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhcc
Confidence 3788899999998 89999999999999999999998 99999999999999999999999 899999999999999999
Q ss_pred CCCCCCCCCcccccCCCCCceeEccCCcccccCchhhhccccCCeeEeeccCCccccCccccCCCCcccEEEeecccccc
Q 001544 152 DNNLTGTIPSHNLGNLSSLQLLDLSDNQLSGSIPSFIFKISSLQALHFGNNRLSGELPANICDNLPFLNFFSVYKNMFYG 231 (1057)
Q Consensus 152 ~n~l~~~~p~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~l~~n~~~~ 231 (1057)
+|+++ ..|. .+.++.+|..|++.+|++....|. .-.++.|++||...|-++ .+|..
T Consensus 146 ~N~i~-slp~-~~~~~~~l~~l~~~~n~l~~l~~~-~i~m~~L~~ld~~~N~L~-tlP~~-------------------- 201 (565)
T KOG0472|consen 146 NNQIS-SLPE-DMVNLSKLSKLDLEGNKLKALPEN-HIAMKRLKHLDCNSNLLE-TLPPE-------------------- 201 (565)
T ss_pred ccccc-cCch-HHHHHHHHHHhhccccchhhCCHH-HHHHHHHHhcccchhhhh-cCChh--------------------
Confidence 99998 6665 489999999999999999955444 445999999999999886 56654
Q ss_pred CccccccCCCCCcEEEccCCCCcCCccccccCcCCCcEEeeeccccccccCcc-ccccccccEEEeecCccccccCcccc
Q 001544 232 GISSTLSNCKHLRILDLSFNDLWGDIPKEIGNLTKLKELFLDFNILQGEIPHT-VGNLHNLEYLSLVNNELVGTVPATIF 310 (1057)
Q Consensus 232 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~~~~~~ 310 (1057)
++.+.+|..|+|..|+|. .+| +|+++..|.+|++..|+|. .+|.. ..++++|..|||..|+++ ..|..+.
T Consensus 202 -----lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~c 272 (565)
T KOG0472|consen 202 -----LGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEIC 272 (565)
T ss_pred -----hcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHH
Confidence 578899999999999996 566 8999999999999999999 56655 458999999999999998 7888888
Q ss_pred ccccccEEEecCCccccCCCCCcccCCCCCceEEecCccccccCCccccccc---cccccccccccccccccchhccccc
Q 001544 311 NVSTLKLIELSNNTFFGSLPSSTDVQLPNLEELYLWGNNFSGTLPSFIFNAS---NLSKLSLGDNSFSGLIPNTFGNLRN 387 (1057)
Q Consensus 311 ~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~---~L~~L~L~~N~l~~~~~~~~~~l~~ 387 (1057)
-+.+|+.||+|+|.++ .+|.... ++ .|+.|-+.+|.+.. +-..+-+.. -|++|.= .+...
T Consensus 273 lLrsL~rLDlSNN~is-~Lp~sLg-nl-hL~~L~leGNPlrT-iRr~ii~~gT~~vLKyLrs---~~~~d---------- 335 (565)
T KOG0472|consen 273 LLRSLERLDLSNNDIS-SLPYSLG-NL-HLKFLALEGNPLRT-IRREIISKGTQEVLKYLRS---KIKDD---------- 335 (565)
T ss_pred HhhhhhhhcccCCccc-cCCcccc-cc-eeeehhhcCCchHH-HHHHHHcccHHHHHHHHHH---hhccC----------
Confidence 8888888888888776 3443332 33 45555555555542 111111110 0111110 00000
Q ss_pred ccEEeccCc---ccCCC--ccccccccCCCcchhhhhccCCCcccccccccccccccccEEEcCCCcccccccccccCcc
Q 001544 388 LKRLRLYNN---YLTSP--ELSFLSSLSNCKYLEIIALSGNPLNGIIPMSAGNLSHSLEELFMPDCNVSGRIPKEIGNLA 462 (1057)
Q Consensus 388 L~~L~L~~N---~l~~~--~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~l~~n~~~~~~p~~~~~l~ 462 (1057)
.++.- .-++. +...++...... +.+.|++++-+++ .+|+....-.
T Consensus 336 ----glS~se~~~e~~~t~~~~~~~~~~~~i-------------------------~tkiL~~s~~qlt-~VPdEVfea~ 385 (565)
T KOG0472|consen 336 ----GLSQSEGGTETAMTLPSESFPDIYAII-------------------------TTKILDVSDKQLT-LVPDEVFEAA 385 (565)
T ss_pred ----CCCCCcccccccCCCCCCcccchhhhh-------------------------hhhhhcccccccc-cCCHHHHHHh
Confidence 00000 00000 000111112222 3444455554444 2344333332
Q ss_pred ---CCcEEEccCCcCCCCCCcccccccccceeecccccCcccCCcccccccccceEEecCeeeeecCCccccCccccccc
Q 001544 463 ---NLVTLDLGGNKFNGSIPIALGKLQKLQLLNLDDNKLEGSIPDDICGLVELYKLALGDNKLSGQIPACFGNLASLREL 539 (1057)
Q Consensus 463 ---~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 539 (1057)
-.+..+++.|++. .+|..+..+..+++.-+..|+..+.+|..++.+++|..|+|++|-+. .+|..++.+..|+.|
T Consensus 386 ~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~L 463 (565)
T KOG0472|consen 386 KSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTL 463 (565)
T ss_pred hhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhhee
Confidence 2778888888888 68888877777666544444444478888888888888888888776 567777776666665
Q ss_pred ccCCccccccccccccccccccEEEeccccccCCCchhhccccccceeccccccccccccccccCccccceecccccccc
Q 001544 540 WLGPNELISFIPSTFWNIKDIMYVNFSSNFLTGPLPLEIENLKALTTLDFSMNNLSGVIPTTIGGLKGLQYLFLGHNRLQ 619 (1057)
Q Consensus 540 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 619 (1057)
+++.|+ +. ..|..+..+..++.+-.++|++..+.|..+.+|.+|..|||.+|.+.
T Consensus 464 nlS~Nr------------------------Fr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq 518 (565)
T KOG0472|consen 464 NLSFNR------------------------FR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ 518 (565)
T ss_pred cccccc------------------------cc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh
Confidence 555554 43 35666666677777777888888776777889999999999999998
Q ss_pred cccCccccccCccceecccCccccCCCcccccCcccccccccCCC
Q 001544 620 GSIPDSVGDLISLKSLNLSNNNLSGPIPTSLEKLSDLKELNLSFN 664 (1057)
Q Consensus 620 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N 664 (1057)
.+|..+++|++|++|+|++|.|+ ..+...-.-+....|..-++
T Consensus 519 -~IPp~LgnmtnL~hLeL~gNpfr-~Pr~~iLmkgT~aiL~ylrd 561 (565)
T KOG0472|consen 519 -QIPPILGNMTNLRHLELDGNPFR-QPRHQILMKGTAAILSYLRD 561 (565)
T ss_pred -hCChhhccccceeEEEecCCccC-CCHHHHhccChHHHHHHhcc
Confidence 78888999999999999999998 44444433333444443333
No 41
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-40 Score=317.46 Aligned_cols=253 Identities=22% Similarity=0.351 Sum_probs=207.2
Q ss_pred hCCCCCCceeccccCeEEEEEE-ecCCcEEEEEEeecc--chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIAR-LQNGIEVAVKTFDLQ--HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
.+.|++.++||+|.|+.||++. ..+|+.+|+|++... .....+.+++|+++-+.++||||+++.+.+.+....|+|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 3467778899999999999985 557999999988533 2346788999999999999999999999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC---CCCcEEEEcccccccccC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLIG 921 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~---~~~~~kl~Dfg~a~~~~~ 921 (1057)
|+|+|++|..-+-.. ..+++..+-..++||+++++|+| .++|||||+||+|+++- ...-+|++|||+|..+.
T Consensus 90 e~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~- 164 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCH---SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN- 164 (355)
T ss_pred ecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeeeeccCCCceeecccceEEEeC-
Confidence 999999996544332 45788888899999999999999 99999999999999995 34579999999999874
Q ss_pred CCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccc
Q 001544 922 EDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANL 1001 (1057)
Q Consensus 922 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1057)
........+||++|||||+.+..+++..+|||+.||++|-++.|++||.+.... .+++...
T Consensus 165 --~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~-----------------rlye~I~ 225 (355)
T KOG0033|consen 165 --DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-----------------RLYEQIK 225 (355)
T ss_pred --CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH-----------------HHHHHHh
Confidence 344566778999999999999999999999999999999999999998762211 1111111
Q ss_pred ccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 1002 LITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1002 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
........+.+..++++.++++++|+..||.+|.|+.|+++|=
T Consensus 226 ~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~Hp 268 (355)
T KOG0033|consen 226 AGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHP 268 (355)
T ss_pred ccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCc
Confidence 1111122233456778899999999999999999999998764
No 42
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-38 Score=313.42 Aligned_cols=236 Identities=27% Similarity=0.367 Sum_probs=201.1
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
++|+..+.+|.|+||.|..++.+ +|..+|+|++++.. -++.+...+|..+++++.||+++++++.|.+.+..|+||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 46888899999999999999855 68999999997653 345567788999999999999999999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
||++||.|..++++.+. +++..++-+|.||+.|++||| +.+|++||+||+|||+|++|.+||+|||+|+++.+.
T Consensus 124 eyv~GGElFS~Lrk~~r-F~e~~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r-- 197 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSGR-FSEPHARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR-- 197 (355)
T ss_pred eccCCccHHHHHHhcCC-CCchhHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEeccceEEecCc--
Confidence 99999999999988664 999999999999999999999 999999999999999999999999999999987321
Q ss_pred ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhH-HHhhhccccc
Q 001544 925 SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISM-MKIIDANLLI 1003 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 1003 (1057)
.-..+||+.|+|||++....+..++|-|||||++|||+.|.+||..... ..+ .++....
T Consensus 198 ---T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~--------------~~iY~KI~~~~--- 257 (355)
T KOG0616|consen 198 ---TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP--------------IQIYEKILEGK--- 257 (355)
T ss_pred ---EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh--------------HHHHHHHHhCc---
Confidence 3345799999999999999999999999999999999999999976211 011 1122111
Q ss_pred ccchhhHHHHHHHHHHHHHHhHcccCCCCCCC
Q 001544 1004 TEDKHFAAKEQCASSVFNLAMECTVESPDERI 1035 (1057)
Q Consensus 1004 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 1035 (1057)
...+...+.++.+++...++.|-.+|.
T Consensus 258 -----v~fP~~fs~~~kdLl~~LL~vD~t~R~ 284 (355)
T KOG0616|consen 258 -----VKFPSYFSSDAKDLLKKLLQVDLTKRF 284 (355)
T ss_pred -----ccCCcccCHHHHHHHHHHHhhhhHhhh
Confidence 122345677899999999999999983
No 43
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.3e-37 Score=347.11 Aligned_cols=262 Identities=24% Similarity=0.415 Sum_probs=202.7
Q ss_pred CCCCCCceeccccCeEEEEEEecC-----------------CcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQN-----------------GIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKI 830 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l 830 (1057)
.+|++.++||+|+||.||+|.+++ +..||||++.... .....++.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 468888999999999999997532 3479999987543 3345679999999999999999999
Q ss_pred eeeeccCCeeEEEEEEccCCChhHHHhcCC------------------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Q 001544 831 ISSCSNEDFKALILEYMRNGSLEKCLYSGN------------------YILDIFQRLNIMIDVASALEYLHFGYSAPVIH 892 (1057)
Q Consensus 831 ~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH 892 (1057)
++++.+.+..++||||+++|+|.+++.... ..+++.++.+++.||+.||+||| +.+|+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS---SLNFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH---HCCccc
Confidence 999999999999999999999999885432 24678889999999999999999 899999
Q ss_pred ccCCCCCeeeCCCCcEEEEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh--CCCC
Q 001544 893 CDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT--RRKP 970 (1057)
Q Consensus 893 ~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt--g~~p 970 (1057)
|||||+||++++++.+||+|||+++.+.............++..|+|||++..+.++.++||||||+++|||++ +..|
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 99999999999999999999999986543332222233445778999999988889999999999999999987 4566
Q ss_pred CCcccccccchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHH
Q 001544 971 TDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLK 1046 (1057)
Q Consensus 971 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1046 (1057)
|......+ ..... .+....... ......+..++..+.+++.+||+.||++|||+.|+.+.|++
T Consensus 242 ~~~~~~~~--~~~~~--------~~~~~~~~~---~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 242 YGELTDEQ--VIENA--------GEFFRDQGR---QVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCcCCHHH--HHHHH--------HHHhhhccc---cccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 65421111 00000 000000000 00001112456789999999999999999999999988763
No 44
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-38 Score=332.35 Aligned_cols=257 Identities=26% Similarity=0.394 Sum_probs=203.4
Q ss_pred HHhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccch---------h-----HHHHHHHHHHHHHhcCCCCceeE
Q 001544 766 QATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHE---------R-----AFKSFDTECEVMKSIRHRNLTKI 830 (1057)
Q Consensus 766 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---------~-----~~~~~~~E~~~l~~l~h~niv~l 830 (1057)
+.-++|++.+.||+|.||.|-+|+.. +++.||||++.+... . ..+...+||.+|++++|||||++
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 45678999999999999999999854 799999999954321 1 13578899999999999999999
Q ss_pred eeeecc--CCeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcE
Q 001544 831 ISSCSN--EDFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVA 908 (1057)
Q Consensus 831 ~~~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 908 (1057)
+++..+ .+..|+|+|||..|.+...= .....++..++++++.++..||+||| ..+||||||||+|+|++++|++
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p-~d~~els~~~Ar~ylrDvv~GLEYLH---~QgiiHRDIKPsNLLl~~~g~V 249 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCP-PDKPELSEQQARKYLRDVVLGLEYLH---YQGIIHRDIKPSNLLLSSDGTV 249 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCC-CCcccccHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEEcCCCcE
Confidence 999866 57899999999999886532 11223899999999999999999999 9999999999999999999999
Q ss_pred EEEcccccccccCC---CCccccccccccccccCccccCCCC----CCccchHHHHHHHHHHHhhCCCCCCcccccccch
Q 001544 909 HLSDFGIAKLLIGE---DQSMTQTQTLATLGYMAPEYGREGR----VSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTL 981 (1057)
Q Consensus 909 kl~Dfg~a~~~~~~---~~~~~~~~~~~t~~y~aPE~~~~~~----~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~ 981 (1057)
||+|||.+...... +........+||+.|+|||...++. .+.+.||||+||++|.|+.|+.||-+.+. +
T Consensus 250 KIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~----~ 325 (576)
T KOG0585|consen 250 KISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE----L 325 (576)
T ss_pred EeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH----H
Confidence 99999998765211 1222334478999999999877633 46788999999999999999999865211 0
Q ss_pred hhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHH
Q 001544 982 KHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLL 1045 (1057)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1045 (1057)
+ -..+++... ..++..++..+++.+++.+|+.+||++|.+..+|..|..
T Consensus 326 ~---------l~~KIvn~p------L~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpw 374 (576)
T KOG0585|consen 326 E---------LFDKIVNDP------LEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPW 374 (576)
T ss_pred H---------HHHHHhcCc------ccCCCcccccHHHHHHHHHHhhcChhheeehhhheecce
Confidence 0 011222111 123333456788999999999999999999999988764
No 45
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-38 Score=308.04 Aligned_cols=263 Identities=22% Similarity=0.310 Sum_probs=211.2
Q ss_pred HhCCCCCCceeccccCeEEEEEE-ecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccC-----Cee
Q 001544 767 ATNGFSENNLIGRGSFGSVYIAR-LQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNE-----DFK 840 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 840 (1057)
..++|++.+.+|+|||+.||.++ ..++..||+|++.....+..+...+|++..++++|||+++++++...+ ...
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 34689999999999999999997 667899999999777667778899999999999999999999987443 358
Q ss_pred EEEEEEccCCChhHHHhc---CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccc
Q 001544 841 ALILEYMRNGSLEKCLYS---GNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAK 917 (1057)
Q Consensus 841 ~lV~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~ 917 (1057)
|++++|...|+|.+.+.. ++..+++.++++|+.+|++||++||. ...+++||||||.||++.+++.+++.|||.++
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~-~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHE-KEPPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhc-cCCcccccCCCcceeEecCCCceEEEeccCcc
Confidence 999999999999998764 33579999999999999999999992 13349999999999999999999999999997
Q ss_pred cccCCCCc-------cccccccccccccCccccC---CCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhh
Q 001544 918 LLIGEDQS-------MTQTQTLATLGYMAPEYGR---EGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVND 987 (1057)
Q Consensus 918 ~~~~~~~~-------~~~~~~~~t~~y~aPE~~~---~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~ 987 (1057)
...-.-.. ........|..|+|||.+. +...++++||||+||++|+|+.|..||+...+...++.--+.
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~- 256 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQ- 256 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeee-
Confidence 65321111 1122345788999999874 455789999999999999999999999876554333321110
Q ss_pred ccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHh
Q 001544 988 FLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKI 1047 (1057)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 1047 (1057)
.....++....+++.+.+++++|+++||.+||++.|++.++..+
T Consensus 257 ----------------n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 257 ----------------NAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred ----------------ccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 01111222223678899999999999999999999999998765
No 46
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.5e-37 Score=355.47 Aligned_cols=258 Identities=26% Similarity=0.388 Sum_probs=204.2
Q ss_pred hCCCCCCceeccccCeEEEEEEe------cCCcEEEEEEeeccc-hhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCCe
Q 001544 768 TNGFSENNLIGRGSFGSVYIARL------QNGIEVAVKTFDLQH-ERAFKSFDTECEVMKSI-RHRNLTKIISSCSNEDF 839 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 839 (1057)
.++|++.+.||+|+||.||+|+. +++..||||+++... ....+.+.+|+++++++ +||||++++++|.+.+.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 34688899999999999999963 246689999986443 33456788999999999 89999999999999999
Q ss_pred eEEEEEEccCCChhHHHhcCC-----------------------------------------------------------
Q 001544 840 KALILEYMRNGSLEKCLYSGN----------------------------------------------------------- 860 (1057)
Q Consensus 840 ~~lV~E~~~~gsL~~~l~~~~----------------------------------------------------------- 860 (1057)
.++||||+++|+|.+++....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 999999999999999886432
Q ss_pred ---------------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 861 ---------------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 861 ---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
..+++..+.+++.||++||+||| +++|+||||||+||+++.++.+||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 24788899999999999999999 999999999999999999999999999999865332222
Q ss_pred cccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccccc
Q 001544 926 MTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLIT 1004 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1057)
.......++..|+|||++.+..++.++|||||||++|||++ |..||....... .. .+.+....
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-~~------------~~~~~~~~--- 334 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-KF------------YKMIKEGY--- 334 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-HH------------HHHHHhCc---
Confidence 22222334667999999999999999999999999999998 888876532111 11 11111110
Q ss_pred cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHh
Q 001544 1005 EDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKI 1047 (1057)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 1047 (1057)
+...+...+.++.+++.+||+.||++||++.|+++.|++.
T Consensus 335 ---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 335 ---RMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred ---cCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 0001122456789999999999999999999999999863
No 47
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-38 Score=341.00 Aligned_cols=263 Identities=24% Similarity=0.432 Sum_probs=219.9
Q ss_pred CCCCCCceeccccCeEEEEEEecCCcEEEEEEeeccchh-HHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHER-AFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
....+.++||+|.||.|..+....+..||||.++..... ...+|.+|+++|.+++||||++++|.|..++..++|+|||
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm 617 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM 617 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence 356678999999999999999988899999999876544 4589999999999999999999999999999999999999
Q ss_pred cCCChhHHHhcCCcc-CCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 848 RNGSLEKCLYSGNYI-LDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 848 ~~gsL~~~l~~~~~~-l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
++|+|.+++.....+ .......+|+.|||.|++||. +..+||||+.++|+|++.++++||+|||+++-+...+.+.
T Consensus 618 EnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~ 694 (807)
T KOG1094|consen 618 ENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYR 694 (807)
T ss_pred hcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHH---hhchhhccccccceeecCcccEEecCcccccccccCCcee
Confidence 999999999877543 366777889999999999999 9999999999999999999999999999999877777777
Q ss_pred ccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh--CCCCCCcccccccchhhhhhhccchhHHHhhhcccccc
Q 001544 927 TQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT--RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLIT 1004 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1057)
.....+-..+|||||.+..++++.++|||+||+++||+++ ...||.+..++.. . +...++.+.. .
T Consensus 695 vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v-v---------en~~~~~~~~---~ 761 (807)
T KOG1094|consen 695 VQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV-V---------ENAGEFFRDQ---G 761 (807)
T ss_pred eecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH-H---------HhhhhhcCCC---C
Confidence 7777777889999999999999999999999999999876 5678766332211 0 0011111110 0
Q ss_pred cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHh
Q 001544 1005 EDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKI 1047 (1057)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 1047 (1057)
.......+..|+.+++++|.+||.+|-++||+++++..+|++.
T Consensus 762 ~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 762 RQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred cceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 1112233457899999999999999999999999999998764
No 48
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2.1e-37 Score=338.21 Aligned_cols=255 Identities=22% Similarity=0.359 Sum_probs=206.1
Q ss_pred CCCCCCceeccccCeEEEEEEec----CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ----NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALI 843 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 843 (1057)
++|++.+.||+|+||.||+|.+. .+..||+|+++... ......+.+|++++++++||||+++++++..++..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 46888899999999999999753 36789999987553 33446789999999999999999999999999999999
Q ss_pred EEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC
Q 001544 844 LEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 923 (1057)
|||+++|+|.+++......+++.+++.++.|++.|++||| +.+++||||||+||+++.++.+|++|||.+.......
T Consensus 85 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~ 161 (266)
T cd05064 85 TEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA 161 (266)
T ss_pred EEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCcccccccccc
Confidence 9999999999999876667899999999999999999999 9999999999999999999999999999876532111
Q ss_pred CccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccc
Q 001544 924 QSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLL 1002 (1057)
Q Consensus 924 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1057)
........++..|+|||...+..++.++|||||||++||+++ |+.||...... ...+.+...
T Consensus 162 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--------------~~~~~~~~~-- 224 (266)
T cd05064 162 -IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--------------DVIKAVEDG-- 224 (266)
T ss_pred -hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--------------HHHHHHHCC--
Confidence 111112234578999999988999999999999999999775 99998652111 011111110
Q ss_pred cccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHh
Q 001544 1003 ITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKI 1047 (1057)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 1047 (1057)
...+.+..++..+.+++.+||+.+|++||++.|+.+.|+++
T Consensus 225 ----~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 225 ----FRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred ----CCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 01112245677899999999999999999999999988764
No 49
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.4e-37 Score=355.49 Aligned_cols=259 Identities=25% Similarity=0.422 Sum_probs=205.1
Q ss_pred hCCCCCCceeccccCeEEEEEEec------CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCCe
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ------NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSI-RHRNLTKIISSCSNEDF 839 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 839 (1057)
.++|++.+.||+|+||.||+|... ++..||||+++... ......+.+|+++++++ +||||++++++|.+.+.
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 346888999999999999998742 34579999996543 33456788999999999 89999999999999999
Q ss_pred eEEEEEEccCCChhHHHhcCC-----------------------------------------------------------
Q 001544 840 KALILEYMRNGSLEKCLYSGN----------------------------------------------------------- 860 (1057)
Q Consensus 840 ~~lV~E~~~~gsL~~~l~~~~----------------------------------------------------------- 860 (1057)
.++||||+++|+|.++++...
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 999999999999999885421
Q ss_pred ----------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcccccc
Q 001544 861 ----------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ 930 (1057)
Q Consensus 861 ----------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 930 (1057)
..+++.++.+++.||++||+||| +++|+||||||+||++++++.+||+|||+++.+...........
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~ 273 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN 273 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence 24788889999999999999999 99999999999999999999999999999986533222112222
Q ss_pred ccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhh
Q 001544 931 TLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHF 1009 (1057)
Q Consensus 931 ~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1057)
..++..|+|||++.+..++.++|||||||++|||++ |+.||........ ......... ..
T Consensus 274 ~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~-------------~~~~~~~~~------~~ 334 (374)
T cd05106 274 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK-------------FYKMVKRGY------QM 334 (374)
T ss_pred CCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH-------------HHHHHHccc------Cc
Confidence 335568999999988899999999999999999997 9999865322111 011111000 00
Q ss_pred HHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhH
Q 001544 1010 AAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIR 1048 (1057)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~ 1048 (1057)
..+...++++.+++.+||+.||++||++.|+++.|+++.
T Consensus 335 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 335 SRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred cCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 011124577899999999999999999999999999864
No 50
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.3e-37 Score=341.42 Aligned_cols=250 Identities=21% Similarity=0.324 Sum_probs=201.8
Q ss_pred CCCCceeccccCeEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 771 FSENNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
|+..+.||+|+||+||+|.. .+|+.||||.+.... ......+.+|++++++++|++|+++++++.+++..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 67789999999999999975 479999999986432 22335678899999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 847 MRNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
+++|+|.+++.... ..+++.++..++.|++.|++||| +.+|+||||||+||++++++.+||+|||+++.....
T Consensus 82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--- 155 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG--- 155 (285)
T ss_pred cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC---
Confidence 99999998876433 45899999999999999999999 999999999999999999999999999999865221
Q ss_pred cccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccccccc
Q 001544 926 MTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITE 1005 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1057)
.......|+..|+|||++.+..++.++||||+||++|||++|+.||........ ... ....+..
T Consensus 156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~-~~~---------~~~~~~~------ 219 (285)
T cd05631 156 ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK-REE---------VDRRVKE------ 219 (285)
T ss_pred CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh-HHH---------HHHHhhc------
Confidence 122345689999999999999999999999999999999999999875322110 000 0000000
Q ss_pred chhhHHHHHHHHHHHHHHhHcccCCCCCCCC-----HHHHHHH
Q 001544 1006 DKHFAAKEQCASSVFNLAMECTVESPDERIT-----AKEIVRR 1043 (1057)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~~ 1043 (1057)
........++.++.+++.+||+.||++||+ ++|+++|
T Consensus 220 -~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 220 -DQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred -ccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 001112245678899999999999999997 8999886
No 51
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=4.3e-37 Score=340.07 Aligned_cols=269 Identities=20% Similarity=0.255 Sum_probs=204.5
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
++|++.+.||+|+||+||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 46889999999999999999875 68899999986542 2345678899999999999999999999999999999999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
|++++.+..+.. ....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... .
T Consensus 81 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~ 155 (287)
T cd07848 81 YVEKNMLELLEE-MPNGVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS-N 155 (287)
T ss_pred cCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccc-c
Confidence 999987765543 3446899999999999999999999 9999999999999999999999999999998753221 2
Q ss_pred cccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccc--hhhhhhhccchhHHHhhhc----
Q 001544 926 MTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMT--LKHWVNDFLPISMMKIIDA---- 999 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---- 999 (1057)
.......++..|+|||++.+..++.++||||+||++|||++|+.||......+.. ....... .+....+....
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 234 (287)
T cd07848 156 ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGP-LPAEQMKLFYSNPRF 234 (287)
T ss_pred ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCC-CCHHHHHhhhccchh
Confidence 2223456889999999998888999999999999999999999998753221110 0000000 01110100000
Q ss_pred ------ccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1000 ------NLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1000 ------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
...............++.++.+++.+|++.||++|||++|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 235 HGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred cccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000000011122357789999999999999999999999875
No 52
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.9e-38 Score=327.93 Aligned_cols=262 Identities=26% Similarity=0.370 Sum_probs=197.6
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccC---C--eeEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNE---D--FKALI 843 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~---~--~~~lV 843 (1057)
.|...+++|+|+||.||+|... +++.||||++-...+- -.+|+++|+.++|||||++.-+|... + ...+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 4666799999999999999855 5799999998433321 13699999999999999999888442 2 33589
Q ss_pred EEEccCCChhHHHhc---CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC-CcEEEEcccccccc
Q 001544 844 LEYMRNGSLEKCLYS---GNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN-MVAHLSDFGIAKLL 919 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~Dfg~a~~~ 919 (1057)
||||+. +|.+.++. .+..++...+.-+++||++|++||| +.+||||||||.|+|+|.+ |.+||||||.|+.+
T Consensus 101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 999987 99888874 2345788888899999999999999 9999999999999999965 99999999999987
Q ss_pred cCCCCccccccccccccccCccccCCC-CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHh--
Q 001544 920 IGEDQSMTQTQTLATLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKI-- 996 (1057)
Q Consensus 920 ~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-- 996 (1057)
..... ...+..|..|+|||.+.+. .|+.+.||||.|||+.||+-|++-|.+ .++...+...++........++
T Consensus 177 ~~~ep---niSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG-~s~~dQL~eIik~lG~Pt~e~I~~ 252 (364)
T KOG0658|consen 177 VKGEP---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPG-DSSVDQLVEIIKVLGTPTREDIKS 252 (364)
T ss_pred ccCCC---ceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCC-CCHHHHHHHHHHHhCCCCHHHHhh
Confidence 54433 3556788999999988775 589999999999999999999998765 2222333444433322211111
Q ss_pred hhccc------ccccchhh-HHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 997 IDANL------LITEDKHF-AAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 997 ~~~~~------~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
..+.. ........ -.....+++..+++.+++.++|.+|.++.|+++|
T Consensus 253 mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 253 MNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred cCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 11110 00000000 1223567889999999999999999999999876
No 53
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=4.3e-37 Score=339.79 Aligned_cols=269 Identities=22% Similarity=0.304 Sum_probs=203.3
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccch-hHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHE-RAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
.++|+..++||+|+||+||+|... +++.||+|+++.... .....+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE 83 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence 356888999999999999999865 689999999865432 234567789999999999999999999999999999999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
|+++ +|.+++......+++..+..++.||+.||+||| +.+|+||||||+||++++++.+||+|||+++..... .
T Consensus 84 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~--~ 157 (288)
T cd07871 84 YLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVP--T 157 (288)
T ss_pred CCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECcCcceeeccCC--C
Confidence 9975 999988776666899999999999999999999 999999999999999999999999999999754221 1
Q ss_pred cccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhc--cchhH-HHhhh---
Q 001544 926 MTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDF--LPISM-MKIID--- 998 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~--- 998 (1057)
.......+++.|+|||++.+ ..++.++||||+||++|||++|+.||......+. ........ .+... ....+
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07871 158 KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEE-LHLIFRLLGTPTEETWPGITSNEE 236 (288)
T ss_pred ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChHHhhccccchh
Confidence 22234567899999998765 5689999999999999999999999865322111 11000000 00000 00000
Q ss_pred --cccccc--cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 999 --ANLLIT--EDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 999 --~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
...... ..........++.++.+++.+|+..||.+|||++|+++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 237 FRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred hhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000 000011112346778999999999999999999999875
No 54
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.6e-37 Score=343.54 Aligned_cols=246 Identities=24% Similarity=0.319 Sum_probs=202.8
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888999999999999999865 68999999986432 234567889999999999999999999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
||+++|+|.+++...+ .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~-- 154 (291)
T cd05612 81 EYVPGGELFSYLRNSG-RFSNSTGLFYASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR-- 154 (291)
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC--
Confidence 9999999999987654 5889999999999999999999 999999999999999999999999999999865321
Q ss_pred ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccc
Q 001544 925 SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLIT 1004 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1057)
.....|++.|+|||++.+..++.++||||+||++|||++|+.||......+ . ...+....
T Consensus 155 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~-----~--------~~~i~~~~---- 214 (291)
T cd05612 155 ---TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG-----I--------YEKILAGK---- 214 (291)
T ss_pred ---cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----H--------HHHHHhCC----
Confidence 123468899999999988889999999999999999999999986521110 0 00111100
Q ss_pred cchhhHHHHHHHHHHHHHHhHcccCCCCCCCC-----HHHHHHHH
Q 001544 1005 EDKHFAAKEQCASSVFNLAMECTVESPDERIT-----AKEIVRRL 1044 (1057)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~~L 1044 (1057)
...+..++..+.+++.+|++.||.+||+ +.|+++|-
T Consensus 215 ----~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~ 255 (291)
T cd05612 215 ----LEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHR 255 (291)
T ss_pred ----cCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCc
Confidence 0111234567899999999999999995 89988773
No 55
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.2e-37 Score=347.64 Aligned_cols=242 Identities=26% Similarity=0.352 Sum_probs=198.1
Q ss_pred ceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCC
Q 001544 775 NLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNG 850 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~g 850 (1057)
+.||+|+||.||+|... +|+.||||+++... ......+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999764 68999999997542 234466788999999999999999999999999999999999999
Q ss_pred ChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcccccc
Q 001544 851 SLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ 930 (1057)
Q Consensus 851 sL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 930 (1057)
+|.+++...+ .+++.++..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++..... ......
T Consensus 81 ~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~--~~~~~~ 154 (323)
T cd05571 81 ELFFHLSRER-VFSEDRARFYGAEIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD--GATMKT 154 (323)
T ss_pred cHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC--CCcccc
Confidence 9999887654 5899999999999999999999 999999999999999999999999999998753211 122334
Q ss_pred ccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhH
Q 001544 931 TLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFA 1010 (1057)
Q Consensus 931 ~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1057)
..||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+... ...
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--------------~~~~~~~~~-------~~~ 213 (323)
T cd05571 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------------KLFELILME-------EIR 213 (323)
T ss_pred eecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH--------------HHHHHHHcC-------CCC
Confidence 56899999999999889999999999999999999999998642110 000111000 001
Q ss_pred HHHHHHHHHHHHHhHcccCCCCCCC-----CHHHHHHH
Q 001544 1011 AKEQCASSVFNLAMECTVESPDERI-----TAKEIVRR 1043 (1057)
Q Consensus 1011 ~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 1043 (1057)
.+..++.++.+++.+|++.||++|| ++.|+++|
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 214 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 1124567789999999999999999 89999875
No 56
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.2e-37 Score=320.04 Aligned_cols=248 Identities=24% Similarity=0.364 Sum_probs=207.9
Q ss_pred hCCCCCCceeccccCeEEEEEEe-cCCcEEEEEEeecc---chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQ---HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALI 843 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 843 (1057)
..+|++.+.||+|.||+|-+|.. ..|+.||||.+++. +++..-.+.+|+++|+.++||||+.+++.|+..+...+|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 44688889999999999999975 67999999998654 445566789999999999999999999999999999999
Q ss_pred EEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC
Q 001544 844 LEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 923 (1057)
|||..+|.|.+++...+ .+++.++..+++||..|+.|+| .++|+|||+|.+|||+|+++.+||+|||++-++..
T Consensus 132 MEYaS~GeLYDYiSer~-~LsErEaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFGLSNly~~-- 205 (668)
T KOG0611|consen 132 MEYASGGELYDYISERG-SLSEREARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYAD-- 205 (668)
T ss_pred EEecCCccHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHh---hccceecccchhheeecCCCCeeeeccchhhhhcc--
Confidence 99999999999998766 4999999999999999999999 99999999999999999999999999999987632
Q ss_pred CccccccccccccccCccccCCCCC-CccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccc
Q 001544 924 QSMTQTQTLATLGYMAPEYGREGRV-STKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLL 1002 (1057)
Q Consensus 924 ~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1057)
....+..+|++-|.+||++.+..| ++.+|.||+||++|-++.|..||++.. ... +..-+.....
T Consensus 206 -~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D-----hk~---------lvrQIs~GaY 270 (668)
T KOG0611|consen 206 -KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD-----HKR---------LVRQISRGAY 270 (668)
T ss_pred -ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch-----HHH---------HHHHhhcccc
Confidence 234455689999999999998887 588999999999999999999998721 111 1111111111
Q ss_pred cccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 1003 ITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
.++ .-+....-+|+.|+..+|++|.|..+|..|-
T Consensus 271 rEP--------~~PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 271 REP--------ETPSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred cCC--------CCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 111 2245567899999999999999999998774
No 57
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2e-36 Score=341.23 Aligned_cols=265 Identities=21% Similarity=0.311 Sum_probs=206.4
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
.++|++.+.||+|+||.||+|+.. +|..||+|.+.... ......+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 357899999999999999999865 68899999987543 3445779999999999999999999999999999999999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCC-CeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSA-PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~-~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
|+++|+|.+++.... .+++..+..++.|++.|++||| +. +|+||||||+||+++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 157 (331)
T cd06649 84 HMDGGSLDQVLKEAK-RIPEEILGKVSIAVLRGLAYLR---EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 157 (331)
T ss_pred cCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHh---hcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc--
Confidence 999999999987654 4889999999999999999999 64 6999999999999999999999999998765221
Q ss_pred ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhc---------------c
Q 001544 925 SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDF---------------L 989 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~---------------~ 989 (1057)
......|+..|+|||++.+..++.++||||+||++|||++|+.||......+ +....... .
T Consensus 158 --~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 233 (331)
T cd06649 158 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE--LEAIFGRPVVDGEEGEPHSISPRP 233 (331)
T ss_pred --ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHhcccccccccCCccccCccc
Confidence 2233468899999999998899999999999999999999999996432111 00000000 0
Q ss_pred ----------------chhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 990 ----------------PISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 990 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
.....+..+....... ... ....++.++.+++.+||+.||++|||+.|+++|-
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 234 RPPGRPVSGHGMDSRPAMAIFELLDYIVNEPP-PKL-PNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred ccccccccccccccccchhHHHHHHHHHhCCC-cCC-CCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 0000000000000000 000 0113567899999999999999999999999985
No 58
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.2e-37 Score=338.35 Aligned_cols=249 Identities=34% Similarity=0.562 Sum_probs=196.3
Q ss_pred CCceeccccCeEEEEEEec-----CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 773 ENNLIGRGSFGSVYIARLQ-----NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 773 ~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
..+.||+|.||.||+|.+. .+..|+||+++... ....+.+.+|++.+++++||||++++|++...+..++||||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 3478999999999999876 36789999996543 34478899999999999999999999999988889999999
Q ss_pred ccCCChhHHHhcC-CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 847 MRNGSLEKCLYSG-NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 847 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
+++|+|.+++... ...+++.++.+|+.||++||+||| +.+++||||+++||++++++.+||+|||++.........
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~ 159 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY 159 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred cccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999887 567999999999999999999999 899999999999999999999999999999876322222
Q ss_pred cccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccccc
Q 001544 926 MTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLIT 1004 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1057)
...........|+|||.+....++.++||||||+++||+++ |+.||.+.... .+ ...+.+..
T Consensus 160 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~-----~~--------~~~~~~~~---- 222 (259)
T PF07714_consen 160 KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNE-----EI--------IEKLKQGQ---- 222 (259)
T ss_dssp EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHH-----HH--------HHHHHTTE----
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccc-----cc--------cccccccc----
Confidence 33334456778999999988889999999999999999999 67887653111 10 01111111
Q ss_pred cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 1005 EDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
+...+..++..+.+++.+||+.+|++||++.|+++.|
T Consensus 223 ---~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 223 ---RLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ---ETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ---cceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1112234577789999999999999999999999876
No 59
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=7.8e-37 Score=337.32 Aligned_cols=256 Identities=29% Similarity=0.518 Sum_probs=208.3
Q ss_pred CCCCCCceeccccCeEEEEEEecC------CcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQN------GIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKA 841 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 841 (1057)
++|++.+.||+|+||.||+|.... ...||+|.++... .....++.+|++++++++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 367888999999999999997542 2579999986443 344567899999999999999999999999999999
Q ss_pred EEEEEccCCChhHHHhcCC---------------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC
Q 001544 842 LILEYMRNGSLEKCLYSGN---------------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM 906 (1057)
Q Consensus 842 lV~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~ 906 (1057)
++|||+++|+|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccccceEEEcCCC
Confidence 9999999999999986532 34788899999999999999999 99999999999999999999
Q ss_pred cEEEEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhh
Q 001544 907 VAHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWV 985 (1057)
Q Consensus 907 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~ 985 (1057)
.+||+|||+++...............+++.|+|||...+..++.++|||||||++|||++ |..||......
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~-------- 233 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ-------- 233 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH--------
Confidence 999999999986543333333344456788999999988889999999999999999998 99998652211
Q ss_pred hhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHh
Q 001544 986 NDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKI 1047 (1057)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 1047 (1057)
.....+.... ....+..++.++.+++.+||+.||++||++.|++++|+.+
T Consensus 234 ------~~~~~i~~~~------~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 234 ------EVIEMIRSRQ------LLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred ------HHHHHHHcCC------cCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 1111111110 1112345778899999999999999999999999999753
No 60
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=5.3e-37 Score=343.95 Aligned_cols=258 Identities=24% Similarity=0.388 Sum_probs=207.4
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCc----EEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGI----EVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKAL 842 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 842 (1057)
.+|+..+.||+|+||.||+|.+. +++ .||||+++... ....+++.+|+.+++.++||||+++++++... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 46889999999999999999853 333 48999986443 34557888999999999999999999998764 5679
Q ss_pred EEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCC
Q 001544 843 ILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 922 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 922 (1057)
|+||+++|+|.+++......+++..+..++.||+.||+||| +.+|+||||||+||++++++.+||+|||+++.+...
T Consensus 86 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 162 (316)
T cd05108 86 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAD 162 (316)
T ss_pred eeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEecCCCcEEEccccccccccCC
Confidence 99999999999999887767899999999999999999999 999999999999999999999999999999876433
Q ss_pred CCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhccc
Q 001544 923 DQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANL 1001 (1057)
Q Consensus 923 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1057)
..........++..|+|||.+.+..++.++|||||||++||+++ |+.||+.....+ .........
T Consensus 163 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~--------------~~~~~~~~~ 228 (316)
T cd05108 163 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--------------ISSILEKGE 228 (316)
T ss_pred CcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH--------------HHHHHhCCC
Confidence 22222223334678999999998999999999999999999998 999986521110 111111110
Q ss_pred ccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHHH
Q 001544 1002 LITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRDF 1050 (1057)
Q Consensus 1002 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 1050 (1057)
..+.+..++.++.+++.+||..+|++||++.+++.++.++.+.
T Consensus 229 ------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~ 271 (316)
T cd05108 229 ------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 271 (316)
T ss_pred ------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence 1111223556788999999999999999999999999888654
No 61
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=7.7e-37 Score=338.01 Aligned_cols=261 Identities=28% Similarity=0.485 Sum_probs=211.4
Q ss_pred CCCCCCceeccccCeEEEEEEe------cCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARL------QNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKAL 842 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 842 (1057)
.+|.+.+.||+|+||+||++.. .++..||+|.+........+.+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 4678889999999999999974 2356799999976666667789999999999999999999999999999999
Q ss_pred EEEEccCCChhHHHhcCC------------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEE
Q 001544 843 ILEYMRNGSLEKCLYSGN------------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHL 910 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~~------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 910 (1057)
||||+++++|.+++.... ..+++.++..++.|++.||+||| +++++||||||+||++++++.+|+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH---~~~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCcEEe
Confidence 999999999999986432 24899999999999999999999 999999999999999999999999
Q ss_pred EcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhcc
Q 001544 911 SDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFL 989 (1057)
Q Consensus 911 ~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 989 (1057)
+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||......+
T Consensus 162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~----------- 230 (288)
T cd05093 162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE----------- 230 (288)
T ss_pred ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----------
Confidence 99999986533322222333445778999999988889999999999999999998 888876532111
Q ss_pred chhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHHHHh
Q 001544 990 PISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRDFLL 1052 (1057)
Q Consensus 990 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~ 1052 (1057)
..+.+..... ......++.++.+++.+||+.+|.+|||+.|+.+.|+++.+...
T Consensus 231 ---~~~~i~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~~ 284 (288)
T cd05093 231 ---VIECITQGRV------LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKASP 284 (288)
T ss_pred ---HHHHHHcCCc------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhcc
Confidence 0001100000 00112345678999999999999999999999999999987643
No 62
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=9.7e-37 Score=349.30 Aligned_cols=259 Identities=24% Similarity=0.410 Sum_probs=206.5
Q ss_pred hCCCCCCceeccccCeEEEEEEec------CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcC-CCCceeEeeeeccCCe
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ------NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIR-HRNLTKIISSCSNEDF 839 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 839 (1057)
.++|.+.++||+|+||.||+|+.. .+..||||+++... ....+.+.+|+++++++. ||||++++++|.+.+.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 457888999999999999999753 23579999996443 334567899999999996 9999999999999999
Q ss_pred eEEEEEEccCCChhHHHhcCC-----------------------------------------------------------
Q 001544 840 KALILEYMRNGSLEKCLYSGN----------------------------------------------------------- 860 (1057)
Q Consensus 840 ~~lV~E~~~~gsL~~~l~~~~----------------------------------------------------------- 860 (1057)
.++||||+++|+|.++++...
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 999999999999999876421
Q ss_pred ------------------------------------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC
Q 001544 861 ------------------------------------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD 904 (1057)
Q Consensus 861 ------------------------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~ 904 (1057)
..+++.++..++.|+++|++||| +.+|+||||||+||++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHhEEEeC
Confidence 23678888999999999999999 899999999999999999
Q ss_pred CCcEEEEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhh
Q 001544 905 NMVAHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKH 983 (1057)
Q Consensus 905 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~ 983 (1057)
++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |+.||........
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~---- 348 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST---- 348 (400)
T ss_pred CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH----
Confidence 99999999999986533222222233446778999999988889999999999999999997 8899865321111
Q ss_pred hhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhH
Q 001544 984 WVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIR 1048 (1057)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~ 1048 (1057)
....+... .....+..++.++.+++.+||+.+|++||++.++.+.|+++.
T Consensus 349 ---------~~~~~~~~------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 349 ---------FYNKIKSG------YRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred ---------HHHHHhcC------CCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 01111110 011122346778999999999999999999999999998764
No 63
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-37 Score=336.12 Aligned_cols=255 Identities=25% Similarity=0.415 Sum_probs=219.3
Q ss_pred CCCCCceeccccCeEEEEEEecC---C--cEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQN---G--IEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALI 843 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~~---~--~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 843 (1057)
..+..++||+|.||.||+|.+.+ | -.||||.-+... ....+.|..|..+|++++||||++++|.|.+.. .++|
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P-~Wiv 468 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQP-MWIV 468 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccc-eeEE
Confidence 34456789999999999997542 3 358888876643 345788999999999999999999999998655 4799
Q ss_pred EEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC
Q 001544 844 LEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 923 (1057)
||.++-|.|..+++.....++......++.||..||+||| +.++|||||..+|||+.....+|++|||+++++....
T Consensus 469 mEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~ 545 (974)
T KOG4257|consen 469 MELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDA 545 (974)
T ss_pred EecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccchhhhccccc
Confidence 9999999999999999988999999999999999999999 9999999999999999999999999999999985443
Q ss_pred CccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccc
Q 001544 924 QSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLL 1002 (1057)
Q Consensus 924 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1057)
+...+...-...|||||-+.-.+++.++|||.|||++||+++ |..||...... |....
T Consensus 546 -yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNs--------------------DVI~~ 604 (974)
T KOG4257|consen 546 -YYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNS--------------------DVIGH 604 (974)
T ss_pred -hhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccccc--------------------ceEEE
Confidence 334444455678999999999999999999999999999977 88998764333 23334
Q ss_pred cccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHH
Q 001544 1003 ITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRD 1049 (1057)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~ 1049 (1057)
.+.+.+.+.++.|++.++.++.+||+++|.+||++.|+...|.++.+
T Consensus 605 iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 605 IENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred ecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 55667788889999999999999999999999999999999998866
No 64
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=7.3e-37 Score=332.15 Aligned_cols=251 Identities=25% Similarity=0.408 Sum_probs=203.0
Q ss_pred CCCCCCceeccccCeEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEcc
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMR 848 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 848 (1057)
++|++.+.||+|+||.||+|..+++..+|+|.+.... ...+++.+|++++++++||||+++++++.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 3577889999999999999998888899999886432 234678899999999999999999999999999999999999
Q ss_pred CCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcccc
Q 001544 849 NGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQ 928 (1057)
Q Consensus 849 ~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 928 (1057)
+|+|.++++.....+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+|++|||.++...... ....
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~-~~~~ 158 (256)
T cd05114 83 NGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE-YTSS 158 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCccccCCCc-eecc
Confidence 99999999866556899999999999999999999 9999999999999999999999999999988653221 1112
Q ss_pred ccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccccccch
Q 001544 929 TQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDK 1007 (1057)
Q Consensus 929 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1057)
....++..|+|||...+..++.++||||||+++|||++ |+.||...... .... .+.....
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~--~~~~-----------~i~~~~~------ 219 (256)
T cd05114 159 SGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY--EVVE-----------MISRGFR------ 219 (256)
T ss_pred CCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHH-----------HHHCCCC------
Confidence 22334568999999988889999999999999999999 88898652111 0000 1110000
Q ss_pred hhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 1008 HFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
...+...+.++.+++.+||+.+|++||++.|+++.|
T Consensus 220 -~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 220 -LYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred -CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 001122356789999999999999999999999876
No 65
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=4.6e-37 Score=320.54 Aligned_cols=271 Identities=25% Similarity=0.314 Sum_probs=205.4
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccch--hHHHHHHHHHHHHHhcCCCC-ceeEeeeeccCC------
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHE--RAFKSFDTECEVMKSIRHRN-LTKIISSCSNED------ 838 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~------ 838 (1057)
..|...++||+|+||+||+|+.+ +|+.||+|+++...+ ..-....+|+.++++++|+| |+++++++....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 34566688999999999999854 789999999976543 34456688999999999999 999999997766
Q ss_pred eeEEEEEEccCCChhHHHhcCC---ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccc
Q 001544 839 FKALILEYMRNGSLEKCLYSGN---YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGI 915 (1057)
Q Consensus 839 ~~~lV~E~~~~gsL~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 915 (1057)
..++||||++. +|.+++.... ..++...+..++.|+++|++||| +++|+||||||.||+++++|.+||+|||+
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCcceEEECCCCcEeeeccch
Confidence 88999999976 9999987765 34777899999999999999999 99999999999999999999999999999
Q ss_pred cccccCCCCccccccccccccccCccccCCC-CCCccchHHHHHHHHHHHhhCCCCCCcccccccc-----------hhh
Q 001544 916 AKLLIGEDQSMTQTQTLATLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMT-----------LKH 983 (1057)
Q Consensus 916 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~-----------~~~ 983 (1057)
|+... -.....+..++|..|+|||++.+. .|+...|+||+||+++||++++.-|....+.+.. ...
T Consensus 167 Ara~~--ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~ 244 (323)
T KOG0594|consen 167 ARAFS--IPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKD 244 (323)
T ss_pred HHHhc--CCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccC
Confidence 98652 123346677899999999998877 6889999999999999999999877653221110 011
Q ss_pred hhhhccchhHHHhhhccc-ccc-cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH--HHHhHH
Q 001544 984 WVNDFLPISMMKIIDANL-LIT-EDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR--LLKIRD 1049 (1057)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~--L~~i~~ 1049 (1057)
|-... .....+... ... ........+...+...+++.+|++++|.+|.|++.+++| +.++.+
T Consensus 245 Wp~v~----~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~ 310 (323)
T KOG0594|consen 245 WPGVS----SLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPE 310 (323)
T ss_pred CCCcc----ccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccccc
Confidence 11000 000000000 000 000001111222478899999999999999999999998 665533
No 66
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.3e-36 Score=332.25 Aligned_cols=256 Identities=27% Similarity=0.481 Sum_probs=208.3
Q ss_pred CCCCCCceeccccCeEEEEEEec----CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ----NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALI 843 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 843 (1057)
++|++.+.||+|+||+||+|.+. +...||||+++... .....++.+|+.++++++||||+++++++.+.+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 56888999999999999999864 24689999986543 34456788999999999999999999999999999999
Q ss_pred EEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC
Q 001544 844 LEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 923 (1057)
|||+++++|.+++......+++.++.+++.|++.|++||| +++|+||||||+||++++++.++++|||+++......
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd05033 84 TEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSE 160 (266)
T ss_pred EEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEEECccchhhcccccc
Confidence 9999999999999876667899999999999999999999 8999999999999999999999999999998764222
Q ss_pred CccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccc
Q 001544 924 QSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLL 1002 (1057)
Q Consensus 924 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1057)
.........++..|+|||...+..++.++||||||+++|||++ |..||......+ ..+.+....
T Consensus 161 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~--------------~~~~~~~~~- 225 (266)
T cd05033 161 ATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD--------------VIKAVEDGY- 225 (266)
T ss_pred cceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH--------------HHHHHHcCC-
Confidence 2222222334678999999988899999999999999999998 998985421110 011111000
Q ss_pred cccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHh
Q 001544 1003 ITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKI 1047 (1057)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 1047 (1057)
..+.+..++..+.+++.+|++.+|++||++.|++++|+++
T Consensus 226 -----~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 226 -----RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred -----CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0011234567789999999999999999999999999875
No 67
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-37 Score=339.05 Aligned_cols=251 Identities=25% Similarity=0.386 Sum_probs=213.9
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCe-eEEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDF-KALI 843 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lV 843 (1057)
.++|...+++|+|+||.++.++.+ +++.|++|.+.... .........|+.++++++|||||.+.+.|.+++. .+||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 357888999999999999998644 67899999986543 3444577889999999999999999999999888 9999
Q ss_pred EEEccCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCC
Q 001544 844 LEYMRNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 922 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 922 (1057)
|+|++||++.+.+.+.+ ..+++.++..|+.|++.|+.||| +..|+|||||+.|||+++++.+|++|||+|+.+.+.
T Consensus 83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 99999999999987766 77999999999999999999999 999999999999999999999999999999988543
Q ss_pred CCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccc
Q 001544 923 DQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLL 1002 (1057)
Q Consensus 923 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1057)
. ......+||+.||+||.+.+..|..|+|+||+||++|||++-+++|........ ..++....
T Consensus 160 ~--~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~L-------------i~ki~~~~-- 222 (426)
T KOG0589|consen 160 D--SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSEL-------------ILKINRGL-- 222 (426)
T ss_pred h--hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHH-------------HHHHhhcc--
Confidence 3 345567899999999999999999999999999999999999999876322111 12222211
Q ss_pred cccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1003 ITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
..+.+...+.++..++..|+..+|+.||++.+++.+
T Consensus 223 -----~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 223 -----YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred -----CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 123345678889999999999999999999999987
No 68
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=7.1e-37 Score=345.51 Aligned_cols=251 Identities=22% Similarity=0.345 Sum_probs=204.6
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
++|++.+.||+|+||.||+|+.. +++.||||+++... ......+.+|++++.+++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36888999999999999999876 58999999996542 234567888999999999999999999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
||+++|+|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~--- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLG-VLSEDHARFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT--- 153 (333)
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCcCCccccc---
Confidence 9999999999987654 5889999999999999999999 99999999999999999999999999999986522
Q ss_pred ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCccccccc--chhhhhhhccchhHHHhhhcccc
Q 001544 925 SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEM--TLKHWVNDFLPISMMKIIDANLL 1002 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1057)
......||+.|+|||++.+..++.++||||+||++|||++|+.||......+. ....|.. ...
T Consensus 154 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~---------~~~---- 218 (333)
T cd05600 154 --YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKE---------TLQ---- 218 (333)
T ss_pred --ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccc---------ccc----
Confidence 22345689999999999988999999999999999999999999865221110 0000100 000
Q ss_pred cccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1003 ITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
..........++.++.+++.+|+..+|++||++.|+++|
T Consensus 219 --~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 219 --RPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred --CCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 000000012356788999999999999999999999987
No 69
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.1e-36 Score=339.22 Aligned_cols=270 Identities=21% Similarity=0.272 Sum_probs=201.9
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccch-hHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHE-RAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
.++|++.+.||+|+||+||+|+.. +++.||||+++.... .....+.+|++++++++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 467999999999999999999865 689999999865432 223467789999999999999999999999999999999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
|++ +++.+++......++...+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..... .
T Consensus 84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~ 157 (303)
T cd07869 84 YVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLADFGLARAKSVP--S 157 (303)
T ss_pred CCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECCCCcceeccCC--C
Confidence 996 5888888766666899999999999999999999 999999999999999999999999999998754221 2
Q ss_pred cccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhcc--chhH----H--Hh
Q 001544 926 MTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFL--PISM----M--KI 996 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~--~~~~----~--~~ 996 (1057)
.......+++.|+|||++.+ ..++.++||||+||++|||++|+.||.................. .... . ..
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (303)
T cd07869 158 HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPH 237 (303)
T ss_pred ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccc
Confidence 22334567899999998765 45788999999999999999999999764221111111100000 0000 0 00
Q ss_pred hhcccc-cccchhhH---HHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 997 IDANLL-ITEDKHFA---AKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 997 ~~~~~~-~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.+.... ........ .....+..+.+++.+|++.||++|||+.|+++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 238 FKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred cccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 000000 00000000 001134578899999999999999999999875
No 70
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=3.2e-37 Score=347.16 Aligned_cols=245 Identities=23% Similarity=0.317 Sum_probs=201.9
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 46888999999999999999865 68999999986432 234567889999999999999999999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 98 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-- 171 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG-RFPNDVAKFYHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR-- 171 (329)
T ss_pred cCCCCChHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC--
Confidence 9999999999987654 4888899999999999999999 999999999999999999999999999999865321
Q ss_pred ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccc
Q 001544 925 SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLIT 1004 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1057)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ... ...+....
T Consensus 172 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~----~~~---------~~~i~~~~---- 231 (329)
T PTZ00263 172 ---TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP----FRI---------YEKILAGR---- 231 (329)
T ss_pred ---cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH----HHH---------HHHHhcCC----
Confidence 1234689999999999988899999999999999999999999864211 000 00111100
Q ss_pred cchhhHHHHHHHHHHHHHHhHcccCCCCCCCC-----HHHHHHH
Q 001544 1005 EDKHFAAKEQCASSVFNLAMECTVESPDERIT-----AKEIVRR 1043 (1057)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~~ 1043 (1057)
...+..++.++.+++.+||+.||++||+ +.|+++|
T Consensus 232 ----~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 232 ----LKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred ----cCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 0111224567889999999999999996 7888876
No 71
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-39 Score=369.97 Aligned_cols=507 Identities=29% Similarity=0.335 Sum_probs=336.6
Q ss_pred EeeecccCcccccccccCCCCCcEEeCCCCCccccCCcccccccccceeecccccccCCCCccccccCCCCeEeccCCCC
Q 001544 76 LNISYLSLTGNIPRQLGNLSSLEILDLNFNRLSGEIPWELGNLAKLEKLLLHNNFLTGTIPFSIFKLSSLLDLKLSDNNL 155 (1057)
Q Consensus 76 l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l 155 (1057)
+|.++..+. .||..+..-..++.|+++.|-+-...-+.+...-+|+.|++++|+++ ..|..+..+.+|+.|+++.|.+
T Consensus 3 vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i 80 (1081)
T KOG0618|consen 3 VDASDEQLE-LIPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYI 80 (1081)
T ss_pred cccccccCc-ccchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhH
Confidence 456666666 67777766666888888888665222223444455888888888888 7888888888888888888888
Q ss_pred CCCCCcccccCCCCCceeEccCCcccccCchhhhccccCCeeEeeccCCccccCccccCCCCcccEEEeeccccccCccc
Q 001544 156 TGTIPSHNLGNLSSLQLLDLSDNQLSGSIPSFIFKISSLQALHFGNNRLSGELPANICDNLPFLNFFSVYKNMFYGGISS 235 (1057)
Q Consensus 156 ~~~~p~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~l~~n~~~~~~~~ 235 (1057)
. .+|. .++++.+|++|.|.+|.+. ..|..+..+.+|+.|+++.|++. .+|.
T Consensus 81 ~-~vp~-s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl------------------------- 131 (1081)
T KOG0618|consen 81 R-SVPS-SCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPL------------------------- 131 (1081)
T ss_pred h-hCch-hhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCch-------------------------
Confidence 7 6664 5888888888888888887 78888888888888888888885 4443
Q ss_pred cccCCCCCcEEEccCCCCcCCccccccCcCCCcEEeeeccccccccCccccccccccEEEeecCccccccCccccccccc
Q 001544 236 TLSNCKHLRILDLSFNDLWGDIPKEIGNLTKLKELFLDFNILQGEIPHTVGNLHNLEYLSLVNNELVGTVPATIFNVSTL 315 (1057)
Q Consensus 236 ~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 315 (1057)
.+..+..++.++.++|.... .++... ++.++|..|.+.+.++..+..++. .|||+.|.+. ...+.++.+|
T Consensus 132 ~i~~lt~~~~~~~s~N~~~~----~lg~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~l 201 (1081)
T KOG0618|consen 132 VIEVLTAEEELAASNNEKIQ----RLGQTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLSNLANL 201 (1081)
T ss_pred hHHhhhHHHHHhhhcchhhh----hhcccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhhhccch
Confidence 34556667777777772221 122222 777777777777777777776665 6888888775 2335567777
Q ss_pred cEEEecCCccccCCCCCcccCCCCCceEEecCccccccCCccccccccccccccccccccccccchhcccccccEEeccC
Q 001544 316 KLIELSNNTFFGSLPSSTDVQLPNLEELYLWGNNFSGTLPSFIFNASNLSKLSLGDNSFSGLIPNTFGNLRNLKRLRLYN 395 (1057)
Q Consensus 316 ~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 395 (1057)
+.|....|.+.. .....++|+.|+.++|.++...+. ....+|+++++++|++++. |+++..+.+|+.++..+
T Consensus 202 ~~l~c~rn~ls~-----l~~~g~~l~~L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~~l-p~wi~~~~nle~l~~n~ 273 (1081)
T KOG0618|consen 202 EVLHCERNQLSE-----LEISGPSLTALYADHNPLTTLDVH--PVPLNLQYLDISHNNLSNL-PEWIGACANLEALNANH 273 (1081)
T ss_pred hhhhhhhcccce-----EEecCcchheeeeccCcceeeccc--cccccceeeecchhhhhcc-hHHHHhcccceEecccc
Confidence 788877777652 112457888899999888843332 2346789999999999876 58899999999999999
Q ss_pred cccCCCccccccccCCCcchhhhhccCCCcccccccccccccccccEEEcCCCcccccccccccCccCCcEEEccCCcCC
Q 001544 396 NYLTSPELSFLSSLSNCKYLEIIALSGNPLNGIIPMSAGNLSHSLEELFMPDCNVSGRIPKEIGNLANLVTLDLGGNKFN 475 (1057)
Q Consensus 396 N~l~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~i~ 475 (1057)
|+++..+... ...++|+.|.+..|.+. -+|.....++.|++|||..|+|.
T Consensus 274 N~l~~lp~ri----~~~~~L~~l~~~~nel~--------------------------yip~~le~~~sL~tLdL~~N~L~ 323 (1081)
T KOG0618|consen 274 NRLVALPLRI----SRITSLVSLSAAYNELE--------------------------YIPPFLEGLKSLRTLDLQSNNLP 323 (1081)
T ss_pred hhHHhhHHHH----hhhhhHHHHHhhhhhhh--------------------------hCCCcccccceeeeeeehhcccc
Confidence 9886654332 33455666666666654 24455566778888888888888
Q ss_pred CCCCcccccccc-cceeecccccCcccCCcccccccccceEEecCeeeeecCCccccCcccccccccCCccccccccccc
Q 001544 476 GSIPIALGKLQK-LQLLNLDDNKLEGSIPDDICGLVELYKLALGDNKLSGQIPACFGNLASLRELWLGPNELISFIPSTF 554 (1057)
Q Consensus 476 ~~~p~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 554 (1057)
...+..|..+.. |+.|+.+.|++.....-.=..+..|+.|++.+|.++...-..+.++.+|+.|+|++|++.+++...+
T Consensus 324 ~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~ 403 (1081)
T KOG0618|consen 324 SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKL 403 (1081)
T ss_pred ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHH
Confidence 443434444444 7777777777764433333344556666666776665554556666666666666666666666666
Q ss_pred cccccccEEEeccccccCCCchhhccccccceeccccccccccccccccCccccceecccccccccccCccccccCccce
Q 001544 555 WNIKDIMYVNFSSNFLTGPLPLEIENLKALTTLDFSMNNLSGVIPTTIGGLKGLQYLFLGHNRLQGSIPDSVGDLISLKS 634 (1057)
Q Consensus 555 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 634 (1057)
.++..|+.|+||+|+++. +|..+.++..|++|...+|+|. ..| .+..++.|+.+|+|.|+|+...-..-..-++|++
T Consensus 404 ~kle~LeeL~LSGNkL~~-Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~Lky 480 (1081)
T KOG0618|consen 404 RKLEELEELNLSGNKLTT-LPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKY 480 (1081)
T ss_pred hchHHhHHHhcccchhhh-hhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccce
Confidence 666666666666666663 5566666666666666666665 444 5666666666666666665432222222256666
Q ss_pred ecccCccccCCCcccccCcccccccccCCC
Q 001544 635 LNLSNNNLSGPIPTSLEKLSDLKELNLSFN 664 (1057)
Q Consensus 635 L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N 664 (1057)
|||++|.-....-..|..+.++...++.-|
T Consensus 481 LdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 481 LDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred eeccCCcccccchhhhHHhhhhhheecccC
Confidence 666666532233344445555555555444
No 72
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.7e-36 Score=343.84 Aligned_cols=267 Identities=21% Similarity=0.289 Sum_probs=198.4
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc--chhHHHHHHHHHHHHHhcCCCCceeEeeeeccC-----CeeE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ--HERAFKSFDTECEVMKSIRHRNLTKIISSCSNE-----DFKA 841 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~ 841 (1057)
+|++.++||+|+||.||+|... +|+.||||++... ......++.+|++++++++||||+++++++... ...|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4788899999999999999854 6899999998643 223345788999999999999999999987432 3579
Q ss_pred EEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccC
Q 001544 842 LILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIG 921 (1057)
Q Consensus 842 lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 921 (1057)
+||||++ ++|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 lv~e~~~-~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 155 (338)
T cd07859 81 VVFELME-SDLHQVIKAND-DLTPEHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVAFN 155 (338)
T ss_pred EEEecCC-CCHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCcccccccc
Confidence 9999995 68988886554 4899999999999999999999 99999999999999999999999999999986432
Q ss_pred CCC-ccccccccccccccCccccCC--CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhcc---c-----
Q 001544 922 EDQ-SMTQTQTLATLGYMAPEYGRE--GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFL---P----- 990 (1057)
Q Consensus 922 ~~~-~~~~~~~~~t~~y~aPE~~~~--~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~---~----- 990 (1057)
... ........+|..|+|||++.+ ..++.++||||+||++|||++|+.||...... ....++.... +
T Consensus 156 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~ 233 (338)
T cd07859 156 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV--HQLDLITDLLGTPSPETIS 233 (338)
T ss_pred ccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChH--HHHHHHHHHhCCCCHHHHH
Confidence 221 122234578999999998765 67899999999999999999999998652211 0000110000 0
Q ss_pred ----hhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 991 ----ISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 991 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.......+..............+.+++++.+++.+||+.||++||+++|+++|
T Consensus 234 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 234 RVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00001111000000000001112345678999999999999999999999987
No 73
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=350.33 Aligned_cols=257 Identities=26% Similarity=0.371 Sum_probs=208.6
Q ss_pred CCCCCCceeccccCeEEEEEEecCC-cEEEEEEeeccchhHHHHHHHHHHHHHhcC-CCCceeEeee-ecc------CCe
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQNG-IEVAVKTFDLQHERAFKSFDTECEVMKSIR-HRNLTKIISS-CSN------EDF 839 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~-~~~------~~~ 839 (1057)
.++++.++|.+|||+.||.|.+..+ ..||+|++-..++.+.+.+.+||++|++|+ |+|||.+++. ... ..+
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 3566789999999999999987765 999999997778888899999999999997 9999999993 211 246
Q ss_pred eEEEEEEccCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccccccc
Q 001544 840 KALILEYMRNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 918 (1057)
Q Consensus 840 ~~lV~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 918 (1057)
.++.||||.||.|-+++...- ..+++.++++|+.|+++|+++|| .+..+|||||||.+|||++.+|..||||||.|.-
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH-~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt 195 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMH-YLKPPIIHRDLKIENVLLSADGNYKLCDFGSATT 195 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHh-cCCCccchhhhhhhheEEcCCCCEEeCccccccc
Confidence 789999999999999987433 34999999999999999999999 4567799999999999999999999999999975
Q ss_pred ccCCCCcc-------ccccccccccccCcccc---CCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhc
Q 001544 919 LIGEDQSM-------TQTQTLATLGYMAPEYG---REGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDF 988 (1057)
Q Consensus 919 ~~~~~~~~-------~~~~~~~t~~y~aPE~~---~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~ 988 (1057)
........ .......|+.|+|||.+ .+..+++|+|||++||++|-++....||++.-. .
T Consensus 196 ~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~--l--------- 264 (738)
T KOG1989|consen 196 KILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK--L--------- 264 (738)
T ss_pred ccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc--e---------
Confidence 32211111 11123468999999965 577899999999999999999999999987211 1
Q ss_pred cchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHH
Q 001544 989 LPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRD 1049 (1057)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~ 1049 (1057)
.++ .....++....++..+.+||+.||+++|++||++-+|+.++.++..
T Consensus 265 ------aIl------ng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 265 ------AIL------NGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred ------eEE------eccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 111 1111223334678889999999999999999999999999988864
No 74
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.5e-36 Score=330.74 Aligned_cols=255 Identities=25% Similarity=0.432 Sum_probs=206.9
Q ss_pred hCCCCCCceeccccCeEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
.++|++.++||+|+||.||+|...+++.||+|.+.... ...+.+.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 34688899999999999999998888899999986543 23578899999999999999999999999999999999999
Q ss_pred cCCChhHHHhcC-CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 848 RNGSLEKCLYSG-NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 848 ~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
++|+|.+++... ...+++.++..++.|+++|++||| +.+++||||||+||++++++.++++|||.++...... ..
T Consensus 84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-~~ 159 (261)
T cd05072 84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE-YT 159 (261)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccceecCCCc-ee
Confidence 999999998754 355889999999999999999999 8999999999999999999999999999998653221 11
Q ss_pred ccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhccccccc
Q 001544 927 TQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITE 1005 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1057)
......++..|+|||+...+.++.++|||||||++|||++ |+.||...... ....+ +....
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~------------~~~~~---- 221 (261)
T cd05072 160 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS--DVMSA------------LQRGY---- 221 (261)
T ss_pred ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH--HHHHH------------HHcCC----
Confidence 1222345678999999988889999999999999999998 89998642111 01111 00000
Q ss_pred chhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHh
Q 001544 1006 DKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKI 1047 (1057)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 1047 (1057)
..+....++.++.+++.+|++.+|++||++.++.+.|+++
T Consensus 222 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 222 --RMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred --CCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 0111123566789999999999999999999999999863
No 75
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=9.8e-37 Score=342.26 Aligned_cols=242 Identities=25% Similarity=0.350 Sum_probs=197.4
Q ss_pred ceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCC
Q 001544 775 NLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNG 850 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~g 850 (1057)
+.||+|+||.||+|... +|+.||+|+++... ......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999864 68999999996542 234566788999999999999999999999999999999999999
Q ss_pred ChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcccccc
Q 001544 851 SLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ 930 (1057)
Q Consensus 851 sL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 930 (1057)
+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..... ......
T Consensus 81 ~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~--~~~~~~ 154 (323)
T cd05595 81 ELFFHLSRER-VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKT 154 (323)
T ss_pred cHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCC--CCcccc
Confidence 9998887654 5899999999999999999999 999999999999999999999999999998753221 122233
Q ss_pred ccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhH
Q 001544 931 TLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFA 1010 (1057)
Q Consensus 931 ~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1057)
..||+.|+|||++.+..++.++||||+||++|||++|+.||......+. ......... .
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~-------------~~~~~~~~~--------~ 213 (323)
T cd05595 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL-------------FELILMEEI--------R 213 (323)
T ss_pred ccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHH-------------HHHHhcCCC--------C
Confidence 5689999999999988999999999999999999999999865211100 000100000 0
Q ss_pred HHHHHHHHHHHHHhHcccCCCCCCC-----CHHHHHHH
Q 001544 1011 AKEQCASSVFNLAMECTVESPDERI-----TAKEIVRR 1043 (1057)
Q Consensus 1011 ~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 1043 (1057)
.+..+++++.+++.+||+.||++|| ++.++++|
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 214 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 1124567789999999999999998 89998876
No 76
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.8e-36 Score=341.64 Aligned_cols=259 Identities=27% Similarity=0.442 Sum_probs=204.5
Q ss_pred CCCCCCceeccccCeEEEEEEec------CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhc-CCCCceeEeeeecc-CCe
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ------NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSI-RHRNLTKIISSCSN-EDF 839 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~~~ 839 (1057)
++|++.++||+|+||.||+|... +++.||+|+++... ....+.+.+|++++.++ +||||++++++|.. +..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 46888999999999999999532 35789999986432 33446778899999999 79999999998754 467
Q ss_pred eEEEEEEccCCChhHHHhcCC-----------------------------------------------------------
Q 001544 840 KALILEYMRNGSLEKCLYSGN----------------------------------------------------------- 860 (1057)
Q Consensus 840 ~~lV~E~~~~gsL~~~l~~~~----------------------------------------------------------- 860 (1057)
.++||||+++++|.+++....
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 889999999999999885422
Q ss_pred -ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccccccccccccC
Q 001544 861 -YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATLGYMA 939 (1057)
Q Consensus 861 -~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~a 939 (1057)
..+++.++.+++.||++|++||| +.+|+||||||+||++++++.+||+|||+++.+.............++..|+|
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 243 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 243 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccC
Confidence 25789999999999999999999 99999999999999999999999999999987643332222333455678999
Q ss_pred ccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHH
Q 001544 940 PEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASS 1018 (1057)
Q Consensus 940 PE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1018 (1057)
||++.+..++.++||||+||++|||++ |..||......+ .. .+.+.... ....+..++++
T Consensus 244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~------------~~~~~~~~------~~~~~~~~~~~ 304 (337)
T cd05054 244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EF------------CRRLKEGT------RMRAPEYATPE 304 (337)
T ss_pred cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HH------------HHHHhccC------CCCCCccCCHH
Confidence 999999999999999999999999998 999986522111 01 01111000 00111234567
Q ss_pred HHHHHhHcccCCCCCCCCHHHHHHHHHHhHH
Q 001544 1019 VFNLAMECTVESPDERITAKEIVRRLLKIRD 1049 (1057)
Q Consensus 1019 l~~li~~cl~~dP~~Rps~~evl~~L~~i~~ 1049 (1057)
+.+++.+||+.+|++||++.|++++|+++.+
T Consensus 305 ~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 305 IYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 8999999999999999999999999998765
No 77
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.4e-36 Score=341.57 Aligned_cols=242 Identities=26% Similarity=0.375 Sum_probs=197.9
Q ss_pred ceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCC
Q 001544 775 NLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNG 850 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~g 850 (1057)
+.||+|+||.||+|... +|+.||||++.... ......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999854 68999999996532 334567888999999999999999999999999999999999999
Q ss_pred ChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcccccc
Q 001544 851 SLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ 930 (1057)
Q Consensus 851 sL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 930 (1057)
+|.+++.... .+++.++..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++..... ......
T Consensus 81 ~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~--~~~~~~ 154 (328)
T cd05593 81 ELFFHLSRER-VFSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD--AATMKT 154 (328)
T ss_pred CHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc--cccccc
Confidence 9998886654 5899999999999999999999 999999999999999999999999999998753211 122233
Q ss_pred ccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhH
Q 001544 931 TLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFA 1010 (1057)
Q Consensus 931 ~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1057)
..||+.|+|||++.+..++.++||||+||++|||++|+.||...... .. .+.+... ...
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~-----~~---------~~~~~~~-------~~~ 213 (328)
T cd05593 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KL---------FELILME-------DIK 213 (328)
T ss_pred ccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH-----HH---------HHHhccC-------Ccc
Confidence 56899999999999889999999999999999999999998652111 00 0100000 001
Q ss_pred HHHHHHHHHHHHHhHcccCCCCCCC-----CHHHHHHH
Q 001544 1011 AKEQCASSVFNLAMECTVESPDERI-----TAKEIVRR 1043 (1057)
Q Consensus 1011 ~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 1043 (1057)
.+..++.++.+++.+|++.||++|| ++.|+++|
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 214 FPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 1123567789999999999999997 89999877
No 78
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=3.6e-36 Score=330.92 Aligned_cols=260 Identities=22% Similarity=0.372 Sum_probs=206.2
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCc----EEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGI----EVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKAL 842 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 842 (1057)
.+|++.+.||+|+||+||+|.+. +++ .||+|.+.... .....++..|+..+++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 46788899999999999999864 344 47888775332 3345678888999999999999999999864 45678
Q ss_pred EEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCC
Q 001544 843 ILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 922 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 922 (1057)
|+||+++|+|.+++......+++..+..|+.||+.|++||| +++++||||||+||++++++.+|++|||.++.....
T Consensus 86 i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPD 162 (279)
T ss_pred EEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCccceeccCC
Confidence 99999999999999877667999999999999999999999 899999999999999999999999999999876433
Q ss_pred CCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhccc
Q 001544 923 DQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANL 1001 (1057)
Q Consensus 923 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1057)
..........++..|+|||...++.++.++||||||+++||+++ |+.||...... ...+.+....
T Consensus 163 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--------------~~~~~~~~~~ 228 (279)
T cd05111 163 DKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH--------------EVPDLLEKGE 228 (279)
T ss_pred CcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--------------HHHHHHHCCC
Confidence 32223334456778999999988899999999999999999998 99998652111 0111111111
Q ss_pred ccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHHHHh
Q 001544 1002 LITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRDFLL 1052 (1057)
Q Consensus 1002 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~ 1052 (1057)
. ...+..++.++.+++.+||..+|++||++.|+++.+..+.+.-+
T Consensus 229 ~------~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~~ 273 (279)
T cd05111 229 R------LAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDPP 273 (279)
T ss_pred c------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCCc
Confidence 0 01112245567889999999999999999999999998876433
No 79
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.9e-37 Score=303.27 Aligned_cols=253 Identities=26% Similarity=0.346 Sum_probs=207.3
Q ss_pred hCCCCCCceeccccCeEEEEEEe-cCCcEEEEEEeeccc--------hhHHHHHHHHHHHHHhc-CCCCceeEeeeeccC
Q 001544 768 TNGFSENNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQH--------ERAFKSFDTECEVMKSI-RHRNLTKIISSCSNE 837 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 837 (1057)
-+.|...+.+|.|..++|.++.. .+|..+|+|++.... ....++-.+|+.+++++ .||+|+++.++|+.+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 34677788999999999998864 478999999985321 12345566799999999 599999999999999
Q ss_pred CeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccc
Q 001544 838 DFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAK 917 (1057)
Q Consensus 838 ~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~ 917 (1057)
...++|+|.|+.|.|.|++.+.- .++++...+|++|+.+|++||| .+.|||||+||+|||++++..+||+|||+|+
T Consensus 96 sF~FlVFdl~prGELFDyLts~V-tlSEK~tR~iMrqlfegVeylH---a~~IVHRDLKpENILlddn~~i~isDFGFa~ 171 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSKV-TLSEKETRRIMRQLFEGVEYLH---ARNIVHRDLKPENILLDDNMNIKISDFGFAC 171 (411)
T ss_pred chhhhhhhhcccchHHHHhhhhe-eecHHHHHHHHHHHHHHHHHHH---HhhhhhcccChhheeeccccceEEeccceee
Confidence 99999999999999999997754 5999999999999999999999 9999999999999999999999999999999
Q ss_pred cccCCCCccccccccccccccCccccCC------CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccch
Q 001544 918 LLIGEDQSMTQTQTLATLGYMAPEYGRE------GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPI 991 (1057)
Q Consensus 918 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~------~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 991 (1057)
.+.+ .......+||++|.|||.+.- ..|+..+|.|+.||++|-++.|.+||..-.+ .
T Consensus 172 ~l~~---GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ--------------m 234 (411)
T KOG0599|consen 172 QLEP---GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ--------------M 234 (411)
T ss_pred ccCC---chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH--------------H
Confidence 8743 345566789999999998652 3477899999999999999999999854100 0
Q ss_pred hHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 992 SMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
-+...+-.. ...-+-+.+.+.+...++++.+|++.||.+|.|++|+++|=
T Consensus 235 lMLR~ImeG---kyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHp 284 (411)
T KOG0599|consen 235 LMLRMIMEG---KYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHP 284 (411)
T ss_pred HHHHHHHhc---ccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcCh
Confidence 111222111 11223345567888999999999999999999999999874
No 80
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.9e-36 Score=356.81 Aligned_cols=251 Identities=22% Similarity=0.292 Sum_probs=204.5
Q ss_pred CCCCCceeccccCeEEEEEEec-C-CcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-N-GIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
.|...+.||+|+||.||+|... + ++.||+|.+..........+.+|+++++.++||||+++++++..++..|+||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 4888899999999999999744 3 6789999876655566677888999999999999999999999999999999999
Q ss_pred cCCChhHHHhcC---CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 848 RNGSLEKCLYSG---NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 848 ~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
++|+|.+++... ..++++.++..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999999887542 346889999999999999999999 99999999999999999999999999999987643222
Q ss_pred ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccc
Q 001544 925 SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLIT 1004 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1057)
........||++|+|||++.+..++.++||||+||++|||++|+.||...... .. .........
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~-----~~--------~~~~~~~~~--- 288 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR-----EI--------MQQVLYGKY--- 288 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-----HH--------HHHHHhCCC---
Confidence 22233456899999999999889999999999999999999999998652111 00 001110000
Q ss_pred cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1005 EDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.+.+..++.++.+++.+||..||++||++.+++.+
T Consensus 289 ----~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 289 ----DPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred ----CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 01112356778999999999999999999999764
No 81
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=338.59 Aligned_cols=242 Identities=22% Similarity=0.323 Sum_probs=201.4
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCCeeEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSI-RHRNLTKIISSCSNEDFKAL 842 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 842 (1057)
.++|...++||+|+||+|++|..+ +++.+|||++++.. +...+..+.|.+++... +||.+++++.+|...++.|+
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 457899999999999999999865 68899999997653 44567778888888877 59999999999999999999
Q ss_pred EEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCC
Q 001544 843 ILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 922 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 922 (1057)
||||+.||++..+.+. ..+++..+.-++..|+.||+||| +++|||||||.+|||+|.+|++||+|||+++.-..
T Consensus 447 vmey~~Ggdm~~~~~~--~~F~e~rarfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~- 520 (694)
T KOG0694|consen 447 VMEYVAGGDLMHHIHT--DVFSEPRARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMG- 520 (694)
T ss_pred EEEecCCCcEEEEEec--ccccHHHHHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCcEEecccccccccCC-
Confidence 9999999995544433 45999999999999999999999 99999999999999999999999999999986432
Q ss_pred CCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccc
Q 001544 923 DQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLL 1002 (1057)
Q Consensus 923 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1057)
.........||+.|||||++.+..|+..+|-|||||++|||+.|+.||.+..+ .+++|....
T Consensus 521 -~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddE-----------------ee~FdsI~~ 582 (694)
T KOG0694|consen 521 -QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDE-----------------EEVFDSIVN 582 (694)
T ss_pred -CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCH-----------------HHHHHHHhc
Confidence 22355567899999999999999999999999999999999999999975211 122222221
Q ss_pred cccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCH
Q 001544 1003 ITEDKHFAAKEQCASSVFNLAMECTVESPDERITA 1037 (1057)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 1037 (1057)
.+. ..+..++.+..+++++++..+|++|..+
T Consensus 583 d~~----~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 583 DEV----RYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred CCC----CCCCcccHHHHHHHHHHhccCcccccCC
Confidence 111 1224567889999999999999999955
No 82
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=4e-36 Score=325.56 Aligned_cols=248 Identities=27% Similarity=0.447 Sum_probs=199.3
Q ss_pred ceeccccCeEEEEEEec-CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCCCh
Q 001544 775 NLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNGSL 852 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL 852 (1057)
+.||+|+||.||+|+.. +++.||+|.+.... ......+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 46999999999999864 68999999875433 34457789999999999999999999999999999999999999999
Q ss_pred hHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcccccccc
Q 001544 853 EKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL 932 (1057)
Q Consensus 853 ~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 932 (1057)
.+++......+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+|++|||++................
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 157 (252)
T cd05084 81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQ 157 (252)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCC
Confidence 9999776666899999999999999999999 9999999999999999999999999999987643211111111122
Q ss_pred ccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHH
Q 001544 933 ATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAA 1011 (1057)
Q Consensus 933 ~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1057)
.+..|+|||.+.++.++.++||||+|+++|||++ |..||...... .....+.... ....
T Consensus 158 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--------------~~~~~~~~~~------~~~~ 217 (252)
T cd05084 158 IPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ--------------QTREAIEQGV------RLPC 217 (252)
T ss_pred CceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH--------------HHHHHHHcCC------CCCC
Confidence 3457999999988889999999999999999998 88887542111 0111111110 0111
Q ss_pred HHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHH
Q 001544 1012 KEQCASSVFNLAMECTVESPDERITAKEIVRRLL 1045 (1057)
Q Consensus 1012 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1045 (1057)
+..++..+.+++.+|++.+|++||++.|+.+.|+
T Consensus 218 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 218 PELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 2345678899999999999999999999999886
No 83
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.2e-36 Score=340.09 Aligned_cols=240 Identities=25% Similarity=0.305 Sum_probs=195.3
Q ss_pred eccccCeEEEEEEec-CCcEEEEEEeecc---chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCCCh
Q 001544 777 IGRGSFGSVYIARLQ-NGIEVAVKTFDLQ---HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNGSL 852 (1057)
Q Consensus 777 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL 852 (1057)
||+|+||+||+|+.. +++.||+|+++.. .......+.+|++++++++||||+++++++.+++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999865 5889999998643 233456778899999999999999999999999999999999999999
Q ss_pred hHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcccccccc
Q 001544 853 EKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL 932 (1057)
Q Consensus 853 ~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 932 (1057)
.+++.... .+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++..... ........
T Consensus 81 ~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~ 154 (312)
T cd05585 81 FHHLQREG-RFDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD--DDKTNTFC 154 (312)
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccC--CCcccccc
Confidence 99987654 4899999999999999999999 999999999999999999999999999998754221 12233456
Q ss_pred ccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHHH
Q 001544 933 ATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAK 1012 (1057)
Q Consensus 933 ~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1057)
||+.|+|||++.+..++.++||||+||++|||++|+.||..... .... ...... ....+
T Consensus 155 gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~-----~~~~--------~~~~~~--------~~~~~ 213 (312)
T cd05585 155 GTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV-----NEMY--------RKILQE--------PLRFP 213 (312)
T ss_pred CCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH-----HHHH--------HHHHcC--------CCCCC
Confidence 89999999999998999999999999999999999999865211 1110 011100 01111
Q ss_pred HHHHHHHHHHHhHcccCCCCCCC---CHHHHHHH
Q 001544 1013 EQCASSVFNLAMECTVESPDERI---TAKEIVRR 1043 (1057)
Q Consensus 1013 ~~~~~~l~~li~~cl~~dP~~Rp---s~~evl~~ 1043 (1057)
..+++++.+++.+||+.||++|| ++.|++.|
T Consensus 214 ~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 214 DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 34567789999999999999997 46777765
No 84
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.4e-36 Score=331.15 Aligned_cols=256 Identities=29% Similarity=0.504 Sum_probs=211.3
Q ss_pred HhCCCCCCceeccccCeEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
...+|+..++||+|+||.||+|...++..||+|++.........++.+|++++++++||||+++++++.+.+..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 34568889999999999999999888999999999776665667899999999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 847 MRNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
+++++|.+++.... ..+++.++..++.|++.|++||| +.+|+||||||+||++++++.+||+|||.+.......
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~-- 158 (261)
T cd05148 84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV-- 158 (261)
T ss_pred cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccchhhcCCcc--
Confidence 99999999997643 45899999999999999999999 8999999999999999999999999999997653221
Q ss_pred cccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccccc
Q 001544 926 MTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLIT 1004 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1057)
.......++..|+|||......++.++||||||+++|+|++ |+.||......+ ....+...
T Consensus 159 ~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~--------------~~~~~~~~---- 220 (261)
T cd05148 159 YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE--------------VYDQITAG---- 220 (261)
T ss_pred ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH--------------HHHHHHhC----
Confidence 11223345678999999988889999999999999999998 888986522110 00111100
Q ss_pred cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHh
Q 001544 1005 EDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKI 1047 (1057)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 1047 (1057)
.+.+.+..++.++.+++.+||+.||++|||++++.+.|+.+
T Consensus 221 --~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 221 --YRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred --CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 01112234567889999999999999999999999999864
No 85
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=3.5e-36 Score=333.26 Aligned_cols=259 Identities=27% Similarity=0.488 Sum_probs=209.8
Q ss_pred CCCCCCceeccccCeEEEEEEec------CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ------NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKAL 842 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 842 (1057)
.+|...+.||+|+||.||+|... ++..||+|.++.......+.+.+|++++++++||||+++++++.+.+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 35777899999999999999742 356799999876665666789999999999999999999999999999999
Q ss_pred EEEEccCCChhHHHhcCC---------------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc
Q 001544 843 ILEYMRNGSLEKCLYSGN---------------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMV 907 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 907 (1057)
||||+++++|.+++.... ..+++.+++.++.|++.|++||| +++|+||||||+||+++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCc
Confidence 999999999999986532 34789999999999999999999 999999999999999999999
Q ss_pred EEEEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhh
Q 001544 908 AHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVN 986 (1057)
Q Consensus 908 ~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~ 986 (1057)
++|+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |+.||......+
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-------- 233 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE-------- 233 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--------
Confidence 99999999976533222222334456788999999988899999999999999999999 999976522111
Q ss_pred hccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHHH
Q 001544 987 DFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRDF 1050 (1057)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 1050 (1057)
..+.+..... ......++..+.+++.+||+.+|++||++.++++.|+++...
T Consensus 234 ------~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 234 ------VIECITQGRV------LERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred ------HHHHHhCCCC------CCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 0010100000 001123466789999999999999999999999999999765
No 86
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.8e-36 Score=341.45 Aligned_cols=246 Identities=22% Similarity=0.287 Sum_probs=201.8
Q ss_pred hCCCCCCceeccccCeEEEEEEecC--CcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQN--GIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKAL 842 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 842 (1057)
.++|++.+.||+|+||.||+|...+ +..||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 3468889999999999999997543 3689999986432 2345678899999999999999999999999999999
Q ss_pred EEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCC
Q 001544 843 ILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 922 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 922 (1057)
||||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 109 v~Ey~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~- 183 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNK-RFPNDVGCFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT- 183 (340)
T ss_pred EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC-
Confidence 999999999999987654 5899999999999999999999 99999999999999999999999999999986522
Q ss_pred CCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccc
Q 001544 923 DQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLL 1002 (1057)
Q Consensus 923 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1057)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .. ...+.....
T Consensus 184 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~----~~---------~~~i~~~~~- 245 (340)
T PTZ00426 184 ----RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL----LI---------YQKILEGII- 245 (340)
T ss_pred ----CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH----HH---------HHHHhcCCC-
Confidence 122346899999999998888999999999999999999999998652110 00 011111110
Q ss_pred cccchhhHHHHHHHHHHHHHHhHcccCCCCCCC-----CHHHHHHH
Q 001544 1003 ITEDKHFAAKEQCASSVFNLAMECTVESPDERI-----TAKEIVRR 1043 (1057)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 1043 (1057)
..+...+..+.+++.+|++.||++|+ +++|+++|
T Consensus 246 -------~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 246 -------YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred -------CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 01123456788999999999999995 89999887
No 87
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=2.3e-36 Score=333.04 Aligned_cols=255 Identities=30% Similarity=0.515 Sum_probs=206.1
Q ss_pred CCCCCCceeccccCeEEEEEEec------CCcEEEEEEeeccchh-HHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ------NGIEVAVKTFDLQHER-AFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKA 841 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 841 (1057)
.+|.+.+.||+|+||.||+|... +++.||||.++..... ..+.+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 45778899999999999999753 3578999999655433 5678999999999999999999999999999999
Q ss_pred EEEEEccCCChhHHHhcCC-------------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcE
Q 001544 842 LILEYMRNGSLEKCLYSGN-------------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVA 908 (1057)
Q Consensus 842 lV~E~~~~gsL~~~l~~~~-------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 908 (1057)
+||||+++++|.+++...+ ..+++.++..++.|++.|++||| +.+++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeeccccccceEEEcCCCeE
Confidence 9999999999999986542 34788899999999999999999 9999999999999999999999
Q ss_pred EEEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhh
Q 001544 909 HLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVND 987 (1057)
Q Consensus 909 kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 987 (1057)
|++|||.++...............++..|+|||++.+..++.++||||+||++|||++ |..||......+
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~--------- 232 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE--------- 232 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH---------
Confidence 9999999976533222222233445778999999999999999999999999999998 999986522111
Q ss_pred ccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHH
Q 001544 988 FLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLK 1046 (1057)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1046 (1057)
..+.+..... ...+..++.++.+++.+||..+|++||++.|+++.|++
T Consensus 233 -----~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 233 -----VIECITQGRL------LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred -----HHHHHHcCCc------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 0111111000 01112356778999999999999999999999998863
No 88
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2.1e-36 Score=328.30 Aligned_cols=252 Identities=24% Similarity=0.415 Sum_probs=203.6
Q ss_pred CCCCCCceeccccCeEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEcc
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMR 848 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 848 (1057)
++|++.+.||+|+||+||+|+..++..||||.+.... .....+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 3577889999999999999988877789999986433 234678899999999999999999999998889999999999
Q ss_pred CCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcccc
Q 001544 849 NGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQ 928 (1057)
Q Consensus 849 ~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 928 (1057)
+|+|.+++......+++.+++.++.||+.|++||| +.+++|+||||+||+++.++.+||+|||.++...... ....
T Consensus 83 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~-~~~~ 158 (256)
T cd05113 83 NGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE-YTSS 158 (256)
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCccceecCCCc-eeec
Confidence 99999999876657899999999999999999999 9999999999999999999999999999987653221 1122
Q ss_pred ccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccccccch
Q 001544 929 TQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDK 1007 (1057)
Q Consensus 929 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1057)
....++..|+|||...+..++.++||||||+++|||++ |+.||......+ ..+.+.....
T Consensus 159 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--------------~~~~~~~~~~----- 219 (256)
T cd05113 159 VGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE--------------TVEKVSQGLR----- 219 (256)
T ss_pred CCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--------------HHHHHhcCCC-----
Confidence 22345678999999988889999999999999999999 999986422110 0011100000
Q ss_pred hhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHH
Q 001544 1008 HFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLL 1045 (1057)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1045 (1057)
...+...+..+.+++.+||+.+|++||++.++++.++
T Consensus 220 -~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 220 -LYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred -CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 0001123567899999999999999999999998763
No 89
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-38 Score=315.10 Aligned_cols=250 Identities=26% Similarity=0.382 Sum_probs=214.1
Q ss_pred CCCCCceeccccCeEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEcc
Q 001544 770 GFSENNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMR 848 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 848 (1057)
-|.++++||+|+||+||+|.. .+|+.||||.+.. +...+++.+|+.+|++++.|++|+++|.|-.....++|||||.
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 366778999999999999964 4799999999754 3456888999999999999999999998888888899999999
Q ss_pred CCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcccc
Q 001544 849 NGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQ 928 (1057)
Q Consensus 849 ~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 928 (1057)
.|+..+.++.+++++++.++..|++.-++||+||| ..+-+|||||+.|||++.+|.+|++|||.|..+.. .-...
T Consensus 112 AGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD--TMAKR 186 (502)
T KOG0574|consen 112 AGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTD--TMAKR 186 (502)
T ss_pred CCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchhhh--hHHhh
Confidence 99999999999999999999999999999999999 78889999999999999999999999999987632 22234
Q ss_pred ccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchh
Q 001544 929 TQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKH 1008 (1057)
Q Consensus 929 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1057)
...+||+.|||||++..-.|..++|+||+|++..||..|++||.+...-.. ++ .....+.+.
T Consensus 187 NTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA----------------IF--MIPT~PPPT 248 (502)
T KOG0574|consen 187 NTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRA----------------IF--MIPTKPPPT 248 (502)
T ss_pred CccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccce----------------eE--eccCCCCCC
Confidence 456899999999999998999999999999999999999999987433211 00 011223334
Q ss_pred hHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 1009 FAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
+..++..+.++.+++++|+-..|++|.|+.++++|-
T Consensus 249 F~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~ 284 (502)
T KOG0574|consen 249 FKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHT 284 (502)
T ss_pred CCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhh
Confidence 556678889999999999999999999999999874
No 90
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=5.5e-36 Score=337.47 Aligned_cols=267 Identities=21% Similarity=0.330 Sum_probs=204.1
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc-chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ-HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
.++|++.+.||+|+||.||+|... ++..||+|.+... .......+.+|++++++++||||++++++|.+++..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 367999999999999999999865 6889999998654 33445778999999999999999999999999999999999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCC-CCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYS-APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
|+++|+|.+++.... .+++..+..++.|++.|++||| + .+|+||||||+||++++++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH---~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-- 157 (333)
T cd06650 84 HMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 157 (333)
T ss_pred cCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh--
Confidence 999999999987654 4889999999999999999999 6 47999999999999999999999999998754221
Q ss_pred ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccch-------hhhhhhc---------
Q 001544 925 SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTL-------KHWVNDF--------- 988 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~-------~~~~~~~--------- 988 (1057)
......++..|+|||.+.+..++.++||||+||++|||++|+.||......+... ..+....
T Consensus 158 --~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (333)
T cd06650 158 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPG 235 (333)
T ss_pred --ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCcc
Confidence 1223468899999999998889999999999999999999999987532211100 0000000
Q ss_pred ------cc-----hhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 989 ------LP-----ISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 989 ------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
.+ .......+..... ...... ....+.++.+++.+||+.||++|||+.|+++|-
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~ 300 (333)
T cd06650 236 RPLSSYGPDSRPPMAIFELLDYIVNE-PPPKLP-SGVFGAEFQDFVNKCLIKNPAERADLKQLMVHA 300 (333)
T ss_pred chhhhhcccccccccHHHHHHHHhcC-CCccCC-CCCcCHHHHHHHHHhccCCcccCcCHHHHhhCH
Confidence 00 0000000000000 000000 012356789999999999999999999998763
No 91
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=5.5e-36 Score=330.43 Aligned_cols=255 Identities=26% Similarity=0.476 Sum_probs=204.6
Q ss_pred CCCCCCceeccccCeEEEEEEe-----cCCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARL-----QNGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKAL 842 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 842 (1057)
.+|++.+.||+|+||+||+|.. .++..||+|.+.... ......+.+|++++++++||||+++++++..++..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 3577889999999999999974 246889999986433 3445778999999999999999999999999999999
Q ss_pred EEEEccCCChhHHHhcCC----------------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC
Q 001544 843 ILEYMRNGSLEKCLYSGN----------------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM 906 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~~----------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~ 906 (1057)
||||+++++|.+++.... ..+++.++..++.|++.|++||| +++++||||||+||++++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hcCeehhccccceEEEcCCC
Confidence 999999999999985321 24788899999999999999999 89999999999999999999
Q ss_pred cEEEEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhh
Q 001544 907 VAHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWV 985 (1057)
Q Consensus 907 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~ 985 (1057)
.+|++|||+++...............++..|+|||+..+..++.++||||||+++|||++ |..||.....
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~--------- 232 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN--------- 232 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH---------
Confidence 999999999986543332222333445678999999988889999999999999999999 8888754211
Q ss_pred hhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHH
Q 001544 986 NDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLK 1046 (1057)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1046 (1057)
....+.++.... .+.+..++.++.+++.+|++.||++||++.++.++++.
T Consensus 233 -----~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 233 -----QEVIEMVRKRQL------LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred -----HHHHHHHHcCCc------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 011111111110 11123456788999999999999999999999998864
No 92
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=9.2e-36 Score=325.77 Aligned_cols=258 Identities=24% Similarity=0.341 Sum_probs=207.9
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc---chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ---HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
++|++.+.||+|+||.||+|+.. +++.||||.++.. ......++.+|++++++++||||+++++++.+.+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 47889999999999999999854 7899999987542 2344567889999999999999999999999999999999
Q ss_pred EEccCCChhHHHhc---CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccC
Q 001544 845 EYMRNGSLEKCLYS---GNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIG 921 (1057)
Q Consensus 845 E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 921 (1057)
||+++|+|.+++.. ....+++.++..++.|+++|++||| +.+++||||||+||+++.++.++++|||.+..+..
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999988753 2345889999999999999999999 99999999999999999999999999999886532
Q ss_pred CCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccc
Q 001544 922 EDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANL 1001 (1057)
Q Consensus 922 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1057)
.. .......++..|+|||...+..++.++|+||+|+++|||++|+.||...... ...+. ..+....
T Consensus 159 ~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~---~~~~~---------~~~~~~~ 224 (267)
T cd08228 159 KT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LFSLC---------QKIEQCD 224 (267)
T ss_pred hh--HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc---HHHHH---------HHHhcCC
Confidence 21 1222345788999999998888999999999999999999999998542111 11111 1111100
Q ss_pred ccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhH
Q 001544 1002 LITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIR 1048 (1057)
Q Consensus 1002 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~ 1048 (1057)
. ........+..+.+++.+||..+|++||++.|+++.+++++
T Consensus 225 ~-----~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 225 Y-----PPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred C-----CCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 0 00011245677899999999999999999999999999874
No 93
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=4.4e-36 Score=327.00 Aligned_cols=255 Identities=29% Similarity=0.479 Sum_probs=206.6
Q ss_pred hCCCCCCceeccccCeEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
.++|++.+.||+|++|.||+|...+++.||||.++... ...+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 35688889999999999999998778899999986543 23467889999999999999999999999999999999999
Q ss_pred cCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 848 RNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 848 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
++++|.+++.... ..+++.++..++.|++.|++||| +.+|+||||||+||++++++.+||+|||+++...... ..
T Consensus 84 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-~~ 159 (261)
T cd05068 84 KYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDI-YE 159 (261)
T ss_pred cCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCc-cc
Confidence 9999999987644 56899999999999999999999 8999999999999999999999999999998763211 11
Q ss_pred ccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhccccccc
Q 001544 927 TQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITE 1005 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1057)
.......+..|+|||+..+..++.++||||||+++|||++ |+.||...... .....++...
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------------~~~~~~~~~~---- 221 (261)
T cd05068 160 AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA--------------EVLQQVDQGY---- 221 (261)
T ss_pred ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH--------------HHHHHHHcCC----
Confidence 1111223457999999988899999999999999999999 99888652111 0111111110
Q ss_pred chhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHh
Q 001544 1006 DKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKI 1047 (1057)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 1047 (1057)
..+....++..+.+++.+|++.+|++||++.++.+.|+++
T Consensus 222 --~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 222 --RMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred --CCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 0111124567789999999999999999999999999863
No 94
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=6.7e-36 Score=330.03 Aligned_cols=268 Identities=25% Similarity=0.429 Sum_probs=207.2
Q ss_pred CCCCCCceeccccCeEEEEEEe-----cCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeecc--CCeeE
Q 001544 769 NGFSENNLIGRGSFGSVYIARL-----QNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSN--EDFKA 841 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~ 841 (1057)
.+|++.+.||+|+||+||+|.. .++..||||++........+.+.+|++++++++||||+++++++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 4688889999999999999974 2578999999977666667889999999999999999999998643 45688
Q ss_pred EEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccC
Q 001544 842 LILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIG 921 (1057)
Q Consensus 842 lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 921 (1057)
+||||+++|+|.+++...+..+++..+..++.|++.||+||| +++|+||||||+||++++++.+||+|||+++....
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~ 160 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQ 160 (284)
T ss_pred EEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHhhEEECCCCeEEECCCcccccccC
Confidence 999999999999999876667899999999999999999999 99999999999999999999999999999987633
Q ss_pred CCCcccc-ccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccc-----hhHHH
Q 001544 922 EDQSMTQ-TQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLP-----ISMMK 995 (1057)
Q Consensus 922 ~~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~-----~~~~~ 995 (1057)
....... ....++..|+|||...+..++.++||||+||++|||++|..|+...... .......... ....+
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05081 161 DKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE---FMRMMGNDKQGQMIVYHLIE 237 (284)
T ss_pred CCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh---hhhhcccccccccchHHHHH
Confidence 2221111 1122344699999998888999999999999999999998775432110 0000000000 00111
Q ss_pred hhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhH
Q 001544 996 IIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIR 1048 (1057)
Q Consensus 996 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~ 1048 (1057)
.... ....+....++.++.+++.+||+.+|++|||+.|+++.|+.++
T Consensus 238 ~~~~------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 238 LLKN------NGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred HHhc------CCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 1111 1111122345678999999999999999999999999998763
No 95
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.4e-36 Score=342.08 Aligned_cols=264 Identities=20% Similarity=0.217 Sum_probs=200.0
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
..+|++.+.||+|+||.||+|... +++.||+|... ...+.+|++++++++||||+++++++......++|+|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 357999999999999999999754 68999999753 23467899999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 847 MRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
+. ++|.+++.... .+++.+++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 165 ~~-~~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~-~~ 238 (391)
T PHA03212 165 YK-TDLYCYLAAKR-NIAICDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN-AN 238 (391)
T ss_pred CC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeCCccccccccc-cc
Confidence 95 68888876544 4889999999999999999999 8999999999999999999999999999997542211 12
Q ss_pred ccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCccccc--c----cchhhhhhhcc------ch---
Q 001544 927 TQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSG--E----MTLKHWVNDFL------PI--- 991 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~--~----~~~~~~~~~~~------~~--- 991 (1057)
......||+.|+|||++.+..++.++||||+||++|||++|+.||-..... . ..+...+.... +.
T Consensus 239 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~ 318 (391)
T PHA03212 239 KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQ 318 (391)
T ss_pred ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchh
Confidence 223457899999999998889999999999999999999999886432111 0 01111100000 00
Q ss_pred -hHHHhh---hcccc--cccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 992 -SMMKII---DANLL--ITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 992 -~~~~~~---~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.....+ ..... ......+......+.++.+++.+|++.||++|||++|+++|
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 319 ANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 000000 00000 00111122223457789999999999999999999999975
No 96
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=3.1e-36 Score=331.29 Aligned_cols=257 Identities=24% Similarity=0.403 Sum_probs=203.3
Q ss_pred HhCCCCCCceeccccCeEEEEEEec------CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCe
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARLQ------NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDF 839 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 839 (1057)
..++|+..+.||+|+||.||+|... .+..||||++.... .....++.+|+.++++++||||+++++++.+...
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 3567899999999999999999743 35679999985432 3345678899999999999999999999999999
Q ss_pred eEEEEEEccCCChhHHHhcCC---------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEE
Q 001544 840 KALILEYMRNGSLEKCLYSGN---------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHL 910 (1057)
Q Consensus 840 ~~lV~E~~~~gsL~~~l~~~~---------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 910 (1057)
.++||||+++|+|.+++.... ...++.++..++.|+++|++||| +.+++||||||+||++++++.+++
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCcchheEEEcCCCCEEE
Confidence 999999999999999986532 23678889999999999999999 899999999999999999999999
Q ss_pred EcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhcc
Q 001544 911 SDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFL 989 (1057)
Q Consensus 911 ~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 989 (1057)
+|||+++...............++..|+|||++.++.++.++|||||||++|||++ |..||...... .
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~-----~------ 229 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE-----Q------ 229 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-----H------
Confidence 99999876533222222222345678999999988889999999999999999999 67887542111 1
Q ss_pred chhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHH
Q 001544 990 PISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLK 1046 (1057)
Q Consensus 990 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1046 (1057)
..+.+..... ...+..++..+.+++.+|++.+|++||++.|+++++++
T Consensus 230 ---~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 230 ---VLRFVMEGGL------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred ---HHHHHHcCCc------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 0111000000 00112346678999999999999999999999998863
No 97
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=9.8e-37 Score=344.04 Aligned_cols=253 Identities=23% Similarity=0.330 Sum_probs=204.1
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
++|++.+.||+|+||+||+|... +|+.||||+++... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36888999999999999999865 68999999997542 234567889999999999999999999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~ 157 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM 157 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc
Confidence 999999999999877667999999999999999999999 99999999999999999999999999999986532221
Q ss_pred ccccccccccccccCccccC------CCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhh
Q 001544 925 SMTQTQTLATLGYMAPEYGR------EGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIID 998 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~------~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1057)
.......||+.|+|||++. ...++.++||||+||++|||++|+.||......+ . ...+..
T Consensus 158 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~-----~--------~~~i~~ 223 (330)
T cd05601 158 -VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK-----T--------YNNIMN 223 (330)
T ss_pred -eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH-----H--------HHHHHc
Confidence 1223346899999999876 4567899999999999999999999986521110 0 011111
Q ss_pred cccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 999 ANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
... ....+....++.++.+++.+|+. +|++||++.++++|
T Consensus 224 ~~~----~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 224 FQR----FLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred CCC----ccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 000 00111112356778999999998 99999999999876
No 98
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=4.9e-36 Score=327.05 Aligned_cols=254 Identities=28% Similarity=0.456 Sum_probs=205.1
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
.+|++.+.||+|+||.||+|... +++.||+|++.... ...+.+.+|++++++++||||+++++++..++..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 35777899999999999999865 58899999986443 33567889999999999999999999999999999999999
Q ss_pred cCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 848 RNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 848 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
++++|.+++.... ..+++..+..++.|+++|++||| +.+++||||||+||++++++.+||+|||.+........ .
T Consensus 85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~-~ 160 (263)
T cd05052 85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-T 160 (263)
T ss_pred CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCCcccccccccee-e
Confidence 9999999987543 45899999999999999999999 89999999999999999999999999999986532211 1
Q ss_pred ccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhccccccc
Q 001544 927 TQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITE 1005 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1057)
......++.+|+|||...+..++.++|||||||++|||++ |..||..... ..+ .+.+....
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-----~~~---------~~~~~~~~---- 222 (263)
T cd05052 161 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQV---------YELLEKGY---- 222 (263)
T ss_pred ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHH---------HHHHHCCC----
Confidence 1112233568999999988899999999999999999998 8888754211 110 11111110
Q ss_pred chhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHh
Q 001544 1006 DKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKI 1047 (1057)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 1047 (1057)
....++.++.++.+++.+||+.+|++||++.|+++.|+.+
T Consensus 223 --~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 223 --RMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred --CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 0111234567899999999999999999999999999875
No 99
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=4.1e-36 Score=326.16 Aligned_cols=250 Identities=28% Similarity=0.462 Sum_probs=202.2
Q ss_pred CCCCCceeccccCeEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccC
Q 001544 770 GFSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRN 849 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 849 (1057)
+|++.+.||+|+||.||+|..+++..+|+|.+..... ....+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 5778899999999999999988778899999864322 235678899999999999999999999999999999999999
Q ss_pred CChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccc
Q 001544 850 GSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQT 929 (1057)
Q Consensus 850 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 929 (1057)
++|.+++......+++..+..++.|+++|++||| +.+++||||||+||++++++.+|++|||.++...... .....
T Consensus 84 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~-~~~~~ 159 (256)
T cd05059 84 GCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ-YTSSQ 159 (256)
T ss_pred CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCcccceeccccc-ccccC
Confidence 9999999876667899999999999999999999 9999999999999999999999999999987653211 11111
Q ss_pred cccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchh
Q 001544 930 QTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKH 1008 (1057)
Q Consensus 930 ~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1057)
...++..|+|||...+..++.++||||||+++||+++ |+.||......+ ..+.+.... .
T Consensus 160 ~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--------------~~~~~~~~~------~ 219 (256)
T cd05059 160 GTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE--------------VVESVSAGY------R 219 (256)
T ss_pred CCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH--------------HHHHHHcCC------c
Confidence 2223457999999988899999999999999999999 788886421111 001111100 0
Q ss_pred hHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 1009 FAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
...+..++.++.+++.+||+.+|++||++.|+++.|
T Consensus 220 ~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 220 LYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 011123567899999999999999999999999876
No 100
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.1e-36 Score=346.32 Aligned_cols=253 Identities=23% Similarity=0.347 Sum_probs=201.7
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
++|++.+.||+|+||+||+|+.. +|+.||||+++... ......+.+|+++++.++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 46889999999999999999865 68999999996532 334567888999999999999999999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 81 E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 156 (364)
T cd05599 81 EYLPGGDMMTLLMKKD-TFTEEETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHR 156 (364)
T ss_pred CCCCCcHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeecccceecccccc
Confidence 9999999999987654 5899999999999999999999 99999999999999999999999999999875422110
Q ss_pred cc------------------------------------ccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCC
Q 001544 925 SM------------------------------------TQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRR 968 (1057)
Q Consensus 925 ~~------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~ 968 (1057)
.. ......||+.|+|||++....++.++||||+||++|||++|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~ 236 (364)
T cd05599 157 TEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGY 236 (364)
T ss_pred ccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCC
Confidence 00 011235899999999998889999999999999999999999
Q ss_pred CCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCC---HHHHHHH
Q 001544 969 KPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERIT---AKEIVRR 1043 (1057)
Q Consensus 969 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps---~~evl~~ 1043 (1057)
.||......+. ...+.... .....+....+++++.+++.+|+. +|.+|++ +.|+++|
T Consensus 237 ~Pf~~~~~~~~-------------~~~i~~~~----~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 237 PPFCSDNPQET-------------YRKIINWK----ETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCCCCCHHHH-------------HHHHHcCC----CccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 99865221100 00111000 000001111346678899999996 9999998 9999886
No 101
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=9.3e-36 Score=328.64 Aligned_cols=266 Identities=25% Similarity=0.387 Sum_probs=204.2
Q ss_pred CCCceeccccCeEEEEEEe-----cCCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeecc--CCeeEEE
Q 001544 772 SENNLIGRGSFGSVYIARL-----QNGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSN--EDFKALI 843 (1057)
Q Consensus 772 ~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lV 843 (1057)
+..+.||+|+||+||++.. .++..||+|+++... ......+.+|++++++++||||+++++++.. ....++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 7889999999999988653 357899999986543 2345678899999999999999999998765 3467899
Q ss_pred EEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC
Q 001544 844 LEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 923 (1057)
|||+++++|.+++.... +++.++..++.|++.|++||| +.+|+||||||+||++++++.+|++|||+++......
T Consensus 87 ~e~~~~~~l~~~~~~~~--l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 161 (283)
T cd05080 87 MEYVPLGSLRDYLPKHK--LNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 161 (283)
T ss_pred ecCCCCCCHHHHHHHcC--CCHHHHHHHHHHHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeecccccccCCcc
Confidence 99999999999987643 899999999999999999999 9999999999999999999999999999998653222
Q ss_pred Ccc-ccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhc-cchhHHHhhhccc
Q 001544 924 QSM-TQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDF-LPISMMKIIDANL 1001 (1057)
Q Consensus 924 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 1001 (1057)
... ......++..|+|||...+..++.++||||||+++|||++|+.||............+.... ......+..+...
T Consensus 162 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (283)
T cd05080 162 EYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGM 241 (283)
T ss_pred hhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCC
Confidence 111 11223355679999999888899999999999999999999999865322111111111000 0001111111111
Q ss_pred ccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhH
Q 001544 1002 LITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIR 1048 (1057)
Q Consensus 1002 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~ 1048 (1057)
..+.+..++.++.+++.+||+.+|++||+++++++.|++++
T Consensus 242 ------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 242 ------RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred ------CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 11122345678999999999999999999999999999875
No 102
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=5.4e-36 Score=342.11 Aligned_cols=254 Identities=22% Similarity=0.292 Sum_probs=197.7
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
++|+..+.||+|+||+||+|... +++.||||+++... ......+.+|++++.+++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 46888999999999999999754 68999999996532 233467888999999999999999999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
||+++|+|.+++...+ .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 81 E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~ 156 (363)
T cd05628 81 EFLPGGDMMTLLMKKD-TLTEEETQFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHR 156 (363)
T ss_pred cCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEeeccCccccccccc
Confidence 9999999999987654 5899999999999999999999 99999999999999999999999999999875432110
Q ss_pred c---------------------------------cccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCC
Q 001544 925 S---------------------------------MTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPT 971 (1057)
Q Consensus 925 ~---------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~ 971 (1057)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf 236 (363)
T cd05628 157 TEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (363)
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCC
Confidence 0 0012346899999999999889999999999999999999999998
Q ss_pred CcccccccchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHccc--CCCCCCCCHHHHHHH
Q 001544 972 DEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTV--ESPDERITAKEIVRR 1043 (1057)
Q Consensus 972 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~--~dP~~Rps~~evl~~ 1043 (1057)
......+ . ...+..... ...++....++.++.+++.+++. .++..||++.|+++|
T Consensus 237 ~~~~~~~----~---------~~~i~~~~~----~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 237 CSETPQE----T---------YKKVMNWKE----TLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCCCHHH----H---------HHHHHcCcC----cccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 6521111 0 001110000 00011111245667788887554 233356899999987
No 103
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=4.4e-36 Score=344.96 Aligned_cols=253 Identities=21% Similarity=0.301 Sum_probs=199.0
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
.|+..+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5788899999999999999754 68999999996532 3345678899999999999999999999999999999999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC-
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ- 924 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~- 924 (1057)
|+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 82 ~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~ 157 (381)
T cd05626 82 YIPGGDMMSLLIRME-VFPEVLARFYIAELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNS 157 (381)
T ss_pred cCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccc
Confidence 999999999987654 4889999999999999999999 99999999999999999999999999999754311000
Q ss_pred --------------------------------------------ccccccccccccccCccccCCCCCCccchHHHHHHH
Q 001544 925 --------------------------------------------SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGIL 960 (1057)
Q Consensus 925 --------------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~i 960 (1057)
........||+.|+|||++.+..++.++||||+||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~i 237 (381)
T cd05626 158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVI 237 (381)
T ss_pred ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhH
Confidence 000112468999999999988889999999999999
Q ss_pred HHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhH--cccCCCCCCCCHH
Q 001544 961 LMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAME--CTVESPDERITAK 1038 (1057)
Q Consensus 961 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~--cl~~dP~~Rps~~ 1038 (1057)
+|||++|+.||......+. ...+...... ...+....+++++.+++.+ |+..+|..||++.
T Consensus 238 l~elltG~~Pf~~~~~~~~-------------~~~i~~~~~~----~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~ 300 (381)
T cd05626 238 LFEMLVGQPPFLAPTPTET-------------QLKVINWENT----LHIPPQVKLSPEAVDLITKLCCSAEERLGRNGAD 300 (381)
T ss_pred HHHHHhCCCCCcCCCHHHH-------------HHHHHccccc----cCCCCCCCCCHHHHHHHHHHccCcccccCCCCHH
Confidence 9999999999975321111 0111110000 0111112346778899988 5556666799999
Q ss_pred HHHHH
Q 001544 1039 EIVRR 1043 (1057)
Q Consensus 1039 evl~~ 1043 (1057)
|+++|
T Consensus 301 ~~l~h 305 (381)
T cd05626 301 DIKAH 305 (381)
T ss_pred HHhcC
Confidence 99987
No 104
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-37 Score=334.38 Aligned_cols=245 Identities=28% Similarity=0.434 Sum_probs=206.5
Q ss_pred ceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCCChh
Q 001544 775 NLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNGSLE 853 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~ 853 (1057)
-++|+|.||+||-|++. +...+|||.+........+.+.+|+.+.++++|.|||+++|.+.++++.-+.||-++||+|.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 37999999999999865 56789999997777777788999999999999999999999999999999999999999999
Q ss_pred HHHhcCCccC--CHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC-CCCcEEEEcccccccccCCCCcccccc
Q 001544 854 KCLYSGNYIL--DIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLIGEDQSMTQTQ 930 (1057)
Q Consensus 854 ~~l~~~~~~l--~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 930 (1057)
+.++..=.++ .+.+.--+.+||++||.||| +..|||||||-+|||++ -.|.+||+|||-++++.+- ......
T Consensus 661 sLLrskWGPlKDNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi--nP~TET 735 (1226)
T KOG4279|consen 661 SLLRSKWGPLKDNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI--NPCTET 735 (1226)
T ss_pred HHHHhccCCCccchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhccC--Cccccc
Confidence 9998765556 67778889999999999999 99999999999999997 6899999999999987432 223334
Q ss_pred ccccccccCccccCCCC--CCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchh
Q 001544 931 TLATLGYMAPEYGREGR--VSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKH 1008 (1057)
Q Consensus 931 ~~~t~~y~aPE~~~~~~--~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1057)
..||..|||||++..+. |+.++|||||||++.||.||++||.+.-.+ ...++.... ...+
T Consensus 736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp---------------qAAMFkVGm---yKvH 797 (1226)
T KOG4279|consen 736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP---------------QAAMFKVGM---YKVH 797 (1226)
T ss_pred cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh---------------hHhhhhhcc---eecC
Confidence 57999999999997664 788999999999999999999999763222 112222221 2234
Q ss_pred hHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHH
Q 001544 1009 FAAKEQCASSVFNLAMECTVESPDERITAKEIVR 1042 (1057)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1042 (1057)
.+.+++++.+...++.+|+.+||.+||+|+++++
T Consensus 798 P~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 798 PPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred CCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 4566788999999999999999999999999875
No 105
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=2.8e-36 Score=355.13 Aligned_cols=255 Identities=24% Similarity=0.340 Sum_probs=204.8
Q ss_pred HHhCCCCCCceeccccCeEEEEEEe-cCCcEEEEEEeecc--chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCC----
Q 001544 766 QATNGFSENNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQ--HERAFKSFDTECEVMKSIRHRNLTKIISSCSNED---- 838 (1057)
Q Consensus 766 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 838 (1057)
...++|++.+.||+|+||+||+|+. .+|+.||||++... .......+.+|+.++..++|+||+++++.+...+
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 3456899999999999999999975 47999999998644 3345567889999999999999999988764332
Q ss_pred ----eeEEEEEEccCCChhHHHhcC---CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEE
Q 001544 839 ----FKALILEYMRNGSLEKCLYSG---NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLS 911 (1057)
Q Consensus 839 ----~~~lV~E~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 911 (1057)
..++||||+++|+|.+++... ...+++..+..++.|++.||+|+| +.+|+||||||+||+++.++.+||+
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEeCCCCEEEE
Confidence 367999999999999988653 246899999999999999999999 9999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccch
Q 001544 912 DFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPI 991 (1057)
Q Consensus 912 Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 991 (1057)
|||+++.+.............||+.|+|||++.+..++.++|||||||++|||++|+.||.... ...+..
T Consensus 186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~-----~~~~~~----- 255 (496)
T PTZ00283 186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN-----MEEVMH----- 255 (496)
T ss_pred ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHH-----
Confidence 9999986543222222334568999999999999899999999999999999999999986521 111110
Q ss_pred hHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 992 SMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
...... ..+.+..+++++.+++.+||+.||++||++.+++++
T Consensus 256 ---~~~~~~-------~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 256 ---KTLAGR-------YDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred ---HHhcCC-------CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 111000 001123456789999999999999999999999876
No 106
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=7.2e-36 Score=326.59 Aligned_cols=254 Identities=25% Similarity=0.356 Sum_probs=203.1
Q ss_pred CCCCCCceeccccCeEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 769 NGFSENNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
.+|++.+.||+|+||.||+|+. .+++.||+|++..........+.+|+.++++++||||+++++++..++..++||||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 4688999999999999999986 468999999997655455567889999999999999999999999999999999999
Q ss_pred cCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccc
Q 001544 848 RNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT 927 (1057)
Q Consensus 848 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 927 (1057)
++++|.+++.... .+++.++..++.|+++|++||| +.+|+|||+||+||+++.++.+||+|||++..+.... ..
T Consensus 89 ~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~--~~ 162 (267)
T cd06646 89 GGGSLQDIYHVTG-PLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI--AK 162 (267)
T ss_pred CCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccceeecccc--cc
Confidence 9999999887544 5899999999999999999999 8999999999999999999999999999998653211 12
Q ss_pred cccccccccccCccccC---CCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccc
Q 001544 928 QTQTLATLGYMAPEYGR---EGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLIT 1004 (1057)
Q Consensus 928 ~~~~~~t~~y~aPE~~~---~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1057)
.....++..|+|||.+. ...++.++||||+||++|||++|+.||......+.. ..+.. ...
T Consensus 163 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~-~~~~~------------~~~--- 226 (267)
T cd06646 163 RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL-FLMSK------------SNF--- 226 (267)
T ss_pred cCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh-eeeec------------CCC---
Confidence 23346788999999874 345788999999999999999999998542211100 00000 000
Q ss_pred cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 1005 EDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
...........+.++.+++.+||..+|++||+++++++++
T Consensus 227 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 227 QPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 0001111123456789999999999999999999999875
No 107
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=2.9e-36 Score=343.07 Aligned_cols=247 Identities=25% Similarity=0.406 Sum_probs=194.8
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
+|+..++||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++|+||+++++++.+.+..++||||+
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 154 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM 154 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence 4566789999999999999865 68999999986543 344577899999999999999999999999999999999999
Q ss_pred cCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccc
Q 001544 848 RNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT 927 (1057)
Q Consensus 848 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 927 (1057)
++|+|.+. ...++..+..++.||+.||+||| +.+|+||||||+||++++++.+||+|||+++...... ..
T Consensus 155 ~~~~L~~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~--~~ 224 (353)
T PLN00034 155 DGGSLEGT-----HIADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM--DP 224 (353)
T ss_pred CCCccccc-----ccCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcccccceeccccc--cc
Confidence 99998653 23567788899999999999999 9999999999999999999999999999998653211 12
Q ss_pred cccccccccccCccccCC-----CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccc
Q 001544 928 QTQTLATLGYMAPEYGRE-----GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLL 1002 (1057)
Q Consensus 928 ~~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1057)
.....||..|+|||++.. ...+.++|||||||++|||++|+.||...... .|... ..... .
T Consensus 225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~-----~~~~~-----~~~~~----~ 290 (353)
T PLN00034 225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG-----DWASL-----MCAIC----M 290 (353)
T ss_pred ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc-----cHHHH-----HHHHh----c
Confidence 234568999999998743 23456899999999999999999998732111 11110 00000 0
Q ss_pred cccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1003 ITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.........++.++.+++.+||+.||++||++.|+++|
T Consensus 291 ---~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 291 ---SQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred ---cCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00011112456789999999999999999999999987
No 108
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.7e-36 Score=345.57 Aligned_cols=253 Identities=25% Similarity=0.382 Sum_probs=205.6
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
++|++.+.||+|+||+||+|+.. +|+.||||+++... ......+.+|++++..++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36888999999999999999865 68999999996542 234567889999999999999999999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC-
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED- 923 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~- 923 (1057)
||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 81 e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~ 156 (350)
T cd05573 81 EYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKD 156 (350)
T ss_pred cCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCc
Confidence 999999999998776 45899999999999999999999 8999999999999999999999999999998653322
Q ss_pred --------------------------CccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCccccc
Q 001544 924 --------------------------QSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSG 977 (1057)
Q Consensus 924 --------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~ 977 (1057)
.........||+.|+|||++.+..++.++||||+||++|||++|+.||......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~ 236 (350)
T cd05573 157 REYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ 236 (350)
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH
Confidence 011223456899999999999999999999999999999999999998753211
Q ss_pred ccchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCC-HHHHHHH
Q 001544 978 EMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERIT-AKEIVRR 1043 (1057)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-~~evl~~ 1043 (1057)
+ . ...+.... .....+....+++++.+++.+|+. ||++||+ +.|+++|
T Consensus 237 ~----~---------~~~i~~~~----~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 237 E----T---------YNKIINWK----ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred H----H---------HHHHhccC----CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 0 0 01111100 000011111256788999999997 9999999 9999987
No 109
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=3.3e-36 Score=338.16 Aligned_cols=242 Identities=25% Similarity=0.356 Sum_probs=196.3
Q ss_pred ceeccccCeEEEEEEe----cCCcEEEEEEeeccc----hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 775 NLIGRGSFGSVYIARL----QNGIEVAVKTFDLQH----ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
+.||+|+||.||+|+. .+++.||||+++... ......+.+|++++++++||||+++++++..++..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999999975 357899999986432 23345678899999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 847 MRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
+++|+|.+++.... .+.+..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... .
T Consensus 82 ~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 155 (323)
T cd05584 82 LSGGELFMHLEREG-IFMEDTACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG--T 155 (323)
T ss_pred CCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC--C
Confidence 99999999887654 4788889999999999999999 9999999999999999999999999999987542211 1
Q ss_pred ccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccc
Q 001544 927 TQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITED 1006 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1057)
......|++.|+|||++.+..++.++||||+||++|||++|+.||...... . ....+....
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~-----~--------~~~~~~~~~------ 216 (323)
T cd05584 156 VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK-----K--------TIDKILKGK------ 216 (323)
T ss_pred cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH-----H--------HHHHHHcCC------
Confidence 223346899999999998888999999999999999999999998652111 0 011111111
Q ss_pred hhhHHHHHHHHHHHHHHhHcccCCCCCCC-----CHHHHHHH
Q 001544 1007 KHFAAKEQCASSVFNLAMECTVESPDERI-----TAKEIVRR 1043 (1057)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 1043 (1057)
...+..+++++.+++.+|++.+|++|| ++.++++|
T Consensus 217 --~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 217 --LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred --CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 111123467789999999999999999 88888875
No 110
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.2e-36 Score=345.99 Aligned_cols=253 Identities=24% Similarity=0.318 Sum_probs=198.9
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
++|++.+.||+|+||+||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 46888999999999999999754 78999999986432 234567889999999999999999999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
||+++|+|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+|++|||+++.+.....
T Consensus 81 E~~~gg~L~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 156 (377)
T cd05629 81 EFLPGGDLMTMLIKYD-TFSEDVTRFYMAECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHD 156 (377)
T ss_pred eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEeecccccccccccc
Confidence 9999999999987654 5889999999999999999999 99999999999999999999999999999864321100
Q ss_pred c---------------------------------------------cccccccccccccCccccCCCCCCccchHHHHHH
Q 001544 925 S---------------------------------------------MTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGI 959 (1057)
Q Consensus 925 ~---------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~ 959 (1057)
. .......||+.|+|||++.+..++.++||||+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 236 (377)
T cd05629 157 SAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGA 236 (377)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecch
Confidence 0 0001246899999999998889999999999999
Q ss_pred HHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCC---CC
Q 001544 960 LLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDER---IT 1036 (1057)
Q Consensus 960 il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---ps 1036 (1057)
++|||++|+.||......+. . ..+.... ....++....++.++.+++.+|+. +|.+| ++
T Consensus 237 il~elltG~~Pf~~~~~~~~-~------------~~i~~~~----~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~ 298 (377)
T cd05629 237 IMFECLIGWPPFCSENSHET-Y------------RKIINWR----ETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGG 298 (377)
T ss_pred hhhhhhcCCCCCCCCCHHHH-H------------HHHHccC----CccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCC
Confidence 99999999999865221110 0 0010000 000111112345678899999997 67765 59
Q ss_pred HHHHHHH
Q 001544 1037 AKEIVRR 1043 (1057)
Q Consensus 1037 ~~evl~~ 1043 (1057)
+.|+++|
T Consensus 299 ~~~~l~h 305 (377)
T cd05629 299 AHEIKSH 305 (377)
T ss_pred HHHHhcC
Confidence 9999987
No 111
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=6.5e-36 Score=328.66 Aligned_cols=256 Identities=26% Similarity=0.417 Sum_probs=203.2
Q ss_pred hCCCCCCceeccccCeEEEEEEec------CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCee
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ------NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFK 840 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 840 (1057)
.++|++.+.||+|+||.||+|... .+..||+|.+.... ......+.+|+.++++++|+||+++++++.+.+..
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 456888999999999999999865 35789999886443 33446789999999999999999999999988899
Q ss_pred EEEEEEccCCChhHHHhcCC------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC---cEEEE
Q 001544 841 ALILEYMRNGSLEKCLYSGN------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM---VAHLS 911 (1057)
Q Consensus 841 ~lV~E~~~~gsL~~~l~~~~------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~---~~kl~ 911 (1057)
++||||+++++|.+++...+ ..+++.++.+++.||+.|++||| +.+++||||||+||+++.++ .+|++
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchheEEEeccCCCcceEec
Confidence 99999999999999987653 25899999999999999999999 89999999999999998654 69999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccc
Q 001544 912 DFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLP 990 (1057)
Q Consensus 912 Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 990 (1057)
|||+++................+..|+|||++.+..++.++|||||||++|||++ |..||......+
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~------------ 229 (277)
T cd05036 162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE------------ 229 (277)
T ss_pred cCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH------------
Confidence 9999987632222111222233568999999988899999999999999999997 888886521111
Q ss_pred hhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHH
Q 001544 991 ISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLK 1046 (1057)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1046 (1057)
..+.+.... ....+..++..+.+++.+|++.+|++||++.|++++|++
T Consensus 230 --~~~~~~~~~------~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 230 --VMEFVTGGG------RLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred --HHHHHHcCC------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 111111110 011123456778999999999999999999999999863
No 112
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=4e-36 Score=337.80 Aligned_cols=245 Identities=22% Similarity=0.345 Sum_probs=195.6
Q ss_pred CCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHH---HhcCCCCceeEeeeeccCCeeEEE
Q 001544 771 FSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVM---KSIRHRNLTKIISSCSNEDFKALI 843 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lV 843 (1057)
|++.+.||+|+||.||+|... +++.||||+++... ....+.+.+|++++ ++++||||+++++++..++..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 567899999999999999865 68999999996542 22345566676655 566799999999999999999999
Q ss_pred EEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC
Q 001544 844 LEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 923 (1057)
|||+++|+|...+... .+++.++..++.|++.|++||| +.+|+||||||+||++++++.+||+|||+++.....
T Consensus 81 ~E~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~- 154 (324)
T cd05589 81 MEYAAGGDLMMHIHTD--VFSEPRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF- 154 (324)
T ss_pred EcCCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC-
Confidence 9999999999888653 4899999999999999999999 999999999999999999999999999998753221
Q ss_pred CccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccccc
Q 001544 924 QSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLI 1003 (1057)
Q Consensus 924 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1057)
........|++.|+|||.+.+..++.++||||+||++|||++|+.||...... ... ..+.....
T Consensus 155 -~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~-----~~~--------~~i~~~~~-- 218 (324)
T cd05589 155 -GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE-----EVF--------DSIVNDEV-- 218 (324)
T ss_pred -CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH-----HHH--------HHHHhCCC--
Confidence 12223456899999999999889999999999999999999999998652111 000 01111000
Q ss_pred ccchhhHHHHHHHHHHHHHHhHcccCCCCCCC-----CHHHHHHH
Q 001544 1004 TEDKHFAAKEQCASSVFNLAMECTVESPDERI-----TAKEIVRR 1043 (1057)
Q Consensus 1004 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 1043 (1057)
..+..++.++.+++.+|++.||++|| ++.++++|
T Consensus 219 ------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 219 ------RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred ------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 01123567788999999999999999 57777765
No 113
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.1e-36 Score=340.25 Aligned_cols=242 Identities=25% Similarity=0.342 Sum_probs=196.7
Q ss_pred ceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCC
Q 001544 775 NLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNG 850 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~g 850 (1057)
+.||+|+||.||+|... +|+.||+|+++... ......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999754 68999999996542 234466788999999999999999999999999999999999999
Q ss_pred ChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCC-CCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccc
Q 001544 851 SLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYS-APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQT 929 (1057)
Q Consensus 851 sL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 929 (1057)
+|.+++.... .+++.++..++.||+.||+||| + .+|+||||||+||+++.++.+||+|||+++..... .....
T Consensus 81 ~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH---~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~--~~~~~ 154 (325)
T cd05594 81 ELFFHLSRER-VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GATMK 154 (325)
T ss_pred cHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC--Ccccc
Confidence 9998886654 5899999999999999999999 7 79999999999999999999999999998753221 11223
Q ss_pred cccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhh
Q 001544 930 QTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHF 1009 (1057)
Q Consensus 930 ~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1057)
...||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...+.+.... .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~--------------~~~~~i~~~~-------~ 213 (325)
T cd05594 155 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------------KLFELILMEE-------I 213 (325)
T ss_pred cccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH--------------HHHHHHhcCC-------C
Confidence 346899999999999889999999999999999999999998652111 0111110000 0
Q ss_pred HHHHHHHHHHHHHHhHcccCCCCCCC-----CHHHHHHH
Q 001544 1010 AAKEQCASSVFNLAMECTVESPDERI-----TAKEIVRR 1043 (1057)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 1043 (1057)
..+..+++++.+++.+|++.||++|+ ++.++++|
T Consensus 214 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 214 RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 01123466789999999999999997 89999876
No 114
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=8.7e-36 Score=328.13 Aligned_cols=260 Identities=22% Similarity=0.363 Sum_probs=207.1
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCc----EEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGI----EVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKA 841 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 841 (1057)
..+|+..++||+|+||+||+|.+. +|+ .||+|+++... ......+.+|+.+++.++||||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcE
Confidence 356888899999999999999743 444 58999986443 34457788999999999999999999998754 467
Q ss_pred EEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccC
Q 001544 842 LILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIG 921 (1057)
Q Consensus 842 lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 921 (1057)
+++||+++|+|.+++......+++.++..++.|+++||+||| +++|+||||||+||++++++.+||+|||+++....
T Consensus 85 l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~ 161 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDI 161 (279)
T ss_pred EEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCCCceeeccc
Confidence 999999999999999876667999999999999999999999 99999999999999999999999999999987643
Q ss_pred CCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcc
Q 001544 922 EDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDAN 1000 (1057)
Q Consensus 922 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1057)
...........++..|+|||...+..++.++|||||||++|||++ |..||+..... ....+ +...
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~------------~~~~ 227 (279)
T cd05109 162 DETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR--EIPDL------------LEKG 227 (279)
T ss_pred ccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHH------------HHCC
Confidence 222222222345678999999988889999999999999999998 88887642111 11111 1111
Q ss_pred cccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHHHH
Q 001544 1001 LLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRDFL 1051 (1057)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~ 1051 (1057)
. ..+.+..++.++.+++.+||+.||++||++.|+++.++++.++.
T Consensus 228 ~------~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 228 E------RLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred C------cCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 0 01111235667899999999999999999999999998887654
No 115
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=4.9e-36 Score=332.75 Aligned_cols=259 Identities=28% Similarity=0.460 Sum_probs=206.9
Q ss_pred HhCCCCCCceeccccCeEEEEEEec------CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCC
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARLQ------NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSI-RHRNLTKIISSCSNED 838 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 838 (1057)
..++|+..+.||+|+||.||+|... ....||+|.+.... ......+.+|++++.++ +||||+++++++..++
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 3456888899999999999999754 23689999986542 34456788999999999 7999999999999999
Q ss_pred eeEEEEEEccCCChhHHHhcC---------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC
Q 001544 839 FKALILEYMRNGSLEKCLYSG---------------NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD 903 (1057)
Q Consensus 839 ~~~lV~E~~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~ 903 (1057)
..++||||+++|+|.+++... ...+++..+++++.|++.|++||| +.+|+||||||+||+++
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~Nil~~ 166 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SKKCIHRDLAARNVLVT 166 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCccccccceeeEEEc
Confidence 999999999999999998642 246889999999999999999999 99999999999999999
Q ss_pred CCCcEEEEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchh
Q 001544 904 DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLK 982 (1057)
Q Consensus 904 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~ 982 (1057)
+++.+|++|||.++.+.............++..|+|||+..+..++.++|||||||++||+++ |..||......+
T Consensus 167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---- 242 (293)
T cd05053 167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE---- 242 (293)
T ss_pred CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH----
Confidence 999999999999987643322222222335678999999988889999999999999999998 888875421110
Q ss_pred hhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhH
Q 001544 983 HWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIR 1048 (1057)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~ 1048 (1057)
..+...... ....+..++.++.+++.+|+..+|++|||+.|+++.|+++.
T Consensus 243 ----------~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 243 ----------LFKLLKEGY------RMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred ----------HHHHHHcCC------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 111111110 01112234667899999999999999999999999998874
No 116
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=6.9e-36 Score=328.94 Aligned_cols=254 Identities=27% Similarity=0.483 Sum_probs=205.1
Q ss_pred CCCCCceeccccCeEEEEEEec------CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ------NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALI 843 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 843 (1057)
+|...++||+|+||.||+|... ++..||+|.+..........+.+|++++++++|+||+++++++.+.+..++|
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (280)
T cd05092 6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMV 85 (280)
T ss_pred hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEE
Confidence 5677899999999999999632 4668999998766666678899999999999999999999999999999999
Q ss_pred EEEccCCChhHHHhcCC--------------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEE
Q 001544 844 LEYMRNGSLEKCLYSGN--------------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAH 909 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~--------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 909 (1057)
|||+++|+|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+||++++++.+|
T Consensus 86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~nil~~~~~~~k 162 (280)
T cd05092 86 FEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFVHRDLATRNCLVGQGLVVK 162 (280)
T ss_pred EecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCeecccccHhhEEEcCCCCEE
Confidence 99999999999987543 24789999999999999999999 99999999999999999999999
Q ss_pred EEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhc
Q 001544 910 LSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDF 988 (1057)
Q Consensus 910 l~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 988 (1057)
|+|||+++.+.............+++.|+|||...+..++.++|||||||++|||++ |..||......+.
T Consensus 163 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--------- 233 (280)
T cd05092 163 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA--------- 233 (280)
T ss_pred ECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH---------
Confidence 999999976533222222223345678999999988899999999999999999998 8888754211110
Q ss_pred cchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHH
Q 001544 989 LPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLK 1046 (1057)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1046 (1057)
........ ....+..++..+.+++.+||+.||++||++.|+.+.|++
T Consensus 234 ----~~~~~~~~-------~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 234 ----IECITQGR-------ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred ----HHHHHcCc-------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 01111100 011112456778999999999999999999999998863
No 117
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.2e-35 Score=329.04 Aligned_cols=267 Identities=24% Similarity=0.313 Sum_probs=196.6
Q ss_pred CCCCCCceeccccCeEEEEEEec--CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhc---CCCCceeEeeeec-----c
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ--NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSI---RHRNLTKIISSCS-----N 836 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~-----~ 836 (1057)
.+|++.+.||+|+||+||+|+.. +++.||||+++... ......+.+|+++++++ +||||+++++++. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36888999999999999999753 47889999986432 22234556777777766 6999999999874 3
Q ss_pred CCeeEEEEEEccCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccc
Q 001544 837 EDFKALILEYMRNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGI 915 (1057)
Q Consensus 837 ~~~~~lV~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 915 (1057)
....++||||++ ++|.+++.... ..+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCEEEccccc
Confidence 456899999996 58988886543 45899999999999999999999 99999999999999999999999999999
Q ss_pred cccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhc---cchh
Q 001544 916 AKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDF---LPIS 992 (1057)
Q Consensus 916 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~---~~~~ 992 (1057)
++..... .......+++.|+|||.+.+..++.++||||+||++|||++|++||......+ ......... .+..
T Consensus 157 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~-~~~~i~~~~~~~~~~~ 232 (290)
T cd07862 157 ARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGEED 232 (290)
T ss_pred eEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHHhCCCChhh
Confidence 9865322 22334568899999999988889999999999999999999999987632211 111111000 0000
Q ss_pred HHHhh---hcccccccchh-hHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 993 MMKII---DANLLITEDKH-FAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 993 ~~~~~---~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
..... ........... ......++..+.+++.+|++.||++|||+.|+++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 233 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred chhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 00000 00000000000 01112456778999999999999999999999875
No 118
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=3.2e-36 Score=343.93 Aligned_cols=254 Identities=22% Similarity=0.273 Sum_probs=202.5
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALI 843 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 843 (1057)
.++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 457889999999999999999865 68999999996432 23345678899999999999999999999999999999
Q ss_pred EEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC
Q 001544 844 LEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 923 (1057)
|||+++|+|.+++... .+++..+..++.|++.||+||| +++|+||||||+||++++++.+||+|||++.......
T Consensus 122 ~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~ 196 (370)
T cd05596 122 MEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANG 196 (370)
T ss_pred EcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCC
Confidence 9999999999988764 3788889999999999999999 9999999999999999999999999999998653221
Q ss_pred CccccccccccccccCccccCCC----CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhc
Q 001544 924 QSMTQTQTLATLGYMAPEYGREG----RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDA 999 (1057)
Q Consensus 924 ~~~~~~~~~~t~~y~aPE~~~~~----~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1057)
........||+.|+|||++.+. .++.++||||+||++|||++|+.||...... .. ...+.+.
T Consensus 197 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~----~~---------~~~i~~~ 262 (370)
T cd05596 197 -MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV----GT---------YSKIMDH 262 (370)
T ss_pred -cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH----HH---------HHHHHcC
Confidence 1122345689999999987643 4788999999999999999999998652110 00 1111111
Q ss_pred ccccccchhhHHHHHHHHHHHHHHhHcccCCCCC--CCCHHHHHHHH
Q 001544 1000 NLLITEDKHFAAKEQCASSVFNLAMECTVESPDE--RITAKEIVRRL 1044 (1057)
Q Consensus 1000 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~~L 1044 (1057)
.. ...++....++.++.+++.+|+..+|++ ||++.|+++|-
T Consensus 263 ~~----~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~ 305 (370)
T cd05596 263 KN----SLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHP 305 (370)
T ss_pred CC----cCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCc
Confidence 00 0111112235678899999999999988 99999998873
No 119
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.2e-35 Score=329.90 Aligned_cols=259 Identities=26% Similarity=0.432 Sum_probs=205.2
Q ss_pred CCCCCCceeccccCeEEEEEEecC-C--cEEEEEEeecc-chhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCCeeEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQN-G--IEVAVKTFDLQ-HERAFKSFDTECEVMKSI-RHRNLTKIISSCSNEDFKALI 843 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~~-~--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 843 (1057)
++|++.++||+|+||.||+|..++ + ..+|+|.++.. .....+.+.+|+++++++ +||||+++++++.+.+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 478889999999999999998653 3 35788888643 334457789999999999 799999999999999999999
Q ss_pred EEEccCCChhHHHhcCC---------------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcE
Q 001544 844 LEYMRNGSLEKCLYSGN---------------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVA 908 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 908 (1057)
+||+++|+|.+++.... ..+++.++..++.|++.|++||| +++|+||||||+||++++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCcCCcceEEECCCCeE
Confidence 99999999999986532 24788999999999999999999 9999999999999999999999
Q ss_pred EEEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhh
Q 001544 909 HLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVND 987 (1057)
Q Consensus 909 kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 987 (1057)
||+|||++.... ..........+..|+|||......++.++|||||||++|||++ |..||......+
T Consensus 159 kl~dfg~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~--------- 226 (297)
T cd05089 159 KIADFGLSRGEE---VYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE--------- 226 (297)
T ss_pred EECCcCCCcccc---ceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---------
Confidence 999999986421 1111111223457999999988889999999999999999997 999986521110
Q ss_pred ccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHHHHhh
Q 001544 988 FLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRDFLLR 1053 (1057)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~~ 1053 (1057)
......... ....+..++.++.+++.+||+.+|.+||++.++++.|+.+.+....
T Consensus 227 -----~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~ 281 (297)
T cd05089 227 -----LYEKLPQGY------RMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKA 281 (297)
T ss_pred -----HHHHHhcCC------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 011111110 1111134567889999999999999999999999999998775443
No 120
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=2.5e-35 Score=326.45 Aligned_cols=257 Identities=26% Similarity=0.437 Sum_probs=205.6
Q ss_pred CCCCCceeccccCeEEEEEEec------CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ------NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKAL 842 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 842 (1057)
+|++.+.||+|+||+||+|... ....||+|.+.... .....++.+|+.++++++||||+++++++...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4677899999999999999753 23579999886543 3345778999999999999999999999999999999
Q ss_pred EEEEccCCChhHHHhcCC-----------------------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCC
Q 001544 843 ILEYMRNGSLEKCLYSGN-----------------------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSN 899 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N 899 (1057)
|+||+.+|+|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA---EMKLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH---HCCeehhhhhhhe
Confidence 999999999999876421 34788999999999999999999 9999999999999
Q ss_pred eeeCCCCcEEEEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccc
Q 001544 900 VLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGE 978 (1057)
Q Consensus 900 ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~ 978 (1057)
|++++++.+||+|||+++...............++..|+|||...+..++.++||||||+++|||++ |..||......
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~- 236 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE- 236 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH-
Confidence 9999999999999999986543332222233345678999999888889999999999999999999 99888642111
Q ss_pred cchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHH
Q 001544 979 MTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRD 1049 (1057)
Q Consensus 979 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~ 1049 (1057)
...+...... ....+..++.++.+++.+|++.+|++||++.|+++.|+++..
T Consensus 237 -------------~~~~~~~~~~------~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 237 -------------RLFNLLKTGY------RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred -------------HHHHHHhCCC------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 1111111111 011123456778999999999999999999999999998753
No 121
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.5e-35 Score=325.27 Aligned_cols=254 Identities=27% Similarity=0.457 Sum_probs=201.5
Q ss_pred CCCCceeccccCeEEEEEEecC----CcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCe-----
Q 001544 771 FSENNLIGRGSFGSVYIARLQN----GIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDF----- 839 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 839 (1057)
|++.+.||+|+||.||+|.... +..||||+++... ......+.+|++.++.++||||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5677899999999999997542 3779999986432 3445678999999999999999999998865543
Q ss_pred -eEEEEEEccCCChhHHHhcC-----CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcc
Q 001544 840 -KALILEYMRNGSLEKCLYSG-----NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDF 913 (1057)
Q Consensus 840 -~~lV~E~~~~gsL~~~l~~~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 913 (1057)
.++|+||+++|+|.+++... ...+++.++..++.|++.||+||| +.+++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchheEEECCCCeEEECCc
Confidence 78999999999999887543 245899999999999999999999 899999999999999999999999999
Q ss_pred cccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchh
Q 001544 914 GIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPIS 992 (1057)
Q Consensus 914 g~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 992 (1057)
|+++.+..............+..|+|||...+..++.++|||||||++|||++ |..||...... ....+
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~--~~~~~-------- 227 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH--EIYDY-------- 227 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH--HHHHH--------
Confidence 99987643332222222345678999999988889999999999999999999 88887552211 01011
Q ss_pred HHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHh
Q 001544 993 MMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKI 1047 (1057)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 1047 (1057)
..+.. ....+..++.++.+++.+||+.||++||++.|++++|+++
T Consensus 228 ---~~~~~-------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 228 ---LRHGN-------RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred ---HHcCC-------CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00000 1111234567899999999999999999999999999875
No 122
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=9.6e-36 Score=332.44 Aligned_cols=259 Identities=27% Similarity=0.454 Sum_probs=207.0
Q ss_pred CCCCCCceeccccCeEEEEEEec--------CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCC
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ--------NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSI-RHRNLTKIISSCSNED 838 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 838 (1057)
++|.+.+.||+|+||.||+|... ++..||+|.++... ......+.+|+++++++ +||||+++++++.+.+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 46889999999999999999742 23579999997542 34456788899999999 7999999999999999
Q ss_pred eeEEEEEEccCCChhHHHhcCC---------------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC
Q 001544 839 FKALILEYMRNGSLEKCLYSGN---------------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD 903 (1057)
Q Consensus 839 ~~~lV~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~ 903 (1057)
..++||||+++|+|.+++.... ..+++.++..++.|++.||+||| +.+++||||||+||+++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHHheEEc
Confidence 9999999999999999997642 24888999999999999999999 89999999999999999
Q ss_pred CCCcEEEEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchh
Q 001544 904 DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLK 982 (1057)
Q Consensus 904 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~ 982 (1057)
+++.+||+|||.++...............++..|+|||...+..++.++||||+||++|||++ |..||..... .
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~-----~ 249 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-----E 249 (307)
T ss_pred CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH-----H
Confidence 999999999999876532211111222234568999999988889999999999999999998 7888754211 1
Q ss_pred hhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHHH
Q 001544 983 HWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRDF 1050 (1057)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 1050 (1057)
. ..+.+.... ....+..++.++.+++.+|++.+|++||++.|+++.|+++.+.
T Consensus 250 ~---------~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 250 E---------LFKLLKEGH------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred H---------HHHHHHcCC------CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 1 111111110 1112234567889999999999999999999999999998876
No 123
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=9.2e-36 Score=328.65 Aligned_cols=251 Identities=22% Similarity=0.347 Sum_probs=201.9
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
.|+..++||+|+||+||+|... +++.||||++.... ......+.+|++++++++||||+++++++.+++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 3778899999999999999864 68999999986432 2223567789999999999999999999999999999999
Q ss_pred EccCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 846 YMRNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
|+++|+|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||++++++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~-- 155 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG-- 155 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC--
Confidence 999999998886543 46899999999999999999999 899999999999999999999999999999865221
Q ss_pred ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccc
Q 001544 925 SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLIT 1004 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1057)
.......|+..|+|||++.+..++.++||||+||++|||++|+.||...... ..... ....+...
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~-~~~~~---------~~~~~~~~---- 220 (285)
T cd05605 156 -ETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK-VKREE---------VERRVKED---- 220 (285)
T ss_pred -CccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh-hHHHH---------HHHHhhhc----
Confidence 1222346889999999998888999999999999999999999998652111 10000 01111100
Q ss_pred cchhhHHHHHHHHHHHHHHhHcccCCCCCCC-----CHHHHHHH
Q 001544 1005 EDKHFAAKEQCASSVFNLAMECTVESPDERI-----TAKEIVRR 1043 (1057)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 1043 (1057)
....+..++..+.+++.+||+.||++|| ++.++++|
T Consensus 221 ---~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 221 ---QEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred ---ccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 0111133567789999999999999999 88899876
No 124
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1e-35 Score=327.75 Aligned_cols=260 Identities=24% Similarity=0.387 Sum_probs=209.1
Q ss_pred hCCCCCCceeccccCeEEEEEEecC-----CcEEEEEEeecc-chhHHHHHHHHHHHHHhcCCCCceeEeeeecc-CCee
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQN-----GIEVAVKTFDLQ-HERAFKSFDTECEVMKSIRHRNLTKIISSCSN-EDFK 840 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 840 (1057)
.++|++.+.||+|+||.||+|...+ +..||+|++... .....+.+.+|+.++++++||||+++++++.. +...
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4578888999999999999998765 688999998643 33456778899999999999999999998765 5788
Q ss_pred EEEEEEccCCChhHHHhcCC-------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcc
Q 001544 841 ALILEYMRNGSLEKCLYSGN-------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDF 913 (1057)
Q Consensus 841 ~lV~E~~~~gsL~~~l~~~~-------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 913 (1057)
++++||+++|+|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+||++++++.+|++||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEECCC
Confidence 99999999999999986532 45899999999999999999999 999999999999999999999999999
Q ss_pred cccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchh
Q 001544 914 GIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPIS 992 (1057)
Q Consensus 914 g~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 992 (1057)
|+++.+.............++..|+|||++.+..++.++||||+|+++||+++ |+.||..... .....+...
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~----- 234 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--FEMAAYLKD----- 234 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--HHHHHHHHc-----
Confidence 99986543332222223345678999999988889999999999999999999 9999865211 111111110
Q ss_pred HHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHHH
Q 001544 993 MMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRDF 1050 (1057)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 1050 (1057)
.. .......++.++.+++.+||..||++|||+.|+++.|+.+.+.
T Consensus 235 -------~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 235 -------GY------RLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred -------CC------CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 00 0111123567789999999999999999999999999998764
No 125
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.3e-35 Score=330.92 Aligned_cols=260 Identities=27% Similarity=0.458 Sum_probs=207.7
Q ss_pred hCCCCCCceeccccCeEEEEEEec--------CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhc-CCCCceeEeeeeccC
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ--------NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSI-RHRNLTKIISSCSNE 837 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 837 (1057)
.++|++.+.||+|+||.||+|+.. ++..||+|.++... .....++.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 456888899999999999999631 34579999986442 34457889999999999 899999999999999
Q ss_pred CeeEEEEEEccCCChhHHHhcCC---------------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeee
Q 001544 838 DFKALILEYMRNGSLEKCLYSGN---------------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL 902 (1057)
Q Consensus 838 ~~~~lV~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill 902 (1057)
+..++||||+++|+|.+++.... ..+++.++..++.||++|++||| +++|+||||||+||++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH---HCCeeecccccceEEE
Confidence 99999999999999999987532 34788899999999999999999 9999999999999999
Q ss_pred CCCCcEEEEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccch
Q 001544 903 DDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTL 981 (1057)
Q Consensus 903 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~ 981 (1057)
++++.+||+|||.++.+.............++..|+|||+..+..++.++||||||+++||+++ |..||.... .
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----~ 245 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-----V 245 (304)
T ss_pred cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC-----H
Confidence 9999999999999987643322222233345678999999988889999999999999999998 777775421 1
Q ss_pred hhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHHH
Q 001544 982 KHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRDF 1050 (1057)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 1050 (1057)
..+. +.+.... ....+..++.++.+++.+||+.+|++||++.|+++.|+++...
T Consensus 246 ~~~~---------~~~~~~~------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 246 EELF---------KLLKEGH------RMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred HHHH---------HHHHcCC------cCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 1111 1111000 0111234567899999999999999999999999999998764
No 126
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.9e-35 Score=320.96 Aligned_cols=247 Identities=25% Similarity=0.450 Sum_probs=197.6
Q ss_pred eccccCeEEEEEEec---CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCCCh
Q 001544 777 IGRGSFGSVYIARLQ---NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNGSL 852 (1057)
Q Consensus 777 lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL 852 (1057)
||+|+||.||+|.+. ++..||||++.... ....+.+.+|++++++++||||+++++++. .+..++||||+++|+|
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L 81 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPL 81 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCH
Confidence 899999999999754 35679999986543 334567899999999999999999999886 4567899999999999
Q ss_pred hHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc-ccccc
Q 001544 853 EKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM-TQTQT 931 (1057)
Q Consensus 853 ~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~ 931 (1057)
.+++......+++.++.+++.|++.|++||| +++++||||||+||+++.++.+|++|||++.......... .....
T Consensus 82 ~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 158 (257)
T cd05115 82 NKFLSGKKDEITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG 158 (257)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence 9999876667999999999999999999999 8999999999999999999999999999997653222111 11222
Q ss_pred cccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhH
Q 001544 932 LATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFA 1010 (1057)
Q Consensus 932 ~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1057)
.++..|+|||......++.++|||||||++||+++ |+.||......+ ....+.... +..
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--------------~~~~~~~~~------~~~ 218 (257)
T cd05115 159 KWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE--------------VMSFIEQGK------RLD 218 (257)
T ss_pred CCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH--------------HHHHHHCCC------CCC
Confidence 33568999999888889999999999999999996 999986532111 111111110 111
Q ss_pred HHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHh
Q 001544 1011 AKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKI 1047 (1057)
Q Consensus 1011 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 1047 (1057)
.+..+++++.+++.+||..+|++||++.++.+.|+.+
T Consensus 219 ~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 219 CPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 1234567899999999999999999999999999865
No 127
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.9e-35 Score=324.20 Aligned_cols=254 Identities=26% Similarity=0.431 Sum_probs=197.5
Q ss_pred CCCCceeccccCeEEEEEEecC-Cc--EEEEEEeecc--chhHHHHHHHHHHHHHhcCCCCceeEeeeeccC------Ce
Q 001544 771 FSENNLIGRGSFGSVYIARLQN-GI--EVAVKTFDLQ--HERAFKSFDTECEVMKSIRHRNLTKIISSCSNE------DF 839 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 839 (1057)
|.+.++||+|+||.||+|.+.+ +. .||||.++.. .....+.+.+|++++++++||||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3456889999999999998654 33 6999988653 344567889999999999999999999986432 25
Q ss_pred eEEEEEEccCCChhHHHhc-----CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccc
Q 001544 840 KALILEYMRNGSLEKCLYS-----GNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFG 914 (1057)
Q Consensus 840 ~~lV~E~~~~gsL~~~l~~-----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 914 (1057)
.++||||+++|+|.+++.. ....+++..+..++.|++.|++||| +++|+||||||+||++++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCCC
Confidence 6899999999999988742 2245899999999999999999999 8999999999999999999999999999
Q ss_pred ccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhH
Q 001544 915 IAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISM 993 (1057)
Q Consensus 915 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 993 (1057)
+++.+.............+++.|+|||...+..++.++||||||+++|||++ |+.||...... . .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~------------~ 223 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS--E------------I 223 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH--H------------H
Confidence 9987633222112222345678999999988889999999999999999999 78887542111 0 0
Q ss_pred HHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHh
Q 001544 994 MKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKI 1047 (1057)
Q Consensus 994 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 1047 (1057)
.+.+.... .......++..+.+++.+||+.+|++|||+.|+++.|+++
T Consensus 224 ~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 224 YDYLRQGN------RLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred HHHHHcCC------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11111000 0011123566789999999999999999999999999875
No 128
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.4e-35 Score=324.59 Aligned_cols=255 Identities=25% Similarity=0.463 Sum_probs=205.1
Q ss_pred CCCCCceeccccCeEEEEEEec-CC---cEEEEEEeecc-chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NG---IEVAVKTFDLQ-HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
+|++.+.||+|+||.||+|... ++ ..||||.++.. ......+|..|++++++++||||+++++++.+++..++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 4678899999999999999864 33 36999998654 3445678999999999999999999999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
||+++|+|.+++......+++.+++.++.|++.|++||| +.+++||||||+||+++.++.+|++|||.+........
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~ 161 (269)
T cd05065 85 EFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 161 (269)
T ss_pred ecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCccccccccCcc
Confidence 999999999999876667899999999999999999999 89999999999999999999999999999876533221
Q ss_pred cccccccc---ccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcc
Q 001544 925 SMTQTQTL---ATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDAN 1000 (1057)
Q Consensus 925 ~~~~~~~~---~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1057)
........ .+..|+|||...+..++.++||||+||++||+++ |..||...... ....+ +...
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~--~~~~~------------i~~~ 227 (269)
T cd05065 162 DPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--DVINA------------IEQD 227 (269)
T ss_pred ccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH--HHHHH------------HHcC
Confidence 11111111 2457999999988899999999999999999886 99998652111 11111 1000
Q ss_pred cccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHh
Q 001544 1001 LLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKI 1047 (1057)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 1047 (1057)
...+.+..++..+.+++.+||..+|++||++.++++.|+++
T Consensus 228 ------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 228 ------YRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ------CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 01111234567789999999999999999999999998764
No 129
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=6.3e-36 Score=340.96 Aligned_cols=254 Identities=22% Similarity=0.282 Sum_probs=200.8
Q ss_pred HhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc---chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEE
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ---HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKAL 842 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 842 (1057)
..++|++.+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|+++++.++||||+++++++.+++..|+
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 3467999999999999999999865 5889999998642 22234567889999999999999999999999999999
Q ss_pred EEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCC
Q 001544 843 ILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 922 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 922 (1057)
||||+++|+|.+++... .+++.++..++.||+.||+||| +++|+||||||+||++++++.+||+|||++......
T Consensus 121 v~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~ 195 (370)
T cd05621 121 VMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET 195 (370)
T ss_pred EEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEEecccceecccC
Confidence 99999999999998654 3788999999999999999999 999999999999999999999999999999865322
Q ss_pred CCccccccccccccccCccccCCC----CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhh
Q 001544 923 DQSMTQTQTLATLGYMAPEYGREG----RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIID 998 (1057)
Q Consensus 923 ~~~~~~~~~~~t~~y~aPE~~~~~----~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1057)
. ........||+.|+|||++.+. .++.++||||+||++|||++|+.||...... . ....+.+
T Consensus 196 ~-~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~----~---------~~~~i~~ 261 (370)
T cd05621 196 G-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV----G---------TYSKIMD 261 (370)
T ss_pred C-ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH----H---------HHHHHHh
Confidence 1 1122345689999999988653 3788999999999999999999998652110 0 0111111
Q ss_pred cccccccchhhHHHHHHHHHHHHHHhHcccCCCCC--CCCHHHHHHH
Q 001544 999 ANLLITEDKHFAAKEQCASSVFNLAMECTVESPDE--RITAKEIVRR 1043 (1057)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~~ 1043 (1057)
.... ..++....++..+.+++..|+..+|.+ |+++.|+++|
T Consensus 262 ~~~~----~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 262 HKNS----LNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CCcc----cCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 1110 111112245677889999999865544 8899999988
No 130
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=9.1e-36 Score=336.47 Aligned_cols=252 Identities=24% Similarity=0.319 Sum_probs=199.4
Q ss_pred CCCCCceeccccCeEEEEEEe----cCCcEEEEEEeeccc----hhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCCee
Q 001544 770 GFSENNLIGRGSFGSVYIARL----QNGIEVAVKTFDLQH----ERAFKSFDTECEVMKSI-RHRNLTKIISSCSNEDFK 840 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 840 (1057)
+|++.+.||+|+||+||+|+. .+++.||+|++.... ....+.+.+|+++++++ +||+|+++++++.+.+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478889999999999999974 358899999986432 23346678899999999 599999999999999999
Q ss_pred EEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccccccccc
Q 001544 841 ALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLI 920 (1057)
Q Consensus 841 ~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 920 (1057)
++||||+++|+|.+++.... .+++.++..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.+.
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~ 156 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD-NFSEDEVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEECCCCCEEEeeCcCCcccc
Confidence 99999999999999987654 4889999999999999999999 9999999999999999999999999999998653
Q ss_pred CCCCccccccccccccccCccccCCC-CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhc
Q 001544 921 GEDQSMTQTQTLATLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDA 999 (1057)
Q Consensus 921 ~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1057)
.... .......||..|+|||++.+. .++.++||||+||++|||++|+.||........ ..... ..+...
T Consensus 157 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~~~--------~~~~~~ 226 (332)
T cd05614 157 SEEK-ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT-QSEVS--------RRILKC 226 (332)
T ss_pred ccCC-CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC-HHHHH--------HHHhcC
Confidence 2221 122234689999999998765 478899999999999999999999864211110 00000 000000
Q ss_pred ccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCC-----CHHHHHHH
Q 001544 1000 NLLITEDKHFAAKEQCASSVFNLAMECTVESPDERI-----TAKEIVRR 1043 (1057)
Q Consensus 1000 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 1043 (1057)
....+..++..+.+++.+|++.||++|| ++.++++|
T Consensus 227 --------~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 227 --------DPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred --------CCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 0011123567789999999999999999 78888876
No 131
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=5.3e-36 Score=335.85 Aligned_cols=242 Identities=25% Similarity=0.346 Sum_probs=194.9
Q ss_pred ceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCCeeEEEEEEccC
Q 001544 775 NLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSI-RHRNLTKIISSCSNEDFKALILEYMRN 849 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~~~~ 849 (1057)
+.||+|+||+||+|..+ +++.||||+++... ....+.+..|.+++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999865 68999999986432 23456677888888877 699999999999999999999999999
Q ss_pred CChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccc
Q 001544 850 GSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQT 929 (1057)
Q Consensus 850 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 929 (1057)
|+|.+++...+ .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++..... .....
T Consensus 81 g~L~~~i~~~~-~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~--~~~~~ 154 (320)
T cd05590 81 GDLMFHIQKSR-RFDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN--GKTTS 154 (320)
T ss_pred chHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC--CCccc
Confidence 99999887654 4899999999999999999999 999999999999999999999999999998753211 12223
Q ss_pred cccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhh
Q 001544 930 QTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHF 1009 (1057)
Q Consensus 930 ~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1057)
...||+.|+|||++.+..++.++||||+||++|||++|+.||...... . ..+.+.... .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-----~---------~~~~i~~~~-------~ 213 (320)
T cd05590 155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED-----D---------LFEAILNDE-------V 213 (320)
T ss_pred ccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH-----H---------HHHHHhcCC-------C
Confidence 456899999999999888999999999999999999999998652111 0 011110000 0
Q ss_pred HHHHHHHHHHHHHHhHcccCCCCCCCCH------HHHHHH
Q 001544 1010 AAKEQCASSVFNLAMECTVESPDERITA------KEIVRR 1043 (1057)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~Rps~------~evl~~ 1043 (1057)
..+..++.++.+++.+|++.||++||++ .++++|
T Consensus 214 ~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 214 VYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence 0112346678999999999999999998 666654
No 132
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=6e-36 Score=336.60 Aligned_cols=248 Identities=24% Similarity=0.331 Sum_probs=196.2
Q ss_pred ceeccccCeEEEEEEec-CCcEEEEEEeecc---chhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCCeeEEEEEEccC
Q 001544 775 NLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ---HERAFKSFDTECEVMKSI-RHRNLTKIISSCSNEDFKALILEYMRN 849 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~~~~ 849 (1057)
+.||+|+||+||+|... +++.||+|+++.. .......+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999865 6889999999753 233456678899988877 799999999999999999999999999
Q ss_pred CChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccc
Q 001544 850 GSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQT 929 (1057)
Q Consensus 850 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 929 (1057)
|+|..++.... .+++..+..++.|++.|++||| +++|+||||||+||+++.++.+||+|||+++..... .....
T Consensus 81 ~~L~~~~~~~~-~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~--~~~~~ 154 (329)
T cd05618 81 GDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP--GDTTS 154 (329)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCC--CCccc
Confidence 99998886554 5899999999999999999999 999999999999999999999999999998753221 11223
Q ss_pred cccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCccccccc---chhhhhhhccchhHHHhhhcccccccc
Q 001544 930 QTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEM---TLKHWVNDFLPISMMKIIDANLLITED 1006 (1057)
Q Consensus 930 ~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1057)
...||+.|+|||++.+..++.++||||+||++|||++|+.||........ ....+. .+.+...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~--------~~~i~~~------ 220 (329)
T cd05618 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL--------FQVILEK------ 220 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHH--------HHHHhcC------
Confidence 45689999999999999999999999999999999999999964221111 111111 1111000
Q ss_pred hhhHHHHHHHHHHHHHHhHcccCCCCCCCC------HHHHHHH
Q 001544 1007 KHFAAKEQCASSVFNLAMECTVESPDERIT------AKEIVRR 1043 (1057)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps------~~evl~~ 1043 (1057)
....+..++.++.+++.+|++.||++||+ +.|+++|
T Consensus 221 -~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 221 -QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred -CCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 01112345677889999999999999998 4677665
No 133
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.1e-35 Score=336.69 Aligned_cols=260 Identities=25% Similarity=0.412 Sum_probs=203.0
Q ss_pred CCCCCCceeccccCeEEEEEEe------cCCcEEEEEEeeccc-hhHHHHHHHHHHHHHhc-CCCCceeEeeeecc-CCe
Q 001544 769 NGFSENNLIGRGSFGSVYIARL------QNGIEVAVKTFDLQH-ERAFKSFDTECEVMKSI-RHRNLTKIISSCSN-EDF 839 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~~~ 839 (1057)
++|++.+.||+|+||+||+|.. .+++.||||+++... ......+.+|++++.++ +||||+++++++.. +..
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 4788999999999999999963 347899999996543 33456788999999999 68999999998765 456
Q ss_pred eEEEEEEccCCChhHHHhcCC-----------------------------------------------------------
Q 001544 840 KALILEYMRNGSLEKCLYSGN----------------------------------------------------------- 860 (1057)
Q Consensus 840 ~~lV~E~~~~gsL~~~l~~~~----------------------------------------------------------- 860 (1057)
.++||||+++|+|.+++....
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 166 (343)
T ss_pred eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence 789999999999999886432
Q ss_pred -------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccccccc
Q 001544 861 -------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA 933 (1057)
Q Consensus 861 -------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 933 (1057)
..+++.++..++.|+++|++||| +++|+||||||+||++++++.+|++|||++................+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd05103 167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL 243 (343)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCC
Confidence 23678888999999999999999 99999999999999999999999999999986533222222223345
Q ss_pred cccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHHH
Q 001544 934 TLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAK 1012 (1057)
Q Consensus 934 t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1057)
+..|+|||...+..++.++||||||+++|||++ |..||......+. ......... ....+
T Consensus 244 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-------------~~~~~~~~~------~~~~~ 304 (343)
T cd05103 244 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-------------FCRRLKEGT------RMRAP 304 (343)
T ss_pred CcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH-------------HHHHHhccC------CCCCC
Confidence 678999999988889999999999999999997 8888765221110 001110000 00111
Q ss_pred HHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHHH
Q 001544 1013 EQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRDF 1050 (1057)
Q Consensus 1013 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 1050 (1057)
...++++.+++.+||+.+|++||++.|++++|+.+.+.
T Consensus 305 ~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 305 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 22456789999999999999999999999999988653
No 134
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=6.8e-36 Score=336.33 Aligned_cols=248 Identities=23% Similarity=0.314 Sum_probs=197.1
Q ss_pred ceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCCeeEEEEEEccC
Q 001544 775 NLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSI-RHRNLTKIISSCSNEDFKALILEYMRN 849 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~~~~ 849 (1057)
++||+|+||+||+|+.. +++.||||+++... ......+.+|..++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999865 68999999997532 23446688899999998 699999999999999999999999999
Q ss_pred CChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccc
Q 001544 850 GSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQT 929 (1057)
Q Consensus 850 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 929 (1057)
|+|.+++...+ .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++..... .....
T Consensus 81 g~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--~~~~~ 154 (329)
T cd05588 81 GDLMFHMQRQR-KLPEEHARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP--GDTTS 154 (329)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCccccccccC--CCccc
Confidence 99998886554 5899999999999999999999 999999999999999999999999999998743211 12223
Q ss_pred cccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccc---cchhhhhhhccchhHHHhhhcccccccc
Q 001544 930 QTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGE---MTLKHWVNDFLPISMMKIIDANLLITED 1006 (1057)
Q Consensus 930 ~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1057)
...||+.|+|||++.+..++.++|+||+||++|||++|+.||+.....+ .....+. .+.+....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~--------~~~~~~~~----- 221 (329)
T cd05588 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYL--------FQVILEKQ----- 221 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHH--------HHHHHcCC-----
Confidence 4568999999999999899999999999999999999999996422111 1111111 11110000
Q ss_pred hhhHHHHHHHHHHHHHHhHcccCCCCCCCC------HHHHHHH
Q 001544 1007 KHFAAKEQCASSVFNLAMECTVESPDERIT------AKEIVRR 1043 (1057)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps------~~evl~~ 1043 (1057)
...+..++.++.+++.+|++.||.+||+ +.|+++|
T Consensus 222 --~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 222 --IRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred --CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 0111235667899999999999999997 6787765
No 135
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.8e-35 Score=323.25 Aligned_cols=256 Identities=26% Similarity=0.461 Sum_probs=205.7
Q ss_pred CCCCCCceeccccCeEEEEEEec----CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ----NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALI 843 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 843 (1057)
.+|++.+.||+|+||.||+|... .+..||+|.++... ....+.+.+|+.++++++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46788899999999999999753 23479999986543 34457889999999999999999999999999999999
Q ss_pred EEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC
Q 001544 844 LEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 923 (1057)
|||+++++|.+++......+++.++..++.|++.|++||| +.+++||||||+||+++.++.++++|||++..+....
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd05066 84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 160 (267)
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence 9999999999999877667899999999999999999999 9999999999999999999999999999998763322
Q ss_pred Ccc-ccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhccc
Q 001544 924 QSM-TQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANL 1001 (1057)
Q Consensus 924 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1057)
... ......++..|+|||.+.+..++.++||||||+++||+++ |..||......+ ... .+.+.
T Consensus 161 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~--~~~-----------~~~~~-- 225 (267)
T cd05066 161 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD--VIK-----------AIEEG-- 225 (267)
T ss_pred ceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH--HHH-----------HHhCC--
Confidence 111 1111223567999999988889999999999999999887 999986522110 000 01100
Q ss_pred ccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHh
Q 001544 1002 LITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKI 1047 (1057)
Q Consensus 1002 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 1047 (1057)
.+.+....++..+.+++.+|++.+|++||++.++++.|+++
T Consensus 226 -----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 226 -----YRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred -----CcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 00111123567789999999999999999999999999875
No 136
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.6e-35 Score=330.98 Aligned_cols=268 Identities=21% Similarity=0.294 Sum_probs=202.6
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
++|...+.||+|+||+||+|+.+ +++.||+|+++... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 57888999999999999999865 68899999986443 22334677899999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 847 MRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
+++ ++.+++......+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++...... .
T Consensus 86 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--~ 159 (309)
T cd07872 86 LDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT--K 159 (309)
T ss_pred CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECccccceecCCCc--c
Confidence 975 888888776666899999999999999999999 9999999999999999999999999999987542221 1
Q ss_pred ccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhc--cchhHHHhhh-----
Q 001544 927 TQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDF--LPISMMKIID----- 998 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~----- 998 (1057)
......++..|+|||.+.+ ..++.++||||+||++|||++|+.||......+. ........ ........+.
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07872 160 TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDE-LHLIFRLLGTPTEETWPGISSNDEF 238 (309)
T ss_pred ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHHHHhhhcchhhh
Confidence 2233457889999998764 4688999999999999999999999865322111 10000000 0000000000
Q ss_pred --cccc-cccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 999 --ANLL-ITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 999 --~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.... ............++.++.+++.+|++.||++|||+.|+++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 239 KNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred hhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 0000 00000111123456788999999999999999999999985
No 137
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.7e-35 Score=322.22 Aligned_cols=252 Identities=29% Similarity=0.495 Sum_probs=202.7
Q ss_pred CCCCCCceeccccCeEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEcc
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMR 848 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 848 (1057)
++|++.+.||+|+||.||+|..+++..||+|.++.... ..+++.+|++++++++|++++++++++.+ +..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~ 83 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTEYMS 83 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEEecC
Confidence 46888899999999999999988888999999865433 34678999999999999999999998854 55789999999
Q ss_pred CCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccc
Q 001544 849 NGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT 927 (1057)
Q Consensus 849 ~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 927 (1057)
+++|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+||++++++.++++|||.+..+.... ...
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~-~~~ 159 (260)
T cd05070 84 KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE-YTA 159 (260)
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceeeeeccCcc-ccc
Confidence 999999987643 45899999999999999999999 8999999999999999999999999999998653221 111
Q ss_pred cccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccccccc
Q 001544 928 QTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITED 1006 (1057)
Q Consensus 928 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1057)
.....++..|+|||...+..++.++|+||||+++|||++ |..||......+ ..+.+....
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--------------~~~~~~~~~----- 220 (260)
T cd05070 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE--------------VLEQVERGY----- 220 (260)
T ss_pred ccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH--------------HHHHHHcCC-----
Confidence 122234567999999888889999999999999999999 888886521110 011111100
Q ss_pred hhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHH
Q 001544 1007 KHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLK 1046 (1057)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1046 (1057)
..+.+...+.++.+++.+|+..+|++|||+.++.+.|++
T Consensus 221 -~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 221 -RMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred -CCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 111123456779999999999999999999999998875
No 138
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.5e-35 Score=339.21 Aligned_cols=258 Identities=25% Similarity=0.412 Sum_probs=204.3
Q ss_pred CCCCCCceeccccCeEEEEEEec------CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcC-CCCceeEeeeeccCCee
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ------NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIR-HRNLTKIISSCSNEDFK 840 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~ 840 (1057)
++|.+.+.||+|+||.||+|++. .++.||||+++... ....+.+.+|++++.++. ||||+++++++...+..
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~ 116 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPI 116 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCc
Confidence 45777899999999999999853 34689999996542 333457889999999997 99999999999999999
Q ss_pred EEEEEEccCCChhHHHhcCC------------------------------------------------------------
Q 001544 841 ALILEYMRNGSLEKCLYSGN------------------------------------------------------------ 860 (1057)
Q Consensus 841 ~lV~E~~~~gsL~~~l~~~~------------------------------------------------------------ 860 (1057)
++||||+++|+|.++++..+
T Consensus 117 ~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (401)
T cd05107 117 YIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMK 196 (401)
T ss_pred EEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcch
Confidence 99999999999999986532
Q ss_pred -------------------------------------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC
Q 001544 861 -------------------------------------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD 903 (1057)
Q Consensus 861 -------------------------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~ 903 (1057)
..+++..+..++.|++.||+||| +.+|+||||||+||+++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrdlkp~NiLl~ 273 (401)
T cd05107 197 GTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAARNVLIC 273 (401)
T ss_pred hhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCcCcccCCcceEEEe
Confidence 13577788999999999999999 99999999999999999
Q ss_pred CCCcEEEEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchh
Q 001544 904 DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLK 982 (1057)
Q Consensus 904 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~ 982 (1057)
+++.+|++|||+++...............++..|+|||.+....++.++|||||||++|||++ |+.||......+.
T Consensus 274 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~--- 350 (401)
T cd05107 274 EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ--- 350 (401)
T ss_pred CCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH---
Confidence 999999999999986532222112222346778999999988889999999999999999998 8888865321111
Q ss_pred hhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhH
Q 001544 983 HWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIR 1048 (1057)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~ 1048 (1057)
..+.+.... +...+..++.++.+++.+||..+|++||+++|+++.|+++.
T Consensus 351 ----------~~~~~~~~~------~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 351 ----------FYNAIKRGY------RMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred ----------HHHHHHcCC------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 011111110 01112235678999999999999999999999999998763
No 139
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.2e-35 Score=321.48 Aligned_cols=253 Identities=28% Similarity=0.474 Sum_probs=203.4
Q ss_pred CCCCCCceeccccCeEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEcc
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMR 848 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 848 (1057)
++|++.++||+|+||.||+|+..++..||+|+++.... ..+.+.+|++++++++||||+++++++.+ +..++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~ 83 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 83 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcCC
Confidence 46889999999999999999887777899999875332 34678899999999999999999998754 55789999999
Q ss_pred CCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccc
Q 001544 849 NGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT 927 (1057)
Q Consensus 849 ~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 927 (1057)
+|+|.+++.... ..+++.++..++.|+++||+|+| +.+++||||||+||++++++.+||+|||.++.+..... ..
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~-~~ 159 (262)
T cd05071 84 KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TA 159 (262)
T ss_pred CCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCCceeecccccc-cc
Confidence 999999997633 45899999999999999999999 99999999999999999999999999999976532221 12
Q ss_pred cccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccccccc
Q 001544 928 QTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITED 1006 (1057)
Q Consensus 928 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1057)
.....++..|+|||+..+..++.++||||||+++|||++ |..||......+ ....+....
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~--------------~~~~~~~~~----- 220 (262)
T cd05071 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--------------VLDQVERGY----- 220 (262)
T ss_pred ccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH--------------HHHHHhcCC-----
Confidence 223345678999999988889999999999999999999 777876521110 111111100
Q ss_pred hhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHh
Q 001544 1007 KHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKI 1047 (1057)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 1047 (1057)
..+....++..+.+++.+|++.+|++||++.++++.|++.
T Consensus 221 -~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 221 -RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred -CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 0111234567889999999999999999999999998864
No 140
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=2e-35 Score=327.91 Aligned_cols=262 Identities=26% Similarity=0.417 Sum_probs=201.4
Q ss_pred CCCCCCceeccccCeEEEEEEecC---------------CcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEee
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQN---------------GIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIIS 832 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~ 832 (1057)
.+|++.+.||+|+||.||+|.... ...||||.++... ......+.+|++++++++|||++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 478889999999999999986532 2358999986542 334567899999999999999999999
Q ss_pred eeccCCeeEEEEEEccCCChhHHHhcCC-----------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCee
Q 001544 833 SCSNEDFKALILEYMRNGSLEKCLYSGN-----------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVL 901 (1057)
Q Consensus 833 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~-----------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nil 901 (1057)
++...+..++||||+++++|.+++.... ..+++.++..++.|+++|++||| +.+++||||||+||+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH---hcCeeccccChhhEE
Confidence 9999999999999999999999886532 23688899999999999999999 999999999999999
Q ss_pred eCCCCcEEEEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh--CCCCCCccccccc
Q 001544 902 LDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT--RRKPTDEIFSGEM 979 (1057)
Q Consensus 902 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt--g~~p~~~~~~~~~ 979 (1057)
+++++.+|++|||++................++..|+|||...++.++.++|||||||++|||++ |..||......+
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~- 240 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ- 240 (295)
T ss_pred EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH-
Confidence 99999999999999976533222222223345678999999988889999999999999999998 556665421111
Q ss_pred chhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHH
Q 001544 980 TLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLK 1046 (1057)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1046 (1057)
..... .+..+..... ........++..+.+++.+|++.+|++||++.++++.|++
T Consensus 241 ~~~~~---------~~~~~~~~~~---~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 241 VIENT---------GEFFRNQGRQ---IYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred HHHHH---------HHhhhhcccc---ccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 00000 0000000000 0001112346789999999999999999999999998863
No 141
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=8.7e-36 Score=328.93 Aligned_cols=254 Identities=25% Similarity=0.401 Sum_probs=202.5
Q ss_pred CCCCCceeccccCeEEEEEEec------CCcEEEEEEeeccch-hHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ------NGIEVAVKTFDLQHE-RAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKAL 842 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 842 (1057)
+|++.+.||+|+||+||+|... ++..||||+++.... .....+.+|+.++++++||||+++++++.+.+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 4666788999999999999753 257899999975433 335678899999999999999999999999999999
Q ss_pred EEEEccCCChhHHHhcC---------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc
Q 001544 843 ILEYMRNGSLEKCLYSG---------------NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMV 907 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 907 (1057)
++||+.+++|.+++... ...+++..+..++.|++.||+|+| +++|+||||||+||++++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS---SHHVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HcCccccccchhheEecCCCc
Confidence 99999999999988532 134788889999999999999999 999999999999999999999
Q ss_pred EEEEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhh
Q 001544 908 AHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVN 986 (1057)
Q Consensus 908 ~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~ 986 (1057)
+||+|||+++...............+++.|+|||.+.++.++.++||||+||++|||++ |..||...... ++..
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-----~~~~ 237 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ-----DVIE 237 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHH
Confidence 99999999886533322222233445778999999988889999999999999999998 77787542111 1110
Q ss_pred hccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHH
Q 001544 987 DFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLK 1046 (1057)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1046 (1057)
.+.+.. ..+.+..++..+.+++.+||+.+|++||++.|+++.|+.
T Consensus 238 --------~i~~~~-------~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 238 --------MIRNRQ-------VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred --------HHHcCC-------cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 111100 011123567789999999999999999999999999874
No 142
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-35 Score=329.68 Aligned_cols=251 Identities=25% Similarity=0.354 Sum_probs=211.5
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccch---hHHHHHHHHHHHHHhcC-CCCceeEeeeeccCCeeEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHE---RAFKSFDTECEVMKSIR-HRNLTKIISSCSNEDFKAL 842 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 842 (1057)
...|+..+.||+|.||.||+++.+ +|+.+|+|++.+... .....+.+|+++|+++. |||||.+.+.|++.+..++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 456888899999999999999866 599999999965543 24578999999999998 9999999999999999999
Q ss_pred EEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC----CCcEEEEccccccc
Q 001544 843 ILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD----NMVAHLSDFGIAKL 918 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~----~~~~kl~Dfg~a~~ 918 (1057)
|||+++||.|.+.+... . +++..+..++.|++.+++||| +.+|+|||+||+|+|+.. ++.+|++|||++.+
T Consensus 114 vmEL~~GGeLfd~i~~~-~-~sE~da~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~ 188 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK-H-YSERDAAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKF 188 (382)
T ss_pred EEEecCCchHHHHHHHc-c-CCHHHHHHHHHHHHHHHHHHH---hCCceeccCCHHHeeeccccCCCCcEEEeeCCCceE
Confidence 99999999999998776 3 999999999999999999999 999999999999999963 35799999999998
Q ss_pred ccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhh
Q 001544 919 LIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIID 998 (1057)
Q Consensus 919 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1057)
..+ .......+||+.|+|||++....++.++||||+||++|.|++|.+||......+... .+..
T Consensus 189 ~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-------------~i~~ 252 (382)
T KOG0032|consen 189 IKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-------------AILR 252 (382)
T ss_pred ccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-------------HHHc
Confidence 743 445566789999999999999999999999999999999999999997632221111 1111
Q ss_pred cccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 999 ANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
... ....+.+..++..+.+++..|+..||.+|+|+.++++|
T Consensus 253 ~~~----~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 253 GDF----DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred CCC----CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 111 11222334567889999999999999999999999997
No 143
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=8.3e-36 Score=333.61 Aligned_cols=242 Identities=22% Similarity=0.325 Sum_probs=191.7
Q ss_pred ceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCCeeEEEEEEccC
Q 001544 775 NLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSI-RHRNLTKIISSCSNEDFKALILEYMRN 849 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~~~~ 849 (1057)
++||+|+||+||+|+.. +++.||||+++... ....+.+..|.+++... +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999865 58899999997542 22344556677777654 899999999999999999999999999
Q ss_pred CChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccc
Q 001544 850 GSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQT 929 (1057)
Q Consensus 850 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 929 (1057)
|+|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~~~~ 154 (316)
T cd05592 81 GDLMFHIQSSG-RFDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--GKAS 154 (316)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--Cccc
Confidence 99999887654 5899999999999999999999 8999999999999999999999999999997542221 2233
Q ss_pred cccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhh
Q 001544 930 QTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHF 1009 (1057)
Q Consensus 930 ~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1057)
...||+.|+|||++.+..++.++||||+||++|||++|+.||...... . ....+.... .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~-----~---------~~~~i~~~~-------~ 213 (316)
T cd05592 155 TFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED-----E---------LFDSILNDR-------P 213 (316)
T ss_pred cccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH-----H---------HHHHHHcCC-------C
Confidence 456899999999999888999999999999999999999998652111 0 000000000 0
Q ss_pred HHHHHHHHHHHHHHhHcccCCCCCCCCHH-HHHHH
Q 001544 1010 AAKEQCASSVFNLAMECTVESPDERITAK-EIVRR 1043 (1057)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~-evl~~ 1043 (1057)
..+..++.++.+++.+||+.+|++||++. ++++|
T Consensus 214 ~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05592 214 HFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQH 248 (316)
T ss_pred CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence 01123456788999999999999999875 55543
No 144
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=9.6e-36 Score=334.75 Aligned_cols=247 Identities=23% Similarity=0.304 Sum_probs=197.6
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCC-CCceeEeeeeccCCeeEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRH-RNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lV~ 844 (1057)
+|++.+.||+|+||.||+|... +++.||||+++... ....+.+..|++++..++| ++|+++++++.+.+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788899999999999999865 57899999996532 3345677889999999976 56888999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
||+++|+|.+++.... .+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~-- 154 (324)
T cd05587 81 EYVNGGDLMYHIQQVG-KFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG-- 154 (324)
T ss_pred cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC--
Confidence 9999999999887654 4889999999999999999999 999999999999999999999999999998743211
Q ss_pred ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccc
Q 001544 925 SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLIT 1004 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1057)
........||+.|+|||++.+..++.++||||+||++|||++|+.||......+. ...+....
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~-------------~~~i~~~~---- 217 (324)
T cd05587 155 GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL-------------FQSIMEHN---- 217 (324)
T ss_pred CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH-------------HHHHHcCC----
Confidence 1122345689999999999998999999999999999999999999865211100 01111100
Q ss_pred cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCH-----HHHHHH
Q 001544 1005 EDKHFAAKEQCASSVFNLAMECTVESPDERITA-----KEIVRR 1043 (1057)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~evl~~ 1043 (1057)
...+..++.++.+++.+|+..||.+|++. .++.+|
T Consensus 218 ----~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 218 ----VSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred ----CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 01112356678899999999999999976 666655
No 145
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-36 Score=326.61 Aligned_cols=255 Identities=28% Similarity=0.444 Sum_probs=215.4
Q ss_pred CCCCCCceeccccCeEEEEEEecC-CcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQN-GIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
.+..+.++||-|.||.||.|.|+. .-.||||.++. +....++|.+|+.+|+.++|||+|+++|.|..+-..|||+|||
T Consensus 267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE-DtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM 345 (1157)
T KOG4278|consen 267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFM 345 (1157)
T ss_pred hheeeeeccCCCcccceeeeeeeccceeeehhhhhh-cchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecc
Confidence 355677899999999999999874 56799999863 4455689999999999999999999999999999999999999
Q ss_pred cCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 848 RNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 848 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
..|+|.+++++.. ..++.--.+.++.||+.|++||. .+.+|||||.++|.|+.++..+||+|||+++.+.++. +.
T Consensus 346 ~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDT-YT 421 (1157)
T KOG4278|consen 346 CYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDT-YT 421 (1157)
T ss_pred cCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeeccchhhhhcCCc-ee
Confidence 9999999998765 44666677899999999999999 9999999999999999999999999999999985443 33
Q ss_pred ccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhccccccc
Q 001544 927 TQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITE 1005 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1057)
.+........|.|||-+....++.|+|||+|||++||+.| |..||....-. .+.+.. +.
T Consensus 422 AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS--------------qVY~LL------Ek 481 (1157)
T KOG4278|consen 422 AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------------QVYGLL------EK 481 (1157)
T ss_pred cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH--------------HHHHHH------hc
Confidence 3333445678999999999999999999999999999999 66676542111 122222 33
Q ss_pred chhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhH
Q 001544 1006 DKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIR 1048 (1057)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~ 1048 (1057)
+.+...++.|++.++++|+.||+..|.+||+++|+-+.++.+.
T Consensus 482 gyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 482 GYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred cccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 4456667889999999999999999999999999999998874
No 146
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2.7e-35 Score=353.18 Aligned_cols=259 Identities=25% Similarity=0.328 Sum_probs=203.6
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc---chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ---HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
++|++.++||+|+||.||+|... +|+.||||+++.. .....+++.+|++++++++||||+++++++.+++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 47889999999999999999865 6899999998643 2334567899999999999999999999999999999999
Q ss_pred EEccCCChhHHHhcC----------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccc
Q 001544 845 EYMRNGSLEKCLYSG----------NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFG 914 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 914 (1057)
||++||+|.+++... ....++.++++++.||++||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCCchheEEEcCCCCEEEEecC
Confidence 999999999988642 123567788999999999999999 8999999999999999999999999999
Q ss_pred ccccccCCCC----------------ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccc
Q 001544 915 IAKLLIGEDQ----------------SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGE 978 (1057)
Q Consensus 915 ~a~~~~~~~~----------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~ 978 (1057)
+++....... ........||+.|+|||.+.+..++.++||||+||++|||+||+.||......+
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9986521110 001112468999999999999999999999999999999999999986521111
Q ss_pred cchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCC-CHHHHHHHHHHhH
Q 001544 979 MTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERI-TAKEIVRRLLKIR 1048 (1057)
Q Consensus 979 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~evl~~L~~i~ 1048 (1057)
...... ..+ .........+++.+.+++.+|++.||++|| ++.++.+.|+...
T Consensus 239 i~~~~~-----------i~~-------P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~l 291 (932)
T PRK13184 239 ISYRDV-----------ILS-------PIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHL 291 (932)
T ss_pred hhhhhh-----------ccC-------hhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 100000 000 000011124567789999999999999997 5666777776653
No 147
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.1e-35 Score=324.85 Aligned_cols=245 Identities=21% Similarity=0.321 Sum_probs=195.7
Q ss_pred eccccCeEEEEEEec-CCcEEEEEEeeccch---hHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCCCh
Q 001544 777 IGRGSFGSVYIARLQ-NGIEVAVKTFDLQHE---RAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNGSL 852 (1057)
Q Consensus 777 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL 852 (1057)
||+|+||+||+|... +++.||||.+..... ...+.+..|++++++++||||+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999765 689999999864322 2345678899999999999999999999999999999999999999
Q ss_pred hHHHhc---CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccc
Q 001544 853 EKCLYS---GNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQT 929 (1057)
Q Consensus 853 ~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 929 (1057)
.+.+.. ....+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||.+....... ....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~--~~~~ 155 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ--SKTK 155 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC--cccc
Confidence 987753 2346899999999999999999999 9999999999999999999999999999997653221 1223
Q ss_pred cccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhh
Q 001544 930 QTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHF 1009 (1057)
Q Consensus 930 ~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1057)
...|++.|+|||++.+..++.++||||+||++|||++|+.||....... ...... ...... ..
T Consensus 156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~--------~~~~~~--------~~ 218 (280)
T cd05608 156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELK--------QRILND--------SV 218 (280)
T ss_pred ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-hHHHHH--------Hhhccc--------CC
Confidence 3468899999999999999999999999999999999999986521110 000000 000000 01
Q ss_pred HHHHHHHHHHHHHHhHcccCCCCCCC-----CHHHHHHH
Q 001544 1010 AAKEQCASSVFNLAMECTVESPDERI-----TAKEIVRR 1043 (1057)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 1043 (1057)
..+..++.++.+++.+|++.||++|| ++.|+++|
T Consensus 219 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 219 TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 11234567889999999999999999 77888876
No 148
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=7.2e-36 Score=335.30 Aligned_cols=242 Identities=24% Similarity=0.333 Sum_probs=195.4
Q ss_pred ceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCCeeEEEEEEccC
Q 001544 775 NLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSI-RHRNLTKIISSCSNEDFKALILEYMRN 849 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~~~~ 849 (1057)
++||+|+||.||+|+.. +++.||||+++... ....+.+..|.+++..+ +||||+++++++...+..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999865 58899999996532 23445677888998866 799999999999999999999999999
Q ss_pred CChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccc
Q 001544 850 GSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQT 929 (1057)
Q Consensus 850 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 929 (1057)
|+|..++.... .+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++..... .....
T Consensus 81 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~--~~~~~ 154 (321)
T cd05591 81 GDLMFQIQRSR-KFDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN--GVTTT 154 (321)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceecccC--Ccccc
Confidence 99999887654 4889999999999999999999 999999999999999999999999999998754221 12223
Q ss_pred cccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhh
Q 001544 930 QTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHF 1009 (1057)
Q Consensus 930 ~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1057)
...||+.|+|||++.+..++.++||||+||++|||++|+.||......+ . ...+.....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~-----~--------~~~i~~~~~-------- 213 (321)
T cd05591 155 TFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD-----L--------FESILHDDV-------- 213 (321)
T ss_pred ccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH-----H--------HHHHHcCCC--------
Confidence 4568999999999998899999999999999999999999986521110 0 001110000
Q ss_pred HHHHHHHHHHHHHHhHcccCCCCCCC-------CHHHHHHH
Q 001544 1010 AAKEQCASSVFNLAMECTVESPDERI-------TAKEIVRR 1043 (1057)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~Rp-------s~~evl~~ 1043 (1057)
..+..++.++.+++.+|++.||++|| ++.++++|
T Consensus 214 ~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 214 LYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 01122456788999999999999999 88888876
No 149
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=4.5e-35 Score=320.31 Aligned_cols=258 Identities=24% Similarity=0.369 Sum_probs=208.8
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc---chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ---HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
++|++.+.||+|+||.||+|... +|+.||+|.++.. .....+.+.+|++++++++|+|++++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57888999999999999999876 7999999988532 2334678899999999999999999999999999999999
Q ss_pred EEccCCChhHHHhc---CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccC
Q 001544 845 EYMRNGSLEKCLYS---GNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIG 921 (1057)
Q Consensus 845 E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 921 (1057)
||+++|+|.+++.. ....+++.++..++.|+++|++||| +.+|+||||+|+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 99999999998864 2345899999999999999999999 99999999999999999999999999999876532
Q ss_pred CCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccc
Q 001544 922 EDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANL 1001 (1057)
Q Consensus 922 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1057)
.. .......++..|+|||...+..++.++||||+||++|||++|+.||.... .....+. +......
T Consensus 159 ~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~---------~~~~~~~ 224 (267)
T cd08224 159 KT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYSLC---------KKIEKCD 224 (267)
T ss_pred CC--cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC---ccHHHHH---------hhhhcCC
Confidence 21 12223457888999999988889999999999999999999999985421 1111110 0010000
Q ss_pred ccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhH
Q 001544 1002 LITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIR 1048 (1057)
Q Consensus 1002 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~ 1048 (1057)
. . .. ..+.++..+.+++.+||..+|++||++.++++.+++++
T Consensus 225 ~---~-~~-~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 225 Y---P-PL-PADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred C---C-CC-ChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 0 0 00 01245667899999999999999999999999999875
No 150
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=2.9e-35 Score=327.08 Aligned_cols=263 Identities=25% Similarity=0.426 Sum_probs=205.2
Q ss_pred hCCCCCCceeccccCeEEEEEEecC-----------------CcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCcee
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQN-----------------GIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTK 829 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~ 829 (1057)
..+|++.+.||+|+||.||+|.... +..||+|.+.... ....+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3578889999999999999997542 2468999986543 345678899999999999999999
Q ss_pred EeeeeccCCeeEEEEEEccCCChhHHHhcCC----------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCC
Q 001544 830 IISSCSNEDFKALILEYMRNGSLEKCLYSGN----------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSN 899 (1057)
Q Consensus 830 l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~----------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N 899 (1057)
+++++..++..++||||+++++|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH---~~~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE---SLNFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH---HcCccccccchhc
Confidence 9999999999999999999999999987644 25899999999999999999999 8999999999999
Q ss_pred eeeCCCCcEEEEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh--CCCCCCccccc
Q 001544 900 VLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT--RRKPTDEIFSG 977 (1057)
Q Consensus 900 ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt--g~~p~~~~~~~ 977 (1057)
|+++.++.++++|||+++...............++..|+|||...+..++.++|||||||++|||++ |..||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ 240 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH
Confidence 9999999999999999976533322222334456778999999988889999999999999999998 66776542111
Q ss_pred ccchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHH
Q 001544 978 EMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLK 1046 (1057)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1046 (1057)
+ .+ .... ...... ......+.+..++.++.+++.+|++.||++||++.|+++.|++
T Consensus 241 ~-~~-~~~~--------~~~~~~---~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 241 Q-VI-ENAG--------HFFRDD---GRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred H-HH-HHHH--------hccccc---cccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 0 00 0000 000000 0000011122345789999999999999999999999998863
No 151
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=9.9e-36 Score=342.64 Aligned_cols=252 Identities=22% Similarity=0.327 Sum_probs=197.8
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
.|+..++||+|+||+||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++.+++..|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5788999999999999999854 68899999986532 3345678899999999999999999999999999999999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC-
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ- 924 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~- 924 (1057)
|+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.+.....
T Consensus 82 ~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~ 157 (382)
T cd05625 82 YIPGGDMMSLLIRMG-IFPEDLARFYIAELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (382)
T ss_pred CCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccc
Confidence 999999999987654 5788899999999999999999 99999999999999999999999999999753210000
Q ss_pred --------------------------------------------ccccccccccccccCccccCCCCCCccchHHHHHHH
Q 001544 925 --------------------------------------------SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGIL 960 (1057)
Q Consensus 925 --------------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~i 960 (1057)
........||+.|+|||++.+..++.++||||+||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi 237 (382)
T cd05625 158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 237 (382)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence 000112368999999999998899999999999999
Q ss_pred HHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCC---H
Q 001544 961 LMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERIT---A 1037 (1057)
Q Consensus 961 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps---~ 1037 (1057)
+|||++|+.||......+. ...+.... .....+.....++++.+++.+|+ .+|++|++ +
T Consensus 238 l~elltG~~Pf~~~~~~~~-------------~~~i~~~~----~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~ 299 (382)
T cd05625 238 LYEMLVGQPPFLAQTPLET-------------QMKVINWQ----TSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGA 299 (382)
T ss_pred HHHHHhCCCCCCCCCHHHH-------------HHHHHccC----CCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCH
Confidence 9999999999865211110 01111000 00011111234567788888876 59999997 8
Q ss_pred HHHHHH
Q 001544 1038 KEIVRR 1043 (1057)
Q Consensus 1038 ~evl~~ 1043 (1057)
.|+++|
T Consensus 300 ~ei~~h 305 (382)
T cd05625 300 DEIKAH 305 (382)
T ss_pred HHHhcC
Confidence 888876
No 152
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=3.8e-35 Score=320.13 Aligned_cols=252 Identities=25% Similarity=0.377 Sum_probs=203.3
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc-----hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH-----ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKAL 842 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 842 (1057)
++|+..+.||+|++|.||+|... ++++||+|++.... ....+.+.+|++++++++||||+++++++.+++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 46888999999999999999854 68999999986432 1234678899999999999999999999999999999
Q ss_pred EEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCC
Q 001544 843 ILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 922 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 922 (1057)
|+||+++++|.+++.... .+++..+..++.|++.|++||| +.+++||||+|+||++++++.++|+|||.++.....
T Consensus 82 v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~ 157 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG-ALTETVTRKYTRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 157 (263)
T ss_pred EEEECCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecccc
Confidence 999999999999887654 4888999999999999999999 999999999999999999999999999999765322
Q ss_pred CCcc-ccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccc
Q 001544 923 DQSM-TQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANL 1001 (1057)
Q Consensus 923 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1057)
.... ......++..|+|||...+..++.++||||+|+++|||++|+.||......+. .......
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-------------~~~~~~~-- 222 (263)
T cd06625 158 CSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA-------------IFKIATQ-- 222 (263)
T ss_pred ccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH-------------HHHHhcc--
Confidence 1111 11234577899999999988899999999999999999999999865211100 0000000
Q ss_pred ccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1002 LITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1002 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
......+..++.++.+++.+||..+|++||++.|++++
T Consensus 223 ----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 223 ----PTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ----CCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 00111223456778999999999999999999999876
No 153
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.6e-35 Score=322.39 Aligned_cols=256 Identities=26% Similarity=0.476 Sum_probs=205.7
Q ss_pred CCCCCCceeccccCeEEEEEEec-CC---cEEEEEEeecc-chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NG---IEVAVKTFDLQ-HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALI 843 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 843 (1057)
++|+..+.||+|+||.||+|... ++ ..||+|.++.. .....+.+..|++++++++|||++++.+++...+..++|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence 46778899999999999999865 33 37999998654 234457789999999999999999999999999999999
Q ss_pred EEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC
Q 001544 844 LEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 923 (1057)
|||+++++|.+++......+++.++..++.|++.|++||| +.+++||||||+||++++++.+|++|||++.......
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 161 (268)
T cd05063 85 TEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDP 161 (268)
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCccceeccccc
Confidence 9999999999999876667899999999999999999999 8999999999999999999999999999997653222
Q ss_pred Cccc-cccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhccc
Q 001544 924 QSMT-QTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANL 1001 (1057)
Q Consensus 924 ~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1057)
.... ......+..|+|||++....++.++|||||||++||+++ |+.||...... . ....+...
T Consensus 162 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~-----~---------~~~~i~~~- 226 (268)
T cd05063 162 EGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH-----E---------VMKAINDG- 226 (268)
T ss_pred ccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH-----H---------HHHHHhcC-
Confidence 1111 111223457999999988889999999999999999998 99998542111 1 11111110
Q ss_pred ccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHh
Q 001544 1002 LITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKI 1047 (1057)
Q Consensus 1002 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 1047 (1057)
...+....++.++.+++.+||+.+|++||++.++++.|+++
T Consensus 227 -----~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 227 -----FRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred -----CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 01111234567889999999999999999999999999875
No 154
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.9e-35 Score=328.82 Aligned_cols=257 Identities=26% Similarity=0.402 Sum_probs=205.5
Q ss_pred CCCCCCceeccccCeEEEEEEec------CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCCee
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ------NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSI-RHRNLTKIISSCSNEDFK 840 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 840 (1057)
++|...+.||+|+||.||+|... ++..||||+++... ....+.+.+|+++++++ +||||+++++++...+..
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 114 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI 114 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence 46888999999999999999642 35689999986543 34456789999999999 799999999999999999
Q ss_pred EEEEEEccCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccc
Q 001544 841 ALILEYMRNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 919 (1057)
Q Consensus 841 ~lV~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 919 (1057)
++||||+.+|+|.+++.... ..+++.++..++.|++.|++||| +.+|+||||||+||+++.++.++++|||+++..
T Consensus 115 ~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~ 191 (302)
T cd05055 115 LVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDFGLARDI 191 (302)
T ss_pred EEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECCCcccccc
Confidence 99999999999999997644 34899999999999999999999 899999999999999999999999999999865
Q ss_pred cCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhh
Q 001544 920 IGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIID 998 (1057)
Q Consensus 920 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1057)
.............++..|+|||.+.+..++.++||||+||++|||++ |..||......+ ...+..+
T Consensus 192 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-------------~~~~~~~ 258 (302)
T cd05055 192 MNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-------------KFYKLIK 258 (302)
T ss_pred cCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-------------HHHHHHH
Confidence 33222112222345678999999988889999999999999999998 899986532111 0111111
Q ss_pred cccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHh
Q 001544 999 ANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKI 1047 (1057)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 1047 (1057)
.... ...+...+.++.+++.+|++.+|++||++.|+++.|++.
T Consensus 259 ~~~~------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 259 EGYR------MAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred cCCc------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 1100 001123456789999999999999999999999999864
No 155
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=5.2e-36 Score=344.39 Aligned_cols=253 Identities=22% Similarity=0.318 Sum_probs=199.4
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
.+|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++.+.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36889999999999999999854 68999999986432 233467889999999999999999999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC-
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED- 923 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~- 923 (1057)
||+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+|..+....
T Consensus 81 E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~ 156 (376)
T cd05598 81 DYIPGGDMMSLLIRLG-IFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (376)
T ss_pred eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccc
Confidence 9999999999987654 4888889999999999999999 9999999999999999999999999999975321000
Q ss_pred ----------------------------------------CccccccccccccccCccccCCCCCCccchHHHHHHHHHH
Q 001544 924 ----------------------------------------QSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLME 963 (1057)
Q Consensus 924 ----------------------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~e 963 (1057)
.........||+.|+|||++.+..++.++||||+||++||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye 236 (376)
T cd05598 157 SKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 236 (376)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeee
Confidence 0000112468999999999999899999999999999999
Q ss_pred HhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCC---CHHHH
Q 001544 964 TFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERI---TAKEI 1040 (1057)
Q Consensus 964 lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp---s~~ev 1040 (1057)
|++|+.||......+.. ..+.... .....+....+++++.+++.+|+ .+|.+|+ ++.|+
T Consensus 237 ll~G~~Pf~~~~~~~~~-------------~~i~~~~----~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~el 298 (376)
T cd05598 237 MLVGQPPFLADTPAETQ-------------LKVINWE----TTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEI 298 (376)
T ss_pred hhhCCCCCCCCCHHHHH-------------HHHhccC----ccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHH
Confidence 99999999753211110 0000000 00001111234667788898876 5999999 89999
Q ss_pred HHH
Q 001544 1041 VRR 1043 (1057)
Q Consensus 1041 l~~ 1043 (1057)
++|
T Consensus 299 l~h 301 (376)
T cd05598 299 KAH 301 (376)
T ss_pred hCC
Confidence 887
No 156
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2.8e-35 Score=318.49 Aligned_cols=247 Identities=27% Similarity=0.441 Sum_probs=199.8
Q ss_pred ceeccccCeEEEEEEecCCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCCChh
Q 001544 775 NLIGRGSFGSVYIARLQNGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNGSLE 853 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~ 853 (1057)
++||+|+||.||+|...+++.||+|.++... ......+.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 4699999999999998889999999986543 334457889999999999999999999999999999999999999999
Q ss_pred HHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccccccc
Q 001544 854 KCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA 933 (1057)
Q Consensus 854 ~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 933 (1057)
+++......+++.++..++.|++.|+.|+| +++++||||||+||++++++.+|++|||++....... ........+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~ 156 (250)
T cd05085 81 SFLRKKKDELKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGI-YSSSGLKQI 156 (250)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccceeccccc-cccCCCCCC
Confidence 998776666899999999999999999999 9999999999999999999999999999987542211 111112234
Q ss_pred cccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHHH
Q 001544 934 TLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAK 1012 (1057)
Q Consensus 934 t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1057)
+..|+|||+..+..++.++||||||+++||+++ |..||....... ....+.... +...+
T Consensus 157 ~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~--------------~~~~~~~~~------~~~~~ 216 (250)
T cd05085 157 PIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ--------------AREQVEKGY------RMSCP 216 (250)
T ss_pred cccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH--------------HHHHHHcCC------CCCCC
Confidence 567999999988889999999999999999998 888986521110 001111000 00111
Q ss_pred HHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHH
Q 001544 1013 EQCASSVFNLAMECTVESPDERITAKEIVRRLL 1045 (1057)
Q Consensus 1013 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1045 (1057)
..++..+.+++.+|++.+|++||++.|+++.|.
T Consensus 217 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 217 QKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 235678899999999999999999999999875
No 157
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-35 Score=310.35 Aligned_cols=265 Identities=27% Similarity=0.437 Sum_probs=203.7
Q ss_pred CCCCCCceeccccCeEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHHHh--cCCCCceeEeeeeccC----CeeEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERAFKSFDTECEVMKS--IRHRNLTKIISSCSNE----DFKAL 842 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~----~~~~l 842 (1057)
.+....+.||+|.||.||+|++. |+.||||+|...++. .+.+|.++++. ++|+||..+++.-..+ .+.++
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srdE~---SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwL 286 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRDER---SWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWL 286 (513)
T ss_pred heeEEEEEecCccccceeecccc-CCceEEEEecccchh---hhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEE
Confidence 35567789999999999999998 899999999766554 44567777765 4999999999875433 36789
Q ss_pred EEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHh-----CCCCCeEEccCCCCCeeeCCCCcEEEEcccccc
Q 001544 843 ILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHF-----GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAK 917 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~-----~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~ 917 (1057)
|++|.+.|||.|++.. ..++....++++..+|.||+|||. +..+.|.|||||+.|||+.+++.+.|+|+|+|.
T Consensus 287 vTdYHe~GSL~DyL~r--~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv 364 (513)
T KOG2052|consen 287 VTDYHEHGSLYDYLNR--NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 364 (513)
T ss_pred eeecccCCcHHHHHhh--ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeE
Confidence 9999999999999987 458999999999999999999993 346789999999999999999999999999998
Q ss_pred cccCCCC--ccccccccccccccCccccCCCC----C--CccchHHHHHHHHHHHhhC----------CCCCCccccccc
Q 001544 918 LLIGEDQ--SMTQTQTLATLGYMAPEYGREGR----V--STKGDVYSFGILLMETFTR----------RKPTDEIFSGEM 979 (1057)
Q Consensus 918 ~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~----~--~~~~Dv~s~G~il~elltg----------~~p~~~~~~~~~ 979 (1057)
.+..... .......+||-+|||||++.+.- + -..+||||||.|+||++-. +.||.+..+.+.
T Consensus 365 ~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DP 444 (513)
T KOG2052|consen 365 RHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDP 444 (513)
T ss_pred EecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCC
Confidence 8754322 33445678999999999886532 1 2368999999999999864 356655444443
Q ss_pred chhhhhhhccchhHHHhhhcccc-cccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHH
Q 001544 980 TLKHWVNDFLPISMMKIIDANLL-ITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRD 1049 (1057)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~ 1049 (1057)
..++. .+++-.... .....++.. .++...+.++|+.||..+|..|.|+--+.+.+.++.+
T Consensus 445 s~eeM---------rkVVCv~~~RP~ipnrW~s-~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 445 SFEEM---------RKVVCVQKLRPNIPNRWKS-DPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CHHHH---------hcceeecccCCCCCccccc-CHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 33322 222211111 112222322 3456789999999999999999999999999988763
No 158
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=3.3e-35 Score=324.38 Aligned_cols=269 Identities=22% Similarity=0.410 Sum_probs=205.6
Q ss_pred CCCCCceeccccCeEEEEEEe-----cCCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccC--CeeE
Q 001544 770 GFSENNLIGRGSFGSVYIARL-----QNGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNE--DFKA 841 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 841 (1057)
-|++.+.||+|+||.||+|.. .++..||+|.++... ......+.+|++++++++|||++++++++.+. ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 467889999999999999974 357899999986543 34457899999999999999999999998764 5688
Q ss_pred EEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccC
Q 001544 842 LILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIG 921 (1057)
Q Consensus 842 lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 921 (1057)
+||||+++++|.+++.+....+++.++..++.|++.||+||| +++|+||||||+||+++.++.++|+|||+++....
T Consensus 85 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 161 (284)
T ss_pred EEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCcccccccc
Confidence 999999999999999776666899999999999999999999 99999999999999999999999999999986643
Q ss_pred CCCc-cccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchh-hhhhhccchhHHHhhhc
Q 001544 922 EDQS-MTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLK-HWVNDFLPISMMKIIDA 999 (1057)
Q Consensus 922 ~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 999 (1057)
.... .......++..|+|||+..+..++.++||||||+++|||++++.|+........... .+..........+....
T Consensus 162 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (284)
T cd05079 162 DKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEE 241 (284)
T ss_pred CccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHc
Confidence 2221 111233456679999998888899999999999999999998876543211100000 00000000000111100
Q ss_pred ccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHh
Q 001544 1000 NLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKI 1047 (1057)
Q Consensus 1000 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 1047 (1057)
..+.+.+..++.++.+++.+|++.+|++||++.++++.++++
T Consensus 242 ------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 242 ------GKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred ------CccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 011112234677899999999999999999999999999876
No 159
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=3.3e-35 Score=319.16 Aligned_cols=249 Identities=26% Similarity=0.380 Sum_probs=204.7
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc--chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ--HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
+|+..+.||+|++|.||+|..+ +++.||+|.+... .......+.+|++++++++|||++++++++.+.+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4777899999999999999865 6899999998643 344567889999999999999999999999999999999999
Q ss_pred ccCCChhHHHhcC-CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 847 MRNGSLEKCLYSG-NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 847 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
+++++|.+++... ...+++.++..++.|++.|++||| +.+++||||||+||+++.++.++++|||+++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~-- 155 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT-- 155 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc--
Confidence 9999999999775 456899999999999999999999 8999999999999999999999999999988653221
Q ss_pred cccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccccccc
Q 001544 926 MTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITE 1005 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1057)
.......++..|+|||+..+..++.++|+||||+++|||++|+.||......+ . ........
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~-----------~~~~~~~~----- 217 (256)
T cd08529 156 NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA--L-----------ILKIIRGV----- 217 (256)
T ss_pred chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH--H-----------HHHHHcCC-----
Confidence 12233457889999999998889999999999999999999999986532110 0 00111000
Q ss_pred chhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1006 DKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.......++.++.+++.+||+.+|++||++.|++++
T Consensus 218 --~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 218 --FPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred --CCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 001112456778999999999999999999999875
No 160
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.6e-35 Score=326.77 Aligned_cols=250 Identities=26% Similarity=0.353 Sum_probs=204.7
Q ss_pred CCCCCCceeccccCeEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 769 NGFSENNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
.+|+..+.||+|+||.||+|.. .+++.||+|.+..........+.+|++++++++|||++++++++..++..++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 4788889999999999999985 468999999997665555678889999999999999999999999999999999999
Q ss_pred cCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccc
Q 001544 848 RNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT 927 (1057)
Q Consensus 848 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 927 (1057)
++++|.+++... .+++.++..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||.+....... ..
T Consensus 100 ~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~--~~ 172 (296)
T cd06654 100 AGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SK 172 (296)
T ss_pred CCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECccccchhccccc--cc
Confidence 999999998654 4789999999999999999999 9999999999999999999999999999987653221 12
Q ss_pred cccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccch
Q 001544 928 QTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDK 1007 (1057)
Q Consensus 928 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1057)
.....+++.|+|||...+..++.++|||||||++|||++|+.||......+. ...+. ... ..
T Consensus 173 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~-~~~~~-----------~~~------~~ 234 (296)
T cd06654 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIA-----------TNG------TP 234 (296)
T ss_pred cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh-HHHHh-----------cCC------CC
Confidence 2334678899999999888889999999999999999999999865221110 00000 000 00
Q ss_pred hhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1008 HFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
....+...+..+.+++.+||..+|++||++.|++++
T Consensus 235 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 235 ELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred CCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 011123456678899999999999999999999985
No 161
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-35 Score=310.68 Aligned_cols=252 Identities=26% Similarity=0.373 Sum_probs=205.6
Q ss_pred CCCCCceeccccCeEEEEEEecC-CcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQN-GIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
.|+..+.||+|.-|+||+++..+ +..+|+|++.+.. .....+.+.|.+||+.+.||.++.+|+.|+.++..|+|||
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me 157 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME 157 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence 45667899999999999999764 5899999996543 3456778899999999999999999999999999999999
Q ss_pred EccCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCC--
Q 001544 846 YMRNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE-- 922 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-- 922 (1057)
||+||+|....+++. +.+++..++-++.+|+-||+||| -.|||+|||||+|||+.++|++.++||.++......
T Consensus 158 yCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt 234 (459)
T KOG0610|consen 158 YCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPT 234 (459)
T ss_pred cCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeeccccccCCCCCe
Confidence 999999999887655 67999999999999999999999 999999999999999999999999999987543110
Q ss_pred -----C------------------------C-c----------------------cccccccccccccCccccCCCCCCc
Q 001544 923 -----D------------------------Q-S----------------------MTQTQTLATLGYMAPEYGREGRVST 950 (1057)
Q Consensus 923 -----~------------------------~-~----------------------~~~~~~~~t~~y~aPE~~~~~~~~~ 950 (1057)
. . . ......+||-.|.|||++.+..++.
T Consensus 235 ~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgs 314 (459)
T KOG0610|consen 235 LVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGS 314 (459)
T ss_pred eeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCc
Confidence 0 0 0 0001125777899999999999999
Q ss_pred cchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCC
Q 001544 951 KGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVES 1030 (1057)
Q Consensus 951 ~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 1030 (1057)
++|.|+|||++|||+.|..||.+.... .++.. ++- ....++..+..+..++|||++.+.+|
T Consensus 315 AVDWWtfGIflYEmLyG~TPFKG~~~~-~Tl~N------------Iv~------~~l~Fp~~~~vs~~akDLIr~LLvKd 375 (459)
T KOG0610|consen 315 AVDWWTFGIFLYEMLYGTTPFKGSNNK-ETLRN------------IVG------QPLKFPEEPEVSSAAKDLIRKLLVKD 375 (459)
T ss_pred hhhHHHHHHHHHHHHhCCCCcCCCCch-hhHHH------------Hhc------CCCcCCCCCcchhHHHHHHHHHhccC
Confidence 999999999999999999999763222 22221 111 11123333466788999999999999
Q ss_pred CCCCCC----HHHHHHH
Q 001544 1031 PDERIT----AKEIVRR 1043 (1057)
Q Consensus 1031 P~~Rps----~~evl~~ 1043 (1057)
|.+|.. |.||.+|
T Consensus 376 P~kRlg~~rGA~eIK~H 392 (459)
T KOG0610|consen 376 PSKRLGSKRGAAEIKRH 392 (459)
T ss_pred hhhhhccccchHHhhcC
Confidence 999997 8888776
No 162
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=6.3e-35 Score=318.18 Aligned_cols=254 Identities=25% Similarity=0.376 Sum_probs=207.1
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
++|+..+.||+|+||.||+|... +++.+|+|++........+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 57888999999999999999864 57899999997665556788999999999999999999999999999999999999
Q ss_pred cCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccc
Q 001544 848 RNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT 927 (1057)
Q Consensus 848 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 927 (1057)
++++|.+++......+++.++..++.|++.|++||| +.+++||||+|+||++++++.+||+|||.+....... ..
T Consensus 83 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--~~ 157 (262)
T cd06613 83 GGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI--AK 157 (262)
T ss_pred CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccchhhhhhh--hc
Confidence 999999998876567999999999999999999999 8999999999999999999999999999987653211 12
Q ss_pred cccccccccccCccccCCC---CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccc
Q 001544 928 QTQTLATLGYMAPEYGREG---RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLIT 1004 (1057)
Q Consensus 928 ~~~~~~t~~y~aPE~~~~~---~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1057)
.....++..|+|||..... .++.++||||+|+++|||++|+.||......+... .. .....
T Consensus 158 ~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~-------------~~-~~~~~-- 221 (262)
T cd06613 158 RKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALF-------------LI-SKSNF-- 221 (262)
T ss_pred cccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHH-------------HH-HhccC--
Confidence 2334678889999998776 78999999999999999999999986532111100 00 00000
Q ss_pred cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1005 EDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
...........+.++.+++.+||..+|.+||++.+++.+
T Consensus 222 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 222 PPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred CCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000111123456778999999999999999999999864
No 163
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=3.8e-35 Score=321.05 Aligned_cols=255 Identities=26% Similarity=0.405 Sum_probs=203.3
Q ss_pred HHhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 766 QATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 766 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
.+++.+.....||+|+||.||+|... +++.||+|.+........+.+.+|++++++++|+||+++++++..++..++|+
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 84 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFM 84 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEE
Confidence 45556666789999999999999854 67899999987666666788999999999999999999999999999999999
Q ss_pred EEccCCChhHHHhcCCccC--CHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC-CCcEEEEcccccccccC
Q 001544 845 EYMRNGSLEKCLYSGNYIL--DIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD-NMVAHLSDFGIAKLLIG 921 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l--~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~Dfg~a~~~~~ 921 (1057)
||+++++|.+++......+ ++..+..++.|+++|++||| +.+|+||||||+||+++. ++.++|+|||.+.....
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~ 161 (268)
T cd06624 85 EQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAG 161 (268)
T ss_pred ecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEecchhheeccc
Confidence 9999999999998654445 88889999999999999999 999999999999999986 67999999999876532
Q ss_pred CCCccccccccccccccCccccCCCC--CCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhc
Q 001544 922 EDQSMTQTQTLATLGYMAPEYGREGR--VSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDA 999 (1057)
Q Consensus 922 ~~~~~~~~~~~~t~~y~aPE~~~~~~--~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1057)
.. .......++..|+|||+..... ++.++||||+|+++|||++|+.||........ ..|..
T Consensus 162 ~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~--~~~~~------------- 224 (268)
T cd06624 162 IN--PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA--AMFKV------------- 224 (268)
T ss_pred CC--CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh--hHhhh-------------
Confidence 21 1222335788999999876543 78899999999999999999999865211110 00000
Q ss_pred ccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1000 NLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1000 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
... ......+..+++++.+++.+||+.+|++||++.|+++|
T Consensus 225 ~~~---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 225 GMF---KIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred hhh---ccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 000 00011123456778999999999999999999999875
No 164
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.4e-35 Score=326.02 Aligned_cols=258 Identities=24% Similarity=0.386 Sum_probs=203.5
Q ss_pred HhCCCCCCceeccccCeEEEEEEec------CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCe
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARLQ------NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDF 839 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 839 (1057)
..++|++.++||+|+||.||+|... .+..||+|.++... ......+.+|+.++++++||||+++++++.+.+.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 3567899999999999999999643 24589999886443 2334567889999999999999999999999999
Q ss_pred eEEEEEEccCCChhHHHhcCC---------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEE
Q 001544 840 KALILEYMRNGSLEKCLYSGN---------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHL 910 (1057)
Q Consensus 840 ~~lV~E~~~~gsL~~~l~~~~---------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 910 (1057)
.++||||+++|+|.+++.... ...++..+..++.|++.|++||| +++|+||||||+||++++++.+++
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCCChheEEEcCCCcEEE
Confidence 999999999999999986522 34567788999999999999999 999999999999999999999999
Q ss_pred EcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhcc
Q 001544 911 SDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFL 989 (1057)
Q Consensus 911 ~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 989 (1057)
+|||+++...............++..|+|||...++.++.++|||||||++|||++ |..||...... .+..
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~-----~~~~--- 232 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE-----QVLK--- 232 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHH---
Confidence 99999986533222222222345678999999988889999999999999999999 67787542111 1110
Q ss_pred chhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHh
Q 001544 990 PISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKI 1047 (1057)
Q Consensus 990 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 1047 (1057)
...+... ...++.++..+.+++.+|++.+|++||++.|+++.+++.
T Consensus 233 -----~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 233 -----FVMDGGY-------LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred -----HHHcCCC-------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 0111100 011123467899999999999999999999999988875
No 165
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7e-36 Score=322.06 Aligned_cols=254 Identities=20% Similarity=0.312 Sum_probs=207.1
Q ss_pred hCCCCCCceeccccCeEEEEEEecCCcEEEEEEee--ccchhHHHHHHHHHHHHHhcC-CCCceeEeeeeccCCeeEEEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQNGIEVAVKTFD--LQHERAFKSFDTECEVMKSIR-HRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~ 844 (1057)
...|++.+.||+||.++||++...+.+.||+|++. ..+......|..|+..|.+++ |.+||++++|-..++..|+||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 34688899999999999999998888889988763 335566788999999999995 999999999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
||-+ .+|.+++.++....+...++.+..|++.|+.++| .+||||.||||.|+++- +|.+||+|||.|..+.....
T Consensus 440 E~Gd-~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTT 514 (677)
T KOG0596|consen 440 ECGD-IDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTT 514 (677)
T ss_pred eccc-ccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHH---HhceeecCCCcccEEEE-eeeEEeeeechhcccCcccc
Confidence 9864 4999999887765664588999999999999999 99999999999999985 47999999999999877777
Q ss_pred ccccccccccccccCccccCCC-----------CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhH
Q 001544 925 SMTQTQTLATLGYMAPEYGREG-----------RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISM 993 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~~-----------~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 993 (1057)
.......+||+.||+||.+... +.+.++||||+||++|+|+.|+.||+..... | ..+
T Consensus 515 sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~------~------aKl 582 (677)
T KOG0596|consen 515 SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQ------I------AKL 582 (677)
T ss_pred ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHH------H------HHH
Confidence 7777788999999999976432 2567999999999999999999999763211 1 113
Q ss_pred HHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 994 MKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 994 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
..+.++.-..+...... ..++.++|+.|+..||++||+..|+++|
T Consensus 583 ~aI~~P~~~Iefp~~~~-----~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 583 HAITDPNHEIEFPDIPE-----NDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred HhhcCCCccccccCCCC-----chHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 33444322211111111 1238899999999999999999999986
No 166
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=3.1e-35 Score=322.99 Aligned_cols=245 Identities=23% Similarity=0.358 Sum_probs=193.4
Q ss_pred eccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCCCh
Q 001544 777 IGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNGSL 852 (1057)
Q Consensus 777 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL 852 (1057)
||+|+||.||+++.+ +|+.||+|++.... ......+..|++++++++||||+++++++.++...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999865 68999999985432 12234556799999999999999999999999999999999999999
Q ss_pred hHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccccc
Q 001544 853 EKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQT 931 (1057)
Q Consensus 853 ~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 931 (1057)
.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||++...... ......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~---~~~~~~ 154 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG---KTITQR 154 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC---ceeecc
Confidence 98876543 45899999999999999999999 999999999999999999999999999998765321 122334
Q ss_pred cccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHH
Q 001544 932 LATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAA 1011 (1057)
Q Consensus 932 ~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1057)
.++..|+|||++.+..++.++||||+||++|||++|+.||...... ....... ........ .. .
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~-~~~~~~~--------~~~~~~~~------~~-~ 218 (277)
T cd05607 155 AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK-VAKEELK--------RRTLEDEV------KF-E 218 (277)
T ss_pred CCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch-hhHHHHH--------HHhhcccc------cc-c
Confidence 6889999999998888999999999999999999999998652211 1100100 00010000 00 0
Q ss_pred HHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1012 KEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1012 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
...++.++.+++.+||+.||++||+++|+++.
T Consensus 219 ~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 219 HQNFTEESKDICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred cccCCHHHHHHHHHHhccCHhhCCCCccchhh
Confidence 12356778999999999999999999776543
No 167
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=2.7e-35 Score=320.68 Aligned_cols=253 Identities=25% Similarity=0.457 Sum_probs=204.1
Q ss_pred hCCCCCCceeccccCeEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
.++|++.++||+|+||.||+|..++++.||+|.+..... ...++.+|++++++++||||+++++++. .+..++||||+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYM 82 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcC
Confidence 356888999999999999999988899999999865433 3467889999999999999999999874 45689999999
Q ss_pred cCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 848 RNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 848 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
++++|.+++.... ..+++.++..++.|++.||+||| +.+++||||||+||++++++.++++|||.+....... ..
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-~~ 158 (260)
T cd05067 83 ENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNE-YT 158 (260)
T ss_pred CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCC-cc
Confidence 9999999886533 46899999999999999999999 9999999999999999999999999999997653211 11
Q ss_pred ccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhccccccc
Q 001544 927 TQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITE 1005 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1057)
......++..|+|||+.....++.++||||||+++||+++ |+.||......+ ..+......
T Consensus 159 ~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--------------~~~~~~~~~---- 220 (260)
T cd05067 159 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE--------------VIQNLERGY---- 220 (260)
T ss_pred cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH--------------HHHHHHcCC----
Confidence 2223345678999999988889999999999999999999 999986522111 011111100
Q ss_pred chhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHH
Q 001544 1006 DKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLK 1046 (1057)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1046 (1057)
..+.+..++.++.+++.+|++.+|++||+++++.+.|+.
T Consensus 221 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 221 --RMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred --CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 011112345679999999999999999999999999875
No 168
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=3.6e-35 Score=323.76 Aligned_cols=251 Identities=25% Similarity=0.375 Sum_probs=202.8
Q ss_pred CCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccC
Q 001544 771 FSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRN 849 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 849 (1057)
|++.+.||+|+||.||+|... ++..+|+|.+........+.+.+|+++++.++|||++++++++..++..++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 566788999999999999865 5788999998766666677889999999999999999999999999999999999999
Q ss_pred CChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccc
Q 001544 850 GSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQT 929 (1057)
Q Consensus 850 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 929 (1057)
++|.+++......+++..+..++.|+++||+||| +.+++||||||+||+++.++.+|++|||++...... .....
T Consensus 87 ~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~--~~~~~ 161 (282)
T cd06643 87 GAVDAVMLELERPLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT--IQRRD 161 (282)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEcccccccccccc--ccccc
Confidence 9999988766667999999999999999999999 999999999999999999999999999998764221 12223
Q ss_pred cccccccccCccccC-----CCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccc
Q 001544 930 QTLATLGYMAPEYGR-----EGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLIT 1004 (1057)
Q Consensus 930 ~~~~t~~y~aPE~~~-----~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1057)
...++..|+|||++. +..++.++||||+||++|||++|+.||......+. . ........
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-~------------~~~~~~~~--- 225 (282)
T cd06643 162 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV-L------------LKIAKSEP--- 225 (282)
T ss_pred cccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH-H------------HHHhhcCC---
Confidence 346888999999873 44578899999999999999999999865221110 0 00000000
Q ss_pred cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 1005 EDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
.....+..++.++.+++.+||+.+|++||++.+++++-
T Consensus 226 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 263 (282)
T cd06643 226 --PTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHP 263 (282)
T ss_pred --CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCC
Confidence 00111223566789999999999999999999998763
No 169
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=4.1e-35 Score=318.45 Aligned_cols=250 Identities=32% Similarity=0.517 Sum_probs=206.1
Q ss_pred hCCCCCCceeccccCeEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
.++|++.+.||+|+||.||+|... |+.||||.++.... ..+++.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 346888899999999999999876 78999999976544 4678899999999999999999999999899999999999
Q ss_pred cCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 848 RNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 848 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
++++|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+||+++.++.+||+|||.++......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~--- 156 (256)
T cd05039 83 AKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ--- 156 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEccccccccccccc---
Confidence 9999999987654 36899999999999999999999 9999999999999999999999999999998652111
Q ss_pred ccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhccccccc
Q 001544 927 TQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITE 1005 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1057)
.....+..|+|||....+.++.++||||+|+++||+++ |+.||......+ ....+....
T Consensus 157 --~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--------------~~~~~~~~~---- 216 (256)
T cd05039 157 --DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--------------VVPHVEKGY---- 216 (256)
T ss_pred --ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH--------------HHHHHhcCC----
Confidence 12234567999999988889999999999999999997 999986421110 111111100
Q ss_pred chhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHh
Q 001544 1006 DKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKI 1047 (1057)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 1047 (1057)
....+..+++++.+++.+|+..+|++||++.|++++|+.+
T Consensus 217 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 217 --RMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred --CCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 1111234567899999999999999999999999999764
No 170
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2.9e-35 Score=337.50 Aligned_cols=267 Identities=24% Similarity=0.291 Sum_probs=199.3
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc--chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCC-----eeE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ--HERAFKSFDTECEVMKSIRHRNLTKIISSCSNED-----FKA 841 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 841 (1057)
+|+..+.||+|+||+||+|... +|+.||||++... .....+++.+|+++++.++||||+++++++...+ ..|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4778899999999999999864 7899999998543 2334567889999999999999999999998766 789
Q ss_pred EEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccC
Q 001544 842 LILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIG 921 (1057)
Q Consensus 842 lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 921 (1057)
+|+||+. ++|.+.+.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 lv~e~~~-~~l~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~ 155 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQ-PLSSDHVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEP 155 (372)
T ss_pred EEeeccc-cCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEeccccceeeccc
Confidence 9999997 57888776543 5899999999999999999999 99999999999999999999999999999986532
Q ss_pred CCCccccccccccccccCccccCCC-CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccc---hhH----
Q 001544 922 EDQSMTQTQTLATLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLP---ISM---- 993 (1057)
Q Consensus 922 ~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~---~~~---- 993 (1057)
. .........++..|+|||.+.+. .++.++||||+||++|||++|+.||......+ .+......... ...
T Consensus 156 ~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~g~~~~~~~~~~~ 233 (372)
T cd07853 156 D-ESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ-QLDLITDLLGTPSLEAMRSAC 233 (372)
T ss_pred C-ccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHcCCCCHHHHHHhh
Confidence 2 12223344678899999988764 47899999999999999999999997532111 01110000000 000
Q ss_pred ---HHhhhcccccccc--hhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 994 ---MKIIDANLLITED--KHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 994 ---~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
...+......... .........++++.+++.+|++.||++|||+.|+++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 234 EGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 0000000000000 0000112346778999999999999999999999986
No 171
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.5e-35 Score=331.28 Aligned_cols=242 Identities=23% Similarity=0.352 Sum_probs=192.7
Q ss_pred ceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCCeeEEEEEEccC
Q 001544 775 NLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSI-RHRNLTKIISSCSNEDFKALILEYMRN 849 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~~~~ 849 (1057)
+.||+|+||+||+|... +++.||||+++... ......+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999865 57899999997542 23345566788888764 899999999999999999999999999
Q ss_pred CChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccc
Q 001544 850 GSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQT 929 (1057)
Q Consensus 850 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 929 (1057)
|+|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++..... .....
T Consensus 81 g~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~ 154 (316)
T cd05619 81 GDLMFHIQSCH-KFDLPRATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG--DAKTC 154 (316)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCC--CCcee
Confidence 99999887643 5889999999999999999999 999999999999999999999999999998753211 11223
Q ss_pred cccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhh
Q 001544 930 QTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHF 1009 (1057)
Q Consensus 930 ~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1057)
...||..|+|||++.+..++.++||||+||++|||++|+.||...... . ....+.....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-----~---------~~~~i~~~~~------- 213 (316)
T cd05619 155 TFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE-----E---------LFQSIRMDNP------- 213 (316)
T ss_pred eecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH-----H---------HHHHHHhCCC-------
Confidence 446899999999999889999999999999999999999998652111 0 0111110000
Q ss_pred HHHHHHHHHHHHHHhHcccCCCCCCCCHH-HHHHH
Q 001544 1010 AAKEQCASSVFNLAMECTVESPDERITAK-EIVRR 1043 (1057)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~-evl~~ 1043 (1057)
..+..++.++.+++.+|++.||++||++. ++.+|
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05619 214 CYPRWLTREAKDILVKLFVREPERRLGVKGDIRQH 248 (316)
T ss_pred CCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcC
Confidence 01123456788999999999999999997 66553
No 172
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=3.6e-35 Score=319.99 Aligned_cols=248 Identities=32% Similarity=0.545 Sum_probs=205.0
Q ss_pred ceeccccCeEEEEEEecC----CcEEEEEEeeccchh-HHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccC
Q 001544 775 NLIGRGSFGSVYIARLQN----GIEVAVKTFDLQHER-AFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRN 849 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 849 (1057)
+.||+|+||.||+|.... +..||+|++...... ..+.+.+|++.+++++|+|++++++++...+..++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999998653 789999999765433 367899999999999999999999999999999999999999
Q ss_pred CChhHHHhcC--------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccC
Q 001544 850 GSLEKCLYSG--------NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIG 921 (1057)
Q Consensus 850 gsL~~~l~~~--------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 921 (1057)
++|.+++... ...+++.++..++.|+++|++||| +++++||||||+||++++++.+|++|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999999876 467999999999999999999999 99999999999999999999999999999987644
Q ss_pred CCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcc
Q 001544 922 EDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDAN 1000 (1057)
Q Consensus 922 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1057)
...........++..|+|||......++.++||||+|+++|||++ |..||...... .. .....+
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~--------~~~~~~-- 222 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE-----EV--------LEYLRK-- 222 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH-----HH--------HHHHHc--
Confidence 332233344557889999999988889999999999999999999 58888763111 00 001111
Q ss_pred cccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHH
Q 001544 1001 LLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLL 1045 (1057)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1045 (1057)
......+..++.++.+++.+|+..+|++||++.|++++|+
T Consensus 223 -----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 223 -----GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred -----CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 0111222345778999999999999999999999999874
No 173
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.4e-35 Score=332.39 Aligned_cols=242 Identities=24% Similarity=0.324 Sum_probs=195.8
Q ss_pred ceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCCeeEEEEEEccC
Q 001544 775 NLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSI-RHRNLTKIISSCSNEDFKALILEYMRN 849 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~~~~ 849 (1057)
+.||+|+||+||+|... +++.||||+++... ......+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999865 58899999997542 23456677888999888 699999999999999999999999999
Q ss_pred CChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccc
Q 001544 850 GSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQT 929 (1057)
Q Consensus 850 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 929 (1057)
|+|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++..... .....
T Consensus 81 ~~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~~ 154 (318)
T cd05570 81 GDLMFHIQRSG-RFDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG--GVTTS 154 (318)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcC--CCccc
Confidence 99999887654 5899999999999999999999 999999999999999999999999999998753211 11223
Q ss_pred cccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhh
Q 001544 930 QTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHF 1009 (1057)
Q Consensus 930 ~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1057)
...|++.|+|||++.+..++.++||||+||++|||++|+.||...... ... ..+.... .
T Consensus 155 ~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~-----~~~--------~~i~~~~--------~ 213 (318)
T cd05570 155 TFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED-----ELF--------QSILEDE--------V 213 (318)
T ss_pred ceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH-----HHH--------HHHHcCC--------C
Confidence 346889999999999999999999999999999999999998652111 000 0011000 0
Q ss_pred HHHHHHHHHHHHHHhHcccCCCCCCCCH-----HHHHHH
Q 001544 1010 AAKEQCASSVFNLAMECTVESPDERITA-----KEIVRR 1043 (1057)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~evl~~ 1043 (1057)
..+..++.++.+++.+||+.||++||++ .+++++
T Consensus 214 ~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 214 RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 1112356778999999999999999999 888765
No 174
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.8e-35 Score=327.81 Aligned_cols=257 Identities=26% Similarity=0.448 Sum_probs=202.3
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCc--EEEEEEeecc-chhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCCeeEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGI--EVAVKTFDLQ-HERAFKSFDTECEVMKSI-RHRNLTKIISSCSNEDFKAL 842 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 842 (1057)
.++|++.+.||+|+||.||+|..+ ++. .+|+|.++.. .......+.+|++++.++ +||||+++++++.+++..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 356888899999999999999864 454 4677777543 234456788999999999 89999999999999999999
Q ss_pred EEEEccCCChhHHHhcCC---------------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc
Q 001544 843 ILEYMRNGSLEKCLYSGN---------------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMV 907 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 907 (1057)
||||+++|+|.++++... ..+++.+++.++.|++.|++||| +++|+||||||+||++++++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEecCCCc
Confidence 999999999999987542 25789999999999999999999 999999999999999999999
Q ss_pred EEEEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhh
Q 001544 908 AHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVN 986 (1057)
Q Consensus 908 ~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~ 986 (1057)
+||+|||++.... .........++..|+|||+..+..++.++|||||||++|||+| |..||...... .
T Consensus 163 ~kl~dfg~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~--- 231 (303)
T cd05088 163 AKIADFGLSRGQE---VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----E--- 231 (303)
T ss_pred EEeCccccCcccc---hhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH-----H---
Confidence 9999999986321 1111112234567999999888889999999999999999998 99998542111 0
Q ss_pred hccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHHH
Q 001544 987 DFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRDF 1050 (1057)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 1050 (1057)
..+...... ....+..++.++.+++.+||+.+|++||++.+++++++++...
T Consensus 232 ------~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 232 ------LYEKLPQGY------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred ------HHHHHhcCC------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 001010000 0011123456789999999999999999999999999887543
No 175
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=4e-35 Score=321.26 Aligned_cols=257 Identities=25% Similarity=0.397 Sum_probs=206.7
Q ss_pred CCCCCCceeccccCeEEEEEEecC----CcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQN----GIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALI 843 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 843 (1057)
++|+..+.||+|+||.||+|...+ ...||||...... ....+.+.+|++++++++||||+++++++.+ +..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 457788999999999999997543 3579999886554 4456789999999999999999999999875 456899
Q ss_pred EEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC
Q 001544 844 LEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 923 (1057)
|||+++|+|.+++......+++.++..++.|++.|++||| +.+++||||||+||+++.++.+|++|||+++......
T Consensus 85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 161 (270)
T cd05056 85 MELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDES 161 (270)
T ss_pred EEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCceeeeccccc
Confidence 9999999999999876666899999999999999999999 8999999999999999999999999999998653322
Q ss_pred CccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccc
Q 001544 924 QSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLL 1002 (1057)
Q Consensus 924 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1057)
. .......++..|+|||.+....++.++||||||+++||+++ |..||......+. ..+ . ..
T Consensus 162 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~--~~~-----------~-~~--- 223 (270)
T cd05056 162 Y-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV--IGR-----------I-EN--- 223 (270)
T ss_pred c-eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH--HHH-----------H-Hc---
Confidence 1 12222334567999999888889999999999999999986 9999865322111 000 0 00
Q ss_pred cccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHHH
Q 001544 1003 ITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRDF 1050 (1057)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 1050 (1057)
..+...+..++..+.+++.+|+..+|++|||+.|+++.|+++++.
T Consensus 224 ---~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 224 ---GERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred ---CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 001111234567899999999999999999999999999998754
No 176
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=4e-35 Score=320.75 Aligned_cols=258 Identities=24% Similarity=0.355 Sum_probs=207.5
Q ss_pred CCCCCCceeccccCeEEEEEEe-cCCcEEEEEEeecc---chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQ---HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
++|++.+.||+|+||.||+|.. .+++.||||.+... ......++.+|++++++++||||+++++++.+++..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 3677889999999999999985 47899999988543 2334568889999999999999999999999999999999
Q ss_pred EEccCCChhHHHhc---CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccC
Q 001544 845 EYMRNGSLEKCLYS---GNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIG 921 (1057)
Q Consensus 845 E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 921 (1057)
||+++++|.+++.. ....+++.++..++.|++.|++||| +.+++|+||||+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 99999999998864 2345899999999999999999999 99999999999999999999999999999876532
Q ss_pred CCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccc
Q 001544 922 EDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANL 1001 (1057)
Q Consensus 922 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1057)
.. .......++..|+|||...+..++.++|+||||+++|||++|..||...... ...+. +.+....
T Consensus 159 ~~--~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~---------~~~~~~~ 224 (267)
T cd08229 159 KT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLC---------KKIEQCD 224 (267)
T ss_pred CC--cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch---HHHHh---------hhhhcCC
Confidence 22 1122345788999999998888999999999999999999999998542111 11110 0110000
Q ss_pred ccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhH
Q 001544 1002 LITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIR 1048 (1057)
Q Consensus 1002 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~ 1048 (1057)
. .......++.++.+++.+||+.+|++|||+.+|++.++++.
T Consensus 225 ~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 225 Y-----PPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred C-----CCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 0 00011235678999999999999999999999999998864
No 177
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.8e-35 Score=337.55 Aligned_cols=258 Identities=22% Similarity=0.294 Sum_probs=202.5
Q ss_pred HHHHhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCe
Q 001544 764 LFQATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDF 839 (1057)
Q Consensus 764 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 839 (1057)
.....++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+++.
T Consensus 38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (371)
T cd05622 38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY 117 (371)
T ss_pred cCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 3445678999999999999999999865 68899999986422 2334567889999999999999999999999999
Q ss_pred eEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccc
Q 001544 840 KALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 919 (1057)
Q Consensus 840 ~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 919 (1057)
.++||||+++|+|.+++.... +++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 118 ~~lv~Ey~~gg~L~~~~~~~~--~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~ 192 (371)
T cd05622 118 LYMVMEYMPGGDLVNLMSNYD--VPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (371)
T ss_pred EEEEEcCCCCCcHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEECCCCCEEEEeCCceeEc
Confidence 999999999999999987543 788889999999999999999 999999999999999999999999999999865
Q ss_pred cCCCCccccccccccccccCccccCCC----CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHH
Q 001544 920 IGEDQSMTQTQTLATLGYMAPEYGREG----RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMK 995 (1057)
Q Consensus 920 ~~~~~~~~~~~~~~t~~y~aPE~~~~~----~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1057)
.... ........||+.|+|||++... .++.++||||+||++|||++|+.||...... .. ...
T Consensus 193 ~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~----~~---------~~~ 258 (371)
T cd05622 193 NKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV----GT---------YSK 258 (371)
T ss_pred CcCC-cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH----HH---------HHH
Confidence 3221 1122345689999999987653 3788999999999999999999998652110 00 011
Q ss_pred hhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCC--CCCHHHHHHHH
Q 001544 996 IIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDE--RITAKEIVRRL 1044 (1057)
Q Consensus 996 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~~L 1044 (1057)
+.... ....++....++..+.+++.+|+...|.+ ||++.|+++|.
T Consensus 259 i~~~~----~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 259 IMNHK----NSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred HHcCC----CcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 11100 00111222346777899999999844433 78999999875
No 178
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.2e-35 Score=332.41 Aligned_cols=242 Identities=22% Similarity=0.321 Sum_probs=192.5
Q ss_pred ceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCCeeEEEEEEccC
Q 001544 775 NLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSI-RHRNLTKIISSCSNEDFKALILEYMRN 849 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~~~~ 849 (1057)
++||+|+||.||+|+.. +|+.||||+++... ......+..|.+++... +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999865 68999999996542 22345567788888765 899999999999999999999999999
Q ss_pred CChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccc
Q 001544 850 GSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQT 929 (1057)
Q Consensus 850 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 929 (1057)
|+|.+++.... .+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..... .....
T Consensus 81 g~L~~~i~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~ 154 (316)
T cd05620 81 GDLMFHIQDKG-RFDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG--DNRAS 154 (316)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccC--CCcee
Confidence 99999887653 4889999999999999999999 999999999999999999999999999998743211 12233
Q ss_pred cccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhh
Q 001544 930 QTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHF 1009 (1057)
Q Consensus 930 ~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1057)
...||+.|+|||++.+..++.++||||+||++|||++|+.||...... . ..+.+.... .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~-----~---------~~~~~~~~~-------~ 213 (316)
T cd05620 155 TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED-----E---------LFESIRVDT-------P 213 (316)
T ss_pred ccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-----H---------HHHHHHhCC-------C
Confidence 456899999999999999999999999999999999999998652110 0 011110000 0
Q ss_pred HHHHHHHHHHHHHHhHcccCCCCCCCCHH-HHHHH
Q 001544 1010 AAKEQCASSVFNLAMECTVESPDERITAK-EIVRR 1043 (1057)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~-evl~~ 1043 (1057)
..+..++.++.+++.+|++.||++||++. ++.+|
T Consensus 214 ~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h 248 (316)
T cd05620 214 HYPRWITKESKDILEKLFERDPTRRLGVVGNIRGH 248 (316)
T ss_pred CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence 01112456788999999999999999985 56543
No 179
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=4.9e-35 Score=317.87 Aligned_cols=250 Identities=26% Similarity=0.395 Sum_probs=207.2
Q ss_pred CCCCCCceeccccCeEEEEEEecC-CcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQN-GIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
++|+..+.||+|+||.||+|...+ ++.||+|.++.... .+++.+|++++++++||||+++++++.+++..++|+||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 578889999999999999998764 88999999865433 678999999999999999999999999999999999999
Q ss_pred cCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccc
Q 001544 848 RNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT 927 (1057)
Q Consensus 848 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 927 (1057)
++++|.+++......+++..+..++.|+++|++||| +.+++||||+|+||+++.++.++|+|||++....... ..
T Consensus 81 ~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~--~~ 155 (256)
T cd06612 81 GAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM--AK 155 (256)
T ss_pred CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccchhcccCc--cc
Confidence 999999999876777999999999999999999999 8999999999999999999999999999998653221 12
Q ss_pred cccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccch
Q 001544 928 QTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDK 1007 (1057)
Q Consensus 928 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1057)
.....++..|+|||+..+..++.++||||||+++|||++|+.||......+... .... ....
T Consensus 156 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~--------------~~~~----~~~~ 217 (256)
T cd06612 156 RNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF--------------MIPN----KPPP 217 (256)
T ss_pred cccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh--------------hhcc----CCCC
Confidence 233457889999999988889999999999999999999999987532211100 0000 0001
Q ss_pred hhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1008 HFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.......++.++.+++.+||+.+|++||++.|++++
T Consensus 218 ~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 218 TLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred CCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 111223456778999999999999999999999874
No 180
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=3.9e-35 Score=318.70 Aligned_cols=247 Identities=25% Similarity=0.403 Sum_probs=197.3
Q ss_pred eeccccCeEEEEEEec---CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCC
Q 001544 776 LIGRGSFGSVYIARLQ---NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNG 850 (1057)
Q Consensus 776 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~g 850 (1057)
.||+|+||+||+|.++ ++..||+|+++... ....+.+.+|+.++++++||||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 5899999999999643 57899999986443 334578899999999999999999999885 45678999999999
Q ss_pred ChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc-ccc
Q 001544 851 SLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM-TQT 929 (1057)
Q Consensus 851 sL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-~~~ 929 (1057)
+|.+++.... .+++..+..++.|++.|++||| +++|+||||||.||++++++.+||+|||.++.+....... ...
T Consensus 81 ~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05116 81 PLNKFLQKNK-HVTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKT 156 (257)
T ss_pred cHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecC
Confidence 9999987544 5899999999999999999999 9999999999999999999999999999998653322211 112
Q ss_pred cccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchh
Q 001544 930 QTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKH 1008 (1057)
Q Consensus 930 ~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1057)
...++..|+|||......++.++|+|||||++|||++ |+.||...... . ..+.++... .
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~---------~~~~i~~~~------~ 216 (257)
T cd05116 157 HGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN-----E---------VTQMIESGE------R 216 (257)
T ss_pred CCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-----H---------HHHHHHCCC------C
Confidence 2234578999999888889999999999999999998 99998652111 1 111111111 1
Q ss_pred hHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHh
Q 001544 1009 FAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKI 1047 (1057)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 1047 (1057)
.+.+..+++++.+++.+||+.||++||++.+|.+.|++.
T Consensus 217 ~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 217 MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 111234677899999999999999999999999999864
No 181
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=4.6e-35 Score=325.18 Aligned_cols=262 Identities=24% Similarity=0.417 Sum_probs=202.7
Q ss_pred CCCCCCceeccccCeEEEEEEec-----------------CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-----------------NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKI 830 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l 830 (1057)
++|++.+.||+|+||.||+|... ++..||+|+++... .....++.+|++++++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 46889999999999999998532 24469999986543 3445788999999999999999999
Q ss_pred eeeeccCCeeEEEEEEccCCChhHHHhcCC----------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCe
Q 001544 831 ISSCSNEDFKALILEYMRNGSLEKCLYSGN----------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNV 900 (1057)
Q Consensus 831 ~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~----------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Ni 900 (1057)
++++..++..++||||+++|+|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCeecccCChheE
Confidence 999999999999999999999999987543 24678899999999999999999 99999999999999
Q ss_pred eeCCCCcEEEEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh--CCCCCCcccccc
Q 001544 901 LLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT--RRKPTDEIFSGE 978 (1057)
Q Consensus 901 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt--g~~p~~~~~~~~ 978 (1057)
++++++.++++|||+++.+.............++..|+|||....+.++.++|||||||++|||++ |..||......+
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ 241 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence 999999999999999986533222222222334678999998888889999999999999999998 667775422111
Q ss_pred cchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHH
Q 001544 979 MTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLK 1046 (1057)
Q Consensus 979 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1046 (1057)
++.. .......... ....+.+..++..+.+++.+||+.||++||++.|+++.|++
T Consensus 242 -----~~~~-----~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 242 -----VIEN-----TGEFFRDQGR---QVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred -----HHHH-----HHHHHhhccc---cccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1100 0011100000 00011122356788999999999999999999999998863
No 182
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.5e-35 Score=332.94 Aligned_cols=247 Identities=23% Similarity=0.315 Sum_probs=197.4
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCCeeEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSI-RHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
+|++.+.||+|+||+||+|... +++.||||+++... ......+..|.+++... +|++|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4778899999999999999865 57899999986542 22345567788888777 5899999999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
||+++|+|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~-- 154 (323)
T cd05616 81 EYVNGGDLMYQIQQVG-RFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD-- 154 (323)
T ss_pred cCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCCCceecCCC--
Confidence 9999999999887654 4889999999999999999999 999999999999999999999999999998753211
Q ss_pred ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccc
Q 001544 925 SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLIT 1004 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1057)
........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .. ...+.+...
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~--~~-----------~~~i~~~~~--- 218 (323)
T cd05616 155 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--EL-----------FQSIMEHNV--- 218 (323)
T ss_pred CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH--HH-----------HHHHHhCCC---
Confidence 12233456899999999999999999999999999999999999998652111 00 011111100
Q ss_pred cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCH-----HHHHHH
Q 001544 1005 EDKHFAAKEQCASSVFNLAMECTVESPDERITA-----KEIVRR 1043 (1057)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~evl~~ 1043 (1057)
..+...+.++.+++.+|++.||++|+++ .++.+|
T Consensus 219 -----~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 219 -----AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred -----CCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 1112356778999999999999999974 666554
No 183
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=5e-35 Score=316.77 Aligned_cols=248 Identities=30% Similarity=0.491 Sum_probs=200.7
Q ss_pred ceeccccCeEEEEEEecCCcEEEEEEeeccchh-HHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCCChh
Q 001544 775 NLIGRGSFGSVYIARLQNGIEVAVKTFDLQHER-AFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNGSLE 853 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~ 853 (1057)
++||+|+||.||+|...+++.||+|.++..... ....+.+|++++++++||||+++++++.+....++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 469999999999998777999999998655433 5678899999999999999999999999999999999999999999
Q ss_pred HHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccccccc
Q 001544 854 KCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA 933 (1057)
Q Consensus 854 ~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 933 (1057)
+++......+++..+..++.+++.|++||| +.+++||||||+||+++.++.+||+|||.+.................
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 157 (251)
T cd05041 81 TFLRKKKNRLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQI 157 (251)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcc
Confidence 999776666899999999999999999999 99999999999999999999999999999976532111111112223
Q ss_pred cccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHHH
Q 001544 934 TLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAK 1012 (1057)
Q Consensus 934 t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1057)
+..|+|||.+.++.++.++|+||+|+++|||+| |..||....... ....+.... ....+
T Consensus 158 ~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~--------------~~~~~~~~~------~~~~~ 217 (251)
T cd05041 158 PIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ--------------TRERIESGY------RMPAP 217 (251)
T ss_pred eeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH--------------HHHHHhcCC------CCCCC
Confidence 567999999988889999999999999999999 788875521110 111111100 01112
Q ss_pred HHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHH
Q 001544 1013 EQCASSVFNLAMECTVESPDERITAKEIVRRLL 1045 (1057)
Q Consensus 1013 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1045 (1057)
..++.++.+++.+|+..+|++||++.|+++.|+
T Consensus 218 ~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 218 QLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred ccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 345678999999999999999999999999886
No 184
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3.1e-35 Score=325.30 Aligned_cols=256 Identities=27% Similarity=0.448 Sum_probs=204.1
Q ss_pred hCCCCCCceeccccCeEEEEEEec------CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCee
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ------NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFK 840 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 840 (1057)
.++|+..+.||+|+||.||+|... ++..||+|++.... ......+.+|++++++++||||+++++++.+++..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 457888999999999999999753 46889999986543 33456788999999999999999999999999999
Q ss_pred EEEEEEccCCChhHHHhcCC---------------------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCC
Q 001544 841 ALILEYMRNGSLEKCLYSGN---------------------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSN 899 (1057)
Q Consensus 841 ~lV~E~~~~gsL~~~l~~~~---------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N 899 (1057)
++||||+++|+|.+++.... ..+++.+++.++.|++.||+||| +.+++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---~~~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCeecccccHhh
Confidence 99999999999999986422 24788889999999999999999 8999999999999
Q ss_pred eeeCCCCcEEEEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccc
Q 001544 900 VLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGE 978 (1057)
Q Consensus 900 ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~ 978 (1057)
|++++++.++++|||.+..+..............+..|+|||...+..++.++|||||||++|||++ |..||......
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~- 239 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE- 239 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence 9999999999999999876533222222223344667999999988899999999999999999998 77787542111
Q ss_pred cchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHH
Q 001544 979 MTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLK 1046 (1057)
Q Consensus 979 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1046 (1057)
++. ....+... ...+..++.++.+++.+|++.+|++||++.|+++.|++
T Consensus 240 ----~~~--------~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 240 ----EVI--------YYVRDGNV-------LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred ----HHH--------HHHhcCCC-------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 111 11111100 01112356789999999999999999999999999874
No 185
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.5e-35 Score=328.03 Aligned_cols=260 Identities=28% Similarity=0.439 Sum_probs=206.0
Q ss_pred CCCCCCceeccccCeEEEEEEec--------CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCC
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ--------NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSI-RHRNLTKIISSCSNED 838 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 838 (1057)
++|.+.+.||+|+||.||+|+.. .+..||+|.++... ......+.+|+++++++ +||||+++++++.+.+
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 46788899999999999999642 24579999986543 34456788999999999 6999999999999989
Q ss_pred eeEEEEEEccCCChhHHHhcCC---------------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC
Q 001544 839 FKALILEYMRNGSLEKCLYSGN---------------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD 903 (1057)
Q Consensus 839 ~~~lV~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~ 903 (1057)
..++||||+++|+|.+++.... ..+++.++.+++.|++.|++||| +++++||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE---SRRCIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeeccccceeEEEc
Confidence 9999999999999999986532 34889999999999999999999 99999999999999999
Q ss_pred CCCcEEEEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchh
Q 001544 904 DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLK 982 (1057)
Q Consensus 904 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~ 982 (1057)
+++.+|++|||.++...............++..|+|||.+.+..++.++||||||+++|||++ |..||......
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~----- 243 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE----- 243 (314)
T ss_pred CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH-----
Confidence 999999999999986532222111222234467999999988889999999999999999999 88887542110
Q ss_pred hhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHHHH
Q 001544 983 HWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRDFL 1051 (1057)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~ 1051 (1057)
...+...... ....+..++.++.+++.+|++.+|++||++.|+++.|+++....
T Consensus 244 ---------~~~~~~~~~~------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 297 (314)
T cd05099 244 ---------ELFKLLREGH------RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV 297 (314)
T ss_pred ---------HHHHHHHcCC------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence 0111111100 01112345667889999999999999999999999999987653
No 186
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=7.2e-35 Score=323.07 Aligned_cols=252 Identities=23% Similarity=0.345 Sum_probs=204.3
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
+.|++.++||+|+||.||+|... +++.||+|++........+.+.+|++++++++||||+++++++..+...++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 46888999999999999999865 58999999997766666788999999999999999999999999999999999999
Q ss_pred cCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccc
Q 001544 848 RNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT 927 (1057)
Q Consensus 848 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 927 (1057)
++++|..++.+....+++..+..++.|+++|++||| +.+++||||||+||+++.++.+||+|||.+..... ....
T Consensus 92 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~--~~~~ 166 (292)
T cd06644 92 PGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVK--TLQR 166 (292)
T ss_pred CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccceeccc--cccc
Confidence 999999888766667899999999999999999999 99999999999999999999999999999875421 1122
Q ss_pred cccccccccccCccccC-----CCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccc
Q 001544 928 QTQTLATLGYMAPEYGR-----EGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLL 1002 (1057)
Q Consensus 928 ~~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1057)
.....++..|+|||++. ...++.++|||||||++|||++|+.||...... ... .......
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~~~------------~~~~~~~-- 231 (292)
T cd06644 167 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-RVL------------LKIAKSE-- 231 (292)
T ss_pred cceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH-HHH------------HHHhcCC--
Confidence 23445788999999874 345688999999999999999999998652111 000 0010000
Q ss_pred cccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1003 ITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
......+..++.++.+++.+||+.+|++||++.|++++
T Consensus 232 ---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 232 ---PPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred ---CccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 00111122445678999999999999999999999875
No 187
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=5.4e-35 Score=318.19 Aligned_cols=252 Identities=29% Similarity=0.481 Sum_probs=202.1
Q ss_pred CCCCCCceeccccCeEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEcc
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMR 848 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 848 (1057)
++|.+.+.||+|++|.||+|..+.+..||+|.+.... ...+.+.+|++++++++|||++++++++.+ +..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEEcCC
Confidence 4578889999999999999998877789999886433 234678899999999999999999998854 56789999999
Q ss_pred CCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccc
Q 001544 849 NGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT 927 (1057)
Q Consensus 849 ~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 927 (1057)
+|+|.++++... ..+++..+..++.|++.||+||| +.+++||||||+||++++++.++|+|||.++...... ...
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~-~~~ 159 (260)
T cd05069 84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE-YTA 159 (260)
T ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccceEccCCc-ccc
Confidence 999999997643 45889999999999999999999 8999999999999999999999999999997653221 112
Q ss_pred cccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccccccc
Q 001544 928 QTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITED 1006 (1057)
Q Consensus 928 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1057)
.....++..|+|||...+..++.++||||+|+++|||++ |..||......+ ...+ +....
T Consensus 160 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~------------~~~~~----- 220 (260)
T cd05069 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE--VLEQ------------VERGY----- 220 (260)
T ss_pred cCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHH------------HHcCC-----
Confidence 222345678999999988889999999999999999999 888886522111 0011 10000
Q ss_pred hhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHH
Q 001544 1007 KHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLK 1046 (1057)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1046 (1057)
..+.+...+..+.+++.+||+.+|++||++.++++.|++
T Consensus 221 -~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 221 -RMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred -CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 001113456779999999999999999999999999875
No 188
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3.1e-35 Score=323.95 Aligned_cols=252 Identities=27% Similarity=0.407 Sum_probs=206.6
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
++|++.+.||+|+||.||+|... ++..||+|+++.......+.+.+|++++++++||||+++++++..+...++||||+
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFC 84 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeecc
Confidence 46888899999999999999864 68999999998766666788999999999999999999999999999999999999
Q ss_pred cCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccc
Q 001544 848 RNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT 927 (1057)
Q Consensus 848 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 927 (1057)
++++|.+++...+..+++.++..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||.+...... ...
T Consensus 85 ~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~--~~~ 159 (280)
T cd06611 85 DGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST--LQK 159 (280)
T ss_pred CCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccchhhccc--ccc
Confidence 999999999876667999999999999999999999 999999999999999999999999999998754221 122
Q ss_pred cccccccccccCccccC-----CCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccc
Q 001544 928 QTQTLATLGYMAPEYGR-----EGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLL 1002 (1057)
Q Consensus 928 ~~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1057)
.....++..|+|||.+. ...++.++|+||+|+++|||++|+.||......+ .. ......
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~-~~------------~~~~~~--- 223 (280)
T cd06611 160 RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR-VL------------LKILKS--- 223 (280)
T ss_pred cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH-HH------------HHHhcC---
Confidence 23446788999999864 3456789999999999999999999986531110 00 011000
Q ss_pred cccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1003 ITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.......+..++.++.+++.+||+.+|++||++.+++++
T Consensus 224 --~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 224 --EPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred --CCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 000111123456778999999999999999999999987
No 189
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.3e-34 Score=315.27 Aligned_cols=239 Identities=21% Similarity=0.377 Sum_probs=191.0
Q ss_pred ceeccccCeEEEEEEecC-------------CcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeE
Q 001544 775 NLIGRGSFGSVYIARLQN-------------GIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKA 841 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 841 (1057)
+.||+|+||.||+|...+ ...||+|++..........+.+|+.++++++||||+++++++..+...+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 468999999999997532 2358999887665566678889999999999999999999999988999
Q ss_pred EEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc-------EEEEccc
Q 001544 842 LILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMV-------AHLSDFG 914 (1057)
Q Consensus 842 lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~-------~kl~Dfg 914 (1057)
+||||+++|+|+.++......+++..+..++.||++|++||| +++|+||||||+||+++.++. ++++|||
T Consensus 81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g 157 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPG 157 (262)
T ss_pred EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh---hCCeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence 999999999999998776667999999999999999999999 999999999999999987664 8999999
Q ss_pred ccccccCCCCccccccccccccccCccccC-CCCCCccchHHHHHHHHHHHh-hCCCCCCcccccccchhhhhhhccchh
Q 001544 915 IAKLLIGEDQSMTQTQTLATLGYMAPEYGR-EGRVSTKGDVYSFGILLMETF-TRRKPTDEIFSGEMTLKHWVNDFLPIS 992 (1057)
Q Consensus 915 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Dv~s~G~il~ell-tg~~p~~~~~~~~~~~~~~~~~~~~~~ 992 (1057)
.+..... .....++..|+|||.+. +..++.++|||||||++|||+ +|..||......+
T Consensus 158 ~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-------------- 217 (262)
T cd05077 158 IPITVLS------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE-------------- 217 (262)
T ss_pred CCccccC------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH--------------
Confidence 9875421 12345678899999876 466899999999999999998 5777765421110
Q ss_pred HHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 993 MMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
.......... .....+.++.+++.+||+.||++||++.++++++
T Consensus 218 ~~~~~~~~~~--------~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 218 KERFYEGQCM--------LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred HHHHHhcCcc--------CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 0000000000 0011245688999999999999999999999876
No 190
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=3.7e-35 Score=322.92 Aligned_cols=255 Identities=25% Similarity=0.408 Sum_probs=204.3
Q ss_pred hCCCCCCceeccccCeEEEEEEec------CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCee
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ------NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFK 840 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 840 (1057)
.++|++.+.||+|+||.||+|... .+..||+|.+.... ......+.+|++++++++||||+++++++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 357888899999999999999754 24689999986443 34456788999999999999999999999999999
Q ss_pred EEEEEEccCCChhHHHhcCC---------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEE
Q 001544 841 ALILEYMRNGSLEKCLYSGN---------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLS 911 (1057)
Q Consensus 841 ~lV~E~~~~gsL~~~l~~~~---------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 911 (1057)
++||||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||++++++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccChheEEEcCCCCEEEC
Confidence 99999999999999986432 24688899999999999999999 9999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccc
Q 001544 912 DFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLP 990 (1057)
Q Consensus 912 Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 990 (1057)
|||+++.+.............++..|+|||...++.++.++|||||||++||+++ |..||......
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~------------- 228 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE------------- 228 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH-------------
Confidence 9999986543322222233446778999999988889999999999999999998 88887542111
Q ss_pred hhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHH
Q 001544 991 ISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLL 1045 (1057)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1045 (1057)
...+...... ....+..++.++.+++.+||+.+|++|||+.|+++.|+
T Consensus 229 -~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 229 -EVLKFVIDGG------HLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred -HHHHHHhcCC------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 0111111000 11111234678899999999999999999999999876
No 191
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5.4e-35 Score=333.70 Aligned_cols=267 Identities=22% Similarity=0.263 Sum_probs=198.3
Q ss_pred HhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc--chhHHHHHHHHHHHHHhcCCCCceeEeeeeccC------
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ--HERAFKSFDTECEVMKSIRHRNLTKIISSCSNE------ 837 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 837 (1057)
..++|++.+.||+|+||.||+|... +|+.||||++... .......+.+|+.++++++||||+++++++...
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 4578999999999999999999864 6899999998643 234456788999999999999999999988543
Q ss_pred CeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccc
Q 001544 838 DFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAK 917 (1057)
Q Consensus 838 ~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~ 917 (1057)
...|+||||+++ ++.+.+.. .+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~ 171 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 171 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc---cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEecCCCcc
Confidence 357999999976 56655542 3788899999999999999999 9999999999999999999999999999997
Q ss_pred cccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccc--hh---
Q 001544 918 LLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLP--IS--- 992 (1057)
Q Consensus 918 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~--~~--- 992 (1057)
.... ........+|..|+|||.+.+..++.++||||+||++|||++|+.||......+ .+......... ..
T Consensus 172 ~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~ 247 (359)
T cd07876 172 TACT---NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHID-QWNKVIEQLGTPSAEFMN 247 (359)
T ss_pred cccc---CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCcHHHHH
Confidence 5422 122334568899999999999899999999999999999999999997532110 01100000000 00
Q ss_pred -----HHHhhhccccccc------------chhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 993 -----MMKIIDANLLITE------------DKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 993 -----~~~~~~~~~~~~~------------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
............. ..........+.++.+++.+|++.||++|||+.|+++|-
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 316 (359)
T cd07876 248 RLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHP 316 (359)
T ss_pred HHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCc
Confidence 0000000000000 000000112356789999999999999999999999874
No 192
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=5.1e-35 Score=322.02 Aligned_cols=260 Identities=24% Similarity=0.370 Sum_probs=208.5
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCc----EEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGI----EVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKAL 842 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 842 (1057)
.+|++.+.||+|+||.||+|..+ +|. .||+|...... ......+.+|++++++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 46788899999999999999854 333 68999886543 3445788899999999999999999999887 78899
Q ss_pred EEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCC
Q 001544 843 ILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 922 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 922 (1057)
||||+++|+|.+++......+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||.++.....
T Consensus 86 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~ 162 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVD 162 (279)
T ss_pred EEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCcccccccCc
Confidence 99999999999999887767999999999999999999999 899999999999999999999999999999876433
Q ss_pred CCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhccc
Q 001544 923 DQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANL 1001 (1057)
Q Consensus 923 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1057)
..........++..|+|||......++.++|+||||+++||+++ |+.||...... + ....+....
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~---------~~~~~~~~~ 228 (279)
T cd05057 163 EKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV-----E---------IPDLLEKGE 228 (279)
T ss_pred ccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH-----H---------HHHHHhCCC
Confidence 22222222234568999999888889999999999999999998 99998652111 1 111111100
Q ss_pred ccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHHHHh
Q 001544 1002 LITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRDFLL 1052 (1057)
Q Consensus 1002 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~ 1052 (1057)
..+.+..++..+.+++.+||..+|.+||++.++++.++++.+...
T Consensus 229 ------~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (279)
T cd05057 229 ------RLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDPQ 273 (279)
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCCc
Confidence 111112345678899999999999999999999999999876543
No 193
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=4.9e-35 Score=329.71 Aligned_cols=255 Identities=22% Similarity=0.294 Sum_probs=199.4
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc---chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ---HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
++|++.+.||+|+||+||+|+.. +++.||||++... .....+.+.+|+.++..++|+||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 46889999999999999999865 6899999999642 2234466888999999999999999999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
||+++|+|.+++.+....+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 156 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG- 156 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCC-
Confidence 999999999999776666899999999999999999999 9999999999999999999999999999987653222
Q ss_pred ccccccccccccccCccccCC-----CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhc
Q 001544 925 SMTQTQTLATLGYMAPEYGRE-----GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDA 999 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1057)
........||+.|+|||++.. ..++.++||||+||++|||++|+.||...... +. ...+...
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~-----~~--------~~~i~~~ 223 (331)
T cd05597 157 TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV-----ET--------YGKIMNH 223 (331)
T ss_pred CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHH-----HH--------HHHHHcC
Confidence 122233468999999998763 45788999999999999999999998652111 00 0011100
Q ss_pred ccccccchhhHHHHHHHHHHHHHHhHcccCCCCC--CCCHHHHHHH
Q 001544 1000 NLLITEDKHFAAKEQCASSVFNLAMECTVESPDE--RITAKEIVRR 1043 (1057)
Q Consensus 1000 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~~ 1043 (1057)
..... .......++.++.+++.+|+..++++ ||++.++++|
T Consensus 224 ~~~~~---~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 224 KEHFQ---FPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CCccc---CCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 00000 00011235677889999987654443 8899999988
No 194
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-38 Score=358.54 Aligned_cols=483 Identities=31% Similarity=0.341 Sum_probs=331.3
Q ss_pred eecccccccCCCCccccccCCCCeEeccCCCCCCCCCcccccCCCCCceeEccCCcccccCchhhhccccCCeeEeeccC
Q 001544 124 LLLHNNFLTGTIPFSIFKLSSLLDLKLSDNNLTGTIPSHNLGNLSSLQLLDLSDNQLSGSIPSFIFKISSLQALHFGNNR 203 (1057)
Q Consensus 124 L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~ 203 (1057)
+|++..++. .||..+..-..|+.|++++|-+. ..|-....+.-+|+.||+++|+++ ..|..+..+.+|+.|.++.|-
T Consensus 3 vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l-~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~ 79 (1081)
T KOG0618|consen 3 VDASDEQLE-LIPEQILNNEALQILNLRRNSLL-SRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNY 79 (1081)
T ss_pred cccccccCc-ccchhhccHHHHHhhhccccccc-cCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhh
Confidence 556666666 56666655555777777777665 333223333444777777777666 566666666677777776666
Q ss_pred CccccCccccCCCCcccEEEeeccccccCccccccCCCCCcEEEccCCCCcCCccccccCcCCCcEEeeeccccccccCc
Q 001544 204 LSGELPANICDNLPFLNFFSVYKNMFYGGISSTLSNCKHLRILDLSFNDLWGDIPKEIGNLTKLKELFLDFNILQGEIPH 283 (1057)
Q Consensus 204 l~~~~p~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 283 (1057)
+. .+| ...+++++|++|.|.+|.+. ..|..+..+.+|++|++++|++. .+|.
T Consensus 80 i~-~vp-------------------------~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl 131 (1081)
T KOG0618|consen 80 IR-SVP-------------------------SSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPL 131 (1081)
T ss_pred Hh-hCc-------------------------hhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCch
Confidence 65 333 23466777777777777775 56777777777777777777776 6677
Q ss_pred cccccccccEEEeecCccccccCccccccccccEEEecCCccccCCCCCcccCCCCCce-EEecCccccccCCccccccc
Q 001544 284 TVGNLHNLEYLSLVNNELVGTVPATIFNVSTLKLIELSNNTFFGSLPSSTDVQLPNLEE-LYLWGNNFSGTLPSFIFNAS 362 (1057)
Q Consensus 284 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~-L~L~~N~l~~~~~~~~~~l~ 362 (1057)
.+..++.++.+..++|......+.. .++.+++..|.+.+.++... ..|++ |+|++|.+. -..+.++.
T Consensus 132 ~i~~lt~~~~~~~s~N~~~~~lg~~-----~ik~~~l~~n~l~~~~~~~i----~~l~~~ldLr~N~~~---~~dls~~~ 199 (1081)
T KOG0618|consen 132 VIEVLTAEEELAASNNEKIQRLGQT-----SIKKLDLRLNVLGGSFLIDI----YNLTHQLDLRYNEME---VLDLSNLA 199 (1081)
T ss_pred hHHhhhHHHHHhhhcchhhhhhccc-----cchhhhhhhhhcccchhcch----hhhheeeecccchhh---hhhhhhcc
Confidence 7777777777777777222222221 16666777776666555443 23333 777777765 12345566
Q ss_pred cccccccccccccccccchhcccccccEEeccCcccCCCccccccccCCCcchhhhhccCCCcccccccccccccccccE
Q 001544 363 NLSKLSLGDNSFSGLIPNTFGNLRNLKRLRLYNNYLTSPELSFLSSLSNCKYLEIIALSGNPLNGIIPMSAGNLSHSLEE 442 (1057)
Q Consensus 363 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~ 442 (1057)
+|+.|....|+++... -..++|+.|+.+.|.+++... ...-.+|+.+|+|.|++++.. ..++.. .+|+.
T Consensus 200 ~l~~l~c~rn~ls~l~----~~g~~l~~L~a~~n~l~~~~~-----~p~p~nl~~~dis~n~l~~lp-~wi~~~-~nle~ 268 (1081)
T KOG0618|consen 200 NLEVLHCERNQLSELE----ISGPSLTALYADHNPLTTLDV-----HPVPLNLQYLDISHNNLSNLP-EWIGAC-ANLEA 268 (1081)
T ss_pred chhhhhhhhcccceEE----ecCcchheeeeccCcceeecc-----ccccccceeeecchhhhhcch-HHHHhc-ccceE
Confidence 7777777777776432 234567777777777764322 122345666777777776543 333333 45777
Q ss_pred EEcCCCcccccccccccCccCCcEEEccCCcCCCCCCcccccccccceeecccccCcccCCcccccccc-cceEEecCee
Q 001544 443 LFMPDCNVSGRIPKEIGNLANLVTLDLGGNKFNGSIPIALGKLQKLQLLNLDDNKLEGSIPDDICGLVE-LYKLALGDNK 521 (1057)
Q Consensus 443 L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~ 521 (1057)
+...+|++ ..+|..+...++|+.|++..|.+. -+|....+++.|++|+|..|+|...++..|.-+.. |..|..+.|+
T Consensus 269 l~~n~N~l-~~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~ 346 (1081)
T KOG0618|consen 269 LNANHNRL-VALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNK 346 (1081)
T ss_pred ecccchhH-HhhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhcc
Confidence 77777766 356666666677777777777766 45666666777777777777776433333333333 5666666666
Q ss_pred eeecCCccccCcccccccccCCccccccccccccccccccEEEeccccccCCCchhhccccccceecccccccccccccc
Q 001544 522 LSGQIPACFGNLASLRELWLGPNELISFIPSTFWNIKDIMYVNFSSNFLTGPLPLEIENLKALTTLDFSMNNLSGVIPTT 601 (1057)
Q Consensus 522 i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 601 (1057)
+.......-..++.|+.|++.+|.++.-.-..+.+..+|+.|+|++|++.......+.++..|+.|+||+|+|+ .+|..
T Consensus 347 l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~t 425 (1081)
T KOG0618|consen 347 LSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDT 425 (1081)
T ss_pred ccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHH
Confidence 66433222345678999999999999988888999999999999999999766677889999999999999998 78899
Q ss_pred ccCccccceecccccccccccCccccccCccceecccCccccCC-CcccccCcccccccccCCCcc
Q 001544 602 IGGLKGLQYLFLGHNRLQGSIPDSVGDLISLKSLNLSNNNLSGP-IPTSLEKLSDLKELNLSFNKL 666 (1057)
Q Consensus 602 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~l~ls~N~l 666 (1057)
+..++.|++|...+|+|. ..| .+..+++|+.+|+|.|+|+.. +|..+ .-++|++|||+||..
T Consensus 426 va~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~-p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 426 VANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEAL-PSPNLKYLDLSGNTR 488 (1081)
T ss_pred HHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhC-CCcccceeeccCCcc
Confidence 999999999999999999 778 799999999999999999854 34443 338999999999985
No 195
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=7.4e-36 Score=334.89 Aligned_cols=238 Identities=27% Similarity=0.365 Sum_probs=192.7
Q ss_pred ceeccccCeEEEEEEe----cCCcEEEEEEeeccch--hHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEcc
Q 001544 775 NLIGRGSFGSVYIARL----QNGIEVAVKTFDLQHE--RAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMR 848 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 848 (1057)
+.||+|+||.||+++. .+|+.||+|+++.... .....+.+|++++++++||||+++++++.+.+..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 6799999999999864 3589999999965432 234567789999999999999999999999999999999999
Q ss_pred CCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcccc
Q 001544 849 NGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQ 928 (1057)
Q Consensus 849 ~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 928 (1057)
+|+|.+++.... .+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++..... ....
T Consensus 82 ~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~--~~~~ 155 (318)
T cd05582 82 GGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH--EKKA 155 (318)
T ss_pred CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC--CCce
Confidence 999999986644 5899999999999999999999 999999999999999999999999999998764322 1122
Q ss_pred ccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchh
Q 001544 929 TQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKH 1008 (1057)
Q Consensus 929 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1057)
....|++.|+|||.+.+..++.++|||||||++|||++|+.||...... .. ...+....
T Consensus 156 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~-----~~--------~~~i~~~~-------- 214 (318)
T cd05582 156 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK-----ET--------MTMILKAK-------- 214 (318)
T ss_pred ecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH-----HH--------HHHHHcCC--------
Confidence 3356899999999998888999999999999999999999998652111 00 00111100
Q ss_pred hHHHHHHHHHHHHHHhHcccCCCCCCCCHHH
Q 001544 1009 FAAKEQCASSVFNLAMECTVESPDERITAKE 1039 (1057)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e 1039 (1057)
...+..++.++.+++.+||+.||++||++.+
T Consensus 215 ~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 215 LGMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 0111235677889999999999999999544
No 196
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=5.3e-35 Score=317.51 Aligned_cols=248 Identities=31% Similarity=0.469 Sum_probs=200.3
Q ss_pred CCCCCCceeccccCeEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeee-ccCCeeEEEEEEc
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSC-SNEDFKALILEYM 847 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lV~E~~ 847 (1057)
.+|++.+.||+|+||.||+|... |..||+|.++... ..+.+.+|+.++++++|+|++++++++ .++...++||||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 46888899999999999999766 7889999986433 346788999999999999999999975 4556789999999
Q ss_pred cCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 848 RNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 848 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
++++|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||++++++.+|++|||++.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~--- 156 (256)
T cd05082 83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--- 156 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCccceeccccC---
Confidence 9999999987654 35889999999999999999999 9999999999999999999999999999987542211
Q ss_pred ccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhccccccc
Q 001544 927 TQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITE 1005 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1057)
....++..|+|||+..+..++.++||||+||++|||++ |+.||.... .... ...+....
T Consensus 157 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~-----~~~~---------~~~~~~~~---- 216 (256)
T cd05082 157 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----LKDV---------VPRVEKGY---- 216 (256)
T ss_pred --CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC-----HHHH---------HHHHhcCC----
Confidence 22234568999999988889999999999999999998 888875421 1111 01111100
Q ss_pred chhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHh
Q 001544 1006 DKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKI 1047 (1057)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 1047 (1057)
.......++..+.+++.+|++.+|++|||+.+++++|+++
T Consensus 217 --~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 217 --KMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred --CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 0011124567889999999999999999999999998864
No 197
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=8.5e-35 Score=316.17 Aligned_cols=248 Identities=26% Similarity=0.415 Sum_probs=200.6
Q ss_pred ceeccccCeEEEEEEecC--C--cEEEEEEeeccch-hHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccC
Q 001544 775 NLIGRGSFGSVYIARLQN--G--IEVAVKTFDLQHE-RAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRN 849 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 849 (1057)
++||+|++|.||+|.+.+ + ..||||.++.... ...+++.+|++++++++||||+++++++.+ ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999998643 3 3699999976655 567889999999999999999999999988 888999999999
Q ss_pred CChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc-cc
Q 001544 850 GSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MT 927 (1057)
Q Consensus 850 gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~~ 927 (1057)
++|.+++.... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||+++........ ..
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 156 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM 156 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHH---hCCccccccCcccEEEecCCEEEeccccccccccccccceec
Confidence 99999997765 56899999999999999999999 999999999999999999999999999999876432221 11
Q ss_pred cccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccccccc
Q 001544 928 QTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITED 1006 (1057)
Q Consensus 928 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1057)
.....++..|+|||...+..++.++|||||||++|||++ |+.||......+ ..+.+....
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--------------~~~~~~~~~----- 217 (257)
T cd05040 157 EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ--------------ILKKIDKEG----- 217 (257)
T ss_pred ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH--------------HHHHHHhcC-----
Confidence 223456778999999988889999999999999999999 999986421111 001111000
Q ss_pred hhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHH
Q 001544 1007 KHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLL 1045 (1057)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1045 (1057)
.....+..++..+.+++.+|++.+|++||++.|+++.|.
T Consensus 218 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 218 ERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 011112235677899999999999999999999999875
No 198
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-36 Score=326.08 Aligned_cols=246 Identities=29% Similarity=0.394 Sum_probs=202.0
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc---chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ---HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
.|...+.||.|+||.||.|++. +.+.||||++.-. ....++++..|++++.+++|||++.+.|+|-.+...++|||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 3556688999999999999854 6889999998543 34567899999999999999999999999999999999999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
||-| +-.|.+.-.++++-+.++..|+.+.++||+||| +.+.||||||+.|||+++.|.||++|||.|..+.
T Consensus 107 YClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~----- 177 (948)
T KOG0577|consen 107 YCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMA----- 177 (948)
T ss_pred HHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccchhhcC-----
Confidence 9955 888887777778999999999999999999999 9999999999999999999999999999998763
Q ss_pred cccccccccccccCcccc---CCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccc
Q 001544 926 MTQTQTLATLGYMAPEYG---REGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLL 1002 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~---~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1057)
+....+|||.|||||++ ..+.|+-|+||||+|+++.|+...++|.-.+ .....+.+ +.....
T Consensus 178 -PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnM-NAMSALYH------------IAQNes- 242 (948)
T KOG0577|consen 178 -PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-NAMSALYH------------IAQNES- 242 (948)
T ss_pred -chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCc-hHHHHHHH------------HHhcCC-
Confidence 33456899999999976 4678999999999999999999999995321 00001111 110000
Q ss_pred cccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 1003 ITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
..-...+.+..|..|+..|++.-|.+|||..++++|-
T Consensus 243 -----PtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~ 279 (948)
T KOG0577|consen 243 -----PTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHR 279 (948)
T ss_pred -----CCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcc
Confidence 0011235577899999999999999999999999874
No 199
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.7e-35 Score=337.98 Aligned_cols=266 Identities=19% Similarity=0.197 Sum_probs=199.9
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
..+|.+.+.||+|+||.||+|... .++.||||... ...+.+|++++++++|+||+++++++..++..++|||+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 457899999999999999999865 57899999642 23456899999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 847 MRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
+. ++|.+++......+++.++..|+.|+++||+||| +++|+||||||+||+++.++.+||+|||+++.........
T Consensus 242 ~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~ 317 (461)
T PHA03211 242 YR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTP 317 (461)
T ss_pred cC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccc
Confidence 95 6888888766667999999999999999999999 9999999999999999999999999999998654322222
Q ss_pred ccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccc--c----chhhhhhhc-------cc---
Q 001544 927 TQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGE--M----TLKHWVNDF-------LP--- 990 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~--~----~~~~~~~~~-------~~--- 990 (1057)
......||..|+|||++.+..++.++|||||||++|||++|..|+-...... . .+...+... ..
T Consensus 318 ~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~ 397 (461)
T PHA03211 318 FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAG 397 (461)
T ss_pred cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcc
Confidence 2234568999999999999999999999999999999999887643211110 0 011111000 00
Q ss_pred hhHHHhhhcc-----cccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 991 ISMMKIIDAN-----LLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 991 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
......+... ........+........++.+++.+||+.||++|||+.|+++|
T Consensus 398 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 398 SRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred hHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0000000000 0000001111112344578899999999999999999999987
No 200
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=5.2e-35 Score=317.42 Aligned_cols=249 Identities=21% Similarity=0.332 Sum_probs=202.5
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc-chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ-HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
+|++.+.||+|+||.||++... +++.||+|.++.. .....+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4778899999999999999865 6899999998643 3345677889999999999999999999999999999999999
Q ss_pred cCCChhHHHhcC-CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 848 RNGSLEKCLYSG-NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 848 ~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
++|+|.+++... ...+++..+..++.|++.|++||| +.+|+|+||||+||++++++.++++|||.+....... .
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~--~ 155 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG--A 155 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccCcceeecccc--c
Confidence 999999988653 345889999999999999999999 9999999999999999999999999999997653221 1
Q ss_pred ccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccc
Q 001544 927 TQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITED 1006 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1057)
......++..|+|||+..+..++.++|+||+|+++|+|++|+.||..... .... .......
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-----~~~~--------~~~~~~~------ 216 (255)
T cd08219 156 YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW-----KNLI--------LKVCQGS------ 216 (255)
T ss_pred ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH-----HHHH--------HHHhcCC------
Confidence 22335678899999999888899999999999999999999999865211 0000 0000000
Q ss_pred hhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1007 KHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
..+.+..++..+.+++.+||+.||++||++.|++..
T Consensus 217 -~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 217 -YKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred -CCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 001112345678899999999999999999999864
No 201
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-36 Score=327.95 Aligned_cols=249 Identities=25% Similarity=0.412 Sum_probs=207.7
Q ss_pred CCceeccccCeEEEEEEec--CC--cEEEEEEeeccchh-HHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 773 ENNLIGRGSFGSVYIARLQ--NG--IEVAVKTFDLQHER-AFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 773 ~~~~lg~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
..++||+|+||+|++|.|. +| ..||||.++..... ...+|.+|+.+|-+++|||++++||...+ ....+|||.+
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELa 192 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELA 192 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhc
Confidence 4478999999999999876 34 46899999765543 67899999999999999999999999987 6668999999
Q ss_pred cCCChhHHHhc-CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 848 RNGSLEKCLYS-GNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 848 ~~gsL~~~l~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
+.|+|.+.+++ .+..+-......++.|||.|+.||. +++.||||+..+|+++-....+||+|||+.+-+...+..+
T Consensus 193 plGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Y 269 (1039)
T KOG0199|consen 193 PLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMY 269 (1039)
T ss_pred ccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeecccceeccCCCCcce
Confidence 99999999998 4467888889999999999999999 9999999999999999999999999999999876544433
Q ss_pred cc-ccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccccc
Q 001544 927 TQ-TQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLIT 1004 (1057)
Q Consensus 927 ~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1057)
.. ....-.+.|+|||.+....++.++|||+|||++|||+| |..||-. .....+.+.+|
T Consensus 270 vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G--------------~~g~qIL~~iD------ 329 (1039)
T KOG0199|consen 270 VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVG--------------CRGIQILKNID------ 329 (1039)
T ss_pred EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCC--------------CCHHHHHHhcc------
Confidence 32 33344668999999999999999999999999999999 5567644 11223344444
Q ss_pred cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHH
Q 001544 1005 EDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLL 1045 (1057)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1045 (1057)
.+.+.+.++.|+++++++++.||...|++|||+..+.+.+-
T Consensus 330 ~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~ 370 (1039)
T KOG0199|consen 330 AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLV 370 (1039)
T ss_pred ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHH
Confidence 22345556789999999999999999999999999985553
No 202
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=3.2e-35 Score=320.13 Aligned_cols=253 Identities=29% Similarity=0.459 Sum_probs=200.4
Q ss_pred CCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHH--HHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 771 FSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAF--KSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~--~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
|+..+.||+|+||+||+|... +++.||+|++........ ....+|+.++++++||||+++++++.+.+..++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 556789999999999999866 567899999976654322 23456999999999999999999999999999999999
Q ss_pred cCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccc
Q 001544 848 RNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT 927 (1057)
Q Consensus 848 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 927 (1057)
++++|.+++... ..+++.++..++.|+++||+||| +.+|+||||||+||++++++.++|+|||.+..+ ......
T Consensus 81 ~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~--~~~~~~ 154 (260)
T PF00069_consen 81 PGGSLQDYLQKN-KPLSEEEILKIAYQILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFGSSVKL--SENNEN 154 (260)
T ss_dssp TTEBHHHHHHHH-SSBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGTTTEES--TSTTSE
T ss_pred cccccccccccc-ccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc--cccccc
Confidence 999999999832 34899999999999999999999 899999999999999999999999999999754 122334
Q ss_pred cccccccccccCccccC-CCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccc
Q 001544 928 QTQTLATLGYMAPEYGR-EGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITED 1006 (1057)
Q Consensus 928 ~~~~~~t~~y~aPE~~~-~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1057)
.....++..|+|||+.. +..++.++||||+|+++|+|++|..||...... .. ...+.........
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~--~~------------~~~~~~~~~~~~~ 220 (260)
T PF00069_consen 155 FNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD--DQ------------LEIIEKILKRPLP 220 (260)
T ss_dssp BSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH--HH------------HHHHHHHHHTHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccch--hh------------hhhhhhccccccc
Confidence 45567889999999988 888999999999999999999999998763100 00 0000000000000
Q ss_pred hhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1007 KHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
...........++.+++.+|++.||++||++.+++++
T Consensus 221 ~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 221 SSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp HHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred ccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000011123789999999999999999999999875
No 203
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=5.7e-35 Score=340.21 Aligned_cols=264 Identities=24% Similarity=0.310 Sum_probs=192.7
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccC--------C
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNE--------D 838 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------~ 838 (1057)
..+|++.++||+|+||+||+|... +++.||||++.... ....+|+.++++++||||+++++++... .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 457999999999999999999864 68999999885432 2335799999999999999998876321 2
Q ss_pred eeEEEEEEccCCChhHHHhc---CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC-cEEEEccc
Q 001544 839 FKALILEYMRNGSLEKCLYS---GNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM-VAHLSDFG 914 (1057)
Q Consensus 839 ~~~lV~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfg 914 (1057)
..++||||+++ ++.+++.. ....+++..+..++.||+.||+||| +.+|+||||||+||+++.++ .+||+|||
T Consensus 141 ~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 141 FLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred EEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceeeeccc
Confidence 46789999975 67666542 3356899999999999999999999 99999999999999999664 79999999
Q ss_pred ccccccCCCCccccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhcc--ch
Q 001544 915 IAKLLIGEDQSMTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFL--PI 991 (1057)
Q Consensus 915 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~--~~ 991 (1057)
+|+.+.... ......+|+.|+|||++.+ ..++.++||||+||++|||++|++||......+ .+........ ..
T Consensus 217 la~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~-~~~~i~~~~~~p~~ 292 (440)
T PTZ00036 217 SAKNLLAGQ---RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD-QLVRIIQVLGTPTE 292 (440)
T ss_pred cchhccCCC---CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCH
Confidence 998653222 2234567899999998765 468999999999999999999999986532111 1111111000 00
Q ss_pred hHHHhhhccc-----c--cccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 992 SMMKIIDANL-----L--ITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 992 ~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.......... . .........+...+.++.+++.+||.+||.+|||+.|+++|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 293 DQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred HHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 0000000000 0 00000111122346789999999999999999999999976
No 204
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=5e-35 Score=319.92 Aligned_cols=253 Identities=25% Similarity=0.357 Sum_probs=201.6
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
++|++.+.||+|+||.||+|... +++.||+|+++.........+.+|+.+++.++||||+++++++.+++..++||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 46777899999999999999754 68999999997665555667889999999999999999999999999999999999
Q ss_pred cCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccc
Q 001544 848 RNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT 927 (1057)
Q Consensus 848 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 927 (1057)
++++|.+++...+ .+++.++..++.|++.|++||| +.+++||||||+||+++.++.++|+|||.+...... ...
T Consensus 89 ~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~--~~~ 162 (267)
T cd06645 89 GGGSLQDIYHVTG-PLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT--IAK 162 (267)
T ss_pred CCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc--ccc
Confidence 9999999886554 5899999999999999999999 899999999999999999999999999998765321 122
Q ss_pred cccccccccccCccccC---CCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccc
Q 001544 928 QTQTLATLGYMAPEYGR---EGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLIT 1004 (1057)
Q Consensus 928 ~~~~~~t~~y~aPE~~~---~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1057)
.....|+..|+|||++. ...++.++||||+||++|||++|+.||........... .......
T Consensus 163 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~-------------~~~~~~~-- 227 (267)
T cd06645 163 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFL-------------MTKSNFQ-- 227 (267)
T ss_pred cccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHh-------------hhccCCC--
Confidence 23456889999999874 45578899999999999999999999754221110000 0000000
Q ss_pred cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1005 EDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.........++..+.+++.+|++.+|++||++.++++|
T Consensus 228 -~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 228 -PPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred -CCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 00001111245568899999999999999999999875
No 205
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=2.9e-35 Score=330.94 Aligned_cols=248 Identities=25% Similarity=0.338 Sum_probs=196.1
Q ss_pred ceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCCeeEEEEEEccC
Q 001544 775 NLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSI-RHRNLTKIISSCSNEDFKALILEYMRN 849 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~~~~ 849 (1057)
++||+|+||+||+|... +++.||||+++... ....+.+.+|+.++.++ +||+|+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999865 67899999997542 23456688899999888 699999999999999999999999999
Q ss_pred CChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccc
Q 001544 850 GSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQT 929 (1057)
Q Consensus 850 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 929 (1057)
|+|.+++...+ .+++..+..++.|++.|++||| +++|+||||||+||+++.++.+||+|||+++..... .....
T Consensus 81 ~~L~~~~~~~~-~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~--~~~~~ 154 (327)
T cd05617 81 GDLMFHMQRQR-KLPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP--GDTTS 154 (327)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCC--CCcee
Confidence 99998886544 5899999999999999999999 999999999999999999999999999998753211 11223
Q ss_pred cccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccc-cchhhhhhhccchhHHHhhhcccccccchh
Q 001544 930 QTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGE-MTLKHWVNDFLPISMMKIIDANLLITEDKH 1008 (1057)
Q Consensus 930 ~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1057)
...||+.|+|||++.+..++.++||||+||++|||++|+.||....... .....+. ...+... .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~--------~~~~~~~-------~ 219 (327)
T cd05617 155 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYL--------FQVILEK-------P 219 (327)
T ss_pred cccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHH--------HHHHHhC-------C
Confidence 4568999999999999999999999999999999999999996432211 1111111 1111000 0
Q ss_pred hHHHHHHHHHHHHHHhHcccCCCCCCCCH------HHHHHH
Q 001544 1009 FAAKEQCASSVFNLAMECTVESPDERITA------KEIVRR 1043 (1057)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~------~evl~~ 1043 (1057)
...+...+..+.+++.+|++.||++|+++ .++++|
T Consensus 220 ~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 220 IRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 01122345678899999999999999984 566655
No 206
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=6.1e-35 Score=318.13 Aligned_cols=254 Identities=30% Similarity=0.516 Sum_probs=205.7
Q ss_pred hCCCCCCceeccccCeEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
.++|++.++||+|+||.||+|..++++.||||.+..... ..+++.+|++++++++||||+++++++......++||||+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence 457888999999999999999988888999999865432 3467899999999999999999999999889999999999
Q ss_pred cCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 848 RNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 848 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
++++|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+||++++++.+|++|||.++..... ...
T Consensus 84 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~-~~~ 159 (261)
T cd05034 84 SKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDD-EYT 159 (261)
T ss_pred CCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECccccceeccch-hhh
Confidence 9999999997654 46899999999999999999999 899999999999999999999999999998765321 111
Q ss_pred ccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhccccccc
Q 001544 927 TQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITE 1005 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1057)
.......+..|+|||...+..++.++|+||+|+++||+++ |+.||...... .... .. ....
T Consensus 160 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-~~~~------------~~-~~~~---- 221 (261)
T cd05034 160 AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR-EVLE------------QV-ERGY---- 221 (261)
T ss_pred hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHH------------HH-HcCC----
Confidence 1122234568999999988889999999999999999999 89998542111 0000 11 0000
Q ss_pred chhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHH
Q 001544 1006 DKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLK 1046 (1057)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1046 (1057)
..+.+..++.++.+++.+|+..+|++||+++|+.+.|+.
T Consensus 222 --~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 222 --RMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred --CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 011112346678999999999999999999999998875
No 207
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=8e-35 Score=317.35 Aligned_cols=251 Identities=28% Similarity=0.467 Sum_probs=195.3
Q ss_pred ceeccccCeEEEEEEec----CCcEEEEEEeecc-chhHHHHHHHHHHHHHhcCCCCceeEeeeec-cCCeeEEEEEEcc
Q 001544 775 NLIGRGSFGSVYIARLQ----NGIEVAVKTFDLQ-HERAFKSFDTECEVMKSIRHRNLTKIISSCS-NEDFKALILEYMR 848 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lV~E~~~ 848 (1057)
+.||+|+||.||+|... ++..||+|.+... .....+.+.+|+.+++.++||||+++++++. .++..++||||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999753 2467999998543 3345678889999999999999999999764 4566889999999
Q ss_pred CCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc--c
Q 001544 849 NGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS--M 926 (1057)
Q Consensus 849 ~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~ 926 (1057)
+|+|.+++.......++..+..++.|+++|++||| +.+++||||||+||++++++.+|++|||+++.+...... .
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 157 (262)
T cd05058 81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVH 157 (262)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccccccCCcceeec
Confidence 99999999876656788888999999999999999 899999999999999999999999999999765322111 1
Q ss_pred ccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCC-CCCCcccccccchhhhhhhccchhHHHhhhccccccc
Q 001544 927 TQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRR-KPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITE 1005 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1057)
......++..|+|||...+..++.++|||||||++|||++|+ +||...... ... ......
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~--~~~------------~~~~~~----- 218 (262)
T cd05058 158 NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF--DIT------------VYLLQG----- 218 (262)
T ss_pred ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HHH------------HHHhcC-----
Confidence 112334567899999998888999999999999999999965 455431110 000 000000
Q ss_pred chhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhH
Q 001544 1006 DKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIR 1048 (1057)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~ 1048 (1057)
.....+..++..+.+++.+||..+|++||++.|+++.++++.
T Consensus 219 -~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 219 -RRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred -CCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 011111234567899999999999999999999999999875
No 208
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=9.5e-35 Score=319.68 Aligned_cols=251 Identities=25% Similarity=0.363 Sum_probs=200.0
Q ss_pred CCCCCCceeccccCeEEEEEEe-cCCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
++|+..++||+|+||.||+|.. .+++.||+|++.... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 3577889999999999999975 478999999986542 33456788999999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 847 MRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
+++++|..+. .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~---- 148 (279)
T cd06619 81 MDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS---- 148 (279)
T ss_pred CCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc----
Confidence 9999997642 3678889999999999999999 999999999999999999999999999999765221
Q ss_pred ccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHH-hhhccccccc
Q 001544 927 TQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMK-IIDANLLITE 1005 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 1005 (1057)
......++..|+|||++.+..++.++||||+|+++|||++|+.||......+.... +..... ..+....
T Consensus 149 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~-------~~~~~~~~~~~~~~--- 218 (279)
T cd06619 149 IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLM-------PLQLLQCIVDEDPP--- 218 (279)
T ss_pred cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccc-------hHHHHHHHhccCCC---
Confidence 22334688899999999988899999999999999999999999875332211110 000001 0100000
Q ss_pred chhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 1006 DKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
.. .....++++.+++.+|++.+|++||++.|++++-
T Consensus 219 --~~-~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~ 254 (279)
T cd06619 219 --VL-PVGQFSEKFVHFITQCMRKQPKERPAPENLMDHP 254 (279)
T ss_pred --CC-CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCc
Confidence 00 0112456789999999999999999999999874
No 209
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7e-35 Score=323.23 Aligned_cols=250 Identities=26% Similarity=0.367 Sum_probs=205.3
Q ss_pred CCCCCCceeccccCeEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 769 NGFSENNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
.+|+..+.||.|+||.||+|.. .+++.||+|.+........+.+.+|++++++++|||++++++++.+++..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 4688889999999999999975 478999999997665555678899999999999999999999999999999999999
Q ss_pred cCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccc
Q 001544 848 RNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT 927 (1057)
Q Consensus 848 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 927 (1057)
++++|.+++... .+++.++..++.|++.|++||| +.+++||||||+||+++.++.+||+|||++........ .
T Consensus 99 ~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~--~ 171 (296)
T cd06655 99 AGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS--K 171 (296)
T ss_pred CCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccchhcccccc--c
Confidence 999999988654 4899999999999999999999 99999999999999999999999999999876532221 1
Q ss_pred cccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccch
Q 001544 928 QTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDK 1007 (1057)
Q Consensus 928 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1057)
.....++..|+|||.+.+..++.++|||||||++|||++|+.||......+. .. ..... ...
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~-~~------------~~~~~-----~~~ 233 (296)
T cd06655 172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LY------------LIATN-----GTP 233 (296)
T ss_pred CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HH------------HHHhc-----CCc
Confidence 2234578899999999888899999999999999999999999865322110 00 00000 000
Q ss_pred hhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1008 HFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
....+..+++.+.+++.+||..||++||++.+++++
T Consensus 234 ~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 234 ELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred ccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 111223456778999999999999999999999875
No 210
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2.2e-35 Score=331.65 Aligned_cols=237 Identities=29% Similarity=0.351 Sum_probs=188.4
Q ss_pred ceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHH-HHHhcCCCCceeEeeeeccCCeeEEEEEEccC
Q 001544 775 NLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECE-VMKSIRHRNLTKIISSCSNEDFKALILEYMRN 849 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 849 (1057)
+.||+|+||+||+|+.. +|+.||||++.... ......+.+|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999865 68999999996432 122334445544 56789999999999999999999999999999
Q ss_pred CChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccc
Q 001544 850 GSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQT 929 (1057)
Q Consensus 850 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 929 (1057)
|+|.+++.... .+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.... ......
T Consensus 81 g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~--~~~~~~ 154 (323)
T cd05575 81 GELFFHLQRER-SFPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIE--HSKTTS 154 (323)
T ss_pred CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCccccc--CCCccc
Confidence 99999887654 5889999999999999999999 99999999999999999999999999999875321 112233
Q ss_pred cccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhh
Q 001544 930 QTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHF 1009 (1057)
Q Consensus 930 ~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1057)
...||+.|+|||++.+..++.++||||+||++|||++|+.||..... ... ...+.....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-----~~~--------~~~i~~~~~-------- 213 (323)
T cd05575 155 TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT-----AEM--------YDNILNKPL-------- 213 (323)
T ss_pred cccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH-----HHH--------HHHHHcCCC--------
Confidence 45689999999999998999999999999999999999999865211 010 011111100
Q ss_pred HHHHHHHHHHHHHHhHcccCCCCCCCCHH
Q 001544 1010 AAKEQCASSVFNLAMECTVESPDERITAK 1038 (1057)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 1038 (1057)
......+.++.+++.+|++.||++||++.
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 214 RLKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 01123467789999999999999999885
No 211
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.5e-34 Score=322.74 Aligned_cols=264 Identities=21% Similarity=0.310 Sum_probs=204.1
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
++|++.+.||+|+||.||+|... ++..||+|.+.... .....++.+|++++++++||||+++++++.+++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 36888999999999999999754 68889999986542 33456788999999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCC-CCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 847 MRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYS-APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
+++++|.+++... ..+++..+..++.|+++||+||| + .+++||||||+||+++.++.+|++|||++......
T Consensus 81 ~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--- 153 (308)
T cd06615 81 MDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 153 (308)
T ss_pred cCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hhCCEEECCCChHHEEEecCCcEEEccCCCccccccc---
Confidence 9999999999765 35889999999999999999999 6 58999999999999999999999999998754221
Q ss_pred cccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccc---------------
Q 001544 926 MTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLP--------------- 990 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~--------------- 990 (1057)
......++..|+|||...+..++.++|+||||+++|||++|+.||..... .....+......
T Consensus 154 -~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (308)
T cd06615 154 -MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDA--KELEAMFGRPVSEGEAKESHRPVSGHP 230 (308)
T ss_pred -ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcch--hhHHHhhcCccccccccCCcccccCCC
Confidence 12234678899999998888899999999999999999999999864221 111111110000
Q ss_pred ------hhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 991 ------ISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 991 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
....+..+.... ......+ ...++.++.+++.+|+..+|++||++.|++++-
T Consensus 231 ~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 231 PDSPRPMAIFELLDYIVN-EPPPKLP-SGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred CCccchhhHHHHHHHHhc-CCCccCc-CcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 000011110000 0000000 012466799999999999999999999999884
No 212
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=4.9e-35 Score=323.21 Aligned_cols=266 Identities=24% Similarity=0.440 Sum_probs=209.1
Q ss_pred CCCCCceeccccCeEEEEEEec-----CCcEEEEEEeeccchh-HHHHHHHHHHHHHhcCCCCceeEeeeecc--CCeeE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-----NGIEVAVKTFDLQHER-AFKSFDTECEVMKSIRHRNLTKIISSCSN--EDFKA 841 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~ 841 (1057)
.|+..+.||+|+||.||+|+.. ++..||||+++..... ..+.+.+|++++++++||||+++++++.. ....+
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR 84 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence 5677799999999999999753 3789999999755443 56789999999999999999999999877 56789
Q ss_pred EEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccC
Q 001544 842 LILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIG 921 (1057)
Q Consensus 842 lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 921 (1057)
+||||+++++|.+++......+++.++..++.|++.||+||| +.+++||||||+||+++.++.++++|||.+.....
T Consensus 85 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05038 85 LIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAKVLPE 161 (284)
T ss_pred EEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEccccccccccc
Confidence 999999999999999877667999999999999999999999 89999999999999999999999999999987642
Q ss_pred CCCcc-ccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccc----hhHHHh
Q 001544 922 EDQSM-TQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLP----ISMMKI 996 (1057)
Q Consensus 922 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~ 996 (1057)
..... ......++..|+|||...+..++.++||||||+++|||++|+.|+......... +...... ....+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 238 (284)
T cd05038 162 DKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR---MIGIAQGQMIVTRLLEL 238 (284)
T ss_pred CCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcc---ccccccccccHHHHHHH
Confidence 22211 111223456799999998888999999999999999999999997653221111 0000000 001111
Q ss_pred hhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHh
Q 001544 997 IDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKI 1047 (1057)
Q Consensus 997 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 1047 (1057)
.... .+.+.+..++.++.+++.+||+.+|++||++.|++++|+++
T Consensus 239 ~~~~------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 239 LKEG------ERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHcC------CcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 1111 11122234567899999999999999999999999999876
No 213
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.9e-35 Score=329.42 Aligned_cols=259 Identities=27% Similarity=0.453 Sum_probs=205.5
Q ss_pred CCCCCCceeccccCeEEEEEEec--------CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCC
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ--------NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSI-RHRNLTKIISSCSNED 838 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 838 (1057)
.+|++.+.||+|+||.||+|... .+..||+|.++... ....+++.+|+++++++ +||||+++++++..++
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 36888999999999999999642 12469999886443 34467889999999999 7999999999999999
Q ss_pred eeEEEEEEccCCChhHHHhcCC---------------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC
Q 001544 839 FKALILEYMRNGSLEKCLYSGN---------------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD 903 (1057)
Q Consensus 839 ~~~lV~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~ 903 (1057)
..++||||+++|+|.+++.... ..+++.++..++.|+++|++||| +++++||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA---SQKCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEc
Confidence 9999999999999999986532 34788999999999999999999 99999999999999999
Q ss_pred CCCcEEEEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchh
Q 001544 904 DNMVAHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLK 982 (1057)
Q Consensus 904 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~ 982 (1057)
+++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||.... ..
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~~ 243 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP-----VE 243 (334)
T ss_pred CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC-----HH
Confidence 999999999999986533222222222334567999999988899999999999999999998 788875421 11
Q ss_pred hhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHHH
Q 001544 983 HWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRDF 1050 (1057)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 1050 (1057)
.+. ..+.... ....+..++.++.+++.+||+.+|++||++.|++++|+++...
T Consensus 244 ~~~---------~~~~~~~------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~ 296 (334)
T cd05100 244 ELF---------KLLKEGH------RMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV 296 (334)
T ss_pred HHH---------HHHHcCC------CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence 111 1111000 0111123466789999999999999999999999999998753
No 214
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7.8e-35 Score=323.18 Aligned_cols=251 Identities=26% Similarity=0.344 Sum_probs=205.7
Q ss_pred hCCCCCCceeccccCeEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
..+|++.+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 35788999999999999999985 47999999999765555567788999999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 847 MRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
+++++|.+++.+. .+++.++..++.|++.|++||| +.+++||||||+||+++.++.++|+|||.+....... .
T Consensus 98 ~~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~--~ 170 (297)
T cd06656 98 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--S 170 (297)
T ss_pred cCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc--c
Confidence 9999999998654 4788999999999999999999 8999999999999999999999999999987653222 1
Q ss_pred ccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccc
Q 001544 927 TQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITED 1006 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1057)
......+++.|+|||...+..++.++|+||+||++|++++|+.||............+.. ..
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~------------------~~ 232 (297)
T cd06656 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN------------------GT 232 (297)
T ss_pred CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccC------------------CC
Confidence 223346788999999998888999999999999999999999998652221110000000 00
Q ss_pred hhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1007 KHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.....+...+..+.+++.+||..+|++||++.|++++
T Consensus 233 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 233 PELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011123456678899999999999999999999985
No 215
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.3e-35 Score=336.73 Aligned_cols=253 Identities=22% Similarity=0.322 Sum_probs=198.9
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
++|+..+.||+|+||+||+|... +++.||||+++... ......+.+|++++.+++||+|+++++++.+++..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36888999999999999999865 68999999996432 334567888999999999999999999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
||+++|+|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~ 156 (360)
T cd05627 81 EFLPGGDMMTLLMKKD-TLSEEATQFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHR 156 (360)
T ss_pred eCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccc
Confidence 9999999999987654 4899999999999999999999 99999999999999999999999999999875422110
Q ss_pred c---------------------------------cccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCC
Q 001544 925 S---------------------------------MTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPT 971 (1057)
Q Consensus 925 ~---------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~ 971 (1057)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf 236 (360)
T cd05627 157 TEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (360)
T ss_pred cccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCC
Confidence 0 0011246899999999999999999999999999999999999998
Q ss_pred CcccccccchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCC---HHHHHHH
Q 001544 972 DEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERIT---AKEIVRR 1043 (1057)
Q Consensus 972 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps---~~evl~~ 1043 (1057)
......+. ...+..... ...++.....+.++.+++.+|+ .||++|++ +.|+++|
T Consensus 237 ~~~~~~~~-------------~~~i~~~~~----~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 237 CSETPQET-------------YRKVMNWKE----TLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCCCHHHH-------------HHHHHcCCC----ceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcC
Confidence 65221110 001111000 0001111124567888898876 49999984 6787776
No 216
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=6e-35 Score=325.15 Aligned_cols=268 Identities=22% Similarity=0.289 Sum_probs=202.2
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
++|+..+.||+|+||.||+|... +++.||+|.++... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 56888999999999999999865 68899999986443 23345677899999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 847 MRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
++ ++|.+++......+++..+..++.|+++||+||| +.+|+||||||+||++++++.+||+|||++...... ..
T Consensus 86 ~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~--~~ 159 (301)
T cd07873 86 LD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIP--TK 159 (301)
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCC--CC
Confidence 97 5899888776667899999999999999999999 999999999999999999999999999998754221 11
Q ss_pred ccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhh---hhhhccchhHHHhhhcccc
Q 001544 927 TQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKH---WVNDFLPISMMKIIDANLL 1002 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 1002 (1057)
......++..|+|||.+.+ ..++.++||||+||++|||++|+.||......+. ... ......+.......+....
T Consensus 160 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (301)
T cd07873 160 TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQ-LHFIFRILGTPTEETWPGILSNEEF 238 (301)
T ss_pred cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHcCCCChhhchhhhccccc
Confidence 2233456889999998765 4578899999999999999999999865321110 000 0000000001111100000
Q ss_pred c---cc----chhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1003 I---TE----DKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1003 ~---~~----~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
. .+ .........+++.+.+++.+|++.||.+|||+.|+++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 239 KSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred cccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0 00 00011112456788999999999999999999999984
No 217
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1e-34 Score=320.31 Aligned_cols=250 Identities=22% Similarity=0.332 Sum_probs=200.0
Q ss_pred CCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 771 FSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
|+..++||+|+||+||+|... +++.||+|.+.... ......+.+|++++++++|++|+++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 667789999999999999864 68999999986432 22345678899999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 847 MRNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
+++++|.+++.... ..+++..+..++.|++.||.||| +.+|+||||||+||++++++.+||+|||++......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~--- 155 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG--- 155 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC---
Confidence 99999998886543 46999999999999999999999 999999999999999999999999999998764221
Q ss_pred cccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccccccc
Q 001544 926 MTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITE 1005 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1057)
.......|+..|+|||++.+..++.++|+||+||++|||++|+.||....... ....+ .......
T Consensus 156 ~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~-~~~~~-------------~~~~~~~- 220 (285)
T cd05632 156 ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV-KREEV-------------DRRVLET- 220 (285)
T ss_pred CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH-HHHHH-------------HHhhhcc-
Confidence 12233468899999999988889999999999999999999999986521110 00100 0000000
Q ss_pred chhhHHHHHHHHHHHHHHhHcccCCCCCCCC-----HHHHHHH
Q 001544 1006 DKHFAAKEQCASSVFNLAMECTVESPDERIT-----AKEIVRR 1043 (1057)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~~ 1043 (1057)
.......++.++.+++.+|++.||++||+ +.|+++|
T Consensus 221 --~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 221 --EEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred --ccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 00111235667889999999999999999 7777776
No 218
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.4e-34 Score=317.14 Aligned_cols=238 Identities=23% Similarity=0.387 Sum_probs=189.5
Q ss_pred eeccccCeEEEEEEecC-------------------------CcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeE
Q 001544 776 LIGRGSFGSVYIARLQN-------------------------GIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKI 830 (1057)
Q Consensus 776 ~lg~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 830 (1057)
+||+|+||.||+|.... ...||+|++..........+.+|++++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999997421 24589999876555556778899999999999999999
Q ss_pred eeeeccCCeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC----
Q 001544 831 ISSCSNEDFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM---- 906 (1057)
Q Consensus 831 ~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~---- 906 (1057)
++++.+....++||||+++|+|+.++......+++..+..++.|+++||+||| +++|+||||||+||++++.+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~Nill~~~~~~~~ 158 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLE---DKNLVHGNVCAKNILLARLGLAEG 158 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---cCCccCCCCCcccEEEeccCcccC
Confidence 99999999999999999999999999776667899999999999999999999 99999999999999997643
Q ss_pred ---cEEEEcccccccccCCCCccccccccccccccCccccCC-CCCCccchHHHHHHHHHHHh-hCCCCCCcccccccch
Q 001544 907 ---VAHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETF-TRRKPTDEIFSGEMTL 981 (1057)
Q Consensus 907 ---~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~ell-tg~~p~~~~~~~~~~~ 981 (1057)
.+|++|||.+..... .....++..|+|||.+.+ ..++.++||||||+++||++ +|+.||......+.
T Consensus 159 ~~~~~kl~d~g~~~~~~~------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~-- 230 (274)
T cd05076 159 TSPFIKLSDPGVSFTALS------REERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK-- 230 (274)
T ss_pred ccceeeecCCcccccccc------ccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH--
Confidence 489999998864321 122346778999998765 56899999999999999995 68888865321110
Q ss_pred hhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 982 KHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
......... .++...+++.+++.+||+.+|++||++.++++.|
T Consensus 231 ------------~~~~~~~~~--------~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 231 ------------ERFYEKKHR--------LPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred ------------HHHHHhccC--------CCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 011110000 0011234688999999999999999999999887
No 219
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=7.3e-35 Score=316.49 Aligned_cols=251 Identities=27% Similarity=0.457 Sum_probs=202.7
Q ss_pred CCCCCCceeccccCeEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEcc
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMR 848 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 848 (1057)
.+|++.+.||+|+||.||+|.+.+++.+|+|.++.... ...++.+|++++++++|||++++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 46778899999999999999887788999998864322 23578899999999999999999999999999999999999
Q ss_pred CCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcccc
Q 001544 849 NGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQ 928 (1057)
Q Consensus 849 ~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 928 (1057)
+++|.+++......+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||.++...... ....
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~~~~ 158 (256)
T cd05112 83 HGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ-YTSS 158 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCcceeecccCc-cccc
Confidence 99999999876666899999999999999999999 8999999999999999999999999999987652211 1112
Q ss_pred ccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccccccch
Q 001544 929 TQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDK 1007 (1057)
Q Consensus 929 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1057)
....++.+|+|||...++.++.++||||+|+++|||++ |+.||...... ... +.+......
T Consensus 159 ~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-----~~~---------~~~~~~~~~---- 220 (256)
T cd05112 159 TGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS-----EVV---------ETINAGFRL---- 220 (256)
T ss_pred CCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH-----HHH---------HHHhCCCCC----
Confidence 22334578999999988889999999999999999998 89998652211 111 000000000
Q ss_pred hhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 1008 HFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
..+...+.++.+++.+||+.+|++||++.|++++|
T Consensus 221 --~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 221 --YKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred --CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 00112356789999999999999999999999987
No 220
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-35 Score=330.85 Aligned_cols=260 Identities=25% Similarity=0.404 Sum_probs=219.8
Q ss_pred CCCCceeccccCeEEEEEEe-cCC----cEEEEEEeecc-chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 771 FSENNLIGRGSFGSVYIARL-QNG----IEVAVKTFDLQ-HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~-~~~----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
.+..++||+|+||+||+|.+ ..| .+||+|++... ..++..++.+|+..|.+++|||+++++|+|.... ..||+
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt 776 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT 776 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence 34468999999999999974 333 57899998533 3455688999999999999999999999998766 78999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
+||+.|+|.++++..+..+-.+..+.|.+|||+|+.||| ++++|||||..+|||+.+-..+||.|||+++.....+.
T Consensus 777 q~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ 853 (1177)
T KOG1025|consen 777 QLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEK 853 (1177)
T ss_pred HhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhccCcccc
Confidence 999999999999998888999999999999999999999 99999999999999999999999999999998866655
Q ss_pred ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhccccc
Q 001544 925 SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLI 1003 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1057)
........-.+.|||-|.+....++.++|||||||++||++| |..|++.....+ +.+.+
T Consensus 854 ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e--------------I~dll------ 913 (1177)
T KOG1025|consen 854 EYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE--------------IPDLL------ 913 (1177)
T ss_pred cccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH--------------hhHHH------
Confidence 555555555678999999999999999999999999999999 888987632221 11222
Q ss_pred ccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHHHHhhh
Q 001544 1004 TEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRDFLLRN 1054 (1057)
Q Consensus 1004 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~~~ 1054 (1057)
+.+.+.++++-|+.++..++.+||..|++.||+++++...+.++.+.-.|.
T Consensus 914 e~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpqry 964 (1177)
T KOG1025|consen 914 EKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQRY 964 (1177)
T ss_pred hccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcceE
Confidence 223356677789999999999999999999999999999998887654443
No 221
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=6.2e-35 Score=325.09 Aligned_cols=258 Identities=23% Similarity=0.401 Sum_probs=204.4
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCc----EEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGI----EVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKAL 842 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 842 (1057)
++|+..+.||+|+||.||+|.+. +|. .||+|.+.... ......+.+|+.++++++||||+++++++... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 46778899999999999999753 444 57889886543 23345788999999999999999999998654 4679
Q ss_pred EEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCC
Q 001544 843 ILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 922 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 922 (1057)
|+||+++|+|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 86 v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~ 162 (303)
T cd05110 86 VTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 162 (303)
T ss_pred eehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHh---hcCeeccccccceeeecCCCceEEccccccccccCc
Confidence 99999999999999876667899999999999999999999 999999999999999999999999999999876433
Q ss_pred CCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhccc
Q 001544 923 DQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANL 1001 (1057)
Q Consensus 923 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1057)
..........++..|+|||...+..++.++||||||+++||+++ |+.||...... ....+ .....
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~--~~~~~------------~~~~~ 228 (303)
T cd05110 163 EKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR--EIPDL------------LEKGE 228 (303)
T ss_pred ccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHH------------HHCCC
Confidence 22222223345678999999988889999999999999999998 88888652111 11111 11100
Q ss_pred ccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHHH
Q 001544 1002 LITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRDF 1050 (1057)
Q Consensus 1002 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 1050 (1057)
..+.+..++..+.+++.+||..+|++||++.|+++.++++.+.
T Consensus 229 ------~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 229 ------RLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0111123456788999999999999999999999999988654
No 222
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=2.3e-34 Score=316.34 Aligned_cols=247 Identities=28% Similarity=0.417 Sum_probs=203.9
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
.|+..+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++.++...++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4677789999999999999865 58899999987543 445678899999999999999999999999999999999999
Q ss_pred cCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccc
Q 001544 848 RNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT 927 (1057)
Q Consensus 848 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 927 (1057)
++|+|.+++... .+++.++..++.|++.|++|+| +.+++|+||+|+||+++.++.++++|||++....... ..
T Consensus 85 ~~~~L~~~i~~~--~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~--~~ 157 (277)
T cd06640 85 GGGSALDLLRAG--PFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--IK 157 (277)
T ss_pred CCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc--cc
Confidence 999999988754 4888999999999999999999 9999999999999999999999999999997653222 12
Q ss_pred cccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccch
Q 001544 928 QTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDK 1007 (1057)
Q Consensus 928 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1057)
.....++..|+|||+..+..++.++|+|||||++|||++|..||......+. ....... .
T Consensus 158 ~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--------------~~~~~~~------~ 217 (277)
T cd06640 158 RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV--------------LFLIPKN------N 217 (277)
T ss_pred cccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH--------------hhhhhcC------C
Confidence 2234578889999999888899999999999999999999999865321110 0000000 0
Q ss_pred hhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1008 HFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.......++..+.+++.+||+.+|++||++.|++++
T Consensus 218 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 218 PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 111223467788999999999999999999999888
No 223
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=4.7e-35 Score=321.10 Aligned_cols=252 Identities=23% Similarity=0.336 Sum_probs=198.7
Q ss_pred HhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhc-CCCCceeEeeeecc------CC
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSI-RHRNLTKIISSCSN------ED 838 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~------~~ 838 (1057)
+.+.|+..+.||+|+||.||+|... +++.||+|++..... ....+..|+++++++ +||||+++++++.. ..
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 82 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc-cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence 4567888899999999999999865 688999999865432 335778899999998 69999999999864 24
Q ss_pred eeEEEEEEccCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccc
Q 001544 839 FKALILEYMRNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAK 917 (1057)
Q Consensus 839 ~~~lV~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~ 917 (1057)
..++||||+++++|.+++.... ..+++..+..++.|++.|++||| +++|+||||||+||++++++.++|+|||+++
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~ 159 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSA 159 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEccCCCce
Confidence 6889999999999999987643 46899999999999999999999 8999999999999999999999999999987
Q ss_pred cccCCCCccccccccccccccCccccC-----CCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchh
Q 001544 918 LLIGEDQSMTQTQTLATLGYMAPEYGR-----EGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPIS 992 (1057)
Q Consensus 918 ~~~~~~~~~~~~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 992 (1057)
..... ........|+..|+|||++. +..++.++||||+||++|||++|+.||....... .+.
T Consensus 160 ~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~----~~~------- 226 (272)
T cd06637 160 QLDRT--VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR----ALF------- 226 (272)
T ss_pred ecccc--cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHH----HHH-------
Confidence 65221 12223456888999999875 3457889999999999999999999986522110 000
Q ss_pred HHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 993 MMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
...... ........++.++.+++.+||..+|.+|||+.|+++|
T Consensus 227 --~~~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 227 --LIPRNP------APRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred --HHhcCC------CCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 000000 0000112345678999999999999999999999875
No 224
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=4.6e-35 Score=328.70 Aligned_cols=247 Identities=23% Similarity=0.316 Sum_probs=196.3
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcC-CCCceeEeeeeccCCeeEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIR-HRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~ 844 (1057)
+|+..+.||+|+||+||+|... +|+.||||+++... ....+.+..|.++++.+. |++|+++++++.+.+..|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3677899999999999999855 68999999986432 233456778888988885 678888999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
||+++|+|.+++.... .+++.++..++.|++.||+||| +++|+||||||+||++++++.+||+|||+++......
T Consensus 81 Ey~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~- 155 (323)
T cd05615 81 EYVNGGDLMYHIQQVG-KFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG- 155 (323)
T ss_pred cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeccccccccCCCC-
Confidence 9999999999887654 4899999999999999999999 9999999999999999999999999999987532211
Q ss_pred ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccc
Q 001544 925 SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLIT 1004 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1057)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||....... . ...+.....
T Consensus 156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~--~-----------~~~i~~~~~--- 218 (323)
T cd05615 156 -VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE--L-----------FQSIMEHNV--- 218 (323)
T ss_pred -ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH--H-----------HHHHHhCCC---
Confidence 12233458999999999988889999999999999999999999987521110 0 011111100
Q ss_pred cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCH-----HHHHHH
Q 001544 1005 EDKHFAAKEQCASSVFNLAMECTVESPDERITA-----KEIVRR 1043 (1057)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~evl~~ 1043 (1057)
..+..++.++.+++.+|++.+|.+|++. .++.+|
T Consensus 219 -----~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05615 219 -----SYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREH 257 (323)
T ss_pred -----CCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcC
Confidence 1112346678899999999999999974 455544
No 225
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.1e-34 Score=315.12 Aligned_cols=249 Identities=28% Similarity=0.434 Sum_probs=198.2
Q ss_pred ceeccccCeEEEEEEecC----CcEEEEEEeeccch-hHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccC
Q 001544 775 NLIGRGSFGSVYIARLQN----GIEVAVKTFDLQHE-RAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRN 849 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 849 (1057)
+.||+|+||.||+|.+.. +..||+|.+..... ...+++.+|+++++++.||||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 469999999999997532 36899999865443 34577899999999999999999999876 4567999999999
Q ss_pred CChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccc-c
Q 001544 850 GSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT-Q 928 (1057)
Q Consensus 850 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~-~ 928 (1057)
|+|.+++.... .+++..+..++.|++.|++||| +.+++||||||+||+++.++.+|++|||.++.......... .
T Consensus 80 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~ 155 (257)
T cd05060 80 GPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRAT 155 (257)
T ss_pred CcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccc
Confidence 99999998765 5899999999999999999999 89999999999999999999999999999987643222111 1
Q ss_pred ccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccccccch
Q 001544 929 TQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDK 1007 (1057)
Q Consensus 929 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1057)
....++..|+|||......++.++||||||+++|||++ |+.||...... ....++ ....
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~--~~~~~~------------~~~~------ 215 (257)
T cd05060 156 TAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA--EVIAML------------ESGE------ 215 (257)
T ss_pred cCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHH------------HcCC------
Confidence 11223467999999988889999999999999999998 99998653211 111111 1100
Q ss_pred hhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhH
Q 001544 1008 HFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIR 1048 (1057)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~ 1048 (1057)
....+..++..+.+++.+|+..+|++||++.++++.|+++.
T Consensus 216 ~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 216 RLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 01112345678899999999999999999999999998764
No 226
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.6e-35 Score=336.14 Aligned_cols=267 Identities=21% Similarity=0.219 Sum_probs=200.8
Q ss_pred hCCCCCCceeccccCeEEEEEEec---CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ---NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
..+|++.+.||+|+||.||+|... .+..||||.+... ....+|++++++++||||+++++++......++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 347899999999999999999743 4678999988543 23467999999999999999999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
||+. ++|.+++.. ...+++.+++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 166 e~~~-~~l~~~l~~-~~~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~ 240 (392)
T PHA03207 166 PKYK-CDLFTYVDR-SGPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD 240 (392)
T ss_pred hhcC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccCccccccCcccc
Confidence 9996 588888843 346899999999999999999999 99999999999999999999999999999986643333
Q ss_pred ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccc--cchhhhhhhcc------ch----h
Q 001544 925 SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGE--MTLKHWVNDFL------PI----S 992 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~--~~~~~~~~~~~------~~----~ 992 (1057)
........||+.|+|||++.+..++.++||||+||++|||++|+.||....... ..+........ +. .
T Consensus 241 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~ 320 (392)
T PHA03207 241 TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTN 320 (392)
T ss_pred cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchh
Confidence 333334578999999999998899999999999999999999999986532211 00111000000 00 0
Q ss_pred HHHhhhcccc-cccchh---hHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 993 MMKIIDANLL-ITEDKH---FAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 993 ~~~~~~~~~~-~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
..+.+..... ...... ......++.++.+++.+|+..||++||++.|+++|=
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p 376 (392)
T PHA03207 321 LCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLP 376 (392)
T ss_pred HHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 0000000000 000000 000112356788999999999999999999999873
No 227
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2e-34 Score=315.43 Aligned_cols=252 Identities=23% Similarity=0.355 Sum_probs=191.2
Q ss_pred ceeccccCeEEEEEEecC---CcEEEEEEeeccch-hHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCC
Q 001544 775 NLIGRGSFGSVYIARLQN---GIEVAVKTFDLQHE-RAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNG 850 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~g 850 (1057)
+.||+|+||.||+|...+ +..+|+|.++.... .....+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 358999999999997643 46799998865432 33457888999999999999999999999999999999999999
Q ss_pred ChhHHHhcCC----ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 851 SLEKCLYSGN----YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 851 sL~~~l~~~~----~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
+|.+++.... ...++..+..++.|++.|++||| +.+++||||||+||+++.++.+|++|||.++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 9999987533 34677788899999999999999 9999999999999999999999999999987543222222
Q ss_pred ccccccccccccCccccCCC-------CCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhh
Q 001544 927 TQTQTLATLGYMAPEYGREG-------RVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIID 998 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~~-------~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1057)
......++..|+|||++... .++.++|+||||+++|||++ |+.||......+.. .+ .+.
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~--~~-----------~~~ 224 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVL--TY-----------TVR 224 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHH--HH-----------Hhh
Confidence 22334567889999987532 35789999999999999996 99998653221110 00 000
Q ss_pred cccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHH
Q 001544 999 ANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLL 1045 (1057)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1045 (1057)
....... ........+..+.+++..|| .+|++|||+.|+++.|+
T Consensus 225 ~~~~~~~--~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 225 EQQLKLP--KPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred cccCCCC--CCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 0000000 00001123556888999999 68999999999998764
No 228
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.4e-34 Score=328.45 Aligned_cols=268 Identities=22% Similarity=0.254 Sum_probs=198.7
Q ss_pred HHHHhCCCCCCceeccccCeEEEEEEe-cCCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccC---
Q 001544 764 LFQATNGFSENNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNE--- 837 (1057)
Q Consensus 764 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--- 837 (1057)
.....++|++.+.||+|+||+||+|.. .+++.||||++.... ......+.+|++++++++||||+++++++...
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07878 10 VWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSI 89 (343)
T ss_pred HhhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccc
Confidence 344567899999999999999999975 468899999986432 22345677899999999999999999987533
Q ss_pred ---CeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccc
Q 001544 838 ---DFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFG 914 (1057)
Q Consensus 838 ---~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 914 (1057)
...|+++|++ +++|.+++... .+++..+..++.|+++||+||| +.+|+||||||+||++++++.+||+|||
T Consensus 90 ~~~~~~~~~~~~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg 163 (343)
T cd07878 90 ENFNEVYLVTNLM-GADLNNIVKCQ--KLSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFG 163 (343)
T ss_pred cccCcEEEEeecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEcCCc
Confidence 4568999988 77998877643 4899999999999999999999 9999999999999999999999999999
Q ss_pred ccccccCCCCccccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhcc--ch
Q 001544 915 IAKLLIGEDQSMTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFL--PI 991 (1057)
Q Consensus 915 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~--~~ 991 (1057)
+++.... ......+|..|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+..... ..
T Consensus 164 ~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~ 237 (343)
T cd07878 164 LARQADD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI-DQLKRIMEVVGTPSP 237 (343)
T ss_pred cceecCC-----CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHhCCCCH
Confidence 9986532 1233468899999998876 56889999999999999999999998652211 11111111000 00
Q ss_pred hHH---------HhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 992 SMM---------KIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 992 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
... ......................+.+.+++.+|++.||++|||+.|+++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 238 EVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 0000000000000000011234568899999999999999999999987
No 229
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.2e-34 Score=319.66 Aligned_cols=250 Identities=23% Similarity=0.365 Sum_probs=200.6
Q ss_pred CCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 771 FSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
|+..++||+|+||.||+|... +++.||||.+.... ......+.+|+.++++++|++++.+++.+.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 667789999999999999765 68999999986432 22335677899999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 847 MRNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
+++++|.+++.... ..+++.++..++.|++.|++||| +.+|+||||||+||++++++.++++|||++.......
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 156 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-- 156 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc--
Confidence 99999999886533 45899999999999999999999 9999999999999999999999999999987642211
Q ss_pred cccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccccccc
Q 001544 926 MTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITE 1005 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1057)
......|+..|+|||++.+..++.++||||+||++|||++|+.||....... .... .....+..
T Consensus 157 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~-~~~~---------~~~~~~~~----- 220 (285)
T cd05630 157 -TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREE---------VERLVKEV----- 220 (285)
T ss_pred -cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc-hHHH---------HHhhhhhh-----
Confidence 2223468999999999998899999999999999999999999987532110 0000 00000000
Q ss_pred chhhHHHHHHHHHHHHHHhHcccCCCCCCCC-----HHHHHHH
Q 001544 1006 DKHFAAKEQCASSVFNLAMECTVESPDERIT-----AKEIVRR 1043 (1057)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~~ 1043 (1057)
.......+++++.+++.+||+.||++||| +.|+++|
T Consensus 221 --~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 221 --QEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred --hhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 00111235667899999999999999999 8899885
No 230
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.5e-34 Score=316.65 Aligned_cols=248 Identities=27% Similarity=0.468 Sum_probs=195.8
Q ss_pred ceeccccCeEEEEEEec-CCc--EEEEEEeeccc-hhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCCeeEEEEEEccC
Q 001544 775 NLIGRGSFGSVYIARLQ-NGI--EVAVKTFDLQH-ERAFKSFDTECEVMKSI-RHRNLTKIISSCSNEDFKALILEYMRN 849 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~~~~ 849 (1057)
++||+|+||.||+|..+ ++. .+|+|.++... ....+.+.+|+++++++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 36899999999999875 343 57888886432 34456888999999999 799999999999999999999999999
Q ss_pred CChhHHHhcCC---------------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccc
Q 001544 850 GSLEKCLYSGN---------------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFG 914 (1057)
Q Consensus 850 gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 914 (1057)
|+|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+||++++++.+|++|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccccceEEEcCCCeEEECCCC
Confidence 99999987532 24789999999999999999999 8999999999999999999999999999
Q ss_pred ccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhH
Q 001544 915 IAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISM 993 (1057)
Q Consensus 915 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 993 (1057)
++.... ..........+..|+|||+.....++.++|||||||++|||++ |+.||...... . .
T Consensus 158 l~~~~~---~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-----~---------~ 220 (270)
T cd05047 158 LSRGQE---VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----E---------L 220 (270)
T ss_pred Cccccc---hhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH-----H---------H
Confidence 986321 1111112233567999999988889999999999999999997 99998542111 0 0
Q ss_pred HHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhH
Q 001544 994 MKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIR 1048 (1057)
Q Consensus 994 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~ 1048 (1057)
...+.... ....+..++.++.+++.+||+.+|.+||++.|+++.|+++.
T Consensus 221 ~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 221 YEKLPQGY------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred HHHHhCCC------CCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 11111100 00111234567889999999999999999999999998763
No 231
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=9.3e-35 Score=327.77 Aligned_cols=255 Identities=20% Similarity=0.276 Sum_probs=200.0
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
++|++.++||+|+||+||++..+ +++.||+|++.... ......+.+|+.++..++|++|+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 46888999999999999999865 57889999985421 223455788999999999999999999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
||+++|+|.+++.+....+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~- 156 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG- 156 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEeecchheecccCC-
Confidence 999999999999876667899999999999999999999 9999999999999999999999999999987543221
Q ss_pred ccccccccccccccCccccC-----CCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhc
Q 001544 925 SMTQTQTLATLGYMAPEYGR-----EGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDA 999 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1057)
........||+.|+|||++. ...++.++|||||||++|||++|+.||...... .. ...+...
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~-----~~--------~~~i~~~ 223 (332)
T cd05623 157 TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLV-----ET--------YGKIMNH 223 (332)
T ss_pred cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHH-----HH--------HHHHhCC
Confidence 22223356899999999875 345788999999999999999999998652111 00 0111110
Q ss_pred ccccccchhhHHHHHHHHHHHHHHhHcccCCCCC--CCCHHHHHHH
Q 001544 1000 NLLITEDKHFAAKEQCASSVFNLAMECTVESPDE--RITAKEIVRR 1043 (1057)
Q Consensus 1000 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~~ 1043 (1057)
.... ........++.++.+++.+|+..+|++ |+++.|+++|
T Consensus 224 ~~~~---~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 224 KERF---QFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred Cccc---cCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 0000 001111345678899999988665554 7899999988
No 232
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-35 Score=311.08 Aligned_cols=247 Identities=25% Similarity=0.366 Sum_probs=209.2
Q ss_pred CCCCCceeccccCeEEEEEE-ecCCcEEEEEEeecc--chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIAR-LQNGIEVAVKTFDLQ--HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
-|...+.||+|.|++|-.|+ .-+|..||||++.+. ++.....+.+|++.|+-++|||||++|+....+...|+|.|.
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL 98 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL 98 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence 46677889999999999996 447999999999654 344567788899999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeee-CCCCcEEEEcccccccccCCCCc
Q 001544 847 MRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL-DDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill-~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
-++|+|.+++.+.+.-+.+.-+.+++.||+.|+.|+| ...|||||+||+||.+ .+-|-+|+.|||++-.+.+ .
T Consensus 99 GD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P---G 172 (864)
T KOG4717|consen 99 GDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP---G 172 (864)
T ss_pred cCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEeeeccccccCCC---c
Confidence 9999999999988888999999999999999999999 8999999999999765 5679999999999977643 3
Q ss_pred cccccccccccccCccccCCCCCC-ccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccc
Q 001544 926 MTQTQTLATLGYMAPEYGREGRVS-TKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLIT 1004 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~~~~~-~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1057)
......+|+..|-|||++.+..|+ +++||||+||++|-+++|++||....+.+. +..++|-
T Consensus 173 ~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET-------------LTmImDC----- 234 (864)
T KOG4717|consen 173 KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET-------------LTMIMDC----- 234 (864)
T ss_pred chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh-------------hhhhhcc-----
Confidence 344556799999999999988876 678999999999999999999987433321 1222221
Q ss_pred cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1005 EDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.+..+..++.++.++|..|+..||++|.+.+|++.+
T Consensus 235 ---KYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 235 ---KYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred ---cccCchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 223445678899999999999999999999998754
No 233
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.7e-34 Score=314.28 Aligned_cols=253 Identities=27% Similarity=0.455 Sum_probs=203.8
Q ss_pred hCCCCCCceeccccCeEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
.++|+..+.||+|+||.||+|...++..||+|.+... ....+.+.+|++++++++|+||+++++++.+ ...++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 3578889999999999999999877888999988643 3345678899999999999999999999887 7789999999
Q ss_pred cCCChhHHHhcC-CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 848 RNGSLEKCLYSG-NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 848 ~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
++++|.+++... ....++.++..++.|++.|++||| +.+++||||||+||+++.++.+|++|||.+...... ...
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~-~~~ 158 (260)
T cd05073 83 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN-EYT 158 (260)
T ss_pred CCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcceeeccCC-Ccc
Confidence 999999998764 345888999999999999999999 899999999999999999999999999999765321 111
Q ss_pred ccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhccccccc
Q 001544 927 TQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITE 1005 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1057)
......++..|+|||++....++.++|+|||||++||+++ |+.||...... ....+ +....
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~------------~~~~~---- 220 (260)
T cd05073 159 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRA------------LERGY---- 220 (260)
T ss_pred cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH--HHHHH------------HhCCC----
Confidence 2222345567999999988889999999999999999999 88888652111 11111 11100
Q ss_pred chhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHH
Q 001544 1006 DKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLK 1046 (1057)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1046 (1057)
..+.....+.++.+++.+|++.+|++||++.++.+.|+.
T Consensus 221 --~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 221 --RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred --CCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 001112345678999999999999999999999999875
No 234
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=3.6e-35 Score=330.20 Aligned_cols=240 Identities=28% Similarity=0.326 Sum_probs=188.8
Q ss_pred ceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHH-HHHHhcCCCCceeEeeeeccCCeeEEEEEEccC
Q 001544 775 NLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTEC-EVMKSIRHRNLTKIISSCSNEDFKALILEYMRN 849 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~-~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 849 (1057)
+.||+|+||+||+|+.. +++.||+|++.... ......+..|. .+++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999865 57889999986432 12223344444 456788999999999999999999999999999
Q ss_pred CChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccc
Q 001544 850 GSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQT 929 (1057)
Q Consensus 850 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 929 (1057)
|+|.+++.... .+++.++..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++..... .....
T Consensus 81 ~~L~~~~~~~~-~~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~--~~~~~ 154 (325)
T cd05602 81 GELFYHLQRER-CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH--NGTTS 154 (325)
T ss_pred CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCCCcccccC--CCCcc
Confidence 99999887654 4778888899999999999999 999999999999999999999999999998754221 12233
Q ss_pred cccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhh
Q 001544 930 QTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHF 1009 (1057)
Q Consensus 930 ~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1057)
...||+.|+|||++.+..++.++||||+||++|||++|+.||......+ .. ..+.....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-----~~--------~~i~~~~~-------- 213 (325)
T cd05602 155 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-----MY--------DNILNKPL-------- 213 (325)
T ss_pred cccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH-----HH--------HHHHhCCc--------
Confidence 4568999999999999899999999999999999999999986521110 00 01111000
Q ss_pred HHHHHHHHHHHHHHhHcccCCCCCCCCHHHHH
Q 001544 1010 AAKEQCASSVFNLAMECTVESPDERITAKEIV 1041 (1057)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl 1041 (1057)
.....++..+.+++.+|++.||.+||++.+.+
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 214 QLKPNITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 11123567789999999999999999887443
No 235
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-35 Score=294.90 Aligned_cols=272 Identities=21% Similarity=0.308 Sum_probs=215.1
Q ss_pred CHHHHHHHhCCCCCCceeccccCeEEEEEE-ecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcC-CCCceeEeeeeccC
Q 001544 760 SYLELFQATNGFSENNLIGRGSFGSVYIAR-LQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIR-HRNLTKIISSCSNE 837 (1057)
Q Consensus 760 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~ 837 (1057)
.+.|+++.++ ++||+|+|++|.-+. +.+|.+||||++.+.......++.+|++++.+.+ |+||++++++|+++
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 3567777664 789999999999886 7789999999998887788899999999999995 99999999999999
Q ss_pred CeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC---cEEEEccc
Q 001544 838 DFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM---VAHLSDFG 914 (1057)
Q Consensus 838 ~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~---~~kl~Dfg 914 (1057)
+..|+|||-|.||+|..++++.. .+++.++.++.++||.||.||| .+||.|||+||+|||-.... -+|||||.
T Consensus 149 ~~FYLVfEKm~GGplLshI~~~~-~F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPvKiCDfD 224 (463)
T KOG0607|consen 149 TRFYLVFEKMRGGPLLSHIQKRK-HFNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCESPNKVSPVKICDFD 224 (463)
T ss_pred ceEEEEEecccCchHHHHHHHhh-hccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeecCCCCcCceeeeccc
Confidence 99999999999999999998766 4899999999999999999999 99999999999999997544 58999999
Q ss_pred ccccccCCC-----CccccccccccccccCccccC-----CCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhh
Q 001544 915 IAKLLIGED-----QSMTQTQTLATLGYMAPEYGR-----EGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHW 984 (1057)
Q Consensus 915 ~a~~~~~~~-----~~~~~~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~ 984 (1057)
+..-+.-.. .......++|+..|||||+.. ...|+.+.|.||+|||+|-|++|.+||.+....+-.|.
T Consensus 225 LgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWd-- 302 (463)
T KOG0607|consen 225 LGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWD-- 302 (463)
T ss_pred cccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCcc--
Confidence 875432111 112223456778899999642 23578899999999999999999999987655433221
Q ss_pred hhhcc-chhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 985 VNDFL-PISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 985 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.... +.-..+.++........-....+..++.+..+++...+..||.+|.++.++++|
T Consensus 303 -rGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnh 361 (463)
T KOG0607|consen 303 -RGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH 361 (463)
T ss_pred -CCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence 1111 111223333222222222334566788999999999999999999999999874
No 236
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.7e-34 Score=315.27 Aligned_cols=252 Identities=24% Similarity=0.387 Sum_probs=202.4
Q ss_pred CCCCCceeccccCeEEEEEEecCCcEEEEEEeeccc------hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQH------ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALI 843 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 843 (1057)
+|+..+.||+|+||+||+|...+++.+|||.++... ......+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 477889999999999999988889999999886432 23346788999999999999999999999999999999
Q ss_pred EEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC
Q 001544 844 LEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 923 (1057)
|||+++++|.+++.+.. .+++..+..++.|++.|++||| +.+|+|+||+|+||++++++.++++|||.+.......
T Consensus 81 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 156 (265)
T cd06631 81 MEFVPGGSISSILNRFG-PLPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVG 156 (265)
T ss_pred EecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcc
Confidence 99999999999987654 4789999999999999999999 8999999999999999999999999999987642211
Q ss_pred C----ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhc
Q 001544 924 Q----SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDA 999 (1057)
Q Consensus 924 ~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1057)
. ........++..|+|||+..+..++.++||||+|+++|||++|+.||......+ .. ......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~----~~---------~~~~~~ 223 (265)
T cd06631 157 LHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA----AM---------FYIGAH 223 (265)
T ss_pred ccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH----HH---------HHhhhc
Confidence 1 111223457889999999988889999999999999999999999986521110 00 000000
Q ss_pred ccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1000 NLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1000 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
... ....+..++.++.+++.+||+.+|++||++.|++++
T Consensus 224 ~~~-----~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 224 RGL-----MPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred cCC-----CCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000 001112356778999999999999999999999864
No 237
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=9.5e-35 Score=327.34 Aligned_cols=255 Identities=20% Similarity=0.273 Sum_probs=199.9
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc---chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ---HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
++|++.+.||+|+||+||+|+.. +++.||+|++... .......+.+|+.++..++|++|+++++++.+++..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47889999999999999999865 6889999998642 2233456788999999999999999999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
||+++|+|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++......
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~- 156 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG- 156 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC-
Confidence 999999999999876567899999999999999999999 9999999999999999999999999999997653222
Q ss_pred ccccccccccccccCccccCC-----CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhc
Q 001544 925 SMTQTQTLATLGYMAPEYGRE-----GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDA 999 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1057)
........|+++|+|||++.+ +.++.++||||+||++|||++|+.||......+ . ...+...
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~----~---------~~~i~~~ 223 (331)
T cd05624 157 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE----T---------YGKIMNH 223 (331)
T ss_pred ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHH----H---------HHHHHcC
Confidence 122233568999999998765 467889999999999999999999986421110 0 0111110
Q ss_pred ccccccchhhHHHHHHHHHHHHHHhHcccCCCCC--CCCHHHHHHH
Q 001544 1000 NLLITEDKHFAAKEQCASSVFNLAMECTVESPDE--RITAKEIVRR 1043 (1057)
Q Consensus 1000 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~~ 1043 (1057)
..... .......++.++.+++.+|+..++++ |+++.++++|
T Consensus 224 ~~~~~---~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 224 EERFQ---FPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred CCccc---CCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 00000 00111234677889999999876654 5688988876
No 238
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.3e-34 Score=317.98 Aligned_cols=268 Identities=24% Similarity=0.298 Sum_probs=199.4
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
+|++.+.||+|++|.||+|+.. +++.||||+++... ......+.+|++++++++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4778899999999999999865 68999999986432 22346788899999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCC--ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 847 MRNGSLEKCLYSGN--YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
++ ++|.+++.... ..+++.++..++.|+++||+||| +.+++||||||+||+++.++.+||+|||++......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 154 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP-- 154 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECcccceeecCCC--
Confidence 97 58888876533 56899999999999999999999 999999999999999999999999999998754221
Q ss_pred ccccccccccccccCccccCCC-CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhh--hhhhccchh-----HHHh
Q 001544 925 SMTQTQTLATLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKH--WVNDFLPIS-----MMKI 996 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~--~~~~~~~~~-----~~~~ 996 (1057)
........+++.|+|||.+.+. .++.++||||+||++|||++|+.||......+..... ......... ....
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (285)
T cd07861 155 VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPD 234 (285)
T ss_pred cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHH
Confidence 1222334568899999987654 4788999999999999999999998753221110000 000000000 0000
Q ss_pred hhccccc-ccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 997 IDANLLI-TEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 997 ~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
....... ...........+++++.+++.+||..||++|||+.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 235 YKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred HHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0000000 0000001112356788999999999999999999999875
No 239
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.2e-34 Score=317.25 Aligned_cols=249 Identities=30% Similarity=0.516 Sum_probs=198.5
Q ss_pred ceeccccCeEEEEEEecC-------CcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 775 NLIGRGSFGSVYIARLQN-------GIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
+.||+|+||.||+|+..+ ++.||||.+.... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999997542 2579999885433 34467889999999999999999999999999999999999
Q ss_pred ccCCChhHHHhcC------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC-----cEEEEcccc
Q 001544 847 MRNGSLEKCLYSG------NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM-----VAHLSDFGI 915 (1057)
Q Consensus 847 ~~~gsL~~~l~~~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~-----~~kl~Dfg~ 915 (1057)
+++++|.+++... ...+++.++..++.|++.|++||| +.+++|+||||+||+++.++ .++++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 9999999998652 234788999999999999999999 89999999999999999877 899999999
Q ss_pred cccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHH
Q 001544 916 AKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMM 994 (1057)
Q Consensus 916 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1057)
++...............++..|+|||++.++.++.++|||||||++|||++ |+.||......+ . .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~--~------------~ 223 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE--V------------L 223 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH--H------------H
Confidence 976543322222223345678999999999999999999999999999998 999986421110 0 1
Q ss_pred HhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHH
Q 001544 995 KIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLK 1046 (1057)
Q Consensus 995 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1046 (1057)
..+... .....+..++..+.+++.+||..+|++||++.++++.|++
T Consensus 224 ~~~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 224 QHVTAG------GRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred HHHhcC------CccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 111110 0111123456788999999999999999999999998863
No 240
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-36 Score=324.14 Aligned_cols=250 Identities=24% Similarity=0.384 Sum_probs=208.4
Q ss_pred CCCCceeccccCeEEEEEEecC-CcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccC
Q 001544 771 FSENNLIGRGSFGSVYIARLQN-GIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRN 849 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 849 (1057)
|.+...||.|+||.||+|..++ +-..|.|++........++|.-|+++++.+.||+||++++.|..+...++..|||.|
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G 113 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG 113 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence 5566789999999999998663 556788999888888889999999999999999999999999999999999999999
Q ss_pred CChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccc
Q 001544 850 GSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQT 929 (1057)
Q Consensus 850 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 929 (1057)
|-.+..+-.-+..+.+.++.-+++|++.||.||| +..|||||+|+.|||++-+|.++++|||.+... ........
T Consensus 114 GAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn--~~t~qkRD 188 (1187)
T KOG0579|consen 114 GAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKN--KSTRQKRD 188 (1187)
T ss_pred chHhHHHHHhccccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceEEEecCcEeeecccccccc--hhHHhhhc
Confidence 9999998887788999999999999999999999 999999999999999999999999999998643 12233445
Q ss_pred cccccccccCcccc-----CCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccc
Q 001544 930 QTLATLGYMAPEYG-----REGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLIT 1004 (1057)
Q Consensus 930 ~~~~t~~y~aPE~~-----~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1057)
..+||+.|||||+. ....|++++||||||+++.||..+.+|..+...-.. +.++ ...
T Consensus 189 sFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRV-------------llKi-----aKS 250 (1187)
T KOG0579|consen 189 SFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV-------------LLKI-----AKS 250 (1187)
T ss_pred cccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHH-------------HHHH-----hhc
Confidence 56899999999964 467899999999999999999999999655211000 0111 111
Q ss_pred cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1005 EDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
..+....+...+..|.+++.+|+..+|+.||+++++++|
T Consensus 251 ePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 251 EPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred CCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 112223345667889999999999999999999999986
No 241
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=9.9e-35 Score=331.11 Aligned_cols=267 Identities=21% Similarity=0.245 Sum_probs=198.2
Q ss_pred HHhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc--chhHHHHHHHHHHHHHhcCCCCceeEeeeeccC-----
Q 001544 766 QATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ--HERAFKSFDTECEVMKSIRHRNLTKIISSCSNE----- 837 (1057)
Q Consensus 766 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 837 (1057)
...++|+..+.||+|+||.||+|... .++.||||++... .......+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 34578999999999999999999754 6899999998643 233456778899999999999999999987543
Q ss_pred -CeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccccc
Q 001544 838 -DFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIA 916 (1057)
Q Consensus 838 -~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 916 (1057)
...++||||+++ ++.+.+.. .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH---~~givHrDikp~Nill~~~~~~kl~Dfg~~ 166 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLA 166 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEECCCCCEEEeeCccc
Confidence 357999999976 66665543 3788899999999999999999 999999999999999999999999999999
Q ss_pred ccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhcc---c---
Q 001544 917 KLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFL---P--- 990 (1057)
Q Consensus 917 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~---~--- 990 (1057)
+.... ........+|..|+|||++.+..++.++||||+||++|||++|+.||......+. +...+.... +
T Consensus 167 ~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~ 242 (355)
T cd07874 167 RTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFM 242 (355)
T ss_pred ccCCC---ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHH
Confidence 86422 2223345688999999999888899999999999999999999999865221110 000000000 0
Q ss_pred ----hhHHHhhhcccccc------------cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 991 ----ISMMKIIDANLLIT------------EDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 991 ----~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.......+...... ...........+.++.+++.+|++.||++|||+.|+++|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 243 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00001110000000 000000111234678999999999999999999999987
No 242
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.2e-34 Score=339.48 Aligned_cols=269 Identities=19% Similarity=0.213 Sum_probs=194.9
Q ss_pred HHHHhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCC------CCceeEeeeecc
Q 001544 764 LFQATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRH------RNLTKIISSCSN 836 (1057)
Q Consensus 764 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~l~~~~~~ 836 (1057)
+.....+|++.++||+|+||+||+|... +++.||||+++... .....+..|+++++.++| .+++++++++..
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 3345678999999999999999999764 68899999996432 223456678888877765 458889998865
Q ss_pred C-CeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCC-CCeEEccCCCCCeeeCCCC--------
Q 001544 837 E-DFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYS-APVIHCDLKPSNVLLDDNM-------- 906 (1057)
Q Consensus 837 ~-~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~Dlkp~Nill~~~~-------- 906 (1057)
+ .+.++|||++ +++|.+++.+.+ .+++.++..|+.||+.||+||| + .+||||||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~yLH---~~~gIiHrDlKP~NILl~~~~~~~~~~~~ 277 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMKHG-PFSHRHLAQIIFQTGVALDYFH---TELHLMHTDLKPENILMETSDTVVDPVTN 277 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hcCCeecCCCCHHHEEEecCCcccccccc
Confidence 4 5788999988 678888887654 5899999999999999999999 7 5999999999999998765
Q ss_pred --------cEEEEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccc
Q 001544 907 --------VAHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGE 978 (1057)
Q Consensus 907 --------~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~ 978 (1057)
.+||+|||.+... ........||+.|+|||++.+..++.++|||||||++|||++|+.||+.....+
T Consensus 278 ~~~~~~~~~vkl~DfG~~~~~-----~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~ 352 (467)
T PTZ00284 278 RALPPDPCRVRICDLGGCCDE-----RHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLE 352 (467)
T ss_pred cccCCCCceEEECCCCccccC-----ccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 4999999987642 122334578999999999999999999999999999999999999997532211
Q ss_pred cc----------hhhhhhhccchhHHHhhhcccccccchh-----------hHHHHHHHHHHHHHHhHcccCCCCCCCCH
Q 001544 979 MT----------LKHWVNDFLPISMMKIIDANLLITEDKH-----------FAAKEQCASSVFNLAMECTVESPDERITA 1037 (1057)
Q Consensus 979 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 1037 (1057)
.. ...|..........+.++.......... ........+.+.+|+.+||+.||++|||+
T Consensus 353 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta 432 (467)
T PTZ00284 353 HLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNA 432 (467)
T ss_pred HHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCH
Confidence 00 0111111000001111111000000000 00001124568899999999999999999
Q ss_pred HHHHHH
Q 001544 1038 KEIVRR 1043 (1057)
Q Consensus 1038 ~evl~~ 1043 (1057)
+|+++|
T Consensus 433 ~e~L~H 438 (467)
T PTZ00284 433 RQMTTH 438 (467)
T ss_pred HHHhcC
Confidence 999986
No 243
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=3.2e-37 Score=334.08 Aligned_cols=371 Identities=29% Similarity=0.406 Sum_probs=248.5
Q ss_pred cCCCCCcEEeCCCCCccc-cCCcccccccccceeecccccccCCCCccccccCCCCeEeccCCCCCCCCCcccccCCCCC
Q 001544 92 GNLSSLEILDLNFNRLSG-EIPWELGNLAKLEKLLLHNNFLTGTIPFSIFKLSSLLDLKLSDNNLTGTIPSHNLGNLSSL 170 (1057)
Q Consensus 92 ~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~l~~L 170 (1057)
+-|+..+-.|+++|.|+| ..|.....+++++.|.|...++. .+|.+++.+.+|++|.+++|+++.... .++.|
T Consensus 4 gVLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~~vhG--ELs~L--- 77 (1255)
T KOG0444|consen 4 GVLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLISVHG--ELSDL--- 77 (1255)
T ss_pred cccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhHhhhh--hhccc---
Confidence 446777889999999994 58999999999999999999988 788888888888888888888862211 13333
Q ss_pred ceeEccCCcccccCchhhhccccCCeeEeeccCCccccCccccCCCCcccEEEeeccccccCccccccCCCCCcEEEccC
Q 001544 171 QLLDLSDNQLSGSIPSFIFKISSLQALHFGNNRLSGELPANICDNLPFLNFFSVYKNMFYGGISSTLSNCKHLRILDLSF 250 (1057)
Q Consensus 171 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~Ls~ 250 (1057)
+.|+.+.+..|++..
T Consensus 78 ---------------------p~LRsv~~R~N~LKn-------------------------------------------- 92 (1255)
T KOG0444|consen 78 ---------------------PRLRSVIVRDNNLKN-------------------------------------------- 92 (1255)
T ss_pred ---------------------hhhHHHhhhcccccc--------------------------------------------
Confidence 444444444444431
Q ss_pred CCCcCCccccccCcCCCcEEeeeccccccccCccccccccccEEEeecCccccccCccccccccccEEEecCCccccCCC
Q 001544 251 NDLWGDIPKEIGNLTKLKELFLDFNILQGEIPHTVGNLHNLEYLSLVNNELVGTVPATIFNVSTLKLIELSNNTFFGSLP 330 (1057)
Q Consensus 251 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 330 (1057)
+-+|..+..+..|+.|+||+|+++ +.|..+...+++-.|+||+|+|. +||
T Consensus 93 ----sGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-------------------------tIP 142 (1255)
T KOG0444|consen 93 ----SGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-------------------------TIP 142 (1255)
T ss_pred ----CCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-------------------------cCC
Confidence 123333334444444444444444 44555555556666666666654 333
Q ss_pred CCcccCCCCCceEEecCccccccCCccccccccccccccccccccccccchhcccccccEEeccCcccCCCccccccccC
Q 001544 331 SSTDVQLPNLEELYLWGNNFSGTLPSFIFNASNLSKLSLGDNSFSGLIPNTFGNLRNLKRLRLYNNYLTSPELSFLSSLS 410 (1057)
Q Consensus 331 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 410 (1057)
...+.++..|-.|||++|++. .+|..+..+.+|++|+|++|.+...- +..++
T Consensus 143 n~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQ---------------------------LrQLP 194 (1255)
T KOG0444|consen 143 NSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQ---------------------------LRQLP 194 (1255)
T ss_pred chHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHH---------------------------HhcCc
Confidence 333334444444444444444 44555555666666666666654321 22233
Q ss_pred CCcchhhhhccCCCcccccccccccccccccEEEcCCCcccccccccccCccCCcEEEccCCcCCCCCCcccccccccce
Q 001544 411 NCKYLEIIALSGNPLNGIIPMSAGNLSHSLEELFMPDCNVSGRIPKEIGNLANLVTLDLGGNKFNGSIPIALGKLQKLQL 490 (1057)
Q Consensus 411 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~ 490 (1057)
.+++|++|.+|+.+=+ ...+|.++..+.+|..+|+|.|.+. .+|..+.++++|+.
T Consensus 195 smtsL~vLhms~TqRT------------------------l~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~Lrr 249 (1255)
T KOG0444|consen 195 SMTSLSVLHMSNTQRT------------------------LDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRR 249 (1255)
T ss_pred cchhhhhhhcccccch------------------------hhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhhe
Confidence 3444555555443321 1246777888889999999999998 78999999999999
Q ss_pred eecccccCcccCCcccccccccceEEecCeeeeecCCccccCcccccccccCCccccccccccccccccccEEEeccccc
Q 001544 491 LNLDDNKLEGSIPDDICGLVELYKLALGDNKLSGQIPACFGNLASLRELWLGPNELISFIPSTFWNIKDIMYVNFSSNFL 570 (1057)
Q Consensus 491 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 570 (1057)
|+||+|+|+ +.......-.+|++|+||.|+++ .+|+++..++.|+.|++.+|++.-
T Consensus 250 LNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~F---------------------- 305 (1255)
T KOG0444|consen 250 LNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTF---------------------- 305 (1255)
T ss_pred eccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccc----------------------
Confidence 999999998 44445555667777788888777 677777777777777777776421
Q ss_pred cCCCchhhccccccceeccccccccccccccccCccccceecccccccccccCccccccCccceecccCcccc
Q 001544 571 TGPLPLEIENLKALTTLDFSMNNLSGVIPTTIGGLKGLQYLFLGHNRLQGSIPDSVGDLISLKSLNLSNNNLS 643 (1057)
Q Consensus 571 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 643 (1057)
.| +|..++.+.+|+.+..++|++. .+|+.++.+..|+.|.|++|++- .+|+.+.-|+.|+.|||..|.--
T Consensus 306 eG-iPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnL 375 (1255)
T KOG0444|consen 306 EG-IPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNL 375 (1255)
T ss_pred cC-CccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCc
Confidence 22 5677778888888888888886 77888888888888888888877 67888888888888888887543
No 244
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=3.6e-35 Score=330.24 Aligned_cols=238 Identities=28% Similarity=0.355 Sum_probs=188.5
Q ss_pred ceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHH-HHHhcCCCCceeEeeeeccCCeeEEEEEEccC
Q 001544 775 NLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECE-VMKSIRHRNLTKIISSCSNEDFKALILEYMRN 849 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 849 (1057)
+.||+|+||+||+|+.. +|+.||||++.... ......+..|.. +++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999854 68999999996542 223344555554 46778999999999999999999999999999
Q ss_pred CChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccc
Q 001544 850 GSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQT 929 (1057)
Q Consensus 850 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 929 (1057)
|+|..++.... .+++.++..++.||++||+||| +.+|+||||||+||++++++.+||+|||+++..... .....
T Consensus 81 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~--~~~~~ 154 (325)
T cd05604 81 GELFFHLQRER-SFPEPRARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ--SDTTT 154 (325)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC--CCCcc
Confidence 99998887544 5899999999999999999999 999999999999999999999999999998753211 12223
Q ss_pred cccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhh
Q 001544 930 QTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHF 1009 (1057)
Q Consensus 930 ~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1057)
...||+.|+|||++.+..++.++||||+||++|||++|+.||......+ . ..........
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~-----~--------~~~~~~~~~~------- 214 (325)
T cd05604 155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE-----M--------YDNILHKPLV------- 214 (325)
T ss_pred cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH-----H--------HHHHHcCCcc-------
Confidence 4568999999999999999999999999999999999999986521110 0 0111111110
Q ss_pred HHHHHHHHHHHHHHhHcccCCCCCCCCHHH
Q 001544 1010 AAKEQCASSVFNLAMECTVESPDERITAKE 1039 (1057)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~e 1039 (1057)
..+..+.++.+++.+|++.+|.+||++++
T Consensus 215 -~~~~~~~~~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 215 -LRPGASLTAWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred -CCCCCCHHHHHHHHHHhccCHHhcCCCCC
Confidence 01124567889999999999999998763
No 245
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.6e-34 Score=317.13 Aligned_cols=249 Identities=28% Similarity=0.395 Sum_probs=204.0
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
++|+..+.||+|++|.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++.++...++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 36788899999999999999865 68999999986543 34456788999999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 847 MRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
+++++|.+++... .+++.++..++.|++.|++||| +.+++||||+|+||++++++.++++|||.++...... .
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--~ 153 (274)
T cd06609 81 CGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM--S 153 (274)
T ss_pred eCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcccccceeecccc--c
Confidence 9999999998765 5899999999999999999999 9999999999999999999999999999998763221 2
Q ss_pred ccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccc
Q 001544 927 TQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITED 1006 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1057)
......++..|+|||+..+..++.++||||||+++|||++|+.||......+. ...+.....
T Consensus 154 ~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~--------------~~~~~~~~~---- 215 (274)
T cd06609 154 KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV--------------LFLIPKNNP---- 215 (274)
T ss_pred ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH--------------HHHhhhcCC----
Confidence 22344678899999999888899999999999999999999999865321110 000000000
Q ss_pred hhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1007 KHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
..... ..++.++.+++.+|+..+|++||++++++++
T Consensus 216 ~~~~~-~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 216 PSLEG-NKFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred CCCcc-cccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 00000 1156678999999999999999999999875
No 246
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.6e-34 Score=319.72 Aligned_cols=266 Identities=24% Similarity=0.313 Sum_probs=195.0
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhc---CCCCceeEeeeecc-----CC
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSI---RHRNLTKIISSCSN-----ED 838 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~-----~~ 838 (1057)
+|++.+.||+|+||+||+|... +++.||+|.++... ......+.+|+++++++ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4788899999999999999765 68999999986432 12223456677777665 69999999998754 34
Q ss_pred eeEEEEEEccCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccc
Q 001544 839 FKALILEYMRNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAK 917 (1057)
Q Consensus 839 ~~~lV~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~ 917 (1057)
..++||||+++ +|.+++.... ..+++.++..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccCccc
Confidence 67899999975 8888886543 45899999999999999999999 9999999999999999999999999999998
Q ss_pred cccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhcc---chhHH
Q 001544 918 LLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFL---PISMM 994 (1057)
Q Consensus 918 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~---~~~~~ 994 (1057)
..... .......++..|+|||++.+..++.++||||+||++|||++|++||......+ .......... .....
T Consensus 157 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07863 157 IYSCQ---MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGLPPEDDWP 232 (288)
T ss_pred cccCc---ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH-HHHHHHHHhCCCChhhCc
Confidence 65321 12233467889999999988889999999999999999999999986532211 1111110000 00000
Q ss_pred Hhhh---cccc-cccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 995 KIID---ANLL-ITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 995 ~~~~---~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.... .... ..........+.++.++.+++.+|++.||++|||+.|+++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 233 RDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred ccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000 0000 00000011112456778999999999999999999999875
No 247
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2e-34 Score=315.13 Aligned_cols=250 Identities=26% Similarity=0.414 Sum_probs=201.1
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccch---------hHHHHHHHHHHHHHhcCCCCceeEeeeeccCCe
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHE---------RAFKSFDTECEVMKSIRHRNLTKIISSCSNEDF 839 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 839 (1057)
+|.+.+.||+|++|.||+|... +++.||+|.+..... ...+.+.+|++++++++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 4677899999999999999764 689999998854321 234678899999999999999999999999999
Q ss_pred eEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccc
Q 001544 840 KALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 919 (1057)
Q Consensus 840 ~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 919 (1057)
.++||||+++++|.+++.... .+++..+..++.|++.|++||| +.+++||||+|+||++++++.++|+|||.++..
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~ 156 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYG-AFEETLVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGISKKL 156 (267)
T ss_pred cEEEEEecCCCCHHHHHHhcc-CccHHHHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEEecccCCCccc
Confidence 999999999999999997653 5888999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCCc----cccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHH
Q 001544 920 IGEDQS----MTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMK 995 (1057)
Q Consensus 920 ~~~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1057)
...... .......++..|+|||...+..++.++|+||+||++|||++|+.||........ ...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-------------~~~ 223 (267)
T cd06628 157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA-------------IFK 223 (267)
T ss_pred ccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH-------------HHH
Confidence 422111 111223477889999999888899999999999999999999999875211100 001
Q ss_pred hhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 996 IIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 996 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.... .....+..++..+.+++.+||+.||++||++.|++++
T Consensus 224 ~~~~-------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 224 IGEN-------ASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred Hhcc-------CCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 0000 0011112456778999999999999999999999874
No 248
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.9e-34 Score=318.78 Aligned_cols=253 Identities=23% Similarity=0.371 Sum_probs=201.3
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc-chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ-HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
++|++.+.||+|+||.||+|... +++.||+|.++.. .+.....+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 36788899999999999999876 7899999998654 334457888999999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCC--ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 847 MRNGSLEKCLYSGN--YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
+++++|.+++.... ..+++..+..++.|+++|+.|||+ +.+|+||||||+||+++.++.+|++|||.+..+...
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 156 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS-- 156 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC--
Confidence 99999999887642 368999999999999999999992 259999999999999999999999999998765221
Q ss_pred ccccccccccccccCccccCCCC------CCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhh
Q 001544 925 SMTQTQTLATLGYMAPEYGREGR------VSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIID 998 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~~~------~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1057)
......++..|+|||.+.+.. ++.++|+||+||++|||++|+.||....... +.. ......+
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-----~~~-----~~~~~~~ 224 (286)
T cd06622 157 --LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN-----IFA-----QLSAIVD 224 (286)
T ss_pred --ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh-----HHH-----HHHHHhh
Confidence 122345778999999875443 4789999999999999999999986421110 000 0011111
Q ss_pred cccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 999 ANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
.. ....+..++.++.+++.+|+..+|++||++.+++++-
T Consensus 225 ~~-------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~ 263 (286)
T cd06622 225 GD-------PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHP 263 (286)
T ss_pred cC-------CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcCh
Confidence 00 0111234677889999999999999999999999863
No 249
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=5.6e-35 Score=328.18 Aligned_cols=237 Identities=26% Similarity=0.324 Sum_probs=186.8
Q ss_pred ceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHH-HHHhcCCCCceeEeeeeccCCeeEEEEEEccC
Q 001544 775 NLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECE-VMKSIRHRNLTKIISSCSNEDFKALILEYMRN 849 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 849 (1057)
++||+|+||.||+|+.. +++.||+|++.... ......+.+|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999865 68999999986432 222344555554 67889999999999999999999999999999
Q ss_pred CChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccc
Q 001544 850 GSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQT 929 (1057)
Q Consensus 850 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 929 (1057)
|+|.+++.... .+++.++..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++..... .....
T Consensus 81 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~--~~~~~ 154 (321)
T cd05603 81 GELFFHLQRER-CFLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP--EETTS 154 (321)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC--CCccc
Confidence 99998886543 5888889999999999999999 999999999999999999999999999998753211 12233
Q ss_pred cccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhh
Q 001544 930 QTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHF 1009 (1057)
Q Consensus 930 ~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1057)
...||+.|+|||.+.+..++.++||||+||++|||++|+.||..... .... ..+.....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~--------~~i~~~~~-------- 213 (321)
T cd05603 155 TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV-----SQMY--------DNILHKPL-------- 213 (321)
T ss_pred cccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH-----HHHH--------HHHhcCCC--------
Confidence 45689999999999888899999999999999999999999865211 1100 01111000
Q ss_pred HHHHHHHHHHHHHHhHcccCCCCCCCCHH
Q 001544 1010 AAKEQCASSVFNLAMECTVESPDERITAK 1038 (1057)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 1038 (1057)
..+...+.++.+++.+|++.||.+||++.
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 214 QLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 11122356788999999999999999764
No 250
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=8.2e-35 Score=324.62 Aligned_cols=194 Identities=25% Similarity=0.358 Sum_probs=169.6
Q ss_pred CCCCCceeccccCeEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHHHhcC-C-----CCceeEeeeeccCCeeEE
Q 001544 770 GFSENNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQHERAFKSFDTECEVMKSIR-H-----RNLTKIISSCSNEDFKAL 842 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~~~~~~~~~~~l 842 (1057)
+|++.++||+|+||.|-+|.+ ++++.||||+++... .-..+...|+.+|..++ | -|+|+++++|.-..+.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 788999999999999999975 479999999997543 33466678999999996 4 389999999999999999
Q ss_pred EEEEccCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC--CCcEEEEcccccccc
Q 001544 843 ILEYMRNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD--NMVAHLSDFGIAKLL 919 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~--~~~~kl~Dfg~a~~~ 919 (1057)
|+|.++. +|.+++.... ..++...++.|+.||+.||.+|| +.+|||+||||+|||+.+ ...+||+|||.|+..
T Consensus 266 VfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 266 VFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 9999966 9999998766 56899999999999999999999 999999999999999974 348999999999875
Q ss_pred cCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCc
Q 001544 920 IGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDE 973 (1057)
Q Consensus 920 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~ 973 (1057)
. .... .++.+..|+|||++.+.+|+.+.||||||||++||++|.+-|.+
T Consensus 342 ~----q~vy-tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG 390 (586)
T KOG0667|consen 342 S----QRVY-TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPG 390 (586)
T ss_pred C----Ccce-eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCC
Confidence 2 1222 56678899999999999999999999999999999999876654
No 251
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.3e-34 Score=324.21 Aligned_cols=272 Identities=20% Similarity=0.296 Sum_probs=199.1
Q ss_pred CCceeccc--cCeEEEEEEe-cCCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 773 ENNLIGRG--SFGSVYIARL-QNGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 773 ~~~~lg~G--~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
+.++||+| +|++||++.. .+|+.||||+++... ......+++|+++++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45789999 7889999975 478999999996542 334567888999999999999999999999999999999999
Q ss_pred cCCChhHHHhcC-CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 848 RNGSLEKCLYSG-NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 848 ~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++++||+.+..........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 999999998653 245899999999999999999999 9999999999999999999999999998754432111110
Q ss_pred -----ccccccccccccCccccCC--CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccch-------h
Q 001544 927 -----TQTQTLATLGYMAPEYGRE--GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPI-------S 992 (1057)
Q Consensus 927 -----~~~~~~~t~~y~aPE~~~~--~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------~ 992 (1057)
......++..|+|||++.+ ..++.++||||+||++|||++|+.||.............. ...+. .
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 237 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLN-GTVPCLLDTTTIP 237 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhc-CCccccccccchh
Confidence 1112345678999999865 4588999999999999999999999975322111111000 00000 0
Q ss_pred HHHh--------hhc-----------ccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH--HHHhH
Q 001544 993 MMKI--------IDA-----------NLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR--LLKIR 1048 (1057)
Q Consensus 993 ~~~~--------~~~-----------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~--L~~i~ 1048 (1057)
..+. .+. ..........+....+++++.+++.+||+.||++|||+.|+++| +++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~ 314 (327)
T cd08227 238 AEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 314 (327)
T ss_pred hhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcc
Confidence 0000 000 00000000011223456789999999999999999999999985 45544
No 252
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=4.3e-34 Score=312.26 Aligned_cols=251 Identities=23% Similarity=0.363 Sum_probs=197.6
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc-----hhHHHHHHHHHHHHHhcCCCCceeEeeeecc--CCee
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH-----ERAFKSFDTECEVMKSIRHRNLTKIISSCSN--EDFK 840 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 840 (1057)
.+|+..+.||+|+||.||+|... ++..||+|++.... ......+.+|++++++++||||+++++++.+ ....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 46888999999999999999764 68999999885432 2345678899999999999999999998865 4677
Q ss_pred EEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccccccccc
Q 001544 841 ALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLI 920 (1057)
Q Consensus 841 ~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 920 (1057)
++|+||+++++|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~ 157 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 157 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCCCccccc
Confidence 89999999999999987654 4889999999999999999999 9999999999999999999999999999987653
Q ss_pred CCCC-ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhc
Q 001544 921 GEDQ-SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDA 999 (1057)
Q Consensus 921 ~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1057)
.... ........++.+|+|||.+.+..++.++||||+||++||+++|+.||......+ ........
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~-------------~~~~~~~~ 224 (266)
T cd06651 158 TICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA-------------AIFKIATQ 224 (266)
T ss_pred cccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH-------------HHHHHhcC
Confidence 2111 111223457889999999998889999999999999999999999986521110 00000000
Q ss_pred ccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1000 NLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1000 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
. .....+..+...+.+++ +||..+|++||+++|+++|
T Consensus 225 ~------~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 225 P------TNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred C------CCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 0 01111233456677777 6888999999999999875
No 253
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.4e-34 Score=318.25 Aligned_cols=248 Identities=28% Similarity=0.387 Sum_probs=201.1
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
.|+..+.||+|+||.||+|... +++.||+|.++... ....+.+.+|++++++++||||+++++++..+...++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 3555688999999999999764 58899999986443 345578899999999999999999999999999999999999
Q ss_pred cCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccc
Q 001544 848 RNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT 927 (1057)
Q Consensus 848 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 927 (1057)
++++|.+++... .+++..+..++.|+++|++||| +.+++|+||+|+||++++++.++++|||++...... ...
T Consensus 85 ~~~~L~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~--~~~ 157 (277)
T cd06642 85 GGGSALDLLKPG--PLEETYIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT--QIK 157 (277)
T ss_pred CCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEccccccccccCc--chh
Confidence 999999988653 4889999999999999999999 899999999999999999999999999999765322 112
Q ss_pred cccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccch
Q 001544 928 QTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDK 1007 (1057)
Q Consensus 928 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1057)
.....++..|+|||++.+..++.++|||||||++|||++|+.||........ ..+ .....
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--~~~------------~~~~~------ 217 (277)
T cd06642 158 RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV--LFL------------IPKNS------ 217 (277)
T ss_pred hhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH--Hhh------------hhcCC------
Confidence 2234578899999999888899999999999999999999999865321110 000 00000
Q ss_pred hhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 1008 HFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
.......++.++.+++.+||+.+|++||++.|+++|-
T Consensus 218 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 254 (277)
T cd06642 218 PPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHK 254 (277)
T ss_pred CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhH
Confidence 0001123456788999999999999999999999863
No 254
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=3.6e-34 Score=311.02 Aligned_cols=250 Identities=23% Similarity=0.373 Sum_probs=204.8
Q ss_pred CCCCCceeccccCeEEEEEEe-cCCcEEEEEEeecc--chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQ--HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
+|+..++||+|+||.||.++. .+++.|++|.+... ......++.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 478889999999999999974 46899999998644 244567788999999999999999999999999999999999
Q ss_pred ccCCChhHHHhcC-CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 847 MRNGSLEKCLYSG-NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 847 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
+++++|.+++... ...+++.++..++.|+++|++||| +.+++||||+|+||++++++.+||+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~- 156 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS- 156 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence 9999999998765 356899999999999999999999 89999999999999999999999999999986532221
Q ss_pred cccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccccccc
Q 001544 926 MTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITE 1005 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1057)
......++..|+|||...+..++.++||||+|+++|||++|+.||...... .. .........
T Consensus 157 -~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-----~~--------~~~~~~~~~---- 218 (256)
T cd08221 157 -MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL-----NL--------VVKIVQGNY---- 218 (256)
T ss_pred -cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH-----HH--------HHHHHcCCC----
Confidence 223456789999999998888899999999999999999999998642111 00 111110000
Q ss_pred chhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 1006 DKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
.+....++.++.+++.+||..+|++||++.|++++.
T Consensus 219 ---~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 219 ---TPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred ---CCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 011134567789999999999999999999999864
No 255
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=5e-34 Score=312.36 Aligned_cols=251 Identities=24% Similarity=0.350 Sum_probs=189.4
Q ss_pred eeccccCeEEEEEEecC---CcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCCC
Q 001544 776 LIGRGSFGSVYIARLQN---GIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNGS 851 (1057)
Q Consensus 776 ~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gs 851 (1057)
.||+|+||+||+|...+ ...+|+|.+.... ......+.+|+++++.++||||+++++++...+..++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997543 4578888875443 3345678899999999999999999999999999999999999999
Q ss_pred hhHHHhcCC----ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccc
Q 001544 852 LEKCLYSGN----YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT 927 (1057)
Q Consensus 852 L~~~l~~~~----~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 927 (1057)
|.+++.... ...++.....++.|++.|++||| +.+|+||||||+||++++++.+||+|||++...........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHH---hcCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 999987644 23467788999999999999999 99999999999999999999999999999875432222222
Q ss_pred cccccccccccCccccC-------CCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhc
Q 001544 928 QTQTLATLGYMAPEYGR-------EGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDA 999 (1057)
Q Consensus 928 ~~~~~~t~~y~aPE~~~-------~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1057)
.....++..|+|||+.. ...++.++||||+||++|||++ |..||......+ ... .....
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~------------~~~~~ 225 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-VLK------------QVVRE 225 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHH------------HHhhc
Confidence 23334567899999864 3456889999999999999999 777876522111 000 00000
Q ss_pred ccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHH
Q 001544 1000 NLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLL 1045 (1057)
Q Consensus 1000 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1045 (1057)
...... .......++..+.+++..|| .||++||+++||++.+.
T Consensus 226 ~~~~~~--~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 226 QDIKLP--KPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred cCccCC--CCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 000000 00112245677788999998 59999999999998763
No 256
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=2e-34 Score=318.59 Aligned_cols=259 Identities=23% Similarity=0.331 Sum_probs=201.3
Q ss_pred HHHHHHhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhc-CCCCceeEeeeec----
Q 001544 762 LELFQATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSI-RHRNLTKIISSCS---- 835 (1057)
Q Consensus 762 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~---- 835 (1057)
+++..+.++|++.+.||+|+||.||+|... +++.||+|+++.... ....+.+|+.+++++ +||||+++++++.
T Consensus 11 ~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 89 (286)
T cd06638 11 DSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD-IDEEIEAEYNILKALSDHPNVVKFYGMYYKKDV 89 (286)
T ss_pred ecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc-hHHHHHHHHHHHHHHhcCCCeeeeeeeeeeccc
Confidence 344457789999999999999999999764 688999998864322 235678899999999 6999999999873
Q ss_pred -cCCeeEEEEEEccCCChhHHHhc---CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEE
Q 001544 836 -NEDFKALILEYMRNGSLEKCLYS---GNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLS 911 (1057)
Q Consensus 836 -~~~~~~lV~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 911 (1057)
.++..++||||+++++|.+++.. ....+++..+..++.|+++|+.||| +.+++||||||+||++++++.+|++
T Consensus 90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~kl~ 166 (286)
T cd06638 90 KNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH---VNKTIHRDVKGNNILLTTEGGVKLV 166 (286)
T ss_pred CCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH---hCCccccCCCHHhEEECCCCCEEEc
Confidence 45678999999999999988753 2345889999999999999999999 9999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCC-----CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhh
Q 001544 912 DFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGRE-----GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVN 986 (1057)
Q Consensus 912 Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~ 986 (1057)
|||+++.+... ........++..|+|||++.. ..++.++||||+||++|||++|+.||......+ .+.
T Consensus 167 dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~----~~~- 239 (286)
T cd06638 167 DFGVSAQLTST--RLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR----ALF- 239 (286)
T ss_pred cCCceeecccC--CCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH----HHh-
Confidence 99998865322 122233468899999998753 447889999999999999999999986521110 000
Q ss_pred hccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 987 DFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
.. ... .......+..++.++.+++.+||+.||++||++.|++++.
T Consensus 240 --------~~-~~~----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 240 --------KI-PRN----PPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred --------hc-ccc----CCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 00 000 0000011122355788999999999999999999999874
No 257
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.5e-34 Score=319.22 Aligned_cols=268 Identities=24% Similarity=0.275 Sum_probs=199.8
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
+|+..+.||+|+||.||+|+.. +|+.||+|+++... ......+.+|++++++++||||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4778899999999999999865 68999999986432 22335677899999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 847 MRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
+++ +|.+++......+++..+..++.||++||+||| +.+++||||||+||+++.++.+||+|||+++..... ..
T Consensus 81 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~--~~ 154 (284)
T cd07839 81 CDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP--VR 154 (284)
T ss_pred CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCC--CC
Confidence 975 888887765566999999999999999999999 899999999999999999999999999999764221 12
Q ss_pred ccccccccccccCccccCCC-CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhcc--chh-H---HHhhhc
Q 001544 927 TQTQTLATLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFL--PIS-M---MKIIDA 999 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~--~~~-~---~~~~~~ 999 (1057)
......++..|+|||.+.+. .++.++||||+||++|||++|+.|+......+..+........ +.. . ....+.
T Consensus 155 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07839 155 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDY 234 (284)
T ss_pred CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccc
Confidence 22334578899999987664 4689999999999999999999886432221111111000000 000 0 000000
Q ss_pred cccccc---chhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1000 NLLITE---DKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1000 ~~~~~~---~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
...... .........++.++.+++.+||+.||++|||++|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 235 KPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred cccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 000000 00011112356788999999999999999999999875
No 258
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.1e-34 Score=325.36 Aligned_cols=264 Identities=20% Similarity=0.236 Sum_probs=196.5
Q ss_pred HhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
...+|++.+.||+|+||.||+|... +++.||+|+.... ....|+.++++++||||+++++++..++..++|+|
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 4567999999999999999999865 5788999975322 23468999999999999999999999999999999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
|+. ++|.+++......+++.++..|+.||+.||+||| +++|+||||||+||+++.++.+||+|||.++.... .
T Consensus 138 ~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~---~ 210 (357)
T PHA03209 138 HYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVV---A 210 (357)
T ss_pred ccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecCcccccccc---C
Confidence 995 5888888776677999999999999999999999 99999999999999999999999999999975321 1
Q ss_pred cccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCC-Ccccccccc--------hhhhhhhcc--chh--
Q 001544 926 MTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPT-DEIFSGEMT--------LKHWVNDFL--PIS-- 992 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~-~~~~~~~~~--------~~~~~~~~~--~~~-- 992 (1057)
.......||..|+|||++.+..++.++|||||||++|||+++..|+ ......... +...+.... +..
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 290 (357)
T PHA03209 211 PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFP 290 (357)
T ss_pred cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcC
Confidence 1223456899999999999989999999999999999999966553 332111000 000000000 000
Q ss_pred -------HHHhhhcccc-cccchhh--HHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 993 -------MMKIIDANLL-ITEDKHF--AAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 993 -------~~~~~~~~~~-~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
....++.... ..+.... .....++.++.+++.+||+.||++||||.|+++|
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 291 RDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY 351 (357)
T ss_pred CCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence 0000000000 0000000 0111345567789999999999999999999986
No 259
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.9e-34 Score=311.81 Aligned_cols=249 Identities=21% Similarity=0.373 Sum_probs=203.1
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc--chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ--HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
+|++.+.||+|+||.||++... +|+.||+|++... .....+++.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4788899999999999999754 6899999998643 233456789999999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 847 MRNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
+++++|.+++.... ..+++.++..++.|++.|++||| +.+++|+||+|+||+++.++.++++|||.+.......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 155 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV-- 155 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch--
Confidence 99999999887643 35789999999999999999999 8999999999999999999999999999997653221
Q ss_pred cccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccccccc
Q 001544 926 MTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITE 1005 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1057)
.......++..|+|||+..+..++.++|+|||||++|||++|+.||..... ... ........
T Consensus 156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-----~~~--------~~~~~~~~----- 217 (256)
T cd08218 156 ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM-----KNL--------VLKIIRGS----- 217 (256)
T ss_pred hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH-----HHH--------HHHHhcCC-----
Confidence 122234578889999999888899999999999999999999999864211 000 01111000
Q ss_pred chhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1006 DKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
....+..++.++.+++.+||+.+|++||++.|+++|
T Consensus 218 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 218 --YPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred --CCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 011123456778999999999999999999999985
No 260
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=5.8e-34 Score=319.81 Aligned_cols=194 Identities=21% Similarity=0.310 Sum_probs=159.2
Q ss_pred CceeccccCeEEEEEEec---CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeecc--CCeeEEEEEEcc
Q 001544 774 NNLIGRGSFGSVYIARLQ---NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSN--EDFKALILEYMR 848 (1057)
Q Consensus 774 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lV~E~~~ 848 (1057)
.++||+|+||+||+|+.. +++.||+|.+..... ...+.+|++++++++||||+++++++.. +...++||||++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC--cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 368999999999999854 468899999864332 2456789999999999999999998843 567889999986
Q ss_pred CCChhHHHhcC--------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeee----CCCCcEEEEccccc
Q 001544 849 NGSLEKCLYSG--------NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL----DDNMVAHLSDFGIA 916 (1057)
Q Consensus 849 ~gsL~~~l~~~--------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill----~~~~~~kl~Dfg~a 916 (1057)
+ +|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||++
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred C-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 5 887776432 135889999999999999999999 9999999999999999 46689999999999
Q ss_pred ccccCCCC-ccccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCc
Q 001544 917 KLLIGEDQ-SMTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDE 973 (1057)
Q Consensus 917 ~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~ 973 (1057)
+.+..... ........+|+.|+|||++.+ ..++.++||||+||++|||++|++||..
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 86532211 122234578999999998876 4588999999999999999999999964
No 261
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=4.4e-34 Score=310.56 Aligned_cols=249 Identities=24% Similarity=0.403 Sum_probs=200.7
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeecc-CCeeEEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSN-EDFKALILE 845 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lV~E 845 (1057)
+|++.+.||+|++|.||+|... +++.||+|.+.... ....+.+.+|++++++++|||++++++.+.. ....++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4788999999999999999865 57899999986432 3445678899999999999999999998764 446789999
Q ss_pred EccCCChhHHHhcC-CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 846 YMRNGSLEKCLYSG-NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
|+++++|.+++... ...+++.++..++.|++.|++||| +.+++||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~- 156 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC- 156 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecccceEEecccC-
Confidence 99999999998764 345899999999999999999999 9999999999999999999999999999998653221
Q ss_pred ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccc
Q 001544 925 SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLIT 1004 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1057)
.......+++.|+|||+..+..++.++||||+|+++|||++|+.||..... ..+. ........
T Consensus 157 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-----~~~~--------~~~~~~~~--- 219 (257)
T cd08223 157 -DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM-----NSLV--------YRIIEGKL--- 219 (257)
T ss_pred -CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----HHHH--------HHHHhcCC---
Confidence 222334578899999999988999999999999999999999999864211 1110 00100000
Q ss_pred cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1005 EDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
...+...+.++.+++.+|++.+|++||++.|++++
T Consensus 220 ----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 220 ----PPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred ----CCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 01112456778999999999999999999999875
No 262
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.2e-34 Score=329.27 Aligned_cols=266 Identities=21% Similarity=0.234 Sum_probs=198.0
Q ss_pred HhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc--chhHHHHHHHHHHHHHhcCCCCceeEeeeeccC------
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ--HERAFKSFDTECEVMKSIRHRNLTKIISSCSNE------ 837 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 837 (1057)
..++|+..+.||+|+||.||+|... .++.||||++... .......+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 4568999999999999999999854 6889999998643 233456788899999999999999999987543
Q ss_pred CeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccc
Q 001544 838 DFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAK 917 (1057)
Q Consensus 838 ~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~ 917 (1057)
...|+||||+++ ++.+.+.. .+++.++..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 174 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh---cCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEEeCCCcc
Confidence 357999999976 67766643 3788899999999999999999 9999999999999999999999999999998
Q ss_pred cccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccc--hhHHH
Q 001544 918 LLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLP--ISMMK 995 (1057)
Q Consensus 918 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~ 995 (1057)
.... ........+|..|+|||++.+..++.++||||+||++|||++|+.||......+ .+...+..... ....+
T Consensus 175 ~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~ 250 (364)
T cd07875 175 TAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLGTPCPEFMK 250 (364)
T ss_pred ccCC---CCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHH
Confidence 6422 222234568899999999999899999999999999999999999996532111 11111110000 00000
Q ss_pred --------hhhcccccc------------cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 996 --------IIDANLLIT------------EDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 996 --------~~~~~~~~~------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
..+...... .............++.+++.+|++.||++|||+.|+++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred hhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000000 000000011124578899999999999999999999987
No 263
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=4.6e-34 Score=315.79 Aligned_cols=268 Identities=23% Similarity=0.330 Sum_probs=202.5
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
++|+..+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++|||++++++++..+...++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 36888899999999999999876 68999999985432 2234567899999999999999999999999999999999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
|++++++..+..... .+++.++..++.|++.||+||| +.+++||||||+||++++++.++|+|||++........
T Consensus 81 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~- 155 (286)
T cd07847 81 YCDHTVLNELEKNPR-GVPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD- 155 (286)
T ss_pred ccCccHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECccccceecCCCcc-
Confidence 999998888765443 5899999999999999999999 89999999999999999999999999999987633221
Q ss_pred cccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccch--hhhhhhccchhHHHhhhccc-
Q 001544 926 MTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTL--KHWVNDFLPISMMKIIDANL- 1001 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~- 1001 (1057)
......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||......+... ........+ ......+...
T Consensus 156 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 233 (286)
T cd07847 156 -DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIP-RHQQIFSTNQF 233 (286)
T ss_pred -cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh-HHhhhcccccc
Confidence 2223457788999998765 557899999999999999999999997533221110 000001000 0000100000
Q ss_pred -----ccccc---hhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1002 -----LITED---KHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1002 -----~~~~~---~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
..... .........+..+.+++.+||+.+|++||++.|++.|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 234 FKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred cccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 00000 0001112346788999999999999999999999875
No 264
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=3.5e-34 Score=314.72 Aligned_cols=254 Identities=26% Similarity=0.451 Sum_probs=203.6
Q ss_pred CCCCCCceeccccCeEEEEEEec------CCcEEEEEEeeccchh-HHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ------NGIEVAVKTFDLQHER-AFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKA 841 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 841 (1057)
++|+..+.||+|+||+||+|+.+ +.+.||+|.+...... ..+.+.+|++++++++||||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 46888899999999999999854 3467999988654433 5678999999999999999999999999999999
Q ss_pred EEEEEccCCChhHHHhcCC--------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcc
Q 001544 842 LILEYMRNGSLEKCLYSGN--------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDF 913 (1057)
Q Consensus 842 lV~E~~~~gsL~~~l~~~~--------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 913 (1057)
+||||+++|+|.+++.... ..+++.++..++.|++.||+||| +.+|+||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh---hcCcccCcCccceEEEeCCCcEEEccc
Confidence 9999999999999987544 15899999999999999999999 999999999999999999999999999
Q ss_pred cccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchh
Q 001544 914 GIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPIS 992 (1057)
Q Consensus 914 g~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 992 (1057)
|++...... .........++..|+|||...+..++.++||||+|+++||+++ |..||....... ....
T Consensus 162 ~~~~~~~~~-~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~--~~~~-------- 230 (275)
T cd05046 162 SLSKDVYNS-EYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE--VLNR-------- 230 (275)
T ss_pred ccccccCcc-cccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH--HHHH--------
Confidence 998754222 1222233356778999999888888999999999999999999 777875421111 0000
Q ss_pred HHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHH
Q 001544 993 MMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLL 1045 (1057)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1045 (1057)
...... .+.....++..+.+++.+|++.+|++||++.|++++|.
T Consensus 231 ---~~~~~~------~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 231 ---LQAGKL------ELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred ---HHcCCc------CCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 000000 01111245678999999999999999999999999875
No 265
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.8e-34 Score=318.55 Aligned_cols=265 Identities=22% Similarity=0.321 Sum_probs=206.6
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
++|++.+.||+|+||+||+|... +|+.||+|++.... ....+.+.+|+++++.++||||+++++++......++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 46778899999999999999855 68999999886543 34467889999999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 847 MRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
+++++|.+++...+ .+++..+..++.+++.|+.|||+ ..+++||||||+||++++++.++|+|||++......
T Consensus 85 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~---- 157 (284)
T cd06620 85 MDCGSLDRIYKKGG-PIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS---- 157 (284)
T ss_pred CCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh----
Confidence 99999999887644 58999999999999999999993 258999999999999999999999999998754211
Q ss_pred ccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccc
Q 001544 927 TQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITED 1006 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1057)
......++..|+|||++.+..++.++|+|||||++||+++|+.||......+... ..+....+........ ..
T Consensus 158 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~ 230 (284)
T cd06620 158 IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQ------DDPMGILDLLQQIVQE-PP 230 (284)
T ss_pred ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhh------hhhhHHHHHHHHHhhc-cC
Confidence 1123468899999999888889999999999999999999999997643221100 0000111111111000 00
Q ss_pred hhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhH
Q 001544 1007 KHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIR 1048 (1057)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~ 1048 (1057)
...+ ...++.++.+++.+|++.||++||++.|++++..-++
T Consensus 231 ~~~~-~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 231 PRLP-SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred CCCC-chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 0111 1235677899999999999999999999999854443
No 266
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.4e-34 Score=348.28 Aligned_cols=255 Identities=21% Similarity=0.309 Sum_probs=197.5
Q ss_pred HHhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc--chhHHHHHHHHHHHHHhcCCCCceeEeeeecc--CCee
Q 001544 766 QATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ--HERAFKSFDTECEVMKSIRHRNLTKIISSCSN--EDFK 840 (1057)
Q Consensus 766 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 840 (1057)
...++|++.+.||+|+||+||+|... ++..||+|++... .......+..|+.++++++||||++++++|.+ .+..
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 34568999999999999999999865 5788999998643 33445778999999999999999999998844 4678
Q ss_pred EEEEEEccCCChhHHHhcC---CccCCHHHHHHHHHHHHHHHHHHHhCC----CCCeEEccCCCCCeeeCC---------
Q 001544 841 ALILEYMRNGSLEKCLYSG---NYILDIFQRLNIMIDVASALEYLHFGY----SAPVIHCDLKPSNVLLDD--------- 904 (1057)
Q Consensus 841 ~lV~E~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~----~~~ivH~Dlkp~Nill~~--------- 904 (1057)
|+||||+++|+|.+++... ...+++..++.|+.||+.||+|||... ..+||||||||+|||++.
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 9999999999999988653 245899999999999999999999321 145999999999999964
Q ss_pred --------CCcEEEEcccccccccCCCCccccccccccccccCccccCC--CCCCccchHHHHHHHHHHHhhCCCCCCcc
Q 001544 905 --------NMVAHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGRE--GRVSTKGDVYSFGILLMETFTRRKPTDEI 974 (1057)
Q Consensus 905 --------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~Dv~s~G~il~elltg~~p~~~~ 974 (1057)
.+.+||+|||++..+... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~---s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~ 246 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIE---SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKA 246 (1021)
T ss_pred ccccccCCCCceEEccCCcccccccc---ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcC
Confidence 335899999999865221 12234568999999998754 45889999999999999999999998642
Q ss_pred cccccchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 975 FSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 975 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.. ...++ ..+.... ..+ ....+.++.+|+..||..+|++||++.|++++
T Consensus 247 ~~----~~qli---------~~lk~~p------~lp-i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 247 NN----FSQLI---------SELKRGP------DLP-IKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred Cc----HHHHH---------HHHhcCC------CCC-cCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 11 11111 1110000 000 01235678999999999999999999999864
No 267
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=8.5e-35 Score=316.19 Aligned_cols=239 Identities=25% Similarity=0.377 Sum_probs=190.7
Q ss_pred ceeccccCeEEEEEEecC--------CcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 775 NLIGRGSFGSVYIARLQN--------GIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
+.||+|+||+||+|.... ...||+|.+........+.+.+|+.++++++|||++++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 469999999999997532 335889988665555567889999999999999999999999998999999999
Q ss_pred ccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc--------EEEEccccccc
Q 001544 847 MRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMV--------AHLSDFGIAKL 918 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~--------~kl~Dfg~a~~ 918 (1057)
+++|+|.+++...+..+++..+..++.||+.|++||| +++|+||||||+||+++.++. ++++|||.+..
T Consensus 81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~ 157 (258)
T cd05078 81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT 157 (258)
T ss_pred CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence 9999999999877667899999999999999999999 999999999999999987765 69999998865
Q ss_pred ccCCCCccccccccccccccCccccCCC-CCCccchHHHHHHHHHHHhhCC-CCCCcccccccchhhhhhhccchhHHHh
Q 001544 919 LIGEDQSMTQTQTLATLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRR-KPTDEIFSGEMTLKHWVNDFLPISMMKI 996 (1057)
Q Consensus 919 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1057)
... .....++..|+|||++.+. .++.++||||+|+++|||++|. .|+...... .....
T Consensus 158 ~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~--------------~~~~~ 217 (258)
T cd05078 158 VLP------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ--------------KKLQF 217 (258)
T ss_pred cCC------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH--------------HHHHH
Confidence 422 1224577889999998764 5789999999999999999995 454331110 00001
Q ss_pred hhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 997 IDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 997 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
..... ..+.....++.+++.+||+.+|++|||++|+++.|
T Consensus 218 ~~~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 218 YEDRH--------QLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred HHccc--------cCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 10000 01112345688999999999999999999999886
No 268
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=5.4e-34 Score=309.98 Aligned_cols=250 Identities=30% Similarity=0.586 Sum_probs=201.6
Q ss_pred CCCCceeccccCeEEEEEEecC-----CcEEEEEEeeccchh-HHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 771 FSENNLIGRGSFGSVYIARLQN-----GIEVAVKTFDLQHER-AFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
|++.+.||+|+||.||+|...+ +..||+|+++..... ..+.+..|++++++++|+||+++++++.+.+..++||
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3566899999999999998653 388999999655433 5678999999999999999999999999999999999
Q ss_pred EEccCCChhHHHhcCCcc-CCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC
Q 001544 845 EYMRNGSLEKCLYSGNYI-LDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~-l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 923 (1057)
||+++++|.+++...... +++.++..++.|++.|++||| +.+++||||||+||+++.++.++++|||.++......
T Consensus 81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHh---cCCeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 999999999998765544 899999999999999999999 9999999999999999999999999999998764332
Q ss_pred CccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccc
Q 001544 924 QSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLL 1002 (1057)
Q Consensus 924 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1057)
.... ....++..|+|||...+..++.++||||+|+++|||++ |+.||..... .. .........
T Consensus 158 ~~~~-~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~-----~~---------~~~~~~~~~- 221 (258)
T smart00219 158 YYKK-KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN-----EE---------VLEYLKKGY- 221 (258)
T ss_pred cccc-ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH-----HH---------HHHHHhcCC-
Confidence 2111 12336789999999988889999999999999999998 7787754111 00 011111100
Q ss_pred cccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 1003 ITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
.......++.++.+++.+|+..+|++|||+.|+++.|
T Consensus 222 -----~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 222 -----RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -----CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 0111123577899999999999999999999998764
No 269
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=5.2e-34 Score=310.20 Aligned_cols=248 Identities=26% Similarity=0.369 Sum_probs=201.8
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc-----hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH-----ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALI 843 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 843 (1057)
+|+..+.||+|+||+||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4677899999999999999876 78999999986533 23557889999999999999999999999999999999
Q ss_pred EEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC
Q 001544 844 LEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 923 (1057)
+||+++++|.+++.... .+++..+..++.|+++|++||| +.+++||||+|+||+++.++.+||+|||.+.......
T Consensus 81 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~ 156 (258)
T cd06632 81 LELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS 156 (258)
T ss_pred EEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccceeccccc
Confidence 99999999999987654 4889999999999999999999 9999999999999999999999999999987653222
Q ss_pred CccccccccccccccCccccCCCC-CCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccc
Q 001544 924 QSMTQTQTLATLGYMAPEYGREGR-VSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLL 1002 (1057)
Q Consensus 924 ~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1057)
......++..|+|||...... ++.++|+||+|+++||+++|+.||......+.. .......
T Consensus 157 ---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~-------------~~~~~~~-- 218 (258)
T cd06632 157 ---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAV-------------FKIGRSK-- 218 (258)
T ss_pred ---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHH-------------HHHHhcc--
Confidence 223445788999999887666 899999999999999999999998763211000 0000000
Q ss_pred cccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1003 ITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.....+..++.++.+++.+||+.+|++||++.|++++
T Consensus 219 ----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 219 ----ELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred ----cCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 0001112346778899999999999999999999875
No 270
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=9.5e-34 Score=310.75 Aligned_cols=255 Identities=26% Similarity=0.407 Sum_probs=199.8
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc----------hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCC
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH----------ERAFKSFDTECEVMKSIRHRNLTKIISSCSNED 838 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 838 (1057)
+|...+.||+|+||.||+|... +|+.||||.++... ....+.+.+|++++++++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4667889999999999999754 68999999885321 112356788999999999999999999999999
Q ss_pred eeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccccccc
Q 001544 839 FKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 918 (1057)
Q Consensus 839 ~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 918 (1057)
..++||||+++++|.+++.... .+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++++|||.++.
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~ 157 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYG-RFEEQLVRFFTEQVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGISKK 157 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHh---hCCeeecCCChhhEEEcCCCeEEEeecccccc
Confidence 9999999999999999987764 5899999999999999999999 89999999999999999999999999999976
Q ss_pred ccCCCCccccccccccccccCccccCCCC--CCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHh
Q 001544 919 LIGEDQSMTQTQTLATLGYMAPEYGREGR--VSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKI 996 (1057)
Q Consensus 919 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~--~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1057)
..............++..|+|||...... ++.++||||+|+++||+++|..||...... ..+ .+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~----~~~---------~~~ 224 (272)
T cd06629 158 SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI----AAM---------FKL 224 (272)
T ss_pred ccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH----HHH---------HHh
Confidence 43221112223345788999999877654 789999999999999999999998542111 100 000
Q ss_pred hhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 997 IDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 997 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
......... .......++.++.+++.+|+.++|++||++.|+++|
T Consensus 225 ~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 225 GNKRSAPPI--PPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred hccccCCcC--CccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 000000000 001112456789999999999999999999999876
No 271
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.1e-33 Score=308.85 Aligned_cols=251 Identities=23% Similarity=0.327 Sum_probs=198.1
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc-----hhHHHHHHHHHHHHHhcCCCCceeEeeeeccC--Cee
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH-----ERAFKSFDTECEVMKSIRHRNLTKIISSCSNE--DFK 840 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 840 (1057)
++|++.+.||+|+||.||+|... +++.||||.+.... ....+.+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 47888999999999999999865 58999999885321 23456888999999999999999999998663 567
Q ss_pred EEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccccccccc
Q 001544 841 ALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLI 920 (1057)
Q Consensus 841 ~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 920 (1057)
++||||+++++|.+++.... .+++..+.+++.|++.||+||| +.+++||||||+||+++.++.++|+|||.++...
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG-ALTENVTRKYTRQILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQ 157 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEEECcCccccccc
Confidence 89999999999999987654 4788899999999999999999 9999999999999999999999999999987653
Q ss_pred CCCC-ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhc
Q 001544 921 GEDQ-SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDA 999 (1057)
Q Consensus 921 ~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1057)
.... ........++..|+|||...+..++.++|||||||++|||++|+.||....... . ..+....
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~----~---------~~~~~~~ 224 (265)
T cd06652 158 TICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA----A---------IFKIATQ 224 (265)
T ss_pred cccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHH----H---------HHHHhcC
Confidence 2111 111223457889999999988889999999999999999999999986521110 0 0000000
Q ss_pred ccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1000 NLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1000 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
......+...+..+.+++.+|+. +|++||+++|++++
T Consensus 225 ------~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 225 ------PTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred ------CCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 00111123455678899999995 99999999999875
No 272
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=8.7e-34 Score=313.57 Aligned_cols=268 Identities=21% Similarity=0.274 Sum_probs=204.0
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
+|++.+.||+|+||.||+|... +|+.||||++.... ......+.+|++++++++||||+++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4778899999999999999864 68999999986543 33457889999999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 847 MRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
+ +++|.+++......+++.++..++.||++||+||| +.+++|+||||+||+++.++.++++|||.+........ .
T Consensus 81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-~ 155 (286)
T cd07832 81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP-R 155 (286)
T ss_pred c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-C
Confidence 9 99999998776677999999999999999999999 99999999999999999999999999999986533221 2
Q ss_pred ccccccccccccCccccCCC-CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhcc---chhHHHhhh----
Q 001544 927 TQTQTLATLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFL---PISMMKIID---- 998 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~---- 998 (1057)
......++..|+|||.+.+. .++.++||||+|+++|||++|++||...... ..+........ +....+..+
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07832 156 LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI-EQLAIVFRTLGTPNEETWPGLTSLPDY 234 (286)
T ss_pred ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH-HHHHHHHHHcCCCChHHHhhccCcchh
Confidence 23345688899999987654 4689999999999999999998877542211 11110000000 000000000
Q ss_pred -cccc-cccchhh-HHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 999 -ANLL-ITEDKHF-AAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 999 -~~~~-~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.... ....... ...+..+.++.+++.+|+..+|++||+++++++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 235 NKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred hcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000 0000000 1112346789999999999999999999999876
No 273
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=6.2e-34 Score=315.27 Aligned_cols=250 Identities=26% Similarity=0.346 Sum_probs=205.0
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
.+|++.+.||+|+||.||+|... ++..||+|.+........+.+.+|+.++++++|||++++++++...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 57888999999999999999754 68899999987655555678899999999999999999999999999999999999
Q ss_pred cCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccc
Q 001544 848 RNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT 927 (1057)
Q Consensus 848 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 927 (1057)
++++|.+++.+. .+++.++..++.|++.|++||| +.+++||||||+||+++.++.++|+|||++........ .
T Consensus 99 ~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~--~ 171 (293)
T cd06647 99 AGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--K 171 (293)
T ss_pred CCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc--c
Confidence 999999998754 3788999999999999999999 99999999999999999999999999999876533221 2
Q ss_pred cccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccch
Q 001544 928 QTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDK 1007 (1057)
Q Consensus 928 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1057)
.....+++.|+|||......++.++||||||+++||+++|+.||......+.....+. ....
T Consensus 172 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~------------------~~~~ 233 (293)
T cd06647 172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT------------------NGTP 233 (293)
T ss_pred cccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhc------------------CCCC
Confidence 2334678899999999888899999999999999999999999865322111000000 0001
Q ss_pred hhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1008 HFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
........+..+.+++.+||..+|++||++.+++.|
T Consensus 234 ~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 234 ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111223356678899999999999999999999987
No 274
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=5.5e-34 Score=314.38 Aligned_cols=259 Identities=22% Similarity=0.317 Sum_probs=202.9
Q ss_pred CHHHHHHHhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhc-CCCCceeEeeeecc-
Q 001544 760 SYLELFQATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSI-RHRNLTKIISSCSN- 836 (1057)
Q Consensus 760 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~- 836 (1057)
++.++......|++.+.||+|+||.||+|... +++.||+|++..... ....+..|+.++.++ +||||+++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTED-EEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChH-HHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 44555566778999999999999999999864 689999999865433 346688899999998 69999999999842
Q ss_pred -----CCeeEEEEEEccCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEE
Q 001544 837 -----EDFKALILEYMRNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHL 910 (1057)
Q Consensus 837 -----~~~~~lV~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 910 (1057)
.+..++||||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||++++++.++|
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~nili~~~~~~~l 162 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLH---AHKVIHRDIKGQNVLLTENAEVKL 162 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEE
Confidence 467899999999999999887643 45888889999999999999999 999999999999999999999999
Q ss_pred EcccccccccCCCCccccccccccccccCccccC-----CCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhh
Q 001544 911 SDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGR-----EGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWV 985 (1057)
Q Consensus 911 ~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~ 985 (1057)
+|||++...... ........++..|+|||.+. ...++.++||||+||++|||++|+.||......+..
T Consensus 163 ~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~----- 235 (282)
T cd06636 163 VDFGVSAQLDRT--VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL----- 235 (282)
T ss_pred eeCcchhhhhcc--ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh-----
Confidence 999998754211 11223346788999999875 345788999999999999999999998652211100
Q ss_pred hhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 986 NDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
...... . ........++.++.+++.+||+.||.+||++.|++++
T Consensus 236 --------~~~~~~-~-----~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 236 --------FLIPRN-P-----PPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred --------hhHhhC-C-----CCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 000000 0 0001112456789999999999999999999999864
No 275
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=5.6e-34 Score=315.82 Aligned_cols=259 Identities=22% Similarity=0.304 Sum_probs=201.5
Q ss_pred HHHHHHHhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhc-CCCCceeEeeeeccC-
Q 001544 761 YLELFQATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSI-RHRNLTKIISSCSNE- 837 (1057)
Q Consensus 761 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~- 837 (1057)
..++..+.++|++.+.||+|+||.||+|... +++.||+|++.... .....+.+|+.+++++ +|||++++++++...
T Consensus 14 ~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~ 92 (291)
T cd06639 14 LESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKAD 92 (291)
T ss_pred cccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEecc
Confidence 3445556788999999999999999999864 68999999986432 2235677899999999 799999999998643
Q ss_pred ----CeeEEEEEEccCCChhHHHhc---CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEE
Q 001544 838 ----DFKALILEYMRNGSLEKCLYS---GNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHL 910 (1057)
Q Consensus 838 ----~~~~lV~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 910 (1057)
+..++||||+++++|.++++. ....+++..+..++.|++.|++||| +.+++||||||+||++++++.+||
T Consensus 93 ~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~nili~~~~~~kl 169 (291)
T cd06639 93 KLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKGNNILLTTEGGVKL 169 (291)
T ss_pred ccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEE
Confidence 368999999999999998753 3346899999999999999999999 899999999999999999999999
Q ss_pred EcccccccccCCCCccccccccccccccCccccCCC-----CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhh
Q 001544 911 SDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREG-----RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWV 985 (1057)
Q Consensus 911 ~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-----~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~ 985 (1057)
+|||.+....... .......++..|+|||.+... .++.++||||+||++|||++|+.||......+. ...+.
T Consensus 170 ~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~-~~~~~ 246 (291)
T cd06639 170 VDFGVSAQLTSTR--LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT-LFKIP 246 (291)
T ss_pred eecccchhccccc--ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH-HHHHh
Confidence 9999988653221 122234678899999987543 368899999999999999999999865321110 11100
Q ss_pred hhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 986 NDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.. ........+.....+.+++.+||+.+|++||++.|+++|
T Consensus 247 ~~-----------------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 247 RN-----------------PPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred cC-----------------CCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 00 000011112345678999999999999999999999876
No 276
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.9e-35 Score=321.35 Aligned_cols=246 Identities=26% Similarity=0.421 Sum_probs=196.0
Q ss_pred CCCceeccccCeEEEEEEec-CCcEEEEEEeec----cchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCe--eEEEE
Q 001544 772 SENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDL----QHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDF--KALIL 844 (1057)
Q Consensus 772 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~----~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~lV~ 844 (1057)
+...+||+|+|-+||||.+. +|..||.-.++. ......++|..|+++|+.++||||++++.+|.+... ..+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 34578999999999999765 688888755532 234556899999999999999999999999987655 66899
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC-CCCcEEEEcccccccccCCC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~-~~~~~kl~Dfg~a~~~~~~~ 923 (1057)
|.+..|+|..+..+.+. .+....+.|++||++||.|||.. .++|+|||||.+|||++ ..|.|||+|.|+|+.+.
T Consensus 123 EL~TSGtLr~Y~kk~~~-vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r--- 197 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKHRR-VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLR--- 197 (632)
T ss_pred ecccCCcHHHHHHHhcc-CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhh---
Confidence 99999999999887664 88889999999999999999954 68999999999999997 67999999999999863
Q ss_pred CccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccccc
Q 001544 924 QSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLI 1003 (1057)
Q Consensus 924 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1057)
.......+|||.|||||... ..|++.+||||||++++||+|+.+||.+=.....-+..-.....|....++
T Consensus 198 -~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV------- 268 (632)
T KOG0584|consen 198 -KSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKV------- 268 (632)
T ss_pred -ccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhcc-------
Confidence 22333478999999999876 789999999999999999999999986521111111111111111111111
Q ss_pred ccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1004 TEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1004 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
-.+++++||.+|+.. ..+|||+.|++++
T Consensus 269 -----------~dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 269 -----------KDPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred -----------CCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 135788999999999 8999999999875
No 277
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.8e-34 Score=317.70 Aligned_cols=248 Identities=27% Similarity=0.356 Sum_probs=200.0
Q ss_pred CCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccC
Q 001544 771 FSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRN 849 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 849 (1057)
|.....||+|+||.||+|... ++..||||.+........+.+.+|+.++++++||||+++++++..++..++||||+++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 333467999999999999864 6899999998766556667889999999999999999999999999999999999999
Q ss_pred CChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccc
Q 001544 850 GSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQT 929 (1057)
Q Consensus 850 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 929 (1057)
++|.+++... .+++.++..++.||+.|++||| +.+|+||||||+||++++++.++|+|||++....... ....
T Consensus 104 ~~L~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~--~~~~ 176 (292)
T cd06658 104 GALTDIVTHT--RMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV--PKRK 176 (292)
T ss_pred CcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhccccc--ccCc
Confidence 9999988654 4889999999999999999999 8999999999999999999999999999987543221 1223
Q ss_pred cccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhh
Q 001544 930 QTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHF 1009 (1057)
Q Consensus 930 ~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1057)
...++..|+|||...+..++.++||||+|+++|||++|+.||...... . ....+..... ...
T Consensus 177 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~----~----------~~~~~~~~~~----~~~ 238 (292)
T cd06658 177 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL----Q----------AMRRIRDNLP----PRV 238 (292)
T ss_pred eeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----H----------HHHHHHhcCC----Ccc
Confidence 346788999999998888999999999999999999999998642110 0 0000000000 001
Q ss_pred HHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1010 AAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
......+..+.+++.+|+..||.+|||+.|++++
T Consensus 239 ~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 239 KDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred ccccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 1112345678899999999999999999999986
No 278
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=4e-34 Score=310.25 Aligned_cols=246 Identities=28% Similarity=0.489 Sum_probs=198.2
Q ss_pred CCCCCCceeccccCeEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEcc
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMR 848 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 848 (1057)
++|++.+.||+|+||.||+|.. +++.||+|.++... ....+.+|+.++++++|||++++++++... ..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 3588889999999999999975 57889999986543 236788999999999999999999998654 4689999999
Q ss_pred CCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccc
Q 001544 849 NGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT 927 (1057)
Q Consensus 849 ~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 927 (1057)
+++|.+++.... ..+++.++..++.|+++|++||| +.+++||||||+||+++.++.+||+|||.+......
T Consensus 82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~----- 153 (254)
T cd05083 82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG----- 153 (254)
T ss_pred CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCccceecccc-----
Confidence 999999987654 45889999999999999999999 999999999999999999999999999998754211
Q ss_pred cccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhHHHhhhcccccccc
Q 001544 928 QTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITED 1006 (1057)
Q Consensus 928 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1057)
......+..|+|||.+.++.++.++|+||+|+++|||++ |+.||...... . ..+.+....
T Consensus 154 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-----~---------~~~~~~~~~----- 214 (254)
T cd05083 154 VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK-----E---------VKECVEKGY----- 214 (254)
T ss_pred CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH-----H---------HHHHHhCCC-----
Confidence 112234567999999988899999999999999999998 89888652111 1 111111111
Q ss_pred hhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHH
Q 001544 1007 KHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLK 1046 (1057)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1046 (1057)
.......++.++.+++.+||+.+|++||++.++++.+++
T Consensus 215 -~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 215 -RMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred -CCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 011113456778999999999999999999999998764
No 279
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=3.8e-34 Score=316.42 Aligned_cols=268 Identities=24% Similarity=0.328 Sum_probs=202.2
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
++|+..++||+|+||.||+|..+ +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 36888899999999999999875 58999999885432 2234678889999999999999999999999999999999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
|++++++.++..... .+++.++..++.|+++|++||| +.+++||||+|+||++++++.++++|||++.......
T Consensus 81 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~-- 154 (286)
T cd07846 81 FVDHTVLDDLEKYPN-GLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG-- 154 (286)
T ss_pred cCCccHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc--
Confidence 999999988765543 4899999999999999999999 8999999999999999999999999999988653322
Q ss_pred cccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCccccccc--chhhhhhhccchhHHHhhh----
Q 001544 926 MTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEM--TLKHWVNDFLPISMMKIID---- 998 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---- 998 (1057)
.......++..|+|||+..+ ..++.++||||||+++|||++|+.||......+. ....+..... ....+..+
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 233 (286)
T cd07846 155 EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLI-PRHQEIFQKNPL 233 (286)
T ss_pred cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCc-hhhHHHhccchH
Confidence 22233457889999998765 4578899999999999999999998864221110 0000111100 00111110
Q ss_pred --cccccc---cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 999 --ANLLIT---EDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 999 --~~~~~~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
...... ........+.++..+.+++.+||+.+|++||++.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 234 FAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred hhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 000000 000111123456789999999999999999999999875
No 280
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=6.8e-34 Score=310.60 Aligned_cols=253 Identities=25% Similarity=0.335 Sum_probs=204.8
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
+|+..+.||+|+||.||+|... +++.||+|++.... ....+++.+|++++++++||||+++++++..+...++|+||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5777899999999999999876 68999999986553 345577889999999999999999999999999999999999
Q ss_pred cCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCC-CCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 848 RNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYS-APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 848 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
++++|.+++......+++..+..++.|++.|++|+| + .+++||||||+||++++++.++|+|||.+.......
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~--- 155 (265)
T cd06605 82 DGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL--- 155 (265)
T ss_pred CCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHH---
Confidence 999999999876567899999999999999999999 8 999999999999999999999999999987652211
Q ss_pred ccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccc
Q 001544 927 TQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITED 1006 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1057)
.....++..|+|||...+..++.++||||+|+++|+|++|+.||.............. ....... .
T Consensus 156 -~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~--------~~~~~~~----~- 221 (265)
T cd06605 156 -AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELL--------QYIVNEP----P- 221 (265)
T ss_pred -hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHH--------HHHhcCC----C-
Confidence 1115678899999999888999999999999999999999999865322111111110 0111100 0
Q ss_pred hhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1007 KHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
...+ ...++.++.+++.+||..+|++||++.|++++
T Consensus 222 ~~~~-~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 222 PRLP-SGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred CCCC-hhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 0000 01156779999999999999999999999876
No 281
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1e-33 Score=309.85 Aligned_cols=251 Identities=22% Similarity=0.379 Sum_probs=200.4
Q ss_pred CCCCCceeccccCeEEEEEEecC--CcEEEEEEeecc----------chhHHHHHHHHHHHHHh-cCCCCceeEeeeecc
Q 001544 770 GFSENNLIGRGSFGSVYIARLQN--GIEVAVKTFDLQ----------HERAFKSFDTECEVMKS-IRHRNLTKIISSCSN 836 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~----------~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~ 836 (1057)
+|++.+.||+|+||.||+|.... ++.+|||.+... ......++.+|++++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788999999999999998764 788999988532 22344567788888865 799999999999999
Q ss_pred CCeeEEEEEEccCCChhHHHhc---CCccCCHHHHHHHHHHHHHHHHHHHhCCC-CCeEEccCCCCCeeeCCCCcEEEEc
Q 001544 837 EDFKALILEYMRNGSLEKCLYS---GNYILDIFQRLNIMIDVASALEYLHFGYS-APVIHCDLKPSNVLLDDNMVAHLSD 912 (1057)
Q Consensus 837 ~~~~~lV~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~Dlkp~Nill~~~~~~kl~D 912 (1057)
++..++||||+++++|.+++.. ....+++..+++++.|++.|++||| + .+++||||+|+||+++.++.+|++|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLH---KEKRIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhc---cCCceeecCCCHHHEEECCCCcEEEec
Confidence 9999999999999999988743 3456899999999999999999999 5 6799999999999999999999999
Q ss_pred ccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchh
Q 001544 913 FGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPIS 992 (1057)
Q Consensus 913 fg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 992 (1057)
||.+....... ......++..|+|||...+..++.++||||||+++|||++|+.||...... ..
T Consensus 158 fg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~-----~~-------- 221 (269)
T cd08528 158 FGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML-----SL-------- 221 (269)
T ss_pred ccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH-----HH--------
Confidence 99998653222 334456788999999998888999999999999999999999998642111 00
Q ss_pred HHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHH
Q 001544 993 MMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLL 1045 (1057)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1045 (1057)
.....+..... .....++.++.+++.+||+.||++||++.|+.++++
T Consensus 222 ~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 222 ATKIVEAVYEP------LPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred HHHHhhccCCc------CCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 00111110000 001134567899999999999999999999999875
No 282
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.2e-33 Score=309.02 Aligned_cols=257 Identities=26% Similarity=0.352 Sum_probs=205.7
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
++|++.+.||+|+||+||+|... ++..||+|++.... ....+.+.+|+++++.++|+|++++++.+..++..++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 46888999999999999999854 68899999986433 33567899999999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCC--ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 847 MRNGSLEKCLYSGN--YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
+++++|.+++.... ..+++..+..++.|++.|++||| +.+++||||+|+||++++++.++++|||++..+.....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 99999999987642 46899999999999999999999 99999999999999999999999999999977643322
Q ss_pred cc--ccccccccccccCccccCCC-CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccc
Q 001544 925 SM--TQTQTLATLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANL 1001 (1057)
Q Consensus 925 ~~--~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1057)
.. ......++..|+|||.+... .++.++|+|||||++|||++|+.||......+. ...+.. ...
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~-~~~~~~------------~~~ 224 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV-LMLTLQ------------NDP 224 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh-HHHHhc------------CCC
Confidence 21 22334578899999988766 789999999999999999999999875322111 111100 000
Q ss_pred ccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1002 LITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1002 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
. ..........+++++.+++.+|+..||++||++.|+++|
T Consensus 225 ~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 225 P--SLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred C--CcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0 000000113456788999999999999999999999875
No 283
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=8.7e-34 Score=308.63 Aligned_cols=237 Identities=24% Similarity=0.438 Sum_probs=189.4
Q ss_pred ceeccccCeEEEEEEecC-C----------cEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEE
Q 001544 775 NLIGRGSFGSVYIARLQN-G----------IEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALI 843 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~~-~----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 843 (1057)
+.||+|+||.||+|...+ + ..|++|++...... ...+.+|+.++++++||||+++++++.. +..++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 469999999999998764 3 25788887654433 6788999999999999999999999887 778999
Q ss_pred EEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC-------cEEEEccccc
Q 001544 844 LEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM-------VAHLSDFGIA 916 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~-------~~kl~Dfg~a 916 (1057)
|||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+|++|||++
T Consensus 79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a 155 (259)
T cd05037 79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP 155 (259)
T ss_pred EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---hCCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence 9999999999999876657899999999999999999999 99999999999999999888 7999999999
Q ss_pred ccccCCCCccccccccccccccCccccCCC--CCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchhH
Q 001544 917 KLLIGEDQSMTQTQTLATLGYMAPEYGREG--RVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPISM 993 (1057)
Q Consensus 917 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 993 (1057)
..... .....++..|+|||++... .++.++||||+|+++||+++ |..||...... ....+..
T Consensus 156 ~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~--~~~~~~~------- 220 (259)
T cd05037 156 ITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS--EKERFYQ------- 220 (259)
T ss_pred ccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch--hHHHHHh-------
Confidence 86532 2233456789999998776 78999999999999999999 46676553211 0000000
Q ss_pred HHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 994 MKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 994 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
..... .. .....+.+++.+||..+|++||++.|+++.|
T Consensus 221 ----~~~~~--~~-------~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 221 ----DQHRL--PM-------PDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred ----cCCCC--CC-------CCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 00000 00 0015788999999999999999999999876
No 284
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=7.7e-34 Score=311.68 Aligned_cols=254 Identities=27% Similarity=0.459 Sum_probs=197.9
Q ss_pred CCCCceeccccCeEEEEEEec----CCcEEEEEEeecc--chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCC------
Q 001544 771 FSENNLIGRGSFGSVYIARLQ----NGIEVAVKTFDLQ--HERAFKSFDTECEVMKSIRHRNLTKIISSCSNED------ 838 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 838 (1057)
|++.++||+|+||+||+|... +++.||||++... .....+++.+|++++++++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 566789999999999999753 4689999998644 3345677889999999999999999999875432
Q ss_pred eeEEEEEEccCCChhHHHhcC-----CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcc
Q 001544 839 FKALILEYMRNGSLEKCLYSG-----NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDF 913 (1057)
Q Consensus 839 ~~~lV~E~~~~gsL~~~l~~~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 913 (1057)
..++++||+++|+|.+++... ...+++..+.+++.|++.|++||| +.+|+||||||+||+++.++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEECcc
Confidence 347899999999998887432 134788999999999999999999 899999999999999999999999999
Q ss_pred cccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhhccchh
Q 001544 914 GIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVNDFLPIS 992 (1057)
Q Consensus 914 g~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 992 (1057)
|.++...............++..|++||......++.++||||||+++|||++ |+.||...... ....+..
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~--~~~~~~~------ 229 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS--EIYNYLI------ 229 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH--HHHHHHH------
Confidence 99986533222222223345568999999988889999999999999999999 88887642111 1111110
Q ss_pred HHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHh
Q 001544 993 MMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKI 1047 (1057)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 1047 (1057)
.... ......++..+.+++.+|++.+|++||++.|+++.|+++
T Consensus 230 -----~~~~-------~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 230 -----KGNR-------LKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred -----cCCc-------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0000 001123456789999999999999999999999999875
No 285
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=4.4e-34 Score=316.97 Aligned_cols=246 Identities=26% Similarity=0.348 Sum_probs=198.8
Q ss_pred CCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCCC
Q 001544 773 ENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNGS 851 (1057)
Q Consensus 773 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gs 851 (1057)
....||+|+||.||+|... +++.||+|++........+.+.+|+.+++.++|||++++++++..++..++|+||+++++
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~ 104 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA 104 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence 3457999999999999864 689999999865544455678899999999999999999999999999999999999999
Q ss_pred hhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccccc
Q 001544 852 LEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQT 931 (1057)
Q Consensus 852 L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 931 (1057)
|.+++... .+++.++..++.|++.|++||| +.+++||||||+||+++.++.+||+|||++....... ......
T Consensus 105 L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~--~~~~~~ 177 (297)
T cd06659 105 LTDIVSQT--RLNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV--PKRKSL 177 (297)
T ss_pred HHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHhhccccc--ccccce
Confidence 99877553 4889999999999999999999 9999999999999999999999999999987542221 122335
Q ss_pred cccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHH
Q 001544 932 LATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAA 1011 (1057)
Q Consensus 932 ~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1057)
.++..|+|||++.+..++.++|||||||++|||++|+.||......+ .. ..+.... ......
T Consensus 178 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-~~-------------~~~~~~~----~~~~~~ 239 (297)
T cd06659 178 VGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ-AM-------------KRLRDSP----PPKLKN 239 (297)
T ss_pred ecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HH-------------HHHhccC----CCCccc
Confidence 68889999999988889999999999999999999999986421110 00 0000000 000111
Q ss_pred HHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1012 KEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1012 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
....+.++.+++.+|++.+|++||++.|++++
T Consensus 240 ~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 240 AHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred cCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 12345678899999999999999999999986
No 286
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1e-33 Score=313.74 Aligned_cols=271 Identities=21% Similarity=0.307 Sum_probs=199.5
Q ss_pred HhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
++++|.+.+.||+|+||.||+|... +|+.||+|++.... ......+.+|++++++++|+||+++++++.+++..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 4578999999999999999999754 68999999986543 222346778999999999999999999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
||+. +++.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 157 (291)
T cd07870 83 EYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS- 157 (291)
T ss_pred eccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEeccccccccCCCC-
Confidence 9996 6777777655556788889999999999999999 8999999999999999999999999999987542211
Q ss_pred ccccccccccccccCccccCCC-CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhh-hhhhccchh-HHH-h----
Q 001544 925 SMTQTQTLATLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKH-WVNDFLPIS-MMK-I---- 996 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~-~~~~~~~~~-~~~-~---- 996 (1057)
.......++..|+|||.+.+. .++.++||||+||++|||++|+.||.........+.. |.....+.. ... .
T Consensus 158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07870 158 -QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLP 236 (291)
T ss_pred -CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcc
Confidence 122334568899999988654 5788999999999999999999999753322111111 110000000 000 0
Q ss_pred --hhcccccccchhhHH---HHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 997 --IDANLLITEDKHFAA---KEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 997 --~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
............... ....+.++.+++.+|+..||++|||+.|++.|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 237 NYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred cccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 000000000000000 00124678899999999999999999999865
No 287
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.2e-33 Score=314.34 Aligned_cols=267 Identities=22% Similarity=0.301 Sum_probs=200.6
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccch-----hHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHE-----RAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALI 843 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 843 (1057)
+|+..+.||+|+||.||+|... +|+.||||+++.... .....+..|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4777889999999999999865 689999999965432 2345677899999999999999999999999999999
Q ss_pred EEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC
Q 001544 844 LEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 923 (1057)
|||+ +|+|.+++......+++..+..++.||++||+||| +.+|+||||||+||+++.++.++|+|||+++......
T Consensus 81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 156 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN 156 (298)
T ss_pred Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC
Confidence 9999 88999999776556999999999999999999999 9999999999999999999999999999998653321
Q ss_pred CccccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhcc---chhHHHhh--
Q 001544 924 QSMTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFL---PISMMKII-- 997 (1057)
Q Consensus 924 ~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~-- 997 (1057)
.......++..|+|||.+.+ ..++.++|||||||++|||++|.+||......+ .......... +.......
T Consensus 157 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 233 (298)
T cd07841 157 --RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID-QLGKIFEALGTPTEENWPGVTSL 233 (298)
T ss_pred --ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH-HHHHHHHHcCCCchhhhhhcccc
Confidence 12233356778999998754 457899999999999999999987775422111 1111100000 00000000
Q ss_pred -hccc--ccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 998 -DANL--LITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 998 -~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
+... ..............+.++.+++.+||+.+|++|||+.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 234 PDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000 000000011112346788999999999999999999999985
No 288
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.9e-33 Score=315.81 Aligned_cols=193 Identities=22% Similarity=0.316 Sum_probs=158.4
Q ss_pred ceeccccCeEEEEEEec---CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeec--cCCeeEEEEEEccC
Q 001544 775 NLIGRGSFGSVYIARLQ---NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCS--NEDFKALILEYMRN 849 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~lV~E~~~~ 849 (1057)
.+||+|+||+||+|+.. ++..||+|.++.... ...+.+|++++++++||||+++++++. .+...++||||+++
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI--SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH 84 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC--cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence 68999999999999864 457899999864432 245778999999999999999999884 45678999999875
Q ss_pred CChhHHHhcC--------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeee----CCCCcEEEEcccccc
Q 001544 850 GSLEKCLYSG--------NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL----DDNMVAHLSDFGIAK 917 (1057)
Q Consensus 850 gsL~~~l~~~--------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill----~~~~~~kl~Dfg~a~ 917 (1057)
+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 777766421 135888999999999999999999 9999999999999999 567899999999998
Q ss_pred cccCCCC-ccccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCc
Q 001544 918 LLIGEDQ-SMTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDE 973 (1057)
Q Consensus 918 ~~~~~~~-~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~ 973 (1057)
....... ........+|+.|+|||++.+ ..++.++||||+||++|||+||++||..
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred ccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 6533221 112234567899999998876 4578999999999999999999999864
No 289
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.3e-34 Score=326.66 Aligned_cols=241 Identities=23% Similarity=0.296 Sum_probs=187.2
Q ss_pred eccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhc---CCCCceeEeeeeccCCeeEEEEEEccC
Q 001544 777 IGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSI---RHRNLTKIISSCSNEDFKALILEYMRN 849 (1057)
Q Consensus 777 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lV~E~~~~ 849 (1057)
||+|+||+||+|+.. +++.||||++.... ......+..|..++.+. +||||+++++++.+.+..|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999865 68999999986432 12234455566776655 699999999999999999999999999
Q ss_pred CChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccc
Q 001544 850 GSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQT 929 (1057)
Q Consensus 850 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 929 (1057)
|+|.+++.... .+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++..... .....
T Consensus 81 g~L~~~l~~~~-~~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~--~~~~~ 154 (330)
T cd05586 81 GELFWHLQKEG-RFSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTD--NKTTN 154 (330)
T ss_pred ChHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCC--CCCcc
Confidence 99999887654 5899999999999999999999 999999999999999999999999999998753221 12223
Q ss_pred cccccccccCccccCCC-CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchh
Q 001544 930 QTLATLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKH 1008 (1057)
Q Consensus 930 ~~~~t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1057)
...||..|+|||++.+. .++.++||||+||++|||++|+.||...... . ....+..... .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~-----~---------~~~~i~~~~~-----~ 215 (330)
T cd05586 155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ-----Q---------MYRNIAFGKV-----R 215 (330)
T ss_pred CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHH-----H---------HHHHHHcCCC-----C
Confidence 45689999999988654 4789999999999999999999998652111 0 0000000000 0
Q ss_pred hHHHHHHHHHHHHHHhHcccCCCCCCC----CHHHHHHH
Q 001544 1009 FAAKEQCASSVFNLAMECTVESPDERI----TAKEIVRR 1043 (1057)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~Rp----s~~evl~~ 1043 (1057)
.+ ...++.++.+++.+||+.||++|| ++.|+++|
T Consensus 216 ~~-~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 216 FP-KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred CC-CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence 00 012456788999999999999998 56777664
No 290
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=8.2e-34 Score=314.53 Aligned_cols=270 Identities=22% Similarity=0.291 Sum_probs=199.3
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccch-hHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHE-RAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
.++|+..+.||+|++|.||+|... +++.||||.+..... .....+.+|++++++++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 357888999999999999999865 689999999864432 223456789999999999999999999999999999999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
|+++ +|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-- 157 (291)
T cd07844 84 YLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPS-- 157 (291)
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECccccccccCCCC--
Confidence 9985 999988776667899999999999999999999 9999999999999999999999999999987542111
Q ss_pred cccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhc--c-chhHHHhhhcc-
Q 001544 926 MTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDF--L-PISMMKIIDAN- 1000 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~- 1000 (1057)
.......++..|+|||+..+ ..++.++||||+|+++|||++|+.||................. . +.......+..
T Consensus 158 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (291)
T cd07844 158 KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPE 237 (291)
T ss_pred ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccc
Confidence 11222346788999998765 4578999999999999999999999865331111111000000 0 00000000000
Q ss_pred --cc----cccchhhHHHHHHH--HHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1001 --LL----ITEDKHFAAKEQCA--SSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1001 --~~----~~~~~~~~~~~~~~--~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.. .............. .++.+++.+|++.+|++||++.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 238 FKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred cccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 00 00000000001122 677899999999999999999999864
No 291
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1e-33 Score=307.48 Aligned_cols=248 Identities=23% Similarity=0.415 Sum_probs=201.0
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc--chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ--HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
+|+..+.||+|+||.||+|... +++.||||++... .......+.+|++++++++|||++++++.+..++..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4778899999999999999754 6899999998654 234467889999999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC-CcEEEEcccccccccCCCC
Q 001544 847 MRNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN-MVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~Dfg~a~~~~~~~~ 924 (1057)
+++++|.+++.... ..+++..+.+++.|+++|++||| +.+++||||+|+||+++++ +.+|++|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS- 156 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-
Confidence 99999999997653 45899999999999999999999 9999999999999999854 568999999998653221
Q ss_pred ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccc
Q 001544 925 SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLIT 1004 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1057)
......++..|+|||...+..++.++||||||+++|+|++|+.||...... .. .........
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-----~~--------~~~~~~~~~--- 218 (256)
T cd08220 157 --KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP-----AL--------VLKIMSGTF--- 218 (256)
T ss_pred --cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH-----HH--------HHHHHhcCC---
Confidence 222345788999999998888899999999999999999999998652111 00 001110000
Q ss_pred cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1005 EDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.+.+..++.++.+++.+||+.+|++|||+.|++++
T Consensus 219 ----~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 219 ----APISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred ----CCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 00112356778999999999999999999999875
No 292
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.3e-33 Score=308.87 Aligned_cols=254 Identities=24% Similarity=0.405 Sum_probs=202.2
Q ss_pred CCCCCceeccccCeEEEEEEe-cCCcEEEEEEeeccc------hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEE
Q 001544 770 GFSENNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQH------ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKAL 842 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 842 (1057)
+|+..+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477889999999999999975 578999999986432 2245788999999999999999999999999999999
Q ss_pred EEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC-cEEEEcccccccccC
Q 001544 843 ILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM-VAHLSDFGIAKLLIG 921 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfg~a~~~~~ 921 (1057)
||||+++++|.+++...+ .+++..+..++.|++.|++||| +.+++||||+|+||+++.++ .+||+|||.+..+..
T Consensus 81 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~ 156 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG-AFKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAA 156 (268)
T ss_pred EEeccCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccccccccccc
Confidence 999999999999987644 5889999999999999999999 99999999999999998776 699999999977643
Q ss_pred CCC--ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhc
Q 001544 922 EDQ--SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDA 999 (1057)
Q Consensus 922 ~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1057)
... ........++..|+|||...+..++.++||||+|+++||+++|..||........ ... .......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~--~~~--------~~~~~~~ 226 (268)
T cd06630 157 KGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH--LAL--------IFKIASA 226 (268)
T ss_pred ccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch--HHH--------HHHHhcc
Confidence 211 1112234578899999999888899999999999999999999999864211100 000 0000000
Q ss_pred ccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1000 NLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1000 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
......+...++++.+++.+|+..+|++||++.|++++
T Consensus 227 ------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 227 ------TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred ------CCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 00111223456788999999999999999999999865
No 293
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.5e-33 Score=311.40 Aligned_cols=267 Identities=25% Similarity=0.313 Sum_probs=199.1
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
+|+..+.||+|++|.||+|+.. +|+.||||+++... ......+.+|++++++++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4778899999999999999865 68999999986443 22346788999999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 847 MRNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
+. ++|.+++.... ..+++.++..++.|+++|++||| +.+++||||+|+||+++.++.+|++|||++...... .
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~--~ 154 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--V 154 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccC--c
Confidence 96 58888886543 46899999999999999999999 899999999999999999999999999998765221 1
Q ss_pred cccccccccccccCccccCCCC-CCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhcc-c-hhHHHhhh----
Q 001544 926 MTQTQTLATLGYMAPEYGREGR-VSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFL-P-ISMMKIID---- 998 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~~~-~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~---- 998 (1057)
.......++..|+|||...+.. ++.++||||||+++|||+||+.||......+ .......... + ........
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07860 155 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSLPD 233 (284)
T ss_pred cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCChhhhhhhhHHHH
Confidence 1223345678899999876644 5889999999999999999999986522111 1111111000 0 00000000
Q ss_pred ---cccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 999 ---ANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 999 ---~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
..............+.++.++.+++.+|++.||++||+++|+++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 234 YKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 000000000001112345778899999999999999999999875
No 294
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.8e-33 Score=309.29 Aligned_cols=247 Identities=29% Similarity=0.409 Sum_probs=201.3
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
-|+..+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 3667789999999999999764 68999999986433 344567889999999999999999999999999999999999
Q ss_pred cCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccc
Q 001544 848 RNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT 927 (1057)
Q Consensus 848 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 927 (1057)
++++|.+++... .+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.++++|||++....... ..
T Consensus 85 ~~~~l~~~i~~~--~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~--~~ 157 (277)
T cd06641 85 GGGSALDLLEPG--PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IK 157 (277)
T ss_pred CCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecccceecccch--hh
Confidence 999999988654 4889999999999999999999 9999999999999999999999999999987653221 12
Q ss_pred cccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccch
Q 001544 928 QTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDK 1007 (1057)
Q Consensus 928 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1057)
.....++..|+|||...+..++.++|+||+||++|||++|..||...... .+. ..+....
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-----~~~---------~~~~~~~------ 217 (277)
T cd06641 158 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM-----KVL---------FLIPKNN------ 217 (277)
T ss_pred hccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH-----HHH---------HHHhcCC------
Confidence 22345788999999998888999999999999999999999998652111 000 0000000
Q ss_pred hhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1008 HFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.......++.++.+++.+|++.+|++||++.++++|
T Consensus 218 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 218 PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 001112356778899999999999999999999996
No 295
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=2.8e-33 Score=305.56 Aligned_cols=253 Identities=29% Similarity=0.449 Sum_probs=203.4
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccch--hHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHE--RAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
+|+..+.||+|+||.||+|... +++.||+|+++.... ...+.+.+|++++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 4778899999999999999854 689999999875543 3678899999999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 847 MRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
+++++|.+++.... .+++..+..++.|+++|++||| +.+|+||||+|+||++++++.+||+|||.+..........
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~ 156 (264)
T cd06626 81 CSGGTLEELLEHGR-ILDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM 156 (264)
T ss_pred CCCCcHHHHHhhcC-CCChHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc
Confidence 99999999987654 4788999999999999999999 9999999999999999999999999999998764332211
Q ss_pred c--cccccccccccCccccCCCC---CCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccc
Q 001544 927 T--QTQTLATLGYMAPEYGREGR---VSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANL 1001 (1057)
Q Consensus 927 ~--~~~~~~t~~y~aPE~~~~~~---~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1057)
. .....++..|+|||++.+.. .+.++||||||+++||+++|+.||...... .........
T Consensus 157 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~-~~~~~~~~~-------------- 221 (264)
T cd06626 157 GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE-FQIMFHVGA-------------- 221 (264)
T ss_pred cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch-HHHHHHHhc--------------
Confidence 1 11345778999999987766 889999999999999999999998652211 000000000
Q ss_pred ccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1002 LITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1002 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
......+....++..+.+++.+|++.+|++||++.|++.+
T Consensus 222 --~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 222 --GHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred --CCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000111122346678899999999999999999999864
No 296
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.2e-33 Score=308.93 Aligned_cols=256 Identities=25% Similarity=0.314 Sum_probs=200.3
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccch-hHHHHHHHHHHHHHhcCCCCceeEeeeecc--CCeeEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHE-RAFKSFDTECEVMKSIRHRNLTKIISSCSN--EDFKALIL 844 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lV~ 844 (1057)
++|+..+.||.|++|.||+|... +++.||+|.+..... ....++.+|++++++++||||++++++|.+ .+..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 36778899999999999999875 689999999865432 345778999999999999999999998854 34789999
Q ss_pred EEccCCChhHHHhc---CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccC
Q 001544 845 EYMRNGSLEKCLYS---GNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIG 921 (1057)
Q Consensus 845 E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 921 (1057)
||+++++|.+++.. ....+++..+..++.|+++||+||| +.+++||||+|+||+++.++.++++|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 99999999887653 3345889999999999999999999 99999999999999999999999999999875422
Q ss_pred CCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccc---cchhhhhhhccchhHHHhhh
Q 001544 922 EDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGE---MTLKHWVNDFLPISMMKIID 998 (1057)
Q Consensus 922 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 998 (1057)
. ......++..|+|||...+..++.++||||+|+++|||++|+.||....... .....|........
T Consensus 158 ~----~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~------ 227 (287)
T cd06621 158 S----LAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPE------ 227 (287)
T ss_pred c----ccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchh------
Confidence 1 1123356788999999988899999999999999999999999987642211 11111111100000
Q ss_pred cccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 999 ANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
. ..........++++.+++.+||+.+|++|||+.|++++
T Consensus 228 --~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 228 --L----KDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred --h----ccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 0 00000001235678999999999999999999999985
No 297
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=2.4e-33 Score=313.08 Aligned_cols=248 Identities=27% Similarity=0.373 Sum_probs=198.5
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc---chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ---HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALI 843 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 843 (1057)
...|+..+.||+|+||+||+|... +++.||+|++... .....+++.+|+++++.++||||+++++++.+++..++|
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 345888899999999999999865 6899999998533 233456788999999999999999999999999999999
Q ss_pred EEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC
Q 001544 844 LEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 923 (1057)
|||++ |++.+.+......+++.++..++.|++.|+.||| +.+|+||||+|+||++++++.++|+|||++......
T Consensus 94 ~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~- 168 (307)
T cd06607 94 MEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA- 168 (307)
T ss_pred HHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEECCCCCEEEeecCcceecCCC-
Confidence 99997 5777777655556999999999999999999999 999999999999999999999999999998754221
Q ss_pred CccccccccccccccCccccC---CCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcc
Q 001544 924 QSMTQTQTLATLGYMAPEYGR---EGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDAN 1000 (1057)
Q Consensus 924 ~~~~~~~~~~t~~y~aPE~~~---~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1057)
....++..|+|||++. ...++.++||||||+++|||++|+.||........ ........
T Consensus 169 -----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~-------------~~~~~~~~ 230 (307)
T cd06607 169 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-------------LYHIAQND 230 (307)
T ss_pred -----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH-------------HHHHhcCC
Confidence 2345778899999874 45688999999999999999999999864211100 00000000
Q ss_pred cccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 1001 LLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
. .......++.++.+++.+||+.+|++||++.+++++.
T Consensus 231 ~------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 268 (307)
T cd06607 231 S------PTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHR 268 (307)
T ss_pred C------CCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 0 0001123566799999999999999999999999864
No 298
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2e-33 Score=309.97 Aligned_cols=248 Identities=27% Similarity=0.348 Sum_probs=200.5
Q ss_pred CCCCceeccccCeEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccC
Q 001544 771 FSENNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRN 849 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 849 (1057)
|...+.||+|++|.||+|.. .+++.||+|+++.......+.+.+|+.++++++|||++++++++...+..++|+||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 44568999999999999985 46899999998765555566788999999999999999999999999999999999999
Q ss_pred CChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccc
Q 001544 850 GSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQT 929 (1057)
Q Consensus 850 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 929 (1057)
++|.+++.. ..+++.++..++.|++.|++||| +.+++||||+|+||+++.++.++++|||.+....... ....
T Consensus 101 ~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~--~~~~ 173 (285)
T cd06648 101 GALTDIVTH--TRMNEEQIATVCLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV--PRRK 173 (285)
T ss_pred CCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccccchhhccCC--cccc
Confidence 999999877 34899999999999999999999 9999999999999999999999999999887542211 1222
Q ss_pred cccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhh
Q 001544 930 QTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHF 1009 (1057)
Q Consensus 930 ~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1057)
...++..|+|||...+..++.++||||+|+++|||++|+.||..... .... ..+.... ....
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~-----~~~~---------~~~~~~~----~~~~ 235 (285)
T cd06648 174 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP-----LQAM---------KRIRDNL----PPKL 235 (285)
T ss_pred cccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH-----HHHH---------HHHHhcC----CCCC
Confidence 34578899999999888899999999999999999999999854111 0000 0000000 0001
Q ss_pred HHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1010 AAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.....++..+.+++.+||+.+|++||++.|++++
T Consensus 236 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 236 KNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred cccccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 1112256779999999999999999999999974
No 299
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2.2e-33 Score=310.26 Aligned_cols=254 Identities=28% Similarity=0.367 Sum_probs=207.3
Q ss_pred HhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
..+.|+..+.||+|++|.||+|..+ ++..||+|++..... ..+.+.+|++.+++++|+|++++++++...+..++|+|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 4556888899999999999999876 689999999976554 45778899999999999999999999999999999999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
|+++++|.+++......+++.++..++.|++.|++||| +.+++|+||+|+||+++.++.++|+|||.+.......
T Consensus 96 ~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~-- 170 (286)
T cd06614 96 YMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK-- 170 (286)
T ss_pred ccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEECccchhhhhccch--
Confidence 99999999999876556999999999999999999999 8999999999999999999999999999987653221
Q ss_pred cccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccccccc
Q 001544 926 MTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITE 1005 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1057)
.......++..|+|||...+..++.++||||||+++|||++|+.||....... ... ......
T Consensus 171 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~-~~~------------~~~~~~----- 232 (286)
T cd06614 171 SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR-ALF------------LITTKG----- 232 (286)
T ss_pred hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH-HHH------------HHHhcC-----
Confidence 12223346789999999988889999999999999999999999986421110 000 000000
Q ss_pred chhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 1006 DKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
.........++.++.+++.+|++.+|.+||++.+++++-
T Consensus 233 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 271 (286)
T cd06614 233 IPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHP 271 (286)
T ss_pred CCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhCh
Confidence 001111233567899999999999999999999998754
No 300
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.7e-33 Score=309.35 Aligned_cols=253 Identities=25% Similarity=0.357 Sum_probs=200.8
Q ss_pred HhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhc-CCCCceeEeeeeccC------C
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSI-RHRNLTKIISSCSNE------D 838 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~------~ 838 (1057)
.+++|++.+.||+|++|.||+|... +++.||+|++..... ..+++.+|+++++++ +|+||+++++++.+. +
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 4678999999999999999999875 678999999875543 346789999999999 699999999998653 4
Q ss_pred eeEEEEEEccCCChhHHHhcC---CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccc
Q 001544 839 FKALILEYMRNGSLEKCLYSG---NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGI 915 (1057)
Q Consensus 839 ~~~lV~E~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 915 (1057)
..++||||+++++|.+++... +..+++..+..++.|+++|++||| +.+++||||+|+||++++++.+|++|||.
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~l~d~~~ 159 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVDFGV 159 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEEECCCcc
Confidence 589999999999999987653 356899999999999999999999 99999999999999999999999999999
Q ss_pred cccccCCCCccccccccccccccCccccCC-----CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccc
Q 001544 916 AKLLIGEDQSMTQTQTLATLGYMAPEYGRE-----GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLP 990 (1057)
Q Consensus 916 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 990 (1057)
+...... ........++..|+|||++.. ..++.++||||+|+++|||++|+.||......+ ...
T Consensus 160 ~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~-------- 228 (275)
T cd06608 160 SAQLDST--LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR-ALF-------- 228 (275)
T ss_pred ceecccc--hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH-HHH--------
Confidence 8765321 122233457889999998643 346789999999999999999999986421111 011
Q ss_pred hhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 991 ISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
..... ..........++.++.+++.+||..||++|||+.|++++
T Consensus 229 ----~~~~~-----~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 229 ----KIPRN-----PPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred ----Hhhcc-----CCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 11000 000111123356788999999999999999999999874
No 301
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=2.1e-34 Score=289.40 Aligned_cols=274 Identities=22% Similarity=0.288 Sum_probs=199.8
Q ss_pred HhCCCCCCceeccccCeEEEEEEec---C--CcEEEEEEeeccch--hHHHHHHHHHHHHHhcCCCCceeEeeeecc-CC
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARLQ---N--GIEVAVKTFDLQHE--RAFKSFDTECEVMKSIRHRNLTKIISSCSN-ED 838 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~~---~--~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 838 (1057)
....|+....||+|.||.||+|.-. + ...+|+|.++.+.+ ......-+|+.+++.++|||++.+...+-. +.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 3456888999999999999999532 2 23799999976532 334556789999999999999999999877 78
Q ss_pred eeEEEEEEccCCChhHHHhcCC----ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC----CcEEE
Q 001544 839 FKALILEYMRNGSLEKCLYSGN----YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN----MVAHL 910 (1057)
Q Consensus 839 ~~~lV~E~~~~gsL~~~l~~~~----~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~----~~~kl 910 (1057)
..++++||++. +|.+.++-.+ +.++...+..|+.||+.|+.||| +.-|+|||+||.||++..+ |.+||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh---hhheeeccCCcceEEEeccCCccCeeEe
Confidence 88999999988 8888876433 56888999999999999999999 8999999999999999877 99999
Q ss_pred EcccccccccCCCCc-cccccccccccccCccccCCCC-CCccchHHHHHHHHHHHhhCCCCCCccccc-----------
Q 001544 911 SDFGIAKLLIGEDQS-MTQTQTLATLGYMAPEYGREGR-VSTKGDVYSFGILLMETFTRRKPTDEIFSG----------- 977 (1057)
Q Consensus 911 ~Dfg~a~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~-~~~~~Dv~s~G~il~elltg~~p~~~~~~~----------- 977 (1057)
+|||+++.+...-.. ......+.|.+|+|||.+.+.+ ||++.|||+.||++.||+|-.+-|......
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQ 257 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQ 257 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHH
Confidence 999999987543222 2445567899999999988764 789999999999999999988766431100
Q ss_pred ---------ccchhhhhhhcc-ch--hHHHhhhcccccc--cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 978 ---------EMTLKHWVNDFL-PI--SMMKIIDANLLIT--EDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 978 ---------~~~~~~~~~~~~-~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
..+...|-.... |+ .....+....... -.........-++...+++.+++.+||.+|.|+++++++
T Consensus 258 l~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh 337 (438)
T KOG0666|consen 258 LDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEH 337 (438)
T ss_pred HHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcc
Confidence 000111211100 00 0001111000000 000111111123447899999999999999999999987
Q ss_pred H
Q 001544 1044 L 1044 (1057)
Q Consensus 1044 L 1044 (1057)
.
T Consensus 338 ~ 338 (438)
T KOG0666|consen 338 P 338 (438)
T ss_pred c
Confidence 5
No 302
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=2.3e-33 Score=306.23 Aligned_cols=252 Identities=25% Similarity=0.346 Sum_probs=206.7
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccch-hHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHE-RAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
++|++.+.||+|++|.||+|+.. +++.||||++..... .....+.+|++.+++++|+|++++++++..++..++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36788899999999999999876 599999999876543 4567899999999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCC-CCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 847 MRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYS-APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
+++++|.+++... ..+++..+..++.|+++|++||| + .+++||||+|+||+++.++.++++|||.+........
T Consensus 81 ~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~- 155 (264)
T cd06623 81 MDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD- 155 (264)
T ss_pred cCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCC-
Confidence 9999999998765 45899999999999999999999 8 9999999999999999999999999999986632221
Q ss_pred cccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccccccc
Q 001544 926 MTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITE 1005 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1057)
......++..|+|||...+..++.++|+||||+++|||++|+.||...... ...+. ...+.....
T Consensus 156 -~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--~~~~~--------~~~~~~~~~---- 220 (264)
T cd06623 156 -QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP--SFFEL--------MQAICDGPP---- 220 (264)
T ss_pred -cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc--CHHHH--------HHHHhcCCC----
Confidence 112345788999999998888999999999999999999999998764321 00000 001110000
Q ss_pred chhhHHHHH-HHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1006 DKHFAAKEQ-CASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1006 ~~~~~~~~~-~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
...... ++..+.+++.+|++.+|++||++.|++++
T Consensus 221 ---~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 221 ---PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred ---CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 011122 56789999999999999999999999986
No 303
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.4e-33 Score=306.24 Aligned_cols=252 Identities=23% Similarity=0.331 Sum_probs=202.2
Q ss_pred CCCCCceeccccCeEEEEEEe-cCCcEEEEEEeecc--chhHHHHHHHHHHHHHhcCCCCceeEeeeecc--CCeeEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQ--HERAFKSFDTECEVMKSIRHRNLTKIISSCSN--EDFKALIL 844 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lV~ 844 (1057)
+|++.+.||+|+||.||+|.. .+++.||+|++... .....+++..|++++++++||||+++++++.. +...++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 477889999999999999975 46889999998643 33445778899999999999999999997753 45678999
Q ss_pred EEccCCChhHHHhcC---CccCCHHHHHHHHHHHHHHHHHHHhCC--CCCeEEccCCCCCeeeCCCCcEEEEcccccccc
Q 001544 845 EYMRNGSLEKCLYSG---NYILDIFQRLNIMIDVASALEYLHFGY--SAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 919 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~--~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 919 (1057)
||+++++|.+++... ...+++.+++.++.|+++|++|||..+ +.+++||||||+||+++.++.+|++|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999998653 356899999999999999999999543 678999999999999999999999999999875
Q ss_pred cCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhc
Q 001544 920 IGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDA 999 (1057)
Q Consensus 920 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1057)
.... .......++..|+|||.+....++.++|+||+|+++|+|++|+.||...... ... +.+..
T Consensus 161 ~~~~--~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~------------~~~~~ 224 (265)
T cd08217 161 GHDS--SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL--QLA------------SKIKE 224 (265)
T ss_pred cCCc--ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH--HHH------------HHHhc
Confidence 3222 1123346788999999998888999999999999999999999998753211 111 11111
Q ss_pred ccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1000 NLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1000 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
... ...+...+.++.+++.+|++.+|++||++.|++++
T Consensus 225 ~~~------~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 225 GKF------RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred CCC------CCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 000 01123456788999999999999999999999975
No 304
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=4e-33 Score=301.92 Aligned_cols=250 Identities=29% Similarity=0.433 Sum_probs=205.9
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEcc
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMR 848 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 848 (1057)
+|+..+.||+|++|.||+|... +++.|++|++........+.+.+|++.+++++||+++++++++......++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 4777899999999999999875 689999999976655566889999999999999999999999999999999999999
Q ss_pred CCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcccc
Q 001544 849 NGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQ 928 (1057)
Q Consensus 849 ~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 928 (1057)
+++|.+++......+++..+..++.|+++|++||| +.+++||||+|+||++++++.++|+|||.+........ .
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---~ 154 (253)
T cd05122 81 GGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA---R 154 (253)
T ss_pred CCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeecccccccccccc---c
Confidence 99999998876567999999999999999999999 89999999999999999999999999999986533221 2
Q ss_pred ccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchh
Q 001544 929 TQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKH 1008 (1057)
Q Consensus 929 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1057)
....++..|+|||......++.++||||+|+++|+|++|+.||........ ... .... ....
T Consensus 155 ~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-------------~~~-~~~~----~~~~ 216 (253)
T cd05122 155 NTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKA-------------LFK-IATN----GPPG 216 (253)
T ss_pred cceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHH-------------HHH-HHhc----CCCC
Confidence 345678899999999888899999999999999999999999865211000 000 0000 0000
Q ss_pred hHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1009 FAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
......++..+.+++.+|+..||++|||+.|+++|
T Consensus 217 ~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 217 LRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred cCcccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11112235678999999999999999999999875
No 305
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=2.5e-33 Score=306.50 Aligned_cols=251 Identities=22% Similarity=0.376 Sum_probs=186.4
Q ss_pred eeccccCeEEEEEEecCC---cEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCCC
Q 001544 776 LIGRGSFGSVYIARLQNG---IEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNGS 851 (1057)
Q Consensus 776 ~lg~G~~g~Vy~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gs 851 (1057)
.||+|+||+||+|...++ ..+++|.++... ....+.+.+|+.+++.++||||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 599999999999975433 356677765433 3445788999999999999999999999999999999999999999
Q ss_pred hhHHHhcCC---ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcccc
Q 001544 852 LEKCLYSGN---YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQ 928 (1057)
Q Consensus 852 L~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 928 (1057)
|.+++.+.. ...++..+..++.||++||+||| +.+++||||||+||+++.++.+||+|||++............
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 999987643 34667778899999999999999 899999999999999999999999999998643222111222
Q ss_pred ccccccccccCccccCC-------CCCCccchHHHHHHHHHHHhhC-CCCCCcccccccchhhhhhhccchhHHHhhhcc
Q 001544 929 TQTLATLGYMAPEYGRE-------GRVSTKGDVYSFGILLMETFTR-RKPTDEIFSGEMTLKHWVNDFLPISMMKIIDAN 1000 (1057)
Q Consensus 929 ~~~~~t~~y~aPE~~~~-------~~~~~~~Dv~s~G~il~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1057)
....++..|+|||+... ..++.++|||||||++|||+++ ..||......+ ....... .......+
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~~----~~~~~~~~-- 231 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDRE-VLNHVIK----DQQVKLFK-- 231 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHh----hcccccCC--
Confidence 33457789999998743 2457899999999999999975 56765421110 0110000 00000000
Q ss_pred cccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHH
Q 001544 1001 LLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLL 1045 (1057)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1045 (1057)
.......+..+.+++..|| .+|++||+++|+++.|.
T Consensus 232 --------~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 232 --------PQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred --------CccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 0011124567888999999 67999999999998774
No 306
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2e-33 Score=313.34 Aligned_cols=254 Identities=21% Similarity=0.306 Sum_probs=197.7
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
++|+..+.||+|+||.||+|... +++.||+|.+.... ......+.+|+++++.++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888899999999999999865 57899999986543 234567889999999999999999999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
||+++++|.+++...+ .+++..+..++.|++.|++||| +.+++||||||+||+++.++.+|++|||.++.......
T Consensus 81 e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~ 156 (305)
T cd05609 81 EYVEGGDCATLLKNIG-ALPVDMARMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLT 156 (305)
T ss_pred ecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcc
Confidence 9999999999997654 5899999999999999999999 89999999999999999999999999999864211000
Q ss_pred -------------ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccch
Q 001544 925 -------------SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPI 991 (1057)
Q Consensus 925 -------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 991 (1057)
........++..|+|||.+....++.++|+||||+++|||++|+.||..... ..+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~-----~~~~~----- 226 (305)
T cd05609 157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP-----EELFG----- 226 (305)
T ss_pred ccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHH-----
Confidence 0011123467789999999888899999999999999999999999854211 11100
Q ss_pred hHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 992 SMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
........ .......++.++.+++.+||+.+|++||++.++.+.+
T Consensus 227 ---~~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll 271 (305)
T cd05609 227 ---QVISDDIE-----WPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVK 271 (305)
T ss_pred ---HHHhcccC-----CCCccccCCHHHHHHHHHHhccChhhccCccCHHHHH
Confidence 00000000 0001113567789999999999999999854444333
No 307
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.4e-33 Score=312.33 Aligned_cols=245 Identities=25% Similarity=0.323 Sum_probs=201.8
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36888899999999999999865 68999999986432 234567889999999999999999999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
||+++++|.+++.... .+++..+..++.|+++||+||| +.+++||||+|+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~-- 154 (290)
T cd05580 81 EYVPGGELFSHLRKSG-RFPEPVARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR-- 154 (290)
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC--
Confidence 9999999999987764 5899999999999999999999 899999999999999999999999999999865322
Q ss_pred ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccc
Q 001544 925 SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLIT 1004 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1057)
.....+++.|+|||...+...+.++||||+|+++|||++|+.||...... .. .......
T Consensus 155 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~---------~~~~~~~----- 213 (290)
T cd05580 155 ---TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI----QI---------YEKILEG----- 213 (290)
T ss_pred ---CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH----HH---------HHHHhcC-----
Confidence 23345788999999998888899999999999999999999998652210 00 0011100
Q ss_pred cchhhHHHHHHHHHHHHHHhHcccCCCCCCC-----CHHHHHHH
Q 001544 1005 EDKHFAAKEQCASSVFNLAMECTVESPDERI-----TAKEIVRR 1043 (1057)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 1043 (1057)
....+...+..+.+++.+||..+|++|| +++|+++|
T Consensus 214 ---~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 214 ---KVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred ---CccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 0111123466788999999999999999 78888765
No 308
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=2.5e-33 Score=309.41 Aligned_cols=250 Identities=27% Similarity=0.355 Sum_probs=193.1
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc-hhHHHHHHHHHHH-HHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH-ERAFKSFDTECEV-MKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
++|++.+.||+|+||.||+|... +|+.||+|+++... ......+..|+.. ++..+||||+++++++..++..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 36888999999999999999865 69999999986543 2223445556665 566789999999999999999999999
Q ss_pred EccCCChhHHHhc---CCccCCHHHHHHHHHHHHHHHHHHHhCCCC-CeEEccCCCCCeeeCCCCcEEEEcccccccccC
Q 001544 846 YMRNGSLEKCLYS---GNYILDIFQRLNIMIDVASALEYLHFGYSA-PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIG 921 (1057)
Q Consensus 846 ~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~-~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 921 (1057)
|++ |+|.+++.. ....+++..+..++.|++.|++||| ++ +++||||||+||+++.++.+||+|||.++....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 997 588777654 2346899999999999999999999 76 999999999999999999999999999986532
Q ss_pred CCCccccccccccccccCccccCC----CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhh
Q 001544 922 EDQSMTQTQTLATLGYMAPEYGRE----GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKII 997 (1057)
Q Consensus 922 ~~~~~~~~~~~~t~~y~aPE~~~~----~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1057)
. .......++..|+|||.+.+ ..++.++|+||+||++|||++|+.||.......... ....
T Consensus 157 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~------------~~~~ 221 (283)
T cd06617 157 S---VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQL------------KQVV 221 (283)
T ss_pred c---cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHH------------HHHH
Confidence 1 12233457888999998764 446889999999999999999999986422111111 1111
Q ss_pred hcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 998 DANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 998 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
..... ..+ ...++.++.+++.+||..+|++||++.+++++
T Consensus 222 ~~~~~-----~~~-~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 222 EEPSP-----QLP-AEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred hcCCC-----CCC-ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 10000 000 12356778999999999999999999999974
No 309
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=2.8e-33 Score=308.98 Aligned_cols=266 Identities=26% Similarity=0.316 Sum_probs=199.0
Q ss_pred CCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 771 FSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
|++.+.||+|++|.||+|... +|+.||||++.... ......+.+|++++++++|||++++++++.+++..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 567789999999999999864 79999999986543 223456888999999999999999999999999999999999
Q ss_pred cCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 848 RNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 848 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
+ ++|.+++.... ..+++.++..++.|+++||+||| +.+++||||+|+||++++++.++++|||.+...... ..
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~--~~ 154 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVP--VR 154 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCC--cc
Confidence 5 68999887654 45899999999999999999999 899999999999999999999999999999764221 11
Q ss_pred ccccccccccccCccccCCC-CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhcc-ch-hHH-------Hh
Q 001544 927 TQTQTLATLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFL-PI-SMM-------KI 996 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~-~~-~~~-------~~ 996 (1057)
......++..|+|||++.+. .++.++|+||+|+++|||++|+.||......+. ......... +. ... +.
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ-LFRIFRTLGTPDEDVWPGVTSLPDY 233 (283)
T ss_pred ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChHHhhhhhhchhh
Confidence 22233567899999987654 468899999999999999999999865322111 111110000 00 000 00
Q ss_pred hhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 997 IDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 997 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
................+..+.++.+++.+|++.+|++||+++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 234 KPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00000000000111123345788999999999999999999999865
No 310
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=8.2e-34 Score=308.59 Aligned_cols=248 Identities=24% Similarity=0.339 Sum_probs=202.9
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
+|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4778899999999999999865 68999999996432 2446788999999999999999999999999999999999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
|+++++|.+++... ..+++.++..++.|+++|++||| +.+++|+||+|+||++++++.++++|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-- 154 (258)
T ss_pred CCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc--
Confidence 99999999998766 46899999999999999999999 8999999999999999999999999999987653221
Q ss_pred cccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccccccc
Q 001544 926 MTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITE 1005 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1057)
......++..|+|||...+..++.++|+||+|+++|+|++|+.||...... ..... ......
T Consensus 155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~---------~~~~~~------ 216 (258)
T cd05578 155 -LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT--IRDQI---------RAKQET------ 216 (258)
T ss_pred -cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc--HHHHH---------HHHhcc------
Confidence 223445788899999998888999999999999999999999998753221 01110 111110
Q ss_pred chhhHHHHHHHHHHHHHHhHcccCCCCCCCCH--HHHHH
Q 001544 1006 DKHFAAKEQCASSVFNLAMECTVESPDERITA--KEIVR 1042 (1057)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~--~evl~ 1042 (1057)
.....++..+.++.+++.+||+.||++||++ +|+++
T Consensus 217 -~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 217 -ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred -ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence 0111223456788999999999999999999 66654
No 311
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.8e-33 Score=311.29 Aligned_cols=269 Identities=24% Similarity=0.328 Sum_probs=203.1
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
++|+..+.||+|+||.||+|..+ +++.||||+++... ....+.+.+|++++++++|+||+++++++..++..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36888999999999999999865 58899999986432 3345778999999999999999999999999999999999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
|++++.+..+... ...+++.++..++.|++.|++||| +.+++|||++|+||++++++.+||+|||.+........
T Consensus 81 ~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~- 155 (288)
T cd07833 81 YVERTLLELLEAS-PGGLPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA- 155 (288)
T ss_pred cCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc-
Confidence 9998777665544 345899999999999999999999 89999999999999999999999999999987643322
Q ss_pred cccccccccccccCccccCCC-CCCccchHHHHHHHHHHHhhCCCCCCcccccccch--hhhhhhccchhHHHhhhcccc
Q 001544 926 MTQTQTLATLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTL--KHWVNDFLPISMMKIIDANLL 1002 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 1002 (1057)
.......++..|+|||+..+. .++.++||||+|+++|||++|+.||......+... ..+... .+............
T Consensus 156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 234 (288)
T cd07833 156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGP-LPPSHQELFSSNPR 234 (288)
T ss_pred ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC-CCHHHhhhcccCcc
Confidence 122345678889999998887 78999999999999999999999986532111100 000000 00011111000000
Q ss_pred c------ccchh----hHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1003 I------TEDKH----FAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1003 ~------~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
. ..... ...+..++.++.+++.+||..+|++||++++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 235 FAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred ccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 0 00000 00112347889999999999999999999999864
No 312
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=2.8e-33 Score=314.11 Aligned_cols=253 Identities=28% Similarity=0.391 Sum_probs=202.9
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccch---hHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHE---RAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
++|+..+.||+|+||+||+|... +++.||+|.+..... ...+.+.+|++++++++||||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888899999999999999865 589999999965432 34567889999999999999999999999999999999
Q ss_pred EEccCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC
Q 001544 845 EYMRNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 923 (1057)
||+.+++|.+++.... ..+++..+..++.|+++||+||| +.+++||||||+||+++.++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 9999999999987543 56899999999999999999999 9999999999999999999999999999987542211
Q ss_pred Cc---------------------------cccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccc
Q 001544 924 QS---------------------------MTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFS 976 (1057)
Q Consensus 924 ~~---------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~ 976 (1057)
.. .......|+..|+|||+..+..++.++||||||+++|||++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 10 011123578889999999888899999999999999999999999865221
Q ss_pred cccchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCC----HHHHHHH
Q 001544 977 GEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERIT----AKEIVRR 1043 (1057)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps----~~evl~~ 1043 (1057)
.+ ......+... ..+.....+.++.+++.+|++.+|++||+ +.|++++
T Consensus 238 ~~-------------~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 238 DE-------------TFSNILKKEV------TFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred HH-------------HHHHHhcCCc------cCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 10 0111111111 11111125678999999999999999999 7777775
No 313
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=3.2e-33 Score=307.43 Aligned_cols=248 Identities=28% Similarity=0.428 Sum_probs=199.6
Q ss_pred CCCCCceeccccCeEEEEEEe-cCCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcC---CCCceeEeeeeccCCeeEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIR---HRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lV~ 844 (1057)
.|+..+.||+|+||.||+|.. .+++.||+|.++... ....+++.+|++++++++ |||++++++++.++...++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 467788999999999999985 478999999986542 344567889999999997 999999999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
||+++++|.+++... .+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++++|||.+..+....
T Consensus 82 e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06917 82 EYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS- 155 (277)
T ss_pred ecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc-
Confidence 999999999988664 5899999999999999999999 9999999999999999999999999999998764322
Q ss_pred ccccccccccccccCccccCCC-CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccccc
Q 001544 925 SMTQTQTLATLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLI 1003 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1057)
.......|+..|+|||...++ .++.++|||||||++|||++|+.||...... .+... ....
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-----~~~~~---------~~~~--- 217 (277)
T cd06917 156 -SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF-----RAMML---------IPKS--- 217 (277)
T ss_pred -cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh-----hhhhc---------cccC---
Confidence 222334688899999987654 4688999999999999999999998653211 11000 0000
Q ss_pred ccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1004 TEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1004 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
...... ....+.++.+++.+||+.||++||++.|++++
T Consensus 218 -~~~~~~-~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 218 -KPPRLE-DNGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred -CCCCCC-cccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 000000 01145678999999999999999999999875
No 314
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=3.4e-33 Score=309.92 Aligned_cols=268 Identities=22% Similarity=0.254 Sum_probs=199.5
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccC--CeeEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNE--DFKALI 843 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV 843 (1057)
++|+..+.||+|+||.||+|... +++.||+|.++... ......+.+|++++++++||||+++++++... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888899999999999999876 58899999986443 22234567899999999999999999998776 899999
Q ss_pred EEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC
Q 001544 844 LEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 923 (1057)
|||+++ +|.+++......+++.++..++.|+++||+||| +.+++||||||+||+++.++.+||+|||.+.......
T Consensus 85 ~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 85 MEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred ehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence 999975 999988776667999999999999999999999 8999999999999999999999999999998653321
Q ss_pred CccccccccccccccCccccCCC-CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhc---cchhHHHhhhc
Q 001544 924 QSMTQTQTLATLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDF---LPISMMKIIDA 999 (1057)
Q Consensus 924 ~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 999 (1057)
.......++..|+|||.+.+. .++.++|+||+|+++|||++|+.||......+ ......... .+.......+.
T Consensus 161 --~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 237 (293)
T cd07843 161 --KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEID-QLNKIFKLLGTPTEKIWPGFSEL 237 (293)
T ss_pred --cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCchHHHHHhhcc
Confidence 222334578889999987654 46889999999999999999999987532111 000000000 00000000000
Q ss_pred cccc-----ccch---hhHHHHH-HHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1000 NLLI-----TEDK---HFAAKEQ-CASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1000 ~~~~-----~~~~---~~~~~~~-~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.... .... ....+.. ++..+.+++.+||+.+|++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 238 PGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred chhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0000 0000 0000011 36678999999999999999999999875
No 315
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=6.7e-33 Score=301.50 Aligned_cols=252 Identities=29% Similarity=0.422 Sum_probs=206.5
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccC--CeeEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNE--DFKALIL 844 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV~ 844 (1057)
+|+..+.||+|++|.||+|... +++.|++|++.... ....+.+.+|++++++++||||+++++.+.+. +..++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4677899999999999999876 78999999986554 24567899999999999999999999999888 8999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
||+++++|.+++.... .+++.++..++.|+++|++||| +.+++||||+|+||+++.++.++|+|||.+........
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 156 (260)
T cd06606 81 EYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIET 156 (260)
T ss_pred EecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEecccccc
Confidence 9999999999988765 6899999999999999999999 89999999999999999999999999999987643322
Q ss_pred ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccc
Q 001544 925 SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLIT 1004 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1057)
........++..|+|||...+...+.++||||+|+++|+|++|+.||...... ... ......
T Consensus 157 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~---------~~~~~~------ 218 (260)
T cd06606 157 GEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNP---MAA---------LYKIGS------ 218 (260)
T ss_pred cccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch---HHH---------HHhccc------
Confidence 11233456788999999998888999999999999999999999998763210 000 001100
Q ss_pred cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1005 EDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.......+...+.++.+++.+|++.+|++||++.|++++
T Consensus 219 ~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 219 SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 000111123346789999999999999999999999875
No 316
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=6.9e-33 Score=310.67 Aligned_cols=246 Identities=27% Similarity=0.373 Sum_probs=197.8
Q ss_pred CCCCceeccccCeEEEEEEec-CCcEEEEEEeecc---chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 771 FSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ---HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
|+..+.||+|+||.||+|+.. ++..||+|++... .......+.+|++++++++|||++++++++.+++..++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 666789999999999999854 6899999998643 233456788999999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 847 MRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
+.+ ++.+.+......+++.++..++.|++.|+.||| +.+|+||||+|+||+++.++.++|+|||++.....
T Consensus 107 ~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~----- 177 (317)
T cd06635 107 CLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP----- 177 (317)
T ss_pred CCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCccccCC-----
Confidence 975 788877665667999999999999999999999 99999999999999999999999999999875421
Q ss_pred ccccccccccccCccccC---CCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccccc
Q 001544 927 TQTQTLATLGYMAPEYGR---EGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLI 1003 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~---~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1057)
.....++..|+|||++. .+.++.++|||||||++|||++|+.||...... .....+ .....
T Consensus 178 -~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-~~~~~~------------~~~~~-- 241 (317)
T cd06635 178 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHI------------AQNES-- 241 (317)
T ss_pred -cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHHHH------------HhccC--
Confidence 12345788999999863 456889999999999999999999998652111 001111 10000
Q ss_pred ccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHH
Q 001544 1004 TEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLL 1045 (1057)
Q Consensus 1004 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1045 (1057)
.......++..+.+++.+|++.+|++||++.|++++..
T Consensus 242 ----~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 279 (317)
T cd06635 242 ----PTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMF 279 (317)
T ss_pred ----CCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChh
Confidence 00111234567899999999999999999999999753
No 317
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4e-35 Score=344.42 Aligned_cols=254 Identities=28% Similarity=0.438 Sum_probs=207.3
Q ss_pred HhCCCCCCceeccccCeEEEEEE-ecCCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEE
Q 001544 767 ATNGFSENNLIGRGSFGSVYIAR-LQNGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALI 843 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 843 (1057)
.+-+|.....||.|.||.||-|. .++|...|||.++... ....+.+.+|+.++..++|||+|+++|.-...+..+|-
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence 34467778899999999999997 5579999999886543 34557788999999999999999999999989999999
Q ss_pred EEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC
Q 001544 844 LEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 923 (1057)
||||++|+|.+.+..++ ..++.-...+..|++.|++||| +.|||||||||.||+++.+|-+|++|||.|+.+.+..
T Consensus 1313 MEyC~~GsLa~ll~~gr-i~dE~vt~vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHGR-IEDEMVTRVYTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred HHHhccCcHHHHHHhcc-hhhhhHHHHHHHHHHHHHHHHH---hcCceecCCCccceeeecCCcEEeecccceeEecCch
Confidence 99999999999887765 3666666778899999999999 9999999999999999999999999999999876542
Q ss_pred C--ccccccccccccccCccccCCCC---CCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhh
Q 001544 924 Q--SMTQTQTLATLGYMAPEYGREGR---VSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIID 998 (1057)
Q Consensus 924 ~--~~~~~~~~~t~~y~aPE~~~~~~---~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1057)
. .......+||+.|||||++.+.. ...++||||+|||+.||+||+.||...... |. -++.
T Consensus 1389 ~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne------~a---------IMy~ 1453 (1509)
T KOG4645|consen 1389 QTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE------WA---------IMYH 1453 (1509)
T ss_pred hcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch------hH---------HHhH
Confidence 1 22334568999999999987543 567899999999999999999998763221 11 1111
Q ss_pred cccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 999 ANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
+..+...+.++.++++-.+++..|+..||++|.++.|++++
T Consensus 1454 ----V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1454 ----VAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred ----HhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 11111223345588899999999999999999999988876
No 318
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=6.1e-33 Score=306.10 Aligned_cols=263 Identities=22% Similarity=0.281 Sum_probs=195.9
Q ss_pred CCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcC-CCCceeEeeeeccC--CeeEEEEE
Q 001544 771 FSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIR-HRNLTKIISSCSNE--DFKALILE 845 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lV~E 845 (1057)
|++.+.||+|+||.||+|... +++.||+|+++... ........+|+.++.++. |||++++++++.++ +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 567789999999999999854 68999999986532 222234457888999885 99999999999877 88999999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
|++ |++.+.+......+++.++..++.|++.||+||| +.+++||||+|+||+++. +.+||+|||.++......
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~-- 153 (282)
T cd07831 81 LMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP-- 153 (282)
T ss_pred cCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEecccccccccCC--
Confidence 997 4888888766567899999999999999999999 899999999999999999 999999999998653221
Q ss_pred cccccccccccccCccccC-CCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhcc---chhHHHhhhccc
Q 001544 926 MTQTQTLATLGYMAPEYGR-EGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFL---PISMMKIIDANL 1001 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~-~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 1001 (1057)
......++..|+|||... ++.++.++||||+||++|||++|..||......+ ...+..... +..+........
T Consensus 154 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07831 154 -PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD--QIAKIHDVLGTPDAEVLKKFRKSR 230 (282)
T ss_pred -CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH--HHHHHHHHcCCCCHHHHHhhcccc
Confidence 122345788999999754 4567889999999999999999999986532111 111111111 011111111000
Q ss_pred ccc-------cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1002 LIT-------EDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1002 ~~~-------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
... ...-......++.++.+++.+|++++|++||++.|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 231 HMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 000 000011123457889999999999999999999999875
No 319
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1e-33 Score=331.34 Aligned_cols=253 Identities=25% Similarity=0.401 Sum_probs=189.1
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc-chhHHHHHHHHHHHHHhcCCCCceeEeeeeccC--------
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ-HERAFKSFDTECEVMKSIRHRNLTKIISSCSNE-------- 837 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-------- 837 (1057)
..+|+..++||+||||.||+++.+ ||+.||||++... .......+.+|+.++++++|||||+++..|.+.
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e 557 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE 557 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence 346778899999999999999977 8999999999544 445567889999999999999999997322100
Q ss_pred --------------------------------------------------------------------------------
Q 001544 838 -------------------------------------------------------------------------------- 837 (1057)
Q Consensus 838 -------------------------------------------------------------------------------- 837 (1057)
T Consensus 558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e 637 (1351)
T KOG1035|consen 558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE 637 (1351)
T ss_pred ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence
Q ss_pred -------------------------------CeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCC
Q 001544 838 -------------------------------DFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGY 886 (1057)
Q Consensus 838 -------------------------------~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~ 886 (1057)
...||-||||+..++.++++.+...-.....++++++|++||+|+|
T Consensus 638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH--- 714 (1351)
T KOG1035|consen 638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH--- 714 (1351)
T ss_pred CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH---
Confidence 1257889999998888877765532246678999999999999999
Q ss_pred CCCeEEccCCCCCeeeCCCCcEEEEccccccccc----------------CCCCccccccccccccccCccccCCC---C
Q 001544 887 SAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLI----------------GEDQSMTQTQTLATLGYMAPEYGREG---R 947 (1057)
Q Consensus 887 ~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~----------------~~~~~~~~~~~~~t~~y~aPE~~~~~---~ 947 (1057)
+.|||||||||.||++++++.|||+|||+|+... ........+..+||.-|+|||++.+. .
T Consensus 715 ~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~ 794 (1351)
T KOG1035|consen 715 DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNK 794 (1351)
T ss_pred hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccccc
Confidence 9999999999999999999999999999998721 01122245667899999999987654 4
Q ss_pred CCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcc
Q 001544 948 VSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECT 1027 (1057)
Q Consensus 948 ~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 1027 (1057)
|+.|+|+||+|||++||+. ||....+.-..+.. .-+.... .+ ..+. ....+.-..+|.+|+
T Consensus 795 Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~------------LR~g~iP-~~-~~f~--~~~~~~e~slI~~Ll 855 (1351)
T KOG1035|consen 795 YNSKIDMYSLGIVLFEMLY---PFGTSMERASILTN------------LRKGSIP-EP-ADFF--DPEHPEEASLIRWLL 855 (1351)
T ss_pred ccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHh------------cccCCCC-CC-cccc--cccchHHHHHHHHHh
Confidence 9999999999999999996 56542111111111 1001010 00 0000 111233457999999
Q ss_pred cCCCCCCCCHHHHHH
Q 001544 1028 VESPDERITAKEIVR 1042 (1057)
Q Consensus 1028 ~~dP~~Rps~~evl~ 1042 (1057)
++||.+||||.|+++
T Consensus 856 ~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 856 SHDPSKRPTATELLN 870 (1351)
T ss_pred cCCCccCCCHHHHhh
Confidence 999999999999986
No 320
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=7.3e-33 Score=305.85 Aligned_cols=267 Identities=23% Similarity=0.287 Sum_probs=200.4
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccch-hHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHE-RAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
+|+..+.||+|++|.||+|+.. +|+.||||+++.... ...+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4788899999999999999875 689999999865432 23456778999999999999999999999999999999999
Q ss_pred cCCChhHHHhcCC--ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 848 RNGSLEKCLYSGN--YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 848 ~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
++ +|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+||++++++.++++|||+++..... .
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~--~ 154 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIP--V 154 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCC--c
Confidence 85 8888876544 46899999999999999999999 899999999999999999999999999999754221 1
Q ss_pred cccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhh---ccchhHHHhhh---
Q 001544 926 MTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVND---FLPISMMKIID--- 998 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--- 998 (1057)
.......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||......+. ....... ...........
T Consensus 155 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07836 155 NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQ-LLKIFRIMGTPTESTWPGISQLPE 233 (284)
T ss_pred cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCChhhHHHHhcCch
Confidence 12233456889999998765 3568899999999999999999999875322111 1100000 00000000000
Q ss_pred --cccccc-cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 999 --ANLLIT-EDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 999 --~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
...... ........+.++.++.+++.+|++.||++||++.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 234 YKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred hcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000000 000011123456789999999999999999999999864
No 321
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=9.2e-33 Score=301.50 Aligned_cols=250 Identities=23% Similarity=0.279 Sum_probs=195.8
Q ss_pred HHHHHHhCCCCCCcee--ccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhc-CCCCceeEeeeeccC
Q 001544 762 LELFQATNGFSENNLI--GRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSI-RHRNLTKIISSCSNE 837 (1057)
Q Consensus 762 ~~~~~~~~~~~~~~~l--g~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 837 (1057)
.+.....++|++.+.+ |+|+||.||++..+ ++..+|+|++....... .|+.....+ +||||+++++++...
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~~ 81 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTTL 81 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEecC
Confidence 3444455677777776 99999999999854 68899999986542211 122222222 699999999999999
Q ss_pred CeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC-cEEEEccccc
Q 001544 838 DFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM-VAHLSDFGIA 916 (1057)
Q Consensus 838 ~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfg~a 916 (1057)
+..++||||+++++|.+++.... .+++.++..++.|+++|++||| +.+++||||||+||+++.++ .++++|||.+
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~ 157 (267)
T PHA03390 82 KGHVLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRIYLCDYGLC 157 (267)
T ss_pred CeeEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEeCCCCeEEEecCccc
Confidence 99999999999999999997765 6899999999999999999999 99999999999999999988 9999999998
Q ss_pred ccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHh
Q 001544 917 KLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKI 996 (1057)
Q Consensus 917 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1057)
+..... ....++..|+|||++.+..++.++||||+|+++|||++|+.||......+.....|....
T Consensus 158 ~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-------- 223 (267)
T PHA03390 158 KIIGTP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-------- 223 (267)
T ss_pred eecCCC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh--------
Confidence 765211 123578899999999888899999999999999999999999975433332222222111
Q ss_pred hhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCC-HHHHHHH
Q 001544 997 IDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERIT-AKEIVRR 1043 (1057)
Q Consensus 997 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-~~evl~~ 1043 (1057)
. .........++.+.+++.+|++.+|++||+ ++|+++|
T Consensus 224 -~--------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 224 -Q--------KKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred -c--------ccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 0 011111246778999999999999999996 6998864
No 322
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=4.1e-33 Score=311.58 Aligned_cols=269 Identities=25% Similarity=0.276 Sum_probs=199.0
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccch--hHHHHHHHHHHHHHhcCCCCceeEeeeeccC--CeeEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHE--RAFKSFDTECEVMKSIRHRNLTKIISSCSNE--DFKAL 842 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 842 (1057)
.++|++.+.||+|+||.||+|... +|+.||+|+++.... .....+.+|++++++++|+||+++++++.+. +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 457899999999999999999865 689999999864432 2233566799999999999999999998654 56899
Q ss_pred EEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCC
Q 001544 843 ILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 922 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 922 (1057)
||||+++ +|.+++......+++.++..++.|+++|++||| +.+++||||||+||++++++.+||+|||.+......
T Consensus 86 v~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 86 VMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred EEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 9999975 888888766567999999999999999999999 999999999999999999999999999999876332
Q ss_pred CCccccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhcc--chhHHHhhhc
Q 001544 923 DQSMTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFL--PISMMKIIDA 999 (1057)
Q Consensus 923 ~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 999 (1057)
. .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||......+ .+........ ........+.
T Consensus 162 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07845 162 A--KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE-QLDLIIQLLGTPNESIWPGFSD 238 (309)
T ss_pred c--CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCChhhchhhhc
Confidence 2 12233345778999998765 457899999999999999999999986532111 1110000000 0000000000
Q ss_pred ----ccccccch---hh-HHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1000 ----NLLITEDK---HF-AAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1000 ----~~~~~~~~---~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
........ .. ......++++.+++.+|++.||++|||+.|+++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 239 LPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred ccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00000000 00 0011246778899999999999999999999986
No 323
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-34 Score=281.55 Aligned_cols=250 Identities=23% Similarity=0.302 Sum_probs=199.7
Q ss_pred CCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcC-CCCceeEeeeeccCCeeEEEEEEc
Q 001544 771 FSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIR-HRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
.+....||.|+.|.||+++.. +|...|||.+.... ....+++...++++..-. .|.||+.+|||..+....+.||.|
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM 173 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM 173 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH
Confidence 345577999999999999865 58999999996543 445677888888877764 899999999999888888999988
Q ss_pred cCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccc
Q 001544 848 RNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT 927 (1057)
Q Consensus 848 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 927 (1057)
.. -+++++..-..++++.-+-++...++.||.||.+ .++|+|||+||+|||+|+.|.+|+||||.+.++. ....
T Consensus 174 s~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlv---dSkA 247 (391)
T KOG0983|consen 174 ST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV---DSKA 247 (391)
T ss_pred HH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceee---cccc
Confidence 54 6677777666779998888999999999999986 7899999999999999999999999999998763 3344
Q ss_pred cccccccccccCccccCC---CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccc
Q 001544 928 QTQTLATLGYMAPEYGRE---GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLIT 1004 (1057)
Q Consensus 928 ~~~~~~t~~y~aPE~~~~---~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1057)
.+...|-+.|||||-+.- ..|+-++||||||+.++|++||+.||..-..+-.. +.++.+.
T Consensus 248 htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~------------ltkvln~----- 310 (391)
T KOG0983|consen 248 HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEV------------LTKVLNE----- 310 (391)
T ss_pred cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHH------------HHHHHhc-----
Confidence 556678889999997753 46888999999999999999999998762222111 1122221
Q ss_pred cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1005 EDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
..+..+....+++.+.+++..|+..|+.+||...++++|
T Consensus 311 ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 311 EPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred CCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 112222223378889999999999999999999999886
No 324
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=5.5e-33 Score=314.22 Aligned_cols=269 Identities=23% Similarity=0.295 Sum_probs=198.5
Q ss_pred hCCCCCCceeccccCeEEEEEEe-cCCcEEEEEEeecc-chhHHHHHHHHHHHHHhcCCCCceeEeeeeccC-----Cee
Q 001544 768 TNGFSENNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQ-HERAFKSFDTECEVMKSIRHRNLTKIISSCSNE-----DFK 840 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 840 (1057)
.++|++.+.||+|+||.||+|.. .+|+.||||+++.. .......+.+|++++++++||||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 46899999999999999999975 46899999998643 233456788899999999999999999876543 357
Q ss_pred EEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccccccccc
Q 001544 841 ALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLI 920 (1057)
Q Consensus 841 ~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 920 (1057)
++|+||+++ ++.+.+... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 84 ~lv~e~~~~-~l~~~~~~~--~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 84 YIVQELMET-DLYKLIKTQ--HLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred EEEehhccc-CHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence 999999975 888777543 4899999999999999999999 9999999999999999999999999999997653
Q ss_pred CCCC-ccccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhc---cchhHHH
Q 001544 921 GEDQ-SMTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDF---LPISMMK 995 (1057)
Q Consensus 921 ~~~~-~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~ 995 (1057)
.... ........++..|+|||.+.+ ..++.++||||+||++|||++|+.||...... .....+.... .+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~ 236 (336)
T cd07849 158 PEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL-HQLNLILGVLGTPSQEDLNC 236 (336)
T ss_pred ccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHcCCCCHHHHHH
Confidence 2221 112233467889999998654 56889999999999999999999998652111 0111111000 0011111
Q ss_pred hhhccc-------ccccchhh-HHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 996 IIDANL-------LITEDKHF-AAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 996 ~~~~~~-------~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
+.+... ........ ...+..+.++.+++.+||+.+|++|||+.|+++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 237 IISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred hhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 111000 00000000 1112346779999999999999999999999987
No 325
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=9.4e-33 Score=310.07 Aligned_cols=270 Identities=21% Similarity=0.289 Sum_probs=197.2
Q ss_pred CCCCCceeccccCeEEEEEEec---CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccC--CeeE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ---NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNE--DFKA 841 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 841 (1057)
+|++.+.||+|+||.||+|... +++.||+|.+.... ......+.+|++++++++||||+++++++.+. +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4778899999999999999864 47999999997632 33446678899999999999999999999887 8899
Q ss_pred EEEEEccCCChhHHHhcC----CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC----CCcEEEEcc
Q 001544 842 LILEYMRNGSLEKCLYSG----NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD----NMVAHLSDF 913 (1057)
Q Consensus 842 lV~E~~~~gsL~~~l~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~----~~~~kl~Df 913 (1057)
+||||+++ ++.+.+... ...+++..+..++.|++.|++||| +.+|+||||||+||+++. ++.+|++||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999976 666655322 136889999999999999999999 999999999999999999 999999999
Q ss_pred cccccccCCCC-ccccccccccccccCccccCCC-CCCccchHHHHHHHHHHHhhCCCCCCccccccc--------chhh
Q 001544 914 GIAKLLIGEDQ-SMTQTQTLATLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEM--------TLKH 983 (1057)
Q Consensus 914 g~a~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~--------~~~~ 983 (1057)
|+++....... ........++..|+|||...+. .++.++||||+||++|||++|+.||........ ....
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99986532221 1222334678899999987654 578999999999999999999999975432210 0000
Q ss_pred hhhhccc--h----------hHHH---hhhcccccccch--hhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 984 WVNDFLP--I----------SMMK---IIDANLLITEDK--HFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 984 ~~~~~~~--~----------~~~~---~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
++..... . .... ............ ........+.++.+++.+|++.||++|||+.|+++|
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0000000 0 0000 000000000000 000001345678999999999999999999999875
No 326
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1.5e-35 Score=321.16 Aligned_cols=364 Identities=28% Similarity=0.398 Sum_probs=254.4
Q ss_pred ceeEEeeecccCcc-cccccccCCCCCcEEeCCCCCccccCCcccccccccceeecccccccCCCCccccccCCCCeEec
Q 001544 72 RVTALNISYLSLTG-NIPRQLGNLSSLEILDLNFNRLSGEIPWELGNLAKLEKLLLHNNFLTGTIPFSIFKLSSLLDLKL 150 (1057)
Q Consensus 72 ~v~~l~l~~~~l~g-~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 150 (1057)
-|..+|+++|.++| ..|.....+++++.|.|...++. .+|++++.|.+|++|.+++|++. .+-.+++.|+.|+.+++
T Consensus 8 FVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~ 85 (1255)
T KOG0444|consen 8 FVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIV 85 (1255)
T ss_pred eeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhh
Confidence 47889999999995 78999999999999999999998 89999999999999999999999 77889999999999999
Q ss_pred cCCCCCCC-CCcccccCCCCCceeEccCCcccccCchhhhccccCCeeEeeccCCccccCccccCCCCcccEEEeecccc
Q 001544 151 SDNNLTGT-IPSHNLGNLSSLQLLDLSDNQLSGSIPSFIFKISSLQALHFGNNRLSGELPANICDNLPFLNFFSVYKNMF 229 (1057)
Q Consensus 151 s~n~l~~~-~p~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~l~~n~~ 229 (1057)
.+|++... ||. .+-.+..|+.||||+|++. ..|..+..-+++-.|+||+|+|. .||..+|-+
T Consensus 86 R~N~LKnsGiP~-diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfin-------------- 148 (1255)
T KOG0444|consen 86 RDNNLKNSGIPT-DIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFIN-------------- 148 (1255)
T ss_pred hccccccCCCCc-hhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHh--------------
Confidence 99998643 565 4778999999999999998 78999999999999999999996 788776554
Q ss_pred ccCccccccCCCCCcEEEccCCCCcCCccccccCcCCCcEEeeeccccccccCccccccccccEEEeecCccc-cccCcc
Q 001544 230 YGGISSTLSNCKHLRILDLSFNDLWGDIPKEIGNLTKLKELFLDFNILQGEIPHTVGNLHNLEYLSLVNNELV-GTVPAT 308 (1057)
Q Consensus 230 ~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~~~~ 308 (1057)
+..|-.||||+|++. .+|+.+..+..|++|.|++|.+....-..+..+++|+.|.+++.+-+ ..+|.+
T Consensus 149 ----------LtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Pts 217 (1255)
T KOG0444|consen 149 ----------LTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTS 217 (1255)
T ss_pred ----------hHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCc
Confidence 455555666666664 44555556666666666666555333333444555555666655433 245555
Q ss_pred ccccccccEEEecCCccccCCCCCcccCCCCCceEEecCccccccCCccccccccccccccccccccccccchhcccccc
Q 001544 309 IFNVSTLKLIELSNNTFFGSLPSSTDVQLPNLEELYLWGNNFSGTLPSFIFNASNLSKLSLGDNSFSGLIPNTFGNLRNL 388 (1057)
Q Consensus 309 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 388 (1057)
+..+.+|..+|+|.|.+. .+|...+ .+++|+.|+|++|+|+ .+........+|++|+||.|+++. .|+++..++.|
T Consensus 218 ld~l~NL~dvDlS~N~Lp-~vPecly-~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt~-LP~avcKL~kL 293 (1255)
T KOG0444|consen 218 LDDLHNLRDVDLSENNLP-IVPECLY-KLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLTV-LPDAVCKLTKL 293 (1255)
T ss_pred hhhhhhhhhccccccCCC-cchHHHh-hhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhcc-chHHHhhhHHH
Confidence 556666666666666554 4444443 4556666666666665 333444455566666666666663 36666666666
Q ss_pred cEEeccCcccCCCccccccccCCCcchhhhhccCCCcccccccccccccccccEEEcCCCcccccccccccCccCCcEEE
Q 001544 389 KRLRLYNNYLTSPELSFLSSLSNCKYLEIIALSGNPLNGIIPMSAGNLSHSLEELFMPDCNVSGRIPKEIGNLANLVTLD 468 (1057)
Q Consensus 389 ~~L~L~~N~l~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ 468 (1057)
+.|.+.+|+++-.+ ..++..++..|+++..++|.+. .+|+.++.+..|+.|.
T Consensus 294 ~kLy~n~NkL~FeG--iPSGIGKL~~Levf~aanN~LE--------------------------lVPEglcRC~kL~kL~ 345 (1255)
T KOG0444|consen 294 TKLYANNNKLTFEG--IPSGIGKLIQLEVFHAANNKLE--------------------------LVPEGLCRCVKLQKLK 345 (1255)
T ss_pred HHHHhccCcccccC--CccchhhhhhhHHHHhhccccc--------------------------cCchhhhhhHHHHHhc
Confidence 66666666665322 2345555555666555555543 4566666666677777
Q ss_pred ccCCcCCCCCCcccccccccceeecccccC
Q 001544 469 LGGNKFNGSIPIALGKLQKLQLLNLDDNKL 498 (1057)
Q Consensus 469 Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~l 498 (1057)
|+.|++. .+|.++.-|+.|+.|||..|.=
T Consensus 346 L~~NrLi-TLPeaIHlL~~l~vLDlreNpn 374 (1255)
T KOG0444|consen 346 LDHNRLI-TLPEAIHLLPDLKVLDLRENPN 374 (1255)
T ss_pred cccccee-echhhhhhcCCcceeeccCCcC
Confidence 7777666 5666666667777777766643
No 327
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-34 Score=292.61 Aligned_cols=270 Identities=24% Similarity=0.310 Sum_probs=227.2
Q ss_pred HHHHHhCCCCCCceeccccCeEEEEEEec------CCcEEEEEEeecc-chhHHHHHHHHHHHHHhcCCCCceeEeeeec
Q 001544 763 ELFQATNGFSENNLIGRGSFGSVYIARLQ------NGIEVAVKTFDLQ-HERAFKSFDTECEVMKSIRHRNLTKIISSCS 835 (1057)
Q Consensus 763 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 835 (1057)
++.....+++...++-+|.||.||+|.+. +.+.|-||.++.. .+.+...+..|.-.+....|||+..+.+.+.
T Consensus 278 ~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~i 357 (563)
T KOG1024|consen 278 ELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSI 357 (563)
T ss_pred hhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEe
Confidence 34444456777788999999999999543 4566888877533 3455678888988999999999999999875
Q ss_pred c-CCeeEEEEEEccCCChhHHHhcC-------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc
Q 001544 836 N-EDFKALILEYMRNGSLEKCLYSG-------NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMV 907 (1057)
Q Consensus 836 ~-~~~~~lV~E~~~~gsL~~~l~~~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 907 (1057)
+ .+..+.+|.++.-|+|..++... ...++..+...++.|++.|++||| .++|||.||..+|.++|+.-+
T Consensus 358 e~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh---~~~ViHkDiAaRNCvIdd~Lq 434 (563)
T KOG1024|consen 358 EDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH---NHGVIHKDIAARNCVIDDQLQ 434 (563)
T ss_pred eccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH---hcCcccchhhhhcceehhhee
Confidence 4 56788999999999999998722 245778888999999999999999 999999999999999999999
Q ss_pred EEEEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhh
Q 001544 908 AHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVN 986 (1057)
Q Consensus 908 ~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~ 986 (1057)
+|++|=.+++.+.+.+...-.........||+||.+....++.++|||||||++|||+| |+.|+.+..+.|
T Consensus 435 VkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE-------- 506 (563)
T KOG1024|consen 435 VKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE-------- 506 (563)
T ss_pred EEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH--------
Confidence 99999999999998888877777778889999999999999999999999999999999 888987632221
Q ss_pred hccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHHHHhhhh
Q 001544 987 DFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRDFLLRNV 1055 (1057)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~~~~ 1055 (1057)
+.. ....+.+..++..||.+++.+|.-||..+|++||++++++..|.++..++.+.|
T Consensus 507 ------m~~------ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~qlt~YV 563 (563)
T KOG1024|consen 507 ------MEH------YLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQLTRYV 563 (563)
T ss_pred ------HHH------HHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHhhcC
Confidence 111 223455667778899999999999999999999999999999999999888764
No 328
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=6.9e-33 Score=313.67 Aligned_cols=270 Identities=24% Similarity=0.303 Sum_probs=200.6
Q ss_pred HhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc--chhHHHHHHHHHHHHHhc-CCCCceeEeeeeccC--Cee
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ--HERAFKSFDTECEVMKSI-RHRNLTKIISSCSNE--DFK 840 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~--~~~ 840 (1057)
..++|++.+.||+|+||.||+|... +++.||||++... .......+.+|+.+++++ +||||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 3457888899999999999999865 6889999988532 233445677899999999 999999999988643 468
Q ss_pred EEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccccccccc
Q 001544 841 ALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLI 920 (1057)
Q Consensus 841 ~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 920 (1057)
++||||++ ++|..++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.++...
T Consensus 85 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~ 158 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLS 158 (337)
T ss_pred EEEecccc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccchhccc
Confidence 99999997 5999888765 5889999999999999999999 8999999999999999999999999999998664
Q ss_pred CCCCc---cccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhh--ccc----
Q 001544 921 GEDQS---MTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVND--FLP---- 990 (1057)
Q Consensus 921 ~~~~~---~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~--~~~---- 990 (1057)
..... .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+. ....... ...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~ 237 (337)
T cd07852 159 ELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ-LEKIIEVIGPPSAEDI 237 (337)
T ss_pred cccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHHHH
Confidence 33221 12233467889999997654 5578899999999999999999999865322211 0000000 000
Q ss_pred -----hhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 991 -----ISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 991 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.......+..............+.++.++.+++.+||+.+|++|||+.+++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 238 ESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00011111000000000111112357789999999999999999999999986
No 329
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=4.2e-33 Score=302.86 Aligned_cols=249 Identities=24% Similarity=0.392 Sum_probs=200.2
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
+|+..+.||+|+||.||+|... +|..||+|.+.... ....+.+.+|++++++++|+||+++++++...+..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4778899999999999999865 58899999986532 23346788999999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC-cEEEEcccccccccCCCC
Q 001544 847 MRNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM-VAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfg~a~~~~~~~~ 924 (1057)
+++++|.+++.... ..+++..+..++.|+++|++||| +.+++|+||||+||++++++ .+|++|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM- 156 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc-
Confidence 99999999987643 35799999999999999999999 89999999999999999875 56999999997653221
Q ss_pred ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccc
Q 001544 925 SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLIT 1004 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1057)
.......+++.|+|||+..+..++.++||||||+++|||++|+.||.... ...+.. ........
T Consensus 157 -~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~--------~~~~~~~~-- 220 (257)
T cd08225 157 -ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN-----LHQLVL--------KICQGYFA-- 220 (257)
T ss_pred -ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHH--------HHhcccCC--
Confidence 11223457889999999888889999999999999999999999986421 111111 11110000
Q ss_pred cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1005 EDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
+.....+.++.+++.+|+..+|++|||+.|++++
T Consensus 221 -----~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 221 -----PISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred -----CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 0112345678999999999999999999999875
No 330
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=5.4e-33 Score=307.30 Aligned_cols=245 Identities=27% Similarity=0.352 Sum_probs=198.1
Q ss_pred CceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCCCh
Q 001544 774 NNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNGSL 852 (1057)
Q Consensus 774 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL 852 (1057)
..+||+|+||.||+|..+ +++.||||++..........+.+|+.++++++|+|++++++++...+..++||||+++++|
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 367999999999999864 7899999998655555567789999999999999999999999999999999999999999
Q ss_pred hHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcccccccc
Q 001544 853 EKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL 932 (1057)
Q Consensus 853 ~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 932 (1057)
.+++... .+++..+..++.|++.|++||| +.+++||||+|+||++++++.++++|||.+....... .......
T Consensus 105 ~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~--~~~~~~~ 177 (292)
T cd06657 105 TDIVTHT--RMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRKSLV 177 (292)
T ss_pred HHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceeccccc--ccccccc
Confidence 9987544 4789999999999999999999 8999999999999999999999999999987553221 1223346
Q ss_pred ccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHHH
Q 001544 933 ATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAK 1012 (1057)
Q Consensus 933 ~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1057)
++.+|+|||...+..++.++|+||+|+++|||++|+.||...... .. ......... ......
T Consensus 178 ~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~--~~------------~~~~~~~~~----~~~~~~ 239 (292)
T cd06657 178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KA------------MKMIRDNLP----PKLKNL 239 (292)
T ss_pred cCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HH------------HHHHHhhCC----cccCCc
Confidence 788999999988888899999999999999999999998641110 00 001100000 001111
Q ss_pred HHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1013 EQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1013 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
..++..+.+++.+||..+|.+||++.|++++
T Consensus 240 ~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 240 HKVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred ccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 2345678899999999999999999999985
No 331
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=5.7e-33 Score=313.80 Aligned_cols=271 Identities=23% Similarity=0.258 Sum_probs=200.9
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeecc----CCee
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSN----EDFK 840 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 840 (1057)
..+|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 467889999999999999999854 69999999986542 2345677889999999999999999998753 3568
Q ss_pred EEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccccccccc
Q 001544 841 ALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLI 920 (1057)
Q Consensus 841 ~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 920 (1057)
++||||+. |+|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||++++++.+||+|||++....
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 158 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQ-PLTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMARGLS 158 (334)
T ss_pred EEEEehhh-hhHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEecccccceeec
Confidence 99999996 58998886654 4899999999999999999999 8999999999999999999999999999997653
Q ss_pred CCCCc--cccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhh--ccc-----
Q 001544 921 GEDQS--MTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVND--FLP----- 990 (1057)
Q Consensus 921 ~~~~~--~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~--~~~----- 990 (1057)
..... .......++..|+|||.+.. ..++.++||||+||++|||++|+.||....... ........ ..+
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~-~~~~~~~~~g~~~~~~~~ 237 (334)
T cd07855 159 SSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVH-QLKLILSVLGSPSEEVLN 237 (334)
T ss_pred ccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHH-HHHHHHHHhCCChhHhhh
Confidence 22211 11233467889999998755 458899999999999999999999986532111 00000000 000
Q ss_pred ----hhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 991 ----ISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 991 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
.......+..............+..+.++.+++.+|++.+|++||++.+++++-
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~ 295 (334)
T cd07855 238 RIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHP 295 (334)
T ss_pred hhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhCh
Confidence 001111110000000000111133578899999999999999999999999864
No 332
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.1e-32 Score=304.87 Aligned_cols=266 Identities=24% Similarity=0.321 Sum_probs=200.1
Q ss_pred CCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccC--CeeEEEEE
Q 001544 771 FSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNE--DFKALILE 845 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV~E 845 (1057)
|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|++++++++|||++++++++.+. +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567889999999999999866 58999999997653 33456788999999999999999999999887 89999999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
|+++ +|.+++......+++.++..++.|+++|++||| +.+++|+||+|+||++++++.+|++|||.+........
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~- 155 (287)
T cd07840 81 YMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS- 155 (287)
T ss_pred cccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc-
Confidence 9975 899888776567999999999999999999999 89999999999999999999999999999987643221
Q ss_pred cccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhh---hccchhHH-------
Q 001544 926 MTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVN---DFLPISMM------- 994 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~---~~~~~~~~------- 994 (1057)
.......++..|+|||.+.+ ..++.++||||||+++|||++|+.||....... ....... ........
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07840 156 ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELE-QLEKIFELCGSPTDENWPGVSKLPW 234 (287)
T ss_pred ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCchhhccccccchh
Confidence 12233456788999997654 457899999999999999999999986532111 0110000 00000000
Q ss_pred -HhhhcccccccchhhHHHHH-HHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 995 -KIIDANLLITEDKHFAAKEQ-CASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 995 -~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
........... ........ ++.++.+++.+|+..+|++||++++++++
T Consensus 235 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 235 FENLKPKKPYKR-RLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred hhhccccccchh-HHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00000000000 00011112 36789999999999999999999999875
No 333
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=8.9e-33 Score=303.69 Aligned_cols=242 Identities=22% Similarity=0.304 Sum_probs=187.7
Q ss_pred eeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHH---HhcCCCCceeEeeeeccCCeeEEEEEEcc
Q 001544 776 LIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVM---KSIRHRNLTKIISSCSNEDFKALILEYMR 848 (1057)
Q Consensus 776 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 848 (1057)
+||+|+||.||+|... +++.||+|.+.... ......+.+|..++ ...+||+|+.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999864 68999999885432 12223334444433 33479999999999999999999999999
Q ss_pred CCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcccc
Q 001544 849 NGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQ 928 (1057)
Q Consensus 849 ~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 928 (1057)
+|+|.+++.... .+++.++..++.|++.|++||| +.+|+||||||+||++++++.++++|||++...... ..
T Consensus 81 ~~~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~----~~ 152 (279)
T cd05633 81 GGDLHYHLSQHG-VFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK----KP 152 (279)
T ss_pred CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc----Cc
Confidence 999999887654 4899999999999999999999 999999999999999999999999999998754221 12
Q ss_pred ccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccch
Q 001544 929 TQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDK 1007 (1057)
Q Consensus 929 ~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1057)
....++..|+|||...+ ..++.++||||+||++|||++|..||........ .. ...... ..
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~---------~~~~~~-------~~ 214 (279)
T cd05633 153 HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HE---------IDRMTL-------TV 214 (279)
T ss_pred cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH--HH---------HHHHhh-------cC
Confidence 23468899999998764 5578999999999999999999999875322111 00 000000 00
Q ss_pred hhHHHHHHHHHHHHHHhHcccCCCCCCC-----CHHHHHHH
Q 001544 1008 HFAAKEQCASSVFNLAMECTVESPDERI-----TAKEIVRR 1043 (1057)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 1043 (1057)
....+..++.++.+++.+|+..||++|| +++|+++|
T Consensus 215 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 215 NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred CcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 1111234567889999999999999999 69999987
No 334
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-33 Score=281.01 Aligned_cols=255 Identities=22% Similarity=0.263 Sum_probs=203.3
Q ss_pred HHHhCCCCCC-ceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhc-CCCCceeEeeeecc----C
Q 001544 765 FQATNGFSEN-NLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSI-RHRNLTKIISSCSN----E 837 (1057)
Q Consensus 765 ~~~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~ 837 (1057)
...+++|++. ++||-|-.|.|..+..+ +|+.+|+|++... ....+|++..-+. .|||||.+++.|+. .
T Consensus 57 ~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~r 131 (400)
T KOG0604|consen 57 YSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGR 131 (400)
T ss_pred ccchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCc
Confidence 3456777654 68999999999998644 7999999998532 2345788876555 69999999998754 4
Q ss_pred CeeEEEEEEccCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC---CCCcEEEEcc
Q 001544 838 DFKALILEYMRNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD---DNMVAHLSDF 913 (1057)
Q Consensus 838 ~~~~lV~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~---~~~~~kl~Df 913 (1057)
+...+|||.|+||.|...+++.+ ..+++.++..|+.||+.|+.||| +..|.||||||+|+|.. .+..+|++||
T Consensus 132 kcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~na~lKLtDf 208 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPNAPLKLTDF 208 (400)
T ss_pred eeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHH---hcchhhccCChhheeeecCCCCcceEeccc
Confidence 56779999999999999998766 56999999999999999999999 99999999999999996 4568999999
Q ss_pred cccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhH
Q 001544 914 GIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISM 993 (1057)
Q Consensus 914 g~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 993 (1057)
|+|+.-. ..........|+.|.|||++...+++...|+||+||++|-|+.|.+||....... .+..+
T Consensus 209 GFAK~t~---~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a----------ispgM 275 (400)
T KOG0604|consen 209 GFAKETQ---EPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA----------ISPGM 275 (400)
T ss_pred ccccccC---CCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc----------CChhH
Confidence 9998632 2334455678999999999999999999999999999999999999997632211 12223
Q ss_pred HHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 994 MKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 994 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
...+.......+ .+.+..++++.+++|+.++..+|.+|.|..|++.|
T Consensus 276 k~rI~~gqy~FP---~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 276 KRRIRTGQYEFP---EPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred HhHhhccCccCC---ChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 333322222222 23455778899999999999999999999999876
No 335
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.2e-32 Score=305.92 Aligned_cols=268 Identities=22% Similarity=0.268 Sum_probs=196.0
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccch--hHHHHHHHHHHHHHhcC-CCCceeEeeeeccCCe-----
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHE--RAFKSFDTECEVMKSIR-HRNLTKIISSCSNEDF----- 839 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~----- 839 (1057)
++|+..+.||+|+||.||+|... +++.||||+++.... .....+.+|++++++++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 36888899999999999999865 689999999865432 23456788999999995 6999999999876655
Q ss_pred eEEEEEEccCCChhHHHhcCC----ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC-CCcEEEEccc
Q 001544 840 KALILEYMRNGSLEKCLYSGN----YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD-NMVAHLSDFG 914 (1057)
Q Consensus 840 ~~lV~E~~~~gsL~~~l~~~~----~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~Dfg 914 (1057)
.|+||||+++ ++.+++.... ..+++.++..++.||++||+||| +++|+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999986 7888876432 35899999999999999999999 999999999999999998 8999999999
Q ss_pred ccccccCCCCccccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhc--cch
Q 001544 915 IAKLLIGEDQSMTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDF--LPI 991 (1057)
Q Consensus 915 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~--~~~ 991 (1057)
.++.+... ........+++.|+|||++.+ ..++.++||||||+++|||++|..||......+... ...... ...
T Consensus 157 ~~~~~~~~--~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~-~~~~~~~~~~~ 233 (295)
T cd07837 157 LGRAFSIP--VKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLL-HIFKLLGTPTE 233 (295)
T ss_pred cceecCCC--ccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHH-HHHHHhCCCCh
Confidence 98765322 112223356788999998765 457899999999999999999999986422111100 000000 000
Q ss_pred h----HHHhhhccccc--ccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 992 S----MMKIIDANLLI--TEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 992 ~----~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
. .....+..... .........+.++.++.+++.+||.++|++||++.|+++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 234 QVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred hhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0 00000000000 0000001113457789999999999999999999999875
No 336
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.9e-32 Score=302.34 Aligned_cols=267 Identities=24% Similarity=0.283 Sum_probs=202.9
Q ss_pred CCCCceeccccCeEEEEEEec-CCcEEEEEEeeccch--hHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 771 FSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHE--RAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
|+..+.||+|++|.||+|... +++.+|+|+++.... .....+.+|++++++++|+||+++++++..++..++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 566789999999999999865 689999999865432 34567888999999999999999999999999999999999
Q ss_pred cCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccc
Q 001544 848 RNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT 927 (1057)
Q Consensus 848 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 927 (1057)
++ ++.+++......+++.++..++.|+++|++||| +.+|+||||||+||++++++.++|+|||.+....... ..
T Consensus 81 ~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--~~ 154 (283)
T cd05118 81 DT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--RP 154 (283)
T ss_pred CC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc--cc
Confidence 75 888888776567999999999999999999999 9999999999999999999999999999997663322 12
Q ss_pred cccccccccccCccccCCC-CCCccchHHHHHHHHHHHhhCCCCCCcccccccch--hhhhhhccchhHHHhhh---cc-
Q 001544 928 QTQTLATLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTL--KHWVNDFLPISMMKIID---AN- 1000 (1057)
Q Consensus 928 ~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~~- 1000 (1057)
.....++..|+|||...+. .++.++|+||+|+++|+|++|+.||......+... ........+.......+ ..
T Consensus 155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd05118 155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYK 234 (283)
T ss_pred ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhh
Confidence 2334577889999988766 78999999999999999999999986532211000 00000000000000000 00
Q ss_pred --c-ccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1001 --L-LITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1001 --~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
. ...........+.++.++.+++.+||++||.+||++.|++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 235 FSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 0 000000112234567889999999999999999999999875
No 337
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=7.1e-33 Score=306.54 Aligned_cols=253 Identities=26% Similarity=0.348 Sum_probs=193.5
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcC-CCCceeEeeeeccCCeeEEEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIR-HRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
+|+..+.||+|+||.||++... +++.||+|.+.... ......+.+|+.++.++. ||||+++++++..++..++||||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 4555688999999999999864 68999999986432 344567889999999996 99999999999888899999999
Q ss_pred ccCCChhHH---Hhc-CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCC
Q 001544 847 MRNGSLEKC---LYS-GNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 922 (1057)
Q Consensus 847 ~~~gsL~~~---l~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 922 (1057)
+.. ++.++ +.. ....+++..+..++.|+++|++|||+ ..+++||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 864 55443 222 23568999999999999999999992 259999999999999999999999999999765321
Q ss_pred CCccccccccccccccCccccCCC---CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhc
Q 001544 923 DQSMTQTQTLATLGYMAPEYGREG---RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDA 999 (1057)
Q Consensus 923 ~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1057)
.......++..|+|||.+.+. .++.++||||+||++|||++|+.||..... ... ...+....
T Consensus 162 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---~~~---------~~~~~~~~ 226 (288)
T cd06616 162 ---IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS---VFD---------QLTQVVKG 226 (288)
T ss_pred ---CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch---HHH---------HHhhhcCC
Confidence 122233578899999998766 688999999999999999999999865210 000 00011000
Q ss_pred ccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1000 NLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1000 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.. ..........++.++.+++.+||+.+|++|||+.|++++
T Consensus 227 ~~---~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 227 DP---PILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CC---CcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 000011112456789999999999999999999999986
No 338
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.4e-32 Score=307.83 Aligned_cols=276 Identities=23% Similarity=0.338 Sum_probs=200.2
Q ss_pred ceeccc--cCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccC
Q 001544 775 NLIGRG--SFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRN 849 (1057)
Q Consensus 775 ~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 849 (1057)
..||+| +||+||+|... +|+.||||++.... ....+.+.+|+.+++.++||||++++++|..++..++|+||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 456666 99999999864 79999999986432 34457889999999999999999999999999999999999999
Q ss_pred CChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccc-
Q 001544 850 GSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT- 927 (1057)
Q Consensus 850 gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~- 927 (1057)
+++.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++++||+.+...........
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 99999887643 35889999999999999999999 99999999999999999999999999986643321111110
Q ss_pred ----cccccccccccCccccCCC--CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhh--------hhhhccchhH
Q 001544 928 ----QTQTLATLGYMAPEYGREG--RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKH--------WVNDFLPISM 993 (1057)
Q Consensus 928 ----~~~~~~t~~y~aPE~~~~~--~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~--------~~~~~~~~~~ 993 (1057)
.....++..|+|||++.+. .++.++||||+||++|||++|+.||............ |.....+...
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEE 240 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhh
Confidence 0112245579999998763 4789999999999999999999999764322111000 0000000000
Q ss_pred HHhhhc-----------c-------cccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH--HHHhHHHHhh
Q 001544 994 MKIIDA-----------N-------LLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR--LLKIRDFLLR 1053 (1057)
Q Consensus 994 ~~~~~~-----------~-------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~--L~~i~~~~~~ 1053 (1057)
....+. . .........+....++..+.+++.+||+.||++|||+.|+++| ++.++....+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~~~~ 320 (328)
T cd08226 241 SRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQTQG 320 (328)
T ss_pred hhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHHhccc
Confidence 000000 0 0000111222334577889999999999999999999999865 4555554333
No 339
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.5e-32 Score=304.88 Aligned_cols=269 Identities=23% Similarity=0.290 Sum_probs=196.5
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
++|+..+.||+|++|+||+|..+ +|+.||+|.+.... ......+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46888999999999999999865 68999999985432 2334678889999999999999999999999999999999
Q ss_pred EccCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC-CCcEEEEcccccccccCCC
Q 001544 846 YMRNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD-NMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~Dfg~a~~~~~~~ 923 (1057)
|+++ ++.+++.... ...++..+..++.||+.||+||| +++++||||+|+||++++ ++.+|++|||++......
T Consensus 82 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~- 156 (294)
T PLN00009 82 YLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP- 156 (294)
T ss_pred cccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEcccccccccCCC-
Confidence 9964 7877765433 34688888999999999999999 899999999999999985 567999999999754221
Q ss_pred CccccccccccccccCccccCCC-CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhh--hhccchhHHH---hh
Q 001544 924 QSMTQTQTLATLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWV--NDFLPISMMK---II 997 (1057)
Q Consensus 924 ~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~--~~~~~~~~~~---~~ 997 (1057)
........++..|+|||++.+. .++.++||||+|+++|||+||+.||......+....... .......+.. ..
T Consensus 157 -~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (294)
T PLN00009 157 -VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLP 235 (294)
T ss_pred -ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccch
Confidence 1122334568899999987654 578999999999999999999999865322111100000 0000000000 00
Q ss_pred h---cccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 998 D---ANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 998 ~---~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
+ ..............+..+.++.+++.+|++.+|++||++.+++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 236 DYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred hhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 000000000001112346778999999999999999999999975
No 340
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.4e-32 Score=298.89 Aligned_cols=249 Identities=27% Similarity=0.429 Sum_probs=204.3
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
+|+..+.||+|+||.||+|... ++..||+|++.... ......+.+|++++++++|||++++++.+..++..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4778899999999999999865 68999999996543 25567789999999999999999999999999999999999
Q ss_pred ccCCChhHHHhcC---CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC
Q 001544 847 MRNGSLEKCLYSG---NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 847 ~~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 923 (1057)
+++++|.+++... ...+++.++..++.++++|++||| +.+++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 9999999998765 367999999999999999999999 8999999999999999999999999999997653222
Q ss_pred CccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccccc
Q 001544 924 QSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLI 1003 (1057)
Q Consensus 924 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1057)
.......+++.|+|||...+..++.++|+||+|+++|+|++|+.||...... ... ........
T Consensus 158 --~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-----~~~--------~~~~~~~~-- 220 (258)
T cd08215 158 --DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL-----ELA--------LKILKGQY-- 220 (258)
T ss_pred --ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH-----HHH--------HHHhcCCC--
Confidence 1223346788999999988888999999999999999999999998652111 000 00110000
Q ss_pred ccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1004 TEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1004 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.+.+..++.++.+++.+||..+|++||++.|++++
T Consensus 221 -----~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 221 -----PPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred -----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00112456778999999999999999999999875
No 341
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2.1e-32 Score=298.53 Aligned_cols=251 Identities=23% Similarity=0.335 Sum_probs=199.1
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc-----chhHHHHHHHHHHHHHhcCCCCceeEeeeeccC--Cee
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ-----HERAFKSFDTECEVMKSIRHRNLTKIISSCSNE--DFK 840 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 840 (1057)
.+|++.+.||+|+||.||+|... ++..||+|++... .......+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 46888999999999999999864 6899999987432 223456889999999999999999999998653 567
Q ss_pred EEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccccccccc
Q 001544 841 ALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLI 920 (1057)
Q Consensus 841 ~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 920 (1057)
++|+||+++++|.+++.... .+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||.++...
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 157 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQ 157 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECccccccccc
Confidence 89999999999999987654 4889999999999999999999 9999999999999999999999999999997653
Q ss_pred CCCC-ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhc
Q 001544 921 GEDQ-SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDA 999 (1057)
Q Consensus 921 ~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1057)
.... ........++..|+|||...+..++.++|+|||||++||+++|+.||......+ ...+...
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-------------~~~~~~~- 223 (264)
T cd06653 158 TICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA-------------AIFKIAT- 223 (264)
T ss_pred cccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH-------------HHHHHHc-
Confidence 2111 111223457889999999988889999999999999999999999986521110 0011110
Q ss_pred ccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1000 NLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1000 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
. ......+..+++++.+++.+|+. +|.+||++.+++.|
T Consensus 224 --~---~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 224 --Q---PTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred --C---CCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 0 00111223456789999999999 57999999998875
No 342
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7e-33 Score=331.83 Aligned_cols=256 Identities=29% Similarity=0.468 Sum_probs=210.7
Q ss_pred CCCCCceeccccCeEEEEEEec--------CCcEEEEEEeeccc-hhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCCe
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ--------NGIEVAVKTFDLQH-ERAFKSFDTECEVMKSI-RHRNLTKIISSCSNEDF 839 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 839 (1057)
+..+.+.+|+|.||.||+|... ....||||.++... ..+.+++..|+++|+.+ +|+||+.++|+|...+.
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~ 376 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGP 376 (609)
T ss_pred hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCc
Confidence 3455569999999999999743 14679999986443 35678999999999999 69999999999999999
Q ss_pred eEEEEEEccCCChhHHHhcCC---------------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC
Q 001544 840 KALILEYMRNGSLEKCLYSGN---------------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD 904 (1057)
Q Consensus 840 ~~lV~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~ 904 (1057)
.++|+||++.|+|.++++..+ ..++....+.++.|||.|++||+ +.++||||+.++|||+.+
T Consensus 377 ~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~---~~~~vHRDLAaRNVLi~~ 453 (609)
T KOG0200|consen 377 LYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA---SVPCVHRDLAARNVLITK 453 (609)
T ss_pred eEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh---hCCccchhhhhhhEEecC
Confidence 999999999999999998877 45888999999999999999999 999999999999999999
Q ss_pred CCcEEEEcccccccccCCCCcccc-ccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchh
Q 001544 905 NMVAHLSDFGIAKLLIGEDQSMTQ-TQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLK 982 (1057)
Q Consensus 905 ~~~~kl~Dfg~a~~~~~~~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~ 982 (1057)
+..+||+|||+|+.....+.+... +...-...|||||.+....++.|+|||||||++||++| |..||.+....
T Consensus 454 ~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~----- 528 (609)
T KOG0200|consen 454 NKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT----- 528 (609)
T ss_pred CCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH-----
Confidence 999999999999976444433322 11113457999999999999999999999999999999 67787552111
Q ss_pred hhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHh
Q 001544 983 HWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKI 1047 (1057)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 1047 (1057)
....+ ....+.+...+..|+.+++++|+.||+.+|++||++.|+++.++..
T Consensus 529 --------~~l~~------~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 529 --------EELLE------FLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred --------HHHHH------HHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 01111 1223345556678899999999999999999999999999999884
No 343
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=1.4e-32 Score=307.69 Aligned_cols=271 Identities=22% Similarity=0.311 Sum_probs=195.9
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCC------
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNED------ 838 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 838 (1057)
.++|+..+.||+|+||.||+|... +++.||||.+.... ......+.+|++++++++||||+++++++...+
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 457889999999999999999865 68999999985432 222345678999999999999999999886543
Q ss_pred --eeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccccc
Q 001544 839 --FKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIA 916 (1057)
Q Consensus 839 --~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 916 (1057)
..++||||+.+ ++.+.+......+++.++..++.|++.|++||| +.+++||||||+||+++.++.+||+|||.+
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~ 166 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFGLA 166 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEECcCCCc
Confidence 45999999965 888888766656899999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCCc--cccccccccccccCccccCCC-CCCccchHHHHHHHHHHHhhCCCCCCccccccc-chhhhhhhccchh
Q 001544 917 KLLIGEDQS--MTQTQTLATLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEM-TLKHWVNDFLPIS 992 (1057)
Q Consensus 917 ~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~ 992 (1057)
..+...... .......++..|+|||.+.+. .++.++||||||+++|||++|+.||........ ..........+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (310)
T cd07865 167 RAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPE 246 (310)
T ss_pred ccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 765322211 112234567889999987654 368899999999999999999999864221100 0000000000000
Q ss_pred HH------HhhhcccccccchhhHHHH-----HHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 993 MM------KIIDANLLITEDKHFAAKE-----QCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 993 ~~------~~~~~~~~~~~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.. +..+..... ......... .....+.+++.+|+..||++|||+.|+++|
T Consensus 247 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 247 VWPGVDKLELFKKMELP-QGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred hcccccchhhhhhccCC-CccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 00 000000000 000000000 123567899999999999999999999875
No 344
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.1e-32 Score=306.03 Aligned_cols=253 Identities=25% Similarity=0.318 Sum_probs=196.8
Q ss_pred hCCCCCCceeccccCeEEEEEEecC-CcEEEEEEeeccc-hhHHHHHHHHHHHHHhcC-CCCceeEeeeeccCCeeEEEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQN-GIEVAVKTFDLQH-ERAFKSFDTECEVMKSIR-HRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~ 844 (1057)
.++|++.+.||+|+||.||+|..++ ++.||||+++... ......+.+|++++.+.. ||||+++++++.++...++||
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 3568888999999999999998764 8999999996543 233456677887777775 999999999999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCC-CCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYS-APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 923 (1057)
||+.+ ++.++.......+++..+..++.|+++|++||| + .+|+||||+|+||++++++.+||+|||.+..+....
T Consensus 94 e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~ 169 (296)
T cd06618 94 ELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLK---EKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK 169 (296)
T ss_pred eccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCC
Confidence 99854 787777665557899999999999999999999 6 589999999999999999999999999987653221
Q ss_pred CccccccccccccccCccccCCCC----CCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhc
Q 001544 924 QSMTQTQTLATLGYMAPEYGREGR----VSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDA 999 (1057)
Q Consensus 924 ~~~~~~~~~~t~~y~aPE~~~~~~----~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1057)
......++..|+|||.+.+.. ++.++||||||+++|||++|+.||........... .....
T Consensus 170 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~------------~~~~~ 234 (296)
T cd06618 170 ---AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLT------------KILQE 234 (296)
T ss_pred ---cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHH------------HHhcC
Confidence 122335678899999886554 78899999999999999999999864211111111 11111
Q ss_pred ccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 1000 NLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1000 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
... ..+....++.++.+++.+||+.||++||++.+++++-
T Consensus 235 ~~~-----~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 235 EPP-----SLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred CCC-----CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 000 0011113466789999999999999999999998874
No 345
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.8e-32 Score=297.20 Aligned_cols=248 Identities=31% Similarity=0.454 Sum_probs=203.4
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccch--hHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHE--RAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
+|+..+.||+|++|.||+|... +++.||+|.+..... .....+.+|++++++++|||++++++++.++...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4778899999999999999765 688999999965543 4567899999999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 847 MRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
+++++|.+++... ..+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++|+|||.+........
T Consensus 81 ~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 154 (254)
T cd06627 81 AENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK-- 154 (254)
T ss_pred CCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc--
Confidence 9999999988765 45899999999999999999999 99999999999999999999999999999987643222
Q ss_pred ccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccc
Q 001544 927 TQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITED 1006 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1057)
......++..|+|||...+..++.++|||++|+++|+|++|+.||..... .... ..... .
T Consensus 155 ~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~----~~~~---------~~~~~-------~ 214 (254)
T cd06627 155 DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP----MAAL---------FRIVQ-------D 214 (254)
T ss_pred cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH----HHHH---------HHHhc-------c
Confidence 12334578899999998887789999999999999999999999865221 0000 00000 0
Q ss_pred hhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1007 KHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.....+..++.++.+++.+|+..+|++||++.|++.+
T Consensus 215 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 215 DHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred CCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence 0111122346778999999999999999999999864
No 346
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.8e-32 Score=312.14 Aligned_cols=266 Identities=21% Similarity=0.243 Sum_probs=198.0
Q ss_pred HhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc--chhHHHHHHHHHHHHHhcCCCCceeEeeeeccC------
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ--HERAFKSFDTECEVMKSIRHRNLTKIISSCSNE------ 837 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 837 (1057)
..++|+..+.||+|+||.||+|... +++.||||++... .......+.+|++++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4578999999999999999999854 7899999998542 233446677899999999999999999987543
Q ss_pred CeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccc
Q 001544 838 DFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAK 917 (1057)
Q Consensus 838 ~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~ 917 (1057)
...|+||||+++ +|.+.+... ++..++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.++
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 166 (353)
T cd07850 94 QDVYLVMELMDA-NLCQVIQMD---LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 166 (353)
T ss_pred CcEEEEEeccCC-CHHHHHhhc---CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCccce
Confidence 357999999965 888877543 888999999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhcc--chhHHH
Q 001544 918 LLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFL--PISMMK 995 (1057)
Q Consensus 918 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~ 995 (1057)
..... .......++..|+|||.+.+..++.++||||+||++|+|++|+.||...... ..+........ +.....
T Consensus 167 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~ 242 (353)
T cd07850 167 TAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHI-DQWNKIIEQLGTPSDEFMS 242 (353)
T ss_pred eCCCC---CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHhcCCCCHHHHH
Confidence 65321 1223345788999999999889999999999999999999999998642111 00100000000 000111
Q ss_pred hhh--------ccccccc-------------chhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 996 IID--------ANLLITE-------------DKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 996 ~~~--------~~~~~~~-------------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
..+ ....... ..........+.++.+++.+|++.||++|||+.|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 243 RLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000 0000000 00000011345678999999999999999999999976
No 347
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.3e-32 Score=298.75 Aligned_cols=247 Identities=24% Similarity=0.339 Sum_probs=202.7
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
+|++.+.||+|+||.||+|... +++.+|+|.+.... ......+.+|++++++++||||+++++++.+....++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4778899999999999999754 68899999986532 34456778899999999999999999999999999999999
Q ss_pred ccCCChhHHHhcC---CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC
Q 001544 847 MRNGSLEKCLYSG---NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 847 ~~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 923 (1057)
+++++|.+++... ...+++..+..++.|+++|++||| +.+++||||+|+||+++.++.+|++|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 9999999988662 245899999999999999999999 999999999999999999999999999999876332
Q ss_pred CccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccccc
Q 001544 924 QSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLI 1003 (1057)
Q Consensus 924 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1057)
......++..|+|||...+..++.++|+||+|+++|||++|+.||......+ . ...+....
T Consensus 157 ---~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~--~------------~~~~~~~~-- 217 (256)
T cd08530 157 ---MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD--L------------RYKVQRGK-- 217 (256)
T ss_pred ---CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--H------------HHHHhcCC--
Confidence 2223457889999999988889999999999999999999999986522110 0 00110000
Q ss_pred ccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1004 TEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1004 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
..+....++.++.+++.+|++.+|++||++.|++++
T Consensus 218 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 218 ----YPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred ----CCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 011122456779999999999999999999999875
No 348
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.3e-32 Score=302.57 Aligned_cols=244 Identities=23% Similarity=0.332 Sum_probs=194.1
Q ss_pred eccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCCCh
Q 001544 777 IGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNGSL 852 (1057)
Q Consensus 777 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL 852 (1057)
||+|+||+||+|... +|+.||+|.+.... ......+.+|++++++++||||+++++++...+..|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 699999999999754 68999999986432 22345667899999999999999999999999999999999999999
Q ss_pred hHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccccc
Q 001544 853 EKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQT 931 (1057)
Q Consensus 853 ~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 931 (1057)
.+++.... ..+++.++..++.|++.|+.||| +.+++||||+|+||++++++.++++|||.+..... .......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~---~~~~~~~ 154 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG---GKKIKGR 154 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhhcc---CCccccc
Confidence 99987654 35899999999999999999999 99999999999999999999999999999876532 1222334
Q ss_pred cccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHH
Q 001544 932 LATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAA 1011 (1057)
Q Consensus 932 ~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1057)
.++..|+|||...+..++.++||||+|+++|||++|+.||....... ... ++...... .....
T Consensus 155 ~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~------------~~~~~~~~----~~~~~ 217 (277)
T cd05577 155 AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV-EKE------------ELKRRTLE----MAVEY 217 (277)
T ss_pred cCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc-cHH------------HHHhcccc----ccccC
Confidence 57789999999888889999999999999999999999986532210 000 00000000 01111
Q ss_pred HHHHHHHHHHHHhHcccCCCCCCC-----CHHHHHHH
Q 001544 1012 KEQCASSVFNLAMECTVESPDERI-----TAKEIVRR 1043 (1057)
Q Consensus 1012 ~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 1043 (1057)
+...++.+.+++.+||+.+|++|| ++.++++|
T Consensus 218 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 218 PDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREH 254 (277)
T ss_pred CccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhC
Confidence 223467789999999999999999 77777664
No 349
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=2.4e-32 Score=304.67 Aligned_cols=271 Identities=25% Similarity=0.320 Sum_probs=200.9
Q ss_pred HHhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCC----
Q 001544 766 QATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNED---- 838 (1057)
Q Consensus 766 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 838 (1057)
...++|++.+.||+|+||.||+|..+ +|+.||||+++... ......+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 35568999999999999999999875 58999999996543 223456778999999999999999999886654
Q ss_pred ------eeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEc
Q 001544 839 ------FKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSD 912 (1057)
Q Consensus 839 ------~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 912 (1057)
..++|+||+++ ++.+.+......+++.++..++.|++.||+||| +.+|+||||||+||++++++.+||+|
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~kl~d 159 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIKLAD 159 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCcEEeCc
Confidence 78999999986 777777665556899999999999999999999 89999999999999999999999999
Q ss_pred ccccccccCCCCccccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhh---hc
Q 001544 913 FGIAKLLIGEDQSMTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVN---DF 988 (1057)
Q Consensus 913 fg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~---~~ 988 (1057)
||.+........ .......++..|+|||...+ ..++.++||||+||++|||++|+.||...... ........ ..
T Consensus 160 fg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~-~~~~~~~~~~~~~ 237 (302)
T cd07864 160 FGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQEL-AQLELISRLCGSP 237 (302)
T ss_pred ccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCC
Confidence 999986533221 22223345778999997754 45789999999999999999999998652211 11111100 00
Q ss_pred cchhHHHhh--------hcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 989 LPISMMKII--------DANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 989 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.+....... +....... ........++..+.+++.+||+.+|++||++.+++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 238 CPAVWPDVIKLPYFNTMKPKKQYRR-RLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred Chhhccccccccccccccccccccc-chhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000000000 00000000 0001112356789999999999999999999999865
No 350
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.4e-32 Score=310.81 Aligned_cols=273 Identities=23% Similarity=0.271 Sum_probs=202.5
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc--chhHHHHHHHHHHHHHhcCCCCceeEeeeeccC-----Ce
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ--HERAFKSFDTECEVMKSIRHRNLTKIISSCSNE-----DF 839 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 839 (1057)
..+|.+.+.||+|+||+||+|+.. +++.||||.++.. .......+.+|+++++.++||||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 457889999999999999999754 6899999998643 233345677899999999999999999987543 35
Q ss_pred eEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccc
Q 001544 840 KALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 919 (1057)
Q Consensus 840 ~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 919 (1057)
.++|+||+. ++|.+++.... .+++..+..++.|++.|++||| +++++||||||+||+++.++.+||+|||+++..
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 158 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQ-TLSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLARTT 158 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCcccccc
Confidence 799999996 68988886554 5899999999999999999999 999999999999999999999999999999865
Q ss_pred cCCCCccccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhh---hh--------
Q 001544 920 IGEDQSMTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWV---ND-------- 987 (1057)
Q Consensus 920 ~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~---~~-------- 987 (1057)
.... .......++..|+|||.+.. ..++.++|||||||++|||++|+.||......+ ...... ..
T Consensus 159 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07858 159 SEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVH-QLKLITELLGSPSEEDLGF 235 (337)
T ss_pred CCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHH-HHHHHHHHhCCCChHHhhh
Confidence 3221 12233457889999998754 468899999999999999999999986532110 000000 00
Q ss_pred ccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH--HHHhH
Q 001544 988 FLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR--LLKIR 1048 (1057)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~--L~~i~ 1048 (1057)
.......+.................+.++.++.+++.+|++.+|++|||++|+++| ++.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~ 298 (337)
T cd07858 236 IRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH 298 (337)
T ss_pred cCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence 00000111111000000000111123467889999999999999999999999998 55543
No 351
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-33 Score=282.56 Aligned_cols=250 Identities=25% Similarity=0.327 Sum_probs=204.2
Q ss_pred HhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEE
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKAL 842 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 842 (1057)
..++|...++||+|.||+|..++-+ +|+.+|+|++++.. ....+.-..|-++++..+||.+..+.-.|...+..|+
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence 3467888999999999999999855 79999999997653 2334555678999999999999999888999999999
Q ss_pred EEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCC
Q 001544 843 ILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 922 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 922 (1057)
||||+.||.|.-++...+ .+++....-+-..|+.||.||| +++||.||+|.+|.++|++|++||+|||+++.- .
T Consensus 246 VMeyanGGeLf~HLsrer-~FsE~RtRFYGaEIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~--I 319 (516)
T KOG0690|consen 246 VMEYANGGELFFHLSRER-VFSEDRTRFYGAEIVSALGYLH---SRNIVYRDLKLENLLLDKDGHIKITDFGLCKEE--I 319 (516)
T ss_pred EEEEccCceEeeehhhhh-cccchhhhhhhHHHHHHhhhhh---hCCeeeeechhhhheeccCCceEeeecccchhc--c
Confidence 999999999998887654 4788888888999999999999 999999999999999999999999999999742 2
Q ss_pred CCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccc
Q 001544 923 DQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLL 1002 (1057)
Q Consensus 923 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1057)
.........+||+.|.|||++....|+.++|-|.+||++|||++|+.||..... ....+.+-..
T Consensus 320 ~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh--------------~kLFeLIl~e-- 383 (516)
T KOG0690|consen 320 KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH--------------EKLFELILME-- 383 (516)
T ss_pred cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccch--------------hHHHHHHHhh--
Confidence 233445567899999999999999999999999999999999999999865211 1111111110
Q ss_pred cccchhhHHHHHHHHHHHHHHhHcccCCCCCCC-----CHHHHHHH
Q 001544 1003 ITEDKHFAAKEQCASSVFNLAMECTVESPDERI-----TAKEIVRR 1043 (1057)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 1043 (1057)
....+...+++...++...+..||.+|. .++||.+|
T Consensus 384 -----d~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 384 -----DLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred -----hccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 1112235677889999999999999998 56666655
No 352
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=2.1e-32 Score=310.01 Aligned_cols=269 Identities=22% Similarity=0.291 Sum_probs=198.0
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccC------C
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNE------D 838 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 838 (1057)
..+|...+.||+|+||.||+|... +|+.||||++.... ......+.+|++++++++||||+++++++... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 478999999999999999999854 68999999986432 22345678999999999999999999988654 3
Q ss_pred eeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccccccc
Q 001544 839 FKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 918 (1057)
Q Consensus 839 ~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 918 (1057)
..++|+||+.. ++.++.. ..+++..+..++.|+++|++||| +.+++||||||+||+++.++.+|++|||+++.
T Consensus 94 ~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~ 166 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG---HPLSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGLARH 166 (342)
T ss_pred eEEEEeccccc-CHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCCCCcC
Confidence 46899999964 7776542 34889999999999999999999 89999999999999999999999999999875
Q ss_pred ccCCCCccccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhh--hccchhHHH
Q 001544 919 LIGEDQSMTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVN--DFLPISMMK 995 (1057)
Q Consensus 919 ~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~--~~~~~~~~~ 995 (1057)
... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||....... ....... ........+
T Consensus 167 ~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~ 240 (342)
T cd07879 167 ADA-----EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGPEFVQ 240 (342)
T ss_pred CCC-----CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHH
Confidence 421 1223457888999998766 468899999999999999999999987522111 0100000 000111111
Q ss_pred hhhcc--------cccccchh-hHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH--HHHhHH
Q 001544 996 IIDAN--------LLITEDKH-FAAKEQCASSVFNLAMECTVESPDERITAKEIVRR--LLKIRD 1049 (1057)
Q Consensus 996 ~~~~~--------~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~--L~~i~~ 1049 (1057)
..+.. ........ ....+..+.++.+++.+||+.||++||++.|+++| ++..++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 241 KLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred HhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 11000 00000000 01112345678999999999999999999999977 666543
No 353
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=2.8e-32 Score=297.26 Aligned_cols=243 Identities=27% Similarity=0.380 Sum_probs=196.4
Q ss_pred eccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCCCh
Q 001544 777 IGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNGSL 852 (1057)
Q Consensus 777 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL 852 (1057)
||+|++|.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.++...++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999865 58999999986432 23457799999999999999999999999999999999999999999
Q ss_pred hHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcccccccc
Q 001544 853 EKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL 932 (1057)
Q Consensus 853 ~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 932 (1057)
.+++.+.. .+++.++..++.|+++|++|+| +.+++|+||+|+||+++.++.++++|||.+....... ......
T Consensus 81 ~~~l~~~~-~l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~~~~ 153 (262)
T cd05572 81 WTILRDRG-LFDEYTARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWTFC 153 (262)
T ss_pred HHHHhhcC-CCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---cccccc
Confidence 99997654 4889999999999999999999 9999999999999999999999999999998663221 222345
Q ss_pred ccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHHH
Q 001544 933 ATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAK 1012 (1057)
Q Consensus 933 ~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1057)
++..|+|||...+..++.++|+||+|+++|||++|..||........ .. .....+.. .....+
T Consensus 154 ~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~--------~~~~~~~~------~~~~~~ 216 (262)
T cd05572 154 GTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPM---EI--------YNDILKGN------GKLEFP 216 (262)
T ss_pred CCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHH---HH--------HHHHhccC------CCCCCC
Confidence 78899999998888899999999999999999999999876322100 00 11111000 011111
Q ss_pred HHHHHHHHHHHhHcccCCCCCCCC-----HHHHHHH
Q 001544 1013 EQCASSVFNLAMECTVESPDERIT-----AKEIVRR 1043 (1057)
Q Consensus 1013 ~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~~ 1043 (1057)
..++.++.+++.+||+.+|++||+ ++|+++|
T Consensus 217 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~ 252 (262)
T cd05572 217 NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKH 252 (262)
T ss_pred cccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcC
Confidence 233678999999999999999999 7777764
No 354
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-33 Score=295.43 Aligned_cols=253 Identities=23% Similarity=0.331 Sum_probs=205.3
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc---chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ---HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALI 843 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 843 (1057)
.+.|+.-++||+|+||.||-++.. +|+.+|.|.+.+. ..........|-.+++++..+.||.+--+|+..+..++|
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 346778899999999999999754 6999999988543 233445677899999999999999998889999999999
Q ss_pred EEEccCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCC
Q 001544 844 LEYMRNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 922 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 922 (1057)
+..|.||+|.-++...+ ..+++..++-++.+|+.||++|| ..+||+||+||+|||+|+.|+++|+|.|+|..+..
T Consensus 264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~- 339 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE- 339 (591)
T ss_pred EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeEeeccceEEecCC-
Confidence 99999999988887654 56999999999999999999999 99999999999999999999999999999997733
Q ss_pred CCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccc
Q 001544 923 DQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLL 1002 (1057)
Q Consensus 923 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1057)
.......+||.||||||++.++.|+...|-||+||++|||+.|+.||....... -.+-+|....
T Consensus 340 --g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKv--------------k~eEvdrr~~ 403 (591)
T KOG0986|consen 340 --GKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKV--------------KREEVDRRTL 403 (591)
T ss_pred --CCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhh--------------hHHHHHHHHh
Confidence 233445589999999999999999999999999999999999999987622110 1111222211
Q ss_pred cccchhhHHHHHHHHHHHHHHhHcccCCCCCCC-----CHHHHHHH
Q 001544 1003 ITEDKHFAAKEQCASSVFNLAMECTVESPDERI-----TAKEIVRR 1043 (1057)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 1043 (1057)
.. ....++..+++..++.+..+..||++|. .+.||.+|
T Consensus 404 ~~---~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~H 446 (591)
T KOG0986|consen 404 ED---PEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEH 446 (591)
T ss_pred cc---hhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhC
Confidence 11 1122345678899999999999999998 44555544
No 355
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=2.8e-32 Score=306.71 Aligned_cols=269 Identities=24% Similarity=0.303 Sum_probs=200.2
Q ss_pred HHHHhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc--chhHHHHHHHHHHHHHhcCCCCceeEeeeecc-CCe
Q 001544 764 LFQATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ--HERAFKSFDTECEVMKSIRHRNLTKIISSCSN-EDF 839 (1057)
Q Consensus 764 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 839 (1057)
+...+++|++.+.||+|+||.||+|... +++.||||++... .....+.+.+|++++++++||||+++.+++.. ...
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 3456788999999999999999999755 7999999988542 22345678889999999999999999998865 567
Q ss_pred eEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccc
Q 001544 840 KALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 919 (1057)
Q Consensus 840 ~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 919 (1057)
.++|+||+ +++|.+++... .+++..+..++.|+++|++||| +.+|+||||+|+||++++++.++++|||.+...
T Consensus 85 ~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~ 158 (328)
T cd07856 85 IYFVTELL-GTDLHRLLTSR--PLEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLARIQ 158 (328)
T ss_pred EEEEeehh-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEeECCCCCEEeCcccccccc
Confidence 89999998 56898887643 3788888999999999999999 999999999999999999999999999998754
Q ss_pred cCCCCccccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCccccccc--ch--------hhhhhhc
Q 001544 920 IGEDQSMTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEM--TL--------KHWVNDF 988 (1057)
Q Consensus 920 ~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~--~~--------~~~~~~~ 988 (1057)
.. ......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||........ .. .+|....
T Consensus 159 ~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (328)
T cd07856 159 DP-----QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTI 233 (328)
T ss_pred CC-----CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence 21 1123356788999998765 5689999999999999999999999865321100 00 1111111
Q ss_pred cchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 989 LPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
......+.................+.++.++.+++.+|++.+|++||++.|++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 234 CSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred cchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1111111111000000000001112356789999999999999999999999877
No 356
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=4.6e-32 Score=303.25 Aligned_cols=244 Identities=27% Similarity=0.354 Sum_probs=194.8
Q ss_pred CCCCceeccccCeEEEEEEec-CCcEEEEEEeecc---chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 771 FSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ---HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
|...+.||+|+||+||+|+.. +++.||+|++... .......+.+|++++++++|||++++++++.+++..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 555678999999999999864 6899999998643 233456788899999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 847 MRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
+. |++.+++......+++.++..++.|++.|++||| +.+++||||+|+||+++.++.+||+|||++....
T Consensus 103 ~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~------ 172 (313)
T cd06633 103 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS------ 172 (313)
T ss_pred CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCCcccC------
Confidence 96 5788877766667999999999999999999999 8999999999999999999999999999986431
Q ss_pred ccccccccccccCccccC---CCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccccc
Q 001544 927 TQTQTLATLGYMAPEYGR---EGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLI 1003 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~---~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1057)
......++..|+|||++. .+.++.++|||||||++|||++|+.||....... .. .........
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~--~~-----------~~~~~~~~~- 238 (313)
T cd06633 173 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--AL-----------YHIAQNDSP- 238 (313)
T ss_pred CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH--HH-----------HHHHhcCCC-
Confidence 122346788999999874 4568889999999999999999999976521110 00 000000000
Q ss_pred ccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1004 TEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1004 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
......++..+.+++.+|++.+|++||++.+++++
T Consensus 239 -----~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 239 -----TLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred -----CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00012234568899999999999999999999986
No 357
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=4.1e-32 Score=307.57 Aligned_cols=269 Identities=20% Similarity=0.279 Sum_probs=199.4
Q ss_pred HHHHhCCCCCCceeccccCeEEEEEEe-cCCcEEEEEEeecc--chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCC--
Q 001544 764 LFQATNGFSENNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQ--HERAFKSFDTECEVMKSIRHRNLTKIISSCSNED-- 838 (1057)
Q Consensus 764 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-- 838 (1057)
+....++|++.+.||+|+||.||+|.. .+|+.||||++... .......+.+|++++++++||||+++++++..+.
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07880 10 IWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL 89 (343)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc
Confidence 344567899999999999999999975 47899999998543 2334467889999999999999999999886543
Q ss_pred ----eeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccc
Q 001544 839 ----FKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFG 914 (1057)
Q Consensus 839 ----~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 914 (1057)
..++||||+ +++|.+++... .+++..+..++.|+++|++||| +.+|+||||||+||+++.++.++++|||
T Consensus 90 ~~~~~~~lv~e~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 90 DRFHDFYLVMPFM-GTDLGKLMKHE--KLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred cccceEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecc
Confidence 458999999 67998887643 4899999999999999999999 9999999999999999999999999999
Q ss_pred ccccccCCCCccccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccch----------hh
Q 001544 915 IAKLLIGEDQSMTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTL----------KH 983 (1057)
Q Consensus 915 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~----------~~ 983 (1057)
++..... ......++..|+|||.+.+ ..++.++|+||+|+++|++++|+.||.......... ..
T Consensus 164 ~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 238 (343)
T cd07880 164 LARQTDS-----EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKE 238 (343)
T ss_pred ccccccc-----CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence 9976422 1223456889999998765 458899999999999999999999987532110000 00
Q ss_pred hhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 984 WVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
|............................+.++.++.+++.+|++.||++|||+.+++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 239 FVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred HHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 111100000000000000000000011123456778999999999999999999999854
No 358
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=7.5e-32 Score=298.26 Aligned_cols=265 Identities=25% Similarity=0.303 Sum_probs=196.8
Q ss_pred CCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhc---CCCCceeEeeeeccCCe-----
Q 001544 771 FSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSI---RHRNLTKIISSCSNEDF----- 839 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~----- 839 (1057)
|++.+.||+|+||.||+|+.+ +++.||+|+++... ......+.+|+++++++ +|||++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567789999999999999876 48999999996432 22334566788777766 59999999999987766
Q ss_pred eEEEEEEccCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccccccc
Q 001544 840 KALILEYMRNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 918 (1057)
Q Consensus 840 ~~lV~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 918 (1057)
.+++|||+.+ +|.+++.... ..+++.++..++.|+++||+||| +.+++|+||+|+||++++++.+||+|||.+..
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEeccCccee
Confidence 8999999975 8988886643 35899999999999999999999 89999999999999999999999999999876
Q ss_pred ccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhh-
Q 001544 919 LIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKII- 997 (1057)
Q Consensus 919 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 997 (1057)
..... ......++..|+|||...+..++.++|+|||||++|||++|+.||...... .....+.............
T Consensus 157 ~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07838 157 YSFEM---ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA-DQLDKIFDVIGLPSEEEWPR 232 (287)
T ss_pred ccCCc---ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH-HHHHHHHHHcCCCChHhcCC
Confidence 53221 122334678899999998888999999999999999999999988653221 1111111110000000000
Q ss_pred h----cc--cccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 998 D----AN--LLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 998 ~----~~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
. .. ...............+..+.+++.+||+.||++||++.|+++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 233 NVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred CcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 0 00 0000000111123456788999999999999999999999865
No 359
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=3.5e-32 Score=305.05 Aligned_cols=266 Identities=19% Similarity=0.233 Sum_probs=193.2
Q ss_pred ceeccccCeEEEEEEecCCcEEEEEEeecc--chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCCCh
Q 001544 775 NLIGRGSFGSVYIARLQNGIEVAVKTFDLQ--HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNGSL 852 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL 852 (1057)
+.+|.|+++.||++.. +++.||||+++.. .....+.+.+|++++++++||||+++++++.+.+..+++|||+++|+|
T Consensus 8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l 86 (314)
T cd08216 8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSC 86 (314)
T ss_pred HhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCH
Confidence 3444555555555544 6899999998654 345567899999999999999999999999999999999999999999
Q ss_pred hHHHhcC-CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc-----c
Q 001544 853 EKCLYSG-NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS-----M 926 (1057)
Q Consensus 853 ~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-----~ 926 (1057)
.+++... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+|++|||.+..+...... .
T Consensus 87 ~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~ 163 (314)
T cd08216 87 EDLLKTHFPEGLPELAIAFILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHD 163 (314)
T ss_pred HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccceeecccccccccccc
Confidence 9998754 345889999999999999999999 999999999999999999999999999998765322211 1
Q ss_pred ccccccccccccCccccCC--CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhh--------ccchhHHHh
Q 001544 927 TQTQTLATLGYMAPEYGRE--GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVND--------FLPISMMKI 996 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~--~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 996 (1057)
......++..|+|||++.. ..++.++||||+||++|||++|+.||................ ..+......
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
T cd08216 164 FPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSM 243 (314)
T ss_pred ccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCc
Confidence 1123346778999998865 357889999999999999999999997532221111110000 000000000
Q ss_pred hh-----cccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 997 ID-----ANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 997 ~~-----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
.. .................+.++.+++.+||..+|++|||+.|+++|-
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p 296 (314)
T cd08216 244 SQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHS 296 (314)
T ss_pred CcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCc
Confidence 00 0000000011122234567899999999999999999999999864
No 360
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=3.3e-32 Score=301.47 Aligned_cols=259 Identities=19% Similarity=0.233 Sum_probs=185.3
Q ss_pred hCCCCCCceeccccCeEEEEEEecC----CcEEEEEEeeccchhH-----------HHHHHHHHHHHHhcCCCCceeEee
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQN----GIEVAVKTFDLQHERA-----------FKSFDTECEVMKSIRHRNLTKIIS 832 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~l~~ 832 (1057)
.++|.+.++||+|+||+||+|...+ +..+|+|+........ ......+...+..+.|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 3578999999999999999998653 4567777643322111 011223334456678999999998
Q ss_pred eeccCC----eeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcE
Q 001544 833 SCSNED----FKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVA 908 (1057)
Q Consensus 833 ~~~~~~----~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 908 (1057)
++.... ..++++|++.. ++.+.+... ...++..+..|+.|+++|++||| +.+|+||||||+||+++.++.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~iiHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIH---EHGISHGDIKPENIMVDGNNRG 165 (294)
T ss_pred eeeEecCCceEEEEEEehhcc-CHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCcE
Confidence 765443 44678887644 666655443 23578888999999999999999 9999999999999999999999
Q ss_pred EEEcccccccccCCCCc-----cccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhh
Q 001544 909 HLSDFGIAKLLIGEDQS-----MTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKH 983 (1057)
Q Consensus 909 kl~Dfg~a~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~ 983 (1057)
+|+|||+|+.+...... .......||+.|+|||+..+..++.++||||+||++|||++|+.||............
T Consensus 166 ~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~ 245 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHA 245 (294)
T ss_pred EEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHH
Confidence 99999999876322211 1122346899999999999999999999999999999999999999764221110000
Q ss_pred hhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 984 WVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
. ..+.+..... . ......++..+.+++..|+..+|++||++.++++.+
T Consensus 246 ~--------~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 246 A--------KCDFIKRLHE--G---KIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred h--------HHHHHHHhhh--h---hhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 0 0001100000 0 001134567899999999999999999999999865
No 361
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=2.4e-32 Score=304.86 Aligned_cols=247 Identities=28% Similarity=0.374 Sum_probs=197.1
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc---chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ---HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
.|+..+.||+|+||.||+|+.. ++..||+|.+... ......++.+|+++++.++|+|++++++++..++..++|||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 4666788999999999999865 6889999998642 23345678889999999999999999999999999999999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
|+. |++.+.+......+++.++..++.|++.|++||| +.+++||||+|+||+++.++.++++|||++.....
T Consensus 96 ~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~---- 167 (308)
T cd06634 96 YCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP---- 167 (308)
T ss_pred ccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCcccceeecC----
Confidence 996 5888877665566899999999999999999999 89999999999999999999999999999876422
Q ss_pred cccccccccccccCccccC---CCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccc
Q 001544 926 MTQTQTLATLGYMAPEYGR---EGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLL 1002 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~---~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1057)
.....++..|+|||.+. ...++.++||||+||++|||++|+.||......+ ....+ .....
T Consensus 168 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~------------~~~~~- 231 (308)
T cd06634 168 --ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHI------------AQNES- 231 (308)
T ss_pred --cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH-HHHHH------------hhcCC-
Confidence 12345788999999864 3567889999999999999999999975521110 00000 00000
Q ss_pred cccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHH
Q 001544 1003 ITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLL 1045 (1057)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1045 (1057)
.......++..+.+++.+||+.+|++||++.+++++-.
T Consensus 232 -----~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 232 -----PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred -----CCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence 00011235667899999999999999999999998754
No 362
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=4.2e-32 Score=307.68 Aligned_cols=273 Identities=23% Similarity=0.291 Sum_probs=201.4
Q ss_pred CHHHHHHHhCCCCCCceeccccCeEEEEEEe-cCCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeecc
Q 001544 760 SYLELFQATNGFSENNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSN 836 (1057)
Q Consensus 760 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 836 (1057)
...++...+++|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++++++||||+++++++..
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 3456677889999999999999999999975 478999999986432 2234667889999999999999999998753
Q ss_pred C------CeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEE
Q 001544 837 E------DFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHL 910 (1057)
Q Consensus 837 ~------~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 910 (1057)
. ...++|+|++ +++|.+++... .+++..+..++.|+++|++||| +.+|+||||||+||++++++.+||
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl 161 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 161 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEcCCCCEEE
Confidence 2 3467888887 77998887654 4899999999999999999999 999999999999999999999999
Q ss_pred EcccccccccCCCCccccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhh--h
Q 001544 911 SDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVN--D 987 (1057)
Q Consensus 911 ~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~--~ 987 (1057)
+|||+++.... ......++..|+|||...+ ..++.++||||+||++|||++|+.||....... ....... .
T Consensus 162 ~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~ 235 (345)
T cd07877 162 LDFGLARHTDD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QLKLILRLVG 235 (345)
T ss_pred ecccccccccc-----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhC
Confidence 99999875421 2233467889999998765 567889999999999999999999986422111 1111000 0
Q ss_pred ccchhHHHhhhcc--------cccccchhhH-HHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 988 FLPISMMKIIDAN--------LLITEDKHFA-AKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 988 ~~~~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
..+......+... ........+. .....+.++.+++.+|++.||++||++.|+++|=
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~ 301 (345)
T cd07877 236 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 301 (345)
T ss_pred CCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcCh
Confidence 0000111000000 0000000000 0112456789999999999999999999999873
No 363
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=2.9e-32 Score=307.95 Aligned_cols=274 Identities=24% Similarity=0.286 Sum_probs=206.5
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCC-----eeE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNED-----FKA 841 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 841 (1057)
+|++.+.||+|++|.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4788899999999999999865 58999999986543 344578899999999999999999999987765 789
Q ss_pred EEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccC
Q 001544 842 LILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIG 921 (1057)
Q Consensus 842 lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 921 (1057)
+||||+++ +|.+++.... .+++..+..++.|+++|++||| +.+|+||||||.||+++.++.++|+|||.+.....
T Consensus 81 lv~e~~~~-~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~ 155 (330)
T cd07834 81 IVTELMET-DLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARGVDP 155 (330)
T ss_pred EEecchhh-hHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccCceEeecc
Confidence 99999984 8988887655 6999999999999999999999 99999999999999999999999999999987643
Q ss_pred CCC-ccccccccccccccCccccCCC-CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhh---h--------c
Q 001544 922 EDQ-SMTQTQTLATLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVN---D--------F 988 (1057)
Q Consensus 922 ~~~-~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~---~--------~ 988 (1057)
... ........++..|+|||.+.+. .++.++|+||+|+++|+|++|+.||......+. ...... . .
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~ 234 (330)
T cd07834 156 DEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQ-LNLIVEVLGTPSEEDLKFI 234 (330)
T ss_pred cccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHH-HHHHHHhcCCCChhHhhhc
Confidence 221 1123344678899999998877 789999999999999999999999865322110 000000 0 0
Q ss_pred cchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH--HHHhHH
Q 001544 989 LPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR--LLKIRD 1049 (1057)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~--L~~i~~ 1049 (1057)
........+..................+.++.+++.+||+.+|++||++.+++++ ++.+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 235 TSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred cccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 0000111111100000000111112356789999999999999999999999986 555543
No 364
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.5e-32 Score=300.00 Aligned_cols=244 Identities=26% Similarity=0.374 Sum_probs=194.6
Q ss_pred eccccCeEEEEEEec-CCcEEEEEEeeccch---hHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCCCh
Q 001544 777 IGRGSFGSVYIARLQ-NGIEVAVKTFDLQHE---RAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNGSL 852 (1057)
Q Consensus 777 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL 852 (1057)
||+|+||.||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++.+..++..|+||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999876 499999999865432 4567889999999999999999999999999999999999999999
Q ss_pred hHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC------cc
Q 001544 853 EKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ------SM 926 (1057)
Q Consensus 853 ~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~------~~ 926 (1057)
.+++...+ .+++..+..++.|+++||+||| +.+++||||+|+||++++++.++++|||++........ ..
T Consensus 81 ~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 156 (265)
T cd05579 81 ASLLENVG-SLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEK 156 (265)
T ss_pred HHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccc
Confidence 99987655 5899999999999999999999 99999999999999999999999999999875432211 11
Q ss_pred ccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccc
Q 001544 927 TQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITED 1006 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1057)
......++..|+|||.......+.++||||+|+++||+++|..||...... .+. .......
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-----~~~--------~~~~~~~------ 217 (265)
T cd05579 157 EDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE-----EIF--------QNILNGK------ 217 (265)
T ss_pred cccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-----HHH--------HHHhcCC------
Confidence 223345778899999988888999999999999999999999998652211 000 0000000
Q ss_pred hhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1007 KHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
..++.....+..+.+++.+|++.+|++|||+.++.+.
T Consensus 218 ~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~ 254 (265)
T cd05579 218 IEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEI 254 (265)
T ss_pred cCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHH
Confidence 0111111136788999999999999999999444433
No 365
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=4.4e-32 Score=295.39 Aligned_cols=240 Identities=23% Similarity=0.313 Sum_probs=186.4
Q ss_pred ceeccccCeEEEEEEec-CCcEEEEEEeeccch---hHHHHHHHHHHHH-HhcCCCCceeEeeeeccCCeeEEEEEEccC
Q 001544 775 NLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHE---RAFKSFDTECEVM-KSIRHRNLTKIISSCSNEDFKALILEYMRN 849 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 849 (1057)
+.||+|+||.||+|... +|+.||||+++.... .....+..|..++ .+.+|+|++++++++.+.+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 56999999999999864 689999999864321 2223344555444 455899999999999999999999999999
Q ss_pred CChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccc
Q 001544 850 GSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQT 929 (1057)
Q Consensus 850 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 929 (1057)
++|.+++.... .+++..+..++.|++.||.||| +.+++||||+|+||++++++.++++|||+++.... ..
T Consensus 82 ~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------~~ 151 (260)
T cd05611 82 GDCASLIKTLG-GLPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------NK 151 (260)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccceeccc------cc
Confidence 99999987654 4889999999999999999999 89999999999999999999999999999875321 22
Q ss_pred cccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhh
Q 001544 930 QTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHF 1009 (1057)
Q Consensus 930 ~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1057)
...++..|+|||...+..++.++||||+|+++|||++|..||...... ... ........ ....
T Consensus 152 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~---------~~~~~~~~---~~~~ 214 (260)
T cd05611 152 KFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD-----AVF---------DNILSRRI---NWPE 214 (260)
T ss_pred cCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH-----HHH---------HHHHhccc---CCCC
Confidence 345778899999988888899999999999999999999998642111 000 00000000 0001
Q ss_pred HHHHHHHHHHHHHHhHcccCCCCCCCCHHHHH
Q 001544 1010 AAKEQCASSVFNLAMECTVESPDERITAKEIV 1041 (1057)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl 1041 (1057)
.....++..+.+++.+||+.+|++||++.++.
T Consensus 215 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~ 246 (260)
T cd05611 215 EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQ 246 (260)
T ss_pred cccccCCHHHHHHHHHHccCCHHHccCCCcHH
Confidence 11124577899999999999999999765443
No 366
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.8e-32 Score=322.40 Aligned_cols=271 Identities=19% Similarity=0.206 Sum_probs=190.2
Q ss_pred hCCCCCCceeccccCeEEEEEEecC--CcEEEEEEee-----------------ccchhHHHHHHHHHHHHHhcCCCCce
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQN--GIEVAVKTFD-----------------LQHERAFKSFDTECEVMKSIRHRNLT 828 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~-----------------~~~~~~~~~~~~E~~~l~~l~h~niv 828 (1057)
.++|++.+.||+|+||+||+|..+. +..+++|.+. .........+.+|++++++++||||+
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 4689999999999999999986542 2222222110 01122345688999999999999999
Q ss_pred eEeeeeccCCeeEEEEEEccCCChhHHHhcCC----ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC
Q 001544 829 KIISSCSNEDFKALILEYMRNGSLEKCLYSGN----YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD 904 (1057)
Q Consensus 829 ~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~----~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~ 904 (1057)
++++++...+..|+|+|++.+ ++.+++.... ......++..|+.|++.||+||| +++|+||||||+|||++.
T Consensus 227 ~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH---~~gIiHrDLKP~NILl~~ 302 (501)
T PHA03210 227 KIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH---DKKLIHRDIKLENIFLNC 302 (501)
T ss_pred cEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECC
Confidence 999999999999999999854 7777665432 22345677889999999999999 999999999999999999
Q ss_pred CCcEEEEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCC-CCcccccc-cchh
Q 001544 905 NMVAHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKP-TDEIFSGE-MTLK 982 (1057)
Q Consensus 905 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p-~~~~~~~~-~~~~ 982 (1057)
++.+||+|||+++.+..... .......||..|+|||++.+..++.++|||||||++|||++|..+ +....... ..+.
T Consensus 303 ~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~ 381 (501)
T PHA03210 303 DGKIVLGDFGTAMPFEKERE-AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLL 381 (501)
T ss_pred CCCEEEEeCCCceecCcccc-cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHH
Confidence 99999999999987632221 122235689999999999998999999999999999999998754 43211110 1111
Q ss_pred hhhhhc------cch---hHHHhhhcccccccchh---hHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 983 HWVNDF------LPI---SMMKIIDANLLITEDKH---FAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 983 ~~~~~~------~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
..+... .+. ...+.++.......... .......+.++.+++.+|++.||++|||+.|+++|
T Consensus 382 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 382 KIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 111100 000 01111111110000000 00111245678889999999999999999999986
No 367
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.98 E-value=1.7e-32 Score=302.45 Aligned_cols=250 Identities=26% Similarity=0.364 Sum_probs=207.1
Q ss_pred HhCCCCCCceeccccCeEEEEEEe-cCCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEE
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALI 843 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 843 (1057)
....|.+...||+|.|++|..|+. .++..||||.+++.. ....+.+.+|+++|..+.|||||+++.+...+...|+|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 345788999999999999999974 479999999996553 23345588999999999999999999999999999999
Q ss_pred EEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC
Q 001544 844 LEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 923 (1057)
|||+.+|.+++++.+.+. ..+..+..++.|+.+|++||| ++.|||||||++||+++.+..+||+|||++..+.
T Consensus 134 ~eya~~ge~~~yl~~~gr-~~e~~ar~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~--- 206 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHGR-MKEKEARAKFRQIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKIADFGFSTFFD--- 206 (596)
T ss_pred EEeccCchhHHHHHhccc-chhhhhhhhhHHHHHHHHHHh---hcceeccccchhhcccccccceeeeccccceeec---
Confidence 999999999999988775 444888999999999999999 9999999999999999999999999999999874
Q ss_pred CccccccccccccccCccccCCCCC-CccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccc
Q 001544 924 QSMTQTQTLATLGYMAPEYGREGRV-STKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLL 1002 (1057)
Q Consensus 924 ~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1057)
.........|++-|.|||++.+..+ ++++|+||+|+++|-++.|..||++..-.+. -++.+.
T Consensus 207 ~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~L-----------------r~rvl~ 269 (596)
T KOG0586|consen 207 YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKEL-----------------RPRVLR 269 (596)
T ss_pred ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccc-----------------cchhee
Confidence 3344555689999999999988765 6899999999999999999999986211110 001111
Q ss_pred cccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 1003 ITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
..+..+.-++.+..+++++++..+|.+|++..++.++-
T Consensus 270 ----gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~ 307 (596)
T KOG0586|consen 270 ----GKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDR 307 (596)
T ss_pred ----eeecccceeechhHHHHHHhhccCccccCCHHHhhhhc
Confidence 01112233566788999999999999999999998764
No 368
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.98 E-value=3e-32 Score=308.85 Aligned_cols=266 Identities=23% Similarity=0.286 Sum_probs=199.0
Q ss_pred HHhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc--chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCe---
Q 001544 766 QATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ--HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDF--- 839 (1057)
Q Consensus 766 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--- 839 (1057)
...++|++.+.||+|++|.||+|... +++.||||++... .....+.+.+|+.++++++|||++++++++...+.
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 34678999999999999999999865 6889999998643 22334667789999999999999999998766554
Q ss_pred ---eEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccccc
Q 001544 840 ---KALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIA 916 (1057)
Q Consensus 840 ---~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 916 (1057)
.++|+||+ +++|.+++... .+++.++..++.|+++|++||| +.+|+||||||+||++++++.+||+|||++
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~dfg~~ 165 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKCQ--KLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFGLA 165 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEcccccc
Confidence 89999999 56999988753 4899999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCCccccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhh-----------h
Q 001544 917 KLLIGEDQSMTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKH-----------W 984 (1057)
Q Consensus 917 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~-----------~ 984 (1057)
...... .....++..|+|||...+ ..++.++||||+||++||+++|+.||......+ .+.. +
T Consensus 166 ~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~-~~~~i~~~~~~~~~~~ 239 (343)
T cd07851 166 RHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID-QLKRIMNLVGTPDEEL 239 (343)
T ss_pred cccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHhcCCCCHHH
Confidence 865221 233457788999998755 367899999999999999999999986432111 0111 1
Q ss_pred hhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 985 VNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
...............................+.++.+++.+|++.+|++|||+.|+++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 240 LQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred HhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 11110000011100000000000011112346789999999999999999999999875
No 369
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.98 E-value=9.2e-32 Score=295.60 Aligned_cols=242 Identities=22% Similarity=0.305 Sum_probs=187.0
Q ss_pred eeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHH---HHHHhcCCCCceeEeeeeccCCeeEEEEEEcc
Q 001544 776 LIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTEC---EVMKSIRHRNLTKIISSCSNEDFKALILEYMR 848 (1057)
Q Consensus 776 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~---~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 848 (1057)
+||+|+||.||+|... +++.||+|.+.... ......+..|. +.++...||+|+++++++.+.+..++||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999754 68999999986432 11112233343 34445579999999999999999999999999
Q ss_pred CCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcccc
Q 001544 849 NGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQ 928 (1057)
Q Consensus 849 ~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 928 (1057)
+|+|.+++... ..+++.++..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||++...... ..
T Consensus 81 g~~L~~~l~~~-~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~----~~ 152 (278)
T cd05606 81 GGDLHYHLSQH-GVFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK----KP 152 (278)
T ss_pred CCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc----CC
Confidence 99999988654 35899999999999999999999 899999999999999999999999999998755221 12
Q ss_pred ccccccccccCccccCCC-CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccch
Q 001544 929 TQTLATLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDK 1007 (1057)
Q Consensus 929 ~~~~~t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1057)
....|+..|+|||...++ .++.++||||+||++|||++|+.||.......... ....... .
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~-----------~~~~~~~-------~ 214 (278)
T cd05606 153 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-----------IDRMTLT-------M 214 (278)
T ss_pred cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHH-----------HHHHhhc-------c
Confidence 234688999999998754 68899999999999999999999987632211100 0000000 0
Q ss_pred hhHHHHHHHHHHHHHHhHcccCCCCCCC-----CHHHHHHH
Q 001544 1008 HFAAKEQCASSVFNLAMECTVESPDERI-----TAKEIVRR 1043 (1057)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 1043 (1057)
....+..++.++.+++.+|+..+|.+|| ++.|++++
T Consensus 215 ~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 215 AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred CCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 0111123467889999999999999999 99999875
No 370
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.98 E-value=2.4e-32 Score=300.98 Aligned_cols=250 Identities=27% Similarity=0.418 Sum_probs=203.3
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc---chhHHHHHHHHHHHHHhcC-CCCceeEeeeeccCCeeEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ---HERAFKSFDTECEVMKSIR-HRNLTKIISSCSNEDFKALI 843 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV 843 (1057)
++|.+.+.||+|+||.||+|... +|+.||+|++... .....+.+.+|++++++++ ||||+++++++..++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 46888999999999999999865 6999999998643 2334567889999999998 99999999999999999999
Q ss_pred EEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC
Q 001544 844 LEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 923 (1057)
|||+++++|.+++...+ .+++.++..|+.|++.|++||| +.+++|+||+|+||+++.++.++++|||++.......
T Consensus 81 ~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~ 156 (280)
T cd05581 81 LEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNS 156 (280)
T ss_pred EcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCCccccccCCcc
Confidence 99999999999987664 5999999999999999999999 9999999999999999999999999999998653322
Q ss_pred Cc------------------cccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhh
Q 001544 924 QS------------------MTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWV 985 (1057)
Q Consensus 924 ~~------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~ 985 (1057)
.. .......++..|+|||......++.++|+||+|++++++++|+.||.......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------- 229 (280)
T cd05581 157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL------- 229 (280)
T ss_pred ccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH-------
Confidence 11 12223356789999999888889999999999999999999999987532100
Q ss_pred hhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCH----HHHHHH
Q 001544 986 NDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITA----KEIVRR 1043 (1057)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~----~evl~~ 1043 (1057)
......+. ....+...++.+.+++.+||+.+|++||++ .++++|
T Consensus 230 ------~~~~~~~~--------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 230 ------TFQKILKL--------EYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred ------HHHHHHhc--------CCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 00111110 011112346678999999999999999999 888765
No 371
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.98 E-value=1.2e-32 Score=307.43 Aligned_cols=276 Identities=26% Similarity=0.350 Sum_probs=206.2
Q ss_pred CCCCceeccccCeEEEEEE-ecCCcEEEEEEeeccc-hhHHHHHHHHHHHHHhcCCCCceeEeeeeccC------CeeEE
Q 001544 771 FSENNLIGRGSFGSVYIAR-LQNGIEVAVKTFDLQH-ERAFKSFDTECEVMKSIRHRNLTKIISSCSNE------DFKAL 842 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~l 842 (1057)
|...+.||+|+||.||+|+ ..+|+.||||.++... ....++.-+|++++++++|||||++++.-++. +...+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 4556889999999999998 5579999999996532 33456778899999999999999999876543 46789
Q ss_pred EEEEccCCChhHHHhcCC--ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC--CCC--cEEEEccccc
Q 001544 843 ILEYMRNGSLEKCLYSGN--YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD--DNM--VAHLSDFGIA 916 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~--~~~--~~kl~Dfg~a 916 (1057)
|||||.+|+|...+.+.. .-+++.+.+.+..+++.|+.||| +++||||||||.||++- ++| .-||+|||.|
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 999999999999998755 45999999999999999999999 99999999999999984 334 4799999999
Q ss_pred ccccCCCCccccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchh-hhhhhccchh-H
Q 001544 917 KLLIGEDQSMTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLK-HWVNDFLPIS-M 993 (1057)
Q Consensus 917 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~-~~~~~~~~~~-~ 993 (1057)
+-+. .........||..|.+||.... +.++.-+|.|||||++||++||..||........... .|.......+ .
T Consensus 172 rel~---d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v 248 (732)
T KOG4250|consen 172 RELD---DNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGV 248 (732)
T ss_pred ccCC---CCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCce
Confidence 9763 3336677889999999999884 8889999999999999999999999976444322111 1221111111 1
Q ss_pred HHhhhc--ccccccchhhHHH----HHHHHHHHHHHhHcccCCCCCCC--CHHHHHHHHHHhHHHHh
Q 001544 994 MKIIDA--NLLITEDKHFAAK----EQCASSVFNLAMECTVESPDERI--TAKEIVRRLLKIRDFLL 1052 (1057)
Q Consensus 994 ~~~~~~--~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~Rp--s~~evl~~L~~i~~~~~ 1052 (1057)
.-..+. .........++.+ ......+-.++..++..+|++|- .+.+....+.+|.+.-.
T Consensus 249 ~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~~v 315 (732)
T KOG4250|consen 249 AIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNLKV 315 (732)
T ss_pred eEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhhhe
Confidence 000000 0011111111211 12234566778888999999999 88888888877766443
No 372
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.98 E-value=4.9e-32 Score=306.93 Aligned_cols=269 Identities=21% Similarity=0.268 Sum_probs=196.8
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccC---------
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNE--------- 837 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------- 837 (1057)
..+|+..+.||+|+||.||+|... +|+.||+|++........+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 357889999999999999999864 6899999999766556667888999999999999999999876543
Q ss_pred -----CeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC-CCCcEEEE
Q 001544 838 -----DFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD-DNMVAHLS 911 (1057)
Q Consensus 838 -----~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~-~~~~~kl~ 911 (1057)
...++||||++ ++|.+++... .+++..+..++.||++|++||| +.+|+||||||+||+++ +++.+|++
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~~~~~~~kl~ 157 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQG--PLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANVFINTEDLVLKIG 157 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCceEEEC
Confidence 35789999997 5898887643 4889999999999999999999 89999999999999998 45678999
Q ss_pred cccccccccCCCCc-cccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhcc
Q 001544 912 DFGIAKLLIGEDQS-MTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFL 989 (1057)
Q Consensus 912 Dfg~a~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 989 (1057)
|||.++........ .......++..|+|||.+.. ..++.++||||+||++|||++|+.||......+. .........
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~-~~~~~~~~~ 236 (342)
T cd07854 158 DFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQ-MQLILESVP 236 (342)
T ss_pred CcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcC
Confidence 99999765322111 11123357888999997644 5678899999999999999999999965322111 000000000
Q ss_pred --ch-hHHHh---hhcc----cccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 990 --PI-SMMKI---IDAN----LLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 990 --~~-~~~~~---~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.. ..... .... ............+..+.++.+++.+|+..||++|||+.|+++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 237 VVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred CCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 00 00000 0000 0000000011112356788999999999999999999999865
No 373
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.98 E-value=1e-31 Score=296.53 Aligned_cols=266 Identities=21% Similarity=0.262 Sum_probs=196.8
Q ss_pred CCCCceeccccCeEEEEEEec-CCcEEEEEEeeccch-hHHHHHHHHHHHHHhcC-CCCceeEeeeeccCCeeEEEEEEc
Q 001544 771 FSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHE-RAFKSFDTECEVMKSIR-HRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
|++.+.||+|++|+||+|... +++.||||++..... .......+|++.+++++ |||++++++++.+++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567789999999999999875 578999999864432 22334567899999998 999999999999999999999999
Q ss_pred cCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 848 RNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 848 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
+|++.+++.... ..+++.++..++.|++.|++||| +.+++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~--- 153 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP--- 153 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccceeccCCC---
Confidence 789998887654 46899999999999999999999 8999999999999999999999999999998653221
Q ss_pred ccccccccccccCccccC-CCCCCccchHHHHHHHHHHHhhCCCCCCcccccccch--hhhhhhccchhHHH------hh
Q 001544 927 TQTQTLATLGYMAPEYGR-EGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTL--KHWVNDFLPISMMK------II 997 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~-~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~--~~~~~~~~~~~~~~------~~ 997 (1057)
......++..|+|||... ...++.++|+||||++++||++|+.||......+... ..+..........+ ..
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07830 154 PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKL 233 (283)
T ss_pred CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccc
Confidence 223345788999999774 4557899999999999999999999986532111100 00000000000000 00
Q ss_pred hccccccc-chhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 998 DANLLITE-DKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 998 ~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
+....... .......+..+.++.+++.+||+.+|++||+++|++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 234 GFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred cccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 00000000 00001111225679999999999999999999999875
No 374
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.98 E-value=8e-32 Score=301.77 Aligned_cols=271 Identities=22% Similarity=0.291 Sum_probs=196.4
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccch--hHHHHHHHHHHHHHhcCCCCceeEeeeeccC-------
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHE--RAFKSFDTECEVMKSIRHRNLTKIISSCSNE------- 837 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------- 837 (1057)
.++|++.++||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++.+.
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 468999999999999999999865 689999999854322 2234667899999999999999999987443
Q ss_pred -CeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccccc
Q 001544 838 -DFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIA 916 (1057)
Q Consensus 838 -~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 916 (1057)
...++|+||+++ ++...+......+++.++..++.|+++||+||| +.+|+||||||+||++++++.++++|||++
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 162 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADFGLA 162 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECcCccc
Confidence 346999999975 777777665567999999999999999999999 999999999999999999999999999999
Q ss_pred ccccCCCCc---------cccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhh
Q 001544 917 KLLIGEDQS---------MTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVN 986 (1057)
Q Consensus 917 ~~~~~~~~~---------~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~ 986 (1057)
+........ .......++..|+|||...+ ..++.++||||+||++|||++|++||........ ......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~-~~~~~~ 241 (311)
T cd07866 163 RPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQ-LHLIFK 241 (311)
T ss_pred hhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHH
Confidence 765322211 11123356788999998765 4578999999999999999999999865322110 000000
Q ss_pred ---hccchhHH--Hhhhc----cccc-ccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 987 ---DFLPISMM--KIIDA----NLLI-TEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 987 ---~~~~~~~~--~~~~~----~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
...+.... ..... .... .............+.+.+++.+|+..+|++|||+.|++.|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 242 LCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 00000000 00000 0000 0000001112334678999999999999999999999865
No 375
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.98 E-value=1e-31 Score=303.93 Aligned_cols=269 Identities=21% Similarity=0.256 Sum_probs=195.9
Q ss_pred CCCC-CCceeccccCeEEEEEEec-CCcEEEEEEeeccchhH--------------HHHHHHHHHHHHhcCCCCceeEee
Q 001544 769 NGFS-ENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERA--------------FKSFDTECEVMKSIRHRNLTKIIS 832 (1057)
Q Consensus 769 ~~~~-~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~l~~ 832 (1057)
++|. ..+.||+|+||+||+|... +++.||||+++...... ...+.+|++++++++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4564 3477999999999999865 68999999985432211 124778999999999999999999
Q ss_pred eeccCCeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEc
Q 001544 833 SCSNEDFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSD 912 (1057)
Q Consensus 833 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 912 (1057)
++..++..++||||++ |+|.+++... ..+++.....++.|++.|++||| +.+++||||+|+||+++.++.++++|
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH---~~~i~H~dl~~~nill~~~~~~kl~d 162 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRK-IRLTESQVKCILLQILNGLNVLH---KWYFMHRDLSPANIFINSKGICKIAD 162 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHeEECCCCCEEECC
Confidence 9999999999999997 5898888654 35899999999999999999999 99999999999999999999999999
Q ss_pred ccccccccCCC------------CccccccccccccccCccccCCC-CCCccchHHHHHHHHHHHhhCCCCCCccccccc
Q 001544 913 FGIAKLLIGED------------QSMTQTQTLATLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEM 979 (1057)
Q Consensus 913 fg~a~~~~~~~------------~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~ 979 (1057)
||.+....... .........++..|+|||.+.+. .++.++||||+||++|||++|+.||......+.
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~ 242 (335)
T PTZ00024 163 FGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQ 242 (335)
T ss_pred ccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 99997653110 01112223467789999988764 468999999999999999999999865322111
Q ss_pred chhhhhhhc---cchhHHHh-----hhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 980 TLKHWVNDF---LPISMMKI-----IDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 980 ~~~~~~~~~---~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
........ .+...... ..................++.++.+++.+|++.+|++||++.|++.+
T Consensus 243 -~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 243 -LGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred -HHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 10000000 00000000 00000000000111112346778999999999999999999999875
No 376
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.98 E-value=9.1e-32 Score=297.94 Aligned_cols=252 Identities=24% Similarity=0.317 Sum_probs=197.0
Q ss_pred CCCCCceeccccCeEEEEEEe----cCCcEEEEEEeeccc----hhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCCee
Q 001544 770 GFSENNLIGRGSFGSVYIARL----QNGIEVAVKTFDLQH----ERAFKSFDTECEVMKSI-RHRNLTKIISSCSNEDFK 840 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 840 (1057)
+|++.+.||+|+||.||+|.. .+|+.||+|+++... ....+.+.+|+++++++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477889999999999999975 368999999986432 22346778899999999 599999999999999999
Q ss_pred EEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccccccccc
Q 001544 841 ALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLI 920 (1057)
Q Consensus 841 ~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 920 (1057)
++||||+++++|.+++.... .+++..+..++.|+++||+||| +.+++||||+|+||++++++.+||+|||++....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 156 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE-RFKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFH 156 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECCCCCEEEeeCccceecc
Confidence 99999999999999987654 5888999999999999999999 9999999999999999999999999999997653
Q ss_pred CCCCccccccccccccccCccccCCC--CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhh
Q 001544 921 GEDQSMTQTQTLATLGYMAPEYGREG--RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIID 998 (1057)
Q Consensus 921 ~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1057)
... ........++..|+|||..... .++.++||||+|+++|+|++|+.||..... ......+.. ..
T Consensus 157 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-~~~~~~~~~---------~~- 224 (290)
T cd05613 157 EDE-VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE-KNSQAEISR---------RI- 224 (290)
T ss_pred ccc-ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc-cccHHHHHH---------Hh-
Confidence 221 1122234578899999987653 467899999999999999999999863111 111111110 00
Q ss_pred cccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCC-----CHHHHHHH
Q 001544 999 ANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERI-----TAKEIVRR 1043 (1057)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 1043 (1057)
.... .+.+..+++.+.+++.+|++.+|++|| ++.+++.+
T Consensus 225 --~~~~----~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 225 --LKSE----PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred --hccC----CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 0000 011123567789999999999999997 77888765
No 377
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.98 E-value=6e-32 Score=299.08 Aligned_cols=255 Identities=23% Similarity=0.321 Sum_probs=198.5
Q ss_pred CCCCCceeccccCeEEEEEEe----cCCcEEEEEEeeccc----hhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCCee
Q 001544 770 GFSENNLIGRGSFGSVYIARL----QNGIEVAVKTFDLQH----ERAFKSFDTECEVMKSI-RHRNLTKIISSCSNEDFK 840 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 840 (1057)
+|++.+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+++++++ +||||+++++.+..++..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 367789999999999999974 357899999986432 23346788999999999 599999999999999999
Q ss_pred EEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccccccccc
Q 001544 841 ALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLI 920 (1057)
Q Consensus 841 ~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 920 (1057)
++||||+++|+|.+++.... .+++..+..++.|+++||+||| +.+++||||||+||+++.++.++++|||+++...
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 156 (288)
T cd05583 81 HLILDYVNGGELFTHLYQRE-HFTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (288)
T ss_pred EEEEecCCCCcHHHHHhhcC-CcCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEECccccccc
Confidence 99999999999999887643 5889999999999999999999 8999999999999999999999999999987653
Q ss_pred CCCCccccccccccccccCccccCCCC--CCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhh
Q 001544 921 GEDQSMTQTQTLATLGYMAPEYGREGR--VSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIID 998 (1057)
Q Consensus 921 ~~~~~~~~~~~~~t~~y~aPE~~~~~~--~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1057)
.... .......++..|+|||...+.. .+.++||||+|+++|||++|..||..... ......+. .....
T Consensus 157 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~-~~~~~~~~--------~~~~~ 226 (288)
T cd05583 157 AEEE-ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGE-QNSQSEIS--------RRILK 226 (288)
T ss_pred cccc-cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcc-cchHHHHH--------HHHHc
Confidence 3221 1122345788999999887655 78899999999999999999999853111 00011110 00100
Q ss_pred cccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHH
Q 001544 999 ANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLK 1046 (1057)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1046 (1057)
. ..+.+..++..+.+++.+||+.+|++|||++++.+.++.
T Consensus 227 ~--------~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 227 S--------KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred c--------CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 0 011122355678999999999999999998877665543
No 378
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=1.3e-31 Score=295.48 Aligned_cols=267 Identities=26% Similarity=0.296 Sum_probs=200.3
Q ss_pred CCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 771 FSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
|+..+.||+|++|.||+|+.. +++.||+|++.... ....+.+..|++++++++|+|++++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 556788999999999999865 59999999997543 333467788999999999999999999999999999999999
Q ss_pred cCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccc
Q 001544 848 RNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT 927 (1057)
Q Consensus 848 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 927 (1057)
+ ++|.+++......+++.++..++.|+++|++||| +.+|+||||+|+||++++++.++|+|||.++...... ..
T Consensus 81 ~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~--~~ 154 (282)
T cd07829 81 D-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPL--RT 154 (282)
T ss_pred C-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCc--cc
Confidence 8 5899999876556999999999999999999999 8999999999999999999999999999987653221 12
Q ss_pred cccccccccccCccccCCC-CCCccchHHHHHHHHHHHhhCCCCCCcccccccc--hhhhhhhccchhHHHhhhc-----
Q 001544 928 QTQTLATLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMT--LKHWVNDFLPISMMKIIDA----- 999 (1057)
Q Consensus 928 ~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~----- 999 (1057)
.....++..|+|||...+. .++.++||||+|+++||+++|+.||......+.. .........+.......+.
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (282)
T cd07829 155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKP 234 (282)
T ss_pred cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccc
Confidence 2334456789999988766 7899999999999999999999998652211100 0000000000000000000
Q ss_pred ccccccch-hhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1000 NLLITEDK-HFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1000 ~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
........ .....+..+..+.+++.+|+..+|++||++.+++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 235 TFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred cccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 00000000 001112236789999999999999999999999875
No 379
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=3.8e-32 Score=251.78 Aligned_cols=267 Identities=25% Similarity=0.287 Sum_probs=200.5
Q ss_pred CCCCCceeccccCeEEEEEEe-cCCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
.|...++||+|.||+||+|+. ++++.||+|+++..+ +..-....+|+-+++.++|+|||++++....+....+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 455568899999999999985 468999999986543 34456678999999999999999999999989999999999
Q ss_pred ccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 847 MRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
|+. +|.++..+-...++...+..++.|+++|+.++| ++.+.|||+||.|.+++.+|++|++|||+++.+. -...
T Consensus 83 cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fch---shnvlhrdlkpqnllin~ngelkladfglarafg--ipvr 156 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADFGLARAFG--IPVR 156 (292)
T ss_pred hhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecccchhhhcC--CceE
Confidence 976 899888877777999999999999999999999 9999999999999999999999999999998652 2223
Q ss_pred ccccccccccccCccccCCCC-CCccchHHHHHHHHHHHhhCCCC-CCcccccccchhhhhh--hccch----hHHHhhh
Q 001544 927 TQTQTLATLGYMAPEYGREGR-VSTKGDVYSFGILLMETFTRRKP-TDEIFSGEMTLKHWVN--DFLPI----SMMKIID 998 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~~~-~~~~~Dv~s~G~il~elltg~~p-~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~ 998 (1057)
-.+..+.|..|++|.++.+.+ |+...|+||.||++.|+.....| |..... +..+..... ....+ ++.+.-|
T Consensus 157 cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dv-ddqlkrif~~lg~p~ed~wps~t~lpd 235 (292)
T KOG0662|consen 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV-DDQLKRIFRLLGTPTEDQWPSMTKLPD 235 (292)
T ss_pred eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcH-HHHHHHHHHHhCCCccccCCccccCCC
Confidence 445567899999999988866 78889999999999999985555 432111 111111100 00000 0111111
Q ss_pred cccccccc--h-hhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 999 ANLLITED--K-HFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 999 ~~~~~~~~--~-~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
........ . .....+.....-.+++.+.+.-+|.+|.++.++++|
T Consensus 236 yk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 236 YKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 11111000 0 111123344556788999999999999999999876
No 380
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=9.2e-32 Score=292.84 Aligned_cols=248 Identities=23% Similarity=0.344 Sum_probs=194.3
Q ss_pred CCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc-----chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ-----HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALI 843 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 843 (1057)
+|.+.++||+|+||.||+|... .+..+++|+++.. ......++.+|+.++++++||||+++++++.+.+..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 4778899999999999999765 3455666665421 122334567899999999999999999999999999999
Q ss_pred EEEccCCChhHHHhc---CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccccccccc
Q 001544 844 LEYMRNGSLEKCLYS---GNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLI 920 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 920 (1057)
|||+++++|.+++.. ....+++.++..++.|+++|++||| +.+++|+||+|+||+++. +.++++|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH---HcCccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999998864 3356899999999999999999999 999999999999999975 579999999987653
Q ss_pred CCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcc
Q 001544 921 GEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDAN 1000 (1057)
Q Consensus 921 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1057)
.... ......++..|+|||...+..++.++|+||+|+++|+|++|..||...... .. ........
T Consensus 157 ~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~-----~~--------~~~~~~~~ 221 (260)
T cd08222 157 GSCD--LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFL-----SV--------VLRIVEGP 221 (260)
T ss_pred CCcc--cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH-----HH--------HHHHHcCC
Confidence 3221 222345788999999988888899999999999999999999998542110 00 00111000
Q ss_pred cccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1001 LLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
....+..++.++.+++.+|+..+|++||++.|++++
T Consensus 222 -------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 222 -------TPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred -------CCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 011123456788999999999999999999999875
No 381
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=2.4e-31 Score=300.22 Aligned_cols=268 Identities=22% Similarity=0.246 Sum_probs=193.4
Q ss_pred CCCCCceeccccCeEEEEEEec-C--CcEEEEEEeeccc--hhHHHHHHHHHHHHHhc-CCCCceeEeeeecc----CCe
Q 001544 770 GFSENNLIGRGSFGSVYIARLQ-N--GIEVAVKTFDLQH--ERAFKSFDTECEVMKSI-RHRNLTKIISSCSN----EDF 839 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~-~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~~~ 839 (1057)
+|++.+.||+|+||.||+|+.. + +..||||++.... ....+.+.+|+++++++ .||||+++++++.. ...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4778899999999999999865 4 7899999986432 22346778899999999 59999999987532 346
Q ss_pred eEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccc
Q 001544 840 KALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 919 (1057)
Q Consensus 840 ~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 919 (1057)
.++++||++ ++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||.++..
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~ 155 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQ-PLTDAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGLARGF 155 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcCCCceec
Confidence 788999986 58998886544 5899999999999999999999 999999999999999999999999999999865
Q ss_pred cCCCC--ccccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhh-----------hh
Q 001544 920 IGEDQ--SMTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKH-----------WV 985 (1057)
Q Consensus 920 ~~~~~--~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~-----------~~ 985 (1057)
..... ........|+..|+|||...+ ..++.++|+||+||++|+|++|+.||....... .... +.
T Consensus 156 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~ 234 (332)
T cd07857 156 SENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVD-QLNQILQVLGTPDEETL 234 (332)
T ss_pred ccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHH-HHHHHHHHhCCCCHHHH
Confidence 32211 111223467889999998765 468899999999999999999999986522110 0000 00
Q ss_pred hhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 986 NDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
...........................+..+..+.+++.+|++.+|++|||+.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 235 SRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred HhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000000000000000000001112245679999999999999999999999865
No 382
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=1e-32 Score=294.07 Aligned_cols=246 Identities=22% Similarity=0.332 Sum_probs=199.7
Q ss_pred CceeccccCeEEEEEE-ecCCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCC
Q 001544 774 NNLIGRGSFGSVYIAR-LQNGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNG 850 (1057)
Q Consensus 774 ~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~g 850 (1057)
.++||+|.||+||-|. .++|+.||||++++.. ++...++.+|+.++++++||.||.+-..|+..+..+.|||-+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 4789999999999996 4589999999996542 344578899999999999999999999999999999999999764
Q ss_pred ChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC---CcEEEEcccccccccCCCCccc
Q 001544 851 SLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN---MVAHLSDFGIAKLLIGEDQSMT 927 (1057)
Q Consensus 851 sL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~---~~~kl~Dfg~a~~~~~~~~~~~ 927 (1057)
-|+-.+......+++....-...||+.||.||| .++|||+|+||+|||+... -++|+||||+|+++.. ...
T Consensus 649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE---ksF 722 (888)
T KOG4236|consen 649 MLEMILSSEKGRLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE---KSF 722 (888)
T ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeeccccceeecch---hhh
Confidence 455455555567888888889999999999999 8999999999999999643 3799999999998732 233
Q ss_pred cccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccch
Q 001544 928 QTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDK 1007 (1057)
Q Consensus 928 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1057)
....+||+.|.|||++....|...-|+||.||++|--++|..||.+..+ +. +-+.... .-.
T Consensus 723 RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd----In------------dQIQNAa---FMy 783 (888)
T KOG4236|consen 723 RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED----IN------------DQIQNAA---FMY 783 (888)
T ss_pred hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc----hh------------HHhhccc---ccc
Confidence 4457899999999999999999999999999999999999999876211 11 1111111 111
Q ss_pred hhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 1008 HFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
....+.+++++..++|...++..-.+|.+..+.+.|-
T Consensus 784 Pp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~ 820 (888)
T KOG4236|consen 784 PPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHP 820 (888)
T ss_pred CCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccch
Confidence 2223456788899999999999999999998877653
No 383
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-32 Score=318.94 Aligned_cols=258 Identities=22% Similarity=0.319 Sum_probs=209.4
Q ss_pred HHHHhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeec---cchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCe
Q 001544 764 LFQATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDL---QHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDF 839 (1057)
Q Consensus 764 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 839 (1057)
+.-..++|.+.++||+|+||.|..++.+ +++.||+|++++ -......-|..|-.+|.--..+=|++++-+|.+..+
T Consensus 70 lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~ 149 (1317)
T KOG0612|consen 70 LRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERY 149 (1317)
T ss_pred HhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccc
Confidence 3344578999999999999999999865 688999999865 233445778899999998889999999999999999
Q ss_pred eEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccc
Q 001544 840 KALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 919 (1057)
Q Consensus 840 ~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 919 (1057)
.|+|||||+||+|-..+.+.+ ++++..+.-++..|+-||+-+| +.|+|||||||+|||+|..|++|++|||.+-.+
T Consensus 150 LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH---~mgyVHRDiKPDNvLld~~GHikLADFGsClkm 225 (1317)
T KOG0612|consen 150 LYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLH---SMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKM 225 (1317)
T ss_pred eEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHH---hccceeccCCcceeEecccCcEeeccchhHHhc
Confidence 999999999999999998877 7999999999999999999999 999999999999999999999999999999877
Q ss_pred cCCCCccccccccccccccCccccC----C-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHH
Q 001544 920 IGEDQSMTQTQTLATLGYMAPEYGR----E-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMM 994 (1057)
Q Consensus 920 ~~~~~~~~~~~~~~t~~y~aPE~~~----~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1057)
... ........+|||-|++||++. + +.|++.+|.||+||++|||+.|..||.... ....| .
T Consensus 226 ~~d-G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads----lveTY---------~ 291 (1317)
T KOG0612|consen 226 DAD-GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS----LVETY---------G 291 (1317)
T ss_pred CCC-CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH----HHHHH---------H
Confidence 433 344556678999999999864 3 678999999999999999999999986511 01111 1
Q ss_pred HhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCC---HHHHHHHH
Q 001544 995 KIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERIT---AKEIVRRL 1044 (1057)
Q Consensus 995 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps---~~evl~~L 1044 (1057)
++.+.. ....+|....++.+..++|.+.+. +|+.|.. +.++..|-
T Consensus 292 KIm~hk----~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~Hp 339 (1317)
T KOG0612|consen 292 KIMNHK----ESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHP 339 (1317)
T ss_pred HHhchh----hhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCc
Confidence 222211 111223334578889999998876 6777776 88887764
No 384
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-32 Score=285.95 Aligned_cols=256 Identities=28% Similarity=0.430 Sum_probs=200.7
Q ss_pred CCCCCCceeccccCeEEEEEE-ecCCcEEEEEEeeccc-------hhHHHHHHHHHHHHHhcCCCCceeEeeeec-cCCe
Q 001544 769 NGFSENNLIGRGSFGSVYIAR-LQNGIEVAVKTFDLQH-------ERAFKSFDTECEVMKSIRHRNLTKIISSCS-NEDF 839 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~ 839 (1057)
++|-...+||+|||+.||+|. +...+.||||+-.... ....+...+|.++.+.+.||.||++++||. +.+.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 456677899999999999996 5568999999863321 123355678999999999999999999995 5678
Q ss_pred eEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC---CCCcEEEEccccc
Q 001544 840 KALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD---DNMVAHLSDFGIA 916 (1057)
Q Consensus 840 ~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~---~~~~~kl~Dfg~a 916 (1057)
.|-|.|||+|.+|+-++...+ .++++++..|+.||+.||.||.+ .+.+|||-|+||.|||+. .-|.+||.|||++
T Consensus 543 FCTVLEYceGNDLDFYLKQhk-lmSEKEARSIiMQiVnAL~YLNE-ikpPIIHYDLKPgNILLv~GtacGeIKITDFGLS 620 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLKQHK-LMSEKEARSIIMQIVNALKYLNE-IKPPIIHYDLKPGNILLVNGTACGEIKITDFGLS 620 (775)
T ss_pred ceeeeeecCCCchhHHHHhhh-hhhHHHHHHHHHHHHHHHHHHhc-cCCCeeeeccCCccEEEecCcccceeEeeecchh
Confidence 899999999999998887765 48999999999999999999994 478999999999999995 4589999999999
Q ss_pred ccccCCCCcc-----ccccccccccccCccccCCC----CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhh
Q 001544 917 KLLIGEDQSM-----TQTQTLATLGYMAPEYGREG----RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVND 987 (1057)
Q Consensus 917 ~~~~~~~~~~-----~~~~~~~t~~y~aPE~~~~~----~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~ 987 (1057)
+.+.+..... ..+...||.+|++||.+.-+ +.+.|+||||+||++|+++.|+.||+.....
T Consensus 621 KIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ---------- 690 (775)
T KOG1151|consen 621 KIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ---------- 690 (775)
T ss_pred hhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH----------
Confidence 9986554332 22345799999999976533 4688999999999999999999999762211
Q ss_pred ccchhHHHhhhcc-cccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHH
Q 001544 988 FLPISMMKIIDAN-LLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVR 1042 (1057)
Q Consensus 988 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1042 (1057)
.++.... +....+..++..+.++.+..++|++|+++.-++|..+.++..
T Consensus 691 ------QdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 691 ------QDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred ------HHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 1111111 111112233444567788999999999999999998887754
No 385
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=5.9e-33 Score=270.86 Aligned_cols=272 Identities=21% Similarity=0.327 Sum_probs=200.1
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeec--cchhHHHHHHHHHHHHHhcCCCCceeEeeeecc--------C
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDL--QHERAFKSFDTECEVMKSIRHRNLTKIISSCSN--------E 837 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------~ 837 (1057)
..|+...+||+|.||.||+|+.+ +|+.||+|++-. +....-....+|++++..++|+|++.+++.|.. .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 45666789999999999999754 588899987632 233333556789999999999999999998743 2
Q ss_pred CeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccc
Q 001544 838 DFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAK 917 (1057)
Q Consensus 838 ~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~ 917 (1057)
...|+||++++. +|.-.+......++..++.+++.++..||.|+| ...|+|||+||.|+|++.+|.+||+|||+++
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilklADFGlar 172 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIH---RNKILHRDMKAANVLITKDGILKLADFGLAR 172 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEEeecccccc
Confidence 357999999987 888888777677999999999999999999999 9999999999999999999999999999997
Q ss_pred cccCCC--CccccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCccccc-----------ccchhh
Q 001544 918 LLIGED--QSMTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSG-----------EMTLKH 983 (1057)
Q Consensus 918 ~~~~~~--~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~-----------~~~~~~ 983 (1057)
.+.... ....++..+.|..|++||.+.+ ..++++.|+|+.||++.||+||.+-+....+. ..+..-
T Consensus 173 ~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkev 252 (376)
T KOG0669|consen 173 AFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEV 252 (376)
T ss_pred ceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCccc
Confidence 653222 2334556677999999998765 56899999999999999999998876542110 011111
Q ss_pred hhhhccchhHHHhhhcccccccchhhHHHHHH------HHHHHHHHhHcccCCCCCCCCHHHHHHHHHHh
Q 001544 984 WVNDFLPISMMKIIDANLLITEDKHFAAKEQC------ASSVFNLAMECTVESPDERITAKEIVRRLLKI 1047 (1057)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 1047 (1057)
|-.- ...+.++.++..-..+.. ....++. .++..+++.+++..||.+|+++.+++.|----
T Consensus 253 WP~~-d~lpL~~sie~ePl~~~~--~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~ 319 (376)
T KOG0669|consen 253 WPNV-DNLPLYQSIELEPLPKGQ--KRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFW 319 (376)
T ss_pred CCCc-ccchHHHhccCCCCCcch--hhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhh
Confidence 2110 011122222111111111 1111111 24678999999999999999999999886433
No 386
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=4.4e-32 Score=281.88 Aligned_cols=266 Identities=22% Similarity=0.255 Sum_probs=199.9
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhcC--CC----CceeEeeeeccCCee
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSIR--HR----NLTKIISSCSNEDFK 840 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~----niv~l~~~~~~~~~~ 840 (1057)
+++|.+...+|+|.||.|-++.+. .+..||||+++. .....++..-|+++++++. .| -++.+.++|.-.++.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~-V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKN-VDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHH-HHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 678999999999999999999654 479999999864 3455567788999999993 23 377888899999999
Q ss_pred EEEEEEccCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC---------------
Q 001544 841 ALILEYMRNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD--------------- 904 (1057)
Q Consensus 841 ~lV~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~--------------- 904 (1057)
|+|+|.+ |-++.+++..+. .+++..++..|++|++++++||| +.+++|.|+||+||++.+
T Consensus 167 Civfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~ 242 (415)
T KOG0671|consen 167 CIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKPENILFVSSEYFKTYNPKKKVCF 242 (415)
T ss_pred EEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHH---hcceeecCCChheEEEeccceEEEeccCCccce
Confidence 9999988 558999998755 67999999999999999999999 999999999999999832
Q ss_pred -----CCcEEEEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCccccccc
Q 001544 905 -----NMVAHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEM 979 (1057)
Q Consensus 905 -----~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~ 979 (1057)
+..+|++|||.|++- ....+..+.|..|+|||++.+-.++.++||||+|||++|+.||..-|......|.
T Consensus 243 ~r~~ks~~I~vIDFGsAtf~-----~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EH 317 (415)
T KOG0671|consen 243 IRPLKSTAIKVIDFGSATFD-----HEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEH 317 (415)
T ss_pred eccCCCcceEEEecCCccee-----ccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHH
Confidence 336899999999864 2233556789999999999999999999999999999999999987765432210
Q ss_pred c-hhhhhhhccchhHHHhh------hcccc--------------cccchhh----HHHHHHHHHHHHHHhHcccCCCCCC
Q 001544 980 T-LKHWVNDFLPISMMKII------DANLL--------------ITEDKHF----AAKEQCASSVFNLAMECTVESPDER 1034 (1057)
Q Consensus 980 ~-~~~~~~~~~~~~~~~~~------~~~~~--------------~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~R 1034 (1057)
- .-+-+-...|..+.... ..... ....... ........++++++++|+..||.+|
T Consensus 318 LaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~R 397 (415)
T KOG0671|consen 318 LAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARR 397 (415)
T ss_pred HHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcccc
Confidence 0 00000011111111111 00000 0000000 0011234579999999999999999
Q ss_pred CCHHHHHHH
Q 001544 1035 ITAKEIVRR 1043 (1057)
Q Consensus 1035 ps~~evl~~ 1043 (1057)
+|++|++.|
T Consensus 398 iTl~EAL~H 406 (415)
T KOG0671|consen 398 ITLREALSH 406 (415)
T ss_pred ccHHHHhcC
Confidence 999999986
No 387
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=5.8e-31 Score=320.64 Aligned_cols=146 Identities=28% Similarity=0.433 Sum_probs=131.7
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALI 843 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 843 (1057)
.++|.+.++||+|+||+||+|... +++.||||+++... ......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 357889999999999999999866 68999999986432 33457788999999999999999999999999999999
Q ss_pred EEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccc
Q 001544 844 LEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAK 917 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~ 917 (1057)
|||+.+++|.+++.... .+++..++.|+.||+.||+||| ..+|+||||||+|||++.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~~~-~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHIYG-YFDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999987654 4888999999999999999999 8999999999999999999999999999986
No 388
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=6.3e-31 Score=284.44 Aligned_cols=239 Identities=29% Similarity=0.361 Sum_probs=194.4
Q ss_pred eccccCeEEEEEEec-CCcEEEEEEeeccch---hHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCCCh
Q 001544 777 IGRGSFGSVYIARLQ-NGIEVAVKTFDLQHE---RAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNGSL 852 (1057)
Q Consensus 777 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL 852 (1057)
||+|+||.||+|... +++.||+|++..... .....+..|++++++++||||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999865 589999999865432 2456888999999999999999999999999999999999999999
Q ss_pred hHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcccccccc
Q 001544 853 EKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL 932 (1057)
Q Consensus 853 ~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 932 (1057)
.+++.... .+++..+..++.|+++|+.|+| +.+++|+||+|+||+++.++.++++|||.+....... .......
T Consensus 81 ~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~ 154 (250)
T cd05123 81 FSHLSKEG-RFSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--SRTNTFC 154 (250)
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceecccCC--CcccCCc
Confidence 99987664 4899999999999999999999 8999999999999999999999999999997653221 1233456
Q ss_pred ccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHHH
Q 001544 933 ATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAK 1012 (1057)
Q Consensus 933 ~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1057)
++..|+|||...+...+.++|+||+|+++||+++|+.||..... ... ...... .....+
T Consensus 155 ~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~--------~~~~~~--------~~~~~~ 213 (250)
T cd05123 155 GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-----KEI--------YEKILK--------DPLRFP 213 (250)
T ss_pred CCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHH--------HHHHhc--------CCCCCC
Confidence 78899999999888889999999999999999999999865221 000 001110 011112
Q ss_pred HHHHHHHHHHHhHcccCCCCCCCCH---HHHHH
Q 001544 1013 EQCASSVFNLAMECTVESPDERITA---KEIVR 1042 (1057)
Q Consensus 1013 ~~~~~~l~~li~~cl~~dP~~Rps~---~evl~ 1042 (1057)
...+.++.+++.+||..||++||++ .++.+
T Consensus 214 ~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~ 246 (250)
T cd05123 214 EFLSPEARDLISGLLQKDPTKRLGSGGAEEIKA 246 (250)
T ss_pred CCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHh
Confidence 2336678899999999999999999 55544
No 389
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-31 Score=295.46 Aligned_cols=241 Identities=25% Similarity=0.263 Sum_probs=195.6
Q ss_pred hCCCCCCceeccccCeEEEEEE-ecCCcEEEEEEeeccchhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCCeeEEEEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIAR-LQNGIEVAVKTFDLQHERAFKSFDTECEVMKSI-RHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
++.|+....+|.|+|+.|-++. ..+++..+||++.... .+-.+|+.++... .||||+++.+.+.++.+.|+|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 3456666779999999999886 4468999999996552 2335677777666 69999999999999999999999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeee-CCCCcEEEEcccccccccCCCC
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL-DDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill-~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
.+.|+-+.+.+...+. ...++..|+.+|+.|+.||| ++||||||+||+|||+ ++.++++|+|||.++.....
T Consensus 397 ~l~g~ell~ri~~~~~--~~~e~~~w~~~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~-- 469 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKPE--FCSEASQWAAELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS-- 469 (612)
T ss_pred hccccHHHHHHHhcch--hHHHHHHHHHHHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEEEEechhhhCchh--
Confidence 9999988887776553 22778889999999999999 9999999999999999 69999999999999875322
Q ss_pred ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccc
Q 001544 925 SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLIT 1004 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1057)
....+-|..|.|||+.....+++++|+||+|+++|+|++|+.||.....+.. ....+ .
T Consensus 470 ---~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~e-------------i~~~i---~--- 527 (612)
T KOG0603|consen 470 ---CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIE-------------IHTRI---Q--- 527 (612)
T ss_pred ---hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHH-------------HHHhh---c---
Confidence 3344568899999999999999999999999999999999999876433310 11111 0
Q ss_pred cchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 1005 EDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
..+..+.++.++++++.+|++.||.+||+|.++..|=
T Consensus 528 ---~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~ 564 (612)
T KOG0603|consen 528 ---MPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHP 564 (612)
T ss_pred ---CCccccccCHHHHHHHHHhccCChhhCcChhhhccCc
Confidence 0011156788899999999999999999999998763
No 390
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=9.1e-31 Score=280.37 Aligned_cols=219 Identities=20% Similarity=0.172 Sum_probs=176.1
Q ss_pred ccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCCChhHHHhc
Q 001544 780 GSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNGSLEKCLYS 858 (1057)
Q Consensus 780 G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 858 (1057)
|.+|+||+|... +++.||+|++.... .+.+|...+....||||+++++++.+.+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 899999999864 68999999986542 233455555566799999999999999999999999999999998876
Q ss_pred CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcccccccccccccc
Q 001544 859 GNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATLGYM 938 (1057)
Q Consensus 859 ~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~ 938 (1057)
.. .+++..+..++.|+++|++||| +.+|+||||||+||+++.++.++++|||.+...... .....++..|+
T Consensus 79 ~~-~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----~~~~~~~~~y~ 149 (237)
T cd05576 79 FL-NIPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----CDGEAVENMYC 149 (237)
T ss_pred hc-CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhccccc-----cccCCcCcccc
Confidence 54 4899999999999999999999 999999999999999999999999999987654221 12234567799
Q ss_pred CccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHH
Q 001544 939 APEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASS 1018 (1057)
Q Consensus 939 aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1018 (1057)
|||...+..++.++||||+|+++|||++|+.|+........ .. .....+..++..
T Consensus 150 aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~---------------~~----------~~~~~~~~~~~~ 204 (237)
T cd05576 150 APEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN---------------TH----------TTLNIPEWVSEE 204 (237)
T ss_pred CCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc---------------cc----------cccCCcccCCHH
Confidence 99999888889999999999999999999987643211000 00 000111234567
Q ss_pred HHHHHhHcccCCCCCCCCH
Q 001544 1019 VFNLAMECTVESPDERITA 1037 (1057)
Q Consensus 1019 l~~li~~cl~~dP~~Rps~ 1037 (1057)
+.+++.+|++.||++||++
T Consensus 205 ~~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 205 ARSLLQQLLQFNPTERLGA 223 (237)
T ss_pred HHHHHHHHccCCHHHhcCC
Confidence 8899999999999999997
No 391
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=8.8e-31 Score=297.70 Aligned_cols=254 Identities=22% Similarity=0.348 Sum_probs=207.8
Q ss_pred HHhCCCCCCceeccccCeEEEEEE-ecCCcEEEEEEeeccchhHHHHHHHHHHHHHhc-CCCCceeEeeeec-----cCC
Q 001544 766 QATNGFSENNLIGRGSFGSVYIAR-LQNGIEVAVKTFDLQHERAFKSFDTECEVMKSI-RHRNLTKIISSCS-----NED 838 (1057)
Q Consensus 766 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~-----~~~ 838 (1057)
..++.|++.++||.|.+|.||+++ .++|+.+|||+.....+.. ++++.|.++++.. .|||++.++|+|. .++
T Consensus 16 dp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~d-eEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~D 94 (953)
T KOG0587|consen 16 DPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEE-EEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGD 94 (953)
T ss_pred CCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcccc-HHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCC
Confidence 346678999999999999999997 5579999999987655443 6678899999888 6999999999984 367
Q ss_pred eeEEEEEEccCCChhHHHhcC-CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccc
Q 001544 839 FKALILEYMRNGSLEKCLYSG-NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAK 917 (1057)
Q Consensus 839 ~~~lV~E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~ 917 (1057)
..++|||||.+|+..|++..- +..+.|..+..|++.++.|+.+|| ...++|||||-.|||++.++.+|++|||.+.
T Consensus 95 qLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH---~nkviHRDikG~NiLLT~e~~VKLvDFGvSa 171 (953)
T KOG0587|consen 95 QLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLH---NNKVIHRDIKGQNVLLTENAEVKLVDFGVSA 171 (953)
T ss_pred eEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHh---hcceeeecccCceEEEeccCcEEEeeeeeee
Confidence 899999999999999987643 356899999999999999999999 9999999999999999999999999999998
Q ss_pred cccCCCCccccccccccccccCccccCC-----CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchh
Q 001544 918 LLIGEDQSMTQTQTLATLGYMAPEYGRE-----GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPIS 992 (1057)
Q Consensus 918 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 992 (1057)
.+.. ........+||+.|||||++.. ..|+.++|+||+|++..||.-|.+|+.++..-..
T Consensus 172 Qlds--T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmra------------- 236 (953)
T KOG0587|consen 172 QLDS--TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA------------- 236 (953)
T ss_pred eeec--ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhh-------------
Confidence 7632 2233445689999999998753 3467899999999999999999999877433211
Q ss_pred HHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 993 MMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
++. +...+......++....++.++|..|+..|.++||++.++++|
T Consensus 237 ---LF~--IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 237 ---LFL--IPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred ---hcc--CCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 110 1122333334455667899999999999999999999999876
No 392
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-31 Score=276.55 Aligned_cols=263 Identities=23% Similarity=0.310 Sum_probs=203.6
Q ss_pred CCCCCCccccccccCCHHHHHHHhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHH
Q 001544 745 PNEVNVPLEATWRRFSYLELFQATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMK 820 (1057)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~ 820 (1057)
++....+........+-.+..+ ..+|....+||+|+||+|-.|.-+ +.+.+|||++++.. +...+--+.|-++++
T Consensus 326 p~~~~~~~~~~~~~~~~~d~i~-~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLA 404 (683)
T KOG0696|consen 326 PEKKTMPTDSKFHNSSKRDRIK-ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLA 404 (683)
T ss_pred CCCCCCCCcccCCCCCccccee-ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhhee
Confidence 3333344444444555555333 347999999999999999999755 56789999987552 222333445667776
Q ss_pred hc-CCCCceeEeeeeccCCeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCC
Q 001544 821 SI-RHRNLTKIISSCSNEDFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSN 899 (1057)
Q Consensus 821 ~l-~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N 899 (1057)
-. +-|.+++++.+|..-+..|+||||+.||+|--.+++-++ +.+..++-+|.+||-||-+|| +++|+.||+|.+|
T Consensus 405 L~~kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ~Gk-FKEp~AvFYAaEiaigLFFLh---~kgIiYRDLKLDN 480 (683)
T KOG0696|consen 405 LPGKPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGK-FKEPVAVFYAAEIAIGLFFLH---SKGIIYRDLKLDN 480 (683)
T ss_pred cCCCCchHHHHHHHhhhhhheeeEEEEecCchhhhHHHHhcc-cCCchhhhhhHHHHHHhhhhh---cCCeeeeeccccc
Confidence 65 578999999999999999999999999999888876554 777888999999999999999 9999999999999
Q ss_pred eeeCCCCcEEEEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCccccccc
Q 001544 900 VLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEM 979 (1057)
Q Consensus 900 ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~ 979 (1057)
|++|.+|++||+|||+++.-. -.........||+.|+|||++....|+..+|-|||||++|||+.|++||+...+.+
T Consensus 481 vmLd~eGHiKi~DFGmcKEni--~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e- 557 (683)
T KOG0696|consen 481 VMLDSEGHIKIADFGMCKENI--FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE- 557 (683)
T ss_pred eEeccCCceEeeecccccccc--cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHH-
Confidence 999999999999999997421 12233345679999999999999999999999999999999999999998732211
Q ss_pred chhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCC
Q 001544 980 TLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERI 1035 (1057)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 1035 (1057)
+ ...+.+.. ...+..++.+..++....+...|.+|.
T Consensus 558 -l-----------F~aI~ehn--------vsyPKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 558 -L-----------FQAIMEHN--------VSYPKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred -H-----------HHHHHHcc--------CcCcccccHHHHHHHHHHhhcCCcccc
Confidence 1 11222211 122345677888999999999999997
No 393
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=4.7e-32 Score=267.04 Aligned_cols=248 Identities=27% Similarity=0.354 Sum_probs=188.6
Q ss_pred CceeccccCeEEEEEEe-cCCcEEEEEEeeccc-hhHHHHHHHHHHHHHh-cCCCCceeEeeeeccCCeeEEEEEEccCC
Q 001544 774 NNLIGRGSFGSVYIARL-QNGIEVAVKTFDLQH-ERAFKSFDTECEVMKS-IRHRNLTKIISSCSNEDFKALILEYMRNG 850 (1057)
Q Consensus 774 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lV~E~~~~g 850 (1057)
...||.|+||+|+|-.. +.|+..|||+++... ....+++..|.++..+ -+.||||+++|.+-.++..++.||.|+-
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~- 147 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI- 147 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh-
Confidence 46799999999999864 479999999997554 3556778888877544 4799999999988777777899999965
Q ss_pred ChhHHHh---c-CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 851 SLEKCLY---S-GNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 851 sL~~~l~---~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
+++.+.. . ....+++.-.-.|..-.+.||.||-+ ...|+|||+||+|||++..|.+|+||||.+..+. .+.
T Consensus 148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv---~Si 222 (361)
T KOG1006|consen 148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLV---DSI 222 (361)
T ss_pred hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHH---HHH
Confidence 7766432 1 23458888888899999999999986 6789999999999999999999999999998763 234
Q ss_pred ccccccccccccCccccCCC--CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhh--hcccc
Q 001544 927 TQTQTLATLGYMAPEYGREG--RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKII--DANLL 1002 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~~~~--~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 1002 (1057)
..+..+|-..|||||-+... .++-++||||+|+++||+.||..|+.. |-..+. .+..++ |+...
T Consensus 223 AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~----------w~svfe--ql~~Vv~gdpp~l 290 (361)
T KOG1006|consen 223 AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRK----------WDSVFE--QLCQVVIGDPPIL 290 (361)
T ss_pred HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcch----------HHHHHH--HHHHHHcCCCCee
Confidence 45556777889999987543 478899999999999999999999765 211100 011111 01000
Q ss_pred cccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1003 ITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
... ....+.+..+..++..|+..|-..||.+.++.++
T Consensus 291 ~~~----~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 291 LFD----KECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred cCc----ccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 000 0112467789999999999999999999998764
No 394
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=5.7e-30 Score=295.02 Aligned_cols=265 Identities=18% Similarity=0.252 Sum_probs=183.8
Q ss_pred HhCCCCCCceeccccCeEEEEEEe-----------------cCCcEEEEEEeeccchhHHHH--------------HHHH
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARL-----------------QNGIEVAVKTFDLQHERAFKS--------------FDTE 815 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~~--------------~~~E 815 (1057)
..++|++.++||+|+||+||+|.. .+++.||||++........++ ...|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 356899999999999999999963 235789999986543322222 3346
Q ss_pred HHHHHhcCCCCc-----eeEeeeecc--------CCeeEEEEEEccCCChhHHHhcCC----------------------
Q 001544 816 CEVMKSIRHRNL-----TKIISSCSN--------EDFKALILEYMRNGSLEKCLYSGN---------------------- 860 (1057)
Q Consensus 816 ~~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lV~E~~~~gsL~~~l~~~~---------------------- 860 (1057)
+.++.+++|.++ ++++++|.. ++..++||||+++++|.++++...
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777766554 677777643 356799999999999999886421
Q ss_pred -ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccccccccccccC
Q 001544 861 -YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATLGYMA 939 (1057)
Q Consensus 861 -~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~a 939 (1057)
...++..+..++.|+++|++|+| +.+|+||||||+||+++.++.+||+|||+++.+.... ........+++.|+|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~-~~~~~~g~~tp~Y~a 378 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI-NFNPLYGMLDPRYSP 378 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCC-ccCccccCCCcceeC
Confidence 12467788899999999999999 8999999999999999999999999999997653221 112222345789999
Q ss_pred ccccCCCCC----------------------CccchHHHHHHHHHHHhhCCC-CCCcccccccchhhhhhhccchhHHHh
Q 001544 940 PEYGREGRV----------------------STKGDVYSFGILLMETFTRRK-PTDEIFSGEMTLKHWVNDFLPISMMKI 996 (1057)
Q Consensus 940 PE~~~~~~~----------------------~~~~Dv~s~G~il~elltg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1057)
||.+..... ..+.||||+||++|||++|.. ||.....-......+-.... ....
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~---~~r~ 455 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLN---RWRM 455 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHH---HHHh
Confidence 998653321 134799999999999999975 66432111111111000000 0000
Q ss_pred hhcccccccchhhHHHHHHHHHHHHHHhHcccCCC---CCCCCHHHHHHH
Q 001544 997 IDANLLITEDKHFAAKEQCASSVFNLAMECTVESP---DERITAKEIVRR 1043 (1057)
Q Consensus 997 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP---~~Rps~~evl~~ 1043 (1057)
+ ......+......+....+++.+|+..+| .+|+|++|+++|
T Consensus 456 ~-----~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 456 Y-----KGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred h-----cccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 0 00111222233456788999999999866 689999999987
No 395
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=5e-30 Score=304.13 Aligned_cols=260 Identities=20% Similarity=0.249 Sum_probs=170.9
Q ss_pred HhCCCCCCceeccccCeEEEEEEec-C----CcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeee------ec
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARLQ-N----GIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISS------CS 835 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~------~~ 835 (1057)
..++|+..+.||+|+||.||+|+.. + +..||||++...... +....| .+....+.++..++.. ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 4678999999999999999999865 4 689999987543221 111111 1111122222222211 24
Q ss_pred cCCeeEEEEEEccCCChhHHHhcCCccC-------------------CHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCC
Q 001544 836 NEDFKALILEYMRNGSLEKCLYSGNYIL-------------------DIFQRLNIMIDVASALEYLHFGYSAPVIHCDLK 896 (1057)
Q Consensus 836 ~~~~~~lV~E~~~~gsL~~~l~~~~~~l-------------------~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 896 (1057)
.++..++||||+++++|.+++....... ....+..++.|++.||+||| +++|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEeCcCC
Confidence 5678899999999999999887543211 12345679999999999999 8999999999
Q ss_pred CCCeeeCC-CCcEEEEcccccccccCCCCccccccccccccccCccccCCC----------------------CCCccch
Q 001544 897 PSNVLLDD-NMVAHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREG----------------------RVSTKGD 953 (1057)
Q Consensus 897 p~Nill~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~----------------------~~~~~~D 953 (1057)
|+|||++. ++.+||+|||+|+.+.... ........++++|+|||.+... .++.++|
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~-~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGI-NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCcccccccc-ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 99999985 6899999999998653222 2233445788999999954322 2344679
Q ss_pred HHHHHHHHHHHhhCCCCCCccc--------ccccchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhH
Q 001544 954 VYSFGILLMETFTRRKPTDEIF--------SGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAME 1025 (1057)
Q Consensus 954 v~s~G~il~elltg~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 1025 (1057)
|||+||++|||+++..|++... ..+.....|... ............+........+..+|+.+
T Consensus 362 VwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~d~~~~~~~dLi~~ 432 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKL---------VEPRASPDLRRGFEVLDLDGGAGWELLKS 432 (566)
T ss_pred cHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHh---------hccccchhhhhhhhhccccchHHHHHHHH
Confidence 9999999999999877654310 001111222111 11100000000000001112345689999
Q ss_pred cccCCCCCCCCHHHHHHH
Q 001544 1026 CTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1026 cl~~dP~~Rps~~evl~~ 1043 (1057)
|++.||++|||+.|+++|
T Consensus 433 mL~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 433 MMRFKGRQRISAKAALAH 450 (566)
T ss_pred HccCCcccCCCHHHHhCC
Confidence 999999999999999987
No 396
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=4.5e-31 Score=298.69 Aligned_cols=245 Identities=26% Similarity=0.395 Sum_probs=191.7
Q ss_pred CCCCceeccccCeE-EEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCCeeEEEEEEcc
Q 001544 771 FSENNLIGRGSFGS-VYIARLQNGIEVAVKTFDLQHERAFKSFDTECEVMKSI-RHRNLTKIISSCSNEDFKALILEYMR 848 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~~~ 848 (1057)
|...+++|.|+-|+ ||+|..+ |+.||||++-.. .....++|+..++.- +|||||++++.-.+....|++.|.|.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~ 586 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA 586 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence 34457799999985 6999987 889999998432 335667899999888 69999999999999999999999997
Q ss_pred CCChhHHHhcCCc---cCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC---C--CcEEEEccccccccc
Q 001544 849 NGSLEKCLYSGNY---ILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD---N--MVAHLSDFGIAKLLI 920 (1057)
Q Consensus 849 ~gsL~~~l~~~~~---~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~---~--~~~kl~Dfg~a~~~~ 920 (1057)
. +|++++..... .......+.+..|++.|+++|| +.+||||||||.||||+. + ..++|+|||+++.+.
T Consensus 587 ~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 587 C-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred h-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 6 99999987421 1111345788999999999999 999999999999999975 3 479999999999886
Q ss_pred CCCC-ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhC-CCCCCcccccccchhhhhhhccchhHHHhhh
Q 001544 921 GEDQ-SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTR-RKPTDEIFSGEMTLKHWVNDFLPISMMKIID 998 (1057)
Q Consensus 921 ~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1057)
.... ........||.||+|||.+....-+.++|+||+||++|+.++| .+||++....+..+..-...
T Consensus 663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~----------- 731 (903)
T KOG1027|consen 663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYT----------- 731 (903)
T ss_pred CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCccc-----------
Confidence 5443 2334567899999999999998889999999999999999997 88998754332222110000
Q ss_pred cccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 999 ANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
. .. .....++ +..++|.+|++++|..||+|.+|+.|
T Consensus 732 L-~~------L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 732 L-VH------LEPLPDC--EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred e-ee------eccCchH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 0 00 0001122 67899999999999999999999875
No 397
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=7.7e-30 Score=245.83 Aligned_cols=265 Identities=19% Similarity=0.296 Sum_probs=196.5
Q ss_pred HhCCCCCCceeccccCeEEEEEE-ecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcC-CCCceeEeeeeccC--CeeEE
Q 001544 767 ATNGFSENNLIGRGSFGSVYIAR-LQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIR-HRNLTKIISSCSNE--DFKAL 842 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~l 842 (1057)
..++|++.+++|+|.|+.||.|. ..+.++++||++++.. .+.+.+|+.++..++ ||||+++++...++ ....+
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL 112 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL 112 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence 45688999999999999999996 5578999999997543 467889999999997 99999999998764 56679
Q ss_pred EEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC-CCcEEEEcccccccccC
Q 001544 843 ILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD-NMVAHLSDFGIAKLLIG 921 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~Dfg~a~~~~~ 921 (1057)
|+||+++.+...... .++...+...+.+++.||.|+| +.||+|||+||.|+++|. .-.++++|+|+|.++.+
T Consensus 113 iFE~v~n~Dfk~ly~----tl~d~dIryY~~elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp 185 (338)
T KOG0668|consen 113 IFEYVNNTDFKQLYP----TLTDYDIRYYIYELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 185 (338)
T ss_pred HhhhhccccHHHHhh----hhchhhHHHHHHHHHHHHhHHH---hcCcccccCCcceeeechhhceeeeeecchHhhcCC
Confidence 999999988876543 3777788999999999999999 999999999999999994 56899999999998754
Q ss_pred CCCccccccccccccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcc
Q 001544 922 EDQSMTQTQTLATLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDAN 1000 (1057)
Q Consensus 922 ~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1057)
... ..-.+.+..|.-||.+.. ..++..-|+|||||++..|+..+.||-...+....+...+.-........-+...
T Consensus 186 ~~e---YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY 262 (338)
T KOG0668|consen 186 GKE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKY 262 (338)
T ss_pred Cce---eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHH
Confidence 432 233345567788997654 5678899999999999999999999743222222222222111111111111110
Q ss_pred cc-----------cccchhhHH------HHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 1001 LL-----------ITEDKHFAA------KEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1001 ~~-----------~~~~~~~~~------~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
.. .-...++.. ..-.+++..+++.+.+.+|.++||||+|+++|-
T Consensus 263 ~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~Hp 323 (338)
T KOG0668|consen 263 QIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHP 323 (338)
T ss_pred ccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCc
Confidence 00 000001110 112358899999999999999999999999873
No 398
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=4.5e-29 Score=268.35 Aligned_cols=239 Identities=30% Similarity=0.384 Sum_probs=193.4
Q ss_pred cCeEEEEEEec-CCcEEEEEEeeccchhH-HHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCCChhHHHhc
Q 001544 781 SFGSVYIARLQ-NGIEVAVKTFDLQHERA-FKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNGSLEKCLYS 858 (1057)
Q Consensus 781 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 858 (1057)
+||.||+|... +|+.||+|++....... .+.+.+|++.+++++|+|++++++++......++|+||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999876 58999999997654433 68899999999999999999999999998999999999999999999876
Q ss_pred CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcccccccccccccc
Q 001544 859 GNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATLGYM 938 (1057)
Q Consensus 859 ~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~ 938 (1057)
... +++.++..++.+++++++||| +.+++|+||+|+||+++.++.++++|||.+....... ......++..|+
T Consensus 81 ~~~-~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~ 153 (244)
T smart00220 81 RGR-LSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPEYM 153 (244)
T ss_pred ccC-CCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCcCCC
Confidence 544 889999999999999999999 8999999999999999999999999999998763321 233455788999
Q ss_pred CccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHH
Q 001544 939 APEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASS 1018 (1057)
Q Consensus 939 aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1018 (1057)
|||......++.++|||++|++++++++|..||......+. ..+......... ......++.+
T Consensus 154 ~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~-------------~~~~~~~~~~~~----~~~~~~~~~~ 216 (244)
T smart00220 154 APEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLE-------------LFKKIGKPKPPF----PPPEWKISPE 216 (244)
T ss_pred CHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-------------HHHHHhccCCCC----ccccccCCHH
Confidence 99999888889999999999999999999999865211110 111111000000 0000115677
Q ss_pred HHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1019 VFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1019 l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
+.+++.+|+..+|++||++.+++++
T Consensus 217 ~~~~i~~~l~~~p~~Rp~~~~~~~~ 241 (244)
T smart00220 217 AKDLIRKLLVKDPEKRLTAEEALQH 241 (244)
T ss_pred HHHHHHHHccCCchhccCHHHHhhC
Confidence 8999999999999999999999873
No 399
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.4e-29 Score=256.28 Aligned_cols=247 Identities=23% Similarity=0.327 Sum_probs=198.7
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc---chhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCCeeEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ---HERAFKSFDTECEVMKSI-RHRNLTKIISSCSNEDFKAL 842 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 842 (1057)
..+|...++||+|+|++|..++.. +.+.+|+|+++++ .++...-.+.|-.+..+. +||.+|.+..+|..+...++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 457889999999999999999854 6788999998754 344556677888888777 69999999999999999999
Q ss_pred EEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCC
Q 001544 843 ILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 922 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 922 (1057)
|.||++||+|--++++.++ ++++.+.-+..+|.-||.||| ++||+.||+|..|||+|..|++|+.|+|+++.-.
T Consensus 329 vieyv~ggdlmfhmqrqrk-lpeeharfys~ei~lal~flh---~rgiiyrdlkldnvlldaeghikltdygmcke~l-- 402 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEICLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL-- 402 (593)
T ss_pred EEEEecCcceeeehhhhhc-CcHHHhhhhhHHHHHHHHHHh---hcCeeeeeccccceEEccCCceeecccchhhcCC--
Confidence 9999999999777766654 889999999999999999999 9999999999999999999999999999997532
Q ss_pred CCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCccc--ccccchhhhhhhccchhHHHhhhcc
Q 001544 923 DQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIF--SGEMTLKHWVNDFLPISMMKIIDAN 1000 (1057)
Q Consensus 923 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1057)
......+...||+.|+|||++++..|...+|.|++||+++||+.|+.||+-.- .++..-++|... -+.+..
T Consensus 403 ~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfq-------vilekq 475 (593)
T KOG0695|consen 403 GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQ-------VILEKQ 475 (593)
T ss_pred CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHH-------HHhhhc
Confidence 22334456789999999999999999999999999999999999999998532 223332332221 111111
Q ss_pred cccccchhhHHHHHHHHHHHHHHhHcccCCCCCCC
Q 001544 1001 LLITEDKHFAAKEQCASSVFNLAMECTVESPDERI 1035 (1057)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 1035 (1057)
. ..+..++.....+++.-++.||.+|.
T Consensus 476 i--------riprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 476 I--------RIPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred c--------cccceeehhhHHHHHHhhcCCcHHhc
Confidence 1 11223455566788999999999986
No 400
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.9e-30 Score=276.49 Aligned_cols=249 Identities=23% Similarity=0.320 Sum_probs=202.4
Q ss_pred CCCCCceeccccCeEEEEEEecCCc-EEEEEEeecc---chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQNGI-EVAVKTFDLQ---HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~~~~-~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
+++....||-|+||.|-.+..+... .+|+|.+++. ++.+.+.+..|-.+|...+.|.||++|-.|.+++..|+.||
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE 500 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME 500 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence 4555667999999999999876433 4888887543 45566778889999999999999999999999999999999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
-|-||.++..++..+. ++..+..-++..+.+|++||| .++||+||+||+|.+++.+|.+|+.|||+|+.+.. .
T Consensus 501 aClGGElWTiLrdRg~-Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~---g 573 (732)
T KOG0614|consen 501 ACLGGELWTILRDRGS-FDDYTARFYVACVLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS---G 573 (732)
T ss_pred hhcCchhhhhhhhcCC-cccchhhhhHHHHHHHHHHHH---hcCceeccCChhheeeccCCceEEeehhhHHHhcc---C
Confidence 9999999999987664 888899999999999999999 99999999999999999999999999999998732 2
Q ss_pred cccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccccccc
Q 001544 926 MTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITE 1005 (1057)
Q Consensus 926 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1057)
...-..+||+.|.|||++.+..++.++|.||+|+++||+++|.+||....+-. ++.. +.+-+|
T Consensus 574 ~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmk-tYn~---------ILkGid------- 636 (732)
T KOG0614|consen 574 RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMK-TYNL---------ILKGID------- 636 (732)
T ss_pred CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHH-HHHH---------HHhhhh-------
Confidence 33344689999999999999999999999999999999999999997632110 0000 011111
Q ss_pred chhhHHHHHHHHHHHHHHhHcccCCCCCCCC-----HHHHHHHH
Q 001544 1006 DKHFAAKEQCASSVFNLAMECTVESPDERIT-----AKEIVRRL 1044 (1057)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~~L 1044 (1057)
.+..+..++....+++++.+...|.+|.. ..|+.+|-
T Consensus 637 --~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~ 678 (732)
T KOG0614|consen 637 --KIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHR 678 (732)
T ss_pred --hhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhh
Confidence 12223455667789999999999999985 66666553
No 401
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=9.3e-31 Score=258.01 Aligned_cols=266 Identities=23% Similarity=0.344 Sum_probs=195.0
Q ss_pred CCCceeccccCeEEEEEEec-CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccC-----CeeEEE
Q 001544 772 SENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNE-----DFKALI 843 (1057)
Q Consensus 772 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~lV 843 (1057)
+..+.||.|+||.||-+++. +|+.||.|++...- -.+.+++.+|+++++..+|.|+...++..... ++.|.|
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 34588999999999999865 79999999884332 24568899999999999999999888765432 356788
Q ss_pred EEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC
Q 001544 844 LEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 923 (1057)
+|.|. .+|.+.+-+.. .++...+.-+.+||++||.||| +.+|.||||||.|.+++.+..+||||||+++.. ..+
T Consensus 136 TELmQ-SDLHKIIVSPQ-~Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFGLARve-e~d 209 (449)
T KOG0664|consen 136 TELMQ-SDLHKIIVSPQ-ALTPDHVKVFVYQILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFGLARTW-DQR 209 (449)
T ss_pred HHHHH-hhhhheeccCC-CCCcchhhhhHHHHHhhhHHHh---hcchhhccCCCccEEeccCceEEeccccccccc-chh
Confidence 89884 48888776544 4788888999999999999999 999999999999999999999999999999865 334
Q ss_pred CccccccccccccccCccccCCC-CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHH-------
Q 001544 924 QSMTQTQTLATLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMK------- 995 (1057)
Q Consensus 924 ~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------- 995 (1057)
.....+..+.|..|+|||++.+. .|+.+.||||.||++.|++..+.-|..... ....+.+.+...-...+
T Consensus 210 ~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~P--iqQL~lItdLLGTPs~EaMr~ACE 287 (449)
T KOG0664|consen 210 DRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGP--IEQLQMIIDLLGTPSQEAMKYACE 287 (449)
T ss_pred hhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccCh--HHHHHHHHHHhCCCcHHHHHHHhh
Confidence 45566777889999999998876 478999999999999999998877654211 11111111111111111
Q ss_pred -----hhhcccccccc---hhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHH
Q 001544 996 -----IIDANLLITED---KHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLL 1045 (1057)
Q Consensus 996 -----~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1045 (1057)
+.......... .....+.....+...+...++..||++|.+..+++.+.-
T Consensus 288 GAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 288 GAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred hhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 11000000000 000111122346678899999999999999999988764
No 402
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.7e-28 Score=260.08 Aligned_cols=266 Identities=22% Similarity=0.264 Sum_probs=195.2
Q ss_pred CCCCCCceeccccCeEEEEEE-ecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcC-----C---CCceeEeeeec----
Q 001544 769 NGFSENNLIGRGSFGSVYIAR-LQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIR-----H---RNLTKIISSCS---- 835 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~l~~~~~---- 835 (1057)
.+|.+.++||-|.|++||+|. .++.+.||+|+.+.. +...+....||+++++++ | ..||++++.|.
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 578899999999999999996 457899999998643 344566788999999985 2 36999999984
Q ss_pred cCCeeEEEEEEccCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC---------
Q 001544 836 NEDFKALILEYMRNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN--------- 905 (1057)
Q Consensus 836 ~~~~~~lV~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~--------- 905 (1057)
.+.+.|+|+|++ |.+|..++.... .-++...+.+|++||+.||.|||. ..+|||.||||+|||+..+
T Consensus 157 NG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~--ecgIIHTDlKPENvLl~~~e~~~~~~~~ 233 (590)
T KOG1290|consen 157 NGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHR--ECGIIHTDLKPENVLLCSTEIDPAKDAR 233 (590)
T ss_pred CCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHH--hcCccccCCCcceeeeeccccchhhhhh
Confidence 467999999999 558888887655 458999999999999999999997 4599999999999998210
Q ss_pred --------------------------------------------------------------------------------
Q 001544 906 -------------------------------------------------------------------------------- 905 (1057)
Q Consensus 906 -------------------------------------------------------------------------------- 905 (1057)
T Consensus 234 ~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~~~ 313 (590)
T KOG1290|consen 234 EAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRINGNE 313 (590)
T ss_pred hhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCccc
Confidence
Q ss_pred -----------------------------------------------------------------------------CcE
Q 001544 906 -----------------------------------------------------------------------------MVA 908 (1057)
Q Consensus 906 -----------------------------------------------------------------------------~~~ 908 (1057)
-.+
T Consensus 314 ~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di~v 393 (590)
T KOG1290|consen 314 STVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDIRV 393 (590)
T ss_pred cchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCccceeE
Confidence 014
Q ss_pred EEEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccc-----cccchhh
Q 001544 909 HLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFS-----GEMTLKH 983 (1057)
Q Consensus 909 kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~-----~~~~~~~ 983 (1057)
||+|||-|.++ ....+..+.|..|+|||++.+..|++.+|+||++|++||++||..-|+.... ++..++.
T Consensus 394 KIaDlGNACW~-----~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~ 468 (590)
T KOG1290|consen 394 KIADLGNACWV-----HKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIAL 468 (590)
T ss_pred EEeeccchhhh-----hhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHH
Confidence 55555555543 2333445667889999999999999999999999999999999988874322 2222332
Q ss_pred hhhhcc--chh-------HHHhhhccccccc---ch----------hhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHH
Q 001544 984 WVNDFL--PIS-------MMKIIDANLLITE---DK----------HFAAKEQCASSVFNLAMECTVESPDERITAKEIV 1041 (1057)
Q Consensus 984 ~~~~~~--~~~-------~~~~~~~~~~~~~---~~----------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl 1041 (1057)
.+.... |.. ..+.+++...... -+ .+...++-..++.+++.-|++.+|++||||.+++
T Consensus 469 i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl 548 (590)
T KOG1290|consen 469 IMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCL 548 (590)
T ss_pred HHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHh
Confidence 221110 100 1122222111000 00 1122345578899999999999999999999999
Q ss_pred HH
Q 001544 1042 RR 1043 (1057)
Q Consensus 1042 ~~ 1043 (1057)
+|
T Consensus 549 ~h 550 (590)
T KOG1290|consen 549 KH 550 (590)
T ss_pred cC
Confidence 76
No 403
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=8.6e-29 Score=269.64 Aligned_cols=206 Identities=23% Similarity=0.352 Sum_probs=174.3
Q ss_pred CCCCCceeccccCeEEEEEE-ecCCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIAR-LQNGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
-|...+.||-|+||+|.+++ .++...||+|.+++.+ ..+....+.|-.||..-..+=||+++-.|.+++..|+|||
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd 709 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 709 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence 46778899999999999996 4557789999986553 3456778889999999999999999999999999999999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccc------
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL------ 919 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~------ 919 (1057)
|++||++-.++-+.+ .+++.-++-++.++..|+++.| ..|+|||||||+|||||.+|++|+.|||+++-+
T Consensus 710 YIPGGDmMSLLIrmg-IFeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHds 785 (1034)
T KOG0608|consen 710 YIPGGDMMSLLIRMG-IFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 785 (1034)
T ss_pred ccCCccHHHHHHHhc-cCHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEccCCceeeeeccccccceecccc
Confidence 999999998877655 4788888889999999999999 999999999999999999999999999998533
Q ss_pred ---cCCCCcc-------------------------------ccccccccccccCccccCCCCCCccchHHHHHHHHHHHh
Q 001544 920 ---IGEDQSM-------------------------------TQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETF 965 (1057)
Q Consensus 920 ---~~~~~~~-------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ell 965 (1057)
...+..+ .....+||+.|+|||++....++.-+|.||.|||+|||+
T Consensus 786 kYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~ 865 (1034)
T KOG0608|consen 786 KYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEML 865 (1034)
T ss_pred ccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHh
Confidence 1111000 001235899999999999999999999999999999999
Q ss_pred hCCCCCCccccccc
Q 001544 966 TRRKPTDEIFSGEM 979 (1057)
Q Consensus 966 tg~~p~~~~~~~~~ 979 (1057)
.|++||.+...++.
T Consensus 866 ~g~~pf~~~tp~~t 879 (1034)
T KOG0608|consen 866 VGQPPFLADTPGET 879 (1034)
T ss_pred hCCCCccCCCCCcc
Confidence 99999987655543
No 404
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.95 E-value=9.4e-29 Score=235.12 Aligned_cols=199 Identities=28% Similarity=0.351 Sum_probs=162.4
Q ss_pred CCCCceeccccCeEEEEEE-ecCCcEEEEEEeeccc-hhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCCeeEEEEEEc
Q 001544 771 FSENNLIGRGSFGSVYIAR-LQNGIEVAVKTFDLQH-ERAFKSFDTECEVMKSI-RHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
......||+|++|.|-+.+ .++|+..|||++.... .+..++...|+.+..+. .+|.+|+++|.+......++.||.|
T Consensus 48 L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M 127 (282)
T KOG0984|consen 48 LVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM 127 (282)
T ss_pred hhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh
Confidence 3445679999999998886 5589999999996543 33446677788876555 6999999999988888889999999
Q ss_pred cCCChhHHHh---cCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCC
Q 001544 848 RNGSLEKCLY---SGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 924 (1057)
Q Consensus 848 ~~gsL~~~l~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 924 (1057)
+. +|+.+-. +.+..+++.-.-+|+..+.+|+.|||+ ...|+|||+||+|||++.+|++|+||||.+.++. .
T Consensus 128 ~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~---d 201 (282)
T KOG0984|consen 128 DT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYLV---D 201 (282)
T ss_pred hh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceeeh---h
Confidence 65 8876543 345668999999999999999999995 5689999999999999999999999999998763 2
Q ss_pred ccccccccccccccCccccCC----CCCCccchHHHHHHHHHHHhhCCCCCCccc
Q 001544 925 SMTQTQTLATLGYMAPEYGRE----GRVSTKGDVYSFGILLMETFTRRKPTDEIF 975 (1057)
Q Consensus 925 ~~~~~~~~~t~~y~aPE~~~~----~~~~~~~Dv~s~G~il~elltg~~p~~~~~ 975 (1057)
+...+...|--.|||||.+.. ..|+-|+||||+|+.+.||.+++.||+...
T Consensus 202 SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~ 256 (282)
T KOG0984|consen 202 SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG 256 (282)
T ss_pred hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence 333344556667999997653 368889999999999999999999987633
No 405
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=2.6e-28 Score=247.89 Aligned_cols=261 Identities=25% Similarity=0.314 Sum_probs=197.9
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeecc--chhHHHHHHHHHHHHHhcCCCCceeEeeeeccC------C
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQ--HERAFKSFDTECEVMKSIRHRNLTKIISSCSNE------D 838 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 838 (1057)
..+|...+.+|.|.- .|..|.+. .+++||+|..... .....++..+|..++..+.|+||++++.+|... .
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 456777889999998 66666433 5899999987433 234457788999999999999999999998543 4
Q ss_pred eeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccccccc
Q 001544 839 FKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 918 (1057)
Q Consensus 839 ~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 918 (1057)
..|+|||||+. +|...++ ..++-.+...|..|++.|+.||| +.+|+||||||+||++..++.+||.|||+|+.
T Consensus 95 e~y~v~e~m~~-nl~~vi~---~elDH~tis~i~yq~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 95 EVYLVMELMDA-NLCQVIL---MELDHETISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILDFGLART 167 (369)
T ss_pred hHHHHHHhhhh-HHHHHHH---HhcchHHHHHHHHHHHHHHHHHH---hcceeecccCcccceecchhheeeccchhhcc
Confidence 67999999965 8888776 23677888999999999999999 99999999999999999999999999999985
Q ss_pred ccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhcc-----chhH
Q 001544 919 LIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFL-----PISM 993 (1057)
Q Consensus 919 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~-----~~~~ 993 (1057)
- +.....+.++.|..|+|||++.+..+.+.+||||.||++.||++|+.-|. ++..+.+|.+... ..+.
T Consensus 168 e---~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~----g~d~idQ~~ki~~~lgtpd~~F 240 (369)
T KOG0665|consen 168 E---DTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFP----GKDHIDQWNKIIEQLGTPDPSF 240 (369)
T ss_pred c---CcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEec----CchHHHHHHHHHHHhcCCCHHH
Confidence 3 33356778889999999999988889999999999999999999998653 5555666654221 1111
Q ss_pred HH-hhhc----------ccccccchhhHH---------HHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 994 MK-IIDA----------NLLITEDKHFAA---------KEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 994 ~~-~~~~----------~~~~~~~~~~~~---------~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.+ ..+. .........++. .+--...+.+++.+|+..+|++|.++.++++|
T Consensus 241 ~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 241 MKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred HHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 11 0000 000000000000 00112457899999999999999999999986
No 406
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=1.7e-26 Score=242.26 Aligned_cols=211 Identities=35% Similarity=0.571 Sum_probs=184.2
Q ss_pred eccccCeEEEEEEecC-CcEEEEEEeeccchh-HHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCCChhH
Q 001544 777 IGRGSFGSVYIARLQN-GIEVAVKTFDLQHER-AFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNGSLEK 854 (1057)
Q Consensus 777 lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~~ 854 (1057)
||+|++|.||++...+ ++.++||++...... ..+.+.+|++.++.++|++++++++++......++|+||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999998764 899999999755432 45788999999999999999999999999899999999999999999
Q ss_pred HHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC-CCcEEEEcccccccccCCCCccccccccc
Q 001544 855 CLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD-NMVAHLSDFGIAKLLIGEDQSMTQTQTLA 933 (1057)
Q Consensus 855 ~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 933 (1057)
++......+++..+..++.+++++++||| +.+++|+||+|.||+++. ++.++++|||.+........ ......+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~ 155 (215)
T cd00180 81 LLKENEGKLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTIVG 155 (215)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhcccC
Confidence 98876446899999999999999999999 899999999999999999 89999999999986532211 2333457
Q ss_pred cccccCccccCCC-CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHHH
Q 001544 934 TLGYMAPEYGREG-RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAK 1012 (1057)
Q Consensus 934 t~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1057)
...|++||..... ..+.++|+|++|++++++
T Consensus 156 ~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------------ 187 (215)
T cd00180 156 TPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------------ 187 (215)
T ss_pred CCCccChhHhcccCCCCchhhhHHHHHHHHHH------------------------------------------------
Confidence 7889999998777 788999999999999998
Q ss_pred HHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 1013 EQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1013 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
.++.+++.+|++.+|++||++.++++++
T Consensus 188 ----~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ----PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ----HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 3467899999999999999999998763
No 407
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=1.3e-28 Score=271.21 Aligned_cols=254 Identities=24% Similarity=0.379 Sum_probs=205.1
Q ss_pred hCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 768 TNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 768 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
.++|+....+|+|.||.||||++. +++..|||+++......++-++.|+-+++..+||||+.++|.+...+..+++|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 457888999999999999999855 6999999999988888888899999999999999999999999999999999999
Q ss_pred ccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcc
Q 001544 847 MRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSM 926 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 926 (1057)
+.+|+|++.-+-. .++++.++..+++...+|++||| +.+-+|||||-.||++++.|.+|++|||.+..+.. .-.
T Consensus 94 cgggslQdiy~~T-gplselqiayvcRetl~gl~ylh---s~gk~hRdiKGanilltd~gDvklaDfgvsaqita--ti~ 167 (829)
T KOG0576|consen 94 CGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLADFGVSAQITA--TIA 167 (829)
T ss_pred cCCCcccceeeec-ccchhHHHHHHHhhhhccchhhh---cCCcccccccccceeecccCceeecccCchhhhhh--hhh
Confidence 9999999965543 46999999999999999999999 99999999999999999999999999999876632 222
Q ss_pred ccccccccccccCcccc---CCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhccccc
Q 001544 927 TQTQTLATLGYMAPEYG---REGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLI 1003 (1057)
Q Consensus 927 ~~~~~~~t~~y~aPE~~---~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1057)
......||+.|||||+. +.+.|..++|||+.|+...|+-.-++|.-+.. +.....+.-.. .
T Consensus 168 KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlh--------------pmr~l~LmTkS--~ 231 (829)
T KOG0576|consen 168 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLH--------------PMRALFLMTKS--G 231 (829)
T ss_pred hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccc--------------hHHHHHHhhcc--C
Confidence 33456899999999964 45668899999999999999988887732211 11111111100 0
Q ss_pred ccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 1004 TEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 1004 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.............+.+.++++.|+..+|++||++..+++|
T Consensus 232 ~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 232 FQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred CCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence 1111122223345678899999999999999999988774
No 408
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94 E-value=7.4e-28 Score=260.88 Aligned_cols=198 Identities=23% Similarity=0.346 Sum_probs=169.4
Q ss_pred HhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhH-----HHHHHHHHHHHHhcC---CCCceeEeeee
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERA-----FKSFDTECEVMKSIR---HRNLTKIISSC 834 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~-----~~~~~~E~~~l~~l~---h~niv~l~~~~ 834 (1057)
...+|+..+.+|+|+||.|+.|..+ +...|+||.+.++. +.+ .-.+-.|+++|..++ |+||++++++|
T Consensus 559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF 638 (772)
T KOG1152|consen 559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF 638 (772)
T ss_pred ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence 3457999999999999999999866 56789999986542 111 123456999999997 99999999999
Q ss_pred ccCCeeEEEEEEc-cCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcc
Q 001544 835 SNEDFKALILEYM-RNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDF 913 (1057)
Q Consensus 835 ~~~~~~~lV~E~~-~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 913 (1057)
++++.+|++||-. ++.+|.+++..+. .+++.++.-|++||+.|+++|| +.+|||||||-+||.++.+|.+|++||
T Consensus 639 Eddd~yyl~te~hg~gIDLFd~IE~kp-~m~E~eAk~IFkQV~agi~hlh---~~~ivhrdikdenvivd~~g~~klidf 714 (772)
T KOG1152|consen 639 EDDDYYYLETEVHGEGIDLFDFIEFKP-RMDEPEAKLIFKQVVAGIKHLH---DQGIVHRDIKDENVIVDSNGFVKLIDF 714 (772)
T ss_pred ecCCeeEEEecCCCCCcchhhhhhccC-ccchHHHHHHHHHHHhcccccc---ccCceecccccccEEEecCCeEEEeec
Confidence 9999999999985 4558899887655 4999999999999999999999 999999999999999999999999999
Q ss_pred cccccccCCCCccccccccccccccCccccCCCCC-CccchHHHHHHHHHHHhhCCCCCC
Q 001544 914 GIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRV-STKGDVYSFGILLMETFTRRKPTD 972 (1057)
Q Consensus 914 g~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~Dv~s~G~il~elltg~~p~~ 972 (1057)
|.|.+.. ..+....+||.+|.|||++.+..| +..-|||++|+++|-++...-||.
T Consensus 715 gsaa~~k----sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 715 GSAAYTK----SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred cchhhhc----CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9998752 334456689999999999998877 567899999999999998888874
No 409
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.94 E-value=2.1e-27 Score=251.07 Aligned_cols=272 Identities=25% Similarity=0.317 Sum_probs=204.3
Q ss_pred HHHHhCCCCCCceeccccCeEEEEEEec----CCcEEEEEEeeccchhHHHHHHHHHHHHHhcC-CCCceeEeeeeccCC
Q 001544 764 LFQATNGFSENNLIGRGSFGSVYIARLQ----NGIEVAVKTFDLQHERAFKSFDTECEVMKSIR-HRNLTKIISSCSNED 838 (1057)
Q Consensus 764 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~ 838 (1057)
.....+.|..+++||+|.|++||+|.+. ..+.||+|.+...... .++.+|++++..+. +.||+++.+++...+
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p--~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP--SRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc--hHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 3445677899999999999999999743 4688999998654433 56889999999994 999999999999999
Q ss_pred eeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC-CCCcEEEEcccccc
Q 001544 839 FKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAK 917 (1057)
Q Consensus 839 ~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~-~~~~~kl~Dfg~a~ 917 (1057)
...+|+||++.....++... ++..++..+++.+..||+++| ..|||||||||+|++.+ ..+.-.|.|||+|.
T Consensus 109 ~v~ivlp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~ 181 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQ 181 (418)
T ss_pred eeEEEecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhhh---ccCccccCCCccccccccccCCceEEechhHH
Confidence 99999999999999888764 678889999999999999999 99999999999999998 56788999999997
Q ss_pred cccCCC------------------------------------------CccccccccccccccCccccC-CCCCCccchH
Q 001544 918 LLIGED------------------------------------------QSMTQTQTLATLGYMAPEYGR-EGRVSTKGDV 954 (1057)
Q Consensus 918 ~~~~~~------------------------------------------~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Dv 954 (1057)
.+.... .....-...||+||+|||++. .+..+.++||
T Consensus 182 ~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDi 261 (418)
T KOG1167|consen 182 RYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDI 261 (418)
T ss_pred HHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccce
Confidence 321100 000011235899999999765 4667899999
Q ss_pred HHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhh---hc---------------------c----ccc-cc
Q 001544 955 YSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKII---DA---------------------N----LLI-TE 1005 (1057)
Q Consensus 955 ~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---------------------~----~~~-~~ 1005 (1057)
||.||+++-+++++.||-....+-..+.+.+..+.+..+.+.- +. . ... ..
T Consensus 262 ws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q 341 (418)
T KOG1167|consen 262 WSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQ 341 (418)
T ss_pred eeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccc
Confidence 9999999999999999866544444444443333222222110 00 0 000 00
Q ss_pred --chhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 1006 --DKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1006 --~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
..........+..+.+++.+|++.+|.+|.|++|+++|-
T Consensus 342 ~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHp 382 (418)
T KOG1167|consen 342 PNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHP 382 (418)
T ss_pred cceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCc
Confidence 001111122345789999999999999999999999874
No 410
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.94 E-value=6.4e-29 Score=258.21 Aligned_cols=409 Identities=26% Similarity=0.261 Sum_probs=289.8
Q ss_pred EEEccCCCCcCCccccccCcCCCcEEeeeccccccccCccccccccccEEEeecCccccccCccccccccccEEEecC-C
Q 001544 245 ILDLSFNDLWGDIPKEIGNLTKLKELFLDFNILQGEIPHTVGNLHNLEYLSLVNNELVGTVPATIFNVSTLKLIELSN-N 323 (1057)
Q Consensus 245 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~-N 323 (1057)
..|-++-.++ .+|..+. +.-.+++|..|+|+...|.+|+.+++|+.||||+|.|+.+.|.+|.++.+|..|.+-+ |
T Consensus 50 ~VdCr~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~N 126 (498)
T KOG4237|consen 50 IVDCRGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNN 126 (498)
T ss_pred eEEccCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCC
Confidence 4555666665 5665554 4667889999999987788899999999999999999999999999998888776655 8
Q ss_pred ccccCCCCCcccCCCCCceEEecCccccccCCccccccccccccccccccccccccchhcccccccEEeccCcccCCC-c
Q 001544 324 TFFGSLPSSTDVQLPNLEELYLWGNNFSGTLPSFIFNASNLSKLSLGDNSFSGLIPNTFGNLRNLKRLRLYNNYLTSP-E 402 (1057)
Q Consensus 324 ~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~ 402 (1057)
+|+ .+|...|.++..|+.|.+.-|++.-...+.|..+++|..|.+.+|.+..+.-.+|..+.+++.+++..|.+... .
T Consensus 127 kI~-~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCn 205 (498)
T KOG4237|consen 127 KIT-DLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCN 205 (498)
T ss_pred chh-hhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccc
Confidence 886 88999999999999999999999988888899999999999999999876556899999999999999884321 0
Q ss_pred ccc--------ccccCCCcchhhhhccCCCcccccccccccccccccEEEcCCCccccccc-ccccCccCCcEEEccCCc
Q 001544 403 LSF--------LSSLSNCKYLEIIALSGNPLNGIIPMSAGNLSHSLEELFMPDCNVSGRIP-KEIGNLANLVTLDLGGNK 473 (1057)
Q Consensus 403 ~~~--------~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~l~~n~~~~~~p-~~~~~l~~L~~L~Ls~N~ 473 (1057)
..+ ...+....-..-..+.++.+..+.+..+.....++..-..+.+...+..| ..|..+++|+.|+|++|+
T Consensus 206 L~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~ 285 (498)
T KOG4237|consen 206 LPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNK 285 (498)
T ss_pred cchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCc
Confidence 000 00111112222223333444333333332222222222334444444444 568899999999999999
Q ss_pred CCCCCCcccccccccceeecccccCcccCCcccccccccceEEecCeeeeecCCccccCcccccccccCCcccccccc--
Q 001544 474 FNGSIPIALGKLQKLQLLNLDDNKLEGSIPDDICGLVELYKLALGDNKLSGQIPACFGNLASLRELWLGPNELISFIP-- 551 (1057)
Q Consensus 474 i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-- 551 (1057)
|+++-+.+|.++..++.|+|..|+|..+....|.++..|+.|+|++|+|+...|.+|..+.+|.+|.|-.|.+.---.
T Consensus 286 i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~ 365 (498)
T KOG4237|consen 286 ITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLA 365 (498)
T ss_pred cchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchH
Confidence 999999999999999999999999998888999999999999999999999999999999999999998886532100
Q ss_pred ---ccc-----------cccccccEEEeccccccCC---Cchhhc---------cccccce-eccccccccccccccccC
Q 001544 552 ---STF-----------WNIKDIMYVNFSSNFLTGP---LPLEIE---------NLKALTT-LDFSMNNLSGVIPTTIGG 604 (1057)
Q Consensus 552 ---~~~-----------~~l~~L~~L~Ls~N~l~~~---~p~~~~---------~l~~L~~-L~Ls~N~l~~~~p~~~~~ 604 (1057)
+|+ ..-..++.+.++.+.+... .|++.. ..+-+.+ ...|++.++ .+|..+.
T Consensus 366 wl~~Wlr~~~~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk-~lp~~iP- 443 (498)
T KOG4237|consen 366 WLGEWLRKKSVVGNPRCQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLK-LLPRGIP- 443 (498)
T ss_pred HHHHHHhhCCCCCCCCCCCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchh-hcCCCCC-
Confidence 000 0112233444444433311 111111 1122222 233444443 4554443
Q ss_pred ccccceecccccccccccCccccccCccceecccCccccCCCcccccCcccccccccCCC
Q 001544 605 LKGLQYLFLGHNRLQGSIPDSVGDLISLKSLNLSNNNLSGPIPTSLEKLSDLKELNLSFN 664 (1057)
Q Consensus 605 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N 664 (1057)
..-..|++.+|.++ .+|++ .+.+| .+|||+|+++..--..|.+++.|.+|-||+|
T Consensus 444 -~d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 444 -VDVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred -chhHHHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 45667888999988 77776 66778 8899999988666677888888888888876
No 411
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=2e-25 Score=237.01 Aligned_cols=199 Identities=29% Similarity=0.434 Sum_probs=172.8
Q ss_pred CCCCceeccccCeEEEEEEecC-CcEEEEEEeeccchh-HHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEcc
Q 001544 771 FSENNLIGRGSFGSVYIARLQN-GIEVAVKTFDLQHER-AFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMR 848 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 848 (1057)
|+..+.||+|++|.||+|...+ ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++...+..++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4567899999999999998764 899999999765544 56889999999999999999999999998899999999999
Q ss_pred CCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcccc
Q 001544 849 NGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQ 928 (1057)
Q Consensus 849 ~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 928 (1057)
+++|.+++......+++..+..++.++++++.||| +.+++|+|++|.||+++.++.++++|||.+........ ...
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~-~~~ 156 (225)
T smart00221 81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA-ALL 156 (225)
T ss_pred CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc-ccc
Confidence 99999998775543789999999999999999999 88999999999999999999999999999987643221 122
Q ss_pred ccccccccccCcccc-CCCCCCccchHHHHHHHHHHHhhCCCCCCc
Q 001544 929 TQTLATLGYMAPEYG-REGRVSTKGDVYSFGILLMETFTRRKPTDE 973 (1057)
Q Consensus 929 ~~~~~t~~y~aPE~~-~~~~~~~~~Dv~s~G~il~elltg~~p~~~ 973 (1057)
....++..|++||.. ....++.++|||++|++++||++|+.||..
T Consensus 157 ~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 157 KTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 334567789999988 666778899999999999999999999854
No 412
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.93 E-value=4.1e-28 Score=252.23 Aligned_cols=417 Identities=21% Similarity=0.248 Sum_probs=289.8
Q ss_pred EeeecccCcccccccccCCCCCcEEeCCCCCccccCCcccccccccceeecccccccCCCCccccccCCCCeEeccC-CC
Q 001544 76 LNISYLSLTGNIPRQLGNLSSLEILDLNFNRLSGEIPWELGNLAKLEKLLLHNNFLTGTIPFSIFKLSSLLDLKLSD-NN 154 (1057)
Q Consensus 76 l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~-n~ 154 (1057)
++-++-+|+ .+|..+- +.-.+++|..|+|+...|..|+.+++|++||||+|+|+.+-|.+|.++.+|..|-+-+ |+
T Consensus 51 VdCr~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~Nk 127 (498)
T KOG4237|consen 51 VDCRGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNK 127 (498)
T ss_pred EEccCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCc
Confidence 345555666 5555432 3457899999999977777899999999999999999999999999999988876655 89
Q ss_pred CCCCCCcccccCCCCCceeEccCCcccccCchhhhccccCCeeEeeccCCccccCccccCCCCcccEEEeeccccc----
Q 001544 155 LTGTIPSHNLGNLSSLQLLDLSDNQLSGSIPSFIFKISSLQALHFGNNRLSGELPANICDNLPFLNFFSVYKNMFY---- 230 (1057)
Q Consensus 155 l~~~~p~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~l~~n~~~---- 230 (1057)
|+ .+|...|++|..|+.|.+.-|++.-...++|..+++|..|.+.+|.+. .+++..+..+..++.+.+..|.+.
T Consensus 128 I~-~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icdCn 205 (498)
T KOG4237|consen 128 IT-DLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICDCN 205 (498)
T ss_pred hh-hhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccccccc
Confidence 98 889999999999999999999999888899999999999999999997 788878888888999988888732
Q ss_pred --------cCccccccCCCCCcEEEccCCCCcCCccccccC-cCCCcEEeeeccccccccC-ccccccccccEEEeecCc
Q 001544 231 --------GGISSTLSNCKHLRILDLSFNDLWGDIPKEIGN-LTKLKELFLDFNILQGEIP-HTVGNLHNLEYLSLVNNE 300 (1057)
Q Consensus 231 --------~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~-l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~ 300 (1057)
...+..++..+...-..+.++++...-+..|.. +..+..=..+.+..-+..| ..|.+|++|+.|+|++|+
T Consensus 206 L~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~ 285 (498)
T KOG4237|consen 206 LPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNK 285 (498)
T ss_pred cchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCc
Confidence 234455566666666666666665443433332 1222222223333333444 468899999999999999
Q ss_pred cccccCccccccccccEEEecCCccccCCCCCcccCCCCCceEEecCccccccCCcccccccccccccccccccccc---
Q 001544 301 LVGTVPATIFNVSTLKLIELSNNTFFGSLPSSTDVQLPNLEELYLWGNNFSGTLPSFIFNASNLSKLSLGDNSFSGL--- 377 (1057)
Q Consensus 301 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--- 377 (1057)
|+++-+.+|.++..+++|.|..|++. .+....|.++.+|+.|+|.+|+|+..-|.+|..+..|.+|+|-.|.+.--
T Consensus 286 i~~i~~~aFe~~a~l~eL~L~~N~l~-~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l 364 (498)
T KOG4237|consen 286 ITRIEDGAFEGAAELQELYLTRNKLE-FVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRL 364 (498)
T ss_pred cchhhhhhhcchhhhhhhhcCcchHH-HHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccch
Confidence 99988999999999999999999986 67777888899999999999999988899998899999999887766421
Q ss_pred --ccchhcc-----------cccccEEeccCcccCCCccccccccCCCcchhhhhccCCCcccccccccccccccccEEE
Q 001544 378 --IPNTFGN-----------LRNLKRLRLYNNYLTSPELSFLSSLSNCKYLEIIALSGNPLNGIIPMSAGNLSHSLEELF 444 (1057)
Q Consensus 378 --~~~~~~~-----------l~~L~~L~L~~N~l~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~ 444 (1057)
..+++.+ -..++.+.++.+.+.+.......... +.-.+.-|..- +-+....
T Consensus 365 ~wl~~Wlr~~~~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~------------~~~s~~cP~~c----~c~~tVv 428 (498)
T KOG4237|consen 365 AWLGEWLRKKSVVGNPRCQSPGFVRQIPISDVAFGDFRCGGPEELG------------CLTSSPCPPPC----TCLDTVV 428 (498)
T ss_pred HHHHHHHhhCCCCCCCCCCCCchhccccchhccccccccCCccccC------------CCCCCCCCCCc----chhhhhH
Confidence 1112111 11233333433333322111000000 00000000000 0111111
Q ss_pred cCCCcccccccccccCccCCcEEEccCCcCCCCCCcccccccccceeecccccCcccCCcccccccccceEEecCe
Q 001544 445 MPDCNVSGRIPKEIGNLANLVTLDLGGNKFNGSIPIALGKLQKLQLLNLDDNKLEGSIPDDICGLVELYKLALGDN 520 (1057)
Q Consensus 445 l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 520 (1057)
=-.|.....+|..+. ...++|++.+|.++ .+|.. .+..| .+++++|++.......|.++++|.+|-|++|
T Consensus 429 RcSnk~lk~lp~~iP--~d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 429 RCSNKLLKLLPRGIP--VDVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred hhcccchhhcCCCCC--chhHHHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 111222223444332 35677888888888 56666 56677 8889999888777788888999988888876
No 413
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.93 E-value=2.4e-26 Score=245.95 Aligned_cols=198 Identities=25% Similarity=0.287 Sum_probs=166.6
Q ss_pred HhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCC------CCceeEeeeeccCCe
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRH------RNLTKIISSCSNEDF 839 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~l~~~~~~~~~ 839 (1057)
.-.+|.+....|+|-|++|.+|... .|..||||++..... ..+.=.+|+++|+++.. -|+++++-.|....+
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH 508 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH 508 (752)
T ss_pred hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence 4568888889999999999999865 488999999975532 23444679999999952 488999999999999
Q ss_pred eEEEEEEccCCChhHHHhcCC--ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC-CcEEEEccccc
Q 001544 840 KALILEYMRNGSLEKCLYSGN--YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN-MVAHLSDFGIA 916 (1057)
Q Consensus 840 ~~lV~E~~~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~Dfg~a 916 (1057)
.|+|||-+.- +|.+++.+-+ .-+....+..++.|+.-||..|- ..+|+|.||||.|||+++. ..+||||||.|
T Consensus 509 LClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA 584 (752)
T KOG0670|consen 509 LCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNESKNILKLCDFGSA 584 (752)
T ss_pred eEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHH---hcCeeecccCccceEeccCcceeeeccCccc
Confidence 9999998854 8999887654 34778889999999999999999 9999999999999999865 57899999999
Q ss_pred ccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCc
Q 001544 917 KLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDE 973 (1057)
Q Consensus 917 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~ 973 (1057)
..... ...+.+..+..|.|||++.+-.|+...|+||.||++||+.||+.-|.+
T Consensus 585 ~~~~e----neitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG 637 (752)
T KOG0670|consen 585 SFASE----NEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPG 637 (752)
T ss_pred ccccc----ccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCC
Confidence 86522 233445556789999999999999999999999999999999987754
No 414
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=3e-26 Score=226.80 Aligned_cols=250 Identities=18% Similarity=0.266 Sum_probs=184.7
Q ss_pred CCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhc-CCCCceeEee-eeccCCeeEEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSI-RHRNLTKIIS-SCSNEDFKALILE 845 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~-~~~~~~~~~lV~E 845 (1057)
+.|.+.+.+|+|.||.+-.+..+ +.+.+++|.+..... ..++|.+|...--.+ .|.||+.-++ .|+..+.+++++|
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t-t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE 102 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT-TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE 102 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh-hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence 46888899999999999999754 678899999865433 358899998876666 5999998776 4677888899999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC--CCCcEEEEcccccccccCCC
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD--DNMVAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~--~~~~~kl~Dfg~a~~~~~~~ 923 (1057)
|++.|+|..-+...+ +.+....+++.|++.|+.||| ++.+||||||.+|||+- +...+|+||||..+....
T Consensus 103 ~aP~gdL~snv~~~G--igE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~-- 175 (378)
T KOG1345|consen 103 FAPRGDLRSNVEAAG--IGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT-- 175 (378)
T ss_pred cCccchhhhhcCccc--ccHHHHHHHHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeecccccccCc--
Confidence 999999998876654 778888999999999999999 99999999999999984 345899999999875421
Q ss_pred CccccccccccccccCccccCCC-----CCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhh
Q 001544 924 QSMTQTQTLATLGYMAPEYGREG-----RVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIID 998 (1057)
Q Consensus 924 ~~~~~~~~~~t~~y~aPE~~~~~-----~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1057)
.......+..|.|||..... ...+.+|+|.||+++|.++||+.||......+..+..|..-. .
T Consensus 176 ---tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~---------~ 243 (378)
T KOG1345|consen 176 ---TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWL---------K 243 (378)
T ss_pred ---eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHh---------c
Confidence 11122245579999965432 246789999999999999999999986443333333332211 1
Q ss_pred cccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHH
Q 001544 999 ANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVR 1042 (1057)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1042 (1057)
+.... ....-...++.+..+.++-+.++|++|=...++.+
T Consensus 244 rk~~~----~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk 283 (378)
T KOG1345|consen 244 RKNPA----LPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKK 283 (378)
T ss_pred ccCcc----CchhhcccCHHHHHHHHHhcCCcccccchhHHHHH
Confidence 11000 00111234566778889999999999944444433
No 415
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.91 E-value=6.8e-24 Score=215.89 Aligned_cols=170 Identities=22% Similarity=0.217 Sum_probs=130.2
Q ss_pred CChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccc
Q 001544 850 GSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQT 929 (1057)
Q Consensus 850 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 929 (1057)
|+|.+++...+..+++.+++.|+.|+++||+||| +.+ ||+||+++.++.+|+ ||.++.....
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~------- 62 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPE------- 62 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeeccc-------
Confidence 6899999876667999999999999999999999 665 999999999999999 9998865321
Q ss_pred cccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhh
Q 001544 930 QTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHF 1009 (1057)
Q Consensus 930 ~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1057)
...||+.|+|||++.+..++.++|||||||++|||++|+.||............+.... .......+
T Consensus 63 ~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~------------~~~~~~~~- 129 (176)
T smart00750 63 QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGM------------PADDPRDR- 129 (176)
T ss_pred cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHh------------ccCCcccc-
Confidence 12578999999999999999999999999999999999999865322221122111110 00000000
Q ss_pred HHHHHHHH--HHHHHHhHcccCCCCCCCCHHHHHHHHHHhHHH
Q 001544 1010 AAKEQCAS--SVFNLAMECTVESPDERITAKEIVRRLLKIRDF 1050 (1057)
Q Consensus 1010 ~~~~~~~~--~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 1050 (1057)
........ ++.+++.+||..+|++||++.|+++++..+...
T Consensus 130 ~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 130 SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 11122233 689999999999999999999999999887654
No 416
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.90 E-value=2.3e-24 Score=270.08 Aligned_cols=198 Identities=18% Similarity=0.243 Sum_probs=140.6
Q ss_pred hcCC-CCceeEeeee-------ccCCeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Q 001544 821 SIRH-RNLTKIISSC-------SNEDFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIH 892 (1057)
Q Consensus 821 ~l~h-~niv~l~~~~-------~~~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH 892 (1057)
.++| +||++++++| .+.+..+.++||+ +++|.+++......+++.+++.++.||++||+||| +++|+|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~gIvH 103 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAH---SQGIVV 103 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHH---hCCeee
Confidence 4445 5777788877 2234667889987 55999999876667999999999999999999999 999999
Q ss_pred ccCCCCCeeeCC-------------------CCcEEEEcccccccccCCCC--------------ccccccccccccccC
Q 001544 893 CDLKPSNVLLDD-------------------NMVAHLSDFGIAKLLIGEDQ--------------SMTQTQTLATLGYMA 939 (1057)
Q Consensus 893 ~Dlkp~Nill~~-------------------~~~~kl~Dfg~a~~~~~~~~--------------~~~~~~~~~t~~y~a 939 (1057)
|||||+|||++. ++.+|++|||+++....... ........||+.|||
T Consensus 104 rDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 183 (793)
T PLN00181 104 HNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTS 183 (793)
T ss_pred ccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEC
Confidence 999999999965 44556666666653211000 001112357888999
Q ss_pred ccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHH
Q 001544 940 PEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSV 1019 (1057)
Q Consensus 940 PE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1019 (1057)
||++.+..++.++|||||||++|||++|..|+..... ....+ . .... + +......++.
T Consensus 184 PE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~---~~~~~------------~-~~~~--~----~~~~~~~~~~ 241 (793)
T PLN00181 184 PEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR---TMSSL------------R-HRVL--P----PQILLNWPKE 241 (793)
T ss_pred hhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH---HHHHH------------H-Hhhc--C----hhhhhcCHHH
Confidence 9999999999999999999999999999887543100 00000 0 0000 0 0000112345
Q ss_pred HHHHhHcccCCCCCCCCHHHHHHHH
Q 001544 1020 FNLAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1020 ~~li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
.+++.+||+++|.+||++.|+++|-
T Consensus 242 ~~~~~~~L~~~P~~Rps~~eil~h~ 266 (793)
T PLN00181 242 ASFCLWLLHPEPSCRPSMSELLQSE 266 (793)
T ss_pred HHHHHHhCCCChhhCcChHHHhhch
Confidence 6788999999999999999998763
No 417
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.89 E-value=1e-22 Score=262.63 Aligned_cols=125 Identities=19% Similarity=0.273 Sum_probs=63.3
Q ss_pred cccceEEecCeeeeecCCccccCcccccccccCCccccccccccccccccccEEEeccccccCCCchhhccccccceecc
Q 001544 510 VELYKLALGDNKLSGQIPACFGNLASLRELWLGPNELISFIPSTFWNIKDIMYVNFSSNFLTGPLPLEIENLKALTTLDF 589 (1057)
Q Consensus 510 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 589 (1057)
++|+.|++++|...+.+|..++++++|+.|++++|...+..|... ++++|+.|++++|.....+|.. ..+|+.|+|
T Consensus 778 ~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~L 853 (1153)
T PLN03210 778 PSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNL 853 (1153)
T ss_pred ccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeEC
Confidence 345555555554444455555555555555555443222222222 3445555555554332223321 245566666
Q ss_pred ccccccccccccccCccccceeccccc-ccccccCccccccCccceecccCc
Q 001544 590 SMNNLSGVIPTTIGGLKGLQYLFLGHN-RLQGSIPDSVGDLISLKSLNLSNN 640 (1057)
Q Consensus 590 s~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~N 640 (1057)
++|.++ .+|..+..+++|+.|+|++| ++. .+|..+..+++|+.|++++|
T Consensus 854 s~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 854 SRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred CCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCC
Confidence 666665 45556666666666666653 343 45555566666666666655
No 418
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.88 E-value=1.5e-22 Score=223.76 Aligned_cols=166 Identities=20% Similarity=0.209 Sum_probs=130.3
Q ss_pred HHhCCCCCCceeccccCeEEEEEEec--CCcEEEEEEeecc-----chhHHHHHHHHHHHHHhcCCCCcee-EeeeeccC
Q 001544 766 QATNGFSENNLIGRGSFGSVYIARLQ--NGIEVAVKTFDLQ-----HERAFKSFDTECEVMKSIRHRNLTK-IISSCSNE 837 (1057)
Q Consensus 766 ~~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~-l~~~~~~~ 837 (1057)
....+|+..+.||+|+||+||+|... +++.||||++... .....+.+.+|++++++++|+|++. ++++
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----
Confidence 35678999999999999999999764 5788899987532 2234567999999999999999985 4432
Q ss_pred CeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccC-CCCCeeeCCCCcEEEEccccc
Q 001544 838 DFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDL-KPSNVLLDDNMVAHLSDFGIA 916 (1057)
Q Consensus 838 ~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl-kp~Nill~~~~~~kl~Dfg~a 916 (1057)
+..|+||||++|++|.. .... . ...++.|+++||+||| +++|+|||| ||+||+++.++.+||+|||+|
T Consensus 91 ~~~~LVmE~~~G~~L~~-~~~~----~---~~~~~~~i~~aL~~lH---~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA 159 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHL-ARPH----G---DPAWFRSAHRALRDLH---RAGITHNDLAKPQNWLMGPDGEAAVIDFQLA 159 (365)
T ss_pred CCcEEEEEccCCCCHHH-hCcc----c---hHHHHHHHHHHHHHHH---HCCCeeCCCCCcceEEEcCCCCEEEEECccc
Confidence 45799999999999973 2111 1 2467899999999999 999999999 999999999999999999999
Q ss_pred ccccCCCCccc------cccccccccccCccccCCC
Q 001544 917 KLLIGEDQSMT------QTQTLATLGYMAPEYGREG 946 (1057)
Q Consensus 917 ~~~~~~~~~~~------~~~~~~t~~y~aPE~~~~~ 946 (1057)
+.+........ .....+++.|+|||++...
T Consensus 160 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 160 SVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred eecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 97654332111 1344678889999987643
No 419
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.88 E-value=8.3e-22 Score=254.15 Aligned_cols=293 Identities=24% Similarity=0.316 Sum_probs=162.5
Q ss_pred CCCCcEEEccCCCCcCCccccccCcCCCcEEeeeccccccccCccccccccccEEEeecCccccccCccccccccccEEE
Q 001544 240 CKHLRILDLSFNDLWGDIPKEIGNLTKLKELFLDFNILQGEIPHTVGNLHNLEYLSLVNNELVGTVPATIFNVSTLKLIE 319 (1057)
Q Consensus 240 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 319 (1057)
..+|+.|+|++|++. .++..+..+++|+.|+|++|...+.+|. ++.+++|++|+|++|.....+|..+.++++|+.|+
T Consensus 610 ~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~ 687 (1153)
T PLN03210 610 PENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLD 687 (1153)
T ss_pred ccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEe
Confidence 466777777777765 4566666777777777776654445553 66677777777777765556777777777777777
Q ss_pred ecCCccccCCCCCcccCCCCCceEEecCccccccCCccccccccccccccccccccccccchhcccccccEEeccCcccC
Q 001544 320 LSNNTFFGSLPSSTDVQLPNLEELYLWGNNFSGTLPSFIFNASNLSKLSLGDNSFSGLIPNTFGNLRNLKRLRLYNNYLT 399 (1057)
Q Consensus 320 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 399 (1057)
+++|...+.+|... .+++|+.|++++|.....+|.. ..+|+.|++++|.+... |..+ .+++|++|++.++...
T Consensus 688 L~~c~~L~~Lp~~i--~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~~l-P~~~-~l~~L~~L~l~~~~~~ 760 (1153)
T PLN03210 688 MSRCENLEILPTGI--NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIEEF-PSNL-RLENLDELILCEMKSE 760 (1153)
T ss_pred CCCCCCcCccCCcC--CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccccc-cccc-cccccccccccccchh
Confidence 77765545666544 4667777777777554444432 34566677777766543 3333 4556666666543321
Q ss_pred CCccccccccCCCcchhhhhccCCCcccccccccccccccccEEEcCCCcccccccccccCccCCcEEEccCCcCCCCCC
Q 001544 400 SPELSFLSSLSNCKYLEIIALSGNPLNGIIPMSAGNLSHSLEELFMPDCNVSGRIPKEIGNLANLVTLDLGGNKFNGSIP 479 (1057)
Q Consensus 400 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p 479 (1057)
.... .+... +......+++|+.|++++|...+.+|.+++++++|+.|+|++|..-+.+|
T Consensus 761 ~l~~--------------------~~~~l-~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP 819 (1153)
T PLN03210 761 KLWE--------------------RVQPL-TPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLP 819 (1153)
T ss_pred hccc--------------------ccccc-chhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeC
Confidence 1100 00000 00111123456666666665555566666666666666666653333455
Q ss_pred cccccccccceeecccccCcccCCcccccccccceEEecCeeeeecCCccccCcccccccccCCcccccccccccccccc
Q 001544 480 IALGKLQKLQLLNLDDNKLEGSIPDDICGLVELYKLALGDNKLSGQIPACFGNLASLRELWLGPNELISFIPSTFWNIKD 559 (1057)
Q Consensus 480 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 559 (1057)
..+ ++++|+.|+|++|.....+|.. ..+|+.|+|++|.|+ .+|.++..+ ++
T Consensus 820 ~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l------------------------~~ 870 (1153)
T PLN03210 820 TGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKF------------------------SN 870 (1153)
T ss_pred CCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcC------------------------CC
Confidence 444 4556666666655433233322 134444555555544 334444444 44
Q ss_pred ccEEEeccc-cccCCCchhhccccccceeccccc
Q 001544 560 IMYVNFSSN-FLTGPLPLEIENLKALTTLDFSMN 592 (1057)
Q Consensus 560 L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~N 592 (1057)
|++|++++| +++. +|..+..++.|+.+++++|
T Consensus 871 L~~L~L~~C~~L~~-l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 871 LSFLDMNGCNNLQR-VSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred CCEEECCCCCCcCc-cCcccccccCCCeeecCCC
Confidence 445555542 3332 4444555666666666666
No 420
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.88 E-value=1.2e-23 Score=207.90 Aligned_cols=248 Identities=23% Similarity=0.346 Sum_probs=191.8
Q ss_pred CCceeccccCeEEEEEEecCCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCC
Q 001544 773 ENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNG 850 (1057)
Q Consensus 773 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~g 850 (1057)
...+|.+...|..|+|+++ |..+++|++.... .....+|.+|.-.++-..||||..++|.|....+..++..||+.|
T Consensus 194 l~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~g 272 (448)
T KOG0195|consen 194 LITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFG 272 (448)
T ss_pred hhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccch
Confidence 3456889999999999998 6778888875443 234468999999999999999999999999999999999999999
Q ss_pred ChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccc
Q 001544 851 SLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQT 929 (1057)
Q Consensus 851 sL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 929 (1057)
+|...++++. ...+..++.+++.++|+|++|||. .++-|.---+.+..|++|++.+++|+- +-+++ +.+..
T Consensus 273 slynvlhe~t~vvvd~sqav~faldiargmaflhs-lep~ipr~~lns~hvmidedltarism-ad~kf------sfqe~ 344 (448)
T KOG0195|consen 273 SLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHS-LEPMIPRFYLNSKHVMIDEDLTARISM-ADTKF------SFQEV 344 (448)
T ss_pred HHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhh-cchhhhhhhcccceEEecchhhhheec-cccee------eeecc
Confidence 9999999876 457888999999999999999993 233344446889999999999888752 11111 12223
Q ss_pred cccccccccCccccCCCCC---CccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccc
Q 001544 930 QTLATLGYMAPEYGREGRV---STKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITED 1006 (1057)
Q Consensus 930 ~~~~t~~y~aPE~~~~~~~---~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1057)
...-.+.||+||.+....- -.++|+|||++++||+.|...||.+...-+-.. ++. .++
T Consensus 345 gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgm-------------kia------leg 405 (448)
T KOG0195|consen 345 GRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGM-------------KIA------LEG 405 (448)
T ss_pred ccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhh-------------hhh------hcc
Confidence 3445688999998876543 357899999999999999999998743322111 111 112
Q ss_pred hhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhH
Q 001544 1007 KHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIR 1048 (1057)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~ 1048 (1057)
.+...++..++.+.+++.-|+..||.+||.+..++-.|+++.
T Consensus 406 lrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 406 LRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred ccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 233344556778899999999999999999999999998864
No 421
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=4e-22 Score=194.43 Aligned_cols=264 Identities=20% Similarity=0.210 Sum_probs=203.8
Q ss_pred HhCCCCCCceeccccCeEEEEEE-ecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCC-CCceeEeeeeccCCeeEEEE
Q 001544 767 ATNGFSENNLIGRGSFGSVYIAR-LQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRH-RNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lV~ 844 (1057)
....|..+++||+|+||.+|.|. ..+|..||||+-+..... .++..|.++.+.+++ ..|..+.-|..+.+.-.+||
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC--cchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 34679999999999999999996 678999999987544322 456678899999974 78888888999999999999
Q ss_pred EEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC---CCCcEEEEcccccccccC
Q 001544 845 EYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLIG 921 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~---~~~~~kl~Dfg~a~~~~~ 921 (1057)
|.+ |.+|++.+.-....++.++++-.+-|++.-++|+| .++++||||||+|+|.. ....+.++|||+|+.+..
T Consensus 91 dLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 91 DLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred ecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 988 77999998877778999999999999999999999 99999999999999996 345789999999988754
Q ss_pred CCC-----ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHh
Q 001544 922 EDQ-----SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKI 996 (1057)
Q Consensus 922 ~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1057)
... ........||.+|.+-....+.+.+.+.|+-|+|.++.++--|..||.+........ .-.++
T Consensus 167 ~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~Q----------KyEkI 236 (341)
T KOG1163|consen 167 IRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQ----------KYEKI 236 (341)
T ss_pred ccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHH----------HHHHH
Confidence 322 222334578999999888877888899999999999999999999998743221100 01111
Q ss_pred hhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHH
Q 001544 997 IDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRD 1049 (1057)
Q Consensus 997 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~ 1049 (1057)
.+.... .. .....+..|.++.-.+..|=..--++-|...-+-+.++-+.+
T Consensus 237 ~EkK~s-~~--ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr 286 (341)
T KOG1163|consen 237 SEKKMS-TP--IEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFR 286 (341)
T ss_pred HHhhcC-CC--HHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHh
Confidence 111111 00 112234567888889999988888888988777666655544
No 422
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=1.6e-21 Score=217.62 Aligned_cols=261 Identities=21% Similarity=0.237 Sum_probs=197.2
Q ss_pred CCCCCceeccccCeEEEEEEecCC--cEEEEEEeeccchhHHHHHHHHHHHHHhcCC----CCceeEeeee-ccCCeeEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQNG--IEVAVKTFDLQHERAFKSFDTECEVMKSIRH----RNLTKIISSC-SNEDFKAL 842 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~-~~~~~~~l 842 (1057)
+|.+.++||+|+||.||.|...+. ..+|+|............+..|+.++..+.. +++..+++.. ..++..++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 799999999999999999986643 5799998765433322367789999988863 6899999998 57888999
Q ss_pred EEEEccCCChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC-----CcEEEEccccc
Q 001544 843 ILEYMRNGSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN-----MVAHLSDFGIA 916 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~-----~~~kl~Dfg~a 916 (1057)
||+.+ |.+|.++..... ..++..++..|+.|++.+|.++| +.|++||||||.|+.+... ..+.+.|||++
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99977 779999775444 67999999999999999999999 9999999999999999854 46999999999
Q ss_pred c--cccCCCCc--c---c-cccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhc
Q 001544 917 K--LLIGEDQS--M---T-QTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDF 988 (1057)
Q Consensus 917 ~--~~~~~~~~--~---~-~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~ 988 (1057)
+ .+...... . . .....||..|+++....+...+.+.|+||++.++.|+..|..||........ ...
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-~~~----- 248 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-KSK----- 248 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-HHH-----
Confidence 8 33222211 1 1 2234599999999999999999999999999999999999999865332211 000
Q ss_pred cchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHHH
Q 001544 989 LPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRDF 1050 (1057)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 1050 (1057)
..+......... .....+.++.++...+-..+..++|....+...+++....
T Consensus 249 ----~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 249 ----FEKDPRKLLTDR------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred ----HHHHhhhhcccc------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 000000000000 1122345677777777779999999999999998776554
No 423
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.87 E-value=3.9e-22 Score=237.51 Aligned_cols=256 Identities=32% Similarity=0.386 Sum_probs=161.9
Q ss_pred EEeeecccCcccccccccCCCCCcEEeCCCCCccccCCcccccccccceeecccccccCCCCccccccCCCCeEeccCCC
Q 001544 75 ALNISYLSLTGNIPRQLGNLSSLEILDLNFNRLSGEIPWELGNLAKLEKLLLHNNFLTGTIPFSIFKLSSLLDLKLSDNN 154 (1057)
Q Consensus 75 ~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~ 154 (1057)
.|+++.++|+ .+|+.+. ++|+.|++++|+|+ .+|.. +++|++|+|++|+|+ .+|.. .++|++|+|++|.
T Consensus 205 ~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~N~ 273 (788)
T PRK15387 205 VLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSIFSNP 273 (788)
T ss_pred EEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc---ccccceeeccCCc
Confidence 4566666666 5666554 35666666666666 35532 356666666666666 34432 3456666666666
Q ss_pred CCCCCCcccccCCCCCceeEccCCcccccCchhhhccccCCeeEeeccCCccccCccccCCCCcccEEEeeccccccCcc
Q 001544 155 LTGTIPSHNLGNLSSLQLLDLSDNQLSGSIPSFIFKISSLQALHFGNNRLSGELPANICDNLPFLNFFSVYKNMFYGGIS 234 (1057)
Q Consensus 155 l~~~~p~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~l~~n~~~~~~~ 234 (1057)
++ .+|. ..++|+.|+|++|+++ .+|.. +++|+.|+|++|++++ +|.
T Consensus 274 L~-~Lp~----lp~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~-Lp~------------------------ 319 (788)
T PRK15387 274 LT-HLPA----LPSGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLAS-LPA------------------------ 319 (788)
T ss_pred hh-hhhh----chhhcCEEECcCCccc-ccccc---ccccceeECCCCcccc-CCC------------------------
Confidence 65 3443 1245666666666665 33431 3456666666666652 332
Q ss_pred ccccCCCCCcEEEccCCCCcCCccccccCcCCCcEEeeeccccccccCccccccccccEEEeecCccccccCcccccccc
Q 001544 235 STLSNCKHLRILDLSFNDLWGDIPKEIGNLTKLKELFLDFNILQGEIPHTVGNLHNLEYLSLVNNELVGTVPATIFNVST 314 (1057)
Q Consensus 235 ~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 314 (1057)
. ..+|+.|++++|.+++ +|.. ..+|++|+|++|+|++ +|.. .++|+.|++++|+|+ .+|.. .++
T Consensus 320 -l---p~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~-~LP~l---~~~ 383 (788)
T PRK15387 320 -L---PSELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PSG 383 (788)
T ss_pred -C---cccccccccccCcccc-cccc---ccccceEecCCCccCC-CCCC---Ccccceehhhccccc-cCccc---ccc
Confidence 1 1346667777777753 4431 2467778888887773 4442 246777788888877 35543 346
Q ss_pred ccEEEecCCccccCCCCCcccCCCCCceEEecCccccccCCccccccccccccccccccccccccchhcccccccEEecc
Q 001544 315 LKLIELSNNTFFGSLPSSTDVQLPNLEELYLWGNNFSGTLPSFIFNASNLSKLSLGDNSFSGLIPNTFGNLRNLKRLRLY 394 (1057)
Q Consensus 315 L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 394 (1057)
|+.|++++|.++ .+|.. .++|+.|++++|++++ +|.. ..+|+.|++++|+|+. +|..+.++++|+.|+|+
T Consensus 384 L~~LdLs~N~Lt-~LP~l----~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt~-LP~sl~~L~~L~~LdLs 453 (788)
T PRK15387 384 LKELIVSGNRLT-SLPVL----PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLTR-LPESLIHLSSETTVNLE 453 (788)
T ss_pred cceEEecCCccc-CCCCc----ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCcccc-cChHHhhccCCCeEECC
Confidence 788888888876 35532 3578888888888874 5653 3467888899999884 57788888899999999
Q ss_pred CcccCCC
Q 001544 395 NNYLTSP 401 (1057)
Q Consensus 395 ~N~l~~~ 401 (1057)
+|+++..
T Consensus 454 ~N~Ls~~ 460 (788)
T PRK15387 454 GNPLSER 460 (788)
T ss_pred CCCCCch
Confidence 9988763
No 424
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.87 E-value=2.6e-22 Score=239.04 Aligned_cols=261 Identities=27% Similarity=0.383 Sum_probs=131.7
Q ss_pred ccEEEecCCccccCCCCCcccCCCCCceEEecCccccccCCccccccccccccccccccccccccchhcccccccEEecc
Q 001544 315 LKLIELSNNTFFGSLPSSTDVQLPNLEELYLWGNNFSGTLPSFIFNASNLSKLSLGDNSFSGLIPNTFGNLRNLKRLRLY 394 (1057)
Q Consensus 315 L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 394 (1057)
-..|+|++|.++ .+|..+. ++|+.|++++|+++. +|.. +++|++|++++|+|+.+ |.. .++|+.|+++
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~---~~L~~L~L~~N~Lt~-LP~l---p~~Lk~LdLs~N~LtsL-P~l---p~sL~~L~Ls 270 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP---AHITTLVIPDNNLTS-LPAL---PPELRTLEVSGNQLTSL-PVL---PPGLLELSIF 270 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh---cCCCEEEccCCcCCC-CCCC---CCCCcEEEecCCccCcc-cCc---ccccceeecc
Confidence 456677777665 5665442 356666666666663 3432 34555555555555543 221 2345555555
Q ss_pred CcccCCCccccccccCCCcchhhhhccCCCcccccccccccccccccEEEcCCCcccccccccccCccCCcEEEccCCcC
Q 001544 395 NNYLTSPELSFLSSLSNCKYLEIIALSGNPLNGIIPMSAGNLSHSLEELFMPDCNVSGRIPKEIGNLANLVTLDLGGNKF 474 (1057)
Q Consensus 395 ~N~l~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~i 474 (1057)
+|.++.++. ++.+|+.|++++|+++. +|. .+++|+.|+|++|+|
T Consensus 271 ~N~L~~Lp~--------------------------------lp~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L 314 (788)
T PRK15387 271 SNPLTHLPA--------------------------------LPSGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQL 314 (788)
T ss_pred CCchhhhhh--------------------------------chhhcCEEECcCCcccc-ccc---cccccceeECCCCcc
Confidence 554443211 11234444444444442 222 124566666666666
Q ss_pred CCCCCcccccccccceeecccccCcccCCcccccccccceEEecCeeeeecCCccccCcccccccccCCccccccccccc
Q 001544 475 NGSIPIALGKLQKLQLLNLDDNKLEGSIPDDICGLVELYKLALGDNKLSGQIPACFGNLASLRELWLGPNELISFIPSTF 554 (1057)
Q Consensus 475 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 554 (1057)
++ +|... .+|+.|++++|+|++ +|.. ..+|+.|+|++|+|++ +|... .+|+.|++++|+|..+
T Consensus 315 ~~-Lp~lp---~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~lp---~~L~~L~Ls~N~L~~L----- 377 (788)
T PRK15387 315 AS-LPALP---SELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTLP---SELYKLWAYNNRLTSL----- 377 (788)
T ss_pred cc-CCCCc---ccccccccccCcccc-cccc---ccccceEecCCCccCC-CCCCC---cccceehhhccccccC-----
Confidence 53 33321 235555566666553 3321 1245555555555553 23211 2344444444444432
Q ss_pred cccccccEEEeccccccCCCchhhccccccceeccccccccccccccccCccccceecccccccccccCccccccCccce
Q 001544 555 WNIKDIMYVNFSSNFLTGPLPLEIENLKALTTLDFSMNNLSGVIPTTIGGLKGLQYLFLGHNRLQGSIPDSVGDLISLKS 634 (1057)
Q Consensus 555 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 634 (1057)
|.. ..+|+.|+|++|+|++ +|.. .++|+.|++++|+|+ .+|..+ .+|+.
T Consensus 378 --------------------P~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Ls-sIP~l~---~~L~~ 426 (788)
T PRK15387 378 --------------------PAL---PSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLT-SLPMLP---SGLLS 426 (788)
T ss_pred --------------------ccc---ccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCC-CCCcch---hhhhh
Confidence 221 1345556666666653 3322 245666666666666 345432 34566
Q ss_pred ecccCccccCCCcccccCcccccccccCCCcccCcCCC
Q 001544 635 LNLSNNNLSGPIPTSLEKLSDLKELNLSFNKLEGEIPR 672 (1057)
Q Consensus 635 L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~ 672 (1057)
|+|++|+|+ .+|..+.++++|+.|+|++|+|+|.+|.
T Consensus 427 L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 427 LSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred hhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHH
Confidence 666666666 5666666666666666666666666553
No 425
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=5.4e-21 Score=195.12 Aligned_cols=262 Identities=18% Similarity=0.195 Sum_probs=202.5
Q ss_pred CCCCCCceeccccCeEEEEEE-ecCCcEEEEEEeeccchhHHHHHHHHHHHHHhc-CCCCceeEeeeeccCCeeEEEEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIAR-LQNGIEVAVKTFDLQHERAFKSFDTECEVMKSI-RHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
-.|.+.++||+|+||+.+.|+ +-++++||||.-.... ...++..|.+..+.+ ..++|..++-|..++.+-.+|+|.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL 105 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL 105 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence 468889999999999999997 4578999999653222 235667788888888 479999999888889999999998
Q ss_pred ccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC-----CcEEEEcccccccccC
Q 001544 847 MRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN-----MVAHLSDFGIAKLLIG 921 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~-----~~~kl~Dfg~a~~~~~ 921 (1057)
+ |.+|+|++.-.+..++.+++..||.|++.-++|+| ++..|.|||||+|+||... ..+.++|||+|+.+..
T Consensus 106 L-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD 181 (449)
T KOG1165|consen 106 L-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD 181 (449)
T ss_pred h-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence 8 77999999888888999999999999999999999 9999999999999999743 4689999999998754
Q ss_pred CCC-----ccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHh
Q 001544 922 EDQ-----SMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKI 996 (1057)
Q Consensus 922 ~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1057)
... +.......||.+||+-....+.+.+.+.|.-|+|-++++.+-|..||........-. . -.++
T Consensus 182 p~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~-k---------YeKI 251 (449)
T KOG1165|consen 182 PKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKE-K---------YEKI 251 (449)
T ss_pred ccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHH-H---------HHHh
Confidence 432 223334569999999999999999999999999999999999999998754332111 0 1111
Q ss_pred hhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHH
Q 001544 997 IDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRD 1049 (1057)
Q Consensus 997 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~ 1049 (1057)
-+... ........+.+|.++..-+...=..+-++-|...-+..-+..+.+
T Consensus 252 Ge~Kr---~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvld 301 (449)
T KOG1165|consen 252 GETKR---STPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLD 301 (449)
T ss_pred ccccc---cCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 11111 011112234567777777777777788888888776666655544
No 426
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=9.4e-21 Score=227.70 Aligned_cols=246 Identities=26% Similarity=0.394 Sum_probs=124.1
Q ss_pred ccceeecccccccCCCCccccccCCCCeEeccCCCCCCCCCcccccCCCCCceeEccCCcccccCchhhhccccCCeeEe
Q 001544 120 KLEKLLLHNNFLTGTIPFSIFKLSSLLDLKLSDNNLTGTIPSHNLGNLSSLQLLDLSDNQLSGSIPSFIFKISSLQALHF 199 (1057)
Q Consensus 120 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 199 (1057)
+.+.|++++++++ .+|..+. ++|+.|+|++|+++ .+|.. + .++|++|++++|+++ .+|..+. .+|+.|+|
T Consensus 179 ~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~-l--~~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 179 NKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPEN-L--QGNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred CceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChh-h--ccCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 3455555555555 3454432 35556666666555 34432 1 135566666666655 3444332 24566666
Q ss_pred eccCCccccCccccCCCCcccEEEeeccccccCccccccCCCCCcEEEccCCCCcCCccccccCcCCCcEEeeecccccc
Q 001544 200 GNNRLSGELPANICDNLPFLNFFSVYKNMFYGGISSTLSNCKHLRILDLSFNDLWGDIPKEIGNLTKLKELFLDFNILQG 279 (1057)
Q Consensus 200 ~~N~l~~~~p~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 279 (1057)
++|+++ .+|..+. ++|+.|++++|.+.. +|..+. ++|+.|++++|++++ +|..+. ++|+.|++++|.++.
T Consensus 249 s~N~L~-~LP~~l~---s~L~~L~Ls~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~ 318 (754)
T PRK15370 249 SINRIT-ELPERLP---SALQSLDLFHNKISC-LPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA 318 (754)
T ss_pred cCCccC-cCChhHh---CCCCEEECcCCccCc-cccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc
Confidence 666655 4444332 123333333333332 122221 356666666666653 343332 356666666666663
Q ss_pred ccCccccccccccEEEeecCccccccCccccccccccEEEecCCccccCCCCCcccCCCCCceEEecCccccccCCcccc
Q 001544 280 EIPHTVGNLHNLEYLSLVNNELVGTVPATIFNVSTLKLIELSNNTFFGSLPSSTDVQLPNLEELYLWGNNFSGTLPSFIF 359 (1057)
Q Consensus 280 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 359 (1057)
+|..+. ++|++|++++|.+++ +|..+. ++|+.|++++|+++ .+|... .++|+.|+|++|+++ .+|..+.
T Consensus 319 -LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~l---p~~L~~LdLs~N~Lt-~LP~~l~ 387 (754)
T PRK15370 319 -LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETL---PPTITTLDVSRNALT-NLPENLP 387 (754)
T ss_pred -CCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhh---cCCcCEEECCCCcCC-CCCHhHH
Confidence 343332 456666666666653 444332 45666666666664 344432 245666666666666 3444332
Q ss_pred ccccccccccccccccccccch----hcccccccEEeccCcccC
Q 001544 360 NASNLSKLSLGDNSFSGLIPNT----FGNLRNLKRLRLYNNYLT 399 (1057)
Q Consensus 360 ~l~~L~~L~L~~N~l~~~~~~~----~~~l~~L~~L~L~~N~l~ 399 (1057)
..|+.|++++|+++.+ |.. +..++++..|++.+|+++
T Consensus 388 --~sL~~LdLs~N~L~~L-P~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 388 --AALQIMQASRNNLVRL-PESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred --HHHHHHhhccCCcccC-chhHHHHhhcCCCccEEEeeCCCcc
Confidence 2466666666666532 322 233355555555555554
No 427
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=8.5e-22 Score=232.59 Aligned_cols=253 Identities=21% Similarity=0.236 Sum_probs=192.8
Q ss_pred CCceeccccCeEEEEEEec-CCcEEEEEEee-----ccchhH-HHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 773 ENNLIGRGSFGSVYIARLQ-NGIEVAVKTFD-----LQHERA-FKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 773 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~-----~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
..+++|.|++|.|+.+... .....+.|.++ ...... ...+..|+-+-..++|||++..+..+.+.+..+-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 4578999999988877533 34445555443 111111 2226678888888999999988888877776666799
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
|+++ +|...+.... .+...++-.++.|+..|++|+| +.||.|||+|++|+++..+|.+||+|||.+.........
T Consensus 402 ~~~~-Dlf~~~~~~~-~~~~~e~~c~fKqL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~ 476 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSNG-KLTPLEADCFFKQLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEK 476 (601)
T ss_pred cccH-HHHHHHhccc-ccchhhhhHHHHHHHHHHHHHH---hcCceeccCccccEEEecCCceEEeecCcceeeccCcch
Confidence 9999 9999887653 4788889999999999999999 999999999999999999999999999999876544443
Q ss_pred --cccccccccccccCccccCCCCCCc-cchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccc
Q 001544 926 --MTQTQTLATLGYMAPEYGREGRVST-KGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLL 1002 (1057)
Q Consensus 926 --~~~~~~~~t~~y~aPE~~~~~~~~~-~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1057)
.......|+..|+|||++.+..|.+ ..||||.|++++.|.+|+.||......+..+. ........
T Consensus 477 ~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~------------~~~~~~~~ 544 (601)
T KOG0590|consen 477 NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFK------------TNNYSDQR 544 (601)
T ss_pred hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchh------------hhcccccc
Confidence 5556678899999999999988865 57999999999999999999976544433210 00000001
Q ss_pred cccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHH
Q 001544 1003 ITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVR 1042 (1057)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1042 (1057)
.............+.+...++.+|++.+|.+|.|+.+|++
T Consensus 545 ~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 545 NIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred ccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 1112233344567888899999999999999999999975
No 428
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.83 E-value=1.3e-19 Score=205.30 Aligned_cols=258 Identities=31% Similarity=0.423 Sum_probs=197.8
Q ss_pred CCCCceeccccCeEEEEEEecCCcEEEEEEeeccchh---HHHHHHHHHHHHHhcCCC-CceeEeeeeccCCeeEEEEEE
Q 001544 771 FSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHER---AFKSFDTECEVMKSIRHR-NLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lV~E~ 846 (1057)
|...+.||.|+||.||++... ..+|+|.+...... ....+.+|+.+++.+.|+ +++++.+++......++++||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 567789999999999999877 88999998654332 467899999999999988 799999999777778999999
Q ss_pred ccCCChhHHHhcCC--ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC-cEEEEcccccccccCCC
Q 001544 847 MRNGSLEKCLYSGN--YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM-VAHLSDFGIAKLLIGED 923 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfg~a~~~~~~~ 923 (1057)
+.++++.+++.... ..+.......++.|++.++.|+| +.+++|||+||+||+++..+ .++++|||.++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 99999997776554 26889999999999999999999 89999999999999999988 79999999998654333
Q ss_pred Ccc----ccccccccccccCccccCC---CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHh
Q 001544 924 QSM----TQTQTLATLGYMAPEYGRE---GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKI 996 (1057)
Q Consensus 924 ~~~----~~~~~~~t~~y~aPE~~~~---~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1057)
... ......++..|+|||...+ .......|+|++|++++++++|..||......... ....+.
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~----------~~~~~~ 226 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSAT----------SQTLKI 226 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccH----------HHHHHH
Confidence 221 3456689999999999887 57889999999999999999999996553221000 001111
Q ss_pred hhccccc--ccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 997 IDANLLI--TEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 997 ~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
+...... ...............+.+++..|+..+|..|.++.+...+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 227 ILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred HHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 1110000 0000000002223567899999999999999999887765
No 429
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.83 E-value=8.7e-21 Score=228.00 Aligned_cols=283 Identities=24% Similarity=0.371 Sum_probs=199.4
Q ss_pred CCCCeEeccCCCCCCCCCcccccCCCCCceeEccCCcccccCchhhhccccCCeeEeeccCCccccCccccCCCCcccEE
Q 001544 143 SSLLDLKLSDNNLTGTIPSHNLGNLSSLQLLDLSDNQLSGSIPSFIFKISSLQALHFGNNRLSGELPANICDNLPFLNFF 222 (1057)
Q Consensus 143 ~~L~~L~Ls~n~l~~~~p~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L 222 (1057)
.+...|+++++.++ .+|.. + .++|+.|+|++|+++ .+|..+. ++|+.|++++|+++ .+|..+.
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~-I--p~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--------- 240 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPAC-I--PEQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--------- 240 (754)
T ss_pred cCceEEEeCCCCcC-cCCcc-c--ccCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh---------
Confidence 46789999999998 67753 3 368999999999999 5677664 58999999999998 5665321
Q ss_pred EeeccccccCccccccCCCCCcEEEccCCCCcCCccccccCcCCCcEEeeeccccccccCccccccccccEEEeecCccc
Q 001544 223 SVYKNMFYGGISSTLSNCKHLRILDLSFNDLWGDIPKEIGNLTKLKELFLDFNILQGEIPHTVGNLHNLEYLSLVNNELV 302 (1057)
Q Consensus 223 ~l~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 302 (1057)
.+|+.|+|++|.+. .+|..+. ++|+.|++++|+++ .+|..+. ++|++|+|++|+++
T Consensus 241 ------------------~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt 296 (754)
T PRK15370 241 ------------------DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR 296 (754)
T ss_pred ------------------ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc
Confidence 35777888888876 5666554 47888888888887 4666554 47888888888887
Q ss_pred cccCccccccccccEEEecCCccccCCCCCcccCCCCCceEEecCccccccCCccccccccccccccccccccccccchh
Q 001544 303 GTVPATIFNVSTLKLIELSNNTFFGSLPSSTDVQLPNLEELYLWGNNFSGTLPSFIFNASNLSKLSLGDNSFSGLIPNTF 382 (1057)
Q Consensus 303 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 382 (1057)
.+|..+. ++|+.|++++|.++ .+|... .++|+.|++++|.+++ +|..+. ++|+.|++++|+|+. +|..+
T Consensus 297 -~LP~~lp--~sL~~L~Ls~N~Lt-~LP~~l---~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~~-LP~~l 365 (754)
T PRK15370 297 -TLPAHLP--SGITHLNVQSNSLT-ALPETL---PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQITV-LPETL 365 (754)
T ss_pred -cCcccch--hhHHHHHhcCCccc-cCCccc---cccceeccccCCcccc-CChhhc--CcccEEECCCCCCCc-CChhh
Confidence 3554432 46888888888887 455443 3678889999998884 666553 689999999999885 45554
Q ss_pred cccccccEEeccCcccCCCccccccccCCCcchhhhhccCCCcccccccccccccccccEEEcCCCcccccccccccCcc
Q 001544 383 GNLRNLKRLRLYNNYLTSPELSFLSSLSNCKYLEIIALSGNPLNGIIPMSAGNLSHSLEELFMPDCNVSGRIPKEIGNLA 462 (1057)
Q Consensus 383 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~l~~n~~~~~~p~~~~~l~ 462 (1057)
.++|++|+|++|.++.++.... +.|+.|++++|++.+. |. .+|..+..++
T Consensus 366 --p~~L~~LdLs~N~Lt~LP~~l~------~sL~~LdLs~N~L~~L-P~---------------------sl~~~~~~~~ 415 (754)
T PRK15370 366 --PPTITTLDVSRNALTNLPENLP------AALQIMQASRNNLVRL-PE---------------------SLPHFRGEGP 415 (754)
T ss_pred --cCCcCEEECCCCcCCCCCHhHH------HHHHHHhhccCCcccC-ch---------------------hHHHHhhcCC
Confidence 3689999999999987654332 3688899999988732 32 2333445567
Q ss_pred CCcEEEccCCcCCCCCCcccccccccceeecccccCcc-cCCcccccccccce
Q 001544 463 NLVTLDLGGNKFNGSIPIALGKLQKLQLLNLDDNKLEG-SIPDDICGLVELYK 514 (1057)
Q Consensus 463 ~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~ 514 (1057)
.+..|+|.+|.|+. ..+.+|+.| ++.+.+.| .++...+.+.+++.
T Consensus 416 ~l~~L~L~~Npls~------~tl~~L~~L-l~s~~~~gp~i~~~~~~~~~l~~ 461 (754)
T PRK15370 416 QPTRIIVEYNPFSE------RTIQNMQRL-MSSVGYQGPRVLFAMGDFSIVRV 461 (754)
T ss_pred CccEEEeeCCCccH------HHHHHHHHh-hhcccccCCcccccccccccccc
Confidence 88899999998872 345566666 44454433 33444444444443
No 430
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.82 E-value=2.1e-20 Score=191.62 Aligned_cols=171 Identities=13% Similarity=0.164 Sum_probs=132.4
Q ss_pred HhCCCCCCceeccccCeEEEEEEecCCcEEEEEEeeccchhH---HHH------HHHHHHHHHhcCCCCceeEeeeeccC
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERA---FKS------FDTECEVMKSIRHRNLTKIISSCSNE 837 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~------~~~E~~~l~~l~h~niv~l~~~~~~~ 837 (1057)
..++|+..+++|.|+||.||.+.. ++..+|||+++...... ... +++|++.+.+++||+|..+..++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 467899999999999999999766 47789999996543222 222 68999999999999999998886532
Q ss_pred --------CeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEE
Q 001544 838 --------DFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAH 909 (1057)
Q Consensus 838 --------~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 909 (1057)
...++||||++|.+|.++.. .+. ....+++.++..+| ..+++|||+||+||+++.+| ++
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH---~~gi~H~Dikp~Nili~~~g-i~ 174 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLH---QHGMVSGDPHKGNFIVSKNG-LR 174 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHH---HcCCccCCCChHHEEEeCCC-EE
Confidence 35789999999999988632 222 34669999999999 99999999999999999988 99
Q ss_pred EEcccccccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHh
Q 001544 910 LSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETF 965 (1057)
Q Consensus 910 l~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ell 965 (1057)
++|||......... .. ..+.....+..++|+|++|+.+....
T Consensus 175 liDfg~~~~~~e~~---a~-----------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 175 IIDLSGKRCTAQRK---AK-----------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEECCCcccccchh---hH-----------HHHHHHhHhcccccccceeEeehHHH
Confidence 99999886541110 00 01333445667899999999876554
No 431
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.81 E-value=7.7e-20 Score=186.35 Aligned_cols=139 Identities=17% Similarity=0.179 Sum_probs=108.9
Q ss_pred CceeccccCeEEEEEEecCCcEEEEEEeeccchh--H------------------------HHHHHHHHHHHHhcCCCCc
Q 001544 774 NNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHER--A------------------------FKSFDTECEVMKSIRHRNL 827 (1057)
Q Consensus 774 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~------------------------~~~~~~E~~~l~~l~h~ni 827 (1057)
...||+|+||.||+|...+|+.||||+++..... . ......|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3679999999999999888999999999654211 0 1123459999999988776
Q ss_pred eeEeeeeccCCeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHH-HhCCCCCeEEccCCCCCeeeCCCC
Q 001544 828 TKIISSCSNEDFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYL-HFGYSAPVIHCDLKPSNVLLDDNM 906 (1057)
Q Consensus 828 v~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~~~ivH~Dlkp~Nill~~~~ 906 (1057)
.....+.. ...++||||++++++...... ...++..+...++.|++.+++|+ | +.+|+||||||+||+++ ++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~l~H---~~giiHrDlkP~NIli~-~~ 154 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLK-DAPLSESKARELYLQVIQIMRILYQ---DCRLVHADLSEYNLLYH-DG 154 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhh-cCCCCHHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEE-CC
Confidence 44333222 223899999999877654332 23588999999999999999999 7 88999999999999998 57
Q ss_pred cEEEEcccccccc
Q 001544 907 VAHLSDFGIAKLL 919 (1057)
Q Consensus 907 ~~kl~Dfg~a~~~ 919 (1057)
.++++|||+|...
T Consensus 155 ~v~LiDFG~a~~~ 167 (190)
T cd05147 155 KLYIIDVSQSVEH 167 (190)
T ss_pred cEEEEEccccccC
Confidence 8999999999754
No 432
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.80 E-value=1.6e-20 Score=218.54 Aligned_cols=248 Identities=21% Similarity=0.235 Sum_probs=179.4
Q ss_pred CCCCCceeccccCeEEEEEEecCCcEEEEEEeeccc-hhHH---HHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 770 GFSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQH-ERAF---KSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 770 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~---~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
+|...+.+|++.|=+|.+|+.+.|. |+||++-+.. .-.. .+..+|++ ...++|||++.+.-.-..++..|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5677789999999999999998887 9999995544 2223 33334444 556689999999888777888899999
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccc-cCCCC
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL-IGEDQ 924 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~-~~~~~ 924 (1057)
|+.. +|.|.+..+. .+...+.+.|+.|++.|+..+| ..||+|||||.+|||++.-..+.++||..-+.. -+.+.
T Consensus 102 yvkh-nLyDRlSTRP-FL~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN 176 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTRP-FLVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN 176 (1431)
T ss_pred HHhh-hhhhhhccch-HHHHHHHHHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhhcccccCCccCCCCC
Confidence 9966 8988886544 5777788899999999999999 999999999999999999999999999764321 12222
Q ss_pred cccccc----ccccccccCccccCCC-----------CCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhh-
Q 001544 925 SMTQTQ----TLATLGYMAPEYGREG-----------RVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVND- 987 (1057)
Q Consensus 925 ~~~~~~----~~~t~~y~aPE~~~~~-----------~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~- 987 (1057)
....+. ...-..|.|||-+... ..+++.||||.||+++|+++ |++||... .+-.|...
T Consensus 177 Padf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-----QL~aYr~~~ 251 (1431)
T KOG1240|consen 177 PADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-----QLLAYRSGN 251 (1431)
T ss_pred cccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH-----HHHhHhccC
Confidence 222221 2233479999965321 14678999999999999988 68877641 00000000
Q ss_pred -ccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHH
Q 001544 988 -FLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLK 1046 (1057)
Q Consensus 988 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1046 (1057)
..++...+. --...+++++..|++.||++|.+|.+.++.-+.
T Consensus 252 ~~~~e~~Le~-----------------Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 252 ADDPEQLLEK-----------------IEDVSLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred ccCHHHHHHh-----------------CcCccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 000011110 012357889999999999999999999987544
No 433
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.79 E-value=8.7e-19 Score=179.69 Aligned_cols=138 Identities=22% Similarity=0.237 Sum_probs=110.8
Q ss_pred CceeccccCeEEEEEEecCCcEEEEEEeeccchh--------------------------HHHHHHHHHHHHHhcCCCCc
Q 001544 774 NNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHER--------------------------AFKSFDTECEVMKSIRHRNL 827 (1057)
Q Consensus 774 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~E~~~l~~l~h~ni 827 (1057)
...||+|++|.||+|...+|+.||||+++..... ....+.+|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999998778999999998654210 01234678999999999987
Q ss_pred eeEeeeeccCCeeEEEEEEccCCChhHH-HhcCCccCCHHHHHHHHHHHHHHHHHHHhCCC-CCeEEccCCCCCeeeCCC
Q 001544 828 TKIISSCSNEDFKALILEYMRNGSLEKC-LYSGNYILDIFQRLNIMIDVASALEYLHFGYS-APVIHCDLKPSNVLLDDN 905 (1057)
Q Consensus 828 v~l~~~~~~~~~~~lV~E~~~~gsL~~~-l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~Dlkp~Nill~~~ 905 (1057)
.....+... ..++||||++++++... +.. ..++..+..+++.|++.++.++| + .+|+||||||+||+++ +
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH---~~~givHrDlkP~NIll~-~ 153 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLY---QEAGLVHGDLSEYNILYH-D 153 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCChhhEEEE-C
Confidence 544443332 24899999998865433 332 34778889999999999999999 7 9999999999999999 8
Q ss_pred CcEEEEcccccccc
Q 001544 906 MVAHLSDFGIAKLL 919 (1057)
Q Consensus 906 ~~~kl~Dfg~a~~~ 919 (1057)
+.++++|||+++.+
T Consensus 154 ~~~~liDFG~a~~~ 167 (190)
T cd05145 154 GKPYIIDVSQAVEL 167 (190)
T ss_pred CCEEEEEcccceec
Confidence 99999999999865
No 434
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.79 E-value=1e-18 Score=174.71 Aligned_cols=186 Identities=18% Similarity=0.167 Sum_probs=139.1
Q ss_pred CCCceeccccCeEEEEEEecCCcEEEEEEeeccch----hHHHHHHHHHHHHHhcC-CCCceeEeeeeccCCeeEEEEEE
Q 001544 772 SENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHE----RAFKSFDTECEVMKSIR-HRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 772 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
.....|++|+||+||.+.. .+.+++.+.+..... .....+.+|+++|+++. |+++++++++ +..++||||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3467899999999998766 578888887754432 22346889999999995 5889999886 346899999
Q ss_pred ccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccC-CCCCeeeCCCCcEEEEcccccccccCCCCc
Q 001544 847 MRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDL-KPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 925 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl-kp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 925 (1057)
++|.+|.+.... ....++.|++++++++| ..||+|||| ||.||+++.++.++|+|||+|.........
T Consensus 80 I~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~ 148 (218)
T PRK12274 80 LAGAAMYQRPPR--------GDLAYFRAARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARW 148 (218)
T ss_pred ecCccHHhhhhh--------hhHHHHHHHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchH
Confidence 999998764321 12457889999999999 999999999 799999999999999999999864322210
Q ss_pred c---c--------cccccccccccCccccCCC-CCC-ccchHHHHHHHHHHHhhCCCCCCc
Q 001544 926 M---T--------QTQTLATLGYMAPEYGREG-RVS-TKGDVYSFGILLMETFTRRKPTDE 973 (1057)
Q Consensus 926 ~---~--------~~~~~~t~~y~aPE~~~~~-~~~-~~~Dv~s~G~il~elltg~~p~~~ 973 (1057)
. . ......++.|++|+...-- ..+ ...+-++-|+-+|.++|++.|+..
T Consensus 149 ~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 149 MRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 0 0 0112356677777643221 222 456888999999999999988644
No 435
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.79 E-value=6.4e-19 Score=186.12 Aligned_cols=229 Identities=21% Similarity=0.288 Sum_probs=146.4
Q ss_pred CCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCC----------CCceeEeee----
Q 001544 772 SENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRH----------RNLTKIISS---- 833 (1057)
Q Consensus 772 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h----------~niv~l~~~---- 833 (1057)
...+.||.|+++.||.+++. +|+++|||++.... ...++.+++|.-....+.+ -.++.-++.
T Consensus 15 ~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~ 94 (288)
T PF14531_consen 15 VRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIP 94 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEET
T ss_pred EEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEc
Confidence 44688999999999999876 58999999984332 2346677777655544322 111111111
Q ss_pred -----eccC---C-----eeEEEEEEccCCChhHHHh---cCC---ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcc
Q 001544 834 -----CSNE---D-----FKALILEYMRNGSLEKCLY---SGN---YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCD 894 (1057)
Q Consensus 834 -----~~~~---~-----~~~lV~E~~~~gsL~~~l~---~~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 894 (1057)
+... . ..+++|+-+. ++|.+++. ... .......+..+..|+++.+++|| ..|+||+|
T Consensus 95 ~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh---~~GlVHgd 170 (288)
T PF14531_consen 95 GKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLH---SYGLVHGD 170 (288)
T ss_dssp TS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEEEST
T ss_pred CCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHh---hcceEecc
Confidence 1111 1 2357888774 48877643 222 22445556778899999999999 99999999
Q ss_pred CCCCCeeeCCCCcEEEEcccccccccCCCCccccccccccccccCccccCC--------CCCCccchHHHHHHHHHHHhh
Q 001544 895 LKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGRE--------GRVSTKGDVYSFGILLMETFT 966 (1057)
Q Consensus 895 lkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--------~~~~~~~Dv~s~G~il~ellt 966 (1057)
|+|+|++++++|.++++||+...... . .......+..|.|||.... ..++++.|.|++|+++|.+++
T Consensus 171 i~~~nfll~~~G~v~Lg~F~~~~r~g---~--~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC 245 (288)
T PF14531_consen 171 IKPENFLLDQDGGVFLGDFSSLVRAG---T--RYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWC 245 (288)
T ss_dssp -SGGGEEE-TTS-EEE--GGGEEETT---E--EEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHH
T ss_pred cceeeEEEcCCCCEEEcChHHHeecC---c--eeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHH
Confidence 99999999999999999999887541 1 1111345578999996533 247889999999999999999
Q ss_pred CCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCC
Q 001544 967 RRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDER 1034 (1057)
Q Consensus 967 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 1034 (1057)
|+.||+........ .| .+....++++.+.++|..+++++|++|
T Consensus 246 ~~lPf~~~~~~~~~--~~-----------------------~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 246 GRLPFGLSSPEADP--EW-----------------------DFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp SS-STCCCGGGSTS--GG-----------------------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred ccCCCCCCCccccc--cc-----------------------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence 99999864222111 11 111122567889999999999999988
No 436
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.78 E-value=9.3e-19 Score=196.43 Aligned_cols=218 Identities=29% Similarity=0.428 Sum_probs=164.1
Q ss_pred HHhcCCCCceeEeeeeccCCeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCe-EEccCCC
Q 001544 819 MKSIRHRNLTKIISSCSNEDFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPV-IHCDLKP 897 (1057)
Q Consensus 819 l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i-vH~Dlkp 897 (1057)
|+.+.|.|+.+++|.+.++...+.|.+|+..|+|.+.+......+++.....+.++|+.|++|+| ..+| +|+.+++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh---~s~i~~hg~l~s 77 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLH---NSPIGYHGALKS 77 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHh---cCcceeeeeecc
Confidence 35688999999999999999999999999999999999987878999999999999999999999 5554 8999999
Q ss_pred CCeeeCCCCcEEEEcccccccccCCCCccccccccccccccCccccCCCC-------CCccchHHHHHHHHHHHhhCCCC
Q 001544 898 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGR-------VSTKGDVYSFGILLMETFTRRKP 970 (1057)
Q Consensus 898 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-------~~~~~Dv~s~G~il~elltg~~p 970 (1057)
.|.++|..+.+|++|||+.................-..-|.|||.+.... .+.+.||||||++++|+++.+.|
T Consensus 78 ~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~ 157 (484)
T KOG1023|consen 78 SNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP 157 (484)
T ss_pred ccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence 99999999999999999987653211112222223445699999887631 46789999999999999999999
Q ss_pred CCcccccccchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHH
Q 001544 971 TDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRD 1049 (1057)
Q Consensus 971 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~ 1049 (1057)
|+.....+.. .+.+. .+.+ .......+......+.++++..++.+||..+|++||++..+-..++.+..
T Consensus 158 ~~~~~~~~~~-~eii~--------~~~~-~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 158 FDLRNLVEDP-DEIIL--------RVKK-GGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred cccccccCCh-HHHHH--------HHHh-cCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 9874333221 11111 1111 00000001111111455678999999999999999999999888876643
No 437
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.76 E-value=9.9e-19 Score=182.45 Aligned_cols=197 Identities=23% Similarity=0.301 Sum_probs=142.6
Q ss_pred CCCCceeEeeeecc---------------------------CCeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHH
Q 001544 823 RHRNLTKIISSCSN---------------------------EDFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDV 875 (1057)
Q Consensus 823 ~h~niv~l~~~~~~---------------------------~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i 875 (1057)
+|||||++.++|.+ ....|+||...+. +|.+++.... .+...+.-|..|+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~--~s~r~~~~~laQl 350 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH--RSYRTGRVILAQL 350 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC--CchHHHHHHHHHH
Confidence 59999999887633 2367899988865 8998887654 5666778899999
Q ss_pred HHHHHHHHhCCCCCeEEccCCCCCeeeC--CCC--cEEEEcccccccccCCC----CccccccccccccccCccccCCCC
Q 001544 876 ASALEYLHFGYSAPVIHCDLKPSNVLLD--DNM--VAHLSDFGIAKLLIGED----QSMTQTQTLATLGYMAPEYGREGR 947 (1057)
Q Consensus 876 ~~~L~~LH~~~~~~ivH~Dlkp~Nill~--~~~--~~kl~Dfg~a~~~~~~~----~~~~~~~~~~t~~y~aPE~~~~~~ 947 (1057)
++|+.||| .+||.|||+|++|||+. +|+ .+.|+|||.+---...+ .........|...-||||+.....
T Consensus 351 LEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~P 427 (598)
T KOG4158|consen 351 LEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVP 427 (598)
T ss_pred HHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCC
Confidence 99999999 99999999999999984 444 57899999874321111 111222334666789999875432
Q ss_pred ------CCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHH
Q 001544 948 ------VSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFN 1021 (1057)
Q Consensus 948 ------~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1021 (1057)
...|+|.|+.|.+.||+++..-||.. .++..+..-. ..+..-.+.+..+++.+.+
T Consensus 428 Gp~avvny~kAD~WA~GalaYEIfg~~NPFY~--rGem~L~~r~-----------------Yqe~qLPalp~~vpp~~rq 488 (598)
T KOG4158|consen 428 GPNAVVNYEKADTWAAGALAYEIFGRSNPFYK--RGEMLLDTRT-----------------YQESQLPALPSRVPPVARQ 488 (598)
T ss_pred CCceeeccchhhhhhhhhhHHHHhccCCcccc--cchheechhh-----------------hhhhhCCCCcccCChHHHH
Confidence 24589999999999999999999876 3443322100 0111122334567888999
Q ss_pred HHhHcccCCCCCCCCHHHHHHHH
Q 001544 1022 LAMECTVESPDERITAKEIVRRL 1044 (1057)
Q Consensus 1022 li~~cl~~dP~~Rps~~evl~~L 1044 (1057)
++...+++||.+|+++.-+...+
T Consensus 489 lV~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 489 LVFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred HHHHHhcCCccccCCccHHHhHH
Confidence 99999999999999887665554
No 438
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.76 E-value=2e-20 Score=173.12 Aligned_cols=182 Identities=31% Similarity=0.531 Sum_probs=147.7
Q ss_pred ccCccCCcEEEccCCcCCCCCCcccccccccceeecccccCcccCCcccccccccceEEecCeeeeecCCccccCccccc
Q 001544 458 IGNLANLVTLDLGGNKFNGSIPIALGKLQKLQLLNLDDNKLEGSIPDDICGLVELYKLALGDNKLSGQIPACFGNLASLR 537 (1057)
Q Consensus 458 ~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 537 (1057)
+.++++++.|.||+|+++ .+|..+..+.+|+.|++++|+|+ ..|..++.+++|+.|+++-|++. ..|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 456778899999999999 78888999999999999999998 78889999999999999999888 7888888888888
Q ss_pred ccccCCccccccccccccccccccEEEeccccccCCCchhhccccccceeccccccccccccccccCccccceecccccc
Q 001544 538 ELWLGPNELISFIPSTFWNIKDIMYVNFSSNFLTGPLPLEIENLKALTTLDFSMNNLSGVIPTTIGGLKGLQYLFLGHNR 617 (1057)
Q Consensus 538 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 617 (1057)
.|+|..|.+.+ ..+|+.|..++.|+.|+|++|.+. .+|..++++++||.|.+..|.
T Consensus 106 vldltynnl~e-----------------------~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdnd 161 (264)
T KOG0617|consen 106 VLDLTYNNLNE-----------------------NSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDND 161 (264)
T ss_pred hhhcccccccc-----------------------ccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCc
Confidence 87777776543 245666777788888888888887 778888888888888888888
Q ss_pred cccccCccccccCccceecccCccccCCCcccccCcccc---cccccCCCcccC
Q 001544 618 LQGSIPDSVGDLISLKSLNLSNNNLSGPIPTSLEKLSDL---KELNLSFNKLEG 668 (1057)
Q Consensus 618 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L---~~l~ls~N~l~~ 668 (1057)
+- .+|..++.+++|+.|.+.+|+++ .+|+.++++.-+ +.+.+.+|+|-.
T Consensus 162 ll-~lpkeig~lt~lrelhiqgnrl~-vlppel~~l~l~~~k~v~r~E~NPwv~ 213 (264)
T KOG0617|consen 162 LL-SLPKEIGDLTRLRELHIQGNRLT-VLPPELANLDLVGNKQVMRMEENPWVN 213 (264)
T ss_pred hh-hCcHHHHHHHHHHHHhcccceee-ecChhhhhhhhhhhHHHHhhhhCCCCC
Confidence 87 78888888888888888888888 677776665332 345566666643
No 439
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.75 E-value=5.7e-18 Score=202.93 Aligned_cols=196 Identities=23% Similarity=0.270 Sum_probs=162.5
Q ss_pred HhCCCCCCceeccccCeEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcC---CCCceeEeeeeccCCeeEEE
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIR---HRNLTKIISSCSNEDFKALI 843 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lV 843 (1057)
..+.|.+.+.||+|+||+||+|...+|+.||+|+-+.... .+|.--.+++.|++ -+.|..+..++.-.+.-++|
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv 772 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLV 772 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHHHccCCcceee
Confidence 4457888899999999999999988899999998754432 23333445556665 24455566666667888899
Q ss_pred EEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeC-------CCCcEEEEccccc
Q 001544 844 LEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD-------DNMVAHLSDFGIA 916 (1057)
Q Consensus 844 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~-------~~~~~kl~Dfg~a 916 (1057)
+||.+.|+|.+++.. .+.+++.-++.+..|+++.+++|| ..+||||||||+|.++. ....++|+|||.+
T Consensus 773 ~ey~~~Gtlld~~N~-~~~m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~s 848 (974)
T KOG1166|consen 773 SEYSPYGTLLDLINT-NKVMDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRS 848 (974)
T ss_pred eeccccccHHHhhcc-CCCCCchhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccCCCCcccceEEEecccc
Confidence 999999999999884 456999999999999999999999 99999999999999995 2346899999999
Q ss_pred ccccCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCC
Q 001544 917 KLLIGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRK 969 (1057)
Q Consensus 917 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~ 969 (1057)
..+.-..........++|-++-.+|...+..|++.+|-|.++.+++-|+.|++
T Consensus 849 iDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 849 IDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred eeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 88765545556667788999999999999999999999999999999999975
No 440
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.75 E-value=4.1e-20 Score=207.69 Aligned_cols=181 Identities=30% Similarity=0.246 Sum_probs=83.8
Q ss_pred EeCCCCCccc-cCCcccccccccceeecccccccCC----CCccccccCCCCeEeccCCCCCC------CCCcccccCCC
Q 001544 100 LDLNFNRLSG-EIPWELGNLAKLEKLLLHNNFLTGT----IPFSIFKLSSLLDLKLSDNNLTG------TIPSHNLGNLS 168 (1057)
Q Consensus 100 L~L~~n~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~n~l~~------~~p~~~l~~l~ 168 (1057)
|+|..+.+++ ..+..+..+..|+.|+++++.++.. ++..+...++|++|+++++.+.+ .++ ..+..++
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~-~~l~~~~ 81 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLL-QGLTKGC 81 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHH-HHHHhcC
Confidence 3444444442 2333344444455555555544321 33333444445555555554431 011 1244455
Q ss_pred CCceeEccCCcccccCchhhhcccc---CCeeEeeccCCccccCccccCCCCcccEEEeeccccccCccccccCC-CCCc
Q 001544 169 SLQLLDLSDNQLSGSIPSFIFKISS---LQALHFGNNRLSGELPANICDNLPFLNFFSVYKNMFYGGISSTLSNC-KHLR 244 (1057)
Q Consensus 169 ~L~~L~Ls~n~l~~~~p~~l~~l~~---L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l-~~L~ 244 (1057)
+|+.|++++|.+.+..+..+..+.+ |++|++++|++++.....+ ...+..+ ++|+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l---------------------~~~l~~~~~~L~ 140 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLL---------------------AKGLKDLPPALE 140 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHH---------------------HHHHHhCCCCce
Confidence 6666666666665545555554444 6666666666553111111 1122333 4555
Q ss_pred EEEccCCCCcCC----ccccccCcCCCcEEeeeccccccc----cCccccccccccEEEeecCccc
Q 001544 245 ILDLSFNDLWGD----IPKEIGNLTKLKELFLDFNILQGE----IPHTVGNLHNLEYLSLVNNELV 302 (1057)
Q Consensus 245 ~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 302 (1057)
.|++++|.+++. ++..+..+++|++|++++|.+++. ++..+..+++|++|++++|.++
T Consensus 141 ~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~ 206 (319)
T cd00116 141 KLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLT 206 (319)
T ss_pred EEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccC
Confidence 555555555422 222344445555555555555521 2223333445666666665554
No 441
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.75 E-value=4.1e-20 Score=207.69 Aligned_cols=206 Identities=28% Similarity=0.304 Sum_probs=141.0
Q ss_pred EeeecccCc-ccccccccCCCCCcEEeCCCCCcccc----CCcccccccccceeecccccccC------CCCccccccCC
Q 001544 76 LNISYLSLT-GNIPRQLGNLSSLEILDLNFNRLSGE----IPWELGNLAKLEKLLLHNNFLTG------TIPFSIFKLSS 144 (1057)
Q Consensus 76 l~l~~~~l~-g~~~~~l~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~L~~n~l~~------~~p~~~~~l~~ 144 (1057)
|+|.++.++ +.....+..++.|++|+++++.+++. ++..+...++|++|+++++.+.+ .++..+..+++
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~ 82 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCG 82 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCc
Confidence 566666666 33445566677788888888887543 56667777788888888887762 34456777888
Q ss_pred CCeEeccCCCCCCCCCcccccCCCC---CceeEccCCcccc----cCchhhhcc-ccCCeeEeeccCCccccCccccCCC
Q 001544 145 LLDLKLSDNNLTGTIPSHNLGNLSS---LQLLDLSDNQLSG----SIPSFIFKI-SSLQALHFGNNRLSGELPANICDNL 216 (1057)
Q Consensus 145 L~~L~Ls~n~l~~~~p~~~l~~l~~---L~~L~Ls~n~l~~----~~p~~l~~l-~~L~~L~L~~N~l~~~~p~~~~~~l 216 (1057)
|++|++++|.+.+..+. .+..+.+ |++|++++|.+++ .+...+..+ ++|++|++++|.+++..+..+
T Consensus 83 L~~L~l~~~~~~~~~~~-~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~---- 157 (319)
T cd00116 83 LQELDLSDNALGPDGCG-VLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEAL---- 157 (319)
T ss_pred eeEEEccCCCCChhHHH-HHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHH----
Confidence 88899988888754443 3444444 9999999988873 333455666 788889998888875332221
Q ss_pred CcccEEEeeccccccCccccccCCCCCcEEEccCCCCcCC----ccccccCcCCCcEEeeeccccccc----cCcccccc
Q 001544 217 PFLNFFSVYKNMFYGGISSTLSNCKHLRILDLSFNDLWGD----IPKEIGNLTKLKELFLDFNILQGE----IPHTVGNL 288 (1057)
Q Consensus 217 ~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l 288 (1057)
...+..+++|++|++++|.+++. ++..+..+++|++|+|++|.+++. ++..+..+
T Consensus 158 -----------------~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~ 220 (319)
T cd00116 158 -----------------AKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASL 220 (319)
T ss_pred -----------------HHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhccc
Confidence 23455667788888888887642 333455566888888888887643 23445667
Q ss_pred ccccEEEeecCcccc
Q 001544 289 HNLEYLSLVNNELVG 303 (1057)
Q Consensus 289 ~~L~~L~L~~N~l~~ 303 (1057)
++|++|++++|++++
T Consensus 221 ~~L~~L~ls~n~l~~ 235 (319)
T cd00116 221 KSLEVLNLGDNNLTD 235 (319)
T ss_pred CCCCEEecCCCcCch
Confidence 778888888888765
No 442
>PRK10345 hypothetical protein; Provisional
Probab=99.74 E-value=2e-17 Score=169.79 Aligned_cols=137 Identities=14% Similarity=0.230 Sum_probs=107.8
Q ss_pred CCCCceeccccCeEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHHHhc-----CCCCceeEeeeeccCC---e-eE
Q 001544 771 FSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERAFKSFDTECEVMKSI-----RHRNLTKIISSCSNED---F-KA 841 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~---~-~~ 841 (1057)
+...++||+|+||.||. ..+++.. +||++........+.+.+|+++++++ .||||++++|++.++. . ..
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 34568899999999996 4334444 79998765444557899999999999 5799999999998763 3 33
Q ss_pred EEEEE--ccCCChhHHHhcCCccCCHHHHHHHHHHHHHHH-HHHHhCCCCCeEEccCCCCCeeeCC----CCcEEEEccc
Q 001544 842 LILEY--MRNGSLEKCLYSGNYILDIFQRLNIMIDVASAL-EYLHFGYSAPVIHCDLKPSNVLLDD----NMVAHLSDFG 914 (1057)
Q Consensus 842 lV~E~--~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L-~~LH~~~~~~ivH~Dlkp~Nill~~----~~~~kl~Dfg 914 (1057)
+|+|| +.+|+|.+++.+.. +++. ..++.|++.++ +||| +.+|+||||||+||+++. ++.++|+||+
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~~--~~e~--~~~~~~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~ 154 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQCR--YEED--VAQLRQLLKKLKRYLL---DNRIVTMELKPQNILCQRISESEVIPVVCDNI 154 (210)
T ss_pred EEecCCCCcchhHHHHHHccc--ccHh--HHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence 78999 55799999997643 5554 35678888887 9999 999999999999999974 3479999954
Q ss_pred cc
Q 001544 915 IA 916 (1057)
Q Consensus 915 ~a 916 (1057)
-+
T Consensus 155 G~ 156 (210)
T PRK10345 155 GE 156 (210)
T ss_pred CC
Confidence 44
No 443
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.73 E-value=1.2e-19 Score=168.06 Aligned_cols=164 Identities=37% Similarity=0.593 Sum_probs=124.9
Q ss_pred ccCCCCCcEEeCCCCCccccCCcccccccccceeecccccccCCCCccccccCCCCeEeccCCCCCCCCCcccccCCCCC
Q 001544 91 LGNLSSLEILDLNFNRLSGEIPWELGNLAKLEKLLLHNNFLTGTIPFSIFKLSSLLDLKLSDNNLTGTIPSHNLGNLSSL 170 (1057)
Q Consensus 91 l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~l~~L 170 (1057)
+.++++++.|-||+|.++ .+|+.+..|.+|+.|++++|+++ .+|.+++.+++|++|+++-|++. .+|. .|+.++.|
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lpr-gfgs~p~l 104 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPR-GFGSFPAL 104 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCcc-ccCCCchh
Confidence 557778888888888888 77888888888999999888888 78888888899999999888886 6665 58889999
Q ss_pred ceeEccCCccc-ccCchhhhccccCCeeEeeccCCccccCccccCCCCcccEEEeeccccccCccccccCCCCCcEEEcc
Q 001544 171 QLLDLSDNQLS-GSIPSFIFKISSLQALHFGNNRLSGELPANICDNLPFLNFFSVYKNMFYGGISSTLSNCKHLRILDLS 249 (1057)
Q Consensus 171 ~~L~Ls~n~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~Ls 249 (1057)
+.|||.+|+++ ..+|..|+.++.|+.|+|++|.+. .+|. .++++++|+.|.+.
T Consensus 105 evldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~-------------------------dvg~lt~lqil~lr 158 (264)
T KOG0617|consen 105 EVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPP-------------------------DVGKLTNLQILSLR 158 (264)
T ss_pred hhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCCh-------------------------hhhhhcceeEEeec
Confidence 99999988886 467888888888888888888775 3333 34566667777777
Q ss_pred CCCCcCCccccccCcCCCcEEeeeccccccccCcccc
Q 001544 250 FNDLWGDIPKEIGNLTKLKELFLDFNILQGEIPHTVG 286 (1057)
Q Consensus 250 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 286 (1057)
.|.+- .+|+.++.++.|++|++.+|+++ .+|..++
T Consensus 159 dndll-~lpkeig~lt~lrelhiqgnrl~-vlppel~ 193 (264)
T KOG0617|consen 159 DNDLL-SLPKEIGDLTRLRELHIQGNRLT-VLPPELA 193 (264)
T ss_pred cCchh-hCcHHHHHHHHHHHHhcccceee-ecChhhh
Confidence 66664 45666666666666666666666 4444433
No 444
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.72 E-value=6.9e-19 Score=196.41 Aligned_cols=225 Identities=26% Similarity=0.328 Sum_probs=178.1
Q ss_pred eeccccCeEEEEEE----ecCCcEEEEEEeeccch--hHHHHHHHHHHHHHhcC-CCCceeEeeeeccCCeeEEEEEEcc
Q 001544 776 LIGRGSFGSVYIAR----LQNGIEVAVKTFDLQHE--RAFKSFDTECEVMKSIR-HRNLTKIISSCSNEDFKALILEYMR 848 (1057)
Q Consensus 776 ~lg~G~~g~Vy~~~----~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~E~~~ 848 (1057)
++|+|+||.|+.++ .+.|..+|+|+.+.... ........|..++...+ ||.++++.-.+..+...+++.+|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 37999999999774 23478899998854421 11124556788888886 9999999999999999999999999
Q ss_pred CCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCcccc
Q 001544 849 NGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQ 928 (1057)
Q Consensus 849 ~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 928 (1057)
+|.+...+.+... ++..........++-+++++| +.+|+|||+|++||+++.+|++++.|||.++......
T Consensus 81 gg~lft~l~~~~~-f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~----- 151 (612)
T KOG0603|consen 81 GGDLFTRLSKEVM-FDELDVAFYLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK----- 151 (612)
T ss_pred cchhhhccccCCc-hHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHhHhhh-----
Confidence 9999988776553 666667777888899999999 9999999999999999999999999999998653222
Q ss_pred ccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhhcccccccchh
Q 001544 929 TQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKH 1008 (1057)
Q Consensus 929 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1057)
...||.-|||||++. .+...+|.||||++++||+||..||.. .....+- ...
T Consensus 152 -~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~------------------~~~~~Il-------~~~ 203 (612)
T KOG0603|consen 152 -IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG------------------DTMKRIL-------KAE 203 (612)
T ss_pred -hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch------------------HHHHHHh-------hhc
Confidence 127899999999987 567889999999999999999999865 0111110 112
Q ss_pred hHHHHHHHHHHHHHHhHcccCCCCCCCCH
Q 001544 1009 FAAKEQCASSVFNLAMECTVESPDERITA 1037 (1057)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 1037 (1057)
...+.+.+..+.+++..+...+|..|.-.
T Consensus 204 ~~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 204 LEMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred cCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 23345667788889999999999999855
No 445
>smart00090 RIO RIO-like kinase.
Probab=99.70 E-value=8.5e-17 Score=169.72 Aligned_cols=142 Identities=18% Similarity=0.145 Sum_probs=112.2
Q ss_pred CCCCCCceeccccCeEEEEEE--ecCCcEEEEEEeeccch------------------------hHHHHHHHHHHHHHhc
Q 001544 769 NGFSENNLIGRGSFGSVYIAR--LQNGIEVAVKTFDLQHE------------------------RAFKSFDTECEVMKSI 822 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~--~~~~~~vavK~~~~~~~------------------------~~~~~~~~E~~~l~~l 822 (1057)
..|++.+.||+|+||.||+|. ..+|+.||||+++.... .....+.+|++.+.++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 357788999999999999998 56899999999864321 0123467899999999
Q ss_pred CCC--CceeEeeeeccCCeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEEccCCCCC
Q 001544 823 RHR--NLTKIISSCSNEDFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAP-VIHCDLKPSN 899 (1057)
Q Consensus 823 ~h~--niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-ivH~Dlkp~N 899 (1057)
.+. .+.+++++ ...++||||++++++....... ......+...++.|++.++++|| +.+ |+||||||+|
T Consensus 108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~g~iiH~Dikp~N 179 (237)
T smart00090 108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD-VEPEEEEEFELYDDILEEMRKLY---KEGELVHGDLSEYN 179 (237)
T ss_pred HhcCCCCCeeeEe----cCceEEEEEecCCccccccccc-CCcchHHHHHHHHHHHHHHHHHH---hcCCEEeCCCChhh
Confidence 753 34445543 2348999999998887654332 23566677899999999999999 899 9999999999
Q ss_pred eeeCCCCcEEEEcccccccc
Q 001544 900 VLLDDNMVAHLSDFGIAKLL 919 (1057)
Q Consensus 900 ill~~~~~~kl~Dfg~a~~~ 919 (1057)
|+++ ++.++++|||.+...
T Consensus 180 Ili~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 180 ILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred EEEE-CCCEEEEEChhhhcc
Confidence 9999 889999999998754
No 446
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.68 E-value=2.1e-16 Score=165.76 Aligned_cols=134 Identities=24% Similarity=0.363 Sum_probs=114.1
Q ss_pred ceeccccCeEEEEEEecCCcEEEEEEeeccch--------hHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 775 NLIGRGSFGSVYIARLQNGIEVAVKTFDLQHE--------RAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
+.||+|++|.||+|.. +|..|+||+...... .....+.+|++++..++|+++.....++.+.+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 578899998643221 1234678899999999999988777777777788999999
Q ss_pred ccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccccccc
Q 001544 847 MRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 918 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 918 (1057)
++|++|.+++.... . ++..++.+++.+++++| +.+++|||++|.||+++ ++.++++|||.+..
T Consensus 81 ~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG----M-EELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999886533 2 78899999999999999 99999999999999999 78999999998864
No 447
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.68 E-value=3.1e-16 Score=162.34 Aligned_cols=140 Identities=21% Similarity=0.213 Sum_probs=110.9
Q ss_pred HHhCCCCCCceeccccCeEEEEEEecCCcEEEEEEeeccch----------------------hHHHHHHHHHHHHHhcC
Q 001544 766 QATNGFSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHE----------------------RAFKSFDTECEVMKSIR 823 (1057)
Q Consensus 766 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----------------------~~~~~~~~E~~~l~~l~ 823 (1057)
....-|...+.||+|+||.||+|..++|+.||||++..... .....+..|+.++.++.
T Consensus 12 ~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 91 (198)
T cd05144 12 KRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALY 91 (198)
T ss_pred HcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHH
Confidence 33334777899999999999999988899999998754321 01124677899999998
Q ss_pred CCC--ceeEeeeeccCCeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCee
Q 001544 824 HRN--LTKIISSCSNEDFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVL 901 (1057)
Q Consensus 824 h~n--iv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nil 901 (1057)
|++ +...++. ...++||||+++++|.+.... .....++.+++.++.++| +.+|+||||||+||+
T Consensus 92 ~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~~lh---~~gi~H~Dl~p~Nil 157 (198)
T cd05144 92 EEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIVKAY---KHGIIHGDLSEFNIL 157 (198)
T ss_pred HcCCCCCceeec----CCceEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHHHHH---HCCCCcCCCCcccEE
Confidence 774 4444442 345899999999999775321 235678999999999999 899999999999999
Q ss_pred eCCCCcEEEEcccccccc
Q 001544 902 LDDNMVAHLSDFGIAKLL 919 (1057)
Q Consensus 902 l~~~~~~kl~Dfg~a~~~ 919 (1057)
+++++.++|+|||.+...
T Consensus 158 l~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 158 VDDDEKIYIIDWPQMVST 175 (198)
T ss_pred EcCCCcEEEEECCccccC
Confidence 999999999999999654
No 448
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.67 E-value=5.2e-16 Score=185.32 Aligned_cols=138 Identities=19% Similarity=0.288 Sum_probs=113.4
Q ss_pred HhCCCCCCceeccccCeEEEEEEecCCcEEEEEEeecc--c------hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCC
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQ--H------ERAFKSFDTECEVMKSIRHRNLTKIISSCSNED 838 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 838 (1057)
....|...+.||+|+||+||+|.+.. ..+++|+.... . ....+++.+|++++++++|++++....++....
T Consensus 331 ~~~~~~~~~~iG~G~~g~Vy~~~~~~-~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~ 409 (535)
T PRK09605 331 VKRRKIPDHLIGKGAEADIKKGEYLG-RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE 409 (535)
T ss_pred cccccCccceeccCCcEEEEEEeecC-ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence 34455678999999999999998764 34555443111 1 122456889999999999999998888877777
Q ss_pred eeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccccccc
Q 001544 839 FKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 918 (1057)
Q Consensus 839 ~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 918 (1057)
..++||||+++++|.+++. ....++.+++++++||| +.+++|||+||+||++ .++.++|+|||+++.
T Consensus 410 ~~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH---~~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLH---KAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred CCEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHH---hCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 7899999999999998875 45789999999999999 9999999999999999 678999999999875
No 449
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.66 E-value=3.6e-17 Score=179.37 Aligned_cols=243 Identities=24% Similarity=0.265 Sum_probs=159.0
Q ss_pred CCCCceeccccCeEEEEEEecC----CcEEEEEEeeccchhHHHHHHHHHHHHHhcC-CCCceeEe------eee-----
Q 001544 771 FSENNLIGRGSFGSVYIARLQN----GIEVAVKTFDLQHERAFKSFDTECEVMKSIR-HRNLTKII------SSC----- 834 (1057)
Q Consensus 771 ~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~------~~~----- 834 (1057)
..+.+..+..+++.+....... ..-++.|..+...-.......+++..+.-.. |+..+..- ..+
T Consensus 246 ~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~v 325 (516)
T KOG1033|consen 246 SSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNKV 325 (516)
T ss_pred ccccccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCcccccCCCCchhhhcccccc
Confidence 3444566666666666554322 2334444433332122233334444444443 44332221 011
Q ss_pred ccCCeeEEEEEEccCCChhHHHhcCC--ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEc
Q 001544 835 SNEDFKALILEYMRNGSLEKCLYSGN--YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSD 912 (1057)
Q Consensus 835 ~~~~~~~lV~E~~~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 912 (1057)
....+.|+.|++++..+|.+|+...+ ...++.....++.|++.|++| ++.+|||+||.||+...+..+||+|
T Consensus 326 ~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgD 399 (516)
T KOG1033|consen 326 GKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGD 399 (516)
T ss_pred ccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhh
Confidence 11235789999999999999996544 567888899999999999998 6889999999999999999999999
Q ss_pred ccccccccCCC----CccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhh-CCCCCCcccccccchhhhhhh
Q 001544 913 FGIAKLLIGED----QSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFT-RRKPTDEIFSGEMTLKHWVND 987 (1057)
Q Consensus 913 fg~a~~~~~~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 987 (1057)
||+...+.... ....++...||..||+||.+.+..++.|+|+||+|++++|++. =..+++. ...
T Consensus 400 Fgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er----~~t------- 468 (516)
T KOG1033|consen 400 FGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER----IAT------- 468 (516)
T ss_pred hhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH----HHh-------
Confidence 99998764333 2445667789999999999999999999999999999999998 2222211 000
Q ss_pred ccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHH
Q 001544 988 FLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVR 1042 (1057)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1042 (1057)
..++-|.... .....+. +.-..++.+++.+.|.+||++.++..
T Consensus 469 -----~~d~r~g~ip------~~~~~d~-p~e~~ll~~lls~~p~~RP~~~~~~~ 511 (516)
T KOG1033|consen 469 -----LTDIRDGIIP------PEFLQDY-PEEYTLLQQLLSPSPEERPSAIEVAL 511 (516)
T ss_pred -----hhhhhcCCCC------hHHhhcC-cHHHHHHHHhcCCCcccCchHHHHhh
Confidence 1111111110 0011111 22357899999999999996655543
No 450
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.66 E-value=5.2e-16 Score=161.19 Aligned_cols=130 Identities=22% Similarity=0.398 Sum_probs=107.0
Q ss_pred eeccccCeEEEEEEecCCcEEEEEEeeccc--------hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEc
Q 001544 776 LIGRGSFGSVYIARLQNGIEVAVKTFDLQH--------ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYM 847 (1057)
Q Consensus 776 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 847 (1057)
.||+|+||.||+|.. +|..|++|+..... .....++.+|++++..++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 389999999999985 47899999864321 112356788999999999887665555555666778999999
Q ss_pred cCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccccccc
Q 001544 848 RNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 918 (1057)
Q Consensus 848 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 918 (1057)
+|++|.+++..... .++.+++++++++| +.+++|||++|.||+++ ++.++++|||.+..
T Consensus 80 ~g~~l~~~~~~~~~--------~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGND--------ELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcHH--------HHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999988754321 78999999999999 99999999999999999 89999999999875
No 451
>PLN03150 hypothetical protein; Provisional
Probab=99.63 E-value=1.1e-15 Score=184.21 Aligned_cols=150 Identities=31% Similarity=0.516 Sum_probs=115.6
Q ss_pred CCCcchHHHHHHHHHhcccCCCCcccCCCCCCCCCCc----ccceeEecCC--C--CceeEEeeecccCcccccccccCC
Q 001544 23 TSIDIDQDALLALKDHITYDPTNFFAKNWLTNSTMVC----NWTGVTCDIN--Q--RRVTALNISYLSLTGNIPRQLGNL 94 (1057)
Q Consensus 23 ~~~~~d~~~l~~~k~~~~~~~~~~~~~~w~~~~~~~c----~w~gv~c~~~--~--~~v~~l~l~~~~l~g~~~~~l~~l 94 (1057)
++.+.|.+||++||+++. +|.. .+|.. ..|| .|.||+|+.. . .+|+.|+|++++++|.+|+.++++
T Consensus 368 ~t~~~~~~aL~~~k~~~~-~~~~---~~W~g--~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L 441 (623)
T PLN03150 368 KTLLEEVSALQTLKSSLG-LPLR---FGWNG--DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKL 441 (623)
T ss_pred ccCchHHHHHHHHHHhcC-Cccc---CCCCC--CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCC
Confidence 455678999999999985 4432 37843 3343 7999999532 1 258888888888888888888888
Q ss_pred CCCcEEeCCCCCccccCCcccccccccceeecccccccCCCCccccccCCCCeEeccCCCCCCCCCcccccC-CCCCcee
Q 001544 95 SSLEILDLNFNRLSGEIPWELGNLAKLEKLLLHNNFLTGTIPFSIFKLSSLLDLKLSDNNLTGTIPSHNLGN-LSSLQLL 173 (1057)
Q Consensus 95 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~-l~~L~~L 173 (1057)
++|++|+|++|.++|.+|..++.+++|+.|+|++|+++|.+|..++++++|++|+|++|+++|.+|.. ++. +.++..+
T Consensus 442 ~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~-l~~~~~~~~~l 520 (623)
T PLN03150 442 RHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAA-LGGRLLHRASF 520 (623)
T ss_pred CCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChH-HhhccccCceE
Confidence 88888888888888888888888888888888888888888888888888888888888888888764 433 2455566
Q ss_pred EccCCc
Q 001544 174 DLSDNQ 179 (1057)
Q Consensus 174 ~Ls~n~ 179 (1057)
++++|.
T Consensus 521 ~~~~N~ 526 (623)
T PLN03150 521 NFTDNA 526 (623)
T ss_pred EecCCc
Confidence 666664
No 452
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.58 E-value=1.2e-14 Score=143.76 Aligned_cols=135 Identities=19% Similarity=0.302 Sum_probs=115.0
Q ss_pred CCceeccccCeEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCC--CCceeEeeeeccCCeeEEEEEEccCC
Q 001544 773 ENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRH--RNLTKIISSCSNEDFKALILEYMRNG 850 (1057)
Q Consensus 773 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lV~E~~~~g 850 (1057)
+.+.||+|.++.||++..++ ..++||....... ...+.+|+++++.++| ..+++++++...++..+++|||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 35789999999999999864 7899999865433 4678899999999976 58999999988888899999999988
Q ss_pred ChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccccccc
Q 001544 851 SLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 918 (1057)
Q Consensus 851 sL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 918 (1057)
.+... +......++.+++++++++|.....+++|||++|+||++++.+.++++|||.++.
T Consensus 79 ~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 79 TLDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 77653 5567788999999999999943335799999999999999999999999999874
No 453
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.58 E-value=1.6e-15 Score=177.61 Aligned_cols=212 Identities=24% Similarity=0.295 Sum_probs=143.6
Q ss_pred HhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEE
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILE 845 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 845 (1057)
...+|..++.|..|+||.||.++.+ ..+.+|+|+ .++.- +.+- ++.....|.+|
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~l-----ilRn--ilt~a~npfvv----------------- 135 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL-----ILRN--ILTFAGNPFVV----------------- 135 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhcc-cccch-----hhhc--cccccCCccee-----------------
Confidence 4568889999999999999999765 467788853 22111 1110 22222333333
Q ss_pred EccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCC--
Q 001544 846 YMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED-- 923 (1057)
Q Consensus 846 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-- 923 (1057)
|+-.+.+...+ +++.. ++.+++|+| +.+|+|||+||+|.+++.-|++|+.|||+++......
T Consensus 136 ----gDc~tllk~~g-~lPvd--------mvla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at 199 (1205)
T KOG0606|consen 136 ----GDCATLLKNIG-PLPVD--------MVLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT 199 (1205)
T ss_pred ----chhhhhcccCC-CCcch--------hhHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence 33333333322 23322 277899999 9999999999999999999999999999986531110
Q ss_pred -----------CccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchh
Q 001544 924 -----------QSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPIS 992 (1057)
Q Consensus 924 -----------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 992 (1057)
.........||+.|+|||++....|+..+|.|++|+++||.+.|+.||... ..+.-+...+.+.
T Consensus 200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGd-tpeelfg~visd~---- 274 (1205)
T KOG0606|consen 200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD-TPEELFGQVISDD---- 274 (1205)
T ss_pred hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCC-CHHHHHhhhhhhh----
Confidence 011223457999999999999999999999999999999999999998762 1112222222111
Q ss_pred HHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCH
Q 001544 993 MMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITA 1037 (1057)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 1037 (1057)
.. ..+..+..+++..+++.+.++.+|..|--.
T Consensus 275 --------i~-----wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt 306 (1205)
T KOG0606|consen 275 --------IE-----WPEEDEALPPEAQDLIEQLLRQNPLCRLGT 306 (1205)
T ss_pred --------cc-----ccccCcCCCHHHHHHHHHHHHhChHhhccc
Confidence 11 111123456788999999999999999833
No 454
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.57 E-value=1.3e-14 Score=149.04 Aligned_cols=135 Identities=22% Similarity=0.257 Sum_probs=98.2
Q ss_pred CceeccccCeEEEEEEecCCcEEEEEEeeccchh--HHHH----------------------HHHHHHHHHhcCCCC--c
Q 001544 774 NNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHER--AFKS----------------------FDTECEVMKSIRHRN--L 827 (1057)
Q Consensus 774 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~----------------------~~~E~~~l~~l~h~n--i 827 (1057)
.+.||+|+||+||+|...+|+.||||+++..... .... ...|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999999888999999998653211 1111 134566666664432 4
Q ss_pred eeEeeeeccCCeeEEEEEEccCCChhH-HHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCC-CCeEEccCCCCCeeeCCC
Q 001544 828 TKIISSCSNEDFKALILEYMRNGSLEK-CLYSGNYILDIFQRLNIMIDVASALEYLHFGYS-APVIHCDLKPSNVLLDDN 905 (1057)
Q Consensus 828 v~l~~~~~~~~~~~lV~E~~~~gsL~~-~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~Dlkp~Nill~~~ 905 (1057)
.+.+++ ...++||||++++.+.. .+.... .. .++..++.+++.++.++| . .+|+||||||+||+++ +
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh---~~~~ivH~Dl~p~Nili~-~ 150 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLY---REAGLVHGDLSEYNILVD-D 150 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHh---hccCcCcCCCChhhEEEE-C
Confidence 444443 23589999999954321 111111 11 567889999999999999 7 9999999999999999 9
Q ss_pred CcEEEEcccccccc
Q 001544 906 MVAHLSDFGIAKLL 919 (1057)
Q Consensus 906 ~~~kl~Dfg~a~~~ 919 (1057)
+.++++|||.+...
T Consensus 151 ~~~~liDfg~a~~~ 164 (187)
T cd05119 151 GKVYIIDVPQAVEI 164 (187)
T ss_pred CcEEEEECcccccc
Confidence 99999999999754
No 455
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.54 E-value=5.6e-16 Score=183.44 Aligned_cols=256 Identities=24% Similarity=0.292 Sum_probs=199.8
Q ss_pred CCCCCCceeccccCeEEEEEEec--CCcEEEEEEeeccc--hhHHHHHHHHHHHHHhcC-CCCceeEeeeeccCCeeEEE
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQ--NGIEVAVKTFDLQH--ERAFKSFDTECEVMKSIR-HRNLTKIISSCSNEDFKALI 843 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV 843 (1057)
..|...+.||+|+|+.|-.+... ....+|+|.+.... .........|..+-..+. |+|++++++...+.+..+++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 35677788999999999888653 34556777664432 334455666888878886 99999999999999999999
Q ss_pred EEEccCCChhHHH-hcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC-cEEEEcccccccccC
Q 001544 844 LEYMRNGSLEKCL-YSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM-VAHLSDFGIAKLLIG 921 (1057)
Q Consensus 844 ~E~~~~gsL~~~l-~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfg~a~~~~~ 921 (1057)
.||.+++++.+-+ +......+......++.|+..++.|+|. ..+++|||+||+|.+++..+ ..+++|||+|..+..
T Consensus 100 ~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred cCcccccccccccccCCccCCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 9999999999888 4443356667778899999999999995 67899999999999999999 999999999988765
Q ss_pred -CCCccccccccc-cccccCccccCC-CCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhh
Q 001544 922 -EDQSMTQTQTLA-TLGYMAPEYGRE-GRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIID 998 (1057)
Q Consensus 922 -~~~~~~~~~~~~-t~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1057)
.+.........| ++.|+|||...+ ....+..|+||.|+++.-+++|..||+...........|......
T Consensus 178 ~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~-------- 249 (601)
T KOG0590|consen 178 KNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGR-------- 249 (601)
T ss_pred cCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccc--------
Confidence 444555555677 999999999877 456788999999999999999999998876665555555433110
Q ss_pred cccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHH
Q 001544 999 ANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVR 1042 (1057)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1042 (1057)
.....+........++..+++..+|..|.+.+++..
T Consensus 250 --------~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 250 --------FTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred --------cccCccccCChhhhhcccccccCCchhccccccccc
Confidence 011122334556778899999999999999887754
No 456
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.53 E-value=7.8e-14 Score=147.62 Aligned_cols=135 Identities=18% Similarity=0.246 Sum_probs=106.4
Q ss_pred Cceec-cccCeEEEEEEecCCcEEEEEEeeccc-------------hhHHHHHHHHHHHHHhcCCCCc--eeEeeeeccC
Q 001544 774 NNLIG-RGSFGSVYIARLQNGIEVAVKTFDLQH-------------ERAFKSFDTECEVMKSIRHRNL--TKIISSCSNE 837 (1057)
Q Consensus 774 ~~~lg-~G~~g~Vy~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~ 837 (1057)
..+|| .|+.|+||++... +..++||++.... ......+.+|++++.+++|+++ ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 36788 8999999999876 7789999884311 1223567889999999998875 6677764332
Q ss_pred -C---eeEEEEEEccC-CChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEc
Q 001544 838 -D---FKALILEYMRN-GSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSD 912 (1057)
Q Consensus 838 -~---~~~lV~E~~~~-gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 912 (1057)
. ..++||||++| .+|.+++... .++.. .+.++++++++|| +.||+||||||.|||++.++.++++|
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~--~l~~~----~~~~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~v~LID 185 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA--PLSEE----QWQAIGQLIARFH---DAGVYHADLNAHNILLDPDGKFWLID 185 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC--CCCHH----HHHHHHHHHHHHH---HCCCCCCCCCchhEEEcCCCCEEEEE
Confidence 2 23599999997 6999887653 24443 3678999999999 99999999999999999999999999
Q ss_pred cccccc
Q 001544 913 FGIAKL 918 (1057)
Q Consensus 913 fg~a~~ 918 (1057)
||.++.
T Consensus 186 fg~~~~ 191 (239)
T PRK01723 186 FDRGEL 191 (239)
T ss_pred CCCccc
Confidence 999875
No 457
>PLN03150 hypothetical protein; Provisional
Probab=99.51 E-value=8.5e-15 Score=176.42 Aligned_cols=119 Identities=37% Similarity=0.645 Sum_probs=95.5
Q ss_pred ccceeccccccccccccccccCccccceecccccccccccCccccccCccceecccCccccCCCcccccCcccccccccC
Q 001544 583 ALTTLDFSMNNLSGVIPTTIGGLKGLQYLFLGHNRLQGSIPDSVGDLISLKSLNLSNNNLSGPIPTSLEKLSDLKELNLS 662 (1057)
Q Consensus 583 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls 662 (1057)
.++.|+|++|.++|.+|..++.+++|+.|+|++|+++|.+|..++.+++|+.|||++|+++|.+|..+.++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 46778888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred CCcccCcCCCC--CCCcccCcccccCCcccCCCCCCCCCCCcc
Q 001544 663 FNKLEGEIPRG--GPFVNFSAKSFMGNNLLCGSPNLQVPPCRA 703 (1057)
Q Consensus 663 ~N~l~~~~p~~--~~~~~~~~~~~~~n~~~cg~~~~~~~~c~~ 703 (1057)
+|+++|.+|.. ..+.+.....+.+|+.+||.|. ..+|..
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~--l~~C~~ 539 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG--LRACGP 539 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCC--CCCCcc
Confidence 88888888863 2223344556889999999875 346753
No 458
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.46 E-value=1.3e-12 Score=150.38 Aligned_cols=140 Identities=21% Similarity=0.240 Sum_probs=101.5
Q ss_pred CceeccccCeEEEEEEecCCcEEEEEEeeccchhHH----------------------------------------HHHH
Q 001544 774 NNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERAF----------------------------------------KSFD 813 (1057)
Q Consensus 774 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~~~ 813 (1057)
.+.||+|++|.||+|++++|+.||||+.++...... -+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 378999999999999999999999999865421100 0244
Q ss_pred HHHHHHHhcC----CCCceeEeeee-ccCCeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHH-HHHHHHhCCC
Q 001544 814 TECEVMKSIR----HRNLTKIISSC-SNEDFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVAS-ALEYLHFGYS 887 (1057)
Q Consensus 814 ~E~~~l~~l~----h~niv~l~~~~-~~~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~-~L~~LH~~~~ 887 (1057)
+|++.+.+++ |.+-+.+-..+ ......++||||++|+++.++........ .+.+++.++++ .+.++| .
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~---~~~~ia~~~~~~~l~ql~---~ 275 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGL---DRKALAENLARSFLNQVL---R 275 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCC---CHHHHHHHHHHHHHHHHH---h
Confidence 5666555552 33333333333 23455789999999999988765322112 24456776666 467889 8
Q ss_pred CCeEEccCCCCCeeeCCCCcEEEEcccccccc
Q 001544 888 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 919 (1057)
Q Consensus 888 ~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 919 (1057)
.|++|+|++|.||+++.++.++++|||++..+
T Consensus 276 ~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 276 DGFFHADLHPGNIFVLKDGKIIALDFGIVGRL 307 (437)
T ss_pred CCceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence 99999999999999999999999999998765
No 459
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.40 E-value=1.9e-14 Score=157.67 Aligned_cols=165 Identities=31% Similarity=0.486 Sum_probs=94.2
Q ss_pred cccccccCccCCcEEEccCCcCCCCCCcccccccccceeecccccCcccCCcccccccccceEEecCeeeeecCCccccC
Q 001544 453 RIPKEIGNLANLVTLDLGGNKFNGSIPIALGKLQKLQLLNLDDNKLEGSIPDDICGLVELYKLALGDNKLSGQIPACFGN 532 (1057)
Q Consensus 453 ~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~ 532 (1057)
++|..+..+..|+.+.|.+|.|. .+|..+.++..|++|||+.|+++ ..|..+|.++ |+.|-+++|+++ .+|..++.
T Consensus 89 elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~ 164 (722)
T KOG0532|consen 89 ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGL 164 (722)
T ss_pred cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCccccc
Confidence 45556666666666777777766 56666777777777777777776 5566666554 566666666666 55555665
Q ss_pred cccccccccCCccccccccccccccccccEEEeccccccCCCchhhccccccceeccccccccccccccccCccccceec
Q 001544 533 LASLRELWLGPNELISFIPSTFWNIKDIMYVNFSSNFLTGPLPLEIENLKALTTLDFSMNNLSGVIPTTIGGLKGLQYLF 612 (1057)
Q Consensus 533 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 612 (1057)
+..|.+|+.+.|++.+ +|..+.++.+|+.|.+..|++. .+|+.+.. -.|..||
T Consensus 165 ~~tl~~ld~s~nei~s-------------------------lpsql~~l~slr~l~vrRn~l~-~lp~El~~-LpLi~lD 217 (722)
T KOG0532|consen 165 LPTLAHLDVSKNEIQS-------------------------LPSQLGYLTSLRDLNVRRNHLE-DLPEELCS-LPLIRLD 217 (722)
T ss_pred chhHHHhhhhhhhhhh-------------------------chHHhhhHHHHHHHHHhhhhhh-hCCHHHhC-Cceeeee
Confidence 5666665555555444 3444445555555555555554 23334442 2355555
Q ss_pred ccccccccccCccccccCccceecccCccccCCCcccc
Q 001544 613 LGHNRLQGSIPDSVGDLISLKSLNLSNNNLSGPIPTSL 650 (1057)
Q Consensus 613 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l 650 (1057)
+|.|+++ .+|-.|.+|+.|++|-|.+|.|. ..|+++
T Consensus 218 fScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqI 253 (722)
T KOG0532|consen 218 FSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQI 253 (722)
T ss_pred cccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHH
Confidence 5555555 45555555555555555555555 344443
No 460
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.38 E-value=5e-13 Score=137.24 Aligned_cols=204 Identities=21% Similarity=0.303 Sum_probs=142.9
Q ss_pred HHhcCCCCceeEeeeeccCC-----eeEEEEEEccCCChhHHHhcC---CccCCHHHHHHHHHHHHHHHHHHHhCCCCCe
Q 001544 819 MKSIRHRNLTKIISSCSNED-----FKALILEYMRNGSLEKCLYSG---NYILDIFQRLNIMIDVASALEYLHFGYSAPV 890 (1057)
Q Consensus 819 l~~l~h~niv~l~~~~~~~~-----~~~lV~E~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 890 (1057)
+-++-|.|+++++.||.+.+ ...++.|||+.|++..++++. ...+......+|+.||..||.||| .|+++|
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLh-s~~Ppi 199 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLH-SCDPPI 199 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhh-ccCCcc
Confidence 44557999999999986543 467899999999999998653 356788888999999999999999 678999
Q ss_pred EEccCCCCCeeeCCCCcEEEEcccccccc--cCCCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCC
Q 001544 891 IHCDLKPSNVLLDDNMVAHLSDFGIAKLL--IGEDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRR 968 (1057)
Q Consensus 891 vH~Dlkp~Nill~~~~~~kl~Dfg~a~~~--~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~ 968 (1057)
+|+++..+-|++..+|-+|++--.-.... .............+-++|.|||.......+.++|||+||+...||..+.
T Consensus 200 ihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailE 279 (458)
T KOG1266|consen 200 IHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILE 279 (458)
T ss_pred ccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHhe
Confidence 99999999999999998888532211111 0001111222334677999999988888888999999999999999886
Q ss_pred CCCCcccccccchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHH
Q 001544 969 KPTDEIFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLK 1046 (1057)
Q Consensus 969 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1046 (1057)
.--.. ++.... ..+.+......... ..-.+++.+|++..|..||+|++++.|.-.
T Consensus 280 iq~tn---seS~~~----------~ee~ia~~i~~len----------~lqr~~i~kcl~~eP~~rp~ar~llfHpll 334 (458)
T KOG1266|consen 280 IQSTN---SESKVE----------VEENIANVIIGLEN----------GLQRGSITKCLEGEPNGRPDARLLLFHPLL 334 (458)
T ss_pred eccCC---Ccceee----------hhhhhhhheeeccC----------ccccCcCcccccCCCCCCcchhhhhcCcee
Confidence 53111 100000 00000000010000 011356889999999999999999988643
No 461
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.37 E-value=3.3e-14 Score=155.84 Aligned_cols=175 Identities=33% Similarity=0.505 Sum_probs=132.2
Q ss_pred cCCcEEEccCCcCCCCCCcccccccccceeecccccCcccCCcccccccccceEEecCeeeeecCCccccCccccccccc
Q 001544 462 ANLVTLDLGGNKFNGSIPIALGKLQKLQLLNLDDNKLEGSIPDDICGLVELYKLALGDNKLSGQIPACFGNLASLRELWL 541 (1057)
Q Consensus 462 ~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 541 (1057)
..-...||+.|++. .+|..+..+..|+.+.|..|.+. .+|..++++..|+.|+|+.|+++ ..|..++.++
T Consensus 75 tdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp------- 144 (722)
T KOG0532|consen 75 TDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP------- 144 (722)
T ss_pred cchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-------
Confidence 33445566666665 45666655666666666666665 45555555555555555555555 3444444433
Q ss_pred CCccccccccccccccccccEEEeccccccCCCchhhccccccceeccccccccccccccccCccccceecccccccccc
Q 001544 542 GPNELISFIPSTFWNIKDIMYVNFSSNFLTGPLPLEIENLKALTTLDFSMNNLSGVIPTTIGGLKGLQYLFLGHNRLQGS 621 (1057)
Q Consensus 542 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 621 (1057)
|+.|-+++|+++ .+|..++.+..|..||.+.|.+. .+|..++++.+|+.|++..|++. .
T Consensus 145 ------------------Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~ 203 (722)
T KOG0532|consen 145 ------------------LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-D 203 (722)
T ss_pred ------------------ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-h
Confidence 455667777777 47778888899999999999998 67889999999999999999999 6
Q ss_pred cCccccccCccceecccCccccCCCcccccCcccccccccCCCcccCc
Q 001544 622 IPDSVGDLISLKSLNLSNNNLSGPIPTSLEKLSDLKELNLSFNKLEGE 669 (1057)
Q Consensus 622 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~ 669 (1057)
+|..+..| .|..||+|.|+++ .+|-.|.++..|++|-|.+|+|+.+
T Consensus 204 lp~El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqSP 249 (722)
T KOG0532|consen 204 LPEELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQSP 249 (722)
T ss_pred CCHHHhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCCCC
Confidence 78788865 5999999999999 8999999999999999999999975
No 462
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.31 E-value=7.4e-11 Score=137.07 Aligned_cols=144 Identities=18% Similarity=0.194 Sum_probs=94.0
Q ss_pred CCCCCCceeccccCeEEEEEEecC-CcEEEEEEeeccchhH----------------------------------HH---
Q 001544 769 NGFSENNLIGRGSFGSVYIARLQN-GIEVAVKTFDLQHERA----------------------------------FK--- 810 (1057)
Q Consensus 769 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~----------------------------------~~--- 810 (1057)
..|+. +.||+|++|.||+|+.++ |+.||||+.++..... .+
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 35665 799999999999999887 9999999996542110 11
Q ss_pred ---HHHHHHHHHHhcC----CCCceeEeeeecc-CCeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHH-HHH
Q 001544 811 ---SFDTECEVMKSIR----HRNLTKIISSCSN-EDFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASA-LEY 881 (1057)
Q Consensus 811 ---~~~~E~~~l~~l~----h~niv~l~~~~~~-~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~-L~~ 881 (1057)
++.+|+..+.+++ +...+.+-..+.+ ....++||||++|+.+.+...-.....+.. .++...++. +..
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~---~la~~~v~~~~~Q 275 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMK---LLAERGVEVFFTQ 275 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHH---HHHHHHHHHHHHH
Confidence 2344554444442 4443444333322 456789999999999987422111112221 122222221 223
Q ss_pred HHhCCCCCeEEccCCCCCeeeCCCC----cEEEEcccccccc
Q 001544 882 LHFGYSAPVIHCDLKPSNVLLDDNM----VAHLSDFGIAKLL 919 (1057)
Q Consensus 882 LH~~~~~~ivH~Dlkp~Nill~~~~----~~kl~Dfg~a~~~ 919 (1057)
++ ..|++|+|+||.||+++.++ .++++|||++..+
T Consensus 276 if---~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l 314 (537)
T PRK04750 276 VF---RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL 314 (537)
T ss_pred HH---hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence 34 68999999999999999888 9999999998765
No 463
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.30 E-value=2.6e-12 Score=148.66 Aligned_cols=195 Identities=39% Similarity=0.564 Sum_probs=99.9
Q ss_pred EEeCCCCCccccCCcccccccccceeecccccccCCCCccccccC-CCCeEeccCCCCCCCCCcccccCCCCCceeEccC
Q 001544 99 ILDLNFNRLSGEIPWELGNLAKLEKLLLHNNFLTGTIPFSIFKLS-SLLDLKLSDNNLTGTIPSHNLGNLSSLQLLDLSD 177 (1057)
Q Consensus 99 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~Ls~n~l~~~~p~~~l~~l~~L~~L~Ls~ 177 (1057)
.|+++.|.+... +..+..++.++.|++.+|.++ .+|...+.+. +|+.|++++|++. .+|. .++.+++|+.|++++
T Consensus 97 ~l~~~~~~~~~~-~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~-~~~~l~~L~~L~l~~ 172 (394)
T COG4886 97 SLDLNLNRLRSN-ISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPS-PLRNLPNLKNLDLSF 172 (394)
T ss_pred eeeccccccccC-chhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhh-hhhccccccccccCC
Confidence 455555555322 223444455666666666666 5555555553 6666666666665 3432 255666666666666
Q ss_pred CcccccCchhhhccccCCeeEeeccCCccccCccccCCCCcccEEEeeccccccCccccccCCCCCcEEEccCCCCcCCc
Q 001544 178 NQLSGSIPSFIFKISSLQALHFGNNRLSGELPANICDNLPFLNFFSVYKNMFYGGISSTLSNCKHLRILDLSFNDLWGDI 257 (1057)
Q Consensus 178 n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 257 (1057)
|+++ .+|...+.+++|+.|++++|+++ .+|..+ .....|++|++++|.+. ..
T Consensus 173 N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~-------------------------~~~~~L~~l~~~~N~~~-~~ 224 (394)
T COG4886 173 NDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEI-------------------------ELLSALEELDLSNNSII-EL 224 (394)
T ss_pred chhh-hhhhhhhhhhhhhheeccCCccc-cCchhh-------------------------hhhhhhhhhhhcCCcce-ec
Confidence 6666 34444445566666666666665 333321 22233555555555322 33
Q ss_pred cccccCcCCCcEEeeeccccccccCccccccccccEEEeecCccccccCccccccccccEEEecCCccccC
Q 001544 258 PKEIGNLTKLKELFLDFNILQGEIPHTVGNLHNLEYLSLVNNELVGTVPATIFNVSTLKLIELSNNTFFGS 328 (1057)
Q Consensus 258 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 328 (1057)
+..+.++.++..|.+++|++. ..+..++.++++++|++++|+++. ++. +..+.+++.|++++|.+...
T Consensus 225 ~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~~-i~~-~~~~~~l~~L~~s~n~~~~~ 292 (394)
T COG4886 225 LSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQISS-ISS-LGSLTNLRELDLSGNSLSNA 292 (394)
T ss_pred chhhhhcccccccccCCceee-eccchhccccccceeccccccccc-ccc-ccccCccCEEeccCcccccc
Confidence 344455555555555555554 224445555555555555555542 222 44455555555555555433
No 464
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.28 E-value=3.7e-12 Score=147.37 Aligned_cols=198 Identities=37% Similarity=0.537 Sum_probs=128.3
Q ss_pred EEEccCCcCCCCCCcccccccccceeecccccCcccCCccccccc-ccceEEecCeeeeecCCccccCcccccccccCCc
Q 001544 466 TLDLGGNKFNGSIPIALGKLQKLQLLNLDDNKLEGSIPDDICGLV-ELYKLALGDNKLSGQIPACFGNLASLRELWLGPN 544 (1057)
Q Consensus 466 ~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 544 (1057)
.++++.|.+. ..+..+..++.++.|++.+|+++ .++.....+. +|+.|++++|++. .+|..++.+++|+.|++++|
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 4555555553 22333444455666666666665 3444444443 6666666666665 34445666666666666666
Q ss_pred cccccccccccccccccEEEeccccccCCCchhhccccccceeccccccccccccccccCccccceecccccccccccCc
Q 001544 545 ELISFIPSTFWNIKDIMYVNFSSNFLTGPLPLEIENLKALTTLDFSMNNLSGVIPTTIGGLKGLQYLFLGHNRLQGSIPD 624 (1057)
Q Consensus 545 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 624 (1057)
++..+.+.. ...+.|+.|++++|+++. +|........|++|++++|++. ..+..+..+.++..|.+++|++. ..+.
T Consensus 174 ~l~~l~~~~-~~~~~L~~L~ls~N~i~~-l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~ 249 (394)
T COG4886 174 DLSDLPKLL-SNLSNLNNLDLSGNKISD-LPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPE 249 (394)
T ss_pred hhhhhhhhh-hhhhhhhheeccCCcccc-CchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccc
Confidence 666653322 255666677777777774 4444445566888888888544 45667778888888888888887 4467
Q ss_pred cccccCccceecccCccccCCCcccccCcccccccccCCCcccCcCCC
Q 001544 625 SVGDLISLKSLNLSNNNLSGPIPTSLEKLSDLKELNLSFNKLEGEIPR 672 (1057)
Q Consensus 625 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~ 672 (1057)
.++.+.++++|++++|+++. ++. +..+.+++.|++++|.+....|.
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~-i~~-~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISS-ISS-LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred hhccccccceeccccccccc-ccc-ccccCccCEEeccCccccccchh
Confidence 77888888888888888873 333 77888888888888888876664
No 465
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.28 E-value=3.6e-12 Score=143.52 Aligned_cols=249 Identities=22% Similarity=0.215 Sum_probs=182.8
Q ss_pred CCCCCceecc--ccCeEEEEEEe---cCCcEEEEEEeecc--chhHHHHHHHHHHHHHhcC-CCCceeEeeeeccCCeeE
Q 001544 770 GFSENNLIGR--GSFGSVYIARL---QNGIEVAVKTFDLQ--HERAFKSFDTECEVMKSIR-HRNLTKIISSCSNEDFKA 841 (1057)
Q Consensus 770 ~~~~~~~lg~--G~~g~Vy~~~~---~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 841 (1057)
.|.+.+.+|+ |.+|.||.+.. .++..+|+|+-+.. ......+=.+|+.....++ |++.++.+..+.+.+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4556688999 99999999976 36889999984322 2222333456777777774 999999999999999999
Q ss_pred EEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHH----HHHHHHhCCCCCeEEccCCCCCeeeCCC-CcEEEEccccc
Q 001544 842 LILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVAS----ALEYLHFGYSAPVIHCDLKPSNVLLDDN-MVAHLSDFGIA 916 (1057)
Q Consensus 842 lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~----~L~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~Dfg~a 916 (1057)
+-+|++. .++.++.+.....++....+.+..+..+ |+.++| +..++|-|+||.||+...+ ...+++|||+.
T Consensus 195 iqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~~~~kp~~i~~~~~~~s~~~~df~~v 270 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLH---SNNIVHDDLKPANIFTTSDWTSCKLTDFGLV 270 (524)
T ss_pred eeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccC---CCcccccccchhheecccccceeecCCccee
Confidence 9999985 6888887776666888888888888888 999999 9999999999999999999 88999999999
Q ss_pred ccccCCCCccc---cccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhH
Q 001544 917 KLLIGEDQSMT---QTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISM 993 (1057)
Q Consensus 917 ~~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 993 (1057)
..+........ .....+...|++||... +.++.++|+|++|.+..+..++..+...- ....|.....
T Consensus 271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g-----~~~~W~~~r~---- 340 (524)
T KOG0601|consen 271 SKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVG-----KNSSWSQLRQ---- 340 (524)
T ss_pred EEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCC-----CCCCcccccc----
Confidence 88754432111 12225677899999874 56788999999999999999987754321 0111211100
Q ss_pred HHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHH
Q 001544 994 MKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRR 1043 (1057)
Q Consensus 994 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1043 (1057)
.+.+ .+.......++...+..|++.+|..|++++++..+
T Consensus 341 --~~ip---------~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 341 --GYIP---------LEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred --ccCc---------hhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 0000 00111223445558889999999999998887653
No 466
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.25 E-value=1.7e-11 Score=123.69 Aligned_cols=128 Identities=23% Similarity=0.263 Sum_probs=97.1
Q ss_pred CceeccccCeEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCc-eeEeeeeccCCeeEEEEEEccCCCh
Q 001544 774 NNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNL-TKIISSCSNEDFKALILEYMRNGSL 852 (1057)
Q Consensus 774 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~E~~~~gsL 852 (1057)
.+.++.|.++.||+++.. +..|++|+...... ....+.+|+++++.+.+.++ .+++.+.. +..++||||++|.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCcc
Confidence 367899999999999876 78899998754432 22456789999999865544 45555433 345799999999887
Q ss_pred hHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCC-----eEEccCCCCCeeeCCCCcEEEEccccccc
Q 001544 853 EKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAP-----VIHCDLKPSNVLLDDNMVAHLSDFGIAKL 918 (1057)
Q Consensus 853 ~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-----ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 918 (1057)
.+. . .....++.+++++++.|| ..+ ++|||++|.||+++ ++.++++|||.+..
T Consensus 79 ~~~----~-----~~~~~~~~~l~~~l~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 79 LTE----D-----FSDPENLEKIAKLLKKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred ccc----c-----ccCHHHHHHHHHHHHHHh---CCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 653 0 112346789999999999 666 59999999999999 67899999998764
No 467
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.24 E-value=4.5e-13 Score=139.39 Aligned_cols=114 Identities=20% Similarity=0.260 Sum_probs=50.3
Q ss_pred ccCCCCCcEEEccCCCCcCC----ccccccCcCCCcEEeeecccccc----ccCccccccccccEEEeecCccccccCcc
Q 001544 237 LSNCKHLRILDLSFNDLWGD----IPKEIGNLTKLKELFLDFNILQG----EIPHTVGNLHNLEYLSLVNNELVGTVPAT 308 (1057)
Q Consensus 237 l~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 308 (1057)
|...+.|+.+.++.|.|... +...+..+++|+.|||.+|.++. .+...++.+++|+.|++++|.+.......
T Consensus 181 ~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a 260 (382)
T KOG1909|consen 181 FQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIA 260 (382)
T ss_pred HHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHH
Confidence 33344444444444444211 12233444444555554444442 12223344445555555555544322222
Q ss_pred cc-----ccccccEEEecCCccccC---CCCCcccCCCCCceEEecCccc
Q 001544 309 IF-----NVSTLKLIELSNNTFFGS---LPSSTDVQLPNLEELYLWGNNF 350 (1057)
Q Consensus 309 ~~-----~l~~L~~L~Ls~N~l~~~---~~~~~~~~l~~L~~L~L~~N~l 350 (1057)
|. ..++|+.|.+.+|.++.. .-.......|.|+.|+|++|.+
T Consensus 261 ~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 261 FVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 21 234555555555555311 0001111356777777777777
No 468
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.21 E-value=1.6e-10 Score=131.22 Aligned_cols=167 Identities=17% Similarity=0.223 Sum_probs=129.3
Q ss_pred ecCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEEccCCChhHHHhcCCccCCHHHHH
Q 001544 790 LQNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEYMRNGSLEKCLYSGNYILDIFQRL 869 (1057)
Q Consensus 790 ~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~ 869 (1057)
..++.+|.|++.+...........+.++-++.+|||+|++++..++.++..|+|+|-+. .|..++.. +......
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~----l~~~~v~ 107 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE----LGKEEVC 107 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH----hHHHHHH
Confidence 44688999998876655556677888999999999999999999999999999999875 46666654 2355666
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccCCCCccccccccccccccCccccCCCCCC
Q 001544 870 NIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATLGYMAPEYGREGRVS 949 (1057)
Q Consensus 870 ~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~ 949 (1057)
-.+.||+.||.|||+ +.+++|++|.-.-|++++.|+.||++|.++....+... ......--..|..|+.+....
T Consensus 108 ~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s~-- 181 (690)
T KOG1243|consen 108 LGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPSE-- 181 (690)
T ss_pred HHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCccc--
Confidence 788999999999985 67899999999999999999999999998865432221 111112223466776543332
Q ss_pred ccchHHHHHHHHHHHhhCC
Q 001544 950 TKGDVYSFGILLMETFTRR 968 (1057)
Q Consensus 950 ~~~Dv~s~G~il~elltg~ 968 (1057)
-..|.|.||++++|++.|.
T Consensus 182 ~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 182 WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred cchhhhhHHHHHHHHhCcc
Confidence 2469999999999999993
No 469
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.19 E-value=2.6e-10 Score=114.84 Aligned_cols=136 Identities=18% Similarity=0.185 Sum_probs=100.3
Q ss_pred CceeccccCeEEEEEEecC-------CcEEEEEEeeccc----------------------hhHHHHHH----HHHHHHH
Q 001544 774 NNLIGRGSFGSVYIARLQN-------GIEVAVKTFDLQH----------------------ERAFKSFD----TECEVMK 820 (1057)
Q Consensus 774 ~~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~----------------------~~~~~~~~----~E~~~l~ 820 (1057)
...||.|.-+.||.|...+ +..+|||+.+... ....+.+. +|++.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3579999999999997543 5799999874320 01122333 8999999
Q ss_pred hcCC--CCceeEeeeeccCCeeEEEEEEccCCChhH-HHhcCCccCCHHHHHHHHHHHHHHHHHH-HhCCCCCeEEccCC
Q 001544 821 SIRH--RNLTKIISSCSNEDFKALILEYMRNGSLEK-CLYSGNYILDIFQRLNIMIDVASALEYL-HFGYSAPVIHCDLK 896 (1057)
Q Consensus 821 ~l~h--~niv~l~~~~~~~~~~~lV~E~~~~gsL~~-~l~~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~~~ivH~Dlk 896 (1057)
++.. -++.+++++ ...++||||+.++.+.. .+.. ..++..+...+..+++.++.++ | ..++||||++
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd--~~~~~~~~~~i~~~i~~~l~~l~H---~~glVHGDLs 152 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD--AKLNDEEMKNAYYQVLSMMKQLYK---ECNLVHADLS 152 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc--cccCHHHHHHHHHHHHHHHHHHHH---hCCeecCCCC
Confidence 9853 456666654 45679999998754422 2222 2345566778889999999999 8 8899999999
Q ss_pred CCCeeeCCCCcEEEEcccccccc
Q 001544 897 PSNVLLDDNMVAHLSDFGIAKLL 919 (1057)
Q Consensus 897 p~Nill~~~~~~kl~Dfg~a~~~ 919 (1057)
+.||+++ ++.++++|||.+...
T Consensus 153 ~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 153 EYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred HHHEEEE-CCcEEEEECCCceeC
Confidence 9999997 468999999998754
No 470
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.13 E-value=2.8e-11 Score=136.48 Aligned_cols=250 Identities=20% Similarity=0.143 Sum_probs=177.6
Q ss_pred HhCCCCCCceeccccCeEEEEEEec--CCcEEEEEEeeccchhHHHH--HHHHHHHHHhc-CCCCceeEeeeeccCCeeE
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARLQ--NGIEVAVKTFDLQHERAFKS--FDTECEVMKSI-RHRNLTKIISSCSNEDFKA 841 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~--~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 841 (1057)
...+|..+..||.|.|+.|++...+ ++..|++|...........+ -..|+.+...+ .|.++++....|...+..|
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY 342 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence 3457888999999999999998643 67889999875433222121 12355555555 5899999888888888889
Q ss_pred EEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCC-CcEEEEccccccccc
Q 001544 842 LILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN-MVAHLSDFGIAKLLI 920 (1057)
Q Consensus 842 lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~Dfg~a~~~~ 920 (1057)
+--||+++++......- ...++...++++..|++.++.++| ++.++|+|+||+||++..+ +..+++|||.++.+.
T Consensus 343 ip~e~~~~~s~~l~~~~-~~~~d~~~~~~~~~q~~~~l~~i~---s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~ 418 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRSVT-SQMLDEDPRLRLTAQILTALNVIH---SKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLA 418 (524)
T ss_pred CchhhhcCcchhhhhHH-HHhcCcchhhhhHHHHHhcccccc---chhhhcccccccceeeccchhhhhccccccccccc
Confidence 99999999988766522 234777788999999999999999 9999999999999999886 888999999987431
Q ss_pred CCCCcccccccccccccc--CccccCCCCCCccchHHHHHHHHHHHhhCCCCCCcccccccchhhhhhhccchhHHHhhh
Q 001544 921 GEDQSMTQTQTLATLGYM--APEYGREGRVSTKGDVYSFGILLMETFTRRKPTDEIFSGEMTLKHWVNDFLPISMMKIID 998 (1057)
Q Consensus 921 ~~~~~~~~~~~~~t~~y~--aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1057)
- .........+++ +|+......+..+.|+|+||..+.|.++|..--.. ..+|... .
T Consensus 419 ~-----~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~-------~~~~~~i---------~- 476 (524)
T KOG0601|consen 419 F-----SSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSES-------GVQSLTI---------R- 476 (524)
T ss_pred e-----ecccccccccccccchhhccccccccccccccccccccccccCcccCcc-------cccceee---------e-
Confidence 1 111112233444 55566667788999999999999999998752111 0111110 0
Q ss_pred cccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHHHHHHHHHHhHH
Q 001544 999 ANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAKEIVRRLLKIRD 1049 (1057)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~ 1049 (1057)
.. ..+........+..+.+.+..+++..||.+.+...+.+..++
T Consensus 477 ~~-------~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~~ 520 (524)
T KOG0601|consen 477 SG-------DTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYRD 520 (524)
T ss_pred cc-------cccCCCchHHhhhhhhhhhcCCccccchhhhhhcccchhhhh
Confidence 00 001111122556678888999999999999998887766544
No 471
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.13 E-value=1.3e-12 Score=136.12 Aligned_cols=256 Identities=24% Similarity=0.245 Sum_probs=149.7
Q ss_pred ccccCCCCCcEEeCCCCCcccc----CCcccccccccceeecccc---cccCCCCccccccCCCCeEeccCCCCCCCCCc
Q 001544 89 RQLGNLSSLEILDLNFNRLSGE----IPWELGNLAKLEKLLLHNN---FLTGTIPFSIFKLSSLLDLKLSDNNLTGTIPS 161 (1057)
Q Consensus 89 ~~l~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~L~~n---~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~ 161 (1057)
+.+..+..++.|+||+|.|..+ +...+.+.++|+..++|+= ++...+|..+..+.
T Consensus 24 ~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~------------------ 85 (382)
T KOG1909|consen 24 EELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLS------------------ 85 (382)
T ss_pred HHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHH------------------
Confidence 4456678889999999988643 5566777888888888762 33344555443320
Q ss_pred ccccCCCCCceeEccCCcccccCchh----hhccccCCeeEeeccCCccccCccccCCCCcccEEEeeccccccCccccc
Q 001544 162 HNLGNLSSLQLLDLSDNQLSGSIPSF----IFKISSLQALHFGNNRLSGELPANICDNLPFLNFFSVYKNMFYGGISSTL 237 (1057)
Q Consensus 162 ~~l~~l~~L~~L~Ls~n~l~~~~p~~----l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~l~~n~~~~~~~~~l 237 (1057)
.++-..++|++||||+|.+....+.. +.++.+|++|+|.+|.+.-.-...+...|..|. .....
T Consensus 86 ~aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~------------~~kk~ 153 (382)
T KOG1909|consen 86 KALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELA------------VNKKA 153 (382)
T ss_pred HHHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHH------------HHhcc
Confidence 13445556777777777666444433 345677888888888775322222222221111 01123
Q ss_pred cCCCCCcEEEccCCCCcCC----ccccccCcCCCcEEeeeccccccc----cCccccccccccEEEeecCcccccc----
Q 001544 238 SNCKHLRILDLSFNDLWGD----IPKEIGNLTKLKELFLDFNILQGE----IPHTVGNLHNLEYLSLVNNELVGTV---- 305 (1057)
Q Consensus 238 ~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~---- 305 (1057)
++-+.|+++..++|++... +...|...+.|+.+.++.|.|... +...|..+++|+.|||..|-++...
T Consensus 154 ~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~L 233 (382)
T KOG1909|consen 154 ASKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVAL 233 (382)
T ss_pred CCCcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHH
Confidence 4556788888888888643 334455667788888888877521 2234566677777777777665221
Q ss_pred CccccccccccEEEecCCccccCCCCCcccCCCCCceEEecCccccccCCcccc-----cccccccccccccccccc---
Q 001544 306 PATIFNVSTLKLIELSNNTFFGSLPSSTDVQLPNLEELYLWGNNFSGTLPSFIF-----NASNLSKLSLGDNSFSGL--- 377 (1057)
Q Consensus 306 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~~--- 377 (1057)
...+.. +++|++|++++|.+......++. ..++|+.|.+.+|.|+..
T Consensus 234 akaL~s-------------------------~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~ 288 (382)
T KOG1909|consen 234 AKALSS-------------------------WPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAAL 288 (382)
T ss_pred HHHhcc-------------------------cchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHH
Confidence 122223 34555555555555543333332 245666777777766532
Q ss_pred -ccchhcccccccEEeccCcccC
Q 001544 378 -IPNTFGNLRNLKRLRLYNNYLT 399 (1057)
Q Consensus 378 -~~~~~~~l~~L~~L~L~~N~l~ 399 (1057)
+..++...+.|..|+|++|.+.
T Consensus 289 ~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 289 ALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HHHHHHhcchhhHHhcCCccccc
Confidence 2233455677777777777774
No 472
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.12 E-value=1.1e-11 Score=143.51 Aligned_cols=201 Identities=27% Similarity=0.281 Sum_probs=107.8
Q ss_pred ccCccCCcEEEccCCcCCCCCCcccccccccceeecccccCcccCCcccccccccceEEecCeeeeecCC-ccccCcccc
Q 001544 458 IGNLANLVTLDLGGNKFNGSIPIALGKLQKLQLLNLDDNKLEGSIPDDICGLVELYKLALGDNKLSGQIP-ACFGNLASL 536 (1057)
Q Consensus 458 ~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L 536 (1057)
+..+++|++|+|++|.|+.+. .+..++.|+.|++++|.|+. ...+..+..|+.+++++|++...-+ . ...+.++
T Consensus 114 l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l~~N~i~~--~~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l 188 (414)
T KOG0531|consen 114 LSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELNLSGNLISD--ISGLESLKSLKLLDLSYNRIVDIENDE-LSELISL 188 (414)
T ss_pred hhhhhcchheecccccccccc--chhhccchhhheeccCcchh--ccCCccchhhhcccCCcchhhhhhhhh-hhhccch
Confidence 445666777777777776433 24455567777777777753 2344446677777777777764433 2 4566777
Q ss_pred cccccCCccccccccccccccccccEEEeccccccCCCchhhcccc--ccceeccccccccccccccccCccccceeccc
Q 001544 537 RELWLGPNELISFIPSTFWNIKDIMYVNFSSNFLTGPLPLEIENLK--ALTTLDFSMNNLSGVIPTTIGGLKGLQYLFLG 614 (1057)
Q Consensus 537 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 614 (1057)
+.+++++|.+..+. .+..+..+..+++..|.++...+ +..+. .|+.+++++|++. ..+..+..+..+..|+++
T Consensus 189 ~~l~l~~n~i~~i~--~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~ 263 (414)
T KOG0531|consen 189 EELDLGGNSIREIE--GLDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLS 263 (414)
T ss_pred HHHhccCCchhccc--chHHHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCccc-cccccccccccccccchh
Confidence 77777777766542 22223333334555555553221 11112 2566666666665 333445555666666666
Q ss_pred ccccccccCccccccCccceecccCccccC---CCccc-ccCcccccccccCCCcccCcC
Q 001544 615 HNRLQGSIPDSVGDLISLKSLNLSNNNLSG---PIPTS-LEKLSDLKELNLSFNKLEGEI 670 (1057)
Q Consensus 615 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~---~~p~~-l~~l~~L~~l~ls~N~l~~~~ 670 (1057)
+|++... ..+.....+..+.++.|++.. ..... ....+.+..+++.+|+.....
T Consensus 264 ~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (414)
T KOG0531|consen 264 SNRISNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKIS 321 (414)
T ss_pred hcccccc--ccccccchHHHhccCcchhcchhhhhccccccccccccccccccCcccccc
Confidence 6665522 123444555555566665542 11111 344455555555555555443
No 473
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.12 E-value=1.1e-11 Score=132.64 Aligned_cols=211 Identities=23% Similarity=0.245 Sum_probs=100.9
Q ss_pred ccCCCCeEeccCCCCCCCCC-cccccCCCCCceeEccCCcccc--cCchhhhccccCCeeEeeccCCccccCccccCCCC
Q 001544 141 KLSSLLDLKLSDNNLTGTIP-SHNLGNLSSLQLLDLSDNQLSG--SIPSFIFKISSLQALHFGNNRLSGELPANICDNLP 217 (1057)
Q Consensus 141 ~l~~L~~L~Ls~n~l~~~~p-~~~l~~l~~L~~L~Ls~n~l~~--~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~ 217 (1057)
++++|++..|.++... ..+ ......+++++.||||.|-+.. .+......+++|+.|+|+.|++.-......-.
T Consensus 119 n~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~--- 194 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTL--- 194 (505)
T ss_pred hHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchh---
Confidence 3455555555555443 111 1234455666666666665542 22233445666666666666654221111111
Q ss_pred cccEEEeeccccccCccccccCCCCCcEEEccCCCCcC-CccccccCcCCCcEEeeeccccccccCccccccccccEEEe
Q 001544 218 FLNFFSVYKNMFYGGISSTLSNCKHLRILDLSFNDLWG-DIPKEIGNLTKLKELFLDFNILQGEIPHTVGNLHNLEYLSL 296 (1057)
Q Consensus 218 ~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 296 (1057)
.+++|+.|.|+.|.++- .+-..+..+|+|+.|+|..|...........-+..|+.|||
T Consensus 195 ---------------------~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdL 253 (505)
T KOG3207|consen 195 ---------------------LLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDL 253 (505)
T ss_pred ---------------------hhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccc
Confidence 23344444444444431 12222333445555555554322222223333445555555
Q ss_pred ecCccccccC--ccccccccccEEEecCCccccC-CCCC----cccCCCCCceEEecCccccc-cCCccccccccccccc
Q 001544 297 VNNELVGTVP--ATIFNVSTLKLIELSNNTFFGS-LPSS----TDVQLPNLEELYLWGNNFSG-TLPSFIFNASNLSKLS 368 (1057)
Q Consensus 297 ~~N~l~~~~~--~~~~~l~~L~~L~Ls~N~l~~~-~~~~----~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~ 368 (1057)
++|++-. .+ .....++.|+.|+++.+.+... .|+. ....+++|++|+++.|+|.. ..-..+..+++|+.|.
T Consensus 254 s~N~li~-~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~ 332 (505)
T KOG3207|consen 254 SNNNLID-FDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLR 332 (505)
T ss_pred cCCcccc-cccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhh
Confidence 5555431 11 2233445555555555544311 1111 11356788888888888752 1223445567788888
Q ss_pred ccccccccc
Q 001544 369 LGDNSFSGL 377 (1057)
Q Consensus 369 L~~N~l~~~ 377 (1057)
...|.++..
T Consensus 333 ~~~n~ln~e 341 (505)
T KOG3207|consen 333 ITLNYLNKE 341 (505)
T ss_pred ccccccccc
Confidence 888888754
No 474
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.10 E-value=9e-12 Score=133.16 Aligned_cols=185 Identities=28% Similarity=0.267 Sum_probs=124.2
Q ss_pred ccccccceeecccccccCCCC--ccccccCCCCeEeccCCCCCCCCCc-ccccCCCCCceeEccCCcccccCchhh-hcc
Q 001544 116 GNLAKLEKLLLHNNFLTGTIP--FSIFKLSSLLDLKLSDNNLTGTIPS-HNLGNLSSLQLLDLSDNQLSGSIPSFI-FKI 191 (1057)
Q Consensus 116 ~~l~~L~~L~L~~n~l~~~~p--~~~~~l~~L~~L~Ls~n~l~~~~p~-~~l~~l~~L~~L~Ls~n~l~~~~p~~l-~~l 191 (1057)
.++++|+...|.+..+.. .+ .....+++++.||||+|-+....|- .....||+|+.|+|+.|.+.-...+.. ..+
T Consensus 118 sn~kkL~~IsLdn~~V~~-~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVED-AGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCccccc-cchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 568899999999988873 33 3667889999999999988754332 235689999999999998873322222 256
Q ss_pred ccCCeeEeeccCCccccCccccCCCCcccEEEeeccccccCccccccCCCCCcEEEccCCCCcCCcc--ccccCcCCCcE
Q 001544 192 SSLQALHFGNNRLSGELPANICDNLPFLNFFSVYKNMFYGGISSTLSNCKHLRILDLSFNDLWGDIP--KEIGNLTKLKE 269 (1057)
Q Consensus 192 ~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p--~~l~~l~~L~~ 269 (1057)
+.|+.|.|+.|.++..--..+...+|+|+.|++..|...+.......-+..|+.|||++|++.. .+ ...+.++.|+.
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~-~~~~~~~~~l~~L~~ 275 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLID-FDQGYKVGTLPGLNQ 275 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccc-cccccccccccchhh
Confidence 7899999999999865555556667777777777775444444455566677777777777642 22 34556667777
Q ss_pred Eeeeccccccc-cCcc-----ccccccccEEEeecCccc
Q 001544 270 LFLDFNILQGE-IPHT-----VGNLHNLEYLSLVNNELV 302 (1057)
Q Consensus 270 L~L~~N~l~~~-~p~~-----~~~l~~L~~L~L~~N~l~ 302 (1057)
|+++.+.++.. +|+. ...+++|++|+++.|+|.
T Consensus 276 Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 276 LNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR 314 (505)
T ss_pred hhccccCcchhcCCCccchhhhcccccceeeecccCccc
Confidence 77777666532 1222 234456666666666653
No 475
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.09 E-value=7.6e-10 Score=117.11 Aligned_cols=142 Identities=18% Similarity=0.235 Sum_probs=111.9
Q ss_pred ceeccccCeEEEEEEecCCcEEEEEEeeccch-hHHHHHHHHHHHHHhcCC--CCceeEeeeeccC---CeeEEEEEEcc
Q 001544 775 NLIGRGSFGSVYIARLQNGIEVAVKTFDLQHE-RAFKSFDTECEVMKSIRH--RNLTKIISSCSNE---DFKALILEYMR 848 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~---~~~~lV~E~~~ 848 (1057)
+.++.|..+.||++...+|+.+++|....... .....+.+|+++++.+++ ..+.+++.+..+. +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 67899999999999887778999998754332 134678899999999975 3457777777654 36689999999
Q ss_pred CCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhC-------------------------------------------
Q 001544 849 NGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFG------------------------------------------- 885 (1057)
Q Consensus 849 ~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~------------------------------------------- 885 (1057)
|.++.+.+.. ..++..++..++.++++++++||..
T Consensus 84 G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (223)
T cd05154 84 GRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLL 161 (223)
T ss_pred CEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHH
Confidence 9988775532 2467778888999999999999831
Q ss_pred ----------CCCCeEEccCCCCCeeeCC--CCcEEEEccccccc
Q 001544 886 ----------YSAPVIHCDLKPSNVLLDD--NMVAHLSDFGIAKL 918 (1057)
Q Consensus 886 ----------~~~~ivH~Dlkp~Nill~~--~~~~kl~Dfg~a~~ 918 (1057)
....++|+|++|.||+++. ++.+.++||+.+..
T Consensus 162 ~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 162 RWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 1245799999999999998 67789999998764
No 476
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.08 E-value=4.2e-11 Score=121.40 Aligned_cols=134 Identities=25% Similarity=0.377 Sum_probs=100.7
Q ss_pred ccccccEEEeecCccccccCccccccccccEEEecCCccccCCCCCcccCCCCCceEEecCccccccCCccccccccccc
Q 001544 287 NLHNLEYLSLVNNELVGTVPATIFNVSTLKLIELSNNTFFGSLPSSTDVQLPNLEELYLWGNNFSGTLPSFIFNASNLSK 366 (1057)
Q Consensus 287 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 366 (1057)
..+.|++||||+|.|+ .+..+..-.+.++.|++|+|.+. .+.. ...+++|++|||++|.++ .+..+-..+.+.+.
T Consensus 282 TWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~n--La~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKt 356 (490)
T KOG1259|consen 282 TWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQN--LAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKT 356 (490)
T ss_pred hHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-eehh--hhhcccceEeecccchhH-hhhhhHhhhcCEee
Confidence 3467788888888887 56666666788888888888876 3333 335788888888888887 45555566788888
Q ss_pred cccccccccccccchhcccccccEEeccCcccCCCccccccccCCCcchhhhhccCCCccccc
Q 001544 367 LSLGDNSFSGLIPNTFGNLRNLKRLRLYNNYLTSPELSFLSSLSNCKYLEIIALSGNPLNGII 429 (1057)
Q Consensus 367 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 429 (1057)
|.|+.|.|... ..++.+-+|..|++++|+|...+. ..+..+++-|+++.|.+|++.++.
T Consensus 357 L~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~lde--V~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 357 LKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDE--VNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred eehhhhhHhhh--hhhHhhhhheeccccccchhhHHH--hcccccccHHHHHhhcCCCccccc
Confidence 88888888754 557778888888888888877543 457778888888888888887653
No 477
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.06 E-value=1.5e-09 Score=104.64 Aligned_cols=131 Identities=22% Similarity=0.375 Sum_probs=103.1
Q ss_pred ceeccccCeEEEEEEecCCcEEEEEEeeccc--------hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEEEE
Q 001544 775 NLIGRGSFGSVYIARLQNGIEVAVKTFDLQH--------ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALILEY 846 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 846 (1057)
..+++|+-+.+|.+.+. |.++++|.=.++. .-...+-.+|++++++++--.|...+-+..+.+...++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 35789999999999775 5557777532211 11245677899999999876776666667778888899999
Q ss_pred ccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccccccc
Q 001544 847 MRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 918 (1057)
Q Consensus 847 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 918 (1057)
++|..|.+.+... +..++..+=.-+.-|| ..+|||+|+.++||.+..++ +.++|||++.+
T Consensus 81 I~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA--------RPDLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc--------chHHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999888665 2456777778888999 99999999999999998765 99999999874
No 478
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.05 E-value=3.7e-11 Score=139.00 Aligned_cols=244 Identities=31% Similarity=0.353 Sum_probs=129.7
Q ss_pred CceEEecCccccccCCccccccccccccccccccccccccchhcccccccEEeccCcccCCCccccccccCCCcchhhhh
Q 001544 340 LEELYLWGNNFSGTLPSFIFNASNLSKLSLGDNSFSGLIPNTFGNLRNLKRLRLYNNYLTSPELSFLSSLSNCKYLEIIA 419 (1057)
Q Consensus 340 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~l~~L~~L~ 419 (1057)
++.+.+..|.+.. +-..+..+.+|..|++.+|+|..+ ...+..+++|++|++++|.|+++ ..+..++.|+.|+
T Consensus 74 l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i-----~~l~~l~~L~~L~ 146 (414)
T KOG0531|consen 74 LKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKL-----EGLSTLTLLKELN 146 (414)
T ss_pred HHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheeccccccccc-----cchhhccchhhhe
Confidence 3333344444431 222344455555555555555543 11145556666666666666552 2344444455555
Q ss_pred ccCCCcccccccccccccccccEEEcCCCcccccccccccCccCCcEEEccCCcCCCCCC-cccccccccceeecccccC
Q 001544 420 LSGNPLNGIIPMSAGNLSHSLEELFMPDCNVSGRIPKEIGNLANLVTLDLGGNKFNGSIP-IALGKLQKLQLLNLDDNKL 498 (1057)
Q Consensus 420 Ls~N~l~~~~~~~~~~l~~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p-~~~~~l~~L~~L~L~~N~l 498 (1057)
+++|.+..+ ..+..+++|+.+++++|++...-+ . ...+.+|+.+++.+|.+
T Consensus 147 l~~N~i~~~---------------------------~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i 198 (414)
T KOG0531|consen 147 LSGNLISDI---------------------------SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSI 198 (414)
T ss_pred eccCcchhc---------------------------cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCch
Confidence 555555422 122335566666666666664333 1 35566666666666666
Q ss_pred cccCCcccccccccceEEecCeeeeecCCccccCcc--cccccccCCccccccccccccccccccEEEeccccccCCCch
Q 001544 499 EGSIPDDICGLVELYKLALGDNKLSGQIPACFGNLA--SLRELWLGPNELISFIPSTFWNIKDIMYVNFSSNFLTGPLPL 576 (1057)
Q Consensus 499 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~--~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 576 (1057)
.. ...+..+..+..+++..|.++..-+ +..+. +|+.+++++|++..+ +.
T Consensus 199 ~~--i~~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~~~-------------------------~~ 249 (414)
T KOG0531|consen 199 RE--IEGLDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRISRS-------------------------PE 249 (414)
T ss_pred hc--ccchHHHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCccccc-------------------------cc
Confidence 42 2333334444444566666553222 11222 256655555555432 13
Q ss_pred hhccccccceeccccccccccccccccCccccceecccccccccc---cCcc-ccccCccceecccCccccCCCccc
Q 001544 577 EIENLKALTTLDFSMNNLSGVIPTTIGGLKGLQYLFLGHNRLQGS---IPDS-VGDLISLKSLNLSNNNLSGPIPTS 649 (1057)
Q Consensus 577 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~ 649 (1057)
.+..+..+..|++.+|+++.. ..+.....+..+.++.|.+... .... ......++...+..|.+....+..
T Consensus 250 ~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (414)
T KOG0531|consen 250 GLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISSLD 324 (414)
T ss_pred cccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhhhccccccccccccccccccCccccccccc
Confidence 445566777777777777644 3455566777777777776522 2222 456678888888888887665544
No 479
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.03 E-value=7.9e-09 Score=110.44 Aligned_cols=266 Identities=15% Similarity=0.124 Sum_probs=168.2
Q ss_pred CCceeccccCeEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHHHhc-CCCCceeEeee------e-ccCCeeEEEE
Q 001544 773 ENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERAFKSFDTECEVMKSI-RHRNLTKIISS------C-SNEDFKALIL 844 (1057)
Q Consensus 773 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~------~-~~~~~~~lV~ 844 (1057)
..+.||+|+-+.+|-.- .-...+.|+.......... +.++.|... .||-+-.-+.+ . ..+....+.|
T Consensus 15 ~gr~LgqGgea~ly~l~--e~~d~VAKIYh~Pppa~~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 15 PGRPLGQGGEADLYTLG--EVRDQVAKIYHAPPPAAQA---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCccccCCccceeeecc--hhhchhheeecCCCchHHH---HHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 35789999999999642 1122345666544332211 233444444 45543221111 1 1223356778
Q ss_pred EEccCCChhHHHhcCC------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEccccccc
Q 001544 845 EYMRNGSLEKCLYSGN------YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 918 (1057)
Q Consensus 845 E~~~~gsL~~~l~~~~------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 918 (1057)
..+.+..=-..+.+.+ ...+|...+++++.+|.+.+.|| ..|.+-||+.++|+|+++++.+.+.|-..-..
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHH---hcCCcccccCccceeeecCceEEEEcccceee
Confidence 8776642222222211 45889999999999999999999 99999999999999999999999998554322
Q ss_pred ccCCCCccccccccccccccCccccC-----CCCCCccchHHHHHHHHHHHhhC-CCCCCccccccc---chh-hhhhhc
Q 001544 919 LIGEDQSMTQTQTLATLGYMAPEYGR-----EGRVSTKGDVYSFGILLMETFTR-RKPTDEIFSGEM---TLK-HWVNDF 988 (1057)
Q Consensus 919 ~~~~~~~~~~~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~s~G~il~elltg-~~p~~~~~~~~~---~~~-~~~~~~ 988 (1057)
. .........+|...|.+||.-. +...+...|.|.+|+++++++.| ++||........ ..+ ......
T Consensus 167 ~---~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~ 243 (637)
T COG4248 167 N---ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGR 243 (637)
T ss_pred c---cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcce
Confidence 1 3344555678889999999643 34457789999999999999887 899987532211 111 111100
Q ss_pred cchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCC--CCCCCCHHHHHHHHHHhHHHHhh
Q 001544 989 LPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVES--PDERITAKEIVRRLLKIRDFLLR 1053 (1057)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d--P~~Rps~~evl~~L~~i~~~~~~ 1053 (1057)
.-.. -+...-.............++++..+..+|+... |.-||+++-.+..|..+++++..
T Consensus 244 f~ya----~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~ 306 (637)
T COG4248 244 FAYA----SDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKK 306 (637)
T ss_pred eeec----hhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhh
Confidence 0000 0111111111122223456788888899998764 56799999999999999988754
No 480
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.02 E-value=7.9e-11 Score=119.45 Aligned_cols=138 Identities=23% Similarity=0.205 Sum_probs=108.8
Q ss_pred ccccCcccccccccCCccccccccccccccccccEEEeccccccCCCchhhccccccceeccccccccccccccccCccc
Q 001544 528 ACFGNLASLRELWLGPNELISFIPSTFWNIKDIMYVNFSSNFLTGPLPLEIENLKALTTLDFSMNNLSGVIPTTIGGLKG 607 (1057)
Q Consensus 528 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 607 (1057)
..+..+..|++++|++|.|+.+.. ...-++.++.|++|+|.++.+ +.+..+++|+.||||+|.++ .+..+=.++.+
T Consensus 278 ~~~dTWq~LtelDLS~N~I~~iDE-SvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGN 353 (490)
T KOG1259|consen 278 VSADTWQELTELDLSGNLITQIDE-SVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGN 353 (490)
T ss_pred EecchHhhhhhccccccchhhhhh-hhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcC
Confidence 344556678889999998887653 445578889999999998853 34778899999999999998 44455557889
Q ss_pred cceecccccccccccCccccccCccceecccCccccCCC-cccccCcccccccccCCCcccCcCC
Q 001544 608 LQYLFLGHNRLQGSIPDSVGDLISLKSLNLSNNNLSGPI-PTSLEKLSDLKELNLSFNKLEGEIP 671 (1057)
Q Consensus 608 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~l~ls~N~l~~~~p 671 (1057)
++.|.|+.|.|.. -..++.+-+|..||+++|+|.... -..++++|-|+.+.|.+|++.+.+-
T Consensus 354 IKtL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 354 IKTLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred EeeeehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 9999999999872 345788889999999999997432 3567899999999999999997644
No 481
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.02 E-value=2.3e-10 Score=112.87 Aligned_cols=128 Identities=33% Similarity=0.348 Sum_probs=41.4
Q ss_pred ccccccceeecccccccCCCCcccc-ccCCCCeEeccCCCCCCCCCcccccCCCCCceeEccCCcccccCchhh-hcccc
Q 001544 116 GNLAKLEKLLLHNNFLTGTIPFSIF-KLSSLLDLKLSDNNLTGTIPSHNLGNLSSLQLLDLSDNQLSGSIPSFI-FKISS 193 (1057)
Q Consensus 116 ~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~n~l~~~~p~~~l~~l~~L~~L~Ls~n~l~~~~p~~l-~~l~~ 193 (1057)
.+..++++|+|++|.|+. + ..++ .+.+|+.|+|++|.++ .++ .+..+++|++|++++|.|+. +...+ ..+++
T Consensus 16 ~n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~-~l~--~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~ 89 (175)
T PF14580_consen 16 NNPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQIT-KLE--GLPGLPRLKTLDLSNNRISS-ISEGLDKNLPN 89 (175)
T ss_dssp ----------------------S--TT-TT--EEE-TTS--S---T--T----TT--EEE--SS---S--CHHHHHH-TT
T ss_pred cccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCc-ccc--CccChhhhhhcccCCCCCCc-cccchHHhCCc
Confidence 334455666666666663 2 2344 4566666777777666 343 26667777777777777774 33334 35777
Q ss_pred CCeeEeeccCCccccCccccCCCCcccEEEeeccccccCccccccCCCCCcEEEccCCCCcCCc---cccccCcCCCcEE
Q 001544 194 LQALHFGNNRLSGELPANICDNLPFLNFFSVYKNMFYGGISSTLSNCKHLRILDLSFNDLWGDI---PKEIGNLTKLKEL 270 (1057)
Q Consensus 194 L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~---p~~l~~l~~L~~L 270 (1057)
|++|+|++|+|... .. -..++.+++|++|+|.+|.++..- ...+..+|+|+.|
T Consensus 90 L~~L~L~~N~I~~l-~~-----------------------l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~L 145 (175)
T PF14580_consen 90 LQELYLSNNKISDL-NE-----------------------LEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVL 145 (175)
T ss_dssp --EEE-TTS---SC-CC-----------------------CGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEE
T ss_pred CCEEECcCCcCCCh-HH-----------------------hHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhhee
Confidence 77777777777521 10 124566777777777777776331 1235567777776
Q ss_pred eee
Q 001544 271 FLD 273 (1057)
Q Consensus 271 ~L~ 273 (1057)
|-.
T Consensus 146 D~~ 148 (175)
T PF14580_consen 146 DGQ 148 (175)
T ss_dssp TTE
T ss_pred CCE
Confidence 643
No 482
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.99 E-value=4.8e-09 Score=100.34 Aligned_cols=142 Identities=18% Similarity=0.201 Sum_probs=107.4
Q ss_pred CCceeccccCeEEEEEEecCCcEEEEEEe-ecc-------chhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEEEE
Q 001544 773 ENNLIGRGSFGSVYIARLQNGIEVAVKTF-DLQ-------HERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKALIL 844 (1057)
Q Consensus 773 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~-~~~-------~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 844 (1057)
...++-+|+-+.|+++.++ |+.+.||.- .+. ..-..++..+|++.+.+++--.|....-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 5678999999999999987 787777743 221 1123567788999999987666665555666666667999
Q ss_pred EEccC-CChhHHHhcCCccCCH-HHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCC---cEEEEccccccc
Q 001544 845 EYMRN-GSLEKCLYSGNYILDI-FQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM---VAHLSDFGIAKL 918 (1057)
Q Consensus 845 E~~~~-gsL~~~l~~~~~~l~~-~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~---~~kl~Dfg~a~~ 918 (1057)
||++| .++.+++...-..-.. ......+..|-+.+.-|| ..+|||||+..+||++..++ .+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99987 4777777654422223 333788999999999999 99999999999999997554 458999999864
No 483
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.97 E-value=5.1e-10 Score=137.68 Aligned_cols=270 Identities=26% Similarity=0.267 Sum_probs=134.2
Q ss_pred CCcEEeCCCCC--ccccCCcccccccccceeecccccccCCCCccccccCCCCeEeccCCCCCCCCCcccccCCCCCcee
Q 001544 96 SLEILDLNFNR--LSGEIPWELGNLAKLEKLLLHNNFLTGTIPFSIFKLSSLLDLKLSDNNLTGTIPSHNLGNLSSLQLL 173 (1057)
Q Consensus 96 ~L~~L~L~~n~--l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~l~~L~~L 173 (1057)
.|++|-+.+|. +....++.|..++.|+.|||++|.=-+.+|..++.|-+|++|+|++..++ .+|. .+++|+.|.+|
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~-~l~~Lk~L~~L 623 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPS-GLGNLKKLIYL 623 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccch-HHHHHHhhhee
Confidence 45555555554 33222223555666666666655544556666666666666666666655 5554 35666666666
Q ss_pred EccCCcccccCchhhhccccCCeeEeeccCCccccCccccCCCCcccEEEeeccccccCccccccCCCCCcEEEccCCCC
Q 001544 174 DLSDNQLSGSIPSFIFKISSLQALHFGNNRLSGELPANICDNLPFLNFFSVYKNMFYGGISSTLSNCKHLRILDLSFNDL 253 (1057)
Q Consensus 174 ~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l 253 (1057)
|+..+.-...+|..+..|++|++|.+..-... ........+.++.+|+.+.......
T Consensus 624 nl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~-----------------------~~~~~l~el~~Le~L~~ls~~~~s~ 680 (889)
T KOG4658|consen 624 NLEVTGRLESIPGILLELQSLRVLRLPRSALS-----------------------NDKLLLKELENLEHLENLSITISSV 680 (889)
T ss_pred ccccccccccccchhhhcccccEEEeeccccc-----------------------cchhhHHhhhcccchhhheeecchh
Confidence 66655544444555555666666655433211 0111122334455555555433322
Q ss_pred cCCccccccCcCCCc----EEeeeccccccccCccccccccccEEEeecCccccccCcccccc------ccccEEEecCC
Q 001544 254 WGDIPKEIGNLTKLK----ELFLDFNILQGEIPHTVGNLHNLEYLSLVNNELVGTVPATIFNV------STLKLIELSNN 323 (1057)
Q Consensus 254 ~~~~p~~l~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l------~~L~~L~Ls~N 323 (1057)
.+-..+..++.|. .+.+..+... ..+..+..+.+|+.|.+.++.+......+.... +++..+...++
T Consensus 681 --~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~ 757 (889)
T KOG4658|consen 681 --LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNC 757 (889)
T ss_pred --HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhcc
Confidence 1111222233322 2332222222 344566777788888888777754333221111 11111111111
Q ss_pred ccccCCCCCcccCCCCCceEEecCccccccCCcccccccccccccccccccccc-ccchhcccccccEEeccC
Q 001544 324 TFFGSLPSSTDVQLPNLEELYLWGNNFSGTLPSFIFNASNLSKLSLGDNSFSGL-IPNTFGNLRNLKRLRLYN 395 (1057)
Q Consensus 324 ~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~ 395 (1057)
..- ..+. ...-.|+|+.|++.++.....+.+....+..+..+-+..+.+.+. .-...++++++..+.+.+
T Consensus 758 ~~~-r~l~-~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~~~~~l~~l~~i~~~~l~~ 828 (889)
T KOG4658|consen 758 HML-RDLT-WLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGLRMLCSLGGLPQLYWLPLSF 828 (889)
T ss_pred ccc-cccc-hhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccceeeecCCCCceeEecccCc
Confidence 110 0111 112357888888888877766666666666666666667776665 344455566655555544
No 484
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.95 E-value=2.2e-10 Score=112.99 Aligned_cols=110 Identities=35% Similarity=0.447 Sum_probs=26.6
Q ss_pred ccCcCCCcEEeeeccccccccCcccc-ccccccEEEeecCccccccCccccccccccEEEecCCccccCCCCCcccCCCC
Q 001544 261 IGNLTKLKELFLDFNILQGEIPHTVG-NLHNLEYLSLVNNELVGTVPATIFNVSTLKLIELSNNTFFGSLPSSTDVQLPN 339 (1057)
Q Consensus 261 l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~ 339 (1057)
+.+..++++|+|++|.|+. + +.++ .+.+|+.|+|++|+|+. ++ .+..++.|+.|++++|.++ .++......+|+
T Consensus 15 ~~n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT
T ss_pred ccccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCC-ccccchHHhCCc
Confidence 3444567777777777773 2 2344 46677777777777763 22 3555666666666666665 333222223556
Q ss_pred CceEEecCccccccC-Ccccccccccccccccccccc
Q 001544 340 LEELYLWGNNFSGTL-PSFIFNASNLSKLSLGDNSFS 375 (1057)
Q Consensus 340 L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~ 375 (1057)
|++|+|++|+|...- -..+..+++|+.|+|.+|.++
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 666666666654321 122333444444444444444
No 485
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.92 E-value=2.2e-09 Score=132.18 Aligned_cols=276 Identities=22% Similarity=0.292 Sum_probs=158.3
Q ss_pred cCCeeEeeccCCccccCccccCCCCcccEEEeeccc--cccCccccccCCCCCcEEEccCCCCcCCccccccCcCCCcEE
Q 001544 193 SLQALHFGNNRLSGELPANICDNLPFLNFFSVYKNM--FYGGISSTLSNCKHLRILDLSFNDLWGDIPKEIGNLTKLKEL 270 (1057)
Q Consensus 193 ~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~l~~n~--~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 270 (1057)
..+...+-+|++. .++... ..+.|..|-+..|. +....+..|..++.|++||||+|.=-+.+|..++.|-+|++|
T Consensus 524 ~~rr~s~~~~~~~-~~~~~~--~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL 600 (889)
T KOG4658|consen 524 SVRRMSLMNNKIE-HIAGSS--ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYL 600 (889)
T ss_pred heeEEEEeccchh-hccCCC--CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcc
Confidence 4455555555443 222211 12245555555554 444445567888889999999887667888889989999999
Q ss_pred eeeccccccccCccccccccccEEEeecCccccccCccccccccccEEEecCCccc-cCCCCCcccCCCCCceEEecCcc
Q 001544 271 FLDFNILQGEIPHTVGNLHNLEYLSLVNNELVGTVPATIFNVSTLKLIELSNNTFF-GSLPSSTDVQLPNLEELYLWGNN 349 (1057)
Q Consensus 271 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~~l~~L~~L~L~~N~ 349 (1057)
+|++..++ .+|..+++|+.|.+||+..+.-...+|.....+++|++|.+-..... +..-......+..|+.+......
T Consensus 601 ~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s 679 (889)
T KOG4658|consen 601 DLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISS 679 (889)
T ss_pred cccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecch
Confidence 99998888 78888899999999999888866566666777888888888765421 11111111234444444443322
Q ss_pred ccccCCcccccccccc----ccccccccccccccchhcccccccEEeccCcccCCCccccccccCCCc---chhhhhccC
Q 001544 350 FSGTLPSFIFNASNLS----KLSLGDNSFSGLIPNTFGNLRNLKRLRLYNNYLTSPELSFLSSLSNCK---YLEIIALSG 422 (1057)
Q Consensus 350 l~~~~~~~~~~l~~L~----~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~l~---~L~~L~Ls~ 422 (1057)
. .+-..+..+..|. .+.+.++... ..+..+..+.+|+.|.+.++.+.+...........+. .+..+...+
T Consensus 680 ~--~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~ 756 (889)
T KOG4658|consen 680 V--LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILN 756 (889)
T ss_pred h--HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhc
Confidence 2 1111222333333 3443333333 2355678889999999999888765443333222222 232222222
Q ss_pred CCcccccccccccccccccEEEcCCCcccccccccccCccCCcEEEccCCcCCCC
Q 001544 423 NPLNGIIPMSAGNLSHSLEELFMPDCNVSGRIPKEIGNLANLVTLDLGGNKFNGS 477 (1057)
Q Consensus 423 N~l~~~~~~~~~~l~~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~ 477 (1057)
... .-.......+++|+.|++..|.....+.+....+..+..+.+..+.+.+.
T Consensus 757 ~~~--~r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l 809 (889)
T KOG4658|consen 757 CHM--LRDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGL 809 (889)
T ss_pred ccc--ccccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccc
Confidence 211 11112223455666676666666655555555555555555555555543
No 486
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.88 E-value=3.6e-10 Score=133.57 Aligned_cols=250 Identities=22% Similarity=0.285 Sum_probs=169.0
Q ss_pred HhCCCCCCceeccccCeEEEEEEec-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHhcCCCCceeEeeeeccCCeeEE
Q 001544 767 ATNGFSENNLIGRGSFGSVYIARLQ-NGIEVAVKTFDLQH---ERAFKSFDTECEVMKSIRHRNLTKIISSCSNEDFKAL 842 (1057)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 842 (1057)
..+++.+.+.+.+|.++.++-+.-. .|...+.|+..... ....+....+-.+.-..++|-+++..-.+.-....++
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 4556777788999999999987533 34445555442221 1112222222223223345666655555555677899
Q ss_pred EEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccC-
Q 001544 843 ILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIG- 921 (1057)
Q Consensus 843 V~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~- 921 (1057)
|++|+.+++|...++... ..+..........+.++.+||| ...+.|||++|.|.+...++..+++|||......-
T Consensus 882 ~~~~~~~~~~~Skl~~~~-~~saepaRs~i~~~vqs~e~L~---s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~ 957 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSG-CLSAEPARSPILERVQSLESLH---SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLI 957 (1205)
T ss_pred hhHHhccCCchhhhhcCC-CcccccccchhHHHHhhhhccc---cchhhcccccccchhhcccCCcccCccccccccccc
Confidence 999999999999888766 3444445556667888999999 88899999999999999999999999984322100
Q ss_pred -----C-----------------------CCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCCCCCc
Q 001544 922 -----E-----------------------DQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRKPTDE 973 (1057)
Q Consensus 922 -----~-----------------------~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~ 973 (1057)
. +.........+|+.|.+||...+......+|.|+.|++++|.++|.+||..
T Consensus 958 ~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na 1037 (1205)
T KOG0606|consen 958 PPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNA 1037 (1205)
T ss_pred cCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCC
Confidence 0 000112334689999999999999999999999999999999999999876
Q ss_pred ccccccchhhhhhhccchhHHHhhhcccccccchhhHHHHHHHHHHHHHHhHcccCCCCCCCCHH
Q 001544 974 IFSGEMTLKHWVNDFLPISMMKIIDANLLITEDKHFAAKEQCASSVFNLAMECTVESPDERITAK 1038 (1057)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 1038 (1057)
...... +.. +... .......++..+.+..+++...+..+|.+|..|.
T Consensus 1038 ~tpq~~-f~n------------i~~~-----~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1038 ETPQQI-FEN------------ILNR-----DIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred cchhhh-hhc------------cccC-----CCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 322211 110 0000 0111222345566778889999999999998766
No 487
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.86 E-value=1.9e-08 Score=101.22 Aligned_cols=125 Identities=24% Similarity=0.273 Sum_probs=84.8
Q ss_pred EEEEEEecCCcEEEEEEeeccc--------------------------hhHHHHHHHHHHHHHhcCCC--CceeEeeeec
Q 001544 784 SVYIARLQNGIEVAVKTFDLQH--------------------------ERAFKSFDTECEVMKSIRHR--NLTKIISSCS 835 (1057)
Q Consensus 784 ~Vy~~~~~~~~~vavK~~~~~~--------------------------~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~ 835 (1057)
.||.|...+|..+|||+.+... .......++|++.|.++... ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 4899999889999999874320 01234677899999999765 466666553
Q ss_pred cCCeeEEEEEEcc--CCChhHHHhcCCccCCHHHHHHHHHHHHHHHHH-HHhCCCCCeEEccCCCCCeeeCCCCcEEEEc
Q 001544 836 NEDFKALILEYMR--NGSLEKCLYSGNYILDIFQRLNIMIDVASALEY-LHFGYSAPVIHCDLKPSNVLLDDNMVAHLSD 912 (1057)
Q Consensus 836 ~~~~~~lV~E~~~--~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~-LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 912 (1057)
..++||||++ |..+..+... . ++......++.+++..+.. +| ..|++|||+.+.||+++++ .+.++|
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~-~--~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~~NIlv~~~-~~~iID 149 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDV-D--LSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSEYNILVDDG-KVYIID 149 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHC-G--GGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-STTSEEEETT-CEEE--
T ss_pred ---CCEEEEEecCCCccchhhHHhc-c--ccchhHHHHHHHHHHHHHHHHH---hcCceecCCChhhEEeecc-eEEEEe
Confidence 3479999998 6555543322 1 1133456778888885555 57 8999999999999999987 999999
Q ss_pred ccccccc
Q 001544 913 FGIAKLL 919 (1057)
Q Consensus 913 fg~a~~~ 919 (1057)
||.+...
T Consensus 150 f~qav~~ 156 (188)
T PF01163_consen 150 FGQAVDS 156 (188)
T ss_dssp GTTEEET
T ss_pred cCcceec
Confidence 9998754
No 488
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.82 E-value=4.7e-08 Score=104.52 Aligned_cols=140 Identities=16% Similarity=0.070 Sum_probs=101.3
Q ss_pred ceeccccCeEEEEEEecCCcEEEEEEeeccchh-HH----------HHHHHHHHHHHhcCCCCc--eeEeeeecc-----
Q 001544 775 NLIGRGSFGSVYIARLQNGIEVAVKTFDLQHER-AF----------KSFDTECEVMKSIRHRNL--TKIISSCSN----- 836 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~----------~~~~~E~~~l~~l~h~ni--v~l~~~~~~----- 836 (1057)
+.+-+.....|+++... |+.|.||+....... .. ..+.+|.+.+.++...+| +..+++...
T Consensus 28 e~v~~~~~rrvvr~~~~-g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFELA-GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEEC-CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 44554455557777664 789999987433211 11 147789999988854333 344555432
Q ss_pred CCeeEEEEEEccCC-ChhHHHhcC-CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCC-------CCc
Q 001544 837 EDFKALILEYMRNG-SLEKCLYSG-NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD-------NMV 907 (1057)
Q Consensus 837 ~~~~~lV~E~~~~g-sL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~-------~~~ 907 (1057)
....++|+|++++. +|.+++... ....+...+..++.++++.++-|| ..||+|+|++++|||++. ++.
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEeccccCCCCCce
Confidence 23568999999986 898887532 233566777899999999999999 999999999999999975 568
Q ss_pred EEEEccccccc
Q 001544 908 AHLSDFGIAKL 918 (1057)
Q Consensus 908 ~kl~Dfg~a~~ 918 (1057)
+.++||+.+..
T Consensus 184 ~~LIDl~r~~~ 194 (268)
T PRK15123 184 LSVIDLHRAQI 194 (268)
T ss_pred EEEEECCcccc
Confidence 99999998753
No 489
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.80 E-value=3.4e-09 Score=78.39 Aligned_cols=41 Identities=41% Similarity=0.917 Sum_probs=29.7
Q ss_pred cchHHHHHHHHHhcccCCCCcccCCCCCCC-CCCcccceeEec
Q 001544 26 DIDQDALLALKDHITYDPTNFFAKNWLTNS-TMVCNWTGVTCD 67 (1057)
Q Consensus 26 ~~d~~~l~~~k~~~~~~~~~~~~~~w~~~~-~~~c~w~gv~c~ 67 (1057)
+.|++||++||+++..+|.+.+ .+|..++ ++||.|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l-~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVL-SSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCC-TT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCccc-ccCCCcCCCCCeeeccEEeC
Confidence 5689999999999986776666 5997754 799999999996
No 490
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.76 E-value=5e-09 Score=84.94 Aligned_cols=60 Identities=40% Similarity=0.580 Sum_probs=34.6
Q ss_pred ccceeccccccccccccccccCccccceecccccccccccCccccccCccceecccCccc
Q 001544 583 ALTTLDFSMNNLSGVIPTTIGGLKGLQYLFLGHNRLQGSIPDSVGDLISLKSLNLSNNNL 642 (1057)
Q Consensus 583 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 642 (1057)
+|++|++++|+|+...+..|.++++|++|++++|+++...|..|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 455556666666555445555556666666666665555555555566666666655553
No 491
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.75 E-value=4.2e-07 Score=100.32 Aligned_cols=166 Identities=17% Similarity=0.200 Sum_probs=125.3
Q ss_pred CeEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHHHhcCCCCceeEeeeecc----CCeeEEEEEEccC-CChhHH
Q 001544 782 FGSVYIARL-QNGIEVAVKTFDLQHERAFKSFDTECEVMKSIRHRNLTKIISSCSN----EDFKALILEYMRN-GSLEKC 855 (1057)
Q Consensus 782 ~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lV~E~~~~-gsL~~~ 855 (1057)
-.+.||+.- -||..|++|+++............-++.++++.|+|+|++.+.+.. +-..++||+|.++ ++|.+.
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 457899964 4899999999955433322223456788999999999999998752 4467899999876 467664
Q ss_pred HhcC--------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCcEEEEcccccccccC
Q 001544 856 LYSG--------------NYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIG 921 (1057)
Q Consensus 856 l~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 921 (1057)
.... ....++...+.++.|+..||.++| +.|..-+-+.+.+|+++.+.+++|+.-|....+..
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH---hcCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 3221 134677889999999999999999 99999999999999999999999998887765532
Q ss_pred CCCccccccccccccccCccccCCCCCCccchHHHHHHHHHHHhhCCC
Q 001544 922 EDQSMTQTQTLATLGYMAPEYGREGRVSTKGDVYSFGILLMETFTRRK 969 (1057)
Q Consensus 922 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~ 969 (1057)
+.. |.+. --.+-|.=.+|.+++.+.||..
T Consensus 446 d~~----------------~~le---~~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 446 DPT----------------EPLE---SQQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred CCC----------------cchh---HHhhhhHHHHHHHHHHHhhccc
Confidence 220 1111 1235688999999999999965
No 492
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.73 E-value=8.2e-08 Score=98.45 Aligned_cols=134 Identities=22% Similarity=0.252 Sum_probs=100.2
Q ss_pred CCCceeccccCeEEEEEEecCCcEEEEEEeeccc----------------------hhHHHHHHHHHHHHHhcCCC--Cc
Q 001544 772 SENNLIGRGSFGSVYIARLQNGIEVAVKTFDLQH----------------------ERAFKSFDTECEVMKSIRHR--NL 827 (1057)
Q Consensus 772 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----------------------~~~~~~~~~E~~~l~~l~h~--ni 827 (1057)
.+...||.|.-+.||.|..+.|.++|||.=+... ..+....++|.++|.++... .+
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V 173 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV 173 (304)
T ss_pred hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence 4568899999999999999999999999632110 11234678899999999644 56
Q ss_pred eeEeeeeccCCeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc
Q 001544 828 TKIISSCSNEDFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMV 907 (1057)
Q Consensus 828 v~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 907 (1057)
.+.+++ +...+||||++|-.|... +++......|+..|++-+.-.- ..||||||+.+-||+++++|.
T Consensus 174 P~P~~~----nRHaVvMe~ieG~eL~~~------r~~~en~~~il~~il~~~~~~~---~~GiVHGDlSefNIlV~~dg~ 240 (304)
T COG0478 174 PKPIAW----NRHAVVMEYIEGVELYRL------RLDVENPDEILDKILEEVRKAY---RRGIVHGDLSEFNILVTEDGD 240 (304)
T ss_pred CCcccc----ccceeeeehcccceeecc------cCcccCHHHHHHHHHHHHHHHH---HcCccccCCchheEEEecCCC
Confidence 665554 345799999999666542 1234445556666666666555 688999999999999999999
Q ss_pred EEEEccccccc
Q 001544 908 AHLSDFGIAKL 918 (1057)
Q Consensus 908 ~kl~Dfg~a~~ 918 (1057)
+.++||-.+..
T Consensus 241 ~~vIDwPQ~v~ 251 (304)
T COG0478 241 IVVIDWPQAVP 251 (304)
T ss_pred EEEEeCccccc
Confidence 99999976653
No 493
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.70 E-value=9.6e-09 Score=83.28 Aligned_cols=59 Identities=36% Similarity=0.517 Sum_probs=28.6
Q ss_pred CCcEEEccCCcCCCCCCcccccccccceeecccccCcccCCcccccccccceEEecCee
Q 001544 463 NLVTLDLGGNKFNGSIPIALGKLQKLQLLNLDDNKLEGSIPDDICGLVELYKLALGDNK 521 (1057)
Q Consensus 463 ~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 521 (1057)
+|++|++++|+|+...+.+|.++++|++|++++|+++...|..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34455555555554444445555555555555555544444444444444444444443
No 494
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.64 E-value=1.6e-07 Score=108.71 Aligned_cols=140 Identities=21% Similarity=0.180 Sum_probs=96.4
Q ss_pred ceeccccCeEEEEEEecCCcEEEEEEeeccchhH----------------------------------------HHHHHH
Q 001544 775 NLIGRGSFGSVYIARLQNGIEVAVKTFDLQHERA----------------------------------------FKSFDT 814 (1057)
Q Consensus 775 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----------------------------------------~~~~~~ 814 (1057)
+.|+.++-|.||+|++++|+.||||+.++..... .-++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 7899999999999999999999999986442110 013444
Q ss_pred HHHHHHhcC-----CCCceeEeeeeccCCeeEEEEEEccCCChhHHHhcCCccCCHHHHHHHHHHHHHH-HHHHHhCCCC
Q 001544 815 ECEVMKSIR-----HRNLTKIISSCSNEDFKALILEYMRNGSLEKCLYSGNYILDIFQRLNIMIDVASA-LEYLHFGYSA 888 (1057)
Q Consensus 815 E~~~l~~l~-----h~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~-L~~LH~~~~~ 888 (1057)
|..-+.+++ .|.+.--.=|++-.....++|||++|..+.+...-.....+.+ .++..++++ +..+= ..
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k---~ia~~~~~~f~~q~~---~d 284 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRK---ELAELLVRAFLRQLL---RD 284 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHH---HHHHHHHHHHHHHHH---hc
Confidence 555555553 3333322233444567789999999999988743333335533 333333333 22222 56
Q ss_pred CeEEccCCCCCeeeCCCCcEEEEccccccccc
Q 001544 889 PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLI 920 (1057)
Q Consensus 889 ~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 920 (1057)
|+.|.|..|.||+++.+|.+.+.|||+...+.
T Consensus 285 gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 285 GFFHADPHPGNILVRSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred CccccCCCccceEEecCCcEEEEcCcceecCC
Confidence 89999999999999999999999999998764
No 495
>PRK09902 hypothetical protein; Provisional
Probab=98.59 E-value=4.7e-07 Score=91.30 Aligned_cols=137 Identities=18% Similarity=0.099 Sum_probs=104.2
Q ss_pred eccccCeEEEEEEecCCcEEEEEEeeccc------hhHHHHHHHHHHHHHhcCCC--CceeEeeeecc-----CCeeEEE
Q 001544 777 IGRGSFGSVYIARLQNGIEVAVKTFDLQH------ERAFKSFDTECEVMKSIRHR--NLTKIISSCSN-----EDFKALI 843 (1057)
Q Consensus 777 lg~G~~g~Vy~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~-----~~~~~lV 843 (1057)
-|+||.+.|++...+ |..+-+|+-.... +-....|.+|+..+.++... .+.+.+ ++.. ....+||
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 477999999998776 4578899864211 22456899999999998532 244444 3321 2345799
Q ss_pred EEEccC-CChhHHHhcCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEccCCCCCeeeCCCCc--EEEEccccccc
Q 001544 844 LEYMRN-GSLEKCLYSGN-YILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMV--AHLSDFGIAKL 918 (1057)
Q Consensus 844 ~E~~~~-gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~--~kl~Dfg~a~~ 918 (1057)
+|-+++ -+|.+++.... .+.+..++..+..++++.++-|| +.|+.|+|+.+.||+++.++. ++++||.-++.
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH---~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMH---SVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 998764 48988886543 35678888999999999999999 999999999999999986666 99999987764
No 496
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.57 E-value=2.1e-09 Score=121.50 Aligned_cols=128 Identities=31% Similarity=0.283 Sum_probs=95.5
Q ss_pred cccccccCCccccccccccccccccccEEEeccccccCCCchhhccccccceeccccccccccccccccCccccceeccc
Q 001544 535 SLRELWLGPNELISFIPSTFWNIKDIMYVNFSSNFLTGPLPLEIENLKALTTLDFSMNNLSGVIPTTIGGLKGLQYLFLG 614 (1057)
Q Consensus 535 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 614 (1057)
.|...+.+.|++... ...+.-++.++.|||++|+++.. +.+..++.|++|||+.|.++.+.--...+++ |+.|+++
T Consensus 165 ~L~~a~fsyN~L~~m-D~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLVLM-DESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHHhH-HHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-heeeeec
Confidence 455566666666543 23455567777888888888753 3677889999999999999855444445555 9999999
Q ss_pred ccccccccCccccccCccceecccCccccCCCc-ccccCcccccccccCCCcccC
Q 001544 615 HNRLQGSIPDSVGDLISLKSLNLSNNNLSGPIP-TSLEKLSDLKELNLSFNKLEG 668 (1057)
Q Consensus 615 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~l~ls~N~l~~ 668 (1057)
+|.++ .+ ..+.+|++|+.||||+|-|++.-. ..+..|..|+.|+|.||++.+
T Consensus 241 nN~l~-tL-~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 241 NNALT-TL-RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred ccHHH-hh-hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 99998 33 347899999999999999986432 235678889999999999976
No 497
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.55 E-value=8.5e-09 Score=93.24 Aligned_cols=115 Identities=22% Similarity=0.213 Sum_probs=80.0
Q ss_pred ccccccEEEeccccccCCCchhhccccccceeccccccccccccccccCccccceecccccccccccCccccccCcccee
Q 001544 556 NIKDIMYVNFSSNFLTGPLPLEIENLKALTTLDFSMNNLSGVIPTTIGGLKGLQYLFLGHNRLQGSIPDSVGDLISLKSL 635 (1057)
Q Consensus 556 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 635 (1057)
....|+.++|++|.+....+..-...+.+++|+|++|.|+ .+|+.+..++.|+.|+++.|.+. ..|..+..|.+|-.|
T Consensus 51 ~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~L 128 (177)
T KOG4579|consen 51 KGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDML 128 (177)
T ss_pred CCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHh
Confidence 3445666777777777543333344557788888888887 56777888888888888888887 677777778888888
Q ss_pred cccCccccCCCcccccCcccccccccCCCcccCcCCCC
Q 001544 636 NLSNNNLSGPIPTSLEKLSDLKELNLSFNKLEGEIPRG 673 (1057)
Q Consensus 636 ~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~ 673 (1057)
|..+|.+- ++|-.+-.-+.....++.+|+|.+.-|.+
T Consensus 129 ds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~k 165 (177)
T KOG4579|consen 129 DSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKKK 165 (177)
T ss_pred cCCCCccc-cCcHHHhccccHHHHHhcCCcccccCccc
Confidence 88888876 55544444444455666777777776654
No 498
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.51 E-value=3.3e-09 Score=108.10 Aligned_cols=179 Identities=27% Similarity=0.237 Sum_probs=97.7
Q ss_pred CCcEEeCCCCCcccc-CCcccccccccceeecccccccCCCCccccccCCCCeEeccCC-CCCCCCCcccccCCCCCcee
Q 001544 96 SLEILDLNFNRLSGE-IPWELGNLAKLEKLLLHNNFLTGTIPFSIFKLSSLLDLKLSDN-NLTGTIPSHNLGNLSSLQLL 173 (1057)
Q Consensus 96 ~L~~L~L~~n~l~~~-~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n-~l~~~~p~~~l~~l~~L~~L 173 (1057)
.|++||||...|+.. +-.-+..+.+|+.|.|.++++...+-..+++-.+|+.|+|+.+ .++..-..-.+.+++.|..|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 477778777777532 3444666777777788888777777777777777777777765 33321112235667777777
Q ss_pred EccCCcccccCchhh-hcc-ccCCeeEeeccCCccccCccccCCCCcccEEEeeccccccCccccccCCCCCcEEEccCC
Q 001544 174 DLSDNQLSGSIPSFI-FKI-SSLQALHFGNNRLSGELPANICDNLPFLNFFSVYKNMFYGGISSTLSNCKHLRILDLSFN 251 (1057)
Q Consensus 174 ~Ls~n~l~~~~p~~l-~~l-~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~Ls~N 251 (1057)
+|+.|.+....-..+ ... ++|+.|+|++.+= |-....+..-.+.+++|..||||.|
T Consensus 266 NlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rr----------------------nl~~sh~~tL~~rcp~l~~LDLSD~ 323 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHISETLTQLNLSGYRR----------------------NLQKSHLSTLVRRCPNLVHLDLSDS 323 (419)
T ss_pred CchHhhccchhhhHHHhhhchhhhhhhhhhhHh----------------------hhhhhHHHHHHHhCCceeeeccccc
Confidence 777776653322221 111 2455555554431 1111112223356667777777765
Q ss_pred C-CcCCccccccCcCCCcEEeeeccccccccCc---cccccccccEEEeec
Q 001544 252 D-LWGDIPKEIGNLTKLKELFLDFNILQGEIPH---TVGNLHNLEYLSLVN 298 (1057)
Q Consensus 252 ~-l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~---~~~~l~~L~~L~L~~ 298 (1057)
. ++......|..++.|++|.|+.|.. .+|. .+...+.|.+||+-+
T Consensus 324 v~l~~~~~~~~~kf~~L~~lSlsRCY~--i~p~~~~~l~s~psl~yLdv~g 372 (419)
T KOG2120|consen 324 VMLKNDCFQEFFKFNYLQHLSLSRCYD--IIPETLLELNSKPSLVYLDVFG 372 (419)
T ss_pred cccCchHHHHHHhcchheeeehhhhcC--CChHHeeeeccCcceEEEEecc
Confidence 3 3333333444555556555555543 2333 233445555555443
No 499
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.50 E-value=4.9e-09 Score=118.59 Aligned_cols=127 Identities=27% Similarity=0.238 Sum_probs=68.4
Q ss_pred CCcEEeeeccccccccCccccccccccEEEeecCccccccCccccccccccEEEecCCccccCCCCCcccCCCCCceEEe
Q 001544 266 KLKELFLDFNILQGEIPHTVGNLHNLEYLSLVNNELVGTVPATIFNVSTLKLIELSNNTFFGSLPSSTDVQLPNLEELYL 345 (1057)
Q Consensus 266 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L 345 (1057)
+|...+.++|.++ .+..++.-++.|+.|||++|+++... .+..++.|++|||++|.+. .+|...-.+.. |..|.+
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhhh-heeeee
Confidence 4555566666665 44455555666666666666665322 4555666666666666664 34432222222 566666
Q ss_pred cCccccccCCccccccccccccccccccccccc-cchhcccccccEEeccCcccC
Q 001544 346 WGNNFSGTLPSFIFNASNLSKLSLGDNSFSGLI-PNTFGNLRNLKRLRLYNNYLT 399 (1057)
Q Consensus 346 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~ 399 (1057)
++|.++.. ..+.++.+|+.||+++|-|.+-- -..++.+..|+.|+|.+|++-
T Consensus 240 rnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 240 RNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred cccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 66665532 33455566666666666555321 122445555666666666554
No 500
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.48 E-value=8.6e-09 Score=103.71 Aligned_cols=256 Identities=21% Similarity=0.167 Sum_probs=118.7
Q ss_pred ccCCCCCcEEeCCCCCcccc----CCcccccccccceeecccccc---cCCCCccccccCCCCeEeccCCCCCCCCCccc
Q 001544 91 LGNLSSLEILDLNFNRLSGE----IPWELGNLAKLEKLLLHNNFL---TGTIPFSIFKLSSLLDLKLSDNNLTGTIPSHN 163 (1057)
Q Consensus 91 l~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~L~~n~l---~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~ 163 (1057)
+..+..++.+|||+|.|..+ +...+.+-.+|+..+++.-.. ...+|+++.-| .| +
T Consensus 26 l~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~L----------------l~--a 87 (388)
T COG5238 26 LEMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVML----------------LK--A 87 (388)
T ss_pred HHhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHH----------------HH--H
Confidence 44567778888888888644 445556667777777766322 12223222111 11 3
Q ss_pred ccCCCCCceeEccCCcccccCchh----hhccccCCeeEeeccCCccccCccccCCCCcccEEEeeccccccCccccccC
Q 001544 164 LGNLSSLQLLDLSDNQLSGSIPSF----IFKISSLQALHFGNNRLSGELPANICDNLPFLNFFSVYKNMFYGGISSTLSN 239 (1057)
Q Consensus 164 l~~l~~L~~L~Ls~n~l~~~~p~~----l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~ 239 (1057)
+-++|+|+..+||.|.+....|.. +++-+.|++|.|++|.+...-...+...|.+|-+ ..-.++
T Consensus 88 Llkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~------------nKKaa~ 155 (388)
T COG5238 88 LLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAY------------NKKAAD 155 (388)
T ss_pred HhcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHH------------Hhhhcc
Confidence 455666666666666665544433 3445667777777776642212222211111000 001122
Q ss_pred CCCCcEEEccCCCCcCCcc----ccccCcCCCcEEeeeccccccccC-----ccccccccccEEEeecCccccc----cC
Q 001544 240 CKHLRILDLSFNDLWGDIP----KEIGNLTKLKELFLDFNILQGEIP-----HTVGNLHNLEYLSLVNNELVGT----VP 306 (1057)
Q Consensus 240 l~~L~~L~Ls~N~l~~~~p----~~l~~l~~L~~L~L~~N~l~~~~p-----~~~~~l~~L~~L~L~~N~l~~~----~~ 306 (1057)
-+.|++.....|++..-.. ..+..-..|+++.+..|.|....- ..+..+++|+.|||..|-++-. +.
T Consensus 156 kp~Le~vicgrNRlengs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La 235 (388)
T COG5238 156 KPKLEVVICGRNRLENGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLA 235 (388)
T ss_pred CCCceEEEeccchhccCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHH
Confidence 3344444444444431110 111112344444444444431100 0112234555555555554421 11
Q ss_pred ccccccccccEEEecCCccccCCCCCcc-----cCCCCCceEEecCccccccCCcc-------ccccccccccccccccc
Q 001544 307 ATIFNVSTLKLIELSNNTFFGSLPSSTD-----VQLPNLEELYLWGNNFSGTLPSF-------IFNASNLSKLSLGDNSF 374 (1057)
Q Consensus 307 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~~~~-------~~~l~~L~~L~L~~N~l 374 (1057)
..+..++.|+.|.+.+|-++..-...++ ...|+|..|-..+|.+.+.+-.. -..++-|..|.+.+|+|
T Consensus 236 ~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr~ 315 (388)
T COG5238 236 DALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGNRI 315 (388)
T ss_pred HHhcccchhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHccCcc
Confidence 2233344455555555544321111110 12466666666666655322111 12467788888888888
Q ss_pred cc
Q 001544 375 SG 376 (1057)
Q Consensus 375 ~~ 376 (1057)
..
T Consensus 316 ~E 317 (388)
T COG5238 316 KE 317 (388)
T ss_pred hh
Confidence 74
Done!