Query 001548
Match_columns 1056
No_of_seqs 827 out of 5366
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 03:32:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001548.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001548hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00181 protein SPA1-RELATED; 100.0 1.5E-72 3.3E-77 712.8 66.9 658 305-1049 56-740 (793)
2 KOG0286 G-protein beta subunit 100.0 8.6E-39 1.9E-43 331.0 34.7 292 723-1045 48-343 (343)
3 KOG0272 U4/U6 small nuclear ri 100.0 3.2E-40 6.9E-45 356.1 23.6 277 732-1045 177-458 (459)
4 KOG0271 Notchless-like WD40 re 100.0 5.7E-39 1.2E-43 341.6 23.9 294 714-1045 141-479 (480)
5 KOG0271 Notchless-like WD40 re 100.0 1.4E-38 3.1E-43 338.6 25.5 299 722-1054 107-446 (480)
6 KOG0272 U4/U6 small nuclear ri 100.0 3.2E-37 6.9E-42 333.0 20.2 247 777-1052 173-423 (459)
7 KOG0615 Serine/threonine prote 100.0 1.2E-38 2.6E-43 346.3 7.3 264 208-592 168-447 (475)
8 KOG0286 G-protein beta subunit 100.0 4.1E-36 9E-41 311.1 22.8 286 684-984 43-343 (343)
9 KOG0581 Mitogen-activated prot 100.0 1.3E-36 2.8E-41 329.3 13.8 206 263-590 128-343 (364)
10 KOG0661 MAPK related serine/th 100.0 1.7E-36 3.7E-41 334.6 14.2 255 213-591 11-300 (538)
11 KOG0663 Protein kinase PITSLRE 100.0 3.6E-36 7.8E-41 318.8 15.1 264 209-600 73-379 (419)
12 KOG0593 Predicted protein kina 100.0 4.2E-36 9.2E-41 314.3 13.6 244 217-589 9-291 (396)
13 KOG0279 G protein beta subunit 100.0 3.4E-33 7.4E-38 288.2 30.7 296 722-1047 7-313 (315)
14 KOG0659 Cdk activating kinase 100.0 2.7E-35 5.8E-40 304.1 14.9 251 222-597 14-296 (318)
15 KOG0591 NIMA (never in mitosis 100.0 1.3E-34 2.8E-39 300.4 17.6 242 210-576 17-275 (375)
16 KOG0600 Cdc2-related protein k 100.0 6.8E-35 1.5E-39 324.3 15.2 250 217-593 124-411 (560)
17 KOG0575 Polo-like serine/threo 100.0 7.3E-35 1.6E-39 332.1 13.6 258 203-588 10-275 (592)
18 KOG0660 Mitogen-activated prot 100.0 1.1E-34 2.5E-39 312.9 13.7 255 222-595 34-323 (359)
19 KOG4721 Serine/threonine prote 100.0 2.7E-34 5.8E-39 320.1 16.7 228 221-583 135-365 (904)
20 KOG0583 Serine/threonine prote 100.0 2.7E-34 5.9E-39 329.2 16.0 255 210-587 15-280 (370)
21 KOG0595 Serine/threonine-prote 100.0 1.5E-34 3.2E-39 315.4 13.0 255 211-589 9-275 (429)
22 KOG0295 WD40 repeat-containing 100.0 1.4E-32 3.1E-37 292.2 27.3 289 721-1046 99-405 (406)
23 KOG0588 Serine/threonine prote 100.0 3.6E-34 7.8E-39 326.5 14.9 263 203-593 3-274 (786)
24 KOG0594 Protein kinase PCTAIRE 100.0 5.1E-34 1.1E-38 309.3 14.8 247 222-592 23-312 (323)
25 KOG0315 G-protein beta subunit 100.0 1.4E-31 3.1E-36 271.7 29.6 271 748-1051 14-292 (311)
26 KOG0598 Ribosomal protein S6 k 100.0 8.2E-34 1.8E-38 307.5 12.4 256 209-590 22-289 (357)
27 KOG0263 Transcription initiati 100.0 1.9E-32 4.2E-37 316.8 24.0 249 777-1048 376-650 (707)
28 KOG0198 MEKK and related serin 100.0 1.3E-33 2.8E-38 311.5 13.7 214 263-590 65-284 (313)
29 KOG0597 Serine-threonine prote 100.0 1.9E-33 4.1E-38 314.0 14.3 245 220-590 12-259 (808)
30 KOG0285 Pleiotropic regulator 100.0 1.3E-31 2.9E-36 283.4 27.5 312 705-1047 127-439 (460)
31 KOG1033 eIF-2alpha kinase PEK/ 100.0 6.7E-34 1.4E-38 320.6 10.7 466 4-585 1-515 (516)
32 KOG0284 Polyadenylation factor 100.0 7.2E-33 1.6E-37 297.9 16.3 270 742-1046 104-379 (464)
33 KOG0610 Putative serine/threon 100.0 7.5E-33 1.6E-37 301.8 16.5 314 210-593 75-403 (459)
34 KOG0592 3-phosphoinositide-dep 100.0 7.5E-33 1.6E-37 310.3 15.9 219 264-592 126-348 (604)
35 KOG0192 Tyrosine kinase specif 100.0 1.4E-32 3.1E-37 312.3 17.5 242 218-582 49-299 (362)
36 KOG0313 Microtubule binding pr 100.0 7.2E-31 1.6E-35 280.6 28.0 284 728-1047 103-418 (423)
37 KOG0273 Beta-transducin family 100.0 7.3E-31 1.6E-35 286.9 28.0 295 722-1053 171-488 (524)
38 KOG0265 U5 snRNP-specific prot 100.0 5.9E-31 1.3E-35 274.1 25.0 255 774-1050 42-299 (338)
39 KOG0578 p21-activated serine/t 100.0 9E-33 1.9E-37 312.8 12.4 253 207-587 270-528 (550)
40 KOG0658 Glycogen synthase kina 100.0 7.1E-33 1.5E-37 299.5 10.6 249 219-592 33-316 (364)
41 KOG0263 Transcription initiati 100.0 1.3E-30 2.8E-35 301.7 29.7 258 747-1015 393-694 (707)
42 KOG0605 NDR and related serine 100.0 1.7E-32 3.8E-37 308.0 12.7 231 305-593 218-456 (550)
43 KOG0033 Ca2+/calmodulin-depend 100.0 1.9E-32 4.1E-37 278.9 11.2 205 263-588 61-273 (355)
44 KOG0277 Peroxisomal targeting 100.0 6.1E-31 1.3E-35 268.0 21.9 268 753-1046 37-308 (311)
45 KOG0281 Beta-TrCP (transducin 100.0 1.2E-31 2.5E-36 282.3 16.7 276 732-1049 199-479 (499)
46 KOG0616 cAMP-dependent protein 100.0 2.3E-32 5E-37 286.3 10.8 250 209-589 41-304 (355)
47 KOG0279 G protein beta subunit 100.0 9.2E-30 2E-34 262.9 28.6 255 772-1053 8-268 (315)
48 KOG0611 Predicted serine/threo 100.0 9.7E-32 2.1E-36 289.4 14.5 250 213-588 54-309 (668)
49 KOG0585 Ca2+/calmodulin-depend 100.0 9.9E-32 2.1E-36 296.4 12.9 213 263-588 159-378 (576)
50 KOG0599 Phosphorylase kinase g 100.0 1.4E-31 3.1E-36 276.0 12.2 202 270-592 81-293 (411)
51 KOG0319 WD40-repeat-containing 100.0 9.2E-30 2E-34 291.2 26.6 292 723-1048 316-620 (775)
52 KOG0032 Ca2+/calmodulin-depend 100.0 1.6E-30 3.4E-35 298.0 20.5 253 213-589 36-300 (382)
53 KOG0604 MAP kinase-activated p 100.0 2.2E-31 4.8E-36 278.4 12.0 212 265-592 108-332 (400)
54 cd07871 STKc_PCTAIRE3 Catalyti 100.0 6.8E-31 1.5E-35 293.9 15.3 204 262-585 53-288 (288)
55 cd05571 STKc_PKB Catalytic dom 100.0 6.4E-31 1.4E-35 299.2 12.9 205 262-588 45-257 (323)
56 cd00200 WD40 WD40 domain, foun 100.0 1.2E-27 2.6E-32 260.5 36.9 285 724-1045 3-289 (289)
57 KOG0582 Ste20-like serine/thre 100.0 4.8E-30 1E-34 281.8 17.9 213 264-591 76-302 (516)
58 KOG1035 eIF-2alpha kinase GCN2 100.0 2.9E-30 6.2E-35 311.3 16.9 198 305-587 673-876 (1351)
59 cd07862 STKc_CDK6 Catalytic do 100.0 4.6E-30 1E-34 286.8 17.0 211 259-585 51-290 (290)
60 PTZ00283 serine/threonine prot 100.0 1.1E-29 2.4E-34 304.7 21.2 261 214-589 34-304 (496)
61 KOG0291 WD40-repeat-containing 100.0 6.1E-28 1.3E-32 276.0 34.0 284 732-1052 267-555 (893)
62 KOG0285 Pleiotropic regulator 100.0 3.1E-29 6.8E-34 265.5 21.8 245 774-1050 146-392 (460)
63 cd05585 STKc_YPK1_like Catalyt 100.0 1.9E-30 4.1E-35 293.8 13.4 205 262-588 43-253 (312)
64 PTZ00263 protein kinase A cata 100.0 1.2E-30 2.6E-35 297.8 11.6 250 210-588 16-277 (329)
65 KOG0589 Serine/threonine prote 100.0 2E-30 4.3E-35 292.9 13.2 206 263-588 54-264 (426)
66 KOG0266 WD40 repeat-containing 100.0 2.6E-28 5.6E-33 289.5 31.9 285 730-1048 159-455 (456)
67 KOG0295 WD40 repeat-containing 100.0 4.8E-29 1.1E-33 265.4 22.0 251 774-1054 103-371 (406)
68 KOG0201 Serine/threonine prote 100.0 5.2E-31 1.1E-35 289.6 7.0 180 303-587 86-268 (467)
69 cd07859 STKc_TDY_MAPK_plant Ca 100.0 9.8E-30 2.1E-34 290.7 17.3 217 262-591 49-299 (338)
70 KOG0694 Serine/threonine prote 100.0 1.3E-30 2.8E-35 300.3 10.0 180 304-590 445-632 (694)
71 KOG0662 Cyclin-dependent kinas 100.0 2.8E-30 6.1E-35 251.7 10.6 241 221-588 13-289 (292)
72 cd07869 STKc_PFTAIRE1 Catalyti 100.0 5.8E-30 1.3E-34 288.4 14.9 207 263-589 54-295 (303)
73 cd05595 STKc_PKB_beta Catalyti 100.0 5.2E-30 1.1E-34 291.8 14.4 203 263-588 46-257 (323)
74 KOG0666 Cyclin C-dependent kin 100.0 3E-30 6.5E-35 270.9 11.3 250 223-591 37-346 (438)
75 PHA03212 serine/threonine kina 100.0 6.6E-30 1.4E-34 298.2 15.2 210 263-592 134-386 (391)
76 PTZ00036 glycogen synthase kin 100.0 1.8E-29 3.9E-34 299.1 18.9 217 262-591 109-360 (440)
77 PTZ00267 NIMA-related protein 100.0 1.6E-29 3.4E-34 302.9 18.5 253 214-588 69-329 (478)
78 KOG0276 Vesicle coat complex C 100.0 1.4E-28 3.1E-33 275.7 24.4 247 775-1050 9-260 (794)
79 cd05612 STKc_PRKX_like Catalyt 100.0 4.8E-30 1E-34 287.6 12.7 202 263-589 52-261 (291)
80 cd05631 STKc_GRK4 Catalytic do 100.0 5.8E-30 1.3E-34 285.9 13.2 208 262-590 50-269 (285)
81 cd05593 STKc_PKB_gamma Catalyt 100.0 7.1E-30 1.5E-34 291.3 14.0 204 263-588 46-257 (328)
82 PTZ00426 cAMP-dependent protei 100.0 5.5E-30 1.2E-34 293.6 12.7 202 263-589 82-291 (340)
83 cd07863 STKc_CDK4 Catalytic do 100.0 1.5E-29 3.3E-34 282.2 15.4 248 221-585 11-288 (288)
84 KOG0296 Angio-associated migra 100.0 1.8E-27 4E-32 253.7 30.2 286 723-1047 57-398 (399)
85 cd05590 STKc_nPKC_eta Catalyti 100.0 8.5E-30 1.8E-34 289.7 13.4 198 269-588 53-259 (320)
86 KOG0579 Ste20-like serine/thre 100.0 1.1E-29 2.3E-34 285.5 13.7 205 264-588 81-295 (1187)
87 cd05584 STKc_p70S6K Catalytic 100.0 1.1E-29 2.4E-34 289.1 14.0 204 263-588 51-262 (323)
88 KOG4279 Serine/threonine prote 100.0 3.4E-30 7.4E-35 292.2 8.8 241 224-588 589-838 (1226)
89 cd05594 STKc_PKB_alpha Catalyt 100.0 6.3E-30 1.4E-34 291.3 11.2 205 262-588 45-258 (325)
90 cd05591 STKc_nPKC_epsilon Cata 100.0 1.3E-29 2.9E-34 288.1 13.4 199 268-588 52-260 (321)
91 cd05620 STKc_nPKC_delta Cataly 100.0 1.7E-29 3.8E-34 286.6 14.0 199 268-588 52-254 (316)
92 cd05102 PTKc_VEGFR3 Catalytic 100.0 3.6E-29 7.8E-34 286.5 16.7 155 326-581 171-329 (338)
93 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.2E-29 2.6E-34 291.7 12.7 234 263-588 52-291 (350)
94 cd05592 STKc_nPKC_theta_delta 100.0 2.1E-29 4.6E-34 285.9 14.6 200 267-588 51-254 (316)
95 cd07868 STKc_CDK8 Catalytic do 100.0 3.2E-29 7E-34 284.0 16.0 249 217-585 8-317 (317)
96 cd05588 STKc_aPKC Catalytic do 100.0 1.5E-29 3.2E-34 288.9 13.2 198 270-588 54-268 (329)
97 cd05628 STKc_NDR1 Catalytic do 100.0 3E-29 6.4E-34 290.3 15.8 239 263-588 52-299 (363)
98 KOG0264 Nucleosome remodeling 100.0 7.5E-28 1.6E-32 263.9 25.7 261 776-1047 121-404 (422)
99 PHA03209 serine/threonine kina 100.0 3.4E-29 7.3E-34 289.2 16.1 204 263-587 108-356 (357)
100 cd05619 STKc_nPKC_theta Cataly 100.0 2.3E-29 4.9E-34 285.7 14.0 199 268-588 52-254 (316)
101 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.9E-29 4.1E-34 288.3 13.5 203 263-588 52-263 (333)
102 KOG0266 WD40 repeat-containing 100.0 2.4E-27 5.1E-32 281.3 31.8 252 777-1052 157-414 (456)
103 KOG0273 Beta-transducin family 100.0 3.3E-27 7.2E-32 258.4 30.2 275 733-1046 238-522 (524)
104 cd07848 STKc_CDKL5 Catalytic d 100.0 3.3E-29 7.3E-34 279.5 15.0 204 263-585 51-287 (287)
105 cd05575 STKc_SGK Catalytic dom 100.0 1.7E-29 3.7E-34 287.5 12.7 202 265-588 49-257 (323)
106 cd05626 STKc_LATS2 Catalytic d 100.0 2.1E-29 4.5E-34 293.5 13.7 253 263-588 52-311 (381)
107 KOG0284 Polyadenylation factor 100.0 2.4E-29 5.2E-34 270.8 13.0 249 723-987 131-381 (464)
108 PLN00034 mitogen-activated pro 100.0 4E-29 8.6E-34 288.1 15.8 251 210-589 72-335 (353)
109 cd05618 STKc_aPKC_iota Catalyt 100.0 2E-29 4.4E-34 287.7 13.0 200 268-588 52-268 (329)
110 PHA03211 serine/threonine kina 100.0 2.1E-29 4.4E-34 298.3 13.1 245 214-587 171-460 (461)
111 cd05608 STKc_GRK1 Catalytic do 100.0 4.4E-29 9.5E-34 278.1 15.0 207 263-589 44-264 (280)
112 KOG0282 mRNA splicing factor [ 100.0 1.1E-28 2.3E-33 271.3 17.6 289 722-1045 206-503 (503)
113 PLN00181 protein SPA1-RELATED; 100.0 1.4E-26 3.1E-31 293.8 39.8 300 726-1046 479-792 (793)
114 cd05625 STKc_LATS1 Catalytic d 100.0 2E-29 4.3E-34 293.8 12.5 252 263-588 52-311 (382)
115 cd06649 PKc_MEK2 Catalytic dom 100.0 7.7E-29 1.7E-33 283.1 17.1 204 263-588 54-307 (331)
116 cd07872 STKc_PCTAIRE2 Catalyti 100.0 6.2E-29 1.4E-33 280.8 16.1 207 263-589 55-293 (309)
117 KOG0645 WD40 repeat protein [G 100.0 9.7E-27 2.1E-31 239.7 30.5 291 723-1047 7-311 (312)
118 cd05599 STKc_NDR_like Catalyti 100.0 4.9E-29 1.1E-33 288.4 15.3 243 263-588 52-302 (364)
119 cd05589 STKc_PKN Catalytic dom 100.0 4.1E-29 9E-34 284.5 14.4 201 265-588 55-263 (324)
120 KOG0318 WD40 repeat stress pro 100.0 1.6E-26 3.4E-31 255.8 33.6 298 723-1051 140-564 (603)
121 KOG0596 Dual specificity; seri 100.0 7.2E-29 1.6E-33 278.0 15.1 252 213-589 362-634 (677)
122 cd05601 STKc_CRIK Catalytic do 100.0 1.5E-29 3.2E-34 288.8 9.9 207 263-588 52-269 (330)
123 cd05614 STKc_MSK2_N N-terminal 100.0 3.4E-29 7.4E-34 286.0 12.9 206 263-588 55-273 (332)
124 cd05587 STKc_cPKC Catalytic do 100.0 5.5E-29 1.2E-33 283.4 14.1 178 305-588 78-263 (324)
125 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.3E-28 2.8E-33 282.6 16.8 211 262-591 64-307 (343)
126 cd05603 STKc_SGK2 Catalytic do 100.0 3.8E-29 8.2E-34 284.4 12.3 202 265-588 49-257 (321)
127 KOG0197 Tyrosine kinases [Sign 100.0 4.7E-29 1E-33 282.5 12.7 234 222-580 218-455 (468)
128 cd05570 STKc_PKC Catalytic dom 100.0 6.1E-29 1.3E-33 282.3 13.6 197 270-588 54-258 (318)
129 cd05602 STKc_SGK1 Catalytic do 100.0 4.3E-29 9.4E-34 284.4 12.4 202 265-588 49-257 (325)
130 KOG0276 Vesicle coat complex C 100.0 3.4E-27 7.3E-32 264.8 27.0 245 727-987 10-258 (794)
131 cd05586 STKc_Sck1_like Catalyt 100.0 2E-29 4.4E-34 287.7 9.6 198 270-588 54-259 (330)
132 cd05596 STKc_ROCK Catalytic do 100.0 5.4E-29 1.2E-33 288.8 13.1 206 263-588 94-310 (370)
133 cd05604 STKc_SGK3 Catalytic do 100.0 3.8E-29 8.3E-34 284.8 11.2 202 265-588 49-257 (325)
134 cd06650 PKc_MEK1 Catalytic dom 100.0 1.9E-28 4E-33 280.3 16.7 204 263-588 54-305 (333)
135 KOG0281 Beta-TrCP (transducin 100.0 8.1E-29 1.7E-33 260.9 12.5 231 778-1049 196-430 (499)
136 KOG4717 Serine/threonine prote 100.0 8.2E-29 1.8E-33 273.5 13.0 206 259-591 67-279 (864)
137 KOG0291 WD40-repeat-containing 100.0 2.9E-26 6.2E-31 262.4 34.1 295 723-1049 182-510 (893)
138 cd07876 STKc_JNK2 Catalytic do 100.0 1.8E-28 3.9E-33 283.3 16.4 210 263-590 71-323 (359)
139 cd05629 STKc_NDR_like_fungal C 100.0 5.1E-29 1.1E-33 289.8 11.9 252 263-588 52-311 (377)
140 KOG0268 Sof1-like rRNA process 100.0 4.3E-28 9.4E-33 257.7 17.6 285 724-1047 60-345 (433)
141 cd05616 STKc_cPKC_beta Catalyt 100.0 8.7E-29 1.9E-33 281.7 13.3 178 305-588 78-263 (323)
142 KOG0265 U5 snRNP-specific prot 100.0 1E-26 2.3E-31 242.5 27.4 289 722-1045 39-336 (338)
143 cd05607 STKc_GRK7 Catalytic do 100.0 1.7E-28 3.7E-33 272.9 15.1 206 263-588 44-260 (277)
144 cd05598 STKc_LATS Catalytic do 100.0 3.8E-29 8.3E-34 290.8 10.2 247 263-588 52-307 (376)
145 KOG0319 WD40-repeat-containing 100.0 4.1E-27 8.8E-32 269.6 26.4 274 746-1054 295-584 (775)
146 cd07875 STKc_JNK1 Catalytic do 100.0 3.2E-28 6.9E-33 281.8 17.7 212 263-592 74-328 (364)
147 cd07874 STKc_JNK3 Catalytic do 100.0 1.8E-28 4E-33 282.7 15.6 212 262-591 66-320 (355)
148 cd05621 STKc_ROCK2 Catalytic d 100.0 1E-28 2.2E-33 286.4 13.4 206 263-588 94-310 (370)
149 KOG0283 WD40 repeat-containing 100.0 3.6E-27 7.7E-32 275.6 26.1 254 773-1048 260-577 (712)
150 cd05617 STKc_aPKC_zeta Catalyt 100.0 9.3E-29 2E-33 282.0 12.3 200 269-589 53-267 (327)
151 cd05582 STKc_RSK_N N-terminal 100.0 5E-29 1.1E-33 283.0 10.0 205 262-588 48-260 (318)
152 cd05627 STKc_NDR2 Catalytic do 100.0 1.1E-28 2.4E-33 285.2 12.9 242 263-590 52-301 (360)
153 cd05108 PTKc_EGFR Catalytic do 100.0 3.7E-28 8E-33 275.5 16.8 201 263-582 60-264 (316)
154 KOG0316 Conserved WD40 repeat- 100.0 5.1E-27 1.1E-31 236.9 22.9 248 774-1053 12-263 (307)
155 KOG0667 Dual-specificity tyros 100.0 1.2E-28 2.5E-33 284.8 12.5 180 306-591 265-511 (586)
156 cd06631 STKc_YSK4 Catalytic do 100.0 3.2E-28 7E-33 268.1 15.4 208 264-585 54-265 (265)
157 PHA03207 serine/threonine kina 100.0 3.1E-28 6.7E-33 284.7 16.0 209 263-590 137-383 (392)
158 cd07867 STKc_CDC2L6 Catalytic 100.0 3.2E-28 6.9E-33 275.6 15.5 248 218-585 9-317 (317)
159 cd06637 STKc_TNIK Catalytic do 100.0 6.1E-28 1.3E-32 266.8 17.3 208 265-585 55-272 (272)
160 cd05048 PTKc_Ror Catalytic Dom 100.0 5.7E-28 1.2E-32 268.9 17.0 251 213-582 6-279 (283)
161 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.9E-28 6.2E-33 274.3 14.7 208 263-590 55-294 (301)
162 PHA02988 hypothetical protein; 100.0 5E-28 1.1E-32 270.3 16.2 238 220-582 30-275 (283)
163 PTZ00284 protein kinase; Provi 100.0 1.8E-28 3.9E-33 293.3 13.1 174 306-588 210-444 (467)
164 cd06643 STKc_SLK Catalytic dom 100.0 8.4E-28 1.8E-32 267.6 17.4 207 263-588 53-268 (282)
165 cd05623 STKc_MRCK_alpha Cataly 100.0 2.6E-28 5.6E-33 278.9 13.0 207 264-588 53-272 (332)
166 KOG0603 Ribosomal protein S6 k 100.0 3.1E-28 6.8E-33 279.7 13.5 195 265-586 369-567 (612)
167 KOG0315 G-protein beta subunit 100.0 4.2E-26 9E-31 232.1 27.3 266 722-1013 32-307 (311)
168 cd05622 STKc_ROCK1 Catalytic d 100.0 3.5E-28 7.7E-33 282.0 14.1 206 263-588 94-310 (371)
169 cd06625 STKc_MEKK3_like Cataly 100.0 8.1E-28 1.7E-32 264.3 16.1 206 263-585 55-263 (263)
170 KOG0293 WD40 repeat-containing 100.0 6.2E-26 1.3E-30 244.4 29.8 296 719-1048 213-514 (519)
171 KOG4645 MAPKKK (MAP kinase kin 100.0 7.7E-29 1.7E-33 300.2 8.0 256 214-589 1239-1501(1509)
172 cd06645 STKc_MAP4K3 Catalytic 100.0 1.1E-27 2.4E-32 264.2 16.5 246 213-584 10-267 (267)
173 cd05106 PTKc_CSF-1R Catalytic 100.0 8.9E-28 1.9E-32 279.0 16.5 156 326-582 209-368 (374)
174 KOG0292 Vesicle coat complex C 99.9 1.6E-26 3.4E-31 267.3 26.3 257 732-1013 11-299 (1202)
175 KOG0277 Peroxisomal targeting 99.9 9.7E-27 2.1E-31 237.4 21.4 244 783-1050 12-268 (311)
176 cd08227 PK_STRAD_alpha Pseudok 99.9 1.4E-27 3E-32 272.3 16.9 214 263-588 50-313 (327)
177 cd05605 STKc_GRK4_like Catalyt 99.9 7.6E-28 1.6E-32 268.8 14.4 205 263-588 51-267 (285)
178 PF00069 Pkinase: Protein kina 99.9 2E-28 4.3E-33 268.2 9.5 242 220-585 9-260 (260)
179 cd05633 STKc_GRK3 Catalytic do 99.9 8.2E-28 1.8E-32 267.8 14.4 204 264-589 49-262 (279)
180 cd07853 STKc_NLK Catalytic dom 99.9 8.7E-28 1.9E-32 279.0 15.0 213 262-589 49-295 (372)
181 cd06644 STKc_STK10_LOK Catalyt 99.9 2.6E-27 5.6E-32 265.2 18.3 208 263-590 60-277 (292)
182 cd05104 PTKc_Kit Catalytic dom 99.9 1.8E-27 3.8E-32 276.7 17.4 157 325-582 210-370 (375)
183 KOG0577 Serine/threonine prote 99.9 8.4E-28 1.8E-32 269.4 14.0 239 219-590 35-286 (948)
184 KOG1989 ARK protein kinase fam 99.9 2.4E-28 5.2E-33 290.5 10.2 272 191-585 27-310 (738)
185 cd05049 PTKc_Trk Catalytic dom 99.9 3.4E-27 7.3E-32 262.0 18.8 252 213-581 6-276 (280)
186 cd05615 STKc_cPKC_alpha Cataly 99.9 8.6E-28 1.9E-32 273.6 14.3 178 305-588 78-263 (323)
187 cd05096 PTKc_DDR1 Catalytic do 99.9 1.6E-27 3.4E-32 268.7 16.2 202 263-581 70-300 (304)
188 cd05597 STKc_DMPK_like Catalyt 99.9 1E-27 2.2E-32 273.9 14.8 207 264-588 53-272 (331)
189 cd05054 PTKc_VEGFR Catalytic d 99.9 3.4E-27 7.3E-32 270.3 19.1 254 213-582 8-329 (337)
190 cd08529 STKc_FA2-like Catalyti 99.9 1.2E-27 2.7E-32 261.5 14.8 203 263-585 50-256 (256)
191 KOG0318 WD40 repeat stress pro 99.9 2.3E-25 4.9E-30 246.7 32.4 299 723-1047 183-602 (603)
192 cd07839 STKc_CDK5 Catalytic do 99.9 8.5E-28 1.8E-32 267.6 13.5 203 263-585 50-284 (284)
193 cd06611 STKc_SLK_like Catalyti 99.9 2.2E-27 4.8E-32 263.8 16.8 250 213-588 6-268 (280)
194 KOG0313 Microtubule binding pr 99.9 1.8E-26 3.9E-31 247.0 22.9 261 721-986 135-418 (423)
195 cd05111 PTK_HER3 Pseudokinase 99.9 3E-27 6.4E-32 263.1 17.8 199 265-582 62-264 (279)
196 cd05064 PTKc_EphR_A10 Catalyti 99.9 1.8E-27 4E-32 262.8 15.9 200 263-581 57-260 (266)
197 KOG0669 Cyclin T-dependent kin 99.9 5.5E-28 1.2E-32 247.2 10.7 231 249-590 56-323 (376)
198 cd00200 WD40 WD40 domain, foun 99.9 4.3E-25 9.4E-30 240.3 34.3 250 774-1053 4-255 (289)
199 cd05090 PTKc_Ror1 Catalytic do 99.9 2.1E-27 4.6E-32 264.5 16.5 203 263-583 58-280 (283)
200 cd05091 PTKc_Ror2 Catalytic do 99.9 3.1E-27 6.7E-32 263.1 17.7 254 211-582 4-279 (283)
201 cd06609 STKc_MST3_like Catalyt 99.9 2.3E-27 4.9E-32 262.9 16.3 205 263-589 50-258 (274)
202 cd08223 STKc_Nek4 Catalytic do 99.9 2.2E-27 4.7E-32 259.9 15.9 204 263-585 50-257 (257)
203 cd05077 PTK_Jak1_rpt1 Pseudoki 99.9 2.8E-27 6.1E-32 260.9 16.6 194 263-582 55-260 (262)
204 KOG0274 Cdc4 and related F-box 99.9 9E-26 1.9E-30 267.8 30.2 269 744-1053 218-488 (537)
205 cd06624 STKc_ASK Catalytic dom 99.9 3.4E-27 7.3E-32 260.6 16.9 244 217-585 15-268 (268)
206 cd07861 STKc_CDK1_euk Catalyti 99.9 1.4E-27 3.1E-32 265.7 13.8 203 263-585 50-285 (285)
207 cd05109 PTKc_HER2 Catalytic do 99.9 3.7E-27 7.9E-32 262.1 17.0 201 263-581 60-263 (279)
208 cd05630 STKc_GRK6 Catalytic do 99.9 1.2E-27 2.6E-32 267.3 13.1 206 263-588 51-267 (285)
209 cd05624 STKc_MRCK_beta Catalyt 99.9 8.3E-28 1.8E-32 274.7 12.0 207 264-588 53-272 (331)
210 cd06615 PKc_MEK Catalytic doma 99.9 1.7E-27 3.7E-32 269.1 14.4 204 262-588 49-293 (308)
211 cd05094 PTKc_TrkC Catalytic do 99.9 3.2E-27 6.9E-32 264.5 16.4 203 263-582 58-278 (291)
212 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.9 3.7E-27 8E-32 259.1 16.6 195 263-582 50-256 (258)
213 KOG0645 WD40 repeat protein [G 99.9 2.9E-25 6.3E-30 228.8 29.2 243 774-1048 9-262 (312)
214 cd05632 STKc_GRK5 Catalytic do 99.9 2.9E-27 6.4E-32 264.1 15.9 206 263-589 51-268 (285)
215 cd06636 STKc_MAP4K4_6 Catalyti 99.9 2.7E-27 5.8E-32 263.4 15.1 178 305-585 96-282 (282)
216 KOG0305 Anaphase promoting com 99.9 1.5E-25 3.2E-30 256.8 29.5 271 741-1048 184-462 (484)
217 cd05574 STKc_phototropin_like 99.9 6.3E-27 1.4E-31 265.2 18.1 240 263-592 52-299 (316)
218 cd06622 PKc_MAPKK_PBS2_like Ca 99.9 5.8E-27 1.3E-31 261.3 17.1 207 263-590 50-270 (286)
219 cd06612 STKc_MST1_2 Catalytic 99.9 5.3E-27 1.1E-31 256.5 16.3 204 263-585 49-256 (256)
220 cd05092 PTKc_TrkA Catalytic do 99.9 6E-27 1.3E-31 260.7 17.0 201 263-581 58-276 (280)
221 PTZ00266 NIMA-related protein 99.9 1.7E-27 3.6E-32 294.8 13.6 208 262-588 62-301 (1021)
222 cd05093 PTKc_TrkB Catalytic do 99.9 7E-27 1.5E-31 261.3 17.3 201 263-581 58-274 (288)
223 cd07832 STKc_CCRK Catalytic do 99.9 4.7E-27 1E-31 261.5 15.7 205 263-586 50-286 (286)
224 cd06628 STKc_MAPKKK_Byr2_like 99.9 6.4E-27 1.4E-31 258.0 16.5 208 263-585 57-267 (267)
225 cd06654 STKc_PAK1 Catalytic do 99.9 7.5E-27 1.6E-31 262.4 17.1 206 263-589 68-277 (296)
226 cd05115 PTKc_Zap-70 Catalytic 99.9 6.7E-27 1.5E-31 257.1 16.3 203 263-582 46-251 (257)
227 KOG0580 Serine/threonine prote 99.9 1.9E-27 4.2E-32 243.0 11.0 249 214-588 24-279 (281)
228 cd05084 PTKc_Fes Catalytic dom 99.9 9.8E-27 2.1E-31 254.3 17.4 240 220-582 5-249 (252)
229 cd05033 PTKc_EphR Catalytic do 99.9 1.2E-26 2.6E-31 255.9 18.3 202 263-582 56-261 (266)
230 KOG0292 Vesicle coat complex C 99.9 3.7E-26 8E-31 264.3 22.5 250 777-1053 7-286 (1202)
231 cd06646 STKc_MAP4K5 Catalytic 99.9 5.6E-27 1.2E-31 258.6 15.2 247 212-584 9-267 (267)
232 cd07831 STKc_MOK Catalytic dom 99.9 9E-27 2E-31 258.7 16.6 202 264-585 49-282 (282)
233 cd06658 STKc_PAK5 Catalytic do 99.9 6.1E-27 1.3E-31 262.6 15.2 252 213-592 25-282 (292)
234 cd06619 PKc_MKK5 Catalytic dom 99.9 9.4E-27 2E-31 259.0 16.5 199 264-588 51-259 (279)
235 KOG0584 Serine/threonine prote 99.9 3.1E-27 6.8E-32 270.2 12.8 250 213-588 43-302 (632)
236 PHA03390 pk1 serine/threonine- 99.9 5.5E-27 1.2E-31 259.4 14.2 191 270-586 67-266 (267)
237 cd05089 PTKc_Tie1 Catalytic do 99.9 1E-26 2.2E-31 261.2 16.7 198 264-582 54-271 (297)
238 cd06605 PKc_MAPKK Catalytic do 99.9 8.2E-27 1.8E-31 256.6 15.3 205 263-588 50-263 (265)
239 cd07843 STKc_CDC2L1 Catalytic 99.9 1.1E-26 2.3E-31 260.3 16.4 253 211-585 4-293 (293)
240 cd05114 PTKc_Tec_Rlk Catalytic 99.9 6.9E-27 1.5E-31 256.3 14.3 236 221-582 15-254 (256)
241 cd05113 PTKc_Btk_Bmx Catalytic 99.9 9.4E-27 2E-31 255.6 15.2 236 221-582 15-254 (256)
242 cd06651 STKc_MEKK3 Catalytic d 99.9 1.1E-26 2.4E-31 256.3 15.8 208 263-586 55-265 (266)
243 cd05116 PTKc_Syk Catalytic dom 99.9 1.6E-26 3.5E-31 253.7 16.9 201 263-582 47-251 (257)
244 cd05052 PTKc_Abl Catalytic dom 99.9 1.2E-26 2.6E-31 255.7 15.9 201 263-582 53-258 (263)
245 cd07841 STKc_CDK7 Catalytic do 99.9 1.1E-26 2.4E-31 260.6 16.0 210 263-592 53-292 (298)
246 PHA03210 serine/threonine kina 99.9 1.2E-26 2.5E-31 279.3 17.2 207 263-588 214-460 (501)
247 cd05062 PTKc_IGF-1R Catalytic 99.9 1.6E-26 3.4E-31 256.7 17.0 202 263-582 60-274 (277)
248 cd06655 STKc_PAK2 Catalytic do 99.9 1.5E-26 3.3E-31 259.9 17.0 207 263-590 67-277 (296)
249 cd05058 PTKc_Met_Ron Catalytic 99.9 2.1E-26 4.6E-31 253.0 17.8 205 263-582 47-255 (262)
250 cd06632 STKc_MEKK1_plant Catal 99.9 1.6E-26 3.4E-31 252.9 16.5 202 263-585 53-258 (258)
251 cd05075 PTKc_Axl Catalytic dom 99.9 2.4E-26 5.3E-31 254.0 18.2 208 263-582 51-267 (272)
252 cd06648 STKc_PAK_II Catalytic 99.9 1.7E-26 3.8E-31 257.9 17.2 207 263-591 67-278 (285)
253 cd07837 STKc_CdkB_plant Cataly 99.9 7.6E-27 1.6E-31 261.4 14.1 207 265-586 53-295 (295)
254 cd06656 STKc_PAK3 Catalytic do 99.9 8.9E-27 1.9E-31 261.9 14.6 209 263-592 67-279 (297)
255 KOG0316 Conserved WD40 repeat- 99.9 4.1E-25 9E-30 223.1 25.0 282 722-1044 9-296 (307)
256 cd06659 STKc_PAK6 Catalytic do 99.9 1.7E-26 3.8E-31 259.6 16.9 249 214-590 25-279 (297)
257 PTZ00421 coronin; Provisional 99.9 3E-24 6.6E-29 254.4 36.7 212 775-987 71-291 (493)
258 cd05105 PTKc_PDGFR_alpha Catal 99.9 1.4E-26 3E-31 270.7 16.6 155 326-581 234-392 (400)
259 cd00192 PTKc Catalytic domain 99.9 2.1E-26 4.6E-31 251.8 17.1 244 220-582 5-260 (262)
260 cd08217 STKc_Nek2 Catalytic do 99.9 1.5E-26 3.2E-31 253.8 15.7 205 263-585 50-265 (265)
261 cd05110 PTKc_HER4 Catalytic do 99.9 2.4E-26 5.2E-31 259.1 17.7 201 263-582 60-264 (303)
262 cd05576 STKc_RPK118_like Catal 99.9 7E-27 1.5E-31 253.8 12.6 192 268-585 41-237 (237)
263 cd05148 PTKc_Srm_Brk Catalytic 99.9 2.9E-26 6.3E-31 251.8 17.6 244 213-582 7-257 (261)
264 cd05606 STKc_beta_ARK Catalyti 99.9 1E-26 2.2E-31 258.8 14.1 204 264-589 49-262 (278)
265 cd07845 STKc_CDK10 Catalytic d 99.9 1.8E-26 4E-31 260.6 16.3 212 263-592 57-300 (309)
266 cd05035 PTKc_Axl_like Catalyti 99.9 3.2E-26 6.8E-31 252.9 17.8 208 263-582 52-268 (273)
267 KOG0690 Serine/threonine prote 99.9 2.4E-27 5.1E-32 249.8 8.2 242 222-589 182-431 (516)
268 cd07860 STKc_CDK2_3 Catalytic 99.9 1.5E-26 3.2E-31 257.6 15.2 203 263-585 50-284 (284)
269 cd05059 PTKc_Tec_like Catalyti 99.9 2.7E-26 5.9E-31 251.7 16.9 201 263-582 50-254 (256)
270 cd05061 PTKc_InsR Catalytic do 99.9 2.8E-26 6E-31 256.4 17.3 207 263-587 60-285 (288)
271 cd06642 STKc_STK25-YSK1 Cataly 99.9 1.8E-26 4E-31 256.2 15.6 205 263-588 53-259 (277)
272 cd07844 STKc_PCTAIRE_like Cata 99.9 1.2E-26 2.6E-31 259.5 14.1 203 263-585 54-291 (291)
273 cd06640 STKc_MST4 Catalytic do 99.9 1.9E-26 4.2E-31 256.1 15.7 204 263-588 53-259 (277)
274 cd06638 STKc_myosinIIIA Cataly 99.9 2.9E-26 6.3E-31 255.5 17.1 207 264-585 66-286 (286)
275 cd06629 STKc_MAPKKK_Bck1_like 99.9 2.3E-26 5E-31 254.4 16.2 205 263-585 59-272 (272)
276 cd06652 STKc_MEKK2 Catalytic d 99.9 1.8E-26 3.8E-31 254.4 15.0 208 263-586 55-265 (265)
277 KOG0665 Jun-N-terminal kinase 99.9 5.8E-27 1.2E-31 248.4 10.3 206 263-586 66-314 (369)
278 cd05572 STKc_cGK_PKG Catalytic 99.9 2.7E-26 5.9E-31 252.3 16.2 205 263-588 44-258 (262)
279 cd05079 PTKc_Jak1_rpt2 Catalyt 99.9 3.9E-26 8.5E-31 254.6 17.6 206 263-582 57-279 (284)
280 cd06610 STKc_OSR1_SPAK Catalyt 99.9 2.9E-26 6.4E-31 252.1 16.2 246 220-585 11-267 (267)
281 KOG0288 WD40 repeat protein Ti 99.9 1.9E-25 4.2E-30 241.3 21.9 284 722-1045 167-459 (459)
282 cd05088 PTKc_Tie2 Catalytic do 99.9 1.9E-26 4.2E-31 259.9 14.9 199 264-583 59-277 (303)
283 cd06613 STKc_MAP4K3_like Catal 99.9 3.9E-26 8.5E-31 250.6 16.9 203 263-584 51-262 (262)
284 cd06630 STKc_MEKK1 Catalytic d 99.9 3.1E-26 6.8E-31 252.4 15.9 209 262-586 53-268 (268)
285 cd05101 PTKc_FGFR2 Catalytic d 99.9 5.1E-26 1.1E-30 256.3 18.0 201 264-582 72-292 (304)
286 cd07870 STKc_PFTAIRE2 Catalyti 99.9 3.7E-26 8E-31 255.6 16.7 203 263-585 54-291 (291)
287 cd05037 PTK_Jak_rpt1 Pseudokin 99.9 3.3E-26 7.1E-31 250.7 15.9 194 263-582 52-257 (259)
288 cd05040 PTKc_Ack_like Catalyti 99.9 5.8E-26 1.3E-30 248.8 17.8 245 220-582 5-254 (257)
289 cd05053 PTKc_FGFR Catalytic do 99.9 2.7E-26 5.9E-31 256.8 15.5 201 264-582 67-287 (293)
290 KOG0310 Conserved WD40 repeat- 99.9 7.7E-25 1.7E-29 241.6 26.2 278 731-1044 27-306 (487)
291 KOG0986 G protein-coupled rece 99.9 2.2E-27 4.7E-32 260.5 6.1 183 305-591 262-455 (591)
292 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.9 3.9E-26 8.5E-31 253.6 16.3 193 263-582 67-272 (274)
293 cd05032 PTKc_InsR_like Catalyt 99.9 5.7E-26 1.2E-30 251.8 17.6 202 263-582 60-274 (277)
294 cd07850 STKc_JNK Catalytic dom 99.9 2.6E-26 5.6E-31 264.7 15.4 209 262-588 65-317 (353)
295 cd05072 PTKc_Lyn Catalytic dom 99.9 2.3E-26 5E-31 252.8 14.1 236 220-581 16-256 (261)
296 cd05060 PTKc_Syk_like Catalyti 99.9 5.8E-26 1.3E-30 249.1 17.3 201 263-581 47-250 (257)
297 cd07865 STKc_CDK9 Catalytic do 99.9 8.4E-26 1.8E-30 254.5 19.0 215 263-585 62-310 (310)
298 cd06639 STKc_myosinIIIB Cataly 99.9 5.3E-26 1.2E-30 254.3 17.3 207 265-586 71-291 (291)
299 cd05055 PTKc_PDGFR Catalytic d 99.9 6.1E-26 1.3E-30 255.8 17.8 203 263-582 89-297 (302)
300 PLN03225 Serine/threonine-prot 99.9 4.7E-26 1E-30 276.1 18.0 185 304-590 211-458 (566)
301 cd06608 STKc_myosinIII_like Ca 99.9 2.9E-26 6.4E-31 253.0 14.9 208 264-585 54-275 (275)
302 cd08229 STKc_Nek7 Catalytic do 99.9 6.2E-26 1.4E-30 250.0 17.4 246 212-581 2-260 (267)
303 cd05036 PTKc_ALK_LTK Catalytic 99.9 5E-26 1.1E-30 252.8 16.7 203 263-583 60-275 (277)
304 cd05609 STKc_MAST Catalytic do 99.9 4.5E-26 9.8E-31 257.0 16.5 224 263-592 52-283 (305)
305 PTZ00421 coronin; Provisional 99.9 5.6E-24 1.2E-28 252.1 35.0 255 780-1053 21-296 (493)
306 KOG0193 Serine/threonine prote 99.9 6.8E-27 1.5E-31 265.5 9.7 237 219-582 401-649 (678)
307 cd05085 PTKc_Fer Catalytic dom 99.9 1E-25 2.3E-30 245.8 18.7 238 220-582 5-247 (250)
308 cd08221 STKc_Nek9 Catalytic do 99.9 6.7E-26 1.5E-30 248.2 17.2 205 261-585 48-256 (256)
309 cd06917 STKc_NAK1_like Catalyt 99.9 4.2E-26 9.1E-31 253.0 15.8 178 305-589 79-262 (277)
310 KOG1095 Protein tyrosine kinas 99.9 2.5E-26 5.4E-31 281.2 15.2 241 222-581 704-956 (1025)
311 cd05045 PTKc_RET Catalytic dom 99.9 6E-26 1.3E-30 253.9 17.0 201 263-581 54-281 (290)
312 cd05103 PTKc_VEGFR2 Catalytic 99.9 6.3E-26 1.4E-30 260.5 17.6 156 326-582 176-335 (343)
313 cd06623 PKc_MAPKK_plant_like C 99.9 5E-26 1.1E-30 249.8 16.0 206 263-588 50-262 (264)
314 cd05070 PTKc_Fyn_Yrk Catalytic 99.9 4E-26 8.6E-31 250.9 15.2 234 221-581 17-255 (260)
315 KOG0586 Serine/threonine prote 99.9 1.1E-26 2.5E-31 265.5 11.0 206 263-591 106-315 (596)
316 cd07847 STKc_CDKL1_4 Catalytic 99.9 3.5E-26 7.6E-31 254.5 14.8 203 263-585 51-286 (286)
317 cd06633 STKc_TAO3 Catalytic do 99.9 1.2E-25 2.5E-30 254.8 19.1 203 263-589 72-280 (313)
318 cd08216 PK_STRAD Pseudokinase 99.9 5.2E-26 1.1E-30 257.3 16.2 215 263-589 50-302 (314)
319 cd05063 PTKc_EphR_A2 Catalytic 99.9 8.3E-26 1.8E-30 249.4 17.4 204 262-582 56-263 (268)
320 cd05042 PTKc_Aatyk Catalytic d 99.9 6.4E-26 1.4E-30 250.6 16.5 242 220-582 5-266 (269)
321 cd08219 STKc_Nek3 Catalytic do 99.9 4.2E-26 9E-31 249.8 14.9 200 263-582 49-252 (255)
322 cd06635 STKc_TAO1 Catalytic do 99.9 2.8E-25 6E-30 252.1 22.2 202 263-588 76-283 (317)
323 cd05044 PTKc_c-ros Catalytic d 99.9 8.8E-26 1.9E-30 249.1 17.6 245 220-582 5-266 (269)
324 cd08226 PK_STRAD_beta Pseudoki 99.9 7.2E-26 1.6E-30 258.2 17.4 216 264-591 51-317 (328)
325 cd08228 STKc_Nek6 Catalytic do 99.9 5E-26 1.1E-30 250.8 15.6 202 262-582 52-261 (267)
326 cd05056 PTKc_FAK Catalytic dom 99.9 6.3E-26 1.4E-30 250.8 16.4 200 263-582 58-261 (270)
327 cd05083 PTKc_Chk Catalytic dom 99.9 8.8E-26 1.9E-30 247.3 17.3 236 214-582 8-250 (254)
328 cd06617 PKc_MKK3_6 Catalytic d 99.9 4.9E-26 1.1E-30 253.1 15.4 204 265-589 53-268 (283)
329 KOG0640 mRNA cleavage stimulat 99.9 3E-25 6.5E-30 231.4 20.0 260 775-1046 108-425 (430)
330 cd07849 STKc_ERK1_2_like Catal 99.9 5.9E-26 1.3E-30 259.8 16.3 216 262-591 53-301 (336)
331 cd05579 STKc_MAST_like Catalyt 99.9 3.5E-26 7.5E-31 250.8 13.8 214 263-588 44-263 (265)
332 KOG0282 mRNA splicing factor [ 99.9 5.8E-26 1.2E-30 249.9 15.4 254 774-1050 209-465 (503)
333 cd05051 PTKc_DDR Catalytic dom 99.9 7.8E-26 1.7E-30 253.4 16.9 203 263-582 70-293 (296)
334 cd07855 STKc_ERK5 Catalytic do 99.9 3.5E-26 7.5E-31 261.5 14.3 219 262-593 54-305 (334)
335 cd08225 STKc_Nek5 Catalytic do 99.9 5.2E-26 1.1E-30 248.9 15.1 203 263-585 50-257 (257)
336 cd05577 STKc_GRK Catalytic dom 99.9 5.1E-26 1.1E-30 252.7 15.1 206 263-589 44-261 (277)
337 cd05107 PTKc_PDGFR_beta Cataly 99.9 7.8E-26 1.7E-30 264.4 17.3 156 326-582 236-395 (401)
338 cd08220 STKc_Nek8 Catalytic do 99.9 6.7E-26 1.4E-30 247.8 15.8 202 263-585 50-256 (256)
339 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.9 1.2E-25 2.5E-30 248.6 17.7 242 220-581 5-265 (269)
340 cd07857 STKc_MPK1 Catalytic do 99.9 5.2E-26 1.1E-30 259.9 15.3 186 306-592 84-302 (332)
341 cd05047 PTKc_Tie Catalytic dom 99.9 9.9E-26 2.1E-30 249.5 17.0 198 264-582 47-264 (270)
342 cd05098 PTKc_FGFR1 Catalytic d 99.9 9E-26 1.9E-30 254.8 16.9 201 265-583 76-296 (307)
343 PTZ00420 coronin; Provisional 99.9 9.7E-24 2.1E-28 251.3 35.0 230 796-1050 49-296 (568)
344 cd05580 STKc_PKA Catalytic dom 99.9 6E-26 1.3E-30 254.0 15.3 202 263-589 52-261 (290)
345 cd05050 PTKc_Musk Catalytic do 99.9 1E-25 2.2E-30 251.7 17.1 201 263-581 59-284 (288)
346 cd05611 STKc_Rim15_like Cataly 99.9 6.2E-26 1.3E-30 249.2 15.1 198 266-588 51-257 (260)
347 cd08222 STKc_Nek11 Catalytic d 99.9 5.8E-26 1.3E-30 249.4 14.8 201 264-585 54-260 (260)
348 cd05086 PTKc_Aatyk2 Catalytic 99.9 1.4E-25 3E-30 248.1 17.9 202 263-582 46-265 (268)
349 cd05066 PTKc_EphR_A Catalytic 99.9 1.1E-25 2.3E-30 248.6 16.9 204 263-582 56-262 (267)
350 cd05097 PTKc_DDR_like Catalyti 99.9 1.4E-25 3E-30 251.7 18.0 202 263-581 68-291 (295)
351 cd05099 PTKc_FGFR4 Catalytic d 99.9 1.2E-25 2.7E-30 254.6 17.7 202 263-582 68-289 (314)
352 cd06614 STKc_PAK Catalytic dom 99.9 1.1E-25 2.5E-30 251.0 17.1 205 263-587 66-275 (286)
353 cd06620 PKc_MAPKK_Byr1_like Ca 99.9 9.5E-26 2.1E-30 251.5 16.4 204 263-588 54-272 (284)
354 cd07846 STKc_CDKL2_3 Catalytic 99.9 4.1E-26 8.9E-31 254.1 13.4 203 263-585 51-286 (286)
355 cd05068 PTKc_Frk_like Catalyti 99.9 1.6E-25 3.5E-30 246.2 17.9 236 220-581 16-256 (261)
356 cd07836 STKc_Pho85 Catalytic d 99.9 6E-26 1.3E-30 252.5 14.7 203 263-585 49-284 (284)
357 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.9 1.3E-25 2.8E-30 250.1 17.4 206 263-582 56-279 (284)
358 cd05071 PTKc_Src Catalytic dom 99.9 7.9E-26 1.7E-30 249.2 15.4 234 221-581 17-255 (262)
359 cd05069 PTKc_Yes Catalytic dom 99.9 8.3E-26 1.8E-30 248.5 15.3 236 219-581 15-255 (260)
360 cd06641 STKc_MST3 Catalytic do 99.9 1.1E-25 2.3E-30 250.1 16.3 205 263-588 53-259 (277)
361 cd05082 PTKc_Csk Catalytic dom 99.9 1.4E-25 3E-30 246.0 17.0 197 263-581 50-251 (256)
362 cd05041 PTKc_Fes_like Catalyti 99.9 1.2E-25 2.7E-30 245.3 16.5 241 219-582 4-248 (251)
363 cd06607 STKc_TAO Catalytic dom 99.9 2.9E-25 6.3E-30 250.7 20.0 201 263-588 66-273 (307)
364 cd05095 PTKc_DDR2 Catalytic do 99.9 1.8E-25 3.9E-30 251.0 18.2 203 263-582 70-293 (296)
365 KOG0270 WD40 repeat-containing 99.9 1.3E-24 2.9E-29 237.1 24.2 271 756-1050 152-452 (463)
366 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.9 1.6E-25 3.5E-30 249.4 17.5 203 263-581 57-276 (283)
367 cd08218 STKc_Nek1 Catalytic do 99.9 7.9E-26 1.7E-30 247.6 14.6 203 263-585 50-256 (256)
368 cd08224 STKc_Nek6_Nek7 Catalyt 99.9 1E-25 2.3E-30 247.9 15.5 200 263-581 53-260 (267)
369 cd06616 PKc_MKK4 Catalytic dom 99.9 1.5E-25 3.3E-30 250.1 17.0 203 265-588 55-273 (288)
370 cd07880 STKc_p38gamma_MAPK12 C 99.9 1.4E-25 3E-30 257.7 16.9 212 262-592 64-308 (343)
371 KOG0772 Uncharacterized conser 99.9 8.1E-25 1.7E-29 241.4 22.0 298 724-1044 161-484 (641)
372 KOG0574 STE20-like serine/thre 99.9 5E-27 1.1E-31 244.9 4.4 249 214-590 35-291 (502)
373 cd05065 PTKc_EphR_B Catalytic 99.9 1.6E-25 3.4E-30 247.4 16.6 205 263-582 56-264 (269)
374 PLN00009 cyclin-dependent kina 99.9 7.6E-26 1.7E-30 253.5 14.1 208 263-590 52-292 (294)
375 cd05043 PTK_Ryk Pseudokinase d 99.9 1.8E-25 3.9E-30 248.5 16.9 244 220-581 16-271 (280)
376 cd05057 PTKc_EGFR_like Catalyt 99.9 2.2E-25 4.7E-30 247.8 17.6 200 263-581 60-263 (279)
377 PTZ00420 coronin; Provisional 99.9 1.6E-23 3.5E-28 249.4 34.5 230 750-987 50-294 (568)
378 cd07838 STKc_CDK4_6_like Catal 99.9 1.3E-25 2.9E-30 249.8 15.8 205 265-585 54-287 (287)
379 KOG0306 WD40-repeat-containing 99.9 6.8E-24 1.5E-28 243.0 29.8 286 725-1051 368-668 (888)
380 KOG0612 Rho-associated, coiled 99.9 5.9E-26 1.3E-30 272.2 13.6 179 306-589 153-345 (1317)
381 cd05112 PTKc_Itk Catalytic dom 99.9 1.4E-25 3.1E-30 245.6 15.6 236 221-582 15-254 (256)
382 cd06657 STKc_PAK4 Catalytic do 99.9 2E-25 4.3E-30 250.4 17.0 248 215-591 25-279 (292)
383 cd05039 PTKc_Csk_like Catalyti 99.9 2.1E-25 4.5E-30 244.4 16.8 231 221-582 17-252 (256)
384 cd07835 STKc_CDK1_like Catalyt 99.9 1.1E-25 2.4E-30 250.5 14.8 203 263-585 49-283 (283)
385 KOG0300 WD40 repeat-containing 99.9 1.5E-23 3.2E-28 219.0 29.4 305 721-1050 139-479 (481)
386 cd06647 STKc_PAK_I Catalytic d 99.9 1.3E-25 2.8E-30 252.0 15.1 207 263-590 67-277 (293)
387 cd07858 STKc_TEY_MAPK_plant Ca 99.9 1.3E-25 2.8E-30 257.2 15.4 214 263-592 55-301 (337)
388 cd05122 PKc_STE Catalytic doma 99.9 1.8E-25 4E-30 242.6 15.8 201 263-584 48-253 (253)
389 KOG2345 Serine/threonine prote 99.9 4.5E-26 9.7E-31 233.8 10.2 257 214-582 23-296 (302)
390 cd07830 STKc_MAK_like Catalyti 99.9 2.1E-25 4.6E-30 248.0 16.5 240 220-585 9-283 (283)
391 KOG0671 LAMMER dual specificit 99.9 2E-26 4.3E-31 249.7 7.7 195 307-588 169-412 (415)
392 cd08215 STKc_Nek Catalytic dom 99.9 1.8E-25 4E-30 243.8 15.5 203 263-585 50-258 (258)
393 PRK13184 pknD serine/threonine 99.9 9.9E-26 2.1E-30 278.3 14.8 220 263-583 53-286 (932)
394 cd05118 STKc_CMGC Catalytic do 99.9 1.4E-25 2.9E-30 249.2 14.6 203 263-585 49-283 (283)
395 cd06626 STKc_MEKK4 Catalytic d 99.9 2.8E-25 6.1E-30 244.1 16.9 206 264-585 51-264 (264)
396 smart00219 TyrKc Tyrosine kina 99.9 3.2E-25 7E-30 242.3 17.1 244 220-582 9-257 (258)
397 cd05578 STKc_Yank1 Catalytic d 99.9 9.2E-26 2E-30 247.6 12.7 201 263-585 51-258 (258)
398 KOG1187 Serine/threonine prote 99.9 7.1E-26 1.5E-30 259.2 12.2 240 218-582 83-348 (361)
399 cd07877 STKc_p38alpha_MAPK14 C 99.9 3.3E-25 7.2E-30 254.7 17.5 213 262-593 66-311 (345)
400 KOG0289 mRNA splicing factor [ 99.9 7.8E-24 1.7E-28 229.9 26.8 269 745-1046 232-505 (506)
401 KOG0275 Conserved WD40 repeat- 99.9 3.8E-25 8.3E-30 231.1 16.0 275 743-1046 222-508 (508)
402 cd07834 STKc_MAPK Catalytic do 99.9 2.5E-25 5.4E-30 253.7 16.2 217 263-592 50-299 (330)
403 cd06621 PKc_MAPKK_Pek1_like Ca 99.9 3.6E-25 7.9E-30 247.3 17.2 207 263-588 50-272 (287)
404 cd07851 STKc_p38 Catalytic dom 99.9 1.9E-25 4.2E-30 256.4 15.1 211 263-592 65-308 (343)
405 cd06606 STKc_MAPKKK Catalytic 99.9 2.6E-25 5.7E-30 242.4 15.5 207 263-585 50-260 (260)
406 cd07879 STKc_p38delta_MAPK13 C 99.9 2.8E-25 6.1E-30 255.0 16.4 210 263-592 65-307 (342)
407 cd07842 STKc_CDK8_like Catalyt 99.9 1.4E-25 3.1E-30 253.6 13.7 208 263-585 53-316 (316)
408 cd05100 PTKc_FGFR3 Catalytic d 99.9 3.5E-25 7.6E-30 253.2 17.1 203 263-583 68-290 (334)
409 cd06653 STKc_MEKK3_like_1 Cata 99.9 4.3E-25 9.4E-30 243.4 17.1 207 263-585 55-264 (264)
410 KOG0275 Conserved WD40 repeat- 99.9 8.9E-25 1.9E-29 228.4 18.3 256 777-1053 211-473 (508)
411 KOG0641 WD40 repeat protein [G 99.9 1E-22 2.2E-27 204.1 32.1 289 733-1046 35-348 (350)
412 KOG0294 WD40 repeat-containing 99.9 1.7E-23 3.7E-28 219.7 27.7 245 774-1049 38-283 (362)
413 cd05067 PTKc_Lck_Blk Catalytic 99.9 2.7E-25 5.9E-30 244.2 15.0 235 220-581 16-255 (260)
414 cd06634 STKc_TAO2 Catalytic do 99.9 5E-25 1.1E-29 249.0 17.5 204 263-590 66-275 (308)
415 cd07866 STKc_BUR1 Catalytic do 99.9 5.3E-25 1.1E-29 248.1 17.4 222 263-585 58-311 (311)
416 PF07714 Pkinase_Tyr: Protein 99.9 7.3E-26 1.6E-30 249.3 10.0 243 221-581 10-257 (259)
417 PTZ00024 cyclin-dependent prot 99.9 2.8E-25 6.2E-30 253.9 15.3 221 263-590 71-321 (335)
418 cd05046 PTK_CCK4 Pseudokinase 99.9 7.1E-25 1.5E-29 242.9 17.9 201 263-582 59-272 (275)
419 cd05073 PTKc_Hck Catalytic dom 99.9 3.1E-25 6.8E-30 243.9 14.9 199 263-581 52-255 (260)
420 KOG0274 Cdc4 and related F-box 99.9 5.6E-24 1.2E-28 252.5 26.3 239 777-1053 206-447 (537)
421 KOG0607 MAP kinase-interacting 99.9 5.8E-26 1.3E-30 239.3 8.3 209 270-591 134-370 (463)
422 cd07854 STKc_MAPK4_6 Catalytic 99.9 3.8E-25 8.3E-30 253.8 15.6 220 263-590 53-308 (342)
423 cd05610 STKc_MASTL Catalytic d 99.9 8.3E-25 1.8E-29 271.4 19.7 101 263-380 55-155 (669)
424 cd07829 STKc_CDK_like Catalyti 99.9 5.5E-25 1.2E-29 244.2 16.3 202 264-585 50-282 (282)
425 cd06627 STKc_Cdc7_like Catalyt 99.9 6.7E-25 1.5E-29 239.2 16.4 202 263-585 50-254 (254)
426 cd05034 PTKc_Src_like Catalyti 99.9 6E-25 1.3E-29 241.4 16.2 235 221-581 17-256 (261)
427 cd07852 STKc_MAPK15 Catalytic 99.9 4.9E-25 1.1E-29 252.3 16.0 214 263-591 57-304 (337)
428 cd07833 STKc_CDKL Catalytic do 99.9 6.2E-25 1.3E-29 244.7 15.7 204 263-585 51-288 (288)
429 cd06618 PKc_MKK7 Catalytic dom 99.9 8.4E-25 1.8E-29 245.5 16.8 203 266-589 68-280 (296)
430 cd05038 PTKc_Jak_rpt2 Catalyti 99.9 9.6E-25 2.1E-29 242.5 16.7 206 263-582 57-279 (284)
431 cd07864 STKc_CDK12 Catalytic d 99.9 9.2E-25 2E-29 245.4 16.3 213 263-585 57-302 (302)
432 KOG0983 Mitogen-activated prot 99.9 2E-25 4.2E-30 231.2 9.7 177 308-588 170-355 (391)
433 PHA02882 putative serine/threo 99.9 5.8E-25 1.3E-29 246.8 14.1 171 312-581 110-291 (294)
434 KOG1026 Nerve growth factor re 99.9 3.4E-25 7.3E-30 262.5 12.2 242 222-581 498-757 (774)
435 cd05581 STKc_PDK1 Catalytic do 99.9 8.1E-25 1.7E-29 242.4 14.5 220 264-585 53-280 (280)
436 cd07840 STKc_CDK9_like Catalyt 99.9 9.1E-25 2E-29 242.9 14.6 206 263-585 49-287 (287)
437 cd08528 STKc_Nek10 Catalytic d 99.9 2.2E-24 4.7E-29 238.2 17.1 195 268-582 65-266 (269)
438 KOG0278 Serine/threonine kinas 99.9 1.9E-24 4.1E-29 219.9 14.8 248 723-989 52-300 (334)
439 KOG1240 Protein kinase contain 99.9 2.2E-22 4.7E-27 240.8 34.7 276 765-1051 1035-1338(1431)
440 KOG0194 Protein tyrosine kinas 99.9 2.9E-25 6.3E-30 255.8 10.0 242 221-581 168-415 (474)
441 cd05074 PTKc_Tyro3 Catalytic d 99.9 3.2E-24 7E-29 237.2 17.2 208 263-582 52-268 (273)
442 cd08530 STKc_CNK2-like Catalyt 99.9 1.9E-24 4E-29 236.2 15.1 201 263-585 50-256 (256)
443 KOG4250 TANK binding protein k 99.9 7.2E-25 1.6E-29 253.7 12.4 192 219-528 22-220 (732)
444 KOG4236 Serine/threonine prote 99.9 2.2E-25 4.7E-30 247.1 7.4 252 214-589 566-826 (888)
445 cd05613 STKc_MSK1_N N-terminal 99.9 1.8E-24 4E-29 241.8 15.1 181 305-589 82-275 (290)
446 KOG0264 Nucleosome remodeling 99.9 2E-23 4.3E-28 229.3 21.7 257 729-986 123-404 (422)
447 cd05123 STKc_AGC Catalytic dom 99.9 3E-24 6.6E-29 233.9 15.3 200 264-585 45-250 (250)
448 KOG0301 Phospholipase A2-activ 99.9 3.7E-23 8E-28 235.8 24.4 280 723-1049 7-290 (745)
449 KOG0299 U3 snoRNP-associated p 99.9 1.1E-22 2.5E-27 222.9 27.1 293 723-1044 135-453 (479)
450 KOG0288 WD40 repeat protein Ti 99.9 3.6E-24 7.8E-29 231.5 15.0 252 775-1053 171-423 (459)
451 KOG1407 WD40 repeat protein [F 99.9 1E-22 2.2E-27 209.0 24.4 253 774-1054 15-268 (313)
452 KOG0310 Conserved WD40 repeat- 99.9 3.7E-23 8E-28 228.4 22.6 245 778-1051 25-272 (487)
453 KOG0278 Serine/threonine kinas 99.9 1.7E-23 3.6E-28 213.0 18.2 287 725-1050 9-300 (334)
454 KOG0696 Serine/threonine prote 99.9 1.4E-24 3E-29 235.0 11.0 179 304-588 426-612 (683)
455 KOG1446 Histone H3 (Lys4) meth 99.9 8.2E-22 1.8E-26 208.3 31.6 248 777-1052 12-267 (311)
456 cd05583 STKc_MSK_N N-terminal 99.9 2.8E-24 6.2E-29 240.0 13.3 206 263-588 55-272 (288)
457 KOG1332 Vesicle coat complex C 99.9 2.8E-23 6E-28 211.2 18.4 254 776-1049 8-288 (299)
458 KOG1027 Serine/threonine prote 99.9 1.4E-24 3E-29 254.4 10.0 236 224-588 524-773 (903)
459 KOG0973 Histone transcription 99.9 1.5E-22 3.2E-27 242.3 27.4 284 743-1049 22-357 (942)
460 KOG0614 cGMP-dependent protein 99.9 2.3E-24 5E-29 238.9 10.3 181 305-590 497-685 (732)
461 KOG0772 Uncharacterized conser 99.9 4.3E-23 9.3E-28 227.8 20.1 224 774-1008 162-409 (641)
462 smart00750 KIND kinase non-cat 99.9 7.3E-24 1.6E-28 218.9 13.1 160 313-588 1-171 (176)
463 KOG0643 Translation initiation 99.9 5.1E-22 1.1E-26 204.4 25.7 254 775-1050 6-320 (327)
464 cd07856 STKc_Sty1_Hog1 Catalyt 99.9 1.3E-23 2.8E-28 239.8 15.8 206 263-592 60-298 (328)
465 smart00220 S_TKc Serine/Threon 99.9 1.4E-23 2.9E-28 226.1 14.8 201 264-585 39-244 (244)
466 KOG0668 Casein kinase II, alph 99.9 5.9E-24 1.3E-28 215.2 10.7 206 264-591 84-331 (338)
467 KOG0308 Conserved WD40 repeat- 99.9 3.1E-23 6.8E-28 234.7 17.7 242 784-1048 29-286 (735)
468 KOG0301 Phospholipase A2-activ 99.9 9.6E-23 2.1E-27 232.5 21.7 238 774-1047 9-249 (745)
469 KOG0664 Nemo-like MAPK-related 99.9 1.2E-24 2.7E-29 224.5 5.6 218 259-591 99-352 (449)
470 KOG0289 mRNA splicing factor [ 99.9 6.4E-21 1.4E-25 207.4 34.5 237 780-1046 220-461 (506)
471 KOG0608 Warts/lats-like serine 99.9 3.5E-24 7.6E-29 242.0 9.4 219 305-589 706-935 (1034)
472 KOG0308 Conserved WD40 repeat- 99.9 1.5E-22 3.2E-27 229.3 22.3 320 722-1051 65-397 (735)
473 KOG0647 mRNA export protein (c 99.9 6E-22 1.3E-26 207.1 24.3 257 777-1052 25-286 (347)
474 KOG0296 Angio-associated migra 99.9 1E-21 2.2E-26 210.0 26.2 248 775-1054 60-363 (399)
475 KOG4257 Focal adhesion tyrosin 99.9 1.4E-23 2.9E-28 237.2 12.1 239 222-581 401-644 (974)
476 KOG1036 Mitotic spindle checkp 99.9 1.7E-21 3.6E-26 204.9 26.8 264 731-1036 14-293 (323)
477 PLN03224 probable serine/threo 99.9 1.8E-23 3.9E-28 247.7 13.3 183 303-587 260-505 (507)
478 KOG0269 WD40 repeat-containing 99.9 6.8E-23 1.5E-27 236.0 17.0 231 747-987 103-341 (839)
479 KOG0306 WD40-repeat-containing 99.9 2.2E-21 4.7E-26 222.6 28.7 269 748-1049 338-624 (888)
480 KOG0639 Transducin-like enhanc 99.9 2.1E-22 4.6E-27 221.2 19.6 285 729-1046 418-703 (705)
481 KOG4278 Protein tyrosine kinas 99.9 3.7E-23 8E-28 232.8 13.6 234 223-581 280-518 (1157)
482 KOG0305 Anaphase promoting com 99.9 8E-22 1.7E-26 226.2 24.0 242 729-987 216-462 (484)
483 KOG0299 U3 snoRNP-associated p 99.9 8.5E-22 1.8E-26 216.1 22.9 255 777-1055 140-418 (479)
484 KOG0587 Traf2- and Nck-interac 99.9 2.8E-23 6.2E-28 244.5 12.1 247 219-588 30-288 (953)
485 KOG1006 Mitogen-activated prot 99.9 5.5E-24 1.2E-28 219.9 5.4 204 262-588 113-333 (361)
486 KOG4283 Transcription-coupled 99.9 2.3E-21 5E-26 201.5 24.4 213 777-990 41-280 (397)
487 KOG0300 WD40 repeat-containing 99.9 9.8E-22 2.1E-26 205.4 21.3 222 745-987 125-387 (481)
488 KOG0293 WD40 repeat-containing 99.9 1.4E-21 3.1E-26 210.9 22.7 253 774-1053 219-476 (519)
489 KOG0643 Translation initiation 99.9 1.6E-21 3.5E-26 200.7 21.1 261 715-986 37-317 (327)
490 KOG0269 WD40 repeat-containing 99.9 3.6E-22 7.8E-27 230.1 17.1 247 781-1050 41-299 (839)
491 KOG1094 Discoidin domain recep 99.9 1.1E-22 2.4E-27 229.0 12.7 236 223-581 551-799 (807)
492 KOG0199 ACK and related non-re 99.9 1.5E-22 3.4E-27 231.4 13.8 246 220-589 120-375 (1039)
493 KOG0695 Serine/threonine prote 99.9 4E-23 8.7E-28 218.4 8.4 180 305-589 328-523 (593)
494 KOG0640 mRNA cleavage stimulat 99.9 6.1E-22 1.3E-26 206.8 17.0 255 719-986 161-426 (430)
495 KOG0670 U4/U6-associated splic 99.9 2.4E-23 5.3E-28 231.4 6.0 174 309-587 514-751 (752)
496 KOG0267 Microtubule severing p 99.9 7.1E-23 1.5E-27 234.1 9.7 231 775-1035 24-256 (825)
497 KOG0647 mRNA export protein (c 99.9 1.4E-20 3E-25 197.0 25.5 265 730-1020 27-307 (347)
498 KOG2445 Nuclear pore complex c 99.9 2.8E-20 6E-25 195.1 27.3 258 777-1049 11-320 (361)
499 PLN00113 leucine-rich repeat r 99.9 2.3E-22 5E-27 261.9 12.9 192 263-582 734-947 (968)
500 KOG1407 WD40 repeat protein [F 99.9 4.1E-20 8.9E-25 190.0 26.1 275 726-1038 16-293 (313)
No 1
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=1.5e-72 Score=712.84 Aligned_cols=658 Identities=39% Similarity=0.635 Sum_probs=482.8
Q ss_pred cccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhccccccc
Q 001548 305 RQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESAS 384 (1056)
Q Consensus 305 ~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~ 384 (1056)
+.+.++.+++|+++|+.....++..+++.|++||+.||+|||++||+||||||+||||+..|.+|++|||++...... .
T Consensus 56 ~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~-~ 134 (793)
T PLN00181 56 VRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSD-E 134 (793)
T ss_pred hhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCccccc-c
Confidence 355667788999999876667888899999999999999999999999999999999999999999999998765421 1
Q ss_pred CCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCccccccc
Q 001548 385 LDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTN 464 (1056)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~ 464 (1056)
....+ +.|||.++..........
T Consensus 135 ~~~~k--------------------------------------------------------i~DfG~a~~~~~~~~~~~- 157 (793)
T PLN00181 135 DATTK--------------------------------------------------------SREIGSSRREEILSERRI- 157 (793)
T ss_pred cCccc--------------------------------------------------------ccccccccccccccccch-
Confidence 12233 445555432111000000
Q ss_pred CCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCCCCcHHHHHHHHHhhcc
Q 001548 465 AGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRD 544 (1056)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~f~~~~~~~~~~~~~~~ 544 (1056)
..... ... ...+ ......+||++|||||++.+..|+.++|||||||+||||++++++.......+..+..
T Consensus 158 ~~~~~--------~~~-~~~~-~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~ 227 (793)
T PLN00181 158 EKLEE--------VKK-QPFP-MKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRH 227 (793)
T ss_pred hhhhc--------ccc-CCCc-ccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHH
Confidence 00000 000 0000 0112468999999999999999999999999999999999998777665556666666
Q ss_pred CCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhhhch-hhhhcccCccchHHHHHHHHHHHHHHHHHH
Q 001548 545 RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCA-EELLSSIDQDDSESELLLHFLISLEEEKQN 623 (1056)
Q Consensus 545 ~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~~~~-~~~~~~i~q~d~e~e~l~efL~~l~eqK~e 623 (1056)
..+|+......+...+++.+||++||.+||++.|||+||||........ ......+.+...+.+.+.+++...++++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 307 (793)
T PLN00181 228 RVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEPRENLEEREAAMELRDRIEEQELLLEFLFLIQQRKQE 307 (793)
T ss_pred hhcChhhhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhhhHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 6666665566788899999999999999999999999999987543322 222222333334445566777777788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCccCCCCccc----------ccccccccccc--cccccccchhhHHHH
Q 001548 624 QASKLVGEIRSLEADIKEVERRHYLKKPLVDPSLQNESAPSR----------ENRYFNEQLSS--SEAQLSPISDANEMR 691 (1056)
Q Consensus 624 ~l~kLq~el~~le~Di~evEr~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~--~~~~~~~~~~~~~~r 691 (1056)
+..+++.+++.++.||+++++++.+........ ......+ ++....+.... .......+ .+++|
T Consensus 308 ~~~~~~~~~~~l~~~i~~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l--~~~~~ 383 (793)
T PLN00181 308 AADKLQDTISLLSSDIDQVVKRQLVLQQKGSDV--RSFLASRKRIRQGAETLAAEEENDDNSSKLDDTLESTL--LESSR 383 (793)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhccccccc--ccccccchhhhccccchhhccccccccccccccccccc--hhhhH
Confidence 899999999999999999998765533211110 1110001 00000000000 00011122 34899
Q ss_pred HHHHHHHHHHHHHhhhhccccCCCCCccccc------ccccccc-------cccceeee-cccccCCCCcEEEECCCeEE
Q 001548 692 LMRNLNQLERAYFSMRSQIQLSDSDSTTRAD------NDLLRDR-------ENLFLAQQ-DQEIQNPTDRLGAFFDGLCK 757 (1056)
Q Consensus 692 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~l~gh-------~~~v~~~~-~~~~~~~~~~ls~s~D~~ik 757 (1056)
|+++|++|+++||.++........ .+... .....++ .+.+.... +.....+.+.+.+|++|.++
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~ 461 (793)
T PLN00181 384 LMRNLKKLESVYFATRYRQIKAAA--AAEKPLARYYSALSENGRSSEKSSMSNPAKPPDFYINDSRQGGWIDPFLEGLCK 461 (793)
T ss_pred HHHHHHHHHHHHhhhhhccccccc--cccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence 999999999999999975421100 00000 0000001 00000000 00000112224456799999
Q ss_pred EEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEe
Q 001548 758 YARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWN 837 (1056)
Q Consensus 758 iw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~ 837 (1056)
+|++.+.+....++.+++.+|.+.|++++|+|+|++||||+.|++|+||++............+.....+...|.+++|+
T Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~ 541 (793)
T PLN00181 462 YLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWN 541 (793)
T ss_pred hhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEec
Confidence 99999988888888778889999999999999999999999999999999864322222333445555667889999999
Q ss_pred cCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEeCCCCeE
Q 001548 838 NYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVC 917 (1056)
Q Consensus 838 ~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~~~~~V~ 917 (1056)
+..+.+|++++.||+|++||+.+++.+..+.+|.+.|++++|+|.++.+|+||+.|++|++||++++.++.++.+...|+
T Consensus 542 ~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~~v~ 621 (793)
T PLN00181 542 SYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANIC 621 (793)
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecCCCeE
Confidence 87688999999999999999999999999999999999999997688999999999999999999999999988888999
Q ss_pred EEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEECCCCCCCCCCCCc
Q 001548 918 CVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNA 997 (1056)
Q Consensus 918 sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~ 997 (1056)
++.|++....+|++|+.||.|++||+++.+.++..+.+|...|+++.|.++..|+|++.|++|+|||++.... .....
T Consensus 622 ~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~--~~~~~ 699 (793)
T PLN00181 622 CVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSIS--GINET 699 (793)
T ss_pred EEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEeCCCEEEEEECCCEEEEEeCCCCcc--ccCCc
Confidence 9999765456999999999999999998776678889999999999999888999999999999999974321 11235
Q ss_pred eeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCC
Q 001548 998 CSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWG 1049 (1056)
Q Consensus 998 ~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~ 1049 (1056)
++.++.||.+.+..++ +++++.++++++.|+++++|+...+
T Consensus 700 ~l~~~~gh~~~i~~v~-----------~s~~~~~lasgs~D~~v~iw~~~~~ 740 (793)
T PLN00181 700 PLHSFMGHTNVKNFVG-----------LSVSDGYIATGSETNEVFVYHKAFP 740 (793)
T ss_pred ceEEEcCCCCCeeEEE-----------EcCCCCEEEEEeCCCEEEEEECCCC
Confidence 7889999998887666 7889999999999999999997654
No 2
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=8.6e-39 Score=331.01 Aligned_cols=292 Identities=19% Similarity=0.232 Sum_probs=253.1
Q ss_pred ccccccccccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCc
Q 001548 723 NDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKK 802 (1056)
Q Consensus 723 ~~~l~gh~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg~ 802 (1056)
.++|+||.+.|.+..+ .......+++|.||.+.+||.-+. .+.+.++-.+.+|..++|+|.|+++|.||.|+.
T Consensus 48 rr~LkGH~~Ki~~~~w--s~Dsr~ivSaSqDGklIvWDs~Tt-----nK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~ 120 (343)
T KOG0286|consen 48 RRTLKGHLNKIYAMDW--STDSRRIVSASQDGKLIVWDSFTT-----NKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNK 120 (343)
T ss_pred EEEecccccceeeeEe--cCCcCeEEeeccCCeEEEEEcccc-----cceeEEecCceeEEEEEECCCCCeEEecCcCce
Confidence 4789999999999876 223445679999999999996543 233456678999999999999999999999999
Q ss_pred EEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecC
Q 001548 803 IKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQV 882 (1056)
Q Consensus 803 I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~ 882 (1056)
+.||++.+..++ ..........+|.+.++|+.|-+ .++|+|+|.|.++.+||+++++.+..|.+|.+.|.+++++|.
T Consensus 121 Csiy~ls~~d~~-g~~~v~r~l~gHtgylScC~f~d--D~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~ 197 (343)
T KOG0286|consen 121 CSIYPLSTRDAE-GNVRVSRELAGHTGYLSCCRFLD--DNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPS 197 (343)
T ss_pred eEEEeccccccc-ccceeeeeecCccceeEEEEEcC--CCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCC
Confidence 999999853111 11223344678999999999988 578999999999999999999999999999999999999998
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEec--CCCCC
Q 001548 883 HPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLA--GHEKA 959 (1056)
Q Consensus 883 d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~--gH~~~ 959 (1056)
+++.|+||+-|++.+|||+|.+.++++|. |.+.|++|+|.|+|. -|++||+|+++++||+|.... +..+. .-..+
T Consensus 198 ~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~-afatGSDD~tcRlyDlRaD~~-~a~ys~~~~~~g 275 (343)
T KOG0286|consen 198 DGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGD-AFATGSDDATCRLYDLRADQE-LAVYSHDSIICG 275 (343)
T ss_pred CCCeEEecccccceeeeeccCcceeEeecccccccceEEEccCCC-eeeecCCCceeEEEeecCCcE-EeeeccCcccCC
Confidence 99999999999999999999999999997 778999999999996 899999999999999999776 44443 23457
Q ss_pred eEEEEEc-CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcC
Q 001548 960 VSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFD 1038 (1056)
Q Consensus 960 V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D 1038 (1056)
|++++|+ .+.+|++|..|.++.+||.- +++.+..+.||.|.|.++. .+|||..|+|+|||
T Consensus 276 itSv~FS~SGRlLfagy~d~~c~vWDtl--------k~e~vg~L~GHeNRvScl~-----------~s~DG~av~TgSWD 336 (343)
T KOG0286|consen 276 ITSVAFSKSGRLLFAGYDDFTCNVWDTL--------KGERVGVLAGHENRVSCLG-----------VSPDGMAVATGSWD 336 (343)
T ss_pred ceeEEEcccccEEEeeecCCceeEeecc--------ccceEEEeeccCCeeEEEE-----------ECCCCcEEEecchh
Confidence 9999999 78889999999999999987 5678899999999999998 78999999999999
Q ss_pred CcEEEEe
Q 001548 1039 FTTLSFR 1045 (1056)
Q Consensus 1039 ~~v~iW~ 1045 (1056)
.+++||.
T Consensus 337 s~lriW~ 343 (343)
T KOG0286|consen 337 STLRIWA 343 (343)
T ss_pred HheeecC
Confidence 9999994
No 3
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=3.2e-40 Score=356.14 Aligned_cols=277 Identities=21% Similarity=0.290 Sum_probs=246.1
Q ss_pred cceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCC--CCEEEEEeCCCcEEEEEcC
Q 001548 732 LFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRD--EDHFAAAGVSKKIKIFEFN 809 (1056)
Q Consensus 732 ~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspd--g~~latg~~Dg~I~Iwdl~ 809 (1056)
.+..+.+ ....+-.+++|++|.+|+|...+.....+ |.+|+..|.++.|+|. +..+|||+.||++++|+++
T Consensus 177 Pis~~~f--S~ds~~laT~swsG~~kvW~~~~~~~~~~-----l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~ 249 (459)
T KOG0272|consen 177 PISGCSF--SRDSKHLATGSWSGLVKVWSVPQCNLLQT-----LRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLS 249 (459)
T ss_pred cceeeEe--ecCCCeEEEeecCCceeEeecCCcceeEE-----EeccccceeeEEEccCCCccceeeeccCCceeeeccC
Confidence 4445544 22445567999999999999877644443 5599999999999997 6799999999999999997
Q ss_pred CCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEE
Q 001548 810 ALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLAS 889 (1056)
Q Consensus 810 t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laS 889 (1056)
+. .......+|...|..++|+|+ +.+|+|+++|.+-++||+.++..+...+||...|.+++|++ ||.+++|
T Consensus 250 ~e-------~~l~~l~gH~~RVs~VafHPs-G~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~-DGSL~~t 320 (459)
T KOG0272|consen 250 QE-------TPLQDLEGHLARVSRVAFHPS-GKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQP-DGSLAAT 320 (459)
T ss_pred CC-------cchhhhhcchhhheeeeecCC-CceeeecccccchhhcccccchhhHhhcccccccceeEecC-CCceeec
Confidence 51 223344589999999999999 99999999999999999999998888899999999999999 9999999
Q ss_pred EeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcC-
Q 001548 890 GSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLD- 967 (1056)
Q Consensus 890 gs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs~- 967 (1056)
||.|..-+|||+|++.++..+. |...|.+|+|+|+| +.+||||.|++++|||+|..+. ++++.+|.+-|+.|+|+|
T Consensus 321 GGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNG-y~lATgs~Dnt~kVWDLR~r~~-ly~ipAH~nlVS~Vk~~p~ 398 (459)
T KOG0272|consen 321 GGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNG-YHLATGSSDNTCKVWDLRMRSE-LYTIPAHSNLVSQVKYSPQ 398 (459)
T ss_pred cCccchhheeecccCcEEEEecccccceeeEeECCCc-eEEeecCCCCcEEEeeeccccc-ceecccccchhhheEeccc
Confidence 9999999999999999999987 66789999999999 5999999999999999998776 889999999999999994
Q ss_pred -CCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEe
Q 001548 968 -SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFR 1045 (1056)
Q Consensus 968 -~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~ 1045 (1056)
+.+|+|||.|++++||... +..++.++.||.+.|.++. .++++.+++|+++|.++++|.
T Consensus 399 ~g~fL~TasyD~t~kiWs~~--------~~~~~ksLaGHe~kV~s~D-----------is~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 399 EGYFLVTASYDNTVKIWSTR--------TWSPLKSLAGHEGKVISLD-----------ISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred CCeEEEEcccCcceeeecCC--------CcccchhhcCCccceEEEE-----------eccCCceEEEeccCceeeecc
Confidence 5679999999999999988 5678899999999999988 789999999999999999996
No 4
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=5.7e-39 Score=341.65 Aligned_cols=294 Identities=21% Similarity=0.275 Sum_probs=259.3
Q ss_pred CCCCcccccccccccccccceeeecccccCCCC--cEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcC--
Q 001548 714 DSDSTTRADNDLLRDRENLFLAQQDQEIQNPTD--RLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDR-- 789 (1056)
Q Consensus 714 ~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~~~--~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fsp-- 789 (1056)
-|+-.++.+..+.+||.+||.++++ +|++ +.+|+.||+|++||.++++..+. .|.+|...|.+++|.|
T Consensus 141 ~WD~~TeTp~~t~KgH~~WVlcvaw----sPDgk~iASG~~dg~I~lwdpktg~~~g~----~l~gH~K~It~Lawep~h 212 (480)
T KOG0271|consen 141 LWDLDTETPLFTCKGHKNWVLCVAW----SPDGKKIASGSKDGSIRLWDPKTGQQIGR----ALRGHKKWITALAWEPLH 212 (480)
T ss_pred eeccCCCCcceeecCCccEEEEEEE----CCCcchhhccccCCeEEEecCCCCCcccc----cccCcccceeEEeecccc
Confidence 4677777889999999999999976 5655 45889999999999888776554 3669999999999976
Q ss_pred ---CCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEE
Q 001548 790 ---DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSH 866 (1056)
Q Consensus 790 ---dg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~ 866 (1056)
...+||+++.||+|+|||+.. ........+|+..|+|++|-. ..+++|||.|++|++|+...|.++++
T Consensus 213 l~p~~r~las~skDg~vrIWd~~~-------~~~~~~lsgHT~~VTCvrwGG--~gliySgS~DrtIkvw~a~dG~~~r~ 283 (480)
T KOG0271|consen 213 LVPPCRRLASSSKDGSVRIWDTKL-------GTCVRTLSGHTASVTCVRWGG--EGLIYSGSQDRTIKVWRALDGKLCRE 283 (480)
T ss_pred cCCCccceecccCCCCEEEEEccC-------ceEEEEeccCccceEEEEEcC--CceEEecCCCceEEEEEccchhHHHh
Confidence 577999999999999999873 345566779999999999986 57999999999999999999999999
Q ss_pred EecCCCcEEEEEEec-----------------------------------CCCCEEEEEeCCCcEEEEECCCCc-eeEEE
Q 001548 867 YIEHEKRAWSVDFSQ-----------------------------------VHPTKLASGSDDCSVKLWNINEKN-SLATI 910 (1056)
Q Consensus 867 ~~~H~~~V~sv~fsp-----------------------------------~d~~~laSgs~Dg~V~IWDlr~~~-~~~~~ 910 (1056)
+++|...|+.++.+. +.+..|+|||+|.++.+|+-...+ ++...
T Consensus 284 lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rm 363 (480)
T KOG0271|consen 284 LKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRM 363 (480)
T ss_pred hcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhh
Confidence 999999999999872 123469999999999999976544 55444
Q ss_pred -eCCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEECCCC
Q 001548 911 -KNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRT 988 (1056)
Q Consensus 911 -~~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~ 988 (1056)
.|..-|+.|.|+|++. ++|++|.|..|++||.++++. +.+|.||-.+|+.++|+ +..+|+|||.|.+||+||++
T Consensus 364 tgHq~lVn~V~fSPd~r-~IASaSFDkSVkLW~g~tGk~-lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~-- 439 (480)
T KOG0271|consen 364 TGHQALVNHVSFSPDGR-YIASASFDKSVKLWDGRTGKF-LASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVR-- 439 (480)
T ss_pred hchhhheeeEEECCCcc-EEEEeecccceeeeeCCCcch-hhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEee--
Confidence 4778899999999996 999999999999999999987 78999999999999999 88899999999999999999
Q ss_pred CCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEe
Q 001548 989 SHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFR 1045 (1056)
Q Consensus 989 ~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~ 1045 (1056)
+.+....+.||.++|.++. |+|||..+++++.|.-+++|.
T Consensus 440 ------tkKl~~DLpGh~DEVf~vD-----------wspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 440 ------TKKLKQDLPGHADEVFAVD-----------WSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred ------eeeecccCCCCCceEEEEE-----------ecCCCceeecCCCceEEEeec
Confidence 5677889999999999888 999999999999999999995
No 5
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.4e-38 Score=338.62 Aligned_cols=299 Identities=18% Similarity=0.245 Sum_probs=261.5
Q ss_pred cccccccccccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCC
Q 001548 722 DNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSK 801 (1056)
Q Consensus 722 ~~~~l~gh~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg 801 (1056)
....+.||...|.+++|. .......+|+-|.++++||..+-.+..+.+ +|.++|.|++|+|||+.||+|+.||
T Consensus 107 CssS~~GH~e~Vl~~~fs--p~g~~l~tGsGD~TvR~WD~~TeTp~~t~K-----gH~~WVlcvawsPDgk~iASG~~dg 179 (480)
T KOG0271|consen 107 CSSSIAGHGEAVLSVQFS--PTGSRLVTGSGDTTVRLWDLDTETPLFTCK-----GHKNWVLCVAWSPDGKKIASGSKDG 179 (480)
T ss_pred eccccCCCCCcEEEEEec--CCCceEEecCCCceEEeeccCCCCcceeec-----CCccEEEEEEECCCcchhhccccCC
Confidence 345688999999999882 233455689999999999998766655554 9999999999999999999999999
Q ss_pred cEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCC----CCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEE
Q 001548 802 KIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI----KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSV 877 (1056)
Q Consensus 802 ~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~----~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv 877 (1056)
+|++||..+ .........+|+..|++++|.|.+ ..+||+++.||+|+|||+..++++..+.+|+..|+||
T Consensus 180 ~I~lwdpkt------g~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCv 253 (480)
T KOG0271|consen 180 SIRLWDPKT------GQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCV 253 (480)
T ss_pred eEEEecCCC------CCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEE
Confidence 999999876 344555677999999999998743 5689999999999999999999999999999999999
Q ss_pred EEecCCCCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEc-----------cCCCc------------------
Q 001548 878 DFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFS-----------AHSSH------------------ 927 (1056)
Q Consensus 878 ~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fs-----------p~~~~------------------ 927 (1056)
.|-- ..+|+|||.|++|++|+...|.+...++ |...|+.++++ |.+..
T Consensus 254 rwGG--~gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~ 331 (480)
T KOG0271|consen 254 RWGG--EGLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAV 331 (480)
T ss_pred EEcC--CceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHh
Confidence 9974 5689999999999999999999988887 55678877766 33332
Q ss_pred ------EEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeE
Q 001548 928 ------LLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSL 1000 (1056)
Q Consensus 928 ------~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~ 1000 (1056)
.+++||+|+++.+|+-...+.|+..+.||..-|+.+.|+ ++.+|+|||.|..||+||-+ +|..+.
T Consensus 332 ~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~--------tGk~la 403 (480)
T KOG0271|consen 332 LKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGR--------TGKFLA 403 (480)
T ss_pred hccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCC--------Ccchhh
Confidence 599999999999999988888899999999999999999 66779999999999999998 778899
Q ss_pred EecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCCeEEEE
Q 001548 1001 TFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWGCLLLM 1054 (1056)
Q Consensus 1001 ~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~~~~~~ 1054 (1056)
+|.||.+.|+-++ |+.|.+.|++|+.|.|+++|++....+...
T Consensus 404 sfRGHv~~VYqva-----------wsaDsRLlVS~SkDsTLKvw~V~tkKl~~D 446 (480)
T KOG0271|consen 404 SFRGHVAAVYQVA-----------WSADSRLLVSGSKDSTLKVWDVRTKKLKQD 446 (480)
T ss_pred hhhhccceeEEEE-----------eccCccEEEEcCCCceEEEEEeeeeeeccc
Confidence 9999999998888 999999999999999999999998877543
No 6
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=3.2e-37 Score=332.95 Aligned_cols=247 Identities=27% Similarity=0.376 Sum_probs=224.9
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecC-CCCEEEEEECCCcEEE
Q 001548 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNY-IKNYLASADYDGVVKL 855 (1056)
Q Consensus 777 ~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~-~~~~LaSgs~Dg~V~l 855 (1056)
+.+.+|..+.|+++++.||||+.+|.++||+... ......+.+|.+.|.++.|+|. .+..+|||+.||+|++
T Consensus 173 gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~-------~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvkl 245 (459)
T KOG0272|consen 173 GDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQ-------CNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKL 245 (459)
T ss_pred cCCCcceeeEeecCCCeEEEeecCCceeEeecCC-------cceeEEEeccccceeeEEEccCCCccceeeeccCCceee
Confidence 6678999999999999999999999999999874 3455677899999999999998 4779999999999999
Q ss_pred EEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEEEeC
Q 001548 856 WDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSA 934 (1056)
Q Consensus 856 WD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~lasGs~ 934 (1056)
|++.+..++..+++|..+|..|+|+| +|.+|+|+|.|.+-++||++++..+.... |...|.+++|+|+|. ++++|+.
T Consensus 246 w~~~~e~~l~~l~gH~~RVs~VafHP-sG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGS-L~~tGGl 323 (459)
T KOG0272|consen 246 WKLSQETPLQDLEGHLARVSRVAFHP-SGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGS-LAATGGL 323 (459)
T ss_pred eccCCCcchhhhhcchhhheeeeecC-CCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCc-eeeccCc
Confidence 99999999999999999999999999 99999999999999999999998766555 677899999999998 9999999
Q ss_pred CCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCCE-EEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEE
Q 001548 935 DYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGT-LVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGIC 1013 (1056)
Q Consensus 935 Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs~~~~-L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls 1013 (1056)
|..-+|||+|++++ +.++.||.+.|.+|.|+|+++ |+|||.|+++||||++ ...++.++.+|++.|..+.
T Consensus 324 D~~~RvWDlRtgr~-im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR--------~r~~ly~ipAH~nlVS~Vk 394 (459)
T KOG0272|consen 324 DSLGRVWDLRTGRC-IMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLR--------MRSELYTIPAHSNLVSQVK 394 (459)
T ss_pred cchhheeecccCcE-EEEecccccceeeEeECCCceEEeecCCCCcEEEeeec--------ccccceecccccchhhheE
Confidence 99999999999998 788999999999999997665 9999999999999999 4466899999999997777
Q ss_pred ecCCcceeeEEeeC-CCCEEEEEEcCCcEEEEeCCCCeEE
Q 001548 1014 RLEHNLFPFTIFNL-SDCWLLLVCFDFTTLSFRTSWGCLL 1052 (1056)
Q Consensus 1014 ~~~~~~~~~~~~s~-~g~~l~s~s~D~~v~iW~v~~~~~~ 1052 (1056)
++| .|.+|+|+|+|.+++||....+..+
T Consensus 395 -----------~~p~~g~fL~TasyD~t~kiWs~~~~~~~ 423 (459)
T KOG0272|consen 395 -----------YSPQEGYFLVTASYDNTVKIWSTRTWSPL 423 (459)
T ss_pred -----------ecccCCeEEEEcccCcceeeecCCCcccc
Confidence 565 7889999999999999998776554
No 7
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-38 Score=346.28 Aligned_cols=264 Identities=17% Similarity=0.156 Sum_probs=188.6
Q ss_pred cCCchhHHHhhhcc--ccceeeeCCCCCcccccccc-ccccccccccCCchhHHH-HhhhhhhccCCCCCCCcccceeee
Q 001548 208 KSGFSEFFVKTTLK--GKGIVCRGPPLNAFKERRGM-IDTKAFVTTTMPSDAALK-AAGAMMVASNASPKPVGVGTAVVS 283 (1056)
Q Consensus 208 ~~~~~~~~~k~~~~--g~Gvv~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 283 (1056)
++-+..|.+-++|+ ++|+|-++......+..-.- +..++.....-..+-.+. -....+|..+.|||||.+.+-...
T Consensus 168 ks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~ 247 (475)
T KOG0615|consen 168 KSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEV 247 (475)
T ss_pred chhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeec
Confidence 33344566666665 67999888763322220000 001111110100000111 112447889999999986655332
Q ss_pred cCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEc
Q 001548 284 NGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL 363 (1056)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~ 363 (1056)
.... ..+|||++||+|.+++-..+. +.+...+.+|+||+.||.|||++||+||||||+|||+.
T Consensus 248 ~ds~----------------YmVlE~v~GGeLfd~vv~nk~-l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~ 310 (475)
T KOG0615|consen 248 PDSS----------------YMVLEYVEGGELFDKVVANKY-LREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLS 310 (475)
T ss_pred CCce----------------EEEEEEecCccHHHHHHhccc-cccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEec
Confidence 1111 138999999999999977665 45558999999999999999999999999999999998
Q ss_pred cC---CcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccc
Q 001548 364 QS---NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIET 440 (1056)
Q Consensus 364 ~~---~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (1056)
.+ ..+||+|||+|+..++.
T Consensus 311 ~~~e~~llKItDFGlAK~~g~~---------------------------------------------------------- 332 (475)
T KOG0615|consen 311 NDAEDCLLKITDFGLAKVSGEG---------------------------------------------------------- 332 (475)
T ss_pred cCCcceEEEecccchhhccccc----------------------------------------------------------
Confidence 76 77999999999886520
Q ss_pred cccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCC---CccchhHH
Q 001548 441 ANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVC---TTSSNIYS 517 (1056)
Q Consensus 441 ~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~---t~~sDIwS 517 (1056)
..+.+.||||.|.|||++....+ ..++||||
T Consensus 333 ----------------------------------------------sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWS 366 (475)
T KOG0615|consen 333 ----------------------------------------------SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWS 366 (475)
T ss_pred ----------------------------------------------eehhhhcCCccccChhheecCCeecccchheeee
Confidence 11237899999999999998553 45899999
Q ss_pred HHHHHHHHhCCCCcHHHHHH------HHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhhh
Q 001548 518 LGVLFFELFGRFDSERALAA------AMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (1056)
Q Consensus 518 LGvlL~eLlt~f~~~~~~~~------~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~~ 591 (1056)
|||+||-+|+|++++..... .+..-+....|+.+...+.+..+||.|||..||++|||+.|+|+||||...+..
T Consensus 367 lGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~~ 446 (475)
T KOG0615|consen 367 LGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPCL 446 (475)
T ss_pred ccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccccc
Confidence 99999999998777644322 222223345578888999999999999999999999999999999999976543
Q ss_pred c
Q 001548 592 C 592 (1056)
Q Consensus 592 ~ 592 (1056)
.
T Consensus 447 s 447 (475)
T KOG0615|consen 447 S 447 (475)
T ss_pred c
Confidence 3
No 8
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=4.1e-36 Score=311.14 Aligned_cols=286 Identities=23% Similarity=0.315 Sum_probs=246.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhhhccccC--------CCCCcccccccccccccccceeeecccccCCCCcE--EEECC
Q 001548 684 ISDANEMRLMRNLNQLERAYFSMRSQIQLS--------DSDSTTRADNDLLRDRENLFLAQQDQEIQNPTDRL--GAFFD 753 (1056)
Q Consensus 684 ~~~~~~~rl~~~~~~l~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~~~~l--s~s~D 753 (1056)
+..+.|+.|.+|++++....|...++..++ .|+.-+....+.++....||.+++| +|++.. .|..|
T Consensus 43 i~~~~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~----sPSg~~VAcGGLd 118 (343)
T KOG0286|consen 43 IQMRTRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAY----SPSGNFVACGGLD 118 (343)
T ss_pred eeeeeEEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEE----CCCCCeEEecCcC
Confidence 345566889999999999888877764333 4677777788899999999999998 455554 66789
Q ss_pred CeEEEEEccCceEEeEEE-eeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeE
Q 001548 754 GLCKYARYSKFEVQGMLR-TGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLS 832 (1056)
Q Consensus 754 ~~ikiw~~~~~~~~~~l~-~~~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~ 832 (1056)
+.|.|++++..+..+..+ ...+.+|++.+.|+.|-+ ...|+|++.|.++-+||+++ ......+.+|.+.|.
T Consensus 119 N~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~d-D~~ilT~SGD~TCalWDie~-------g~~~~~f~GH~gDV~ 190 (343)
T KOG0286|consen 119 NKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLD-DNHILTGSGDMTCALWDIET-------GQQTQVFHGHTGDVM 190 (343)
T ss_pred ceeEEEecccccccccceeeeeecCccceeEEEEEcC-CCceEecCCCceEEEEEccc-------ceEEEEecCCcccEE
Confidence 999999998653332222 236889999999999987 56788999999999999986 345566779999999
Q ss_pred EEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEeC
Q 001548 833 CVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKN 912 (1056)
Q Consensus 833 ~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~~ 912 (1056)
+|++.|...+.++||+.|++.+|||++.+.++++|.+|+..|++|.|.| +|.-|+|||+|+++++||+|..+.+..+.+
T Consensus 191 slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP-~G~afatGSDD~tcRlyDlRaD~~~a~ys~ 269 (343)
T KOG0286|consen 191 SLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFP-SGDAFATGSDDATCRLYDLRADQELAVYSH 269 (343)
T ss_pred EEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEcc-CCCeeeecCCCceeEEEeecCCcEEeeecc
Confidence 9999995599999999999999999999999999999999999999999 999999999999999999999999999985
Q ss_pred C---CCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCC-EEEEEECCCeEEEEE
Q 001548 913 I---ANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSG-TLVTASTDNKLKLWD 984 (1056)
Q Consensus 913 ~---~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs~~~-~L~SgS~Dg~IkiWd 984 (1056)
. .+|++|+|+..|. +|++|..|.++.+||.-..+. +..+.||++.|++|..+|++ .++|||+|.+||||.
T Consensus 270 ~~~~~gitSv~FS~SGR-lLfagy~d~~c~vWDtlk~e~-vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 270 DSIICGITSVAFSKSGR-LLFAGYDDFTCNVWDTLKGER-VGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred CcccCCceeEEEccccc-EEEeeecCCceeEeeccccce-EEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 4 5799999999996 888899999999999988776 78999999999999999554 599999999999994
No 9
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-36 Score=329.31 Aligned_cols=206 Identities=23% Similarity=0.279 Sum_probs=170.2
Q ss_pred hhhhccCCCCCCCcccceeeecCC-CCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGS-LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~g 341 (1056)
...+++-.+|+||..-.+...+.. .. +.|||++||+|.++++..++ +++...-.|+++|+.|
T Consensus 128 l~il~~~~spyIV~~ygaF~~~~~~is----------------I~mEYMDgGSLd~~~k~~g~-i~E~~L~~ia~~VL~G 190 (364)
T KOG0581|consen 128 LEILRSCQSPYIVGFYGAFYSNGEEIS----------------ICMEYMDGGSLDDILKRVGR-IPEPVLGKIARAVLRG 190 (364)
T ss_pred HHHHhhCCCCCeeeEeEEEEeCCceEE----------------eehhhcCCCCHHHHHhhcCC-CCHHHHHHHHHHHHHH
Confidence 345677799999987666555543 22 48999999999999988765 5666899999999999
Q ss_pred HHHhhh-cCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccc
Q 001548 342 VDYHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (1056)
Q Consensus 342 L~ylHs-~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 420 (1056)
|.|||. ++||||||||+|||+...|+|||||||.++.+..+
T Consensus 191 L~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS-------------------------------------- 232 (364)
T KOG0581|consen 191 LSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS-------------------------------------- 232 (364)
T ss_pred HHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh--------------------------------------
Confidence 999995 99999999999999999999999999999876521
Q ss_pred ccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccC
Q 001548 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (1056)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 500 (1056)
...+.+||..|||
T Consensus 233 -------------------------------------------------------------------~a~tfvGT~~YMs 245 (364)
T KOG0581|consen 233 -------------------------------------------------------------------IANTFVGTSAYMS 245 (364)
T ss_pred -------------------------------------------------------------------hcccccccccccC
Confidence 0117899999999
Q ss_pred cccccCCCCCccchhHHHHHHHHHHhCC---CCc----HHHHHHHHHhhccCCCCCCCCC-CChhHHHHHHhccccCCCC
Q 001548 501 PEELSGGVCTTSSNIYSLGVLFFELFGR---FDS----ERALAAAMSDLRDRILPPSFLS-ENPKEAGFCLWQLHPEPLS 572 (1056)
Q Consensus 501 PE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~----~~~~~~~~~~~~~~~lp~~~~~-~~~~~~~li~~lL~~dP~~ 572 (1056)
||.+.+..|+.++||||||++++||..| |.+ .......+..+.....|..... .++++++|+..||++||.+
T Consensus 246 PERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~ 325 (364)
T KOG0581|consen 246 PERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSE 325 (364)
T ss_pred hhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCccc
Confidence 9999999999999999999999999976 333 2345556666666555544444 8999999999999999999
Q ss_pred CCCHHHHhhhhhhhhhhh
Q 001548 573 RPTTREILQSEVTNEFQE 590 (1056)
Q Consensus 573 Rpt~~eil~~~~~~~~~~ 590 (1056)
||++.|+++|||+.....
T Consensus 326 R~s~~qLl~Hpfi~~~~~ 343 (364)
T KOG0581|consen 326 RPSAKQLLQHPFIKKFED 343 (364)
T ss_pred CCCHHHHhcCHHHhhccc
Confidence 999999999999987543
No 10
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-36 Score=334.64 Aligned_cols=255 Identities=17% Similarity=0.210 Sum_probs=196.7
Q ss_pred hHHHhhhcc-c-cceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCC-CCCCCcccceeeecCCCCC
Q 001548 213 EFFVKTTLK-G-KGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNA-SPKPVGVGTAVVSNGSLDL 289 (1056)
Q Consensus 213 ~~~~k~~~~-g-~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 289 (1056)
-|.+.+.++ | +|.||+++.- .-.+.++.+..++.-..-+.......++.++... ||||+.+..+...+....
T Consensus 11 RY~~i~klGDGTfGsV~la~~~----~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L- 85 (538)
T KOG0661|consen 11 RYTVIRKLGDGTFGSVYLAKSK----ETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRIL- 85 (538)
T ss_pred HHHHHHHhcCCcceeEEEeeec----CCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceE-
Confidence 388888887 4 5999999872 1122344444433333444444455555566555 999999887755433221
Q ss_pred CcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEE
Q 001548 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1056)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vk 369 (1056)
. +..+|...+|.++|+.+++.+++..++.|++||+.||+|+|.+|+.||||||+|||+.....||
T Consensus 86 ------~---------fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iK 150 (538)
T KOG0661|consen 86 ------Y---------FVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIK 150 (538)
T ss_pred ------e---------eeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeE
Confidence 1 3335667799999999999999999999999999999999999999999999999999899999
Q ss_pred EeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCccccccccccccc
Q 001548 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1056)
Q Consensus 370 l~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~ 449 (1056)
|+||||||....
T Consensus 151 iaDFGLARev~S-------------------------------------------------------------------- 162 (538)
T KOG0661|consen 151 IADFGLAREVRS-------------------------------------------------------------------- 162 (538)
T ss_pred eccccccccccc--------------------------------------------------------------------
Confidence 999999998651
Q ss_pred CCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccC-CCCCccchhHHHHHHHHHHhC-
Q 001548 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFG- 527 (1056)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~t~~sDIwSLGvlL~eLlt- 527 (1056)
...+|.++-|+||+|||+|.. +.|+.++||||+||+++|+.+
T Consensus 163 ------------------------------------kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sL 206 (538)
T KOG0661|consen 163 ------------------------------------KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSL 206 (538)
T ss_pred ------------------------------------CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHh
Confidence 123568899999999999987 568999999999999999985
Q ss_pred -C-CCcHHHHHHHHHhhccC--------------------CCC--------CCCCCCChhHHHHHHhccccCCCCCCCHH
Q 001548 528 -R-FDSERALAAAMSDLRDR--------------------ILP--------PSFLSENPKEAGFCLWQLHPEPLSRPTTR 577 (1056)
Q Consensus 528 -~-f~~~~~~~~~~~~~~~~--------------------~lp--------~~~~~~~~~~~~li~~lL~~dP~~Rpt~~ 577 (1056)
+ |++..+..+..+++.-- .+| ...+..++++..||..||.+||.+||||.
T Consensus 207 rPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~ 286 (538)
T KOG0661|consen 207 RPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTAS 286 (538)
T ss_pred cccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHH
Confidence 3 88887777776554321 111 12346778899999999999999999999
Q ss_pred HHhhhhhhhhhhhh
Q 001548 578 EILQSEVTNEFQEV 591 (1056)
Q Consensus 578 eil~~~~~~~~~~~ 591 (1056)
|+|+||||+.....
T Consensus 287 ~al~~pffq~~~~~ 300 (538)
T KOG0661|consen 287 QALQHPFFQVGRAS 300 (538)
T ss_pred HHhcCccccccccc
Confidence 99999999876443
No 11
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.6e-36 Score=318.80 Aligned_cols=264 Identities=17% Similarity=0.163 Sum_probs=202.4
Q ss_pred CCchhHHHhhhc--cccceeeeCCCCCcccccccccccccc-------ccccCCchhHHHHhhhhhhccCCCCCCCcccc
Q 001548 209 SGFSEFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAF-------VTTTMPSDAALKAAGAMMVASNASPKPVGVGT 279 (1056)
Q Consensus 209 ~~~~~~~~k~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (1056)
.+..+|-.-+.- +-.|+||||... .....+|. -..+||..+.|++. ++.+..|||||.|..
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk-------~t~eIVALKr~kmekek~GFPItsLREIn---iLl~~~H~NIV~vkE 142 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDK-------KTDEIVALKRLKMEKEKEGFPITSLREIN---ILLKARHPNIVEVKE 142 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccC-------CcceeEEeeecccccccCCCcchhHHHHH---HHHhcCCCCeeeeEE
Confidence 355677654443 356999999872 22222222 24457777666665 666777999999998
Q ss_pred eeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCC
Q 001548 280 AVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSS 359 (1056)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~N 359 (1056)
+++-...- .+| .+|+||+- +|+.+|......+...+++.++.|+|.||.|||.+.|+||||||+|
T Consensus 143 VVvG~~~d---------~iy-----~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SN 207 (419)
T KOG0663|consen 143 VVVGSNMD---------KIY-----IVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSN 207 (419)
T ss_pred EEeccccc---------eee-----eeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhh
Confidence 87743222 222 37888875 8999998887778888999999999999999999999999999999
Q ss_pred EEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCccc
Q 001548 360 FKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIE 439 (1056)
Q Consensus 360 ILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (1056)
+|+...|.+||+||||||..++
T Consensus 208 LLm~~~G~lKiaDFGLAR~ygs---------------------------------------------------------- 229 (419)
T KOG0663|consen 208 LLLSHKGILKIADFGLAREYGS---------------------------------------------------------- 229 (419)
T ss_pred eeeccCCcEEecccchhhhhcC----------------------------------------------------------
Confidence 9999999999999999999773
Q ss_pred ccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccC-CCCCccchhHHH
Q 001548 440 TANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSL 518 (1056)
Q Consensus 440 ~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~t~~sDIwSL 518 (1056)
|...+|..+-|.||+|||++.| ..|++++|+||+
T Consensus 230 ---------------------------------------------p~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSv 264 (419)
T KOG0663|consen 230 ---------------------------------------------PLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSV 264 (419)
T ss_pred ---------------------------------------------CcccCcceEEEeeecCHHHhcCCcccCcchhhhhH
Confidence 2234567899999999999999 459999999999
Q ss_pred HHHHHHHhCC---CCcHHHHHHHHHhhccC------CCC----------------------CCCCC--CChhHHHHHHhc
Q 001548 519 GVLFFELFGR---FDSERALAAAMSDLRDR------ILP----------------------PSFLS--ENPKEAGFCLWQ 565 (1056)
Q Consensus 519 GvlL~eLlt~---f~~~~~~~~~~~~~~~~------~lp----------------------~~~~~--~~~~~~~li~~l 565 (1056)
|||+.||+.+ |++..+..+...+++.- ++| ..|.. .+....+|+..+
T Consensus 265 GCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~l 344 (419)
T KOG0663|consen 265 GCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKL 344 (419)
T ss_pred HHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHH
Confidence 9999999975 77776666665544321 111 11222 336678999999
Q ss_pred cccCCCCCCCHHHHhhhhhhhhhhhhchhhhhccc
Q 001548 566 LHPEPLSRPTTREILQSEVTNEFQEVCAEELLSSI 600 (1056)
Q Consensus 566 L~~dP~~Rpt~~eil~~~~~~~~~~~~~~~~~~~i 600 (1056)
|.+||.+|.||.|.|+|+||.+.+.+......+.+
T Consensus 345 lt~dP~kR~tA~~~L~h~~F~e~P~p~~P~~~Pt~ 379 (419)
T KOG0663|consen 345 LTYDPGKRITAEDGLKHEYFRETPLPIDPSMFPTW 379 (419)
T ss_pred hccCccccccHHHhhcccccccCCCCCChhhcCCC
Confidence 99999999999999999999998776664444443
No 12
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=4.2e-36 Score=314.31 Aligned_cols=244 Identities=16% Similarity=0.190 Sum_probs=184.8
Q ss_pred hhhccccceeeeCCCCCccccccccccc---cccccccCCchhHHHH---hhhhhhccCCCCCCCcccceeeecCCCCCC
Q 001548 217 KTTLKGKGIVCRGPPLNAFKERRGMIDT---KAFVTTTMPSDAALKA---AGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1056)
Q Consensus 217 k~~~~g~Gvv~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1056)
|..-+..|||||.+. +...|. +.++. -+.|...++ ...+++...+|||+|+++.+..-.....
T Consensus 9 kvGEGSYGvV~KCrn-------k~TgqIVAIKkF~E--sedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklh-- 77 (396)
T KOG0593|consen 9 KVGEGSYGVVMKCRN-------KDTGQIVAIKKFVE--SEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLH-- 77 (396)
T ss_pred ccccCcceEEEEecc-------CCcccEEEEEeecc--CCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeE--
Confidence 444456799999987 333333 22322 122233333 3356788999999999988865444433
Q ss_pred cCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEE
Q 001548 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1056)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl 370 (1056)
.+.|||+-.=|.+ |+.....++...++.|++|++.|+.|||++++|||||||+||||+.+|.+|+
T Consensus 78 --------------LVFE~~dhTvL~e-Le~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKL 142 (396)
T KOG0593|consen 78 --------------LVFEYCDHTVLHE-LERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKL 142 (396)
T ss_pred --------------EEeeecchHHHHH-HHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEe
Confidence 2667787755554 5555555777799999999999999999999999999999999999999999
Q ss_pred eCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccC
Q 001548 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1056)
Q Consensus 371 ~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g 450 (1056)
||||.||.+.++
T Consensus 143 CDFGFAR~L~~p-------------------------------------------------------------------- 154 (396)
T KOG0593|consen 143 CDFGFARTLSAP-------------------------------------------------------------------- 154 (396)
T ss_pred ccchhhHhhcCC--------------------------------------------------------------------
Confidence 999999887632
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccC-CCCCccchhHHHHHHHHHHhCC-
Q 001548 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR- 528 (1056)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~t~~sDIwSLGvlL~eLlt~- 528 (1056)
...+|.++-|.||+|||++.| ..|+.++||||+||++.||++|
T Consensus 155 -----------------------------------gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~ 199 (396)
T KOG0593|consen 155 -----------------------------------GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGE 199 (396)
T ss_pred -----------------------------------cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCC
Confidence 123458899999999999999 7799999999999999999997
Q ss_pred --CCcHHHHHHHHHhhcc-C-------------------CCC---------CCCCCCChhHHHHHHhccccCCCCCCCHH
Q 001548 529 --FDSERALAAAMSDLRD-R-------------------ILP---------PSFLSENPKEAGFCLWQLHPEPLSRPTTR 577 (1056)
Q Consensus 529 --f~~~~~~~~~~~~~~~-~-------------------~lp---------~~~~~~~~~~~~li~~lL~~dP~~Rpt~~ 577 (1056)
|++..+..+...+.+. + .+| ..++..+.-..+|+..||+.||.+|++.+
T Consensus 200 pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~ 279 (396)
T KOG0593|consen 200 PLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCE 279 (396)
T ss_pred cCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHH
Confidence 7777666665443321 0 111 22445666678999999999999999999
Q ss_pred HHhhhhhhhhhh
Q 001548 578 EILQSEVTNEFQ 589 (1056)
Q Consensus 578 eil~~~~~~~~~ 589 (1056)
++|.|+||....
T Consensus 280 qll~H~yFd~~~ 291 (396)
T KOG0593|consen 280 QLLHHPYFDGFI 291 (396)
T ss_pred HHhcChHHHHHH
Confidence 999999996653
No 13
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-33 Score=288.23 Aligned_cols=296 Identities=16% Similarity=0.193 Sum_probs=244.9
Q ss_pred cccccccccccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCC
Q 001548 722 DNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSK 801 (1056)
Q Consensus 722 ~~~~l~gh~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg 801 (1056)
...+|++|.++|.+.+... ..++..++++.|.++.+|++..-+...-.....+.||+..|..+..+++|+++++++.|+
T Consensus 7 l~~tl~gh~d~Vt~la~~~-~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~ 85 (315)
T KOG0279|consen 7 LRGTLEGHTDWVTALAIKI-KNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDG 85 (315)
T ss_pred eeeeecCCCceEEEEEeec-CCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccc
Confidence 3567899999999888743 367777899999999999987654433222235789999999999999999999999999
Q ss_pred cEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecC--CCcEEEEEE
Q 001548 802 KIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEH--EKRAWSVDF 879 (1056)
Q Consensus 802 ~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H--~~~V~sv~f 879 (1056)
++++||+.+ ......+.+|...|.+++|+++ ..+++|||.|.+|++|++.. .+..+...+ .+.|+||.|
T Consensus 86 ~lrlWDl~~-------g~~t~~f~GH~~dVlsva~s~d-n~qivSGSrDkTiklwnt~g-~ck~t~~~~~~~~WVscvrf 156 (315)
T KOG0279|consen 86 TLRLWDLAT-------GESTRRFVGHTKDVLSVAFSTD-NRQIVSGSRDKTIKLWNTLG-VCKYTIHEDSHREWVSCVRF 156 (315)
T ss_pred eEEEEEecC-------CcEEEEEEecCCceEEEEecCC-CceeecCCCcceeeeeeecc-cEEEEEecCCCcCcEEEEEE
Confidence 999999985 2444567799999999999999 88999999999999999964 455555444 688999999
Q ss_pred ecCC-CCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCC
Q 001548 880 SQVH-PTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHE 957 (1056)
Q Consensus 880 sp~d-~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~ 957 (1056)
+|.. ..+|+++|.|++|++||+++-+...++. |.+.++.+.++|||. ++++|+.||.+.+||++.++. ++.+ +|.
T Consensus 157 sP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGs-lcasGgkdg~~~LwdL~~~k~-lysl-~a~ 233 (315)
T KOG0279|consen 157 SPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGS-LCASGGKDGEAMLWDLNEGKN-LYSL-EAF 233 (315)
T ss_pred cCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCC-EEecCCCCceEEEEEccCCce-eEec-cCC
Confidence 9942 6789999999999999999988877775 678899999999997 999999999999999999887 4444 578
Q ss_pred CCeEEEEEcCCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEec----CCCC---cEEEEEecCCcceeeEEeeCCCC
Q 001548 958 KAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFS----GHTN---EKVGICRLEHNLFPFTIFNLSDC 1030 (1056)
Q Consensus 958 ~~V~~l~fs~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~----gH~~---~Vv~ls~~~~~~~~~~~~s~~g~ 1030 (1056)
..|.+++|+|..+-+.+..+..|+|||+. ++.++.++. |.+. .+.+++ ..|+++|.
T Consensus 234 ~~v~sl~fspnrywL~~at~~sIkIwdl~--------~~~~v~~l~~d~~g~s~~~~~~~cls---------laws~dG~ 296 (315)
T KOG0279|consen 234 DIVNSLCFSPNRYWLCAATATSIKIWDLE--------SKAVVEELKLDGIGPSSKAGDPICLS---------LAWSADGQ 296 (315)
T ss_pred CeEeeEEecCCceeEeeccCCceEEEecc--------chhhhhhccccccccccccCCcEEEE---------EEEcCCCc
Confidence 99999999999998888889999999998 445555543 2211 222333 34999999
Q ss_pred EEEEEEcCCcEEEEeCC
Q 001548 1031 WLLLVCFDFTTLSFRTS 1047 (1056)
Q Consensus 1031 ~l~s~s~D~~v~iW~v~ 1047 (1056)
.|.++-.|+.|++|.+.
T Consensus 297 tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 297 TLFAGYTDNVIRVWQVA 313 (315)
T ss_pred EEEeeecCCcEEEEEee
Confidence 99999999999999875
No 14
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.7e-35 Score=304.13 Aligned_cols=251 Identities=16% Similarity=0.168 Sum_probs=194.2
Q ss_pred ccceeeeCCCCCccccccccccc--cccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCccc
Q 001548 222 GKGIVCRGPPLNAFKERRGMIDT--KAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1056)
Q Consensus 222 g~Gvv~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1056)
-.|+||+|... ....+.++.. ..+..+.+...+.|+++ .+...+|+||+.++++.....+..
T Consensus 14 ~~gvVyka~d~--~t~~~VAIKKIkl~~~kdGi~~talREIK---~Lqel~h~nIi~LiD~F~~~~~l~----------- 77 (318)
T KOG0659|consen 14 TYGVVYKARDT--ETGKRVAIKKIKLGNAKDGINRTALREIK---LLQELKHPNIIELIDVFPHKSNLS----------- 77 (318)
T ss_pred ceEEEEEEEec--CCCcEEEEEEeeccccccCccHHHHHHHH---HHHHccCcchhhhhhhccCCCceE-----------
Confidence 35999999862 1221222222 11334455666666655 788889999999998866555554
Q ss_pred ccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcc
Q 001548 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1056)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~ 379 (1056)
+.-++.-.+|...|+.....+...+++.|+.|++.||+|||++.|+||||||.|+||+++|.+||+|||+++.+
T Consensus 78 ------lVfEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f 151 (318)
T KOG0659|consen 78 ------LVFEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFF 151 (318)
T ss_pred ------EEEEeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhcc
Confidence 33355567999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred cccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcc
Q 001548 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1056)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~ 459 (1056)
+.+
T Consensus 152 ~~p----------------------------------------------------------------------------- 154 (318)
T KOG0659|consen 152 GSP----------------------------------------------------------------------------- 154 (318)
T ss_pred CCC-----------------------------------------------------------------------------
Confidence 621
Q ss_pred cccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccC-CCCCccchhHHHHHHHHHHhCC---CCcHHHH
Q 001548 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERAL 535 (1056)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~ 535 (1056)
....+..+-|.||+|||.+.| ..|+..+||||.||++.||+-+ |+++.+.
T Consensus 155 --------------------------~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDi 208 (318)
T KOG0659|consen 155 --------------------------NRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDI 208 (318)
T ss_pred --------------------------CcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchH
Confidence 111224588999999999999 5599999999999999999964 7777776
Q ss_pred HHHHHhhccC------CC---------------C-----CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001548 536 AAAMSDLRDR------IL---------------P-----PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1056)
Q Consensus 536 ~~~~~~~~~~------~l---------------p-----~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~ 589 (1056)
.+.-.+++.- .+ | ..|...+....+|+.+||..||.+|+|+.|+|+|+||...+
T Consensus 209 dQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P 288 (318)
T KOG0659|consen 209 DQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLP 288 (318)
T ss_pred HHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCC
Confidence 6665554421 11 1 12456677789999999999999999999999999999877
Q ss_pred hhchhhhh
Q 001548 590 EVCAEELL 597 (1056)
Q Consensus 590 ~~~~~~~~ 597 (1056)
.+......
T Consensus 289 ~pt~~~~l 296 (318)
T KOG0659|consen 289 LPTPPSKL 296 (318)
T ss_pred CCCChhhC
Confidence 66654433
No 15
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-34 Score=300.41 Aligned_cols=242 Identities=17% Similarity=0.128 Sum_probs=182.4
Q ss_pred CchhHHHhhhcc--ccceeeeCCCC-CccccccccccccccccccCCchhH---HHHhhhhhhccCCCCCCCcccceeee
Q 001548 210 GFSEFFVKTTLK--GKGIVCRGPPL-NAFKERRGMIDTKAFVTTTMPSDAA---LKAAGAMMVASNASPKPVGVGTAVVS 283 (1056)
Q Consensus 210 ~~~~~~~k~~~~--g~Gvv~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (1056)
..+.|.|.+..+ .+|.|||...- ++..+....++- ..+|+. .-++...+++.++|||||....-
T Consensus 17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f-------~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~--- 86 (375)
T KOG0591|consen 17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQF-------GMMDAKARQDCVKEISLLKQLNHPNIVQYYAH--- 86 (375)
T ss_pred cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcch-------hhccHHHHHHHHHHHHHHHhcCCchHHHHHHH---
Confidence 345677766554 56999998741 222221222221 222222 24455678999999999964331
Q ss_pred cCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHH---HhcCCCCCHHHHHHHHHHHHHHHHHhhh--cC--cccccCC
Q 001548 284 NGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWL---NARGHKGKRIECLYIFRQIVALVDYHHT--QG--VTFLDLK 356 (1056)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l---~~~~~~~~~~~~~~i~~QIl~gL~ylHs--~g--IvHrDLK 356 (1056)
..+ ..+.+ -++.||+|++|+|...| ++.++.+++..++.+|.|++.||..||+ .. |+|||||
T Consensus 87 --~f~--~~~ev-------lnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIK 155 (375)
T KOG0591|consen 87 --SFI--EDNEV-------LNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIK 155 (375)
T ss_pred --hhh--ccchh-------hHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCc
Confidence 000 01111 24589999999999988 4566778888999999999999999999 45 9999999
Q ss_pred CCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCC
Q 001548 357 PSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGN 436 (1056)
Q Consensus 357 P~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 436 (1056)
|.||+|+.+|.||+.||||++.+....
T Consensus 156 PaNIFl~~~gvvKLGDfGL~r~l~s~~----------------------------------------------------- 182 (375)
T KOG0591|consen 156 PANIFLTANGVVKLGDFGLGRFLSSKT----------------------------------------------------- 182 (375)
T ss_pred chheEEcCCCceeeccchhHhHhcchh-----------------------------------------------------
Confidence 999999999999999999999876210
Q ss_pred cccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhH
Q 001548 437 KIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIY 516 (1056)
Q Consensus 437 ~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIw 516 (1056)
+...+.+|||+||+||.+.+.+|+++||||
T Consensus 183 --------------------------------------------------tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiW 212 (375)
T KOG0591|consen 183 --------------------------------------------------TFAHSLVGTPYYMSPERIHESGYNFKSDIW 212 (375)
T ss_pred --------------------------------------------------HHHHhhcCCCcccCHHHHhcCCCCcchhHH
Confidence 111278999999999999999999999999
Q ss_pred HHHHHHHHHhC---CCCcHHHHHHHHHhhccCCCCCCC-CCCChhHHHHHHhccccCCCCCCCH
Q 001548 517 SLGVLFFELFG---RFDSERALAAAMSDLRDRILPPSF-LSENPKEAGFCLWQLHPEPLSRPTT 576 (1056)
Q Consensus 517 SLGvlL~eLlt---~f~~~~~~~~~~~~~~~~~lp~~~-~~~~~~~~~li~~lL~~dP~~Rpt~ 576 (1056)
||||++|||.. ||.++ +....-..+..+.+||.+ .-.+.++..+|..|+..||..||+.
T Consensus 213 slGCllyEMcaL~~PF~g~-n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 213 SLGCLLYEMCALQSPFYGD-NLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred HHHHHHHHHHhcCCCcccc-cHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCc
Confidence 99999999974 68887 566666667777777666 4567788899999999999999997
No 16
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.8e-35 Score=324.27 Aligned_cols=250 Identities=20% Similarity=0.201 Sum_probs=191.9
Q ss_pred hhhccccceeeeCCCCCcccccccccccccccc-------ccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCC
Q 001548 217 KTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVT-------TTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1056)
Q Consensus 217 k~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1056)
|-..+=+|-|||+... .....+|.++ +.++.-++|+++ +++++.||||+.+..++... +
T Consensus 124 kIGeGTyg~VYkAr~~-------~tgkivALKKvr~d~~~~~~~~t~~REI~---ILr~l~HpNIikL~eivt~~---~- 189 (560)
T KOG0600|consen 124 KIGEGTYGQVYKARDL-------ETGKIVALKKVRFDNEKEGFPITAIREIK---ILRRLDHPNIIKLEEIVTSK---L- 189 (560)
T ss_pred HhcCcchhheeEeeec-------ccCcEEEEEEeecccCCCcchHHHHHHHH---HHHhcCCCcccceeeEEEec---C-
Confidence 3344456899999973 2222222222 445555555555 89999999999998887754 1
Q ss_pred CcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEE
Q 001548 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1056)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vk 369 (1056)
...++ +..+|..-||..++...+-.+++.++++||+||+.||+|||++||+|||||.+||||+.+|.+|
T Consensus 190 --~~siY---------lVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LK 258 (560)
T KOG0600|consen 190 --SGSIY---------LVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLK 258 (560)
T ss_pred --CceEE---------EEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEE
Confidence 01121 3335666799999999888999999999999999999999999999999999999999999999
Q ss_pred EeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCccccccccccccc
Q 001548 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1056)
Q Consensus 370 l~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~ 449 (1056)
|+|||||+.....
T Consensus 259 iaDFGLAr~y~~~------------------------------------------------------------------- 271 (560)
T KOG0600|consen 259 IADFGLARFYTPS------------------------------------------------------------------- 271 (560)
T ss_pred eccccceeeccCC-------------------------------------------------------------------
Confidence 9999999876511
Q ss_pred CCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccC-CCCCccchhHHHHHHHHHHhCC
Q 001548 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR 528 (1056)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~t~~sDIwSLGvlL~eLlt~ 528 (1056)
....+|..+-|.||+|||+|.| ..|++++|+||+||||.||+.+
T Consensus 272 -----------------------------------~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~g 316 (560)
T KOG0600|consen 272 -----------------------------------GSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLG 316 (560)
T ss_pred -----------------------------------CCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcC
Confidence 1122668899999999999999 5599999999999999999986
Q ss_pred ---CCcHHHHHHHHHhhcc--C---------CCC----------------CCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001548 529 ---FDSERALAAAMSDLRD--R---------ILP----------------PSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1056)
Q Consensus 529 ---f~~~~~~~~~~~~~~~--~---------~lp----------------~~~~~~~~~~~~li~~lL~~dP~~Rpt~~e 578 (1056)
|.+..+..++..+.+- . .+| ..+...++...+|+..||..||.+|.||.+
T Consensus 317 kPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~ 396 (560)
T KOG0600|consen 317 KPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASS 396 (560)
T ss_pred CCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHH
Confidence 7777776666554432 1 111 113345667789999999999999999999
Q ss_pred Hhhhhhhhhhhhhch
Q 001548 579 ILQSEVTNEFQEVCA 593 (1056)
Q Consensus 579 il~~~~~~~~~~~~~ 593 (1056)
+|+|+||...+.+..
T Consensus 397 aL~seyF~t~p~~~~ 411 (560)
T KOG0600|consen 397 ALQSEYFTTEPLPCD 411 (560)
T ss_pred HhcCcccccCCCCCC
Confidence 999999966555444
No 17
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.3e-35 Score=332.09 Aligned_cols=258 Identities=17% Similarity=0.130 Sum_probs=187.1
Q ss_pred eeecccCCchhHHHhhhcc--ccceeeeCCC-CCccccccccccccccccccCCchhHH-H-HhhhhhhccCCCCCCCcc
Q 001548 203 TKMLSKSGFSEFFVKTTLK--GKGIVCRGPP-LNAFKERRGMIDTKAFVTTTMPSDAAL-K-AAGAMMVASNASPKPVGV 277 (1056)
Q Consensus 203 ~~~~~~~~~~~~~~k~~~~--g~Gvv~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~ 277 (1056)
..|.+... --|.+.+.|+ |+..+|++.. ..+--+....+.. ..+.....+ | ...+.+.++++|||||.+
T Consensus 10 ~~i~D~~~-~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk-----~~l~k~~~reKv~~EIeIHr~L~HpnIV~f 83 (592)
T KOG0575|consen 10 EVIEDPRS-KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPK-----KLLKKPKQREKVLNEIEIHRSLKHPNIVQF 83 (592)
T ss_pred CeeecCCc-ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeeh-----HHhcCcchHHHHHHHHHHHHhcCCCcEEee
Confidence 34444433 3355455444 7778999886 2121111111111 111111111 1 122668899999999986
Q ss_pred cceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCC
Q 001548 278 GTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKP 357 (1056)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP 357 (1056)
..-.....+.. .+.|.|..++|.++++. .+.+++.+++.|++||+.||.|||+++|||||||.
T Consensus 84 ~~~FEDs~nVY----------------ivLELC~~~sL~el~Kr-rk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKL 146 (592)
T KOG0575|consen 84 YHFFEDSNNVY----------------IVLELCHRGSLMELLKR-RKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKL 146 (592)
T ss_pred eeEeecCCceE----------------EEEEecCCccHHHHHHh-cCCCCcHHHHHHHHHHHHHHHHHHhcCceecccch
Confidence 65544322222 38899999999999984 45677889999999999999999999999999999
Q ss_pred CCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCc
Q 001548 358 SSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNK 437 (1056)
Q Consensus 358 ~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~ 437 (1056)
.||+|+.+.+|||+|||||..+..++
T Consensus 147 GNlfL~~~~~VKIgDFGLAt~le~~~------------------------------------------------------ 172 (592)
T KOG0575|consen 147 GNLFLNENMNVKIGDFGLATQLEYDG------------------------------------------------------ 172 (592)
T ss_pred hheeecCcCcEEecccceeeeecCcc------------------------------------------------------
Confidence 99999999999999999998765210
Q ss_pred ccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHH
Q 001548 438 IETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYS 517 (1056)
Q Consensus 438 ~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwS 517 (1056)
|+ -.+.||||.|.|||++....+++.+||||
T Consensus 173 ----------------------Er---------------------------k~TlCGTPNYIAPEVl~k~gHsfEvDiWS 203 (592)
T KOG0575|consen 173 ----------------------ER---------------------------KKTLCGTPNYIAPEVLNKSGHSFEVDIWS 203 (592)
T ss_pred ----------------------cc---------------------------cceecCCCcccChhHhccCCCCCchhhhh
Confidence 11 12789999999999999999999999999
Q ss_pred HHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001548 518 LGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1056)
Q Consensus 518 LGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~ 588 (1056)
+||+||.||.| |........+..+......-|. ..+++.++||.+||.+||.+|||+.+||.|+||...
T Consensus 204 lGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~--~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g 275 (592)
T KOG0575|consen 204 LGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPS--HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSG 275 (592)
T ss_pred hhhHHHhhhhCCCCcccchHHHHHHHHHhcCccccc--ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCC
Confidence 99999999986 4444333444333333333333 558999999999999999999999999999999543
No 18
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=312.91 Aligned_cols=255 Identities=18% Similarity=0.177 Sum_probs=188.9
Q ss_pred ccceeeeCCCCCcccccccccccccccc--ccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCccc
Q 001548 222 GKGIVCRGPPLNAFKERRGMIDTKAFVT--TTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1056)
Q Consensus 222 g~Gvv~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1056)
-.|+||+.... . .++..+.++.. =.-..++.|-....++++..+|+||+.+.+....... .+...++
T Consensus 34 AyGvVcsA~~~----~-t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~---~~f~DvY--- 102 (359)
T KOG0660|consen 34 AYGVVCSAKDK----R-TGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSR---DKFNDVY--- 102 (359)
T ss_pred ceeeEEEEEEc----C-CCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccc---cccceeE---
Confidence 45999997652 1 11111222222 1244566666777789999999999988777543111 1122222
Q ss_pred ccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcc
Q 001548 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1056)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~ 379 (1056)
.++++ .+.+|...|+... .+++..+..+++|||.||.|+|+.||+||||||+|+|++.+..+||+|||+||..
T Consensus 103 -----iV~el-MetDL~~iik~~~-~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~ 175 (359)
T KOG0660|consen 103 -----LVFEL-METDLHQIIKSQQ-DLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYL 175 (359)
T ss_pred -----EehhH-HhhHHHHHHHcCc-cccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeec
Confidence 23444 4889999998764 3677799999999999999999999999999999999999999999999999886
Q ss_pred cccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcc
Q 001548 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1056)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~ 459 (1056)
...
T Consensus 176 ~~~----------------------------------------------------------------------------- 178 (359)
T KOG0660|consen 176 DKF----------------------------------------------------------------------------- 178 (359)
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 510
Q ss_pred cccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccC-CCCCccchhHHHHHHHHHHhCC---CCcHHHH
Q 001548 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERAL 535 (1056)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~ 535 (1056)
.....+|..+.|.||+|||++.. ..|+.++||||+||||.|||++ |++.+..
T Consensus 179 ------------------------~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v 234 (359)
T KOG0660|consen 179 ------------------------FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYV 234 (359)
T ss_pred ------------------------CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchH
Confidence 01123568999999999999876 6799999999999999999986 7776444
Q ss_pred HHHHHhhcc------------------------C-----CCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhh
Q 001548 536 AAAMSDLRD------------------------R-----ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (1056)
Q Consensus 536 ~~~~~~~~~------------------------~-----~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~ 586 (1056)
.+....+.. + .+...|+..+|...+|+.+||..||.+|+|++|+|+|||+.
T Consensus 235 ~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~ 314 (359)
T KOG0660|consen 235 HQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLA 314 (359)
T ss_pred HHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhh
Confidence 433222111 0 11123678899999999999999999999999999999999
Q ss_pred hhhhhchhh
Q 001548 587 EFQEVCAEE 595 (1056)
Q Consensus 587 ~~~~~~~~~ 595 (1056)
...++..+.
T Consensus 315 ~~hdp~dEP 323 (359)
T KOG0660|consen 315 PYHDPEDEP 323 (359)
T ss_pred hhcCCccCC
Confidence 988877633
No 19
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-34 Score=320.06 Aligned_cols=228 Identities=17% Similarity=0.132 Sum_probs=185.6
Q ss_pred cccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccc
Q 001548 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1056)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1056)
+..|.||+|++ +++..++++|++--..| ++.++.++||||+.++.+ ++.-|++|
T Consensus 135 GaQGAVF~Grl-------~netVAVKKV~elkETd-------IKHLRkLkH~NII~FkGV-----------CtqsPcyC- 188 (904)
T KOG4721|consen 135 GAQGAVFLGRL-------HNETVAVKKVRELKETD-------IKHLRKLKHPNIITFKGV-----------CTQSPCYC- 188 (904)
T ss_pred Ccccceeeeec-------cCceehhHHHhhhhhhh-------HHHHHhccCcceeeEeee-----------ecCCceeE-
Confidence 45699999998 66667778888555555 899999999999998887 56778888
Q ss_pred cCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhccc
Q 001548 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1056)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~ 380 (1056)
++||||.-|-|.+.|+..+ .+.......+.++|+.|+.|||.+.|||||||.-||||+.+..|||+|||.++...
T Consensus 189 ----IiMEfCa~GqL~~VLka~~-~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~ 263 (904)
T KOG4721|consen 189 ----IIMEFCAQGQLYEVLKAGR-PITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELS 263 (904)
T ss_pred ----EeeeccccccHHHHHhccC-ccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhh
Confidence 7999999999999998765 45555888999999999999999999999999999999999999999999988765
Q ss_pred ccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCccc
Q 001548 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1056)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~ 460 (1056)
+-
T Consensus 264 ~~------------------------------------------------------------------------------ 265 (904)
T KOG4721|consen 264 DK------------------------------------------------------------------------------ 265 (904)
T ss_pred hh------------------------------------------------------------------------------
Confidence 20
Q ss_pred ccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHH
Q 001548 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAA 537 (1056)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~ 537 (1056)
-....++||..|||||+|...+++.|+|||||||+||||||+ |..-+....
T Consensus 266 --------------------------STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI 319 (904)
T KOG4721|consen 266 --------------------------STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI 319 (904)
T ss_pred --------------------------hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee
Confidence 001267899999999999999999999999999999999997 322221111
Q ss_pred HHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhh
Q 001548 538 AMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSE 583 (1056)
Q Consensus 538 ~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~ 583 (1056)
.+..-......|....++..++-|++.||.-.|..||++++||.|.
T Consensus 320 IwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 320 IWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL 365 (904)
T ss_pred EEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence 1111112222344556677788999999999999999999999996
No 20
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-34 Score=329.15 Aligned_cols=255 Identities=21% Similarity=0.244 Sum_probs=186.2
Q ss_pred CchhHHHhhhcc--ccceeeeCCCC-CccccccccccccccccccC-CchhHHHHhhhhhhccCC-CCCCCcccceeeec
Q 001548 210 GFSEFFVKTTLK--GKGIVCRGPPL-NAFKERRGMIDTKAFVTTTM-PSDAALKAAGAMMVASNA-SPKPVGVGTAVVSN 284 (1056)
Q Consensus 210 ~~~~~~~k~~~~--g~Gvv~~g~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 284 (1056)
....|.++++++ .+|.|+.+... .+..+.-. +-.+.++.... ..+...+ .....++... ||||+.+.......
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiK-ii~~~~~~~~~~~~~~~i~-rEi~~~~~~~~HpnI~~l~ev~~t~ 92 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIK-IIDRKKVSSKSQKLDELIK-REISILRRLRSHPNIIRLLEVFATP 92 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEE-EechhcccccccccchhhH-HHHHHHHHhccCCCEeEEEEEEecC
Confidence 344677888887 57999999652 11222111 11111111111 1221222 2346788888 99999877774432
Q ss_pred CCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEcc
Q 001548 285 GSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ 364 (1056)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~ 364 (1056)
.-.. .+||||.||+|.++|...++ +.+.+++.+|+||+.||+|||++||+||||||+|||++.
T Consensus 93 ~~~~----------------ivmEy~~gGdL~~~i~~~g~-l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~ 155 (370)
T KOG0583|consen 93 TKIY----------------IVMEYCSGGDLFDYIVNKGR-LKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDG 155 (370)
T ss_pred CeEE----------------EEEEecCCccHHHHHHHcCC-CChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecC
Confidence 2211 39999999999999988554 555799999999999999999999999999999999999
Q ss_pred C-CcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCccccccc
Q 001548 365 S-NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANE 443 (1056)
Q Consensus 365 ~-~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (1056)
+ +.+||+|||++.....
T Consensus 156 ~~~~~Kl~DFG~s~~~~~-------------------------------------------------------------- 173 (370)
T KOG0583|consen 156 NEGNLKLSDFGLSAISPG-------------------------------------------------------------- 173 (370)
T ss_pred CCCCEEEeccccccccCC--------------------------------------------------------------
Confidence 9 9999999999876520
Q ss_pred ccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCC-C-CccchhHHHHHH
Q 001548 444 SDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV-C-TTSSNIYSLGVL 521 (1056)
Q Consensus 444 ~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~-~-t~~sDIwSLGvl 521 (1056)
....+.+.+||+.|+|||++.+.. | +.++||||+||+
T Consensus 174 -----------------------------------------~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GVi 212 (370)
T KOG0583|consen 174 -----------------------------------------EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVI 212 (370)
T ss_pred -----------------------------------------CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHH
Confidence 001223789999999999999977 8 589999999999
Q ss_pred HHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhh
Q 001548 522 FFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1056)
Q Consensus 522 L~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~ 587 (1056)
||.|++| |...........+.+....-|.+.. +++++.|+.+||.+||.+|+|+.+|+.||||..
T Consensus 213 Ly~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~-S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 213 LYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLL-SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred HHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcC-CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 9999997 5443333333333333332333333 999999999999999999999999999999997
No 21
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-34 Score=315.38 Aligned_cols=255 Identities=12% Similarity=0.155 Sum_probs=187.9
Q ss_pred chhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCC
Q 001548 211 FSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLD 288 (1056)
Q Consensus 211 ~~~~~~k~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1056)
+..|.+.+.++ .+||||||...+.- ...++...++++- .+--+..-.+..++++..+|||||.+++....+...
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~--~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i- 84 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSG--TEVAIKCIAKKKL-NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFI- 84 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCC--ceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeE-
Confidence 34455555544 67999999873222 1233333222221 111112223446789999999999988875533322
Q ss_pred CCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccC---
Q 001548 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS--- 365 (1056)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~--- 365 (1056)
..+||||.||||.+||..++ .+++..+++++.||+.||++||+++||||||||+||||+..
T Consensus 85 ---------------~lVMEyC~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~ 148 (429)
T KOG0595|consen 85 ---------------YLVMEYCNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARN 148 (429)
T ss_pred ---------------EEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCC
Confidence 24999999999999998887 47777999999999999999999999999999999999875
Q ss_pred ---CcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccc
Q 001548 366 ---NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETAN 442 (1056)
Q Consensus 366 ---~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (1056)
-.+||+|||+||.+...
T Consensus 149 ~~~~~LKIADFGfAR~L~~~------------------------------------------------------------ 168 (429)
T KOG0595|consen 149 DTSPVLKIADFGFARFLQPG------------------------------------------------------------ 168 (429)
T ss_pred CCCceEEecccchhhhCCch------------------------------------------------------------
Confidence 34899999999886510
Q ss_pred cccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHH
Q 001548 443 ESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLF 522 (1056)
Q Consensus 443 ~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL 522 (1056)
....+.+|++.|||||++....|+.|+|+||+|++|
T Consensus 169 --------------------------------------------~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Il 204 (429)
T KOG0595|consen 169 --------------------------------------------SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTIL 204 (429)
T ss_pred --------------------------------------------hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHH
Confidence 011268999999999999999999999999999999
Q ss_pred HHHhCC---CCcHHHHHHHHHhhccCCCCCC-CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001548 523 FELFGR---FDSERALAAAMSDLRDRILPPS-FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1056)
Q Consensus 523 ~eLlt~---f~~~~~~~~~~~~~~~~~lp~~-~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~ 589 (1056)
|+|++| |............-......+. ....++...+|+..+|+.+|.+|.+..+-+.|+++...+
T Consensus 205 yq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 205 YQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP 275 (429)
T ss_pred HHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence 999987 4444333333333333333333 334566677999999999999999999999999988764
No 22
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.4e-32 Score=292.23 Aligned_cols=289 Identities=21% Similarity=0.310 Sum_probs=256.3
Q ss_pred ccccccccccccceeeecccccCCCCcE--EEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEe
Q 001548 721 ADNDLLRDRENLFLAQQDQEIQNPTDRL--GAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAG 798 (1056)
Q Consensus 721 ~~~~~l~gh~~~v~~~~~~~~~~~~~~l--s~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~ 798 (1056)
+..+.+.||...|..+.+ .|...+ +++.|.++++||+.++++...+ .+|++.|..++|+..|+++|+++
T Consensus 99 ~l~~~l~g~r~~vt~v~~----hp~~~~v~~as~d~tikv~D~~tg~~e~~L-----rGHt~sv~di~~~a~Gk~l~tcS 169 (406)
T KOG0295|consen 99 NLVQKLAGHRSSVTRVIF----HPSEALVVSASEDATIKVFDTETGELERSL-----RGHTDSVFDISFDASGKYLATCS 169 (406)
T ss_pred Cchhhhhccccceeeeee----ccCceEEEEecCCceEEEEEccchhhhhhh-----hccccceeEEEEecCccEEEecC
Confidence 456778889988888776 455555 4456999999999988875554 49999999999999999999999
Q ss_pred CCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEE
Q 001548 799 VSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVD 878 (1056)
Q Consensus 799 ~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~ 878 (1056)
.|-.+++||+.+ ...+.....+|.-.|.+++|-|. +.+++|+++|.+|+.|++.+|-++.+|.+|...|..++
T Consensus 170 sDl~~~LWd~~~------~~~c~ks~~gh~h~vS~V~f~P~-gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~ 242 (406)
T KOG0295|consen 170 SDLSAKLWDFDT------FFRCIKSLIGHEHGVSSVFFLPL-GDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVR 242 (406)
T ss_pred CccchhheeHHH------HHHHHHHhcCcccceeeEEEEec-CCeeeecccccceeEEecccceeEEeccCchHhEEEEE
Confidence 999999999975 23445566789999999999998 89999999999999999999999999999999999999
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCC--------------CcEEEEEeCCCeEEEEEc
Q 001548 879 FSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHS--------------SHLLAFGSADYRTYCYDL 943 (1056)
Q Consensus 879 fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~--------------~~~lasGs~Dg~V~lwDl 943 (1056)
.+. ||.++|+||.|.+|++|-+.+++|...+. |..+|.|++|.|.. ..++++|+.|++|++||+
T Consensus 243 v~~-DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv 321 (406)
T KOG0295|consen 243 VNQ-DGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDV 321 (406)
T ss_pred ecC-CeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEec
Confidence 998 99999999999999999999998887775 77889999998753 248999999999999999
Q ss_pred CCCCcceEEecCCCCCeEEEEEcC-CCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceee
Q 001548 944 RNARAPWCVLAGHEKAVSYVKFLD-SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPF 1022 (1056)
Q Consensus 944 r~~~~~~~~l~gH~~~V~~l~fs~-~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~ 1022 (1056)
.++.. +.++.||.++|..++|+| |.+|+|+..|++|++||++ ...|..++..|...|+++.
T Consensus 322 ~tg~c-L~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~--------~~~cmk~~~ah~hfvt~lD--------- 383 (406)
T KOG0295|consen 322 STGMC-LFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLK--------NLQCMKTLEAHEHFVTSLD--------- 383 (406)
T ss_pred cCCeE-EEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEec--------cceeeeccCCCcceeEEEe---------
Confidence 99876 789999999999999994 6679999999999999999 6789999999999999998
Q ss_pred EEeeCCCCEEEEEEcCCcEEEEeC
Q 001548 1023 TIFNLSDCWLLLVCFDFTTLSFRT 1046 (1056)
Q Consensus 1023 ~~~s~~g~~l~s~s~D~~v~iW~v 1046 (1056)
++.+..+++||+-|.++++|..
T Consensus 384 --fh~~~p~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 384 --FHKTAPYVVTGSVDQTVKVWEC 405 (406)
T ss_pred --cCCCCceEEeccccceeeeeec
Confidence 6667779999999999999964
No 23
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.6e-34 Score=326.45 Aligned_cols=263 Identities=21% Similarity=0.248 Sum_probs=196.8
Q ss_pred eeecccCCchhHHHhhhcc--ccceeeeCCCCCccccccccccccccc---cccCCchhHHHHhhhhhhccCCCCCCCcc
Q 001548 203 TKMLSKSGFSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFV---TTTMPSDAALKAAGAMMVASNASPKPVGV 277 (1056)
Q Consensus 203 ~~~~~~~~~~~~~~k~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (1056)
.+|.+....+-|.+-+||+ +.|.|..++. +.....-++...-+. ....+..-.++ ..+|+-..|||+..+
T Consensus 3 ~~~~~~~tiGpwkLgkTLG~Gstg~vrlakh--~~TGqlaaiKii~k~~~~s~s~~~~IerE---IviMkLi~HpnVl~L 77 (786)
T KOG0588|consen 3 KRMSHKNTIGPWKLGKTLGKGSTGCVRLAKH--AETGQLAAIKIIPKRSELSSSQPAGIERE---IVIMKLIEHPNVLRL 77 (786)
T ss_pred ccccccccccceeccccccCCCCceehhhhc--ccccceeEEEeeccccccccccccchhhh---hHHHHHhcCCCeeee
Confidence 3466777777788888886 5588888776 222211122221111 11122222222 346777789999987
Q ss_pred cceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCC
Q 001548 278 GTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKP 357 (1056)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP 357 (1056)
.++..-+.-+. .+.||++||.|+++|-.+|+.++. ++.++|+||+.||.|||..+|+||||||
T Consensus 78 ydVwe~~~~ly----------------lvlEyv~gGELFdylv~kG~l~e~-eaa~ff~QIi~gv~yCH~~~icHRDLKp 140 (786)
T KOG0588|consen 78 YDVWENKQHLY----------------LVLEYVPGGELFDYLVRKGPLPER-EAAHFFRQILDGVSYCHAFNICHRDLKP 140 (786)
T ss_pred eeeeccCceEE----------------EEEEecCCchhHHHHHhhCCCCCH-HHHHHHHHHHHHHHHHhhhcceeccCCc
Confidence 77744332222 388999999999999888876666 8999999999999999999999999999
Q ss_pred CCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCc
Q 001548 358 SSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNK 437 (1056)
Q Consensus 358 ~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~ 437 (1056)
+|+||+..++|||+|||+|..-.
T Consensus 141 ENlLLd~~~nIKIADFGMAsLe~--------------------------------------------------------- 163 (786)
T KOG0588|consen 141 ENLLLDVKNNIKIADFGMASLEV--------------------------------------------------------- 163 (786)
T ss_pred hhhhhhcccCEeeeccceeeccc---------------------------------------------------------
Confidence 99999999999999999985422
Q ss_pred ccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCC-CccchhH
Q 001548 438 IETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVC-TTSSNIY 516 (1056)
Q Consensus 438 ~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~-t~~sDIw 516 (1056)
+...+.+.||+|.|+|||++.|.+| +.++|||
T Consensus 164 -----------------------------------------------~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVW 196 (786)
T KOG0588|consen 164 -----------------------------------------------PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVW 196 (786)
T ss_pred -----------------------------------------------CCccccccCCCcccCCchhhcCCCCCCCccccc
Confidence 1122337799999999999999998 7999999
Q ss_pred HHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhhhch
Q 001548 517 SLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCA 593 (1056)
Q Consensus 517 SLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~~~~ 593 (1056)
|.|||||.||+| |++++-...+.+..++..--| -..++++.+||.+||..||++|+|++||+.|||+........
T Consensus 197 SCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MP--s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~~~ 274 (786)
T KOG0588|consen 197 SCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMP--SNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSLPS 274 (786)
T ss_pred hhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCC--CcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCCCh
Confidence 999999999986 776544444444444433334 456899999999999999999999999999999987655443
No 24
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.1e-34 Score=309.32 Aligned_cols=247 Identities=19% Similarity=0.245 Sum_probs=185.3
Q ss_pred ccceeeeCCCCCcccccccccccccccc-------ccCCchhHHHHhhhhhhccCCCCC-CCcccceeeecCCCCCCcCC
Q 001548 222 GKGIVCRGPPLNAFKERRGMIDTKAFVT-------TTMPSDAALKAAGAMMVASNASPK-PVGVGTAVVSNGSLDLGART 293 (1056)
Q Consensus 222 g~Gvv~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 293 (1056)
-.|+||||..- ...+.+|.+. ++.|....|++. ++...+|+| |+.+.+....+.... ..
T Consensus 23 tyg~Vykar~~-------~~g~~VALKkirl~~~~EG~P~taiREis---llk~L~~~~~iv~L~dv~~~~~~~~---~~ 89 (323)
T KOG0594|consen 23 TYGVVYKARSK-------RTGKFVALKKIRLEFEEEGVPSTAIREIS---LLKRLSHANHIVRLHDVIHTSNNHR---GI 89 (323)
T ss_pred CceEEEEEEEe-------cCCCEEEEEEEeccccccCCCchhhHHHH---HHHHhCCCcceEEEEeeeeeccccc---cc
Confidence 34999999762 1112222211 346666666666 888889999 888877766555411 01
Q ss_pred CCCcccccCCCcccccCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEE
Q 001548 294 GVPASCWIGGLRQGSSDHGVNLREWLNARG---HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1056)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~---~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl 370 (1056)
+. ..+..++..-+|..+++... ...+...++.+++||+.||+|||++||+||||||+||||+++|.+||
T Consensus 90 ~~--------l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKl 161 (323)
T KOG0594|consen 90 GK--------LYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKL 161 (323)
T ss_pred ce--------EEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEee
Confidence 11 11223456679999998766 34666789999999999999999999999999999999999999999
Q ss_pred eCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccC
Q 001548 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1056)
Q Consensus 371 ~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g 450 (1056)
+|||+|+...
T Consensus 162 aDFGlAra~~---------------------------------------------------------------------- 171 (323)
T KOG0594|consen 162 ADFGLARAFS---------------------------------------------------------------------- 171 (323)
T ss_pred eccchHHHhc----------------------------------------------------------------------
Confidence 9999998644
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCC-CCCccchhHHHHHHHHHHhCC-
Q 001548 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELFGR- 528 (1056)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~~t~~sDIwSLGvlL~eLlt~- 528 (1056)
.|...++..++|.||+|||++.|. .|++.+||||+|||++||+++
T Consensus 172 ---------------------------------ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~ 218 (323)
T KOG0594|consen 172 ---------------------------------IPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRR 218 (323)
T ss_pred ---------------------------------CCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCC
Confidence 122335578999999999999996 699999999999999999985
Q ss_pred --CCcHHHHHHHHHhhccCCCC----------------------------CCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001548 529 --FDSERALAAAMSDLRDRILP----------------------------PSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1056)
Q Consensus 529 --f~~~~~~~~~~~~~~~~~lp----------------------------~~~~~~~~~~~~li~~lL~~dP~~Rpt~~e 578 (1056)
|++..+..+...+.+-...| ...+...+...+++.+||+.+|.+|.|+..
T Consensus 219 ~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~ 298 (323)
T KOG0594|consen 219 PLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKG 298 (323)
T ss_pred CCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHH
Confidence 88887777766655432111 001223357789999999999999999999
Q ss_pred Hhhhhhhhhhhhhc
Q 001548 579 ILQSEVTNEFQEVC 592 (1056)
Q Consensus 579 il~~~~~~~~~~~~ 592 (1056)
+|.||||.......
T Consensus 299 al~h~yf~~~~~~~ 312 (323)
T KOG0594|consen 299 ALTHPYFSELPEKS 312 (323)
T ss_pred HhcChhhcccccch
Confidence 99999999875443
No 25
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=1.4e-31 Score=271.72 Aligned_cols=271 Identities=18% Similarity=0.301 Sum_probs=236.1
Q ss_pred EEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecC
Q 001548 748 LGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSN 827 (1056)
Q Consensus 748 ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h 827 (1056)
.++++|.+|+||...++.+..+++ +..+.|+.+.+.|++..||+|+ ..+|++||+++. .......+-+|
T Consensus 14 vsA~YDhTIRfWqa~tG~C~rTiq-----h~dsqVNrLeiTpdk~~LAaa~-~qhvRlyD~~S~-----np~Pv~t~e~h 82 (311)
T KOG0315|consen 14 VSAGYDHTIRFWQALTGICSRTIQ-----HPDSQVNRLEITPDKKDLAAAG-NQHVRLYDLNSN-----NPNPVATFEGH 82 (311)
T ss_pred EeccCcceeeeeehhcCeEEEEEe-----cCccceeeEEEcCCcchhhhcc-CCeeEEEEccCC-----CCCceeEEecc
Confidence 488999999999999999988887 5678899999999999999988 558999999862 22234456689
Q ss_pred CCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcee
Q 001548 828 RSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSL 907 (1056)
Q Consensus 828 ~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~ 907 (1056)
+..|+.+.|.-+ +..++|||.||++||||++...+-+.|. |..+|++|..+| +..-|++|..+|.|++||+++..+.
T Consensus 83 ~kNVtaVgF~~d-grWMyTgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhp-nQteLis~dqsg~irvWDl~~~~c~ 159 (311)
T KOG0315|consen 83 TKNVTAVGFQCD-GRWMYTGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHP-NQTELISGDQSGNIRVWDLGENSCT 159 (311)
T ss_pred CCceEEEEEeec-CeEEEecCCCceEEEEeccCcccchhcc-CCCCcceEEecC-CcceEEeecCCCcEEEEEccCCccc
Confidence 999999999998 9999999999999999999988888886 789999999999 8888999999999999999998777
Q ss_pred EEEe--CCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCC-----cceEEecCCCCCeEEEEEc-CCCEEEEEECCCe
Q 001548 908 ATIK--NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNAR-----APWCVLAGHEKAVSYVKFL-DSGTLVTASTDNK 979 (1056)
Q Consensus 908 ~~~~--~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~-----~~~~~l~gH~~~V~~l~fs-~~~~L~SgS~Dg~ 979 (1056)
..+- ....|.++...|+|. +++++...|.+++|++-+.. .|+..+..|..-+....++ +.++|+++|.|.+
T Consensus 160 ~~liPe~~~~i~sl~v~~dgs-ml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdkt 238 (311)
T KOG0315|consen 160 HELIPEDDTSIQSLTVMPDGS-MLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKT 238 (311)
T ss_pred cccCCCCCcceeeEEEcCCCc-EEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCce
Confidence 6664 346799999999997 88889999999999987643 2677789999999999999 6778999999999
Q ss_pred EEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCCeE
Q 001548 980 LKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWGCL 1051 (1056)
Q Consensus 980 IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~~~ 1051 (1056)
++||++... . +.-..++||..++.+.. ||.+|.||+|++.|.++++|+++.+.-
T Consensus 239 v~iwn~~~~-~------kle~~l~gh~rWvWdc~-----------FS~dg~YlvTassd~~~rlW~~~~~k~ 292 (311)
T KOG0315|consen 239 VKIWNTDDF-F------KLELVLTGHQRWVWDCA-----------FSADGEYLVTASSDHTARLWDLSAGKE 292 (311)
T ss_pred EEEEecCCc-e------eeEEEeecCCceEEeee-----------eccCccEEEecCCCCceeecccccCce
Confidence 999999843 1 34567889998888877 899999999999999999999998863
No 26
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-34 Score=307.54 Aligned_cols=256 Identities=19% Similarity=0.202 Sum_probs=185.1
Q ss_pred CCchhHHHhhhcc--ccceeeeCCCCC--ccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeec
Q 001548 209 SGFSEFFVKTTLK--GKGIVCRGPPLN--AFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSN 284 (1056)
Q Consensus 209 ~~~~~~~~k~~~~--g~Gvv~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (1056)
.+...|-+.+..+ ++|.||+-+..| .+++-+. -.+++.-..- +.+--.....++..-+||.||.+.-.-+..
T Consensus 22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKv--l~K~~iv~~~--e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~ 97 (357)
T KOG0598|consen 22 VGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKV--LKKKKIVEKK--EVRHTKAERNILSKIKHPFIVKLIYSFQTE 97 (357)
T ss_pred CChhheeeeeeeeccCCceEEEEEEcccCceeehhh--hhhhHhhhhh--hHHHHHHHHHHHHhCCCCcEeeeEEecccC
Confidence 3455666655554 668888765432 1122000 0111111111 111122223345567999999877765544
Q ss_pred CCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEcc
Q 001548 285 GSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ 364 (1056)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~ 364 (1056)
..+. .+.+|..||.|+-.|.+.++ +++..++.|+..|+.||.|||++|||||||||+||||+.
T Consensus 98 ~kLy----------------lVld~~~GGeLf~hL~~eg~-F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~ 160 (357)
T KOG0598|consen 98 EKLY----------------LVLDYLNGGELFYHLQREGR-FSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDE 160 (357)
T ss_pred CeEE----------------EEEeccCCccHHHHHHhcCC-cchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecC
Confidence 4333 27889999999999988776 555589999999999999999999999999999999999
Q ss_pred CCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccc
Q 001548 365 SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANES 444 (1056)
Q Consensus 365 ~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (1056)
.|+++|+|||||+.....+
T Consensus 161 ~GHi~LtDFgL~k~~~~~~------------------------------------------------------------- 179 (357)
T KOG0598|consen 161 QGHIKLTDFGLCKEDLKDG------------------------------------------------------------- 179 (357)
T ss_pred CCcEEEeccccchhcccCC-------------------------------------------------------------
Confidence 9999999999998644110
Q ss_pred cccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHH
Q 001548 445 DINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFE 524 (1056)
Q Consensus 445 ~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~e 524 (1056)
..-.+.|||+.|||||++.+.+|+.++|+|||||++||
T Consensus 180 ------------------------------------------~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYe 217 (357)
T KOG0598|consen 180 ------------------------------------------DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYE 217 (357)
T ss_pred ------------------------------------------CccccccCCccccChHHHhcCCCCcccchHhHHHHHHH
Confidence 00015799999999999999999999999999999999
Q ss_pred HhCC---CCcHHHHHHHHHhhccC-CCCCCCCCCChhHHHHHHhccccCCCCCC----CHHHHhhhhhhhhhhh
Q 001548 525 LFGR---FDSERALAAAMSDLRDR-ILPPSFLSENPKEAGFCLWQLHPEPLSRP----TTREILQSEVTNEFQE 590 (1056)
Q Consensus 525 Llt~---f~~~~~~~~~~~~~~~~-~lp~~~~~~~~~~~~li~~lL~~dP~~Rp----t~~eil~~~~~~~~~~ 590 (1056)
||+| |...+......++++.+ ..+|. -.+++.++|+.++|..||.+|. .+.+|-.||||.....
T Consensus 218 ML~G~pPF~~~~~~~~~~~I~~~k~~~~p~--~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW 289 (357)
T KOG0598|consen 218 MLTGKPPFYAEDVKKMYDKILKGKLPLPPG--YLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINW 289 (357)
T ss_pred HhhCCCCCcCccHHHHHHHHhcCcCCCCCc--cCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCH
Confidence 9986 55544444444455544 33333 2488899999999999999995 6899999999987643
No 27
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=1.9e-32 Score=316.80 Aligned_cols=249 Identities=20% Similarity=0.338 Sum_probs=224.0
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCC----C--------------------CCCcccccceEeecCCCCeE
Q 001548 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNAL----F--------------------NDSVDVYYPAVEMSNRSKLS 832 (1056)
Q Consensus 777 ~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~----~--------------------~~~~~~~~~~~~~~h~~~V~ 832 (1056)
+....|+|+.|++++.+||.|-.|..|++|.+... . .+...........+|.++|+
T Consensus 376 nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVy 455 (707)
T KOG0263|consen 376 NTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVY 455 (707)
T ss_pred EcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCcee
Confidence 34567899999999999999999999999998720 0 00011122234679999999
Q ss_pred EEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEe-
Q 001548 833 CVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK- 911 (1056)
Q Consensus 833 ~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~- 911 (1056)
++.|+|+ .++|++||.|++||+|.+.+..++-.|++|..+||+|+|+| .|-+|||||.|++.++|......++..+.
T Consensus 456 g~sFsPd-~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P-~GyYFatas~D~tArLWs~d~~~PlRifag 533 (707)
T KOG0263|consen 456 GCSFSPD-RRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAP-RGYYFATASHDQTARLWSTDHNKPLRIFAG 533 (707)
T ss_pred eeeeccc-ccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecC-CceEEEecCCCceeeeeecccCCchhhhcc
Confidence 9999999 99999999999999999999999999999999999999999 99999999999999999999988888886
Q ss_pred CCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEECCCCCC
Q 001548 912 NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSH 990 (1056)
Q Consensus 912 ~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~~ 990 (1056)
|.+.|.|++|+|++. ++|+||.|.+|++||..++.. +..|.||..+|.+|+|+ .+.+|+||+.|+.|+|||+.
T Consensus 534 hlsDV~cv~FHPNs~-Y~aTGSsD~tVRlWDv~~G~~-VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~---- 607 (707)
T KOG0263|consen 534 HLSDVDCVSFHPNSN-YVATGSSDRTVRLWDVSTGNS-VRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLA---- 607 (707)
T ss_pred cccccceEEECCccc-ccccCCCCceEEEEEcCCCcE-EEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcC----
Confidence 779999999999996 999999999999999999887 89999999999999999 67789999999999999998
Q ss_pred CCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCC
Q 001548 991 TGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSW 1048 (1056)
Q Consensus 991 ~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~ 1048 (1056)
.+..+..+.||++.|.+++ ||.+|..|+++|.|.+|++||+..
T Consensus 608 ----~~~~v~~l~~Ht~ti~Sls-----------FS~dg~vLasgg~DnsV~lWD~~~ 650 (707)
T KOG0263|consen 608 ----NGSLVKQLKGHTGTIYSLS-----------FSRDGNVLASGGADNSVRLWDLTK 650 (707)
T ss_pred ----CCcchhhhhcccCceeEEE-----------EecCCCEEEecCCCCeEEEEEchh
Confidence 5688999999999999999 899999999999999999999754
No 28
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-33 Score=311.55 Aligned_cols=214 Identities=21% Similarity=0.179 Sum_probs=168.7
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++...+|||||.....-..... .. .+..|||+.||+|.++++..+..+++..++.+.+||++||
T Consensus 65 i~iL~~l~~p~IV~~~G~~~~~~~-------~~-------~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL 130 (313)
T KOG0198|consen 65 IRILSRLNHPNIVQYYGSSSSREN-------DE-------YNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGL 130 (313)
T ss_pred HHHHHhCCCCCEEeeCCccccccC-------ee-------eEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence 567888889999963221000000 01 2358999999999999988765788889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEcc-CCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQ-SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~-~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
.|||++|||||||||+|||+++ ++.+||+|||+++.......
T Consensus 131 ~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~------------------------------------- 173 (313)
T KOG0198|consen 131 AYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT------------------------------------- 173 (313)
T ss_pred HHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccccc-------------------------------------
Confidence 9999999999999999999999 69999999999877551000
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
.........||+.||||
T Consensus 174 ---------------------------------------------------------------~~~~~~~~~Gtp~~maP 190 (313)
T KOG0198|consen 174 ---------------------------------------------------------------KSDSELSVQGTPNYMAP 190 (313)
T ss_pred ---------------------------------------------------------------cccccccccCCccccCc
Confidence 00001157899999999
Q ss_pred ccccCCC-CCccchhHHHHHHHHHHhCCCCcHHH----HHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCH
Q 001548 502 EELSGGV-CTTSSNIYSLGVLFFELFGRFDSERA----LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT 576 (1056)
Q Consensus 502 E~l~~~~-~t~~sDIwSLGvlL~eLlt~f~~~~~----~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~ 576 (1056)
|++..+. ..+++|||||||++.||+|+-.++.. ........+....|+.....+++..+|+.+||..||.+||||
T Consensus 191 Evi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta 270 (313)
T KOG0198|consen 191 EVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTA 270 (313)
T ss_pred hhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCH
Confidence 9999633 34699999999999999998656544 444555666666676666788999999999999999999999
Q ss_pred HHHhhhhhhhhhhh
Q 001548 577 REILQSEVTNEFQE 590 (1056)
Q Consensus 577 ~eil~~~~~~~~~~ 590 (1056)
.++|.|||......
T Consensus 271 ~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 271 EELLEHPFLKQNSI 284 (313)
T ss_pred HHHhhChhhhcccc
Confidence 99999999987544
No 29
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.9e-33 Score=314.04 Aligned_cols=245 Identities=18% Similarity=0.170 Sum_probs=184.5
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCccc
Q 001548 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1056)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1056)
.+.+|+||||.+-....+ .++....+.+..-+.-.+.. ..+.++++.+||||+.+.+--.. .
T Consensus 12 ~Gsfg~VYKgrrK~t~~~--vAik~i~K~gr~~k~l~~l~-~ev~i~r~lkHpniv~m~esfEt--~------------- 73 (808)
T KOG0597|consen 12 EGSFGRVYKGRRKYTIQV--VAIKFIDKSGRNEKELKNLR-QEVRILRSLKHPNIVEMLESFET--S------------- 73 (808)
T ss_pred CCccceeeecccccceeE--EEEEEehhcCCchHHHHHHH-HHHHHHHhcCCcchhhHHHhhcc--c-------------
Confidence 457799999998322222 12222222221111111111 22568999999999986654221 1
Q ss_pred ccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcc
Q 001548 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1056)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~ 379 (1056)
..-+++.|||.| +|+.+|...+. ++++.++.|..|++.||.|||+.+|+|||+||.|||+...|.+|++|||+||.+
T Consensus 74 -~~~~vVte~a~g-~L~~il~~d~~-lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m 150 (808)
T KOG0597|consen 74 -AHLWVVTEYAVG-DLFTILEQDGK-LPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAM 150 (808)
T ss_pred -ceEEEEehhhhh-hHHHHHHhccC-CCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhc
Confidence 112357889998 99999988776 555599999999999999999999999999999999999999999999999887
Q ss_pred cccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcc
Q 001548 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1056)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~ 459 (1056)
...
T Consensus 151 ~~~----------------------------------------------------------------------------- 153 (808)
T KOG0597|consen 151 STN----------------------------------------------------------------------------- 153 (808)
T ss_pred ccC-----------------------------------------------------------------------------
Confidence 620
Q ss_pred cccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCCCCc---HHHHH
Q 001548 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDS---ERALA 536 (1056)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~f~~---~~~~~ 536 (1056)
+--+++.-|||.|||||++.+++|+..+|+|||||+||||+.|-++ ..-..
T Consensus 154 --------------------------t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~ 207 (808)
T KOG0597|consen 154 --------------------------TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQ 207 (808)
T ss_pred --------------------------ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 1123467899999999999999999999999999999999987444 33344
Q ss_pred HHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhh
Q 001548 537 AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1056)
Q Consensus 537 ~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~ 590 (1056)
....++.+...||. ..+..+..|+..+|.+||.+|.|..+++.|||..+...
T Consensus 208 Lv~~I~~d~v~~p~--~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~~ 259 (808)
T KOG0597|consen 208 LVKSILKDPVKPPS--TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKIN 259 (808)
T ss_pred HHHHHhcCCCCCcc--cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhhh
Confidence 44455556555554 66899999999999999999999999999999987543
No 30
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=1.3e-31 Score=283.38 Aligned_cols=312 Identities=16% Similarity=0.209 Sum_probs=254.8
Q ss_pred hhhhccccCCCCCcccccccccccccccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEE
Q 001548 705 SMRSQIQLSDSDSTTRADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICS 784 (1056)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~s 784 (1056)
.+.+....++|...+ .-.+++.||.+||.+++++. ...-..+++.|++++|||+.++....++ .||...|..
T Consensus 127 k~~~~~~rPeWHapw-Kl~rVi~gHlgWVr~vavdP--~n~wf~tgs~DrtikIwDlatg~Lkltl-----tGhi~~vr~ 198 (460)
T KOG0285|consen 127 KKASRMPRPEWHAPW-KLYRVISGHLGWVRSVAVDP--GNEWFATGSADRTIKIWDLATGQLKLTL-----TGHIETVRG 198 (460)
T ss_pred hccccCCCccccCcc-eehhhhhhccceEEEEeeCC--CceeEEecCCCceeEEEEcccCeEEEee-----cchhheeee
Confidence 334445556777665 33578999999999998832 3334458999999999999988765444 599999999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceE
Q 001548 785 ISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTV 864 (1056)
Q Consensus 785 v~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v 864 (1056)
++|++-..|+++++.|+.|+.||++. ........+|-+.|+|++.+|. -..|+||+.|.++++||+++...+
T Consensus 199 vavS~rHpYlFs~gedk~VKCwDLe~-------nkvIR~YhGHlS~V~~L~lhPT-ldvl~t~grDst~RvWDiRtr~~V 270 (460)
T KOG0285|consen 199 VAVSKRHPYLFSAGEDKQVKCWDLEY-------NKVIRHYHGHLSGVYCLDLHPT-LDVLVTGGRDSTIRVWDIRTRASV 270 (460)
T ss_pred eeecccCceEEEecCCCeeEEEechh-------hhhHHHhccccceeEEEecccc-ceeEEecCCcceEEEeeecccceE
Confidence 99999999999999999999999984 3445566799999999999998 889999999999999999999999
Q ss_pred EEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEEEeCCCeEEEEEc
Q 001548 865 SHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDL 943 (1056)
Q Consensus 865 ~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDl 943 (1056)
..+.+|...|.+|.+.|.|+ .++|||.|++|++||++.++.+.++. |+..|.|++.+|... .||++|.|+ |+.|++
T Consensus 271 ~~l~GH~~~V~~V~~~~~dp-qvit~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~-~fASas~dn-ik~w~~ 347 (460)
T KOG0285|consen 271 HVLSGHTNPVASVMCQPTDP-QVITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKEN-LFASASPDN-IKQWKL 347 (460)
T ss_pred EEecCCCCcceeEEeecCCC-ceEEecCCceEEEeeeccCceeEeeecccceeeEEecCCchh-hhhccCCcc-ceeccC
Confidence 99999999999999999665 48999999999999999999988876 567899999999975 888888775 999999
Q ss_pred CCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeE
Q 001548 944 RNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFT 1023 (1056)
Q Consensus 944 r~~~~~~~~l~gH~~~V~~l~fs~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~ 1023 (1056)
..+.. +..+.+|..-|.++....++++++|+..|.+.+||.+.+.. .+.+ ++-.-.+--..+.+++ .+
T Consensus 348 p~g~f-~~nlsgh~~iintl~~nsD~v~~~G~dng~~~fwdwksg~n--------yQ~~--~t~vqpGSl~sEagI~-as 415 (460)
T KOG0285|consen 348 PEGEF-LQNLSGHNAIINTLSVNSDGVLVSGGDNGSIMFWDWKSGHN--------YQRG--QTIVQPGSLESEAGIF-AS 415 (460)
T ss_pred Cccch-hhccccccceeeeeeeccCceEEEcCCceEEEEEecCcCcc--------cccc--cccccCCcccccccee-EE
Confidence 98876 45589999999999999899999999999999999984321 1111 1110011111222333 55
Q ss_pred EeeCCCCEEEEEEcCCcEEEEeCC
Q 001548 1024 IFNLSDCWLLLVCFDFTTLSFRTS 1047 (1056)
Q Consensus 1024 ~~s~~g~~l~s~s~D~~v~iW~v~ 1047 (1056)
||.-.|..|++|..|.+|.+|.-+
T Consensus 416 ~fDktg~rlit~eadKtIk~~keD 439 (460)
T KOG0285|consen 416 CFDKTGSRLITGEADKTIKMYKED 439 (460)
T ss_pred eecccCceEEeccCCcceEEEecc
Confidence 688899999999999999999754
No 31
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=6.7e-34 Score=320.61 Aligned_cols=466 Identities=18% Similarity=0.151 Sum_probs=326.2
Q ss_pred cccccc-cceecccccCCcccccccccccCCcccccccccccccccCCCCCCCchhhhhhcccCccCccccCCCCCCCCC
Q 001548 4 MDEGVG-EVAPVNAAEGAPLQNKEIEYSLRPESCNNVLESGEMAIPEGTSSDGSFQILADMLEGKSVNRIVSPMDASENP 82 (1056)
Q Consensus 4 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (1056)
|+++.+ ++.++|.+...|+|.|..|.|+++ +...++.-.++.++++ ++-.+++.+- +.-..+...+
T Consensus 1 ~~~~~~~~~~~~e~~~~~q~~ik~~e~s~~~-~~~~~~~~~~~~~sr~----------a~~~e~~~~~--~~~g~~~~~~ 67 (516)
T KOG1033|consen 1 RNQEPVMERQRIERVATVQTQIKAREDSFPA-NKSKVRHNKRVITSRE----------ANDFEPGQCL--GRGGFGVVFS 67 (516)
T ss_pred CCCCCCCCcCccccceeeeeeeccccccccc-cccchhhhhhhhhhhh----------hccccccccc--cccCccccCC
Confidence 577788 999999999999999999999997 6777777777776655 1111111110 0111233344
Q ss_pred CCCCCCCcCceEEEEeecccCCCcceeeeccCcccccccc-cccccceeeccCCCCCCCCCCCCCCCccccccccccCCC
Q 001548 83 CPHSDSDAGIMVEELTVRKSNSSNLAIVGTSNHRERISTR-HDRWQHLYQLGSGSGSGSSRGDRGHGRTMLGAWEDVGDT 161 (1056)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (1056)
.+..+++++..||+|||+||..++..+++...+..+-..- .-+..|.|..+.+.+.--.+.-....+......++++..
T Consensus 68 ~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~~~~~~~qe~~d~~~l~~~~~~~~~~l~sl 147 (516)
T KOG1033|consen 68 AQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAWYERPPLGWQEEMDLKLLDDETSSERSNLPSL 147 (516)
T ss_pred ccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhheeceecCCCCcccchhhhhhhhccCCcchhccccc
Confidence 4678888899999999999999999888877776544443 566777778777776544432234455566667777777
Q ss_pred Ccccccc-ccccccchhhHhhhcccccccCCcCCccccCcceeeecccCCchhHHHhhhccccceeeeCCCCCccccccc
Q 001548 162 SLHDFIT-QKPLNDEHNTILEQSANTENDGLSGNMLSHGSIRTKMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAFKERRG 240 (1056)
Q Consensus 162 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~g~Gvv~~g~~~~~~~~~~~ 240 (1056)
++++.-. +..+.-......+++...+..+++.++..|.+..+++++..++..+...++..||+.-..|+..........
T Consensus 148 ~~~~~~~~q~~~~~~~~~A~e~s~~~~~~~v~~~~~s~s~~~~~s~s~~~~~~~~~rk~s~~k~~~~~~~~~tdsd~~ed 227 (516)
T KOG1033|consen 148 SERRTSKRQTAELPRVSAAAESSFHVFRAIVPVENQSHSQESSSSISQHNGSRSEFRKTSVSKASRFEGPDCTDSDLEED 227 (516)
T ss_pred cchhccchhhhhcccccccchhhhccccccCchhhcccCcccccchhhcccchhhhhhhhhccccccCCCcccccccccc
Confidence 7776655 333344555666777778888899999999999999999999999999999999999999987544444111
Q ss_pred ccccccccc----------------ccC-----Cch--------hHHHHhhhhhhcc-C----CCCCCCcccceeeecCC
Q 001548 241 MIDTKAFVT----------------TTM-----PSD--------AALKAAGAMMVAS-N----ASPKPVGVGTAVVSNGS 286 (1056)
Q Consensus 241 ~~~~~~~~~----------------~~~-----~~~--------~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~ 286 (1056)
+.+.-.... ... .+. ..+-+.....+.+ + ....+..+.....++..
T Consensus 228 ~~~~~~s~~~~~~~~~~s~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~s 307 (516)
T KOG1033|consen 228 EMQGSDSKESSRHEESGSSSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNRS 307 (516)
T ss_pred ccccCcccCcccccccccccccccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCcc
Confidence 111100000 000 000 0000000000111 0 00111111111111111
Q ss_pred CC----------CCcCCCCCcccccCCCcccccCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHhhhcCccccc
Q 001548 287 LD----------LGARTGVPASCWIGGLRQGSSDHGVNLREWLNA--RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLD 354 (1056)
Q Consensus 287 ~~----------~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~--~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrD 354 (1056)
.. .......+.. -..+.|.+|.-.+|.+||.. .+...+....+.++.|+..|++| +|.+|||
T Consensus 308 ~~~d~~~s~~~~~~~~~v~~~~---~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrd 381 (516)
T KOG1033|consen 308 ILEDLRPSLFESSKRNKVGKKV---YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRD 381 (516)
T ss_pred cccCCCCchhhhcccccccccc---chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhh
Confidence 10 0001111111 14568999999999999953 44567788899999999999999 9999999
Q ss_pred CCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCC
Q 001548 355 LKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKY 434 (1056)
Q Consensus 355 LKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~ 434 (1056)
|||.||++..+.++||.|||+........
T Consensus 382 lkp~nif~~~d~q~kIgDFgl~ts~~~~~--------------------------------------------------- 410 (516)
T KOG1033|consen 382 LKPSNIFFSDDDQLKIGDFGLVTSQDKDE--------------------------------------------------- 410 (516)
T ss_pred ccccccccccchhhhhhhhhheeecccCC---------------------------------------------------
Confidence 99999999999999999999876543100
Q ss_pred CCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccch
Q 001548 435 GNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSN 514 (1056)
Q Consensus 435 ~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sD 514 (1056)
+...+....+..+||+|||+||+|.|..|+.++|
T Consensus 411 ----------------------------------------------~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvd 444 (516)
T KOG1033|consen 411 ----------------------------------------------TVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVD 444 (516)
T ss_pred ----------------------------------------------cccchhhhhhhcccccccCCHHHHhhhhhhhhcc
Confidence 0001123345789999999999999999999999
Q ss_pred hHHHHHHHHHHhCCCCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 515 IYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 515 IwSLGvlL~eLlt~f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
|||||++||||+..|....+....+.+++++.+||.+....|....||++||++.|.+||++.+.--|+|.
T Consensus 445 IyaLGlil~EL~~~f~T~~er~~t~~d~r~g~ip~~~~~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 445 IYALGLILAELLIQFSTQFERIATLTDIRDGIIPPEFLQDYPEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred hhhHHHHHHHHHHHhccHHHHHHhhhhhhcCCCChHHhhcCcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999977776666653
No 32
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=7.2e-33 Score=297.92 Aligned_cols=270 Identities=18% Similarity=0.251 Sum_probs=231.8
Q ss_pred cCCC--CcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccc
Q 001548 742 QNPT--DRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVY 819 (1056)
Q Consensus 742 ~~~~--~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~ 819 (1056)
|.|+ ..++|+..|...+|+...+.-. ..+..|..+|.++.|+++|.++++|..+|.||+|+.+- ..
T Consensus 104 WtPeGRRLltgs~SGEFtLWNg~~fnFE-----tilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnm-------nn 171 (464)
T KOG0284|consen 104 WTPEGRRLLTGSQSGEFTLWNGTSFNFE-----TILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNM-------NN 171 (464)
T ss_pred EcCCCceeEeecccccEEEecCceeeHH-----HHhhhhcccceeEEEccCCCEEEEcCCCceEEecccch-------hh
Confidence 3554 5679999999999986443221 12458999999999999999999999999999999863 11
Q ss_pred cceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEE
Q 001548 820 YPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLW 899 (1056)
Q Consensus 820 ~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IW 899 (1056)
.......|...|.+++|+|+ ...|+|||.||+|+|||....+.-+.+.+|...|.|++|+| ...++||||.|..|++|
T Consensus 172 Vk~~~ahh~eaIRdlafSpn-DskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP-~kgLiasgskDnlVKlW 249 (464)
T KOG0284|consen 172 VKIIQAHHAEAIRDLAFSPN-DSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHP-TKGLIASGSKDNLVKLW 249 (464)
T ss_pred hHHhhHhhhhhhheeccCCC-CceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCC-ccceeEEccCCceeEee
Confidence 11222245589999999997 88999999999999999999888888899999999999999 77889999999999999
Q ss_pred ECCCCceeEEEe-CCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc--CCCEEEEEEC
Q 001548 900 NINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL--DSGTLVTAST 976 (1056)
Q Consensus 900 Dlr~~~~~~~~~-~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs--~~~~L~SgS~ 976 (1056)
|.+++.|+.++. |+..|..+.|+|++ ++|+++|.|..+++||+|+.+. +.++++|++.|.++.|+ ..++|+||+.
T Consensus 250 DprSg~cl~tlh~HKntVl~~~f~~n~-N~Llt~skD~~~kv~DiR~mkE-l~~~r~Hkkdv~~~~WhP~~~~lftsgg~ 327 (464)
T KOG0284|consen 250 DPRSGSCLATLHGHKNTVLAVKFNPNG-NWLLTGSKDQSCKVFDIRTMKE-LFTYRGHKKDVTSLTWHPLNESLFTSGGS 327 (464)
T ss_pred cCCCcchhhhhhhccceEEEEEEcCCC-CeeEEccCCceEEEEehhHhHH-HHHhhcchhhheeeccccccccceeeccC
Confidence 999999999986 67789999999999 5999999999999999997665 78899999999999998 5678999999
Q ss_pred CCeEEEEECCCCCCCCCCCCceeEEe-cCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeC
Q 001548 977 DNKLKLWDLKRTSHTGPSTNACSLTF-SGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRT 1046 (1056)
Q Consensus 977 Dg~IkiWdl~~~~~~~~~~~~~~~~~-~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v 1046 (1056)
||.|..|.+.... ++... .+|...|.+++ |+|-|..|++++.|.++++|.-
T Consensus 328 Dgsvvh~~v~~~~--------p~~~i~~AHd~~iwsl~-----------~hPlGhil~tgsnd~t~rfw~r 379 (464)
T KOG0284|consen 328 DGSVVHWVVGLEE--------PLGEIPPAHDGEIWSLA-----------YHPLGHILATGSNDRTVRFWTR 379 (464)
T ss_pred CCceEEEeccccc--------cccCCCcccccceeeee-----------ccccceeEeecCCCcceeeecc
Confidence 9999999987322 22222 47999999999 9999999999999999999974
No 33
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.5e-33 Score=301.80 Aligned_cols=314 Identities=13% Similarity=0.105 Sum_probs=202.3
Q ss_pred CchhHHHhhhcc-c-cceeeeCCCCCc--cccccccccc---cccccccCCchhHHHHhhhhhhccCCCCCCCcccceee
Q 001548 210 GFSEFFVKTTLK-G-KGIVCRGPPLNA--FKERRGMIDT---KAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVV 282 (1056)
Q Consensus 210 ~~~~~~~k~~~~-g-~Gvv~~g~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (1056)
|+.-|.+-+.|+ | .|+||.....+. +.+...++.. ..++-.|..++ ..++..+.||-++++-..-.
T Consensus 75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE-------~eIL~~lDHPFlPTLYa~fe 147 (459)
T KOG0610|consen 75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTE-------REILSLLDHPFLPTLYASFE 147 (459)
T ss_pred CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHH-------HHHHHhcCCCccchhhheee
Confidence 556677767666 4 499999877542 1111111111 11111112222 34577789999998665544
Q ss_pred ecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHH-HhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEE
Q 001548 283 SNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWL-NARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFK 361 (1056)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l-~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NIL 361 (1056)
.+.-.+ ..||||.||+|..++ ++.++.+++..++.|+..|+.||+|||-+|||.|||||+|||
T Consensus 148 t~~~~c----------------l~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENIL 211 (459)
T KOG0610|consen 148 TDKYSC----------------LVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENIL 211 (459)
T ss_pred ccceeE----------------EEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeE
Confidence 333333 489999999999988 445677888899999999999999999999999999999999
Q ss_pred EccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCccccc
Q 001548 362 LLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETA 441 (1056)
Q Consensus 362 l~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (1056)
|-++|+|.|+||-|+..+.- .+ .+ ....-. .......+ .. .++.+-|....-. ....
T Consensus 212 vredGHIMLsDFDLS~~~~~--~P---t~---~~s~~~------~~~~~~~~--~~------~~~~s~f~~r~~~-~~~~ 268 (459)
T KOG0610|consen 212 VREDGHIMLSDFDLSLRCPV--SP---TL---VKSSSP------RSSGSQPS--CR------SRQPSCFSPRCLS-SSKK 268 (459)
T ss_pred EecCCcEEeeeccccccCCC--CC---ee---eccCCC------CCCCCCcc--cc------cccccccccchhc-cccc
Confidence 99999999999999877631 00 00 000000 00000000 00 0000000000000 0000
Q ss_pred ccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHH
Q 001548 442 NESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVL 521 (1056)
Q Consensus 442 ~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvl 521 (1056)
. .+ .+.+.. .+.|.. .+......-...+||-.|.|||+|.|...+.++|+|+|||+
T Consensus 269 ~-~k-~~~~~~--------------------~~~p~~--~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIf 324 (459)
T KOG0610|consen 269 R-KK-KDESAS--------------------RSLPEL--VAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIF 324 (459)
T ss_pred c-cc-cccccc--------------------ccchhh--hcCCCCccccccccccccccceeeecCCCCchhhHHHHHHH
Confidence 0 00 011100 000000 00001112237899999999999999999999999999999
Q ss_pred HHHHhC---CCCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCC----HHHHhhhhhhhhhhhhch
Q 001548 522 FFELFG---RFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT----TREILQSEVTNEFQEVCA 593 (1056)
Q Consensus 522 L~eLlt---~f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt----~~eil~~~~~~~~~~~~~ 593 (1056)
|||||. ||.+.........++....-.|..+..+..++|||+++|.+||++|.. |.||.+||||........
T Consensus 325 lYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLi 403 (459)
T KOG0610|consen 325 LYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALI 403 (459)
T ss_pred HHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChhhe
Confidence 999994 688888887777777766555555577788999999999999999998 999999999998876543
No 34
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-33 Score=310.32 Aligned_cols=219 Identities=18% Similarity=0.195 Sum_probs=166.0
Q ss_pred hhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Q 001548 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (1056)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ 343 (1056)
.|..-+.||-|+.+-.-.+...++. .+++|+++|+|.++|++.| .+++..+++|+.||+.||+
T Consensus 126 ~l~~L~~hPgivkLy~TFQD~~sLY----------------FvLe~A~nGdll~~i~K~G-sfde~caR~YAAeIldAle 188 (604)
T KOG0592|consen 126 ALTQLSGHPGIVKLYFTFQDEESLY----------------FVLEYAPNGDLLDLIKKYG-SFDETCARFYAAEILDALE 188 (604)
T ss_pred HHHHhhCCCCeEEEEEEeecccceE----------------EEEEecCCCcHHHHHHHhC-cchHHHHHHHHHHHHHHHH
Confidence 3444448898886544433222222 1899999999999998886 4788799999999999999
Q ss_pred HhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccc
Q 001548 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (1056)
Q Consensus 344 ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 423 (1056)
|||++|||||||||+||||+.++++||+|||.|+.+........
T Consensus 189 ylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~------------------------------------ 232 (604)
T KOG0592|consen 189 YLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQE------------------------------------ 232 (604)
T ss_pred HHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhcccc------------------------------------
Confidence 99999999999999999999999999999999998763211000
Q ss_pred cccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCccc
Q 001548 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (1056)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 503 (1056)
+..... +.....++.+||..|.+||+
T Consensus 233 --------------------------------~~~~~~----------------------~a~s~~~SFVGTAeYVSPEl 258 (604)
T KOG0592|consen 233 --------------------------------NPVDPN----------------------QASSRRSSFVGTAEYVSPEL 258 (604)
T ss_pred --------------------------------CccCcc----------------------cccCcccceeeeecccCHHH
Confidence 000000 00001237899999999999
Q ss_pred ccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhc-cCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHH
Q 001548 504 LSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLR-DRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579 (1056)
Q Consensus 504 l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~-~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~ei 579 (1056)
|..+..++++|||+|||+||.|+.| |.+..+.....+++. .-.+|+.| ++...+|+.++|..||++|+|+.+|
T Consensus 259 L~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~~f---p~~a~dLv~KLLv~dp~~Rlt~~qI 335 (604)
T KOG0592|consen 259 LNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPEGF---PEDARDLIKKLLVRDPSDRLTSQQI 335 (604)
T ss_pred hcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCCCC---CHHHHHHHHHHHccCccccccHHHH
Confidence 9999999999999999999999986 544444433333332 23455555 5888899999999999999999999
Q ss_pred hhhhhhhhhhhhc
Q 001548 580 LQSEVTNEFQEVC 592 (1056)
Q Consensus 580 l~~~~~~~~~~~~ 592 (1056)
.+||||.......
T Consensus 336 k~HpFF~~Vdw~n 348 (604)
T KOG0592|consen 336 KAHPFFEGVDWEN 348 (604)
T ss_pred hhCcccccCChhh
Confidence 9999999865433
No 35
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-32 Score=312.31 Aligned_cols=242 Identities=20% Similarity=0.182 Sum_probs=183.6
Q ss_pred hhccccceeeeCCCCCccccccccccccccccccCCch-hHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCC
Q 001548 218 TTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD-AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1056)
Q Consensus 218 ~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1056)
...+++|+||+|.......+ +.+.......... ...-...+.++.+++||||+.+..+......
T Consensus 49 iG~G~~g~V~~~~~~g~~~v-----avK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~---------- 113 (362)
T KOG0192|consen 49 LGSGSFGTVYKGKWRGTDVV-----AVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPG---------- 113 (362)
T ss_pred cccCCceeEEEEEeCCceeE-----EEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC----------
Confidence 44568899999998422212 2222222221111 1122233567888999999987776442220
Q ss_pred cccccCCCcccccCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhcC-cccccCCCCCEEEccCC-cEEEeCc
Q 001548 297 ASCWIGGLRQGSSDHGVNLREWLNA-RGHKGKRIECLYIFRQIVALVDYHHTQG-VTFLDLKPSSFKLLQSN-QVKYIGP 373 (1056)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~-~~~~~~~~~~~~i~~QIl~gL~ylHs~g-IvHrDLKP~NILl~~~~-~vkl~Df 373 (1056)
. ..++|||++||+|+++|.. ....++...+..++.||+.||+|||+++ ||||||||+|||++..+ ++||+||
T Consensus 114 ~-----~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DF 188 (362)
T KOG0192|consen 114 S-----LCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADF 188 (362)
T ss_pred c-----eEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCC
Confidence 1 1259999999999999977 4678899899999999999999999999 99999999999999997 9999999
Q ss_pred chhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCC
Q 001548 374 IIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPH 453 (1056)
Q Consensus 374 gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~ 453 (1056)
|+++.....
T Consensus 189 Glsr~~~~~----------------------------------------------------------------------- 197 (362)
T KOG0192|consen 189 GLSREKVIS----------------------------------------------------------------------- 197 (362)
T ss_pred ccceeeccc-----------------------------------------------------------------------
Confidence 999875410
Q ss_pred CCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCccccc--CCCCCccchhHHHHHHHHHHhCC---
Q 001548 454 SHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS--GGVCTTSSNIYSLGVLFFELFGR--- 528 (1056)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~--~~~~t~~sDIwSLGvlL~eLlt~--- 528 (1056)
...++...||+.|||||++. ...|+.++|||||||+||||+|+
T Consensus 198 --------------------------------~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~P 245 (362)
T KOG0192|consen 198 --------------------------------KTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIP 245 (362)
T ss_pred --------------------------------cccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCC
Confidence 01122467999999999999 56899999999999999999985
Q ss_pred CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001548 529 FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 529 f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~ 582 (1056)
|..................|+....+++.+..|+.+||+.||.+||++.+|+..
T Consensus 246 f~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~ 299 (362)
T KOG0192|consen 246 FEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSR 299 (362)
T ss_pred CCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHH
Confidence 666666444455555555566566688999999999999999999999998763
No 36
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.98 E-value=7.2e-31 Score=280.60 Aligned_cols=284 Identities=22% Similarity=0.279 Sum_probs=237.2
Q ss_pred cccccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCC---CEEEEEeCCCcEE
Q 001548 728 DRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDE---DHFAAAGVSKKIK 804 (1056)
Q Consensus 728 gh~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg---~~latg~~Dg~I~ 804 (1056)
-|++||.++.. .+.-+|++++||++++|+.+ +++... +.||+++|.+++|.-.. ..|+++|.|.+++
T Consensus 103 ~hdDWVSsv~~----~~~~IltgsYDg~~riWd~~-Gk~~~~-----~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~ 172 (423)
T KOG0313|consen 103 LHDDWVSSVKG----ASKWILTGSYDGTSRIWDLK-GKSIKT-----IVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLR 172 (423)
T ss_pred cchhhhhhhcc----cCceEEEeecCCeeEEEecC-CceEEE-----EecCCcceeeeEEEecCCccceEEEecCCceEE
Confidence 48999999865 37788999999999999964 344333 45999999988886433 3699999999999
Q ss_pred EEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcC-------------------------
Q 001548 805 IFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDAC------------------------- 859 (1056)
Q Consensus 805 Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~------------------------- 859 (1056)
+|.++...+. ......-.||+..|-+|+..++ +..++|||+|.+|+||+..
T Consensus 173 Lw~~~~~~~~---~~~~~~~~GHk~~V~sVsv~~s-gtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~ 248 (423)
T KOG0313|consen 173 LWKWNVGENK---VKALKVCRGHKRSVDSVSVDSS-GTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGG 248 (423)
T ss_pred EEEecCchhh---hhHHhHhcccccceeEEEecCC-CCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhccc
Confidence 9999853221 1111222399999999999998 9999999999999999931
Q ss_pred CCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEeCCCCeEEEEEccCCCcEEEEEeCCCeEE
Q 001548 860 TGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTY 939 (1056)
Q Consensus 860 t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~~~~~V~sv~fsp~~~~~lasGs~Dg~V~ 939 (1056)
++.++.++.+|..+|.+|.|++ ...+.|+|.|.+|+.||+.++..+.++..+..++|+..+|... +||+||.|..++
T Consensus 249 ~r~P~vtl~GHt~~Vs~V~w~d--~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~-Ll~~gssdr~ir 325 (423)
T KOG0313|consen 249 TRTPLVTLEGHTEPVSSVVWSD--ATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSK-LLASGSSDRHIR 325 (423)
T ss_pred ccCceEEecccccceeeEEEcC--CCceEeecccceEEEEEeecccceeeeecCcceeEeecccccc-eeeecCCCCcee
Confidence 1236778889999999999996 6789999999999999999999999999999999999999875 999999999999
Q ss_pred EEEcCCCCc--ceEEecCCCCCeEEEEEcC--CCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEec
Q 001548 940 CYDLRNARA--PWCVLAGHEKAVSYVKFLD--SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRL 1015 (1056)
Q Consensus 940 lwDlr~~~~--~~~~l~gH~~~V~~l~fs~--~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~ 1015 (1056)
+||.|++.- +...|.||.++|.++.|+| ..+|+|||.|+++++||++. +..+++.+.+|.+.|.++.-.
T Consensus 326 l~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS-------~k~plydI~~h~DKvl~vdW~ 398 (423)
T KOG0313|consen 326 LWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRS-------TKAPLYDIAGHNDKVLSVDWN 398 (423)
T ss_pred ecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEecc-------CCCcceeeccCCceEEEEecc
Confidence 999998643 5678899999999999994 34599999999999999994 334789999999999888732
Q ss_pred CCcceeeEEeeCCCCEEEEEEcCCcEEEEeCC
Q 001548 1016 EHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTS 1047 (1056)
Q Consensus 1016 ~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~ 1047 (1056)
.+..+++||.|.+++|+.-.
T Consensus 399 ------------~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 399 ------------EGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred ------------CCceEEeccCcceEEEeccc
Confidence 45577999999999998754
No 37
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=99.98 E-value=7.3e-31 Score=286.93 Aligned_cols=295 Identities=21% Similarity=0.279 Sum_probs=249.4
Q ss_pred cccccccccccceeeecccccCCCC--cE-EEECCCeEEEEEccC----ceEEeEEEee-ee----cCCCCCEEEEEEcC
Q 001548 722 DNDLLRDRENLFLAQQDQEIQNPTD--RL-GAFFDGLCKYARYSK----FEVQGMLRTG-EF----NNSANVICSISFDR 789 (1056)
Q Consensus 722 ~~~~l~gh~~~v~~~~~~~~~~~~~--~l-s~s~D~~ikiw~~~~----~~~~~~l~~~-~l----~~h~~~V~sv~fsp 789 (1056)
...+++ |...|.++++ +|.. .| +++.|.+.++|++.. ......+++. ++ .-.+..|++++|+.
T Consensus 171 ~~kvl~-~~~~V~~~~W----nP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~ 245 (524)
T KOG0273|consen 171 KAKVLR-HESEVFICAW----NPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNN 245 (524)
T ss_pred ceeecc-CCCceEEEec----CchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecC
Confidence 345556 9999988876 4433 33 667888999998763 1111222221 11 12346799999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEec
Q 001548 790 DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIE 869 (1056)
Q Consensus 790 dg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~ 869 (1056)
+|..||||+.||.++||+... ........|+++|.+|.|+.. +++|++++.||++.+||..++.....|.-
T Consensus 246 ~G~~LatG~~~G~~riw~~~G--------~l~~tl~~HkgPI~slKWnk~-G~yilS~~vD~ttilwd~~~g~~~q~f~~ 316 (524)
T KOG0273|consen 246 DGTLLATGSEDGEARIWNKDG--------NLISTLGQHKGPIFSLKWNKK-GTYILSGGVDGTTILWDAHTGTVKQQFEF 316 (524)
T ss_pred CCCeEEEeecCcEEEEEecCc--------hhhhhhhccCCceEEEEEcCC-CCEEEeccCCccEEEEeccCceEEEeeee
Confidence 999999999999999999863 334455679999999999998 99999999999999999999999999999
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCc
Q 001548 870 HEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARA 948 (1056)
Q Consensus 870 H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~ 948 (1056)
|..+...|+|-. ..-|++++.|+.|+++.+....++.++. |++.|.++.|+|.+. +|+++|+|++++||.......
T Consensus 317 ~s~~~lDVdW~~--~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~-LLaS~SdD~TlkiWs~~~~~~ 393 (524)
T KOG0273|consen 317 HSAPALDVDWQS--NDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGS-LLASCSDDGTLKIWSMGQSNS 393 (524)
T ss_pred ccCCccceEEec--CceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCc-eEEEecCCCeeEeeecCCCcc
Confidence 999988999974 5679999999999999999999999886 678899999999997 999999999999999776554
Q ss_pred ceEEecCCCCCeEEEEEcCC----------CEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCc
Q 001548 949 PWCVLAGHEKAVSYVKFLDS----------GTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHN 1018 (1056)
Q Consensus 949 ~~~~l~gH~~~V~~l~fs~~----------~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~ 1018 (1056)
...+.+|.+.|..+.|+|. ..|++++.|++|++||+. .+.|+++|..|+.+|.+++
T Consensus 394 -~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~--------~gv~i~~f~kH~~pVysva----- 459 (524)
T KOG0273|consen 394 -VHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVE--------SGVPIHTLMKHQEPVYSVA----- 459 (524)
T ss_pred -hhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEcc--------CCceeEeeccCCCceEEEE-----
Confidence 6788999999999999842 359999999999999998 6789999999999999999
Q ss_pred ceeeEEeeCCCCEEEEEEcCCcEEEEeCCCCeEEE
Q 001548 1019 LFPFTIFNLSDCWLLLVCFDFTTLSFRTSWGCLLL 1053 (1056)
Q Consensus 1019 ~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~~~~~ 1053 (1056)
|+|+|+++++|+.|+.|.+|++..+.++-
T Consensus 460 ------fS~~g~ylAsGs~dg~V~iws~~~~~l~~ 488 (524)
T KOG0273|consen 460 ------FSPNGRYLASGSLDGCVHIWSTKTGKLVK 488 (524)
T ss_pred ------ecCCCcEEEecCCCCeeEeccccchheeE
Confidence 99999999999999999999999987754
No 38
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.98 E-value=5.9e-31 Score=274.07 Aligned_cols=255 Identities=23% Similarity=0.324 Sum_probs=225.3
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001548 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1056)
Q Consensus 774 ~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V 853 (1056)
.+.+|.+.|..+.|+|+|.+|||||.|..|.+|+... +........+|++.|..+.|.++ ++.|+|++.|.+|
T Consensus 42 ~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~g------dceN~~~lkgHsgAVM~l~~~~d-~s~i~S~gtDk~v 114 (338)
T KOG0265|consen 42 LLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYG------DCENFWVLKGHSGAVMELHGMRD-GSHILSCGTDKTV 114 (338)
T ss_pred hcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccc------cccceeeeccccceeEeeeeccC-CCEEEEecCCceE
Confidence 4679999999999999999999999999999999754 22333445599999999999998 9999999999999
Q ss_pred EEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEeCCCCeEEEEEccCCCcEEEEEe
Q 001548 854 KLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGS 933 (1056)
Q Consensus 854 ~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~~~~~V~sv~fsp~~~~~lasGs 933 (1056)
+.||+++|++++.+++|.+.|++++-+.-+..++.||++|+++++||+|+..+++++...-.++++.|..++. -+.+|+
T Consensus 115 ~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~s~-qv~sgg 193 (338)
T KOG0265|consen 115 RGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDTSD-QVISGG 193 (338)
T ss_pred EEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEeccccc-ceeecc
Confidence 9999999999999999999999999665567889999999999999999999999999889999999999887 677899
Q ss_pred CCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCc--EE
Q 001548 934 ADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNE--KV 1010 (1056)
Q Consensus 934 ~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~--Vv 1010 (1056)
-|+.|++||+|.... .+++.||..+|+.+..+ .+.++.|-+.|+++++||++...+ ..+|+..|.||.-. +.
T Consensus 194 Idn~ikvWd~r~~d~-~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p----~~R~v~if~g~~hnfekn 268 (338)
T KOG0265|consen 194 IDNDIKVWDLRKNDG-LYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAP----SQRCVKIFQGHIHNFEKN 268 (338)
T ss_pred ccCceeeeccccCcc-eEEeecccCceeeEEeccCCCccccccccceEEEEEecccCC----CCceEEEeecchhhhhhh
Confidence 999999999998876 78999999999999999 778899999999999999996544 56889999998543 22
Q ss_pred EEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCCe
Q 001548 1011 GICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWGC 1050 (1056)
Q Consensus 1011 ~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~~ 1050 (1056)
-|. +.|+|++.++..++.|..+.+||.-...
T Consensus 269 lL~---------cswsp~~~~i~ags~dr~vyvwd~~~r~ 299 (338)
T KOG0265|consen 269 LLK---------CSWSPNGTKITAGSADRFVYVWDTTSRR 299 (338)
T ss_pred cce---------eeccCCCCccccccccceEEEeeccccc
Confidence 232 3399999999999999999999988743
No 39
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=9e-33 Score=312.76 Aligned_cols=253 Identities=15% Similarity=0.125 Sum_probs=189.1
Q ss_pred ccCCchhHHHhhhccccceeeeCCCCCccccccccccccccccccCCchh--HHHHhhhhhhccCCCCCCCcccceeeec
Q 001548 207 SKSGFSEFFVKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDA--ALKAAGAMMVASNASPKPVGVGTAVVSN 284 (1056)
Q Consensus 207 ~~~~~~~~~~k~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (1056)
++..+-.-++|-..+-.|.||-...- ...+.+|.++-.+.-.. ..-......|+.+.|+|||.++..-.+.
T Consensus 270 dP~~~y~~~~kigqgaSG~vy~A~~~-------~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~ 342 (550)
T KOG0578|consen 270 DPRSKYTDFKKIGQGATGGVYVARKI-------STKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVG 342 (550)
T ss_pred Chhhhhcchhhhccccccceeeeeec-------cCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhccc
Confidence 34444555667777788999988652 11111111111111110 1122235678999999999866552222
Q ss_pred CCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEcc
Q 001548 285 GSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ 364 (1056)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~ 364 (1056)
..-+++|||++||+|.+.+... .+++.++..|++++|.||+|||.+||+|||||.+|||+..
T Consensus 343 ----------------deLWVVMEym~ggsLTDvVt~~--~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~ 404 (550)
T KOG0578|consen 343 ----------------DELWVVMEYMEGGSLTDVVTKT--RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTM 404 (550)
T ss_pred ----------------ceeEEEEeecCCCchhhhhhcc--cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEecc
Confidence 2246799999999999999765 4889999999999999999999999999999999999999
Q ss_pred CCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccc
Q 001548 365 SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANES 444 (1056)
Q Consensus 365 ~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (1056)
+|.+||+|||+|..+....
T Consensus 405 ~g~vKltDFGFcaqi~~~~------------------------------------------------------------- 423 (550)
T KOG0578|consen 405 DGSVKLTDFGFCAQISEEQ------------------------------------------------------------- 423 (550)
T ss_pred CCcEEEeeeeeeecccccc-------------------------------------------------------------
Confidence 9999999999997765210
Q ss_pred cccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHH
Q 001548 445 DINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFE 524 (1056)
Q Consensus 445 ~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~e 524 (1056)
..-++.+|||+|||||++....|++++||||||++++|
T Consensus 424 ------------------------------------------~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIE 461 (550)
T KOG0578|consen 424 ------------------------------------------SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIE 461 (550)
T ss_pred ------------------------------------------CccccccCCCCccchhhhhhcccCccccchhhhhHHHH
Confidence 00126799999999999999999999999999999999
Q ss_pred HhCC---CCcHHHHHHHHHhhccCCC-CCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhh
Q 001548 525 LFGR---FDSERALAAAMSDLRDRIL-PPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1056)
Q Consensus 525 Llt~---f~~~~~~~~~~~~~~~~~l-p~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~ 587 (1056)
|+-| |--+..+.++..+...+.+ -......++.+++|+.+||+.||.+|++|.|+|+||||..
T Consensus 462 MveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~ 528 (550)
T KOG0578|consen 462 MVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKM 528 (550)
T ss_pred HhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhh
Confidence 9975 3334444444444333332 2445578999999999999999999999999999999954
No 40
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.98 E-value=7.1e-33 Score=299.55 Aligned_cols=249 Identities=17% Similarity=0.142 Sum_probs=181.0
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcc
Q 001548 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1056)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1056)
..+.+|+||+|... +..+..|.++. -.|--.+...-..|+...|||||.++-.-......+ ..
T Consensus 33 G~GsFg~Vyq~~~~-------e~~~~vAIKKv--~~d~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d--------~~ 95 (364)
T KOG0658|consen 33 GSGSFGVVYQAKLR-------ETEEEVAIKKV--LQDKRYKNRELQIMRKLDHPNIVRLLYFFSSSTESD--------EV 95 (364)
T ss_pred eecccceEEEEEEc-------CCCceeEEEEe--cCCCCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCc--------hh
Confidence 34578999999872 22222222221 111112233334677889999998776655433221 12
Q ss_pred cccCCCcccccCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccC-CcEEEeCcc
Q 001548 299 CWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS-NQVKYIGPI 374 (1056)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~-~~vkl~Dfg 374 (1056)
| -+.+|||+ ..||.++++. .+..++..+++-|..||++||.|||+.||+||||||+|+|++++ |.+||+|||
T Consensus 96 ~---lnlVleym-P~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFG 171 (364)
T KOG0658|consen 96 Y---LNLVLEYM-PETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFG 171 (364)
T ss_pred H---HHHHHHhc-hHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCC
Confidence 2 12345554 5699999975 25567777999999999999999999999999999999999977 999999999
Q ss_pred hhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCC
Q 001548 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (1056)
Q Consensus 375 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~ 454 (1056)
.|+.+...+
T Consensus 172 SAK~L~~~e----------------------------------------------------------------------- 180 (364)
T KOG0658|consen 172 SAKVLVKGE----------------------------------------------------------------------- 180 (364)
T ss_pred cceeeccCC-----------------------------------------------------------------------
Confidence 998865110
Q ss_pred CCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccC-CCCCccchhHHHHHHHHHHhCC---CC
Q 001548 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FD 530 (1056)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~t~~sDIwSLGvlL~eLlt~---f~ 530 (1056)
.-.+...|..|+|||.+.| ..|+++.||||.||+++||+-| |+
T Consensus 181 ---------------------------------pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFp 227 (364)
T KOG0658|consen 181 ---------------------------------PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFP 227 (364)
T ss_pred ---------------------------------CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccC
Confidence 0016788999999999999 5699999999999999999975 77
Q ss_pred cHHHHHHHHHhhccCC------------------CC--------C-CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhh
Q 001548 531 SERALAAAMSDLRDRI------------------LP--------P-SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSE 583 (1056)
Q Consensus 531 ~~~~~~~~~~~~~~~~------------------lp--------~-~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~ 583 (1056)
++....++..+++--. +| . .+...+++..+|+.++|..+|.+|.++.|+|.||
T Consensus 228 G~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~ 307 (364)
T KOG0658|consen 228 GDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHP 307 (364)
T ss_pred CCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcch
Confidence 7765555533332110 11 1 2335678899999999999999999999999999
Q ss_pred hhhhhhhhc
Q 001548 584 VTNEFQEVC 592 (1056)
Q Consensus 584 ~~~~~~~~~ 592 (1056)
||.+.+++.
T Consensus 308 fFdelr~~~ 316 (364)
T KOG0658|consen 308 FFDELRDPN 316 (364)
T ss_pred hhHHhhCcC
Confidence 999988764
No 41
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=99.98 E-value=1.3e-30 Score=301.70 Aligned_cols=258 Identities=19% Similarity=0.297 Sum_probs=219.8
Q ss_pred cEEEECCCeEEEEEccCceE--------EeE------------------EEeeeecCCCCCEEEEEEcCCCCEEEEEeCC
Q 001548 747 RLGAFFDGLCKYARYSKFEV--------QGM------------------LRTGEFNNSANVICSISFDRDEDHFAAAGVS 800 (1056)
Q Consensus 747 ~ls~s~D~~ikiw~~~~~~~--------~~~------------------l~~~~l~~h~~~V~sv~fspdg~~latg~~D 800 (1056)
...||.|..+++|.+...+. ... .....+.+|+++|..++|+|+.++|++++.|
T Consensus 393 lA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg~sFsPd~rfLlScSED 472 (707)
T KOG0263|consen 393 LACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYGCSFSPDRRFLLSCSED 472 (707)
T ss_pred hhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceeeeeecccccceeeccCC
Confidence 33778899999999872110 000 0111478999999999999999999999999
Q ss_pred CcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEe
Q 001548 801 KKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFS 880 (1056)
Q Consensus 801 g~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fs 880 (1056)
++|++|.+.+ ....+...+|..+|.++.|+|. +-+|||||.|++-++|.....++++.|.+|-+.|.|++|+
T Consensus 473 ~svRLWsl~t-------~s~~V~y~GH~~PVwdV~F~P~-GyYFatas~D~tArLWs~d~~~PlRifaghlsDV~cv~FH 544 (707)
T KOG0263|consen 473 SSVRLWSLDT-------WSCLVIYKGHLAPVWDVQFAPR-GYYFATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFH 544 (707)
T ss_pred cceeeeeccc-------ceeEEEecCCCcceeeEEecCC-ceEEEecCCCceeeeeecccCCchhhhcccccccceEEEC
Confidence 9999999985 3445566799999999999998 9999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCC
Q 001548 881 QVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKA 959 (1056)
Q Consensus 881 p~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~ 959 (1056)
| +..+++|||.|.+|++||+.+|..+..|. |.++|.+|+|+|+|. +||+|+.||.|.+||+.+++. +..+.+|++.
T Consensus 545 P-Ns~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr-~LaSg~ed~~I~iWDl~~~~~-v~~l~~Ht~t 621 (707)
T KOG0263|consen 545 P-NSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGR-YLASGDEDGLIKIWDLANGSL-VKQLKGHTGT 621 (707)
T ss_pred C-cccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCc-eEeecccCCcEEEEEcCCCcc-hhhhhcccCc
Confidence 9 99999999999999999999999999997 778999999999996 999999999999999999876 7889999999
Q ss_pred eEEEEEc-CCCEEEEEECCCeEEEEECCCCCCC----------------CCCCCceeEEecCCCCcEEEEEec
Q 001548 960 VSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHT----------------GPSTNACSLTFSGHTNEKVGICRL 1015 (1056)
Q Consensus 960 V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~----------------~~~~~~~~~~~~gH~~~Vv~ls~~ 1015 (1056)
|.+|.|+ +++.||+|+.|++|++||+.+.... ...+..++.+|..-..+|+++.+.
T Consensus 622 i~SlsFS~dg~vLasgg~DnsV~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llgs~~tK~tpv~~l~Ft 694 (707)
T KOG0263|consen 622 IYSLSFSRDGNVLASGGADNSVRLWDLTKVIELLNLGHISTSNSAITQENNASSLLLGSFYTKNTPVVGLHFT 694 (707)
T ss_pred eeEEEEecCCCEEEecCCCCeEEEEEchhhcccccccccccccccccccCCCCcceeeeeeecCceEEEEEEe
Confidence 9999999 8999999999999999999753221 112234566666666666666643
No 42
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.97 E-value=1.7e-32 Score=308.02 Aligned_cols=231 Identities=12% Similarity=0.094 Sum_probs=156.5
Q ss_pred cccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhccccccc
Q 001548 305 RQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESAS 384 (1056)
Q Consensus 305 ~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~ 384 (1056)
..|||.+||++..+|...+. +++..++.|+.+++.|++.||+.|+|||||||+|+||+..|++||+|||||..+.....
T Consensus 218 LiMEylPGGD~mTLL~~~~~-L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~ 296 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLMRKDT-LTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHR 296 (550)
T ss_pred EEEEecCCccHHHHHHhcCc-CchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhh
Confidence 48999999999999987765 56669999999999999999999999999999999999999999999999976552211
Q ss_pred CCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCccccccc
Q 001548 385 LDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTN 464 (1056)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~ 464 (1056)
.+... .++.....+ .+ ....++...........+.
T Consensus 297 ~~~~~-~~~~~~~~~------------------~~------------------------~~~~~~~~~~~~~~~~~~~-- 331 (550)
T KOG0605|consen 297 IESYR-LDEQMQINL------------------SE------------------------AKPSDFPKFNTPRSTMSRR-- 331 (550)
T ss_pred hhhhc-chhhhhhhh------------------cc------------------------CCCccccccccccchhhHH--
Confidence 00000 000000000 00 0000111000000000000
Q ss_pred CCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCCCCc---HHHHHHHHHh
Q 001548 465 AGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDS---ERALAAAMSD 541 (1056)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~f~~---~~~~~~~~~~ 541 (1056)
.......+....-..+.+|||-|+|||++.+..|+..+|+||||||+||||.||++ +.....+-++
T Consensus 332 -----------~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI 400 (550)
T KOG0605|consen 332 -----------EQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKI 400 (550)
T ss_pred -----------HHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 00000001111223468999999999999999999999999999999999987544 4555555444
Q ss_pred hccC--CCCCCCCCCChhHHHHHHhccccCCCCCCC---HHHHhhhhhhhhhhhhch
Q 001548 542 LRDR--ILPPSFLSENPKEAGFCLWQLHPEPLSRPT---TREILQSEVTNEFQEVCA 593 (1056)
Q Consensus 542 ~~~~--~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt---~~eil~~~~~~~~~~~~~ 593 (1056)
+..+ ...|.-...+++..|||.+||. ||.+|.. +.||.+||||........
T Consensus 401 ~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W~~l 456 (550)
T KOG0605|consen 401 VNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDWDHL 456 (550)
T ss_pred HHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCcchh
Confidence 4433 2234445667899999999999 9999965 899999999998765544
No 43
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-32 Score=278.91 Aligned_cols=205 Identities=20% Similarity=0.168 Sum_probs=164.9
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
+.+-+-++||||+.+.+--.+++-+. .+.++++|++|..-|-++ ...++..+.++++|||++|
T Consensus 61 arIC~~LqHP~IvrL~~ti~~~~~~y----------------lvFe~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal 123 (355)
T KOG0033|consen 61 ARICRKLQHPNIVRLHDSIQEESFHY----------------LVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILEAL 123 (355)
T ss_pred HHHHHhcCCCcEeehhhhhcccceeE----------------EEEecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 34567789999998766544333333 267789999999877554 4577779999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccC---CcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQS---NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~---~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 419 (1056)
+|||.+||||||+||+|+|+.+. -.+|++|||++.++.+-
T Consensus 124 ~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g------------------------------------- 166 (355)
T KOG0033|consen 124 AYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDG------------------------------------- 166 (355)
T ss_pred HHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCc-------------------------------------
Confidence 99999999999999999999643 35999999999886510
Q ss_pred cccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCcc
Q 001548 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (1056)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 499 (1056)
......+|||.||
T Consensus 167 -------------------------------------------------------------------~~~~G~~GtP~fm 179 (355)
T KOG0033|consen 167 -------------------------------------------------------------------EAWHGFAGTPGYL 179 (355)
T ss_pred -------------------------------------------------------------------cccccccCCCccc
Confidence 0011578999999
Q ss_pred CcccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhcc--CCCCCCCCCCChhHHHHHHhccccCCCCCC
Q 001548 500 SPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRD--RILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (1056)
Q Consensus 500 APE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~--~~lp~~~~~~~~~~~~li~~lL~~dP~~Rp 574 (1056)
|||++...+|+.++|||+.||+||-||.| |.++.....+..+... ...+|.+...++..++|+.+||..||++|+
T Consensus 180 aPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRI 259 (355)
T KOG0033|consen 180 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRI 259 (355)
T ss_pred CHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhc
Confidence 99999999999999999999999999976 5554444444433332 344568999999999999999999999999
Q ss_pred CHHHHhhhhhhhhh
Q 001548 575 TTREILQSEVTNEF 588 (1056)
Q Consensus 575 t~~eil~~~~~~~~ 588 (1056)
|+.|.|+|||+.+.
T Consensus 260 ta~EAL~HpWi~~r 273 (355)
T KOG0033|consen 260 TADEALKHPWICNR 273 (355)
T ss_pred cHHHHhCCchhcch
Confidence 99999999999875
No 44
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=6.1e-31 Score=268.00 Aligned_cols=268 Identities=22% Similarity=0.375 Sum_probs=225.9
Q ss_pred CCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCe
Q 001548 753 DGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRD-EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKL 831 (1056)
Q Consensus 753 D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspd-g~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V 831 (1056)
.|.+-|-+......+...... .-.+.+..++|+++ .+.+++++.||+++|||+.. ..........|+..|
T Consensus 37 ~G~L~ile~~~~~gi~e~~s~---d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~------~s~Pi~~~kEH~~EV 107 (311)
T KOG0277|consen 37 NGRLFILEVTDPKGIQECQSY---DTEDGLFDVAWSENHENQVIAASGDGSLRLFDLTM------PSKPIHKFKEHKREV 107 (311)
T ss_pred CceEEEEecCCCCCeEEEEee---ecccceeEeeecCCCcceEEEEecCceEEEeccCC------CCcchhHHHhhhhhe
Confidence 355555555433344444432 33567899999986 56889999999999999653 122334556799999
Q ss_pred EEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEe
Q 001548 832 SCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK 911 (1056)
Q Consensus 832 ~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~ 911 (1056)
.++.|++.....++++|+|++||+||...++.+.+|.+|...|..+.|+|..+++|+++|.|+++++||+|.......+.
T Consensus 108 ~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ 187 (311)
T KOG0277|consen 108 YSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIE 187 (311)
T ss_pred EEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEE
Confidence 99999998888999999999999999999999999999999999999999999999999999999999999876555565
Q ss_pred -CCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCC--CEEEEEECCCeEEEEECCCC
Q 001548 912 -NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDS--GTLVTASTDNKLKLWDLKRT 988 (1056)
Q Consensus 912 -~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs~~--~~L~SgS~Dg~IkiWdl~~~ 988 (1056)
|...|.|+.|+.-..++++||+.|+.|++||+|+.+.|+..+.+|.-+|..|+|+|. ..|+|||.|-+++|||...+
T Consensus 188 ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ 267 (311)
T KOG0277|consen 188 AHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQ 267 (311)
T ss_pred eccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccc
Confidence 667999999999998999999999999999999999999999999999999999954 56999999999999999843
Q ss_pred CCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeC
Q 001548 989 SHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRT 1046 (1056)
Q Consensus 989 ~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v 1046 (1056)
..++.+..-|+..|.++.. +.+ ++.++++++||+.+.||+.
T Consensus 268 -------ds~~e~~~~HtEFv~g~Dw--------s~~--~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 268 -------DSAIETVDHHTEFVCGLDW--------SLF--DPGQVASTGWDELLYVWNP 308 (311)
T ss_pred -------hhhhhhhhccceEEecccc--------ccc--cCceeeecccccceeeecc
Confidence 2466778899999988872 223 6789999999999999986
No 45
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.97 E-value=1.2e-31 Score=282.32 Aligned_cols=276 Identities=18% Similarity=0.342 Sum_probs=234.1
Q ss_pred cceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCC
Q 001548 732 LFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNAL 811 (1056)
Q Consensus 732 ~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~ 811 (1056)
-|.++.+. -+..++|..|+++++||..+..+... +.||++.|.|+.|+ ...+++|+.|.+|+|||+++.
T Consensus 199 gVYClQYD----D~kiVSGlrDnTikiWD~n~~~c~~~-----L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tg 267 (499)
T KOG0281|consen 199 GVYCLQYD----DEKIVSGLRDNTIKIWDKNSLECLKI-----LTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTG 267 (499)
T ss_pred ceEEEEec----chhhhcccccCceEEeccccHHHHHh-----hhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCC
Confidence 46677662 24567899999999999887766544 45999999999996 569999999999999999862
Q ss_pred CCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCc---eEEEEecCCCcEEEEEEecCCCCEEE
Q 001548 812 FNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQ---TVSHYIEHEKRAWSVDFSQVHPTKLA 888 (1056)
Q Consensus 812 ~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~---~v~~~~~H~~~V~sv~fsp~d~~~la 888 (1056)
....+..+|...|..+.|+ +++++|+|.|.++++||+.... +.+.+.+|...|+.|+|+. .+++
T Consensus 268 -------e~l~tlihHceaVLhlrf~---ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~---kyIV 334 (499)
T KOG0281|consen 268 -------EPLNTLIHHCEAVLHLRFS---NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD---KYIV 334 (499)
T ss_pred -------chhhHHhhhcceeEEEEEe---CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeecccc---ceEE
Confidence 3344566899999999999 4599999999999999997654 4456779999999999964 6999
Q ss_pred EEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcC
Q 001548 889 SGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLD 967 (1056)
Q Consensus 889 Sgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs~ 967 (1056)
|+|.|.+|++|++.+..++.++. |.-+|-|+++. ..++++||.|.+|++||+..+.. +..+.||+.-|.++.| +
T Consensus 335 sASgDRTikvW~~st~efvRtl~gHkRGIAClQYr---~rlvVSGSSDntIRlwdi~~G~c-LRvLeGHEeLvRciRF-d 409 (499)
T KOG0281|consen 335 SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGAC-LRVLEGHEELVRCIRF-D 409 (499)
T ss_pred EecCCceEEEEeccceeeehhhhcccccceehhcc---CeEEEecCCCceEEEEeccccHH-HHHHhchHHhhhheee-c
Confidence 99999999999999999999997 66789999885 35999999999999999999887 7889999999999999 5
Q ss_pred CCEEEEEECCCeEEEEECCCCCCC-CCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeC
Q 001548 968 SGTLVTASTDNKLKLWDLKRTSHT-GPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRT 1046 (1056)
Q Consensus 968 ~~~L~SgS~Dg~IkiWdl~~~~~~-~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v 1046 (1056)
++.|+||+.||+|||||+.....+ .+...-|+.++..|++.|.++.+ |...+++++-|.+|+|||.
T Consensus 410 ~krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQF-------------D~fqIvsssHddtILiWdF 476 (499)
T KOG0281|consen 410 NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF-------------DEFQIISSSHDDTILIWDF 476 (499)
T ss_pred CceeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEee-------------cceEEEeccCCCeEEEEEc
Confidence 788999999999999999864433 34455689999999999999995 4567788999999999997
Q ss_pred CCC
Q 001548 1047 SWG 1049 (1056)
Q Consensus 1047 ~~~ 1049 (1056)
..+
T Consensus 477 l~~ 479 (499)
T KOG0281|consen 477 LNG 479 (499)
T ss_pred CCC
Confidence 654
No 46
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-32 Score=286.26 Aligned_cols=250 Identities=16% Similarity=0.196 Sum_probs=183.6
Q ss_pred CCchhHHHhhhcc--ccceeeeCC--CCCccccccccccccccccccCCchhHHHHhhh-hhhccCCCCCCCcccceeee
Q 001548 209 SGFSEFFVKTTLK--GKGIVCRGP--PLNAFKERRGMIDTKAFVTTTMPSDAALKAAGA-MMVASNASPKPVGVGTAVVS 283 (1056)
Q Consensus 209 ~~~~~~~~k~~~~--g~Gvv~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 283 (1056)
.+..+|-+.+|++ .+|.|..-+ .+...++ -.....+.. +.+-|..-...+ .++....||.++.+..-...
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYA-mKvL~k~~v----VklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d 115 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYA-MKVLDKQKV----VKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKD 115 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceee-hhhcCHHHH----HHHHHHHHHhhHHHHHhhccCceeEEEEEeecc
Confidence 3455788888887 446665433 3323333 111111111 112222222222 24555678888865533332
Q ss_pred cCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEc
Q 001548 284 NGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL 363 (1056)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~ 363 (1056)
+..+ ..+|+|.+||.|+.+|++.++..+ ..++.|+.||+.||+|||+++|++|||||+||||+
T Consensus 116 ~~~l----------------ymvmeyv~GGElFS~Lrk~~rF~e-~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD 178 (355)
T KOG0616|consen 116 NSNL----------------YMVMEYVPGGELFSYLRKSGRFSE-PHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLD 178 (355)
T ss_pred CCeE----------------EEEEeccCCccHHHHHHhcCCCCc-hhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeec
Confidence 2222 238999999999999998876544 49999999999999999999999999999999999
Q ss_pred cCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCccccccc
Q 001548 364 QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANE 443 (1056)
Q Consensus 364 ~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (1056)
.+|.+||+|||.|+...+.
T Consensus 179 ~~G~iKitDFGFAK~v~~r------------------------------------------------------------- 197 (355)
T KOG0616|consen 179 QNGHIKITDFGFAKRVSGR------------------------------------------------------------- 197 (355)
T ss_pred cCCcEEEEeccceEEecCc-------------------------------------------------------------
Confidence 9999999999999886520
Q ss_pred ccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHH
Q 001548 444 SDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFF 523 (1056)
Q Consensus 444 ~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~ 523 (1056)
..+.||||-|+|||++...+|+.++|.|||||++|
T Consensus 198 ---------------------------------------------T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIY 232 (355)
T KOG0616|consen 198 ---------------------------------------------TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIY 232 (355)
T ss_pred ---------------------------------------------EEEecCCccccChHHhhcCCCCcchhHHHHHHHHH
Confidence 11789999999999999999999999999999999
Q ss_pred HHhCC---CCcHHHHHHHHHhhccCC-CCCCCCCCChhHHHHHHhccccCCCCC-----CCHHHHhhhhhhhhhh
Q 001548 524 ELFGR---FDSERALAAAMSDLRDRI-LPPSFLSENPKEAGFCLWQLHPEPLSR-----PTTREILQSEVTNEFQ 589 (1056)
Q Consensus 524 eLlt~---f~~~~~~~~~~~~~~~~~-lp~~~~~~~~~~~~li~~lL~~dP~~R-----pt~~eil~~~~~~~~~ 589 (1056)
||++| |........+.+++.... +|+.+ ++.+++|+.++|+.|-.+| ....+|..||||....
T Consensus 233 EMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~f---s~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~ 304 (355)
T KOG0616|consen 233 EMLAGYPPFYDDNPIQIYEKILEGKVKFPSYF---SSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVD 304 (355)
T ss_pred HHHcCCCCCcCCChHHHHHHHHhCcccCCccc---CHHHHHHHHHHHhhhhHhhhcCcCCCccccccCccccccc
Confidence 99987 444455555566666554 34444 8899999999999999999 4668999999998753
No 47
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=99.97 E-value=9.2e-30 Score=262.94 Aligned_cols=255 Identities=23% Similarity=0.364 Sum_probs=216.9
Q ss_pred eeeecCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECC
Q 001548 772 TGEFNNSANVICSISFDRD-EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYD 850 (1056)
Q Consensus 772 ~~~l~~h~~~V~sv~fspd-g~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~D 850 (1056)
++.+.+|++.|..++..+. .+.+.+++.|+++.+|++... +..-........+|...|..+..+++ +++.+|+++|
T Consensus 8 ~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~d--d~~~G~~~r~~~GHsH~v~dv~~s~d-g~~alS~swD 84 (315)
T KOG0279|consen 8 RGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSD--DIKYGVPVRRLTGHSHFVSDVVLSSD-GNFALSASWD 84 (315)
T ss_pred eeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccC--ccccCceeeeeeccceEecceEEccC-CceEEecccc
Confidence 3467799999999999886 678999999999999999863 22122234556789999999999998 9999999999
Q ss_pred CcEEEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEe-C--CCCeEEEEEccCC-C
Q 001548 851 GVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-N--IANVCCVQFSAHS-S 926 (1056)
Q Consensus 851 g~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~--~~~V~sv~fsp~~-~ 926 (1056)
+++++||+.+++..+.|.+|...|.+|+|++ |.+.++|||.|.+|++|++-. .+..++. + ..-|.||+|+|.. +
T Consensus 85 ~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~-dn~qivSGSrDkTiklwnt~g-~ck~t~~~~~~~~WVscvrfsP~~~~ 162 (315)
T KOG0279|consen 85 GTLRLWDLATGESTRRFVGHTKDVLSVAFST-DNRQIVSGSRDKTIKLWNTLG-VCKYTIHEDSHREWVSCVRFSPNESN 162 (315)
T ss_pred ceEEEEEecCCcEEEEEEecCCceEEEEecC-CCceeecCCCcceeeeeeecc-cEEEEEecCCCcCcEEEEEEcCCCCC
Confidence 9999999999999999999999999999999 889999999999999999985 4555554 2 5679999999984 4
Q ss_pred cEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCC
Q 001548 927 HLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGH 1005 (1056)
Q Consensus 927 ~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH 1005 (1056)
.+++++|.|++|++||+++.+. ...+.||++.|+.+.++ ++..++||+.||.+.+||++ .++++.++. |
T Consensus 163 p~Ivs~s~DktvKvWnl~~~~l-~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~--------~~k~lysl~-a 232 (315)
T KOG0279|consen 163 PIIVSASWDKTVKVWNLRNCQL-RTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLN--------EGKNLYSLE-A 232 (315)
T ss_pred cEEEEccCCceEEEEccCCcch-hhccccccccEEEEEECCCCCEEecCCCCceEEEEEcc--------CCceeEecc-C
Confidence 5999999999999999999775 67889999999999999 67779999999999999999 556666654 6
Q ss_pred CCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCCeEEE
Q 001548 1006 TNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWGCLLL 1053 (1056)
Q Consensus 1006 ~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~~~~~ 1053 (1056)
...|.+++ |+|+.-| ++...+..|+||+...+.++.
T Consensus 233 ~~~v~sl~-----------fspnryw-L~~at~~sIkIwdl~~~~~v~ 268 (315)
T KOG0279|consen 233 FDIVNSLC-----------FSPNRYW-LCAATATSIKIWDLESKAVVE 268 (315)
T ss_pred CCeEeeEE-----------ecCCcee-EeeccCCceEEEeccchhhhh
Confidence 77787887 7787666 556677889999999887664
No 48
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=9.7e-32 Score=289.45 Aligned_cols=250 Identities=22% Similarity=0.223 Sum_probs=182.4
Q ss_pred hHHHhhhcc-cc-ceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCC
Q 001548 213 EFFVKTTLK-GK-GIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1056)
Q Consensus 213 ~~~~k~~~~-g~-Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1056)
-|-+-.+|+ |. |.|-+.... ...+..++....+-...-..|...--..+.+|.+++||+|+.+-.+..-....
T Consensus 54 RyE~~etLGkGTYGKVk~A~e~--~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKI--- 128 (668)
T KOG0611|consen 54 RYEITETLGKGTYGKVKLAYEH--KSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKI--- 128 (668)
T ss_pred HHHHHHHhcCCcccceeehhhc--cCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceE---
Confidence 366666654 33 666666541 11111222222221211222322233345689999999999754442211111
Q ss_pred cCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEE
Q 001548 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1056)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl 370 (1056)
-++|||..||.|.+||..++. +++.++++||+||+.||.|||.++|+|||||.+||||+.++++||
T Consensus 129 -------------vivMEYaS~GeLYDYiSer~~-LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKI 194 (668)
T KOG0611|consen 129 -------------VIVMEYASGGELYDYISERGS-LSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKI 194 (668)
T ss_pred -------------EEEEEecCCccHHHHHHHhcc-ccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeee
Confidence 248999999999999988765 666699999999999999999999999999999999999999999
Q ss_pred eCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccC
Q 001548 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1056)
Q Consensus 371 ~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g 450 (1056)
+||||+..+..
T Consensus 195 ADFGLSNly~~--------------------------------------------------------------------- 205 (668)
T KOG0611|consen 195 ADFGLSNLYAD--------------------------------------------------------------------- 205 (668)
T ss_pred eccchhhhhcc---------------------------------------------------------------------
Confidence 99999876541
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCC-CccchhHHHHHHHHHHhCC-
Q 001548 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVC-TTSSNIYSLGVLFFELFGR- 528 (1056)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~-t~~sDIwSLGvlL~eLlt~- 528 (1056)
...++++||+|-|++||++.|.+| ++.+|.|||||+||.|+.|
T Consensus 206 -----------------------------------~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGt 250 (668)
T KOG0611|consen 206 -----------------------------------KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGT 250 (668)
T ss_pred -----------------------------------ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcc
Confidence 122448899999999999999998 7999999999999999965
Q ss_pred --CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001548 529 --FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1056)
Q Consensus 529 --f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~ 588 (1056)
|++.+.....-.+-++....|. .+.....||+|||..||.+|.|+.+|-.|=|++-.
T Consensus 251 MPFDG~Dhk~lvrQIs~GaYrEP~---~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvNwg 309 (668)
T KOG0611|consen 251 MPFDGRDHKRLVRQISRGAYREPE---TPSDASGLIRWMLMVNPERRATIEDIASHWWVNWG 309 (668)
T ss_pred cccCCchHHHHHHHhhcccccCCC---CCchHHHHHHHHHhcCcccchhHHHHhhhheeecc
Confidence 8887665554444444433332 24567799999999999999999999999888643
No 49
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=9.9e-32 Score=296.43 Aligned_cols=213 Identities=18% Similarity=0.142 Sum_probs=169.3
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
+++|....|||+|.++..- |-+....++ .+.|||..|.+.. .......+.+.+++.|++.++.||
T Consensus 159 IailKkl~H~nVV~LiEvL------DDP~s~~~Y--------lVley~s~G~v~w-~p~d~~els~~~Ar~ylrDvv~GL 223 (576)
T KOG0585|consen 159 IAILKKLHHPNVVKLIEVL------DDPESDKLY--------LVLEYCSKGEVKW-CPPDKPELSEQQARKYLRDVVLGL 223 (576)
T ss_pred HHHHHhcCCcCeeEEEEee------cCcccCceE--------EEEEeccCCcccc-CCCCcccccHHHHHHHHHHHHHHH
Confidence 4578889999999877651 111222232 2678888887653 322333378889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
+|||.||||||||||+|+||+.+|+|||+|||.+..+.....
T Consensus 224 EYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~-------------------------------------- 265 (576)
T KOG0585|consen 224 EYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSD-------------------------------------- 265 (576)
T ss_pred HHHHhcCeeccccchhheEEcCCCcEEeeccceeeecccCCc--------------------------------------
Confidence 999999999999999999999999999999999876541100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
......+...+|||.|+|||
T Consensus 266 ------------------------------------------------------------~~~d~~L~~tvGTPAF~APE 285 (576)
T KOG0585|consen 266 ------------------------------------------------------------EGSDDQLSRTVGTPAFFAPE 285 (576)
T ss_pred ------------------------------------------------------------cccHHHHhhcCCCccccchH
Confidence 00011233578999999999
Q ss_pred cccCCC----CCccchhHHHHHHHHHHhC---CCCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCC
Q 001548 503 ELSGGV----CTTSSNIYSLGVLFFELFG---RFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT 575 (1056)
Q Consensus 503 ~l~~~~----~t~~sDIwSLGvlL~eLlt---~f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt 575 (1056)
.+.++. .+++.|||||||+||.|+. ||-++.......+++..+...|..+.+++.+++||++||++||.+|++
T Consensus 286 ~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~ 365 (576)
T KOG0585|consen 286 LCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRIT 365 (576)
T ss_pred hhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheee
Confidence 998833 3789999999999999995 588887777777777777777888888999999999999999999999
Q ss_pred HHHHhhhhhhhhh
Q 001548 576 TREILQSEVTNEF 588 (1056)
Q Consensus 576 ~~eil~~~~~~~~ 588 (1056)
..+|..|||....
T Consensus 366 l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 366 LPDIKLHPWVTRD 378 (576)
T ss_pred hhhheecceeccC
Confidence 9999999999875
No 50
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.4e-31 Score=276.04 Aligned_cols=202 Identities=15% Similarity=0.151 Sum_probs=166.3
Q ss_pred CCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcC
Q 001548 270 ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQG 349 (1056)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~g 349 (1056)
-||+|+.+.+.-.+++-.- .+.+.|.-|.|+|+|.+.- .+++.+.+.|++||++||.|||.++
T Consensus 81 GHP~II~l~D~yes~sF~F----------------lVFdl~prGELFDyLts~V-tlSEK~tR~iMrqlfegVeylHa~~ 143 (411)
T KOG0599|consen 81 GHPYIIDLQDVYESDAFVF----------------LVFDLMPRGELFDYLTSKV-TLSEKETRRIMRQLFEGVEYLHARN 143 (411)
T ss_pred CCCcEEEeeeeccCcchhh----------------hhhhhcccchHHHHhhhhe-eecHHHHHHHHHHHHHHHHHHHHhh
Confidence 7999998877755444332 2667889999999997754 3566699999999999999999999
Q ss_pred cccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccc
Q 001548 350 VTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSL 429 (1056)
Q Consensus 350 IvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 429 (1056)
||||||||+|||++.+.++||+|||.+..+.
T Consensus 144 IVHRDLKpENILlddn~~i~isDFGFa~~l~------------------------------------------------- 174 (411)
T KOG0599|consen 144 IVHRDLKPENILLDDNMNIKISDFGFACQLE------------------------------------------------- 174 (411)
T ss_pred hhhcccChhheeeccccceEEeccceeeccC-------------------------------------------------
Confidence 9999999999999999999999999987754
Q ss_pred cCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccC---
Q 001548 430 FPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG--- 506 (1056)
Q Consensus 430 ~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~--- 506 (1056)
+...+...||||.|.|||.+..
T Consensus 175 -------------------------------------------------------~GekLrelCGTPgYLAPEtikC~m~ 199 (411)
T KOG0599|consen 175 -------------------------------------------------------PGEKLRELCGTPGYLAPETIKCSMY 199 (411)
T ss_pred -------------------------------------------------------CchhHHHhcCCCcccChhheeeecc
Confidence 1223457899999999999864
Q ss_pred ---CCCCccchhHHHHHHHHHHhCCCCcHHHHHHHH--HhhccC---CCCCCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001548 507 ---GVCTTSSNIYSLGVLFFELFGRFDSERALAAAM--SDLRDR---ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1056)
Q Consensus 507 ---~~~t~~sDIwSLGvlL~eLlt~f~~~~~~~~~~--~~~~~~---~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~e 578 (1056)
..|+..+|+|++||++|.||.|.+++-+..+++ ..+..+ .-.|.|...+...++||.+||+.||.+|.|+.|
T Consensus 200 e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake 279 (411)
T KOG0599|consen 200 ENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKE 279 (411)
T ss_pred cCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHH
Confidence 458899999999999999999877776655543 233333 335788888999999999999999999999999
Q ss_pred Hhhhhhhhhhhhhc
Q 001548 579 ILQSEVTNEFQEVC 592 (1056)
Q Consensus 579 il~~~~~~~~~~~~ 592 (1056)
+|+||||.......
T Consensus 280 ~LaHpff~q~~~~~ 293 (411)
T KOG0599|consen 280 ALAHPFFIQIAQQQ 293 (411)
T ss_pred HhcChHHHHHHHhc
Confidence 99999997754433
No 51
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=9.2e-30 Score=291.17 Aligned_cols=292 Identities=19% Similarity=0.275 Sum_probs=244.9
Q ss_pred ccccccccccceeeecccccCCCCc--EEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCC
Q 001548 723 NDLLRDRENLFLAQQDQEIQNPTDR--LGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVS 800 (1056)
Q Consensus 723 ~~~l~gh~~~v~~~~~~~~~~~~~~--ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~D 800 (1056)
...+-|-.+.|...++. .|+.. ..|+-...+|+++..+..+. -+.+|+..|.++....+|.+||||+.|
T Consensus 316 ~k~ivG~ndEI~Dm~~l---G~e~~~laVATNs~~lr~y~~~~~~c~------ii~GH~e~vlSL~~~~~g~llat~sKD 386 (775)
T KOG0319|consen 316 VKQIVGYNDEILDMKFL---GPEESHLAVATNSPELRLYTLPTSYCQ------IIPGHTEAVLSLDVWSSGDLLATGSKD 386 (775)
T ss_pred ehhhcCCchhheeeeec---CCccceEEEEeCCCceEEEecCCCceE------EEeCchhheeeeeecccCcEEEEecCC
Confidence 34455666677777662 33322 35666778999987776665 355999999999966688999999999
Q ss_pred CcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCc-----eEE----EEecCC
Q 001548 801 KKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQ-----TVS----HYIEHE 871 (1056)
Q Consensus 801 g~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~-----~v~----~~~~H~ 871 (1056)
+++++|.++. +...........+|.+.|.+++++......|+++|.|+++++|++...+ .+. +-..|.
T Consensus 387 ~svilWr~~~---~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHd 463 (775)
T KOG0319|consen 387 KSVILWRLNN---NCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHD 463 (775)
T ss_pred ceEEEEEecC---CcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhc
Confidence 9999999953 2222333445568999999999987767899999999999999997622 111 224699
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcce
Q 001548 872 KRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPW 950 (1056)
Q Consensus 872 ~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~ 950 (1056)
+.|+||+.+| +..+|||||.|++++||++.+.....++. |.-+|.||.|+|... ++||+|.|++|+||.+.+..+ +
T Consensus 464 KdIN~Vaia~-ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq-~laT~SgD~TvKIW~is~fSC-l 540 (775)
T KOG0319|consen 464 KDINCVAIAP-NDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQ-LLATCSGDKTVKIWSISTFSC-L 540 (775)
T ss_pred ccccceEecC-CCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccc-eeEeccCCceEEEEEecccee-e
Confidence 9999999999 88999999999999999999888888887 667899999999986 999999999999999999887 8
Q ss_pred EEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCC
Q 001548 951 CVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSD 1029 (1056)
Q Consensus 951 ~~l~gH~~~V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g 1029 (1056)
.+|.||+.+|..+.|. ++..|+||+.||.||||+++ ++.|+.++.+|.+.|.+|+ .++.+
T Consensus 541 kT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnik--------t~eC~~tlD~H~DrvWaL~-----------~~~~~ 601 (775)
T KOG0319|consen 541 KTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIK--------TNECEMTLDAHNDRVWALS-----------VSPLL 601 (775)
T ss_pred eeecCccceeEeeeeeeCCcEEEeccCCCcEEEEecc--------chhhhhhhhhccceeEEEe-----------ecCcc
Confidence 9999999999999998 78889999999999999998 7899999999999999999 56777
Q ss_pred CEEEEEEcCCcEEEEeCCC
Q 001548 1030 CWLLLVCFDFTTLSFRTSW 1048 (1056)
Q Consensus 1030 ~~l~s~s~D~~v~iW~v~~ 1048 (1056)
..++|++.|+.+.+|.-.+
T Consensus 602 ~~~~tgg~Dg~i~~wkD~T 620 (775)
T KOG0319|consen 602 DMFVTGGGDGRIIFWKDVT 620 (775)
T ss_pred ceeEecCCCeEEEEeecCc
Confidence 7889999999999998544
No 52
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-30 Score=298.02 Aligned_cols=253 Identities=19% Similarity=0.188 Sum_probs=188.5
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCC-CCCCCcccceeeecCCCCC
Q 001548 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNA-SPKPVGVGTAVVSNGSLDL 289 (1056)
Q Consensus 213 ~~~~k~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 289 (1056)
.|-+.+.++ .+|+||+...... ...-+.+...+...+...+...-...+++|.... ||||+.+..+........
T Consensus 36 ~Y~l~~~lG~G~Fg~v~~~~~~~t--g~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~- 112 (382)
T KOG0032|consen 36 KYELGRELGRGQFGVVYLCREKST--GKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY- 112 (382)
T ss_pred cEEehhhhCCCCceEEEEEEecCC--CceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE-
Confidence 355555554 5699999987431 1011122222222222222122223355778887 999998877755444222
Q ss_pred CcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccC----
Q 001548 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS---- 365 (1056)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~---- 365 (1056)
.+||+|.||.|++.|... . .++..+..+++||+.++.|||+.||+||||||+|||+...
T Consensus 113 ---------------lvmEL~~GGeLfd~i~~~-~-~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~ 175 (382)
T KOG0032|consen 113 ---------------LVMELCEGGELFDRIVKK-H-YSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGS 175 (382)
T ss_pred ---------------EEEEecCCchHHHHHHHc-c-CCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCC
Confidence 499999999999999776 3 8888999999999999999999999999999999999744
Q ss_pred CcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCccccccccc
Q 001548 366 NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (1056)
Q Consensus 366 ~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1056)
+.+|++|||++.....
T Consensus 176 ~~ik~~DFGla~~~~~---------------------------------------------------------------- 191 (382)
T KOG0032|consen 176 GRIKLIDFGLAKFIKP---------------------------------------------------------------- 191 (382)
T ss_pred CcEEEeeCCCceEccC----------------------------------------------------------------
Confidence 4799999999977541
Q ss_pred ccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHH
Q 001548 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL 525 (1056)
Q Consensus 446 i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eL 525 (1056)
...+...+||+.|+|||++.+.+|+..+||||+||++|.|
T Consensus 192 ----------------------------------------~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiL 231 (382)
T KOG0032|consen 192 ----------------------------------------GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYIL 231 (382)
T ss_pred ----------------------------------------CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHH
Confidence 1123378999999999999999999999999999999999
Q ss_pred hCCC---CcHHHHHHHHHhhccC--CCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001548 526 FGRF---DSERALAAAMSDLRDR--ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1056)
Q Consensus 526 lt~f---~~~~~~~~~~~~~~~~--~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~ 589 (1056)
++|+ .++.........++.. ...+.|...+..+.+|+..||..||..|+|+.++|+|||+....
T Consensus 232 L~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~ 300 (382)
T KOG0032|consen 232 LSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSIG 300 (382)
T ss_pred hhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCCc
Confidence 9874 4444333333333332 34567888899999999999999999999999999999998753
No 53
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=2.2e-31 Score=278.43 Aligned_cols=212 Identities=22% Similarity=0.271 Sum_probs=167.0
Q ss_pred hhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHH
Q 001548 265 MVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH-KGKRIECLYIFRQIVALVD 343 (1056)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~-~~~~~~~~~i~~QIl~gL~ 343 (1056)
....+.|||||+++++ |..... ++. | -.++||.++||.|+..|..++. .+++.++-.|++||..||.
T Consensus 108 Hw~~s~h~~iV~IidV--yeNs~~-----~rk--c---LLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~ 175 (400)
T KOG0604|consen 108 HWMASGHPHIVSIIDV--YENSYQ-----GRK--C---LLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVR 175 (400)
T ss_pred hhhhcCCCceEEeehh--hhhhcc-----Cce--e---eEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHH
Confidence 3567799999987776 222211 111 1 3468999999999999987764 5778899999999999999
Q ss_pred HhhhcCcccccCCCCCEEEccC---CcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccc
Q 001548 344 YHHTQGVTFLDLKPSSFKLLQS---NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (1056)
Q Consensus 344 ylHs~gIvHrDLKP~NILl~~~---~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 420 (1056)
|||+++|+||||||+|+|.... ..+|++|||+|+...++
T Consensus 176 ~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~-------------------------------------- 217 (400)
T KOG0604|consen 176 YLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEP-------------------------------------- 217 (400)
T ss_pred HHHhcchhhccCChhheeeecCCCCcceEecccccccccCCC--------------------------------------
Confidence 9999999999999999999744 46999999999875421
Q ss_pred ccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccC
Q 001548 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (1056)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 500 (1056)
..+.+.+-||+|.|
T Consensus 218 ------------------------------------------------------------------~~L~TPc~TPyYva 231 (400)
T KOG0604|consen 218 ------------------------------------------------------------------GDLMTPCFTPYYVA 231 (400)
T ss_pred ------------------------------------------------------------------ccccCCcccccccC
Confidence 12336788999999
Q ss_pred cccccCCCCCccchhHHHHHHHHHHhCCCCcHHH-HHH-----HHHhhccC---CCCCCCCCCChhHHHHHHhccccCCC
Q 001548 501 PEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA-LAA-----AMSDLRDR---ILPPSFLSENPKEAGFCLWQLHPEPL 571 (1056)
Q Consensus 501 PE~l~~~~~t~~sDIwSLGvlL~eLlt~f~~~~~-~~~-----~~~~~~~~---~lp~~~~~~~~~~~~li~~lL~~dP~ 571 (1056)
||++....|+.++|+|||||++|-|||||+++-. +-. +...++.+ ...|.|...+...+++|+.||..+|.
T Consensus 232 Pevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~Pt 311 (400)
T KOG0604|consen 232 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPT 311 (400)
T ss_pred HHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCch
Confidence 9999999999999999999999999999877621 111 11122222 23366778888899999999999999
Q ss_pred CCCCHHHHhhhhhhhhhhhhc
Q 001548 572 SRPTTREILQSEVTNEFQEVC 592 (1056)
Q Consensus 572 ~Rpt~~eil~~~~~~~~~~~~ 592 (1056)
+|.|+.+++.|||++......
T Consensus 312 eRlTI~~~m~hpwi~~~~~vp 332 (400)
T KOG0604|consen 312 ERLTIEEVMDHPWINQYEAVP 332 (400)
T ss_pred hheeHHHhhcCchhcccccCC
Confidence 999999999999999865443
No 54
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.97 E-value=6.8e-31 Score=293.89 Aligned_cols=204 Identities=14% Similarity=0.196 Sum_probs=152.5
Q ss_pred hhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Q 001548 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~g 341 (1056)
...++....||||+.+......... ...+|++++| +|.+++...+..++...++.+++||+.|
T Consensus 53 E~~~l~~l~h~niv~~~~~~~~~~~----------------~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~a 115 (288)
T cd07871 53 EVSLLKNLKHANIVTLHDIIHTERC----------------LTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRG 115 (288)
T ss_pred HHHHHHhCCCCCEeeEEEEEcCCCe----------------EEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 3456788899999986555322111 1147888886 9999998777777888999999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|+|||++||+||||||+|||++.++.+|++|||+++.....
T Consensus 116 L~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~--------------------------------------- 156 (288)
T cd07871 116 LSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVP--------------------------------------- 156 (288)
T ss_pred HHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCC---------------------------------------
Confidence 99999999999999999999999999999999988653310
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
........+|++|+||
T Consensus 157 ----------------------------------------------------------------~~~~~~~~~~~~y~aP 172 (288)
T cd07871 157 ----------------------------------------------------------------TKTYSNEVVTLWYRPP 172 (288)
T ss_pred ----------------------------------------------------------------CccccCceecccccCh
Confidence 0001134678899999
Q ss_pred ccccC-CCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhc--cC------------------CCCC--------
Q 001548 502 EELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLR--DR------------------ILPP-------- 549 (1056)
Q Consensus 502 E~l~~-~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~--~~------------------~lp~-------- 549 (1056)
|++.+ ..++.++|||||||++|||++| |.+...........+ .. .+|.
T Consensus 173 E~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (288)
T cd07871 173 DVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLIN 252 (288)
T ss_pred HHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHH
Confidence 99876 5689999999999999999987 433222211111110 00 0010
Q ss_pred CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 550 ~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
.....++++.+||.+||++||.+|||+.|+|+||||
T Consensus 253 ~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 253 HAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred hCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 112356778999999999999999999999999997
No 55
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.97 E-value=6.4e-31 Score=299.22 Aligned_cols=205 Identities=17% Similarity=0.174 Sum_probs=158.4
Q ss_pred hhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Q 001548 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~g 341 (1056)
...++....||||+.+......+... ..+|||++|++|.+++...+ .+++..++.++.||+.|
T Consensus 45 e~~~l~~l~hp~i~~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~ 107 (323)
T cd05571 45 ESRVLQNTRHPFLTALKYSFQTHDRL----------------CFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSA 107 (323)
T ss_pred HHHHHHhCCCCCCCCEEEEEEcCCEE----------------EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHH
Confidence 34567788999999866553322211 14899999999999997654 56777999999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 108 L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~-------------------------------------- 149 (323)
T cd05571 108 LGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG-------------------------------------- 149 (323)
T ss_pred HHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC--------------------------------------
Confidence 999999999999999999999999999999999886532000
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
......+||+.|+||
T Consensus 150 -----------------------------------------------------------------~~~~~~~gt~~y~aP 164 (323)
T cd05571 150 -----------------------------------------------------------------ATMKTFCGTPEYLAP 164 (323)
T ss_pred -----------------------------------------------------------------CcccceecCccccCh
Confidence 001145799999999
Q ss_pred ccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCC----
Q 001548 502 EELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP---- 574 (1056)
Q Consensus 502 E~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rp---- 574 (1056)
|++.+..++.++|||||||+||||++| |................. ......++.+.+||.+||++||++||
T Consensus 165 E~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~ 242 (323)
T cd05571 165 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI--RFPRTLSPEAKSLLAGLLKKDPKQRLGGGP 242 (323)
T ss_pred hhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHccCCHHHcCCCCC
Confidence 999999999999999999999999986 333222222222222211 12234688899999999999999999
Q ss_pred -CHHHHhhhhhhhhh
Q 001548 575 -TTREILQSEVTNEF 588 (1056)
Q Consensus 575 -t~~eil~~~~~~~~ 588 (1056)
++.++++||||...
T Consensus 243 ~~~~~ll~h~~f~~~ 257 (323)
T cd05571 243 EDAKEIMEHRFFASI 257 (323)
T ss_pred CCHHHHHcCCCcCCC
Confidence 89999999999774
No 56
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.97 E-value=1.2e-27 Score=260.50 Aligned_cols=285 Identities=24% Similarity=0.307 Sum_probs=238.9
Q ss_pred cccccccccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcE
Q 001548 724 DLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKI 803 (1056)
Q Consensus 724 ~~l~gh~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg~I 803 (1056)
.++++|.+.+.++.+.. .....++++.|+.+++|++.+.+.... +..|...+.++.|+|+++++++++.|+.|
T Consensus 3 ~~~~~h~~~i~~~~~~~--~~~~l~~~~~~g~i~i~~~~~~~~~~~-----~~~~~~~i~~~~~~~~~~~l~~~~~~~~i 75 (289)
T cd00200 3 RTLKGHTGGVTCVAFSP--DGKLLATGSGDGTIKVWDLETGELLRT-----LKGHTGPVRDVAASADGTYLASGSSDKTI 75 (289)
T ss_pred hHhcccCCCEEEEEEcC--CCCEEEEeecCcEEEEEEeeCCCcEEE-----EecCCcceeEEEECCCCCEEEEEcCCCeE
Confidence 45678999999887722 223445777899999999876653322 44788899999999999999999999999
Q ss_pred EEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecCC
Q 001548 804 KIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVH 883 (1056)
Q Consensus 804 ~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d 883 (1056)
++|++... ........|...|.++.|+++ +.++++++.||.|++||+.+++.+..+..|...+.+++|+| +
T Consensus 76 ~i~~~~~~-------~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~ 146 (289)
T cd00200 76 RLWDLETG-------ECVRTLTGHTSYVSSVAFSPD-GRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSP-D 146 (289)
T ss_pred EEEEcCcc-------cceEEEeccCCcEEEEEEcCC-CCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcC-c
Confidence 99999741 223334467889999999997 78888888899999999999999999999999999999999 7
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEE
Q 001548 884 PTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSY 962 (1056)
Q Consensus 884 ~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~ 962 (1056)
+.++++++.|+.|++||+++++.+..+. +...|.+++|+|++. .+++++.|+.|++||+++.+. ...+..|...|.+
T Consensus 147 ~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~i~d~~~~~~-~~~~~~~~~~i~~ 224 (289)
T cd00200 147 GTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGE-KLLSSSSDGTIKLWDLSTGKC-LGTLRGHENGVNS 224 (289)
T ss_pred CCEEEEEcCCCcEEEEEccccccceeEecCccccceEEECCCcC-EEEEecCCCcEEEEECCCCce-ecchhhcCCceEE
Confidence 8888888889999999999888887776 445899999999996 677788899999999988654 5667789999999
Q ss_pred EEEcC-CCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcE
Q 001548 963 VKFLD-SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTT 1041 (1056)
Q Consensus 963 l~fs~-~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v 1041 (1056)
+.|++ +.++++++.|+.|++||+. ++.++..+.+|...+.+++ +++++.++++++.|+.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~i~i~~~~--------~~~~~~~~~~~~~~i~~~~-----------~~~~~~~l~~~~~d~~i 285 (289)
T cd00200 225 VAFSPDGYLLASGSEDGTIRVWDLR--------TGECVQTLSGHTNSVTSLA-----------WSPDGKRLASGSADGTI 285 (289)
T ss_pred EEEcCCCcEEEEEcCCCcEEEEEcC--------CceeEEEccccCCcEEEEE-----------ECCCCCEEEEecCCCeE
Confidence 99995 5567777779999999998 4567788889988888887 78899999999999999
Q ss_pred EEEe
Q 001548 1042 LSFR 1045 (1056)
Q Consensus 1042 ~iW~ 1045 (1056)
++|+
T Consensus 286 ~iw~ 289 (289)
T cd00200 286 RIWD 289 (289)
T ss_pred EecC
Confidence 9996
No 57
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.8e-30 Score=281.80 Aligned_cols=213 Identities=16% Similarity=0.142 Sum_probs=166.1
Q ss_pred hhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHH
Q 001548 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH-KGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~-~~~~~~~~~i~~QIl~gL 342 (1056)
..|.--.||||++..+..+++.. -+++|.|+.+|++.++|+..-+ .+++..+..|++++|.||
T Consensus 76 ~~msl~~HPNIv~~~~sFvv~~~----------------LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL 139 (516)
T KOG0582|consen 76 QTMSLIDHPNIVTYHCSFVVDSE----------------LWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKAL 139 (516)
T ss_pred HHhhhcCCCCcceEEEEEEecce----------------eEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHH
Confidence 34666799999975555444333 3469999999999999977533 488889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
+|||.+|-||||||+.||||+.+|.|||+|||.+..+.+++ .|
T Consensus 140 ~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G-----------~R-------------------------- 182 (516)
T KOG0582|consen 140 DYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG-----------DR-------------------------- 182 (516)
T ss_pred HHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccC-----------ce--------------------------
Confidence 99999999999999999999999999999999876655211 00
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
....+...+||++|||||
T Consensus 183 --------------------------------------------------------------~~~rf~tfvgtp~wmAPE 200 (516)
T KOG0582|consen 183 --------------------------------------------------------------QVTRFNTFVGTPCWMAPE 200 (516)
T ss_pred --------------------------------------------------------------eeEeeccccCcccccChH
Confidence 011113779999999999
Q ss_pred cccC--CCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCC--------CCCCChhHHHHHHhccccC
Q 001548 503 ELSG--GVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPS--------FLSENPKEAGFCLWQLHPE 569 (1056)
Q Consensus 503 ~l~~--~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~--------~~~~~~~~~~li~~lL~~d 569 (1056)
++.. ..|++|+||||||++..||.+| |..-.+....+..+.+.+..+. ....+..+..|+..||++|
T Consensus 201 vl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kD 280 (516)
T KOG0582|consen 201 VLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKD 280 (516)
T ss_pred HhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcC
Confidence 9765 5699999999999999999986 4444455555666665543111 1233456789999999999
Q ss_pred CCCCCCHHHHhhhhhhhhhhhh
Q 001548 570 PLSRPTTREILQSEVTNEFQEV 591 (1056)
Q Consensus 570 P~~Rpt~~eil~~~~~~~~~~~ 591 (1056)
|.+|||+.++|.|+||......
T Consensus 281 P~kRptAskLlkh~FFk~~k~~ 302 (516)
T KOG0582|consen 281 PSKRPTASKLLKHAFFKKAKSK 302 (516)
T ss_pred cccCCCHHHHhccHHHhhccch
Confidence 9999999999999999876443
No 58
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=2.9e-30 Score=311.33 Aligned_cols=198 Identities=27% Similarity=0.398 Sum_probs=163.3
Q ss_pred cccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhccccccc
Q 001548 305 RQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESAS 384 (1056)
Q Consensus 305 ~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~ 384 (1056)
+.|+||+..+|+++++.+...-....++++|+||++||.|+|++|||||||||.||+|++.+.|||+|||+|........
T Consensus 673 IQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~ 752 (1351)
T KOG1035|consen 673 IQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLE 752 (1351)
T ss_pred EEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhh
Confidence 57999999999999987755445668999999999999999999999999999999999999999999999987441000
Q ss_pred CCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCccccccc
Q 001548 385 LDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTN 464 (1056)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~ 464 (1056)
+.. + ...+....
T Consensus 753 --------~~d------------------------~----------------------------------~~~~~~~~-- 764 (1351)
T KOG1035|consen 753 --------SID------------------------Q----------------------------------DLSFSTNR-- 764 (1351)
T ss_pred --------hHh------------------------h----------------------------------ccCccccc--
Confidence 000 0 00000000
Q ss_pred CCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCC---CCccchhHHHHHHHHHHhCCCCcHHHHHHHHHh
Q 001548 465 AGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV---CTTSSNIYSLGVLFFELFGRFDSERALAAAMSD 541 (1056)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~---~t~~sDIwSLGvlL~eLlt~f~~~~~~~~~~~~ 541 (1056)
........|..+||.-|+|||++.+.. |+.|+|||||||+||||+.||.+..+....+..
T Consensus 765 -----------------~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yPF~TsMERa~iL~~ 827 (1351)
T KOG1035|consen 765 -----------------AGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYPFGTSMERASILTN 827 (1351)
T ss_pred -----------------cCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhccCCchHHHHHHHHh
Confidence 001123456899999999999998844 999999999999999999999999999999999
Q ss_pred hccCCCCCC---CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhh
Q 001548 542 LRDRILPPS---FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1056)
Q Consensus 542 ~~~~~lp~~---~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~ 587 (1056)
+|.+.+|.. +....+..+.+|+|||+.||++||||.|+|+|.||-.
T Consensus 828 LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llpp 876 (1351)
T KOG1035|consen 828 LRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLPP 876 (1351)
T ss_pred cccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence 999988877 7778899999999999999999999999999999853
No 59
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.97 E-value=4.6e-30 Score=286.85 Aligned_cols=211 Identities=17% Similarity=0.138 Sum_probs=152.2
Q ss_pred HHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhc-CCCCCHHHHHHHHHH
Q 001548 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQ 337 (1056)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~Q 337 (1056)
+......+....||||+.+.+......... .. .. ..+|+++. ++|.+++... ...+++..++.++.|
T Consensus 51 e~~~l~~l~~~~hpniv~~~~~~~~~~~~~----~~--~~-----~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~q 118 (290)
T cd07862 51 EVAVLRHLETFEHPNVVRLFDVCTVSRTDR----ET--KL-----TLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQ 118 (290)
T ss_pred HHHHHHhhcccCCCCcceEEEEEecccCCC----CC--cE-----EEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHH
Confidence 333334455567999998766543211111 00 01 13677776 5999999654 345778899999999
Q ss_pred HHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccc
Q 001548 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (1056)
Q Consensus 338 Il~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 417 (1056)
|+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 119 i~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----------------------------------- 163 (290)
T cd07862 119 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ----------------------------------- 163 (290)
T ss_pred HHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCC-----------------------------------
Confidence 999999999999999999999999999999999999988653310
Q ss_pred cccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCC
Q 001548 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (1056)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 497 (1056)
.......||++
T Consensus 164 ---------------------------------------------------------------------~~~~~~~~~~~ 174 (290)
T cd07862 164 ---------------------------------------------------------------------MALTSVVVTLW 174 (290)
T ss_pred ---------------------------------------------------------------------ccccccccccc
Confidence 00014568999
Q ss_pred ccCcccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccC--CCC-----------------------C
Q 001548 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDR--ILP-----------------------P 549 (1056)
Q Consensus 498 Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~--~lp-----------------------~ 549 (1056)
|+|||++.+..++.++|||||||++|||+++ |.+..........+... ..+ .
T Consensus 175 y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (290)
T cd07862 175 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEK 254 (290)
T ss_pred ccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHH
Confidence 9999999998999999999999999999986 43332222222211110 000 0
Q ss_pred CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 550 ~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
..+..++.+.+|+.+||++||++|||+.|+|+||||
T Consensus 255 ~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 255 FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred HccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 112456778899999999999999999999999997
No 60
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.97 E-value=1.1e-29 Score=304.71 Aligned_cols=261 Identities=18% Similarity=0.182 Sum_probs=179.8
Q ss_pred HHHhhhcc--ccceeeeCCCC-CccccccccccccccccccCC-chhHHHHhhhhhhccCCCCCCCcccceeeecCCCCC
Q 001548 214 FFVKTTLK--GKGIVCRGPPL-NAFKERRGMIDTKAFVTTTMP-SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1056)
Q Consensus 214 ~~~k~~~~--g~Gvv~~g~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1056)
|.+++.++ |+|+||++... ++..+ +.+........ .+..+.......+....|+|++.......+......
T Consensus 34 Y~i~~~LG~G~fG~Vy~a~~~~~g~~v-----AvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 34 YWISRVLGSGATGTVLCAKRVSDGEPF-----AVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred EEEEEEEecCCCEEEEEEEEcCCCCEE-----EEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 55555544 78999998642 11111 11111111111 111222333456677789998875443332221110
Q ss_pred CcCCCCCcccccCCCcccccCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCC
Q 001548 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNAR---GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366 (1056)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~---~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~ 366 (1056)
..... -..+|+|+.||+|.++|+.. ...+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 109 ---~~~~~-----i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~ 180 (496)
T PTZ00283 109 ---ENVLM-----IALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNG 180 (496)
T ss_pred ---ccceE-----EEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCC
Confidence 00000 12478999999999999653 34578889999999999999999999999999999999999999
Q ss_pred cEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccc
Q 001548 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1056)
Q Consensus 367 ~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 446 (1056)
.+||+|||+++.......
T Consensus 181 ~vkL~DFGls~~~~~~~~-------------------------------------------------------------- 198 (496)
T PTZ00283 181 LVKLGDFGFSKMYAATVS-------------------------------------------------------------- 198 (496)
T ss_pred CEEEEecccCeecccccc--------------------------------------------------------------
Confidence 999999999876541000
Q ss_pred cccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHh
Q 001548 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526 (1056)
Q Consensus 447 ~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLl 526 (1056)
.......+||+.|+|||++.+..++.++|||||||+||||+
T Consensus 199 ---------------------------------------~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLl 239 (496)
T PTZ00283 199 ---------------------------------------DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELL 239 (496)
T ss_pred ---------------------------------------ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 00001457999999999999999999999999999999999
Q ss_pred CC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001548 527 GR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1056)
Q Consensus 527 t~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~ 589 (1056)
++ |........ +........++.....++.+.+|+.+||++||.+||++.++++|||+....
T Consensus 240 tG~~Pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~~ 304 (496)
T PTZ00283 240 TLKRPFDGENMEEV-MHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLFI 304 (496)
T ss_pred HCCCCCCCCCHHHH-HHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHhh
Confidence 86 444332222 222233333444456788999999999999999999999999999987643
No 61
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=6.1e-28 Score=275.97 Aligned_cols=284 Identities=19% Similarity=0.321 Sum_probs=240.0
Q ss_pred cceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCC-CcEEEEEcCC
Q 001548 732 LFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVS-KKIKIFEFNA 810 (1056)
Q Consensus 732 ~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~D-g~I~Iwdl~t 810 (1056)
.|.++.++. ...-..+++..|...++.+..+.+...++ -....|..++|+..|+.||.|+.. |.+-||++.+
T Consensus 267 kvtaa~fH~--~t~~lvvgFssG~f~LyelP~f~lih~LS-----is~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqs 339 (893)
T KOG0291|consen 267 KVTAAAFHK--GTNLLVVGFSSGEFGLYELPDFNLIHSLS-----ISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQS 339 (893)
T ss_pred ceeeeeccC--CceEEEEEecCCeeEEEecCCceEEEEee-----cccceeeEEEecccCCEEEEcCCccceEEEEEeec
Confidence 455666532 12223478889999999999998876665 345689999999999999998754 7899999974
Q ss_pred CCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEE
Q 001548 811 LFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASG 890 (1056)
Q Consensus 811 ~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSg 890 (1056)
..+.....+|...++|++++|+ ++++|||+.||.|||||..+|-|+.+|.+|+..|+.+.|+. .++.++|.
T Consensus 340 -------EsYVlKQQgH~~~i~~l~YSpD-gq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~-~g~~llss 410 (893)
T KOG0291|consen 340 -------ESYVLKQQGHSDRITSLAYSPD-GQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTA-RGNVLLSS 410 (893)
T ss_pred -------cceeeeccccccceeeEEECCC-CcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEe-cCCEEEEe
Confidence 3455566789999999999999 99999999999999999999999999999999999999999 99999999
Q ss_pred eCCCcEEEEECCCCceeEEEeCCCC--eEEEEEccCCCcEEEEEeCCC-eEEEEEcCCCCcceEEecCCCCCeEEEEEc-
Q 001548 891 SDDCSVKLWNINEKNSLATIKNIAN--VCCVQFSAHSSHLLAFGSADY-RTYCYDLRNARAPWCVLAGHEKAVSYVKFL- 966 (1056)
Q Consensus 891 s~Dg~V~IWDlr~~~~~~~~~~~~~--V~sv~fsp~~~~~lasGs~Dg-~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs- 966 (1056)
|-||+|+.||+.......+|..+.+ ..||+..|.|. ++.+|+.|. .|.+|++.+++. +.++.||+++|++++|+
T Consensus 411 SLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGe-lV~AG~~d~F~IfvWS~qTGql-lDiLsGHEgPVs~l~f~~ 488 (893)
T KOG0291|consen 411 SLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGE-LVCAGAQDSFEIFVWSVQTGQL-LDILSGHEGPVSGLSFSP 488 (893)
T ss_pred ecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCC-EEEeeccceEEEEEEEeecCee-eehhcCCCCcceeeEEcc
Confidence 9999999999999999999987665 56999999997 777787775 599999999986 78999999999999999
Q ss_pred CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeC
Q 001548 967 DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRT 1046 (1056)
Q Consensus 967 ~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v 1046 (1056)
.+..|+|||+|.|||+||+-... ..+-++ .+...+++++ ++|+|+-|+++..|+.|-|||+
T Consensus 489 ~~~~LaS~SWDkTVRiW~if~s~-------~~vEtl-~i~sdvl~vs-----------frPdG~elaVaTldgqItf~d~ 549 (893)
T KOG0291|consen 489 DGSLLASGSWDKTVRIWDIFSSS-------GTVETL-EIRSDVLAVS-----------FRPDGKELAVATLDGQITFFDI 549 (893)
T ss_pred ccCeEEeccccceEEEEEeeccC-------ceeeeE-eeccceeEEE-----------EcCCCCeEEEEEecceEEEEEh
Confidence 67789999999999999986321 122222 3555667777 8999999999999999999999
Q ss_pred CCCeEE
Q 001548 1047 SWGCLL 1052 (1056)
Q Consensus 1047 ~~~~~~ 1052 (1056)
.-+.+.
T Consensus 550 ~~~~q~ 555 (893)
T KOG0291|consen 550 KEAVQV 555 (893)
T ss_pred hhceee
Confidence 877665
No 62
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.97 E-value=3.1e-29 Score=265.48 Aligned_cols=245 Identities=22% Similarity=0.311 Sum_probs=218.4
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001548 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1056)
Q Consensus 774 ~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V 853 (1056)
.+.+|.++|.|+++.|..++|+||+.|++|+|||+.+ ........+|...|..+++++- -.++++++.|+.|
T Consensus 146 Vi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlat-------g~LkltltGhi~~vr~vavS~r-HpYlFs~gedk~V 217 (460)
T KOG0285|consen 146 VISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLAT-------GQLKLTLTGHIETVRGVAVSKR-HPYLFSAGEDKQV 217 (460)
T ss_pred hhhhccceEEEEeeCCCceeEEecCCCceeEEEEccc-------CeEEEeecchhheeeeeeeccc-CceEEEecCCCee
Confidence 3569999999999999999999999999999999986 2344556689999999999987 6799999999999
Q ss_pred EEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEEE
Q 001548 854 KLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFG 932 (1056)
Q Consensus 854 ~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~lasG 932 (1056)
++||+...+.++.|.+|-+.|.|++.+| .-..|+||+.|.++++||+|+...+..+. |...|+.|.+.|..+ -+++|
T Consensus 218 KCwDLe~nkvIR~YhGHlS~V~~L~lhP-Tldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dp-qvit~ 295 (460)
T KOG0285|consen 218 KCWDLEYNKVIRHYHGHLSGVYCLDLHP-TLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDP-QVITG 295 (460)
T ss_pred EEEechhhhhHHHhccccceeEEEeccc-cceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCC-ceEEe
Confidence 9999999999999999999999999999 77899999999999999999999999997 778999999999887 68899
Q ss_pred eCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCC-EEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEE
Q 001548 933 SADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSG-TLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVG 1011 (1056)
Q Consensus 933 s~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs~~~-~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ 1011 (1056)
|.|++|++||++.++. ..++..|...|.+++.+|.. .++|+|.|+ |+-|++. .+..+..+.||..-+..
T Consensus 296 S~D~tvrlWDl~agkt-~~tlt~hkksvral~lhP~e~~fASas~dn-ik~w~~p--------~g~f~~nlsgh~~iint 365 (460)
T KOG0285|consen 296 SHDSTVRLWDLRAGKT-MITLTHHKKSVRALCLHPKENLFASASPDN-IKQWKLP--------EGEFLQNLSGHNAIINT 365 (460)
T ss_pred cCCceEEEeeeccCce-eEeeecccceeeEEecCCchhhhhccCCcc-ceeccCC--------ccchhhccccccceeee
Confidence 9999999999999987 77889999999999999655 477887765 8999997 45667779999999988
Q ss_pred EEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCCe
Q 001548 1012 ICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWGC 1050 (1056)
Q Consensus 1012 ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~~ 1050 (1056)
++.. .+..+++|+..+.+.+||...|.
T Consensus 366 l~~n------------sD~v~~~G~dng~~~fwdwksg~ 392 (460)
T KOG0285|consen 366 LSVN------------SDGVLVSGGDNGSIMFWDWKSGH 392 (460)
T ss_pred eeec------------cCceEEEcCCceEEEEEecCcCc
Confidence 8854 44566899999999999988775
No 63
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.97 E-value=1.9e-30 Score=293.84 Aligned_cols=205 Identities=17% Similarity=0.160 Sum_probs=157.5
Q ss_pred hhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Q 001548 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~g 341 (1056)
...++....||||+.+......+.. ...+|+|++|++|.+++...+ .+++..++.++.||+.|
T Consensus 43 E~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~ 105 (312)
T cd05585 43 ERTVLAQVNCPFIVPLKFSFQSPEK----------------LYLVLAFINGGELFHHLQREG-RFDLSRARFYTAELLCA 105 (312)
T ss_pred HHHHHHhCCCCcEeceeeEEecCCe----------------EEEEEcCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHH
Confidence 3456777899999976544321111 124899999999999997754 46777999999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 106 l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-------------------------------------- 147 (312)
T cd05585 106 LENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-------------------------------------- 147 (312)
T ss_pred HHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC--------------------------------------
Confidence 999999999999999999999999999999999886532000
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
......+||+.|+||
T Consensus 148 -----------------------------------------------------------------~~~~~~~gt~~y~aP 162 (312)
T cd05585 148 -----------------------------------------------------------------DKTNTFCGTPEYLAP 162 (312)
T ss_pred -----------------------------------------------------------------CccccccCCcccCCH
Confidence 000145789999999
Q ss_pred ccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCC---C
Q 001548 502 EELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP---T 575 (1056)
Q Consensus 502 E~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rp---t 575 (1056)
|++.+..++.++|||||||++|||++| |............+.... ......++.+.+|+.+||.+||.+|| +
T Consensus 163 E~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dp~~R~~~~~ 240 (312)
T cd05585 163 ELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPL--RFPDGFDRDAKDLLIGLLSRDPTRRLGYNG 240 (312)
T ss_pred HHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC--CCCCcCCHHHHHHHHHHcCCCHHHcCCCCC
Confidence 999999999999999999999999987 333222222222232221 12234678899999999999999997 5
Q ss_pred HHHHhhhhhhhhh
Q 001548 576 TREILQSEVTNEF 588 (1056)
Q Consensus 576 ~~eil~~~~~~~~ 588 (1056)
+.++|.||||...
T Consensus 241 ~~e~l~hp~~~~~ 253 (312)
T cd05585 241 AQEIKNHPFFSQL 253 (312)
T ss_pred HHHHHcCCCcCCC
Confidence 7999999999864
No 64
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.97 E-value=1.2e-30 Score=297.83 Aligned_cols=250 Identities=15% Similarity=0.129 Sum_probs=176.9
Q ss_pred CchhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccC-Cchh-HHHHhhhhhhccCCCCCCCcccceeeecC
Q 001548 210 GFSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDA-ALKAAGAMMVASNASPKPVGVGTAVVSNG 285 (1056)
Q Consensus 210 ~~~~~~~k~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (1056)
.+.+|.+.+.++ ++|.||++...+. ......+....... .... ..-.....++....||||+.+......+.
T Consensus 16 ~~~~y~~~~~lg~G~~g~V~~~~~~~~----~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 91 (329)
T PTZ00263 16 KLSDFEMGETLGTGSFGRVRIAKHKGT----GEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDEN 91 (329)
T ss_pred CchheEEEEEEEecCCeEEEEEEECCC----CCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCC
Confidence 445677766665 7799999976311 00011111111000 0011 11112245677789999998765543222
Q ss_pred CCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccC
Q 001548 286 SLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS 365 (1056)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~ 365 (1056)
.. ..+|+|+.|++|.+++...+ .+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 92 ~~----------------~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~ 154 (329)
T PTZ00263 92 RV----------------YFLLEFVVGGELFTHLRKAG-RFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNK 154 (329)
T ss_pred EE----------------EEEEcCCCCChHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCC
Confidence 11 24899999999999998765 45666899999999999999999999999999999999999
Q ss_pred CcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCccccccccc
Q 001548 366 NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (1056)
Q Consensus 366 ~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1056)
+.+||+|||+++.....
T Consensus 155 ~~~kl~Dfg~~~~~~~~--------------------------------------------------------------- 171 (329)
T PTZ00263 155 GHVKVTDFGFAKKVPDR--------------------------------------------------------------- 171 (329)
T ss_pred CCEEEeeccCceEcCCC---------------------------------------------------------------
Confidence 99999999988653310
Q ss_pred ccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHH
Q 001548 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL 525 (1056)
Q Consensus 446 i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eL 525 (1056)
.....||+.|+|||++.+..++.++|||||||+||||
T Consensus 172 -------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 208 (329)
T PTZ00263 172 -------------------------------------------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEF 208 (329)
T ss_pred -------------------------------------------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHH
Confidence 0034688999999999999999999999999999999
Q ss_pred hCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCC-----HHHHhhhhhhhhh
Q 001548 526 FGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT-----TREILQSEVTNEF 588 (1056)
Q Consensus 526 lt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt-----~~eil~~~~~~~~ 588 (1056)
++| |................ + +.....++.+.+||.+||++||.+||+ +.+++.||||...
T Consensus 209 ltg~~pf~~~~~~~~~~~i~~~~-~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 209 IAGYPPFFDDTPFRIYEKILAGR-L-KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA 277 (329)
T ss_pred HcCCCCCCCCCHHHHHHHHhcCC-c-CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence 987 33333322222222222 1 122235788999999999999999997 7999999999763
No 65
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=2e-30 Score=292.93 Aligned_cols=206 Identities=21% Similarity=0.206 Sum_probs=174.6
Q ss_pred hhhhccCCCCCCCcccceeeecCC-CCCCcCCCCCcccccCCCcccccCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGS-LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA-RGHKGKRIECLYIFRQIVA 340 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~-~~~~~~~~~~~~i~~QIl~ 340 (1056)
+.++....|||||...+..+-+.- ++ ++|+||+||+|.+.|+. ++..+++..+..+|.||+.
T Consensus 54 ~~lis~~~hP~iv~y~ds~~~~~~~l~----------------Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~ 117 (426)
T KOG0589|consen 54 MDLLSKLLHPNIVEYKDSFEEDGQLLC----------------IVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILL 117 (426)
T ss_pred HHHHHhccCCCeeeeccchhcCCceEE----------------EEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHH
Confidence 456777899999986666554444 33 49999999999999855 4477888899999999999
Q ss_pred HHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccc
Q 001548 341 LVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (1056)
Q Consensus 341 gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 420 (1056)
||.|||+++|+|||||+.||+++.++.||+.|||+|+.+..+.
T Consensus 118 av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~------------------------------------- 160 (426)
T KOG0589|consen 118 AVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED------------------------------------- 160 (426)
T ss_pred HHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch-------------------------------------
Confidence 9999999999999999999999999999999999999876211
Q ss_pred ccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccC
Q 001548 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (1056)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 500 (1056)
....+.+||+.||+
T Consensus 161 ------------------------------------------------------------------~~a~tvvGTp~Ymc 174 (426)
T KOG0589|consen 161 ------------------------------------------------------------------SLASTVVGTPYYMC 174 (426)
T ss_pred ------------------------------------------------------------------hhhheecCCCcccC
Confidence 00116899999999
Q ss_pred cccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHH
Q 001548 501 PEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTR 577 (1056)
Q Consensus 501 PE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~ 577 (1056)
||++.+.+|+.++|||||||++|||++- |...+.....+++.+.. ..|.....+.+++.++..||..+|..||++.
T Consensus 175 PEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~-~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~ 253 (426)
T KOG0589|consen 175 PEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL-YSPLPSMYSSELRSLVKSMLRKNPEHRPSAL 253 (426)
T ss_pred HHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhcc-CCCCCccccHHHHHHHHHHhhcCCccCCCHH
Confidence 9999999999999999999999999973 77776666666665554 5666677799999999999999999999999
Q ss_pred HHhhhhhhhhh
Q 001548 578 EILQSEVTNEF 588 (1056)
Q Consensus 578 eil~~~~~~~~ 588 (1056)
++|.+|.+...
T Consensus 254 ~LL~~P~l~~~ 264 (426)
T KOG0589|consen 254 ELLRRPHLLRY 264 (426)
T ss_pred HHhhChhhhhH
Confidence 99999887654
No 66
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.97 E-value=2.6e-28 Score=289.49 Aligned_cols=285 Identities=19% Similarity=0.289 Sum_probs=235.0
Q ss_pred cccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 001548 730 ENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFN 809 (1056)
Q Consensus 730 ~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~ 809 (1056)
...+.++.+ ........+++.|+++++|+....+. .+++ .+.+|...|.+++|+|++.++++|+.|++|+|||+.
T Consensus 159 ~~sv~~~~f--s~~g~~l~~~~~~~~i~~~~~~~~~~-~~~~--~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~ 233 (456)
T KOG0266|consen 159 CPSVTCVDF--SPDGRALAAASSDGLIRIWKLEGIKS-NLLR--ELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLK 233 (456)
T ss_pred cCceEEEEE--cCCCCeEEEccCCCcEEEeecccccc-hhhc--cccccccceeeeEECCCCcEEEEecCCceEEEeecc
Confidence 445556555 12223334667899999999855542 1222 346999999999999999999999999999999994
Q ss_pred CCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEE
Q 001548 810 ALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLAS 889 (1056)
Q Consensus 810 t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laS 889 (1056)
. ......+..+|...|++++|+|. ++++++|+.|++|+|||+++++++..+.+|.+.|++++|++ ++++|++
T Consensus 234 ~------~~~~~~~l~gH~~~v~~~~f~p~-g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~-d~~~l~s 305 (456)
T KOG0266|consen 234 D------DGRNLKTLKGHSTYVTSVAFSPD-GNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSP-DGNLLVS 305 (456)
T ss_pred C------CCeEEEEecCCCCceEEEEecCC-CCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECC-CCCEEEE
Confidence 2 23445567799999999999999 69999999999999999999999999999999999999999 9999999
Q ss_pred EeCCCcEEEEECCCCc--eeEEEe-CC-C-CeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEE-
Q 001548 890 GSDDCSVKLWNINEKN--SLATIK-NI-A-NVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYV- 963 (1056)
Q Consensus 890 gs~Dg~V~IWDlr~~~--~~~~~~-~~-~-~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l- 963 (1056)
++.|+.|+|||+.++. ++..+. +. . .+++++|+|++. ++++++.|+.+++||++.... ...+.+|...+.++
T Consensus 306 ~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~-~ll~~~~d~~~~~w~l~~~~~-~~~~~~~~~~~~~~~ 383 (456)
T KOG0266|consen 306 ASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGK-YLLSASLDRTLKLWDLRSGKS-VGTYTGHSNLVRCIF 383 (456)
T ss_pred cCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCc-EEEEecCCCeEEEEEccCCcc-eeeecccCCcceeEe
Confidence 9999999999999999 555554 22 2 689999999997 888999999999999998876 56778888764333
Q ss_pred --EEc-CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCC-CCcEEEEEecCCcceeeEEeeCCCCEEEEEE--c
Q 001548 964 --KFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGH-TNEKVGICRLEHNLFPFTIFNLSDCWLLLVC--F 1037 (1056)
Q Consensus 964 --~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH-~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s--~ 1037 (1056)
.++ .+..+++|+.|+.|.+||+. ++..+..+.+| ...+..++ +++....+++++ .
T Consensus 384 ~~~~~~~~~~i~sg~~d~~v~~~~~~--------s~~~~~~l~~h~~~~~~~~~-----------~~~~~~~~~s~s~~~ 444 (456)
T KOG0266|consen 384 SPTLSTGGKLIYSGSEDGSVYVWDSS--------SGGILQRLEGHSKAAVSDLS-----------SHPTENLIASSSFEG 444 (456)
T ss_pred cccccCCCCeEEEEeCCceEEEEeCC--------ccchhhhhcCCCCCceeccc-----------cCCCcCeeeecCcCC
Confidence 223 66789999999999999998 45678889999 77776666 788888888888 7
Q ss_pred CCcEEEEeCCC
Q 001548 1038 DFTTLSFRTSW 1048 (1056)
Q Consensus 1038 D~~v~iW~v~~ 1048 (1056)
|+.+++|..+.
T Consensus 445 d~~~~~w~~~~ 455 (456)
T KOG0266|consen 445 DGLIRLWKYDF 455 (456)
T ss_pred CceEEEecCCC
Confidence 99999998764
No 67
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=4.8e-29 Score=265.45 Aligned_cols=251 Identities=21% Similarity=0.278 Sum_probs=226.6
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001548 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1056)
Q Consensus 774 ~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V 853 (1056)
.+.+|-..|+.+.|+|+-..+|+++.|.+|++||+.+. .......+|...|.+|+|+.. +.++|+|+.|-.+
T Consensus 103 ~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg-------~~e~~LrGHt~sv~di~~~a~-Gk~l~tcSsDl~~ 174 (406)
T KOG0295|consen 103 KLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETG-------ELERSLRGHTDSVFDISFDAS-GKYLATCSSDLSA 174 (406)
T ss_pred hhhccccceeeeeeccCceEEEEecCCceEEEEEccch-------hhhhhhhccccceeEEEEecC-ccEEEecCCccch
Confidence 35688999999999999999999999999999999862 224455689999999999998 8999999999999
Q ss_pred EEEEcCC-CceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEE
Q 001548 854 KLWDACT-GQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAF 931 (1056)
Q Consensus 854 ~lWD~~t-~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~las 931 (1056)
++||..+ -++++...+|+..|.+|.|-| .+.+++|++.|.+|++|++.++.++.++. |..-|..++.+.||. ++|+
T Consensus 175 ~LWd~~~~~~c~ks~~gh~h~vS~V~f~P-~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGt-i~As 252 (406)
T KOG0295|consen 175 KLWDFDTFFRCIKSLIGHEHGVSSVFFLP-LGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGT-IIAS 252 (406)
T ss_pred hheeHHHHHHHHHHhcCcccceeeEEEEe-cCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCee-EEEe
Confidence 9999987 568888999999999999999 78999999999999999999999999997 456799999999996 9999
Q ss_pred EeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcC-----------C-----CEEEEEECCCeEEEEECCCCCCCCCCC
Q 001548 932 GSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLD-----------S-----GTLVTASTDNKLKLWDLKRTSHTGPST 995 (1056)
Q Consensus 932 Gs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs~-----------~-----~~L~SgS~Dg~IkiWdl~~~~~~~~~~ 995 (1056)
|+.|.++++|-+.+... ...+.+|+.+|-+++|-+ + .+++++|.|++||+||+. +
T Consensus 253 ~s~dqtl~vW~~~t~~~-k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~--------t 323 (406)
T KOG0295|consen 253 CSNDQTLRVWVVATKQC-KAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVS--------T 323 (406)
T ss_pred cCCCceEEEEEeccchh-hhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEecc--------C
Confidence 99999999999988754 567899999999999942 1 379999999999999998 7
Q ss_pred CceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCCeEEEE
Q 001548 996 NACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWGCLLLM 1054 (1056)
Q Consensus 996 ~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~~~~~~ 1054 (1056)
+.|+.++.||.++|.+++ ++|.|+|++++..|+++++||+..+.+..+
T Consensus 324 g~cL~tL~ghdnwVr~~a-----------f~p~Gkyi~ScaDDktlrvwdl~~~~cmk~ 371 (406)
T KOG0295|consen 324 GMCLFTLVGHDNWVRGVA-----------FSPGGKYILSCADDKTLRVWDLKNLQCMKT 371 (406)
T ss_pred CeEEEEEecccceeeeeE-----------EcCCCeEEEEEecCCcEEEEEeccceeeec
Confidence 899999999999999999 899999999999999999999999887654
No 68
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=5.2e-31 Score=289.60 Aligned_cols=180 Identities=20% Similarity=0.239 Sum_probs=147.1
Q ss_pred CCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhccccc
Q 001548 303 GLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLES 382 (1056)
Q Consensus 303 ~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~ 382 (1056)
-+..|+||.||++.++|+..+. +++.++..++++++.||.|||.++.+|||||+.|||+..+|.+|++|||++-.+...
T Consensus 86 LwiiMey~~gGsv~~lL~~~~~-~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~ 164 (467)
T KOG0201|consen 86 LWIIMEYCGGGSVLDLLKSGNI-LDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNT 164 (467)
T ss_pred HHHHHHHhcCcchhhhhccCCC-CccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeech
Confidence 4569999999999999977654 466688999999999999999999999999999999999999999999988665410
Q ss_pred ccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCccccc
Q 001548 383 ASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHH 462 (1056)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~ 462 (1056)
.
T Consensus 165 ~------------------------------------------------------------------------------- 165 (467)
T KOG0201|consen 165 V------------------------------------------------------------------------------- 165 (467)
T ss_pred h-------------------------------------------------------------------------------
Confidence 0
Q ss_pred ccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCCCCcHHHHHHHHHhh
Q 001548 463 TNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDL 542 (1056)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~f~~~~~~~~~~~~~ 542 (1056)
.+. .+.+|||+|||||++.+..|+.++||||||++.+||++|-++...... |+.+
T Consensus 166 -----------------------~rr-~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP-mrvl 220 (467)
T KOG0201|consen 166 -----------------------KRR-KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP-MRVL 220 (467)
T ss_pred -----------------------hcc-ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc-ceEE
Confidence 000 178999999999999998999999999999999999998544432222 2221
Q ss_pred --ccCCCCCCC-CCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhh
Q 001548 543 --RDRILPPSF-LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1056)
Q Consensus 543 --~~~~lp~~~-~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~ 587 (1056)
.....||.+ ...++.+++|+..||.+||+.||+|.++|+|+|+..
T Consensus 221 flIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~ 268 (467)
T KOG0201|consen 221 FLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR 268 (467)
T ss_pred EeccCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence 122233333 366788999999999999999999999999999977
No 69
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.96 E-value=9.8e-30 Score=290.69 Aligned_cols=217 Identities=17% Similarity=0.257 Sum_probs=157.7
Q ss_pred hhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Q 001548 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~g 341 (1056)
...++...+||||+.+........... ... ...+|++|+ ++|.+++...+ .+++..++.++.||+.|
T Consensus 49 E~~~l~~l~hpniv~~~~~~~~~~~~~------~~~-----~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~i~~qi~~a 115 (338)
T cd07859 49 EIKLLRLLRHPDIVEIKHIMLPPSRRE------FKD-----IYVVFELME-SDLHQVIKAND-DLTPEHHQFFLYQLLRA 115 (338)
T ss_pred HHHHHHhCCCCCEeeecceEeccCCCC------Cce-----EEEEEecCC-CCHHHHHHhcc-cCCHHHHHHHHHHHHHH
Confidence 355778889999998766543222111 001 124788885 68999997654 46777999999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 116 L~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~------------------------------------- 158 (338)
T cd07859 116 LKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP------------------------------------- 158 (338)
T ss_pred HHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccC-------------------------------------
Confidence 9999999999999999999999999999999999876431000
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
........+||++|+||
T Consensus 159 ---------------------------------------------------------------~~~~~~~~~~t~~y~aP 175 (338)
T cd07859 159 ---------------------------------------------------------------TAIFWTDYVATRWYRAP 175 (338)
T ss_pred ---------------------------------------------------------------ccccccCCCCCCCcCCH
Confidence 00001246799999999
Q ss_pred ccccC--CCCCccchhHHHHHHHHHHhCC---CCcHHHHH--HH------------------------HHhhccC---CC
Q 001548 502 EELSG--GVCTTSSNIYSLGVLFFELFGR---FDSERALA--AA------------------------MSDLRDR---IL 547 (1056)
Q Consensus 502 E~l~~--~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~--~~------------------------~~~~~~~---~l 547 (1056)
|++.+ ..++.++|||||||++|||++| |....... .. ...+... .+
T Consensus 176 E~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 255 (338)
T cd07859 176 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPF 255 (338)
T ss_pred HHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCch
Confidence 99876 6789999999999999999986 33221111 00 0111111 11
Q ss_pred CCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhhh
Q 001548 548 PPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (1056)
Q Consensus 548 p~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~~ 591 (1056)
...++..++.+.+|+.+||++||.+|||+.|+|+||||......
T Consensus 256 ~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~~ 299 (338)
T cd07859 256 SQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKV 299 (338)
T ss_pred HHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCcc
Confidence 12334567888999999999999999999999999999876543
No 70
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.3e-30 Score=300.35 Aligned_cols=180 Identities=19% Similarity=0.227 Sum_probs=154.4
Q ss_pred CcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccc
Q 001548 304 LRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESA 383 (1056)
Q Consensus 304 ~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~ 383 (1056)
..+|||+.||++..++.. ..+++..++.|+..|+.||.|||++|||+||||.+||||+..|++||+|||+|++....
T Consensus 445 ~fvmey~~Ggdm~~~~~~--~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~- 521 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHIHT--DVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ- 521 (694)
T ss_pred EEEEEecCCCcEEEEEec--ccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCC-
Confidence 348999999996655432 36888899999999999999999999999999999999999999999999999874310
Q ss_pred cCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccc
Q 001548 384 SLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHT 463 (1056)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~ 463 (1056)
T Consensus 522 -------------------------------------------------------------------------------- 521 (694)
T KOG0694|consen 522 -------------------------------------------------------------------------------- 521 (694)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHH
Q 001548 464 NAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMS 540 (1056)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~ 540 (1056)
| ..-++.||||.|||||++.+..|+.++|+|||||+|||||.| |+++++......
T Consensus 522 ----g------------------~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~Fds 579 (694)
T KOG0694|consen 522 ----G------------------DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDS 579 (694)
T ss_pred ----C------------------CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence 0 001278999999999999999999999999999999999964 888877777777
Q ss_pred hhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCH-----HHHhhhhhhhhhhh
Q 001548 541 DLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT-----REILQSEVTNEFQE 590 (1056)
Q Consensus 541 ~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~-----~eil~~~~~~~~~~ 590 (1056)
++....+-|.+. +.+..+++.+||.++|.+|..+ .+|.+||||.....
T Consensus 580 I~~d~~~yP~~l--s~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w 632 (694)
T KOG0694|consen 580 IVNDEVRYPRFL--SKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDW 632 (694)
T ss_pred HhcCCCCCCCcc--cHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCH
Confidence 787777777665 7788899999999999999765 78999999998653
No 71
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.96 E-value=2.8e-30 Score=251.66 Aligned_cols=241 Identities=17% Similarity=0.191 Sum_probs=186.7
Q ss_pred cccceeeeCCCCCccccccccccccccccccCCchhHH----HHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCC
Q 001548 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAAL----KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1056)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1056)
+-.|.|+|+.+ ++....+|.++.+.+.|..- ....+-+++..+|.||+++.++.+++..+-+
T Consensus 13 gtygtvfkarn-------~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltl------- 78 (292)
T KOG0662|consen 13 GTYGTVFKARN-------RETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTL------- 78 (292)
T ss_pred CcceeeEeccc-------CCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEE-------
Confidence 34599999998 55555566665554433110 1122347888999999999998776655541
Q ss_pred cccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchh
Q 001548 297 ASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1056)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla 376 (1056)
+.+||. .+|..+..+-...++...++.++.|++.||.|||+++|.||||||.|+||..+|.+|++|||++
T Consensus 79 ---------vfe~cd-qdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfgla 148 (292)
T KOG0662|consen 79 ---------VFEFCD-QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLA 148 (292)
T ss_pred ---------eHHHhh-HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchh
Confidence 445554 5899999988888999999999999999999999999999999999999999999999999999
Q ss_pred hcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCC
Q 001548 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1056)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~ 456 (1056)
+.++-
T Consensus 149 rafgi--------------------------------------------------------------------------- 153 (292)
T KOG0662|consen 149 RAFGI--------------------------------------------------------------------------- 153 (292)
T ss_pred hhcCC---------------------------------------------------------------------------
Confidence 88661
Q ss_pred CcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCC-CCccchhHHHHHHHHHHhC-C---CCc
Q 001548 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV-CTTSSNIYSLGVLFFELFG-R---FDS 531 (1056)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~-~t~~sDIwSLGvlL~eLlt-~---f~~ 531 (1056)
|.+-++..+-|.||++|.++.|.. |+++.|+||.||++.||.. | |++
T Consensus 154 ----------------------------pvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg 205 (292)
T KOG0662|consen 154 ----------------------------PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG 205 (292)
T ss_pred ----------------------------ceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCC
Confidence 122233567899999999999954 8999999999999999984 2 888
Q ss_pred HHHHHHHHHhhccC------CCC-----------CC----------CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhh
Q 001548 532 ERALAAAMSDLRDR------ILP-----------PS----------FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEV 584 (1056)
Q Consensus 532 ~~~~~~~~~~~~~~------~lp-----------~~----------~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~ 584 (1056)
.+...+.+++.+.- .+| |. .+..+..-++|++++|.-+|.+|+++++.|+|||
T Consensus 206 ~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpy 285 (292)
T KOG0662|consen 206 NDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPY 285 (292)
T ss_pred CcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcc
Confidence 77777776665432 111 11 1223345689999999999999999999999999
Q ss_pred hhhh
Q 001548 585 TNEF 588 (1056)
Q Consensus 585 ~~~~ 588 (1056)
|...
T Consensus 286 f~d~ 289 (292)
T KOG0662|consen 286 FSDF 289 (292)
T ss_pred cccc
Confidence 9875
No 72
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.96 E-value=5.8e-30 Score=288.43 Aligned_cols=207 Identities=16% Similarity=0.226 Sum_probs=151.0
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...++...||||+.+......+.. ...+|+|+. ++|.+++......+++..++.++.||+.||
T Consensus 54 ~~~l~~l~h~niv~~~~~~~~~~~----------------~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al 116 (303)
T cd07869 54 ASLLKGLKHANIVLLHDIIHTKET----------------LTLVFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGL 116 (303)
T ss_pred HHHHhhCCCCCcCeEEEEEecCCe----------------EEEEEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 456778899999976554332111 114788885 688888877656677779999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 117 ~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---------------------------------------- 156 (303)
T cd07869 117 SYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVP---------------------------------------- 156 (303)
T ss_pred HHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCC----------------------------------------
Confidence 9999999999999999999999999999999988653210
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
........||++|+|||
T Consensus 157 ---------------------------------------------------------------~~~~~~~~~~~~y~aPE 173 (303)
T cd07869 157 ---------------------------------------------------------------SHTYSNEVVTLWYRPPD 173 (303)
T ss_pred ---------------------------------------------------------------CccCCCCcccCCCCChH
Confidence 00011456789999999
Q ss_pred cccC-CCCCccchhHHHHHHHHHHhCC---CCcHHHHH----HHHHhhccC---CC----------CCCC----------
Q 001548 503 ELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERALA----AAMSDLRDR---IL----------PPSF---------- 551 (1056)
Q Consensus 503 ~l~~-~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~----~~~~~~~~~---~l----------p~~~---------- 551 (1056)
++.+ ..++.++|||||||+||||++| |.+..... .....+... .+ +..+
T Consensus 174 ~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (303)
T cd07869 174 VLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQ 253 (303)
T ss_pred HHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHH
Confidence 9876 4589999999999999999987 43321111 111111000 00 0000
Q ss_pred ----CCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001548 552 ----LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1056)
Q Consensus 552 ----~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~ 589 (1056)
...++.+.+|+.+||++||.+|||+.|+|+||||...+
T Consensus 254 ~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~ 295 (303)
T cd07869 254 AWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP 295 (303)
T ss_pred HhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence 01345678999999999999999999999999998753
No 73
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.96 E-value=5.2e-30 Score=291.78 Aligned_cols=203 Identities=16% Similarity=0.201 Sum_probs=158.2
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+......+... ..+|||++|++|.+++...+ .+++..++.++.||+.||
T Consensus 46 ~~~l~~l~hp~i~~~~~~~~~~~~~----------------~lv~E~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL 108 (323)
T cd05595 46 SRVLQNTRHPFLTALKYAFQTHDRL----------------CFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSAL 108 (323)
T ss_pred HHHHHhCCCCCCcceeeEEecCCEE----------------EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHH
Confidence 4577888999999876554432221 14899999999999987654 467779999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 109 ~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~--------------------------------------- 149 (323)
T cd05595 109 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--------------------------------------- 149 (323)
T ss_pred HHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCC---------------------------------------
Confidence 99999999999999999999999999999999886532100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......||+.|+|||
T Consensus 150 ----------------------------------------------------------------~~~~~~~gt~~y~aPE 165 (323)
T cd05595 150 ----------------------------------------------------------------ATMKTFCGTPEYLAPE 165 (323)
T ss_pred ----------------------------------------------------------------CccccccCCcCcCCcc
Confidence 0011356899999999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccC-CCCCCCCCCChhHHHHHHhccccCCCCCC----
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDR-ILPPSFLSENPKEAGFCLWQLHPEPLSRP---- 574 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~-~lp~~~~~~~~~~~~li~~lL~~dP~~Rp---- 574 (1056)
++.+..++.++|||||||+||||+++ |................ .+| ...++.+.+||.+||.+||.+||
T Consensus 166 ~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~ 242 (323)
T cd05595 166 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTLSPEAKSLLAGLLKKDPKQRLGGGP 242 (323)
T ss_pred cccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC---CCCCHHHHHHHHHHccCCHHHhCCCCC
Confidence 99999999999999999999999986 33322222222222221 222 34578899999999999999998
Q ss_pred -CHHHHhhhhhhhhh
Q 001548 575 -TTREILQSEVTNEF 588 (1056)
Q Consensus 575 -t~~eil~~~~~~~~ 588 (1056)
++.++++|+||...
T Consensus 243 ~~~~~~l~h~~~~~~ 257 (323)
T cd05595 243 SDAKEVMEHRFFLSI 257 (323)
T ss_pred CCHHHHHcCCCcCCC
Confidence 89999999999874
No 74
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.96 E-value=3e-30 Score=270.88 Aligned_cols=250 Identities=20% Similarity=0.232 Sum_probs=178.9
Q ss_pred cceeeeCCCCCccccccccccccccccc----cCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcc
Q 001548 223 KGIVCRGPPLNAFKERRGMIDTKAFVTT----TMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1056)
Q Consensus 223 ~Gvv~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1056)
.|.|||....|.-..+....+.+++..+ .+.+-+-|+. ++++..+|||++++..+...+ + ..+.
T Consensus 37 YG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREi---aL~REl~h~nvi~Lv~Vfl~~---d----~~v~-- 104 (438)
T KOG0666|consen 37 YGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREI---ALLRELKHPNVISLVKVFLSH---D----KKVW-- 104 (438)
T ss_pred cceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHH---HHHHHhcCCcchhHHHHHhcc---C----ceEE--
Confidence 4999999766555543333344444333 5666655554 499999999999876664431 1 0110
Q ss_pred cccCCCcccccCCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccC----CcEEE
Q 001548 299 CWIGGLRQGSSDHGVNLREWLNA----RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS----NQVKY 370 (1056)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~----~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~----~~vkl 370 (1056)
+...|..-+|.+.|+- ..+.++...++.|+.||+.||.|||++-|+||||||.|||+..+ |.|||
T Consensus 105 -------l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 105 -------LLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred -------EEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEe
Confidence 2335677799998843 33567888999999999999999999999999999999999877 89999
Q ss_pred eCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccC
Q 001548 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1056)
Q Consensus 371 ~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g 450 (1056)
+|||++|.+..+-+
T Consensus 178 aDlGlaR~~~~plk------------------------------------------------------------------ 191 (438)
T KOG0666|consen 178 ADLGLARLFNNPLK------------------------------------------------------------------ 191 (438)
T ss_pred ecccHHHHhhcccc------------------------------------------------------------------
Confidence 99999998763321
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccC-CCCCccchhHHHHHHHHHHhCC-
Q 001548 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR- 528 (1056)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~t~~sDIwSLGvlL~eLlt~- 528 (1056)
|.-+....+-|.||+|||++.| ..||.+.|||++|||+.|||+-
T Consensus 192 ----------------------------------pl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~ 237 (438)
T KOG0666|consen 192 ----------------------------------PLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLE 237 (438)
T ss_pred ----------------------------------ccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccC
Confidence 1112236788999999999999 4589999999999999999973
Q ss_pred --CCcHH------------HHHHHHHhhccC---CCC-----CC------------------------CCCCChhHHHHH
Q 001548 529 --FDSER------------ALAAAMSDLRDR---ILP-----PS------------------------FLSENPKEAGFC 562 (1056)
Q Consensus 529 --f~~~~------------~~~~~~~~~~~~---~lp-----~~------------------------~~~~~~~~~~li 562 (1056)
|.+.+ .....+..+-.+ .+| |. ....++...+|+
T Consensus 238 PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL 317 (438)
T KOG0666|consen 238 PLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLL 317 (438)
T ss_pred ccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHH
Confidence 43331 111222222111 111 00 122455578999
Q ss_pred HhccccCCCCCCCHHHHhhhhhhhhhhhh
Q 001548 563 LWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (1056)
Q Consensus 563 ~~lL~~dP~~Rpt~~eil~~~~~~~~~~~ 591 (1056)
.+||..||.+|+|+.++|+|+||.+.+.+
T Consensus 318 ~klL~yDP~kRIta~qAleh~yF~~d~lp 346 (438)
T KOG0666|consen 318 QKLLTYDPIKRITAEQALEHPYFTEDPLP 346 (438)
T ss_pred HHHhccCchhhccHHHHhcccccccCCCC
Confidence 99999999999999999999999987544
No 75
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=6.6e-30 Score=298.20 Aligned_cols=210 Identities=15% Similarity=0.126 Sum_probs=153.6
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+......+.... .+++++ +++|.+++.... .++..+++.|++||+.||
T Consensus 134 ~~il~~l~HpnIv~~~~~~~~~~~~~----------------lv~e~~-~~~L~~~l~~~~-~l~~~~~~~i~~qi~~aL 195 (391)
T PHA03212 134 AHILRAINHPSIIQLKGTFTYNKFTC----------------LILPRY-KTDLYCYLAAKR-NIAICDILAIERSVLRAI 195 (391)
T ss_pred HHHHHhCCCCCCCCEeEEEEECCeeE----------------EEEecC-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHH
Confidence 45788889999998766544322211 256666 468999987654 467778999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 196 ~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~--------------------------------------- 236 (391)
T PHA03212 196 QYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN--------------------------------------- 236 (391)
T ss_pred HHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccccc---------------------------------------
Confidence 99999999999999999999999999999999986432100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......+||+.|+|||
T Consensus 237 ---------------------------------------------------------------~~~~~~~~gt~~y~aPE 253 (391)
T PHA03212 237 ---------------------------------------------------------------ANKYYGWAGTIATNAPE 253 (391)
T ss_pred ---------------------------------------------------------------ccccccccCccCCCChh
Confidence 00011457999999999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCCCCcH-------------HHHHHHHHhh-----------------------ccC-
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGRFDSE-------------RALAAAMSDL-----------------------RDR- 545 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~f~~~-------------~~~~~~~~~~-----------------------~~~- 545 (1056)
++.+..++.++|||||||+||||+++..+. .........+ ...
T Consensus 254 ~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (391)
T PHA03212 254 LLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSS 333 (391)
T ss_pred hhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccC
Confidence 999999999999999999999999862110 1111111000 000
Q ss_pred CCC---C---CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhhhc
Q 001548 546 ILP---P---SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (1056)
Q Consensus 546 ~lp---~---~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~~~ 592 (1056)
..| + .....+..+.+||.+||++||.+|||+.|+|+||||...+.+.
T Consensus 334 ~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~~~ 386 (391)
T PHA03212 334 RKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPDPY 386 (391)
T ss_pred CCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCCCC
Confidence 000 0 0112345678999999999999999999999999998865543
No 76
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.96 E-value=1.8e-29 Score=299.13 Aligned_cols=217 Identities=15% Similarity=0.152 Sum_probs=153.1
Q ss_pred hhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHh---cCCCCCHHHHHHHHHHH
Q 001548 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQI 338 (1056)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~QI 338 (1056)
...++....||||+.+........... ...... -..+|+|++| +|.+++.. .+..++...++.++.||
T Consensus 109 Ei~il~~l~h~niv~l~~~~~~~~~~~---~~~~~~-----l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi 179 (440)
T PTZ00036 109 ELLIMKNLNHINIIFLKDYYYTECFKK---NEKNIF-----LNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQL 179 (440)
T ss_pred HHHHHHhcCCCCCcceeeeEeeccccc---CCCceE-----EEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHH
Confidence 345788889999998655422111000 000000 1137888875 78777743 34567888999999999
Q ss_pred HHHHHHhhhcCcccccCCCCCEEEccCC-cEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccc
Q 001548 339 VALVDYHHTQGVTFLDLKPSSFKLLQSN-QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (1056)
Q Consensus 339 l~gL~ylHs~gIvHrDLKP~NILl~~~~-~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 417 (1056)
+.||.|||++||+||||||+||||+.++ .+||+|||+++.+...
T Consensus 180 ~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~----------------------------------- 224 (440)
T PTZ00036 180 CRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAG----------------------------------- 224 (440)
T ss_pred HHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchhccCC-----------------------------------
Confidence 9999999999999999999999998665 6999999998764310
Q ss_pred cccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCC
Q 001548 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (1056)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 497 (1056)
......+||++
T Consensus 225 ---------------------------------------------------------------------~~~~~~~~t~~ 235 (440)
T PTZ00036 225 ---------------------------------------------------------------------QRSVSYICSRF 235 (440)
T ss_pred ---------------------------------------------------------------------CCcccCCCCcC
Confidence 00014568999
Q ss_pred ccCcccccCC-CCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhc---cC---------------CCCC------
Q 001548 498 YASPEELSGG-VCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLR---DR---------------ILPP------ 549 (1056)
Q Consensus 498 Y~APE~l~~~-~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~---~~---------------~lp~------ 549 (1056)
|+|||++.+. .|+.++|||||||+||||++| |.+..........+. .. .+|.
T Consensus 236 y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l 315 (440)
T PTZ00036 236 YRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDL 315 (440)
T ss_pred ccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhH
Confidence 9999998774 689999999999999999987 433322222211111 00 0111
Q ss_pred --CC-CCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhhh
Q 001548 550 --SF-LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (1056)
Q Consensus 550 --~~-~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~~ 591 (1056)
.+ ...++++.+||.+||.+||.+|||+.|+|+||||......
T Consensus 316 ~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~~ 360 (440)
T PTZ00036 316 KKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRDP 360 (440)
T ss_pred HHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhcc
Confidence 01 1345778899999999999999999999999999886553
No 77
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.96 E-value=1.6e-29 Score=302.89 Aligned_cols=253 Identities=20% Similarity=0.169 Sum_probs=180.5
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCc
Q 001548 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1056)
Q Consensus 214 ~~~k~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1056)
|.+...+ +|+|+||++....... .....+ +.......+.........++....||||+.+......+....
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~---~~vv~K-~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~--- 141 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPK---EKVVAK-FVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLL--- 141 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCC---eEEEEE-EcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEE---
Confidence 5555555 4789999986531100 011111 111111111122223456788889999998776644332222
Q ss_pred CCCCCcccccCCCcccccCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcE
Q 001548 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNAR---GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368 (1056)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~---~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~v 368 (1056)
.+|||++||+|.++|... ...+++.++..++.||+.||+|||++||+||||||+|||++.++.+
T Consensus 142 -------------lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~ 208 (478)
T PTZ00267 142 -------------LIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGII 208 (478)
T ss_pred -------------EEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcE
Confidence 489999999999988542 3357788999999999999999999999999999999999999999
Q ss_pred EEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccc
Q 001548 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1056)
Q Consensus 369 kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d 448 (1056)
||+|||+++.......
T Consensus 209 kL~DFgla~~~~~~~~---------------------------------------------------------------- 224 (478)
T PTZ00267 209 KLGDFGFSKQYSDSVS---------------------------------------------------------------- 224 (478)
T ss_pred EEEeCcCceecCCccc----------------------------------------------------------------
Confidence 9999999876441000
Q ss_pred cCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCC
Q 001548 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR 528 (1056)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~ 528 (1056)
.......+||+.|+|||++.+..++.++|||||||++|||+++
T Consensus 225 -------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg 267 (478)
T PTZ00267 225 -------------------------------------LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTL 267 (478)
T ss_pred -------------------------------------cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhC
Confidence 0001145799999999999999999999999999999999986
Q ss_pred ---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001548 529 ---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1056)
Q Consensus 529 ---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~ 588 (1056)
|...... ..+..+.....++.....++.+.+||.+||++||.+||++.+++.|+|+...
T Consensus 268 ~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~~ 329 (478)
T PTZ00267 268 HRPFKGPSQR-EIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKYV 329 (478)
T ss_pred CCCCCCCCHH-HHHHHHHhCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHHH
Confidence 4332222 2223332333333444567889999999999999999999999999998754
No 78
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=1.4e-28 Score=275.70 Aligned_cols=247 Identities=21% Similarity=0.316 Sum_probs=218.2
Q ss_pred ecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEE
Q 001548 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVK 854 (1056)
Q Consensus 775 l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~ 854 (1056)
+..++..|.++.|||....+.++-.+|.|.|||+++. .....+.-..-+|.+..|-.- .+++++|+.|+.|+
T Consensus 9 ~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetq-------tmVksfeV~~~PvRa~kfiaR-knWiv~GsDD~~Ir 80 (794)
T KOG0276|consen 9 FQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQ-------TMVKSFEVSEVPVRAAKFIAR-KNWIVTGSDDMQIR 80 (794)
T ss_pred hhccCCceeeeecCCCCceEEEeeecCeeEEEecccc-------eeeeeeeecccchhhheeeec-cceEEEecCCceEE
Confidence 4568999999999999999999999999999999862 111222234567778888776 88999999999999
Q ss_pred EEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCC-ceeEEEe-CCCCeEEEEEccCCCcEEEEE
Q 001548 855 LWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEK-NSLATIK-NIANVCCVQFSAHSSHLLAFG 932 (1056)
Q Consensus 855 lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~-~~~~~~~-~~~~V~sv~fsp~~~~~lasG 932 (1056)
+|+..|++.++.|..|.+-|.|++.|| ...+++|+|+|-+|++||-... .+.++|. |..-|.+|+|+|...+.+|++
T Consensus 81 Vfnynt~ekV~~FeAH~DyIR~iavHP-t~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~ 159 (794)
T KOG0276|consen 81 VFNYNTGEKVKTFEAHSDYIRSIAVHP-TLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASA 159 (794)
T ss_pred EEecccceeeEEeeccccceeeeeecC-CCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeee
Confidence 999999999999999999999999999 6678999999999999999876 4677887 567799999999999999999
Q ss_pred eCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCC---EEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcE
Q 001548 933 SADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSG---TLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEK 1009 (1056)
Q Consensus 933 s~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs~~~---~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~V 1009 (1056)
|.|++|++|.+.+..+ ..++.||.+.|+||.|.+++ +|+||+.|.+|||||.+ +..|+.++.||++.|
T Consensus 160 sLDrTVKVWslgs~~~-nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQ--------tk~CV~TLeGHt~Nv 230 (794)
T KOG0276|consen 160 SLDRTVKVWSLGSPHP-NFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQ--------TKSCVQTLEGHTNNV 230 (794)
T ss_pred eccccEEEEEcCCCCC-ceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecc--------hHHHHHHhhcccccc
Confidence 9999999999988664 78999999999999998666 89999999999999999 678999999999999
Q ss_pred EEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCCe
Q 001548 1010 VGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWGC 1050 (1056)
Q Consensus 1010 v~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~~ 1050 (1056)
..++ |+|.=..++|||-|++++||+-.+=.
T Consensus 231 s~v~-----------fhp~lpiiisgsEDGTvriWhs~Ty~ 260 (794)
T KOG0276|consen 231 SFVF-----------FHPELPIIISGSEDGTVRIWNSKTYK 260 (794)
T ss_pred eEEE-----------ecCCCcEEEEecCCccEEEecCccee
Confidence 7766 78888899999999999999976543
No 79
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.96 E-value=4.8e-30 Score=287.55 Aligned_cols=202 Identities=14% Similarity=0.133 Sum_probs=156.5
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+......+.. ...+|+|+.|++|.+++...+ .+++..++.++.||+.||
T Consensus 52 ~~~l~~l~hp~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l 114 (291)
T cd05612 52 KRVLKEVSHPFIIRLFWTEHDQRF----------------LYMLMEYVPGGELFSYLRNSG-RFSNSTGLFYASEIVCAL 114 (291)
T ss_pred HHHHHhCCCCcHhhhHhhhccCCe----------------EEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHH
Confidence 456788899999976543221110 124899999999999997765 466778999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 115 ~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~---------------------------------------- 154 (291)
T cd05612 115 EYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR---------------------------------------- 154 (291)
T ss_pred HHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC----------------------------------------
Confidence 9999999999999999999999999999999988654310
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
....+||+.|+|||
T Consensus 155 ------------------------------------------------------------------~~~~~gt~~y~aPE 168 (291)
T cd05612 155 ------------------------------------------------------------------TWTLCGTPEYLAPE 168 (291)
T ss_pred ------------------------------------------------------------------cccccCChhhcCHH
Confidence 00346888999999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCC----
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT---- 575 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt---- 575 (1056)
++.+..++.++|||||||+||||+++ |................. +.....++.+.+||.+||+.||.+||+
T Consensus 169 ~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~ 246 (291)
T cd05612 169 VIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKL--EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKN 246 (291)
T ss_pred HHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCc--CCCccCCHHHHHHHHHHcCCCHHHccCCccC
Confidence 99998899999999999999999986 433332222222222221 112234788999999999999999995
Q ss_pred -HHHHhhhhhhhhhh
Q 001548 576 -TREILQSEVTNEFQ 589 (1056)
Q Consensus 576 -~~eil~~~~~~~~~ 589 (1056)
+.++++||||....
T Consensus 247 ~~~~~l~h~~~~~~~ 261 (291)
T cd05612 247 GADDVKNHRWFKSVD 261 (291)
T ss_pred CHHHHhcCccccCCC
Confidence 99999999997643
No 80
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.96 E-value=5.8e-30 Score=285.93 Aligned_cols=208 Identities=13% Similarity=0.159 Sum_probs=157.7
Q ss_pred hhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHH
Q 001548 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVA 340 (1056)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~QIl~ 340 (1056)
...++....|++++.+......+... ..+|+|++|++|.+++... ...+++..++.++.||+.
T Consensus 50 E~~il~~l~~~~iv~~~~~~~~~~~~----------------~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~ 113 (285)
T cd05631 50 EKRILEKVNSRFVVSLAYAYETKDAL----------------CLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCC 113 (285)
T ss_pred HHHHHHhcCCCcEEEEEEEEccCCeE----------------EEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHH
Confidence 35577788999988765443222111 2489999999999988653 335788899999999999
Q ss_pred HHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccc
Q 001548 341 LVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (1056)
Q Consensus 341 gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 420 (1056)
||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 114 ~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-------------------------------------- 155 (285)
T cd05631 114 GLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG-------------------------------------- 155 (285)
T ss_pred HHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC--------------------------------------
Confidence 999999999999999999999999999999999988653210
Q ss_pred ccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccC
Q 001548 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (1056)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 500 (1056)
......+||+.|+|
T Consensus 156 ------------------------------------------------------------------~~~~~~~g~~~y~a 169 (285)
T cd05631 156 ------------------------------------------------------------------ETVRGRVGTVGYMA 169 (285)
T ss_pred ------------------------------------------------------------------CeecCCCCCCCccC
Confidence 00113468999999
Q ss_pred cccccCCCCCccchhHHHHHHHHHHhCC---CCcHHH---HHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCC
Q 001548 501 PEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERA---LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (1056)
Q Consensus 501 PE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~---~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rp 574 (1056)
||++.+..++.++|||||||+||||++| |..... .......+.. ...+.....++.+.+|+.+||.+||.+||
T Consensus 170 PE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~li~~~l~~~P~~R~ 248 (285)
T cd05631 170 PEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE-DQEEYSEKFSEDAKSICRMLLTKNPKERL 248 (285)
T ss_pred HhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhc-ccccCCccCCHHHHHHHHHHhhcCHHHhc
Confidence 9999999999999999999999999986 332211 1112222211 11222335678899999999999999999
Q ss_pred C-----HHHHhhhhhhhhhhh
Q 001548 575 T-----TREILQSEVTNEFQE 590 (1056)
Q Consensus 575 t-----~~eil~~~~~~~~~~ 590 (1056)
+ ++++++||||.....
T Consensus 249 ~~~~~~~~~~~~h~~~~~~~~ 269 (285)
T cd05631 249 GCRGNGAAGVKQHPIFKNINF 269 (285)
T ss_pred CCCCCCHHHHhcCHhhcCCCH
Confidence 7 899999999987643
No 81
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.96 E-value=7.1e-30 Score=291.35 Aligned_cols=204 Identities=16% Similarity=0.154 Sum_probs=157.4
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+......+... ..+|||++|++|.+++...+ .+++.+++.++.||+.||
T Consensus 46 ~~~l~~l~hp~iv~~~~~~~~~~~~----------------~lv~Ey~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL 108 (328)
T cd05593 46 SRVLKNTRHPFLTSLKYSFQTKDRL----------------CFVMEYVNGGELFFHLSRER-VFSEDRTRFYGAEIVSAL 108 (328)
T ss_pred HHHHHhCCCCCCcceEEEEEcCCEE----------------EEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHH
Confidence 4567888999999865543322211 24899999999999987654 567779999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 109 ~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~---------------------------------------- 148 (328)
T cd05593 109 DYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD---------------------------------------- 148 (328)
T ss_pred HHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc----------------------------------------
Confidence 9999999999999999999999999999999988653200
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......+||+.|+|||
T Consensus 149 ---------------------------------------------------------------~~~~~~~~gt~~y~aPE 165 (328)
T cd05593 149 ---------------------------------------------------------------AATMKTFCGTPEYLAPE 165 (328)
T ss_pred ---------------------------------------------------------------ccccccccCCcCccChh
Confidence 00011457899999999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCC-----
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP----- 574 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rp----- 574 (1056)
++.+..++.++|||||||+||||++| |................. +.....++.+.+|+.+||++||.+||
T Consensus 166 ~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~ 243 (328)
T cd05593 166 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDI--KFPRTLSADAKSLLSGLLIKDPNKRLGGGPD 243 (328)
T ss_pred hhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCc--cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCC
Confidence 99999999999999999999999986 333222222222222111 12234578899999999999999997
Q ss_pred CHHHHhhhhhhhhh
Q 001548 575 TTREILQSEVTNEF 588 (1056)
Q Consensus 575 t~~eil~~~~~~~~ 588 (1056)
++.++++||||...
T Consensus 244 ~~~~il~h~~~~~~ 257 (328)
T cd05593 244 DAKEIMRHSFFTGV 257 (328)
T ss_pred CHHHHhcCCCcCCC
Confidence 89999999999764
No 82
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.96 E-value=5.5e-30 Score=293.63 Aligned_cols=202 Identities=15% Similarity=0.106 Sum_probs=158.8
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+.......... ..+|+|+.||+|.+++...+ .+++..++.++.||+.||
T Consensus 82 ~~~l~~l~hp~Iv~~~~~~~~~~~~----------------~lv~Ey~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~aL 144 (340)
T PTZ00426 82 RKILNYINHPFCVNLYGSFKDESYL----------------YLVLEFVIGGEFFTFLRRNK-RFPNDVGCFYAAQIVLIF 144 (340)
T ss_pred HHHHHhCCCCCCcceEEEEEeCCEE----------------EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHH
Confidence 4567788999999876654322211 14899999999999997765 467778999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 145 ~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~---------------------------------------- 184 (340)
T PTZ00426 145 EYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR---------------------------------------- 184 (340)
T ss_pred HHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC----------------------------------------
Confidence 9999999999999999999999999999999988653200
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
....+||+.|+|||
T Consensus 185 ------------------------------------------------------------------~~~~~gt~~y~aPE 198 (340)
T PTZ00426 185 ------------------------------------------------------------------TYTLCGTPEYIAPE 198 (340)
T ss_pred ------------------------------------------------------------------cceecCChhhcCHH
Confidence 01356899999999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCC-----
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP----- 574 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rp----- 574 (1056)
++.+..++.++|||||||+||||++| |...................| ...++.+.+|+.+||++||.+|+
T Consensus 199 ~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p--~~~~~~~~~li~~~l~~dp~~R~~~~~~ 276 (340)
T PTZ00426 199 ILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFP--KFLDNNCKHLMKKLLSHDLTKRYGNLKK 276 (340)
T ss_pred HHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCC--CCCCHHHHHHHHHHcccCHHHcCCCCCC
Confidence 99998899999999999999999986 433333333333333222222 23477889999999999999995
Q ss_pred CHHHHhhhhhhhhhh
Q 001548 575 TTREILQSEVTNEFQ 589 (1056)
Q Consensus 575 t~~eil~~~~~~~~~ 589 (1056)
++.++++||||....
T Consensus 277 ~~~~~~~hp~f~~~~ 291 (340)
T PTZ00426 277 GAQNVKEHPWFGNID 291 (340)
T ss_pred CHHHHHcCCCcCCCC
Confidence 899999999998643
No 83
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.96 E-value=1.5e-29 Score=282.20 Aligned_cols=248 Identities=16% Similarity=0.135 Sum_probs=163.9
Q ss_pred cccceeeeCCCCC-ccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCccc
Q 001548 221 KGKGIVCRGPPLN-AFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1056)
Q Consensus 221 ~g~Gvv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1056)
+|+|+||++...+ +..+.-..... ............++..-.+.+....||||+.+.+......... ...
T Consensus 11 g~~g~v~~~~~~~~~~~~aiK~~~~-~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~----~~~---- 81 (288)
T cd07863 11 GAYGTVYKARDPHSGHFVALKSVRV-QTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDR----ETK---- 81 (288)
T ss_pred cCCeEEEEEEECCCCcEEEEEEecc-CcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCC----Cce----
Confidence 4789999997632 11110011100 0001112222223333334455557999998766533211110 000
Q ss_pred ccCCCcccccCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhc
Q 001548 300 WIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1056)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~ 378 (1056)
-...++++.+ +|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 82 ---~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~ 157 (288)
T cd07863 82 ---VTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARI 157 (288)
T ss_pred ---EEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCcccc
Confidence 1137788875 8999986643 3478889999999999999999999999999999999999999999999998865
Q ss_pred ccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCc
Q 001548 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1056)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~ 458 (1056)
....
T Consensus 158 ~~~~---------------------------------------------------------------------------- 161 (288)
T cd07863 158 YSCQ---------------------------------------------------------------------------- 161 (288)
T ss_pred ccCc----------------------------------------------------------------------------
Confidence 4310
Q ss_pred ccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCCCCc---HHHH
Q 001548 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDS---ERAL 535 (1056)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~f~~---~~~~ 535 (1056)
...+...||..|+|||++.+..++.++|||||||++|||+++.+. ....
T Consensus 162 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~ 213 (288)
T cd07863 162 ----------------------------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA 213 (288)
T ss_pred ----------------------------ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH
Confidence 000134678899999999998999999999999999999986322 2111
Q ss_pred H---HHHHhhcc---CCCC-------------------CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 536 A---AAMSDLRD---RILP-------------------PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 536 ~---~~~~~~~~---~~lp-------------------~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
. .....+.. ..++ ...+..+..+.+|+.+||++||.+|||+.|++.||||
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 214 DQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred HHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 1 11111100 0000 0112456677899999999999999999999999997
No 84
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.96 E-value=1.8e-27 Score=253.72 Aligned_cols=286 Identities=21% Similarity=0.279 Sum_probs=238.7
Q ss_pred ccccccccccceeeecccccCCCCcE--EEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCC
Q 001548 723 NDLLRDRENLFLAQQDQEIQNPTDRL--GAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVS 800 (1056)
Q Consensus 723 ~~~l~gh~~~v~~~~~~~~~~~~~~l--s~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~D 800 (1056)
......|...|-++.- +|+..| +|+-|..--+|+..+++.... +.+|+..|.++.|+.+|.+||||+.+
T Consensus 57 ~~tF~~H~~svFavsl----~P~~~l~aTGGgDD~AflW~~~~ge~~~e-----ltgHKDSVt~~~FshdgtlLATGdms 127 (399)
T KOG0296|consen 57 LVTFDKHTDSVFAVSL----HPNNNLVATGGGDDLAFLWDISTGEFAGE-----LTGHKDSVTCCSFSHDGTLLATGDMS 127 (399)
T ss_pred eeehhhcCCceEEEEe----CCCCceEEecCCCceEEEEEccCCcceeE-----ecCCCCceEEEEEccCceEEEecCCC
Confidence 4556778888888765 455555 677888999999998875443 45999999999999999999999999
Q ss_pred CcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEe
Q 001548 801 KKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFS 880 (1056)
Q Consensus 801 g~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fs 880 (1056)
|.|+||+..+. .........-..|.=++|+|. ...|+.|+.||.|-+|.+.++...+.|.+|..++++=.|.
T Consensus 128 G~v~v~~~stg-------~~~~~~~~e~~dieWl~WHp~-a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~ 199 (399)
T KOG0296|consen 128 GKVLVFKVSTG-------GEQWKLDQEVEDIEWLKWHPR-AHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFI 199 (399)
T ss_pred ccEEEEEcccC-------ceEEEeecccCceEEEEeccc-ccEEEeecCCCcEEEEECCCcceeeEecCCCCCccccccc
Confidence 99999999862 222222245677888999996 9999999999999999999988899999999999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCceeEEEeC-----------------------CC-----------------------
Q 001548 881 QVHPTKLASGSDDCSVKLWNINEKNSLATIKN-----------------------IA----------------------- 914 (1056)
Q Consensus 881 p~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~~-----------------------~~----------------------- 914 (1056)
| +|..+++|.+||+|++|++.+++++..+.. ..
T Consensus 200 p-dGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l 278 (399)
T KOG0296|consen 200 P-DGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPEL 278 (399)
T ss_pred C-CCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccc
Confidence 9 899999999999999999999887766540 00
Q ss_pred ------CeEEEEEccCCC--cEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEECC
Q 001548 915 ------NVCCVQFSAHSS--HLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLK 986 (1056)
Q Consensus 915 ------~V~sv~fsp~~~--~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs~~~~L~SgS~Dg~IkiWdl~ 986 (1056)
.+.||.|.|... .++|+|+-||+|-|||+...+. +....|..+|..+.|.+..+|++++.||.|+.||.+
T Consensus 279 ~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~--R~~c~he~~V~~l~w~~t~~l~t~c~~g~v~~wDaR 356 (399)
T KOG0296|consen 279 KPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTL--RHICEHEDGVTKLKWLNTDYLLTACANGKVRQWDAR 356 (399)
T ss_pred cccchhhhhhhhhcccccccchhhcccccceEEEEecccchh--heeccCCCceEEEEEcCcchheeeccCceEEeeecc
Confidence 011233333221 2789999999999999987664 455679999999999887889999999999999999
Q ss_pred CCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCC
Q 001548 987 RTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTS 1047 (1056)
Q Consensus 987 ~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~ 1047 (1056)
+|.+++++.||...|+.+. .+|+++.++|+|.|.+.+|++++
T Consensus 357 --------tG~l~~~y~GH~~~Il~f~-----------ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 357 --------TGQLKFTYTGHQMGILDFA-----------LSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred --------ccceEEEEecCchheeEEE-----------EcCCCcEEEEecCCCeEEEEecC
Confidence 7899999999999999999 78899999999999999999875
No 85
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.96 E-value=8.5e-30 Score=289.65 Aligned_cols=198 Identities=17% Similarity=0.167 Sum_probs=153.6
Q ss_pred CCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhc
Q 001548 269 NASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQ 348 (1056)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~ 348 (1056)
..||||+.+.......... ..+|||++|++|.+++...+ .+++..++.++.||+.||+|||++
T Consensus 53 ~~h~~iv~~~~~~~~~~~~----------------~iv~Ey~~~g~L~~~i~~~~-~l~~~~~~~~~~ql~~~L~~lH~~ 115 (320)
T cd05590 53 RNHPFLTQLYCCFQTPDRL----------------FFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEITSALMFLHDK 115 (320)
T ss_pred cCCCchhceeeEEEcCCEE----------------EEEEcCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 4699998766543322111 24899999999999997654 467779999999999999999999
Q ss_pred CcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccccccccc
Q 001548 349 GVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWS 428 (1056)
Q Consensus 349 gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 428 (1056)
||+||||||+|||++.++.+||+|||+++......
T Consensus 116 ~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~--------------------------------------------- 150 (320)
T cd05590 116 GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG--------------------------------------------- 150 (320)
T ss_pred CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC---------------------------------------------
Confidence 99999999999999999999999999886532000
Q ss_pred ccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCC
Q 001548 429 LFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV 508 (1056)
Q Consensus 429 ~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~ 508 (1056)
.......||+.|+|||++.+..
T Consensus 151 ----------------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~ 172 (320)
T cd05590 151 ----------------------------------------------------------KTTSTFCGTPDYIAPEILQEML 172 (320)
T ss_pred ----------------------------------------------------------CcccccccCccccCHHHHcCCC
Confidence 0011456899999999999999
Q ss_pred CCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCH------HHH
Q 001548 509 CTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT------REI 579 (1056)
Q Consensus 509 ~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~------~ei 579 (1056)
++.++|||||||++|||++| |................... ....++.+.+|+.+||++||.+||++ .++
T Consensus 173 ~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~ 250 (320)
T cd05590 173 YGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVY--PTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAI 250 (320)
T ss_pred CCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCC--CCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHH
Confidence 99999999999999999986 43333333333333322222 22457889999999999999999998 999
Q ss_pred hhhhhhhhh
Q 001548 580 LQSEVTNEF 588 (1056)
Q Consensus 580 l~~~~~~~~ 588 (1056)
++||||...
T Consensus 251 ~~h~~f~~~ 259 (320)
T cd05590 251 LRHPFFKEL 259 (320)
T ss_pred HcCCCcCCC
Confidence 999999764
No 86
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-29 Score=285.47 Aligned_cols=205 Identities=14% Similarity=0.155 Sum_probs=160.4
Q ss_pred hhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Q 001548 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (1056)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ 343 (1056)
.++..-.||+|+.+..+-.++ +.-+.+.+||.||-....+-.-++.+.+.++..+++|+|+||.
T Consensus 81 eILa~CdHP~ivkLl~ayy~e----------------nkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn 144 (1187)
T KOG0579|consen 81 EILAECDHPVIVKLLSAYYFE----------------NKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALN 144 (1187)
T ss_pred hhhhcCCChHHHHHHHHHhcc----------------CceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHH
Confidence 467777899988765552222 3356689999999999999888899999999999999999999
Q ss_pred HhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccc
Q 001548 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (1056)
Q Consensus 344 ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 423 (1056)
|||+++|||||||..|||++.+|.|+++|||++......
T Consensus 145 ~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t----------------------------------------- 183 (1187)
T KOG0579|consen 145 WLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKST----------------------------------------- 183 (1187)
T ss_pred HHhhcchhhhhccccceEEEecCcEeeecccccccchhH-----------------------------------------
Confidence 999999999999999999999999999999986442200
Q ss_pred cccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCccc
Q 001548 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (1056)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 503 (1056)
.+.-.+++|||+|||||+
T Consensus 184 --------------------------------------------------------------~qkRDsFIGTPYWMAPEV 201 (1187)
T KOG0579|consen 184 --------------------------------------------------------------RQKRDSFIGTPYWMAPEV 201 (1187)
T ss_pred --------------------------------------------------------------HhhhccccCCcccccchh
Confidence 001126899999999998
Q ss_pred ccC-----CCCCccchhHHHHHHHHHHhCCCCcHHHH--HHHHHhhccCCCCCCC---CCCChhHHHHHHhccccCCCCC
Q 001548 504 LSG-----GVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSF---LSENPKEAGFCLWQLHPEPLSR 573 (1056)
Q Consensus 504 l~~-----~~~t~~sDIwSLGvlL~eLlt~f~~~~~~--~~~~~~~~~~~lp~~~---~~~~~~~~~li~~lL~~dP~~R 573 (1056)
... .+|++++||||||++|.||...-++...+ ...+-.+... -||.+ ...+..+.||+.+||.+||..|
T Consensus 202 vmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS-ePPTLlqPS~Ws~~F~DfLk~cL~Knp~~R 280 (1187)
T KOG0579|consen 202 VMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS-EPPTLLQPSHWSRSFSDFLKRCLVKNPRNR 280 (1187)
T ss_pred eeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc-CCCcccCcchhhhHHHHHHHHHHhcCCccC
Confidence 753 78999999999999999999753333222 2222222222 22222 2345678999999999999999
Q ss_pred CCHHHHhhhhhhhhh
Q 001548 574 PTTREILQSEVTNEF 588 (1056)
Q Consensus 574 pt~~eil~~~~~~~~ 588 (1056)
|+++++|+||||...
T Consensus 281 p~aaqll~Hpfv~~~ 295 (1187)
T KOG0579|consen 281 PPAAQLLKHPFVQNA 295 (1187)
T ss_pred CCHHHHhhCcccccC
Confidence 999999999999864
No 87
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.96 E-value=1.1e-29 Score=289.10 Aligned_cols=204 Identities=20% Similarity=0.186 Sum_probs=158.2
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+......+... ..+|+|+.|++|.+++...+. +.+..++.++.||+.||
T Consensus 51 ~~il~~l~hp~iv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~qi~~~l 113 (323)
T cd05584 51 RNILEAVKHPFIVDLIYAFQTGGKL----------------YLILEYLSGGELFMHLEREGI-FMEDTACFYLSEISLAL 113 (323)
T ss_pred HHHHHhCCCCchhceeeEEecCCeE----------------EEEEeCCCCchHHHHHHHcCC-CCHHHHHHHHHHHHHHH
Confidence 4567888999999866553322211 248999999999999977654 55668899999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 114 ~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--------------------------------------- 154 (323)
T cd05584 114 EHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG--------------------------------------- 154 (323)
T ss_pred HHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC---------------------------------------
Confidence 99999999999999999999999999999999886532100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......||+.|+|||
T Consensus 155 ----------------------------------------------------------------~~~~~~~gt~~y~aPE 170 (323)
T cd05584 155 ----------------------------------------------------------------TVTHTFCGTIEYMAPE 170 (323)
T ss_pred ----------------------------------------------------------------CcccccCCCccccChh
Confidence 0001356899999999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCC-----
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP----- 574 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rp----- 574 (1056)
++.+..++.++|||||||+||||++| |................ .+.....++.+.+||.+||++||.+||
T Consensus 171 ~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~ 248 (323)
T cd05584 171 ILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGK--LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPG 248 (323)
T ss_pred hccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCC
Confidence 99998899999999999999999987 43333322222222222 122234578899999999999999999
Q ss_pred CHHHHhhhhhhhhh
Q 001548 575 TTREILQSEVTNEF 588 (1056)
Q Consensus 575 t~~eil~~~~~~~~ 588 (1056)
++.++++||||...
T Consensus 249 ~~~~l~~h~~~~~~ 262 (323)
T cd05584 249 DAAEVQSHPFFRHV 262 (323)
T ss_pred CHHHHhcCCCcCCC
Confidence 89999999999764
No 88
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.4e-30 Score=292.24 Aligned_cols=241 Identities=17% Similarity=0.131 Sum_probs=183.3
Q ss_pred ceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCC
Q 001548 224 GIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGG 303 (1056)
Q Consensus 224 Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (1056)
|+||-|..- ..-.+.++........+...--- ..+++...++|.|||.-+.-+..|+-.
T Consensus 589 G~VYA~RD~--~tqvrIaIKEIpekdsr~~QPLh---EEIaLH~~LrHkNIVrYLGs~senGf~---------------- 647 (1226)
T KOG4279|consen 589 GTVYAARDM--DTQVRIAIKEIPEKDSREVQPLH---EEIALHSTLRHKNIVRYLGSVSENGFF---------------- 647 (1226)
T ss_pred eEEEeeccc--cceeEEEeeecccccchhhccHH---HHHHHHHHHhhHhHHHHhhccCCCCeE----------------
Confidence 899999863 22112333322222222221111 225578888999999754443322222
Q ss_pred CcccccCCCCCHHHHHHhcCCCC--CHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEc-cCCcEEEeCcchhhccc
Q 001548 304 LRQGSSDHGVNLREWLNARGHKG--KRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL-QSNQVKYIGPIIQKETL 380 (1056)
Q Consensus 304 ~~~~~~~~GgsL~~~l~~~~~~~--~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~-~~~~vkl~Dfgla~~~~ 380 (1056)
.++||.++||+|..+|+..=.++ ++..+-.|.+||++||.|||.+.|||||||-+|+||. -+|.+||.|||.++.+.
T Consensus 648 kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA 727 (1226)
T KOG4279|consen 648 KIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA 727 (1226)
T ss_pred EEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhc
Confidence 34899999999999998764444 7778889999999999999999999999999999996 67999999999998865
Q ss_pred ccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCccc
Q 001548 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1056)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~ 460 (1056)
.- +
T Consensus 728 gi--n--------------------------------------------------------------------------- 730 (1226)
T KOG4279|consen 728 GI--N--------------------------------------------------------------------------- 730 (1226)
T ss_pred cC--C---------------------------------------------------------------------------
Confidence 20 0
Q ss_pred ccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCC--CCccchhHHHHHHHHHHhCCCCcH----HH
Q 001548 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV--CTTSSNIYSLGVLFFELFGRFDSE----RA 534 (1056)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~--~t~~sDIwSLGvlL~eLlt~f~~~----~~ 534 (1056)
+.+ .+..||..|||||+|..++ |+.++|||||||++.||.||-+++ .+
T Consensus 731 P~T--------------------------ETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp 784 (1226)
T KOG4279|consen 731 PCT--------------------------ETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP 784 (1226)
T ss_pred ccc--------------------------cccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh
Confidence 000 1567999999999998855 899999999999999999985554 44
Q ss_pred HHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001548 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1056)
Q Consensus 535 ~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~ 588 (1056)
..++++.-.....||.+.+.+.+++.||++|+.+||..||+|.++|+.||++..
T Consensus 785 qAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 785 QAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred hHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 555666666677788888889999999999999999999999999999999865
No 89
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.96 E-value=6.3e-30 Score=291.28 Aligned_cols=205 Identities=18% Similarity=0.189 Sum_probs=157.1
Q ss_pred hhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Q 001548 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~g 341 (1056)
...++....||||+.+......+... ..+|||++|++|.+++...+ .+++..++.++.||+.|
T Consensus 45 e~~~l~~~~hp~i~~~~~~~~~~~~~----------------~lv~E~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~a 107 (325)
T cd05594 45 ENRVLQNSRHPFLTALKYSFQTHDRL----------------CFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSA 107 (325)
T ss_pred HHHHHHhCCCCCCCceEEEEEcCCEE----------------EEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHH
Confidence 34567788999999876554322211 14899999999999987654 56777999999999999
Q ss_pred HHHhhh-cCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccc
Q 001548 342 VDYHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (1056)
Q Consensus 342 L~ylHs-~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 420 (1056)
|.|||+ +||+||||||+|||++.++.+||+|||+++......
T Consensus 108 L~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~------------------------------------- 150 (325)
T cd05594 108 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG------------------------------------- 150 (325)
T ss_pred HHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC-------------------------------------
Confidence 999997 799999999999999999999999999886532100
Q ss_pred ccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccC
Q 001548 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (1056)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 500 (1056)
......+||+.|+|
T Consensus 151 ------------------------------------------------------------------~~~~~~~gt~~y~a 164 (325)
T cd05594 151 ------------------------------------------------------------------ATMKTFCGTPEYLA 164 (325)
T ss_pred ------------------------------------------------------------------cccccccCCcccCC
Confidence 00114568999999
Q ss_pred cccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCC---
Q 001548 501 PEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP--- 574 (1056)
Q Consensus 501 PE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rp--- 574 (1056)
||++.+..++.++|||||||+||||++| |................. ......++.+.+|+.+||++||.+|+
T Consensus 165 PE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~ 242 (325)
T cd05594 165 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI--RFPRTLSPEAKSLLSGLLKKDPKQRLGGG 242 (325)
T ss_pred HHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCC--CCCCCCCHHHHHHHHHHhhcCHHHhCCCC
Confidence 9999999999999999999999999987 332222211111111111 11234578899999999999999997
Q ss_pred --CHHHHhhhhhhhhh
Q 001548 575 --TTREILQSEVTNEF 588 (1056)
Q Consensus 575 --t~~eil~~~~~~~~ 588 (1056)
++.++++||||...
T Consensus 243 ~~~~~~il~h~~~~~~ 258 (325)
T cd05594 243 PDDAKEIMQHKFFAGI 258 (325)
T ss_pred CCCHHHHhcCCCcCCC
Confidence 99999999999864
No 90
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.96 E-value=1.3e-29 Score=288.09 Aligned_cols=199 Identities=18% Similarity=0.177 Sum_probs=155.0
Q ss_pred cCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhh
Q 001548 268 SNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT 347 (1056)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs 347 (1056)
...||+|+.+......+... ..+|||++|++|..++...+ .+++..++.++.||+.||.|||+
T Consensus 52 ~~~hp~i~~~~~~~~~~~~~----------------~lv~E~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~ 114 (321)
T cd05591 52 AAKHPFLTALHCCFQTKDRL----------------FFVMEYVNGGDLMFQIQRSR-KFDEPRSRFYAAEVTLALMFLHR 114 (321)
T ss_pred ccCCCCccceeeEEEcCCeE----------------EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 34799998766554332211 24899999999999997654 46777899999999999999999
Q ss_pred cCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccc
Q 001548 348 QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWW 427 (1056)
Q Consensus 348 ~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 427 (1056)
+||+||||||+|||++.++.+||+|||+++......
T Consensus 115 ~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~-------------------------------------------- 150 (321)
T cd05591 115 HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG-------------------------------------------- 150 (321)
T ss_pred CCeeccCCCHHHeEECCCCCEEEeecccceecccCC--------------------------------------------
Confidence 999999999999999999999999999886532000
Q ss_pred cccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCC
Q 001548 428 SLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG 507 (1056)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~ 507 (1056)
......+||+.|+|||++.+.
T Consensus 151 -----------------------------------------------------------~~~~~~~gt~~y~aPE~~~~~ 171 (321)
T cd05591 151 -----------------------------------------------------------VTTTTFCGTPDYIAPEILQEL 171 (321)
T ss_pred -----------------------------------------------------------ccccccccCccccCHHHHcCC
Confidence 001145689999999999999
Q ss_pred CCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCC-------CHH
Q 001548 508 VCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP-------TTR 577 (1056)
Q Consensus 508 ~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rp-------t~~ 577 (1056)
.++.++|||||||++|||++| |...................| ...++.+.+|+.+||++||.+|| ++.
T Consensus 172 ~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p--~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~ 249 (321)
T cd05591 172 EYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYP--VWLSKEAVSILKAFMTKNPNKRLGCVASQGGED 249 (321)
T ss_pred CCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC--CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHH
Confidence 999999999999999999986 444433333333333332222 23578899999999999999999 999
Q ss_pred HHhhhhhhhhh
Q 001548 578 EILQSEVTNEF 588 (1056)
Q Consensus 578 eil~~~~~~~~ 588 (1056)
++++||||...
T Consensus 250 ~~~~hp~~~~~ 260 (321)
T cd05591 250 AIKQHPFFKEI 260 (321)
T ss_pred HHhcCCccCCC
Confidence 99999999653
No 91
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.96 E-value=1.7e-29 Score=286.60 Aligned_cols=199 Identities=18% Similarity=0.174 Sum_probs=152.5
Q ss_pred cCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhh
Q 001548 268 SNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT 347 (1056)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs 347 (1056)
...||+|+.+......+... ..+|||+.|++|.+++...+ .++...++.++.||+.||+|||+
T Consensus 52 ~~~~~~i~~~~~~~~~~~~~----------------~lv~E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~~l~~lH~ 114 (316)
T cd05620 52 AWENPFLTHLYCTFQTKEHL----------------FFVMEFLNGGDLMFHIQDKG-RFDLYRATFYAAEIVCGLQFLHS 114 (316)
T ss_pred ccCCCCccCeeEEEEeCCEE----------------EEEECCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 34789998766554322211 24899999999999997754 46777999999999999999999
Q ss_pred cCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccc
Q 001548 348 QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWW 427 (1056)
Q Consensus 348 ~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 427 (1056)
+||+||||||+|||++.++.+||+|||+++.....
T Consensus 115 ~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--------------------------------------------- 149 (316)
T cd05620 115 KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG--------------------------------------------- 149 (316)
T ss_pred CCeEecCCCHHHeEECCCCCEEeCccCCCeecccC---------------------------------------------
Confidence 99999999999999999999999999987642200
Q ss_pred cccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCC
Q 001548 428 SLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG 507 (1056)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~ 507 (1056)
.......+||+.|+|||++.+.
T Consensus 150 ----------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~ 171 (316)
T cd05620 150 ----------------------------------------------------------DNRASTFCGTPDYIAPEILQGL 171 (316)
T ss_pred ----------------------------------------------------------CCceeccCCCcCccCHHHHcCC
Confidence 0001145789999999999999
Q ss_pred CCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCH-HHHhhhh
Q 001548 508 VCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT-REILQSE 583 (1056)
Q Consensus 508 ~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~-~eil~~~ 583 (1056)
.++.++|||||||++|||++| |...... .....+... .+......++++.+|+.+||++||.+||++ .++++||
T Consensus 172 ~~~~~~DiwslGvil~el~~g~~Pf~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~ 249 (316)
T cd05620 172 KYTFSVDWWSFGVLLYEMLIGQSPFHGDDED-ELFESIRVD-TPHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHP 249 (316)
T ss_pred CCCcccchhhhHHHHHHHHhCCCCCCCCCHH-HHHHHHHhC-CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCC
Confidence 999999999999999999986 4333222 222222221 122222467889999999999999999998 5899999
Q ss_pred hhhhh
Q 001548 584 VTNEF 588 (1056)
Q Consensus 584 ~~~~~ 588 (1056)
||...
T Consensus 250 ~f~~~ 254 (316)
T cd05620 250 FFKTI 254 (316)
T ss_pred CcCCC
Confidence 99764
No 92
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.96 E-value=3.6e-29 Score=286.48 Aligned_cols=155 Identities=17% Similarity=0.215 Sum_probs=119.0
Q ss_pred CCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccc
Q 001548 326 GKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMF 405 (1056)
Q Consensus 326 ~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (1056)
+....+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 171 l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~-------------------- 230 (338)
T cd05102 171 LTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY-------------------- 230 (338)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcch--------------------
Confidence 556678899999999999999999999999999999999999999999998764310000
Q ss_pred cccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccc
Q 001548 406 TTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQ 485 (1056)
Q Consensus 406 ~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (1056)
T Consensus 231 -------------------------------------------------------------------------------- 230 (338)
T cd05102 231 -------------------------------------------------------------------------------- 230 (338)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHH
Q 001548 486 STSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGF 561 (1056)
Q Consensus 486 ~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~l 561 (1056)
.......++..|+|||++.+..++.++|||||||+||||++ + |............+.....+......++.+.+|
T Consensus 231 -~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 309 (338)
T cd05102 231 -VRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRI 309 (338)
T ss_pred -hcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHH
Confidence 00002345677999999999999999999999999999985 4 433222222333333333333344567889999
Q ss_pred HHhccccCCCCCCCHHHHhh
Q 001548 562 CLWQLHPEPLSRPTTREILQ 581 (1056)
Q Consensus 562 i~~lL~~dP~~Rpt~~eil~ 581 (1056)
+.+||++||.+|||+.+|++
T Consensus 310 i~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 310 MLACWQGDPKERPTFSALVE 329 (338)
T ss_pred HHHHccCChhhCcCHHHHHH
Confidence 99999999999999999986
No 93
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.96 E-value=1.2e-29 Score=291.69 Aligned_cols=234 Identities=17% Similarity=0.159 Sum_probs=162.5
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+......+.. ...+|+|+.|++|.+++... ..+++..++.++.||+.||
T Consensus 52 ~~~l~~~~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL 114 (350)
T cd05573 52 RDILADADSPWIVKLYYSFQDEEH----------------LYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLAL 114 (350)
T ss_pred HHHHHhcCCCCccchhhheecCCe----------------EEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHH
Confidence 456777789999986554332111 12489999999999999776 4567779999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
+|||++||+||||||+|||++.++.+||+|||+++...............+..
T Consensus 115 ~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~--------------------------- 167 (350)
T cd05573 115 DSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNL--------------------------- 167 (350)
T ss_pred HHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccc---------------------------
Confidence 99999999999999999999999999999999998765321110000000000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.+.. .. . . ...............+||+.|+|||
T Consensus 168 ------~~~~--------~~------------~-----~----------------~~~~~~~~~~~~~~~~gt~~y~aPE 200 (350)
T cd05573 168 ------LFRD--------NV------------L-----V----------------RRRDHKQRRVRANSTVGTPDYIAPE 200 (350)
T ss_pred ------cccc--------cc------------c-----c----------------cccccccccccccccccCccccCHH
Confidence 0000 00 0 0 0000000011122567999999999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhc--cCCCCCCCCCCChhHHHHHHhccccCCCCCCC-H
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLR--DRILPPSFLSENPKEAGFCLWQLHPEPLSRPT-T 576 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~--~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt-~ 576 (1056)
++.+..++.++|||||||+||||++| |.............. .....|.....++.+.+||.+||. ||.+||+ +
T Consensus 201 ~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~ 279 (350)
T cd05573 201 VLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSF 279 (350)
T ss_pred HHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCH
Confidence 99999999999999999999999986 433333322222222 222223333468899999999997 9999999 9
Q ss_pred HHHhhhhhhhhh
Q 001548 577 REILQSEVTNEF 588 (1056)
Q Consensus 577 ~eil~~~~~~~~ 588 (1056)
.++++||||...
T Consensus 280 ~~ll~hp~~~~~ 291 (350)
T cd05573 280 EEIKSHPFFKGI 291 (350)
T ss_pred HHHhcCCCcCCC
Confidence 999999999764
No 94
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.96 E-value=2.1e-29 Score=285.90 Aligned_cols=200 Identities=19% Similarity=0.174 Sum_probs=153.5
Q ss_pred ccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q 001548 267 ASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHH 346 (1056)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylH 346 (1056)
....||||+.+......+... ..+|+|++|++|.++++..+ .+++..++.++.||+.||.|||
T Consensus 51 ~~~~hp~i~~~~~~~~~~~~~----------------~lv~e~~~gg~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH 113 (316)
T cd05592 51 LAWEHPFLTHLFCTFQTKEHL----------------FFVMEYLNGGDLMFHIQSSG-RFDEARARFYAAEIICGLQFLH 113 (316)
T ss_pred hccCCCCccceeeEEEcCCEE----------------EEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 345899999866543322111 24899999999999997765 4677789999999999999999
Q ss_pred hcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccccccc
Q 001548 347 TQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRW 426 (1056)
Q Consensus 347 s~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 426 (1056)
++||+||||||+|||++.++.+||+|||+++......
T Consensus 114 ~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~------------------------------------------- 150 (316)
T cd05592 114 KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE------------------------------------------- 150 (316)
T ss_pred HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-------------------------------------------
Confidence 9999999999999999999999999999986532100
Q ss_pred ccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccC
Q 001548 427 WSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG 506 (1056)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~ 506 (1056)
......+||+.|+|||++.+
T Consensus 151 ------------------------------------------------------------~~~~~~~gt~~y~aPE~~~~ 170 (316)
T cd05592 151 ------------------------------------------------------------GKASTFCGTPDYIAPEILKG 170 (316)
T ss_pred ------------------------------------------------------------CccccccCCccccCHHHHcC
Confidence 00014578999999999999
Q ss_pred CCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCH-HHHhhh
Q 001548 507 GVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT-REILQS 582 (1056)
Q Consensus 507 ~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~-~eil~~ 582 (1056)
..++.++|||||||++|||++| |.+............. .+......++.+.+|+.+||+.||.+||++ .++++|
T Consensus 171 ~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05592 171 QKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND--RPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQH 248 (316)
T ss_pred CCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence 9999999999999999999986 4433322222222222 222223457888999999999999999987 588899
Q ss_pred hhhhhh
Q 001548 583 EVTNEF 588 (1056)
Q Consensus 583 ~~~~~~ 588 (1056)
|||...
T Consensus 249 ~~~~~~ 254 (316)
T cd05592 249 PFFRGI 254 (316)
T ss_pred cccCCC
Confidence 999764
No 95
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.96 E-value=3.2e-29 Score=284.01 Aligned_cols=249 Identities=16% Similarity=0.154 Sum_probs=160.3
Q ss_pred hhhccccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCC
Q 001548 217 KTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1056)
Q Consensus 217 k~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1056)
|...+|+|+||++...+.... ...+.+........... .....++....||||+.+..........
T Consensus 8 ~lG~G~~g~Vy~~~~~~~~~~--~~~aiK~~~~~~~~~~~---~~E~~~l~~l~h~niv~~~~~~~~~~~~--------- 73 (317)
T cd07868 8 KVGRGTYGHVYKAKRKDGKDD--RDYALKQIEGTGISMSA---CREIALLRELKHPNVISLQKVFLSHADR--------- 73 (317)
T ss_pred ccccCCCeEEEEEEEccCCCC--ceEEEEEECCCCCcHHH---HHHHHHHHhcCCCCCcceeeeEecCCCc---------
Confidence 334457799999975321111 11111111111122222 2234578888999999875543211110
Q ss_pred cccccCCCcccccCCCCCHHHHHHhcC--------CCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEE----cc
Q 001548 297 ASCWIGGLRQGSSDHGVNLREWLNARG--------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKL----LQ 364 (1056)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~--------~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl----~~ 364 (1056)
..| .+++++. ++|.+++.... ..+++..++.+++||+.||+|||++||+||||||+|||+ ..
T Consensus 74 ~~~-----lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~ 147 (317)
T cd07868 74 KVW-----LLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPE 147 (317)
T ss_pred EEE-----EEEeccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCC
Confidence 111 2556654 58988885321 247777899999999999999999999999999999999 45
Q ss_pred CCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccc
Q 001548 365 SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANES 444 (1056)
Q Consensus 365 ~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (1056)
++.+||+|||+++....+..
T Consensus 148 ~~~~kl~DfG~a~~~~~~~~------------------------------------------------------------ 167 (317)
T cd07868 148 RGRVKIADMGFARLFNSPLK------------------------------------------------------------ 167 (317)
T ss_pred cCcEEEeecCceeccCCCCc------------------------------------------------------------
Confidence 57899999999876431100
Q ss_pred cccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccC-CCCCccchhHHHHHHHH
Q 001548 445 DINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFF 523 (1056)
Q Consensus 445 ~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~t~~sDIwSLGvlL~ 523 (1056)
+.......+||++|+|||++.+ ..++.++|||||||++|
T Consensus 168 ----------------------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ 207 (317)
T cd07868 168 ----------------------------------------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFA 207 (317)
T ss_pred ----------------------------------------cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHH
Confidence 0001124678999999999987 45899999999999999
Q ss_pred HHhCCCCcH---H------------HHHHHHHhhc------------------------cCCC---------CCCCCCCC
Q 001548 524 ELFGRFDSE---R------------ALAAAMSDLR------------------------DRIL---------PPSFLSEN 555 (1056)
Q Consensus 524 eLlt~f~~~---~------------~~~~~~~~~~------------------------~~~l---------p~~~~~~~ 555 (1056)
||+++..++ . ........+. .... .......+
T Consensus 208 el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (317)
T cd07868 208 ELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPD 287 (317)
T ss_pred HHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCC
Confidence 999862221 0 0111111000 0000 00011234
Q ss_pred hhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 556 PKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 556 ~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
+.+.+||.+||++||.+|||+.|+|+||||
T Consensus 288 ~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 288 SKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred hHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 567899999999999999999999999997
No 96
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.96 E-value=1.5e-29 Score=288.88 Aligned_cols=198 Identities=19% Similarity=0.177 Sum_probs=151.6
Q ss_pred CCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcC
Q 001548 270 ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQG 349 (1056)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~g 349 (1056)
.||||+.+......+... ..+|+||+|++|.+++...+ .+++..++.++.||+.||.|||++|
T Consensus 54 ~hp~Iv~~~~~~~~~~~~----------------~lv~e~~~~g~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~ 116 (329)
T cd05588 54 NHPFLVGLHSCFQTESRL----------------FFVIEFVSGGDLMFHMQRQR-KLPEEHARFYSAEISLALNFLHERG 116 (329)
T ss_pred CCCCCCceEEEEEcCCEE----------------EEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 799999876553322211 14899999999999987654 5777799999999999999999999
Q ss_pred cccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccc
Q 001548 350 VTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSL 429 (1056)
Q Consensus 350 IvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 429 (1056)
|+||||||+|||++.++.+||+|||+++.....
T Consensus 117 ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~----------------------------------------------- 149 (329)
T cd05588 117 IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP----------------------------------------------- 149 (329)
T ss_pred eEecCCCHHHeEECCCCCEEECcCccccccccC-----------------------------------------------
Confidence 999999999999999999999999988642200
Q ss_pred cCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCC
Q 001548 430 FPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVC 509 (1056)
Q Consensus 430 ~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~ 509 (1056)
.......+||+.|+|||++.+..+
T Consensus 150 --------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~ 173 (329)
T cd05588 150 --------------------------------------------------------GDTTSTFCGTPNYIAPEILRGEDY 173 (329)
T ss_pred --------------------------------------------------------CCccccccCCccccCHHHHcCCCC
Confidence 000114578999999999999999
Q ss_pred CccchhHHHHHHHHHHhCCCCcHH-----------HHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCC---
Q 001548 510 TTSSNIYSLGVLFFELFGRFDSER-----------ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT--- 575 (1056)
Q Consensus 510 t~~sDIwSLGvlL~eLlt~f~~~~-----------~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt--- 575 (1056)
+.++|||||||++|||++|..++. ........+.... .......++.+.+|+.+||++||.+||+
T Consensus 174 ~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~ 252 (329)
T cd05588 174 GFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ-IRIPRSLSVKASSVLKGFLNKDPKERLGCHP 252 (329)
T ss_pred CCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhccCHHHcCCCCC
Confidence 999999999999999998733221 1111122222221 1222346788999999999999999987
Q ss_pred ---HHHHhhhhhhhhh
Q 001548 576 ---TREILQSEVTNEF 588 (1056)
Q Consensus 576 ---~~eil~~~~~~~~ 588 (1056)
+.++++||||...
T Consensus 253 ~~~~~~i~~hp~~~~~ 268 (329)
T cd05588 253 QTGFRDIKSHPFFRNI 268 (329)
T ss_pred CCCHHHHhcCCCCCCC
Confidence 7899999999653
No 97
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.96 E-value=3e-29 Score=290.30 Aligned_cols=239 Identities=16% Similarity=0.127 Sum_probs=157.8
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||+|+.+......+... ..+||||+||+|.+++...+ .+++..++.++.||+.||
T Consensus 52 ~~il~~~~~~~iv~~~~~~~~~~~~----------------~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL 114 (363)
T cd05628 52 RDILVEADSLWVVKMFYSFQDKLNL----------------YLIMEFLPGGDMMTLLMKKD-TLTEEETQFYIAETVLAI 114 (363)
T ss_pred HHHHHhCCCCCcceEEEEEecCCeE----------------EEEEcCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHH
Confidence 3456777899998765543322111 24899999999999997754 467779999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
+|||++||+||||||+|||++.++.+||+|||+++.+...............+
T Consensus 115 ~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~--------------------------- 167 (363)
T cd05628 115 DSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSL--------------------------- 167 (363)
T ss_pred HHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccccccccccccc---------------------------
Confidence 99999999999999999999999999999999998654211000000000000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
..++.... +....................+||+.|+|||
T Consensus 168 -----------------------~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE 206 (363)
T cd05628 168 -----------------------PSDFTFQN------------------MNSKRKAETWKRNRRQLAFSTVGTPDYIAPE 206 (363)
T ss_pred -----------------------cccccccc------------------cccccccchhhhccccccccccCCccccCHH
Confidence 00000000 0000000000000111123568999999999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhc--c-CCCCCCCCCCChhHHHHHHhccccCCC---CC
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLR--D-RILPPSFLSENPKEAGFCLWQLHPEPL---SR 573 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~--~-~~lp~~~~~~~~~~~~li~~lL~~dP~---~R 573 (1056)
++.+..++.++|||||||+||||++| |.+............ . ..+|+ ....++.+.+|+.+|+. +|. .|
T Consensus 207 ~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~l~~-~~~~r~~r 284 (363)
T cd05628 207 VFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPP-EVPISEKAKDLILRFCC-EWEHRIGA 284 (363)
T ss_pred HHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCC-cCCCCHHHHHHHHHHcC-ChhhcCCC
Confidence 99999999999999999999999987 433333222222222 1 12232 33467889999999775 444 46
Q ss_pred CCHHHHhhhhhhhhh
Q 001548 574 PTTREILQSEVTNEF 588 (1056)
Q Consensus 574 pt~~eil~~~~~~~~ 588 (1056)
|++.||++||||...
T Consensus 285 ~~~~ei~~hp~f~~~ 299 (363)
T cd05628 285 PGVEEIKTNPFFEGV 299 (363)
T ss_pred CCHHHHhCCCCCCCC
Confidence 899999999999875
No 98
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.96 E-value=7.5e-28 Score=263.93 Aligned_cols=261 Identities=21% Similarity=0.344 Sum_probs=218.7
Q ss_pred cCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCCCCCc---ccccceEeecCCCCeEEEEEecCCCCEEEEEECCC
Q 001548 776 NNSANVICSISFDRD-EDHFAAAGVSKKIKIFEFNALFNDSV---DVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDG 851 (1056)
Q Consensus 776 ~~h~~~V~sv~fspd-g~~latg~~Dg~I~Iwdl~t~~~~~~---~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg 851 (1056)
..|.+.|+.+.+.|. ..++||++..+.|.|||+.+...... .........+|...-++|+|++.....|++|+.|+
T Consensus 121 i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~ 200 (422)
T KOG0264|consen 121 INHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDH 200 (422)
T ss_pred ccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCC
Confidence 478999999999986 56788889999999999986322111 12223466788888899999998889999999999
Q ss_pred cEEEEEcCCC-------ceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCC--CceeEEEe-CCCCeEEEEE
Q 001548 852 VVKLWDACTG-------QTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINE--KNSLATIK-NIANVCCVQF 921 (1056)
Q Consensus 852 ~V~lWD~~t~-------~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~--~~~~~~~~-~~~~V~sv~f 921 (1056)
+|++||+... .+...|.+|++.|..|+|++.+..+|+++++|+.+.|||+|+ .++..... |.+.|+|++|
T Consensus 201 ~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~f 280 (422)
T KOG0264|consen 201 TICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAF 280 (422)
T ss_pred cEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEe
Confidence 9999999643 256678999999999999999999999999999999999995 33444443 6889999999
Q ss_pred ccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCC--CEEEEEECCCeEEEEECCCCCCCC------C
Q 001548 922 SAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDS--GTLVTASTDNKLKLWDLKRTSHTG------P 993 (1056)
Q Consensus 922 sp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs~~--~~L~SgS~Dg~IkiWdl~~~~~~~------~ 993 (1056)
+|.+..+||+||.|++|.+||+|+.+.++.++.+|...|..|.|+|+ ..|+|++.|+.+.|||+.+-.... .
T Consensus 281 np~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~d 360 (422)
T KOG0264|consen 281 NPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAED 360 (422)
T ss_pred CCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhcc
Confidence 99999999999999999999999999999999999999999999954 459999999999999998532211 1
Q ss_pred CCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEE-EcCCcEEEEeCC
Q 001548 994 STNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLV-CFDFTTLSFRTS 1047 (1056)
Q Consensus 994 ~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~-s~D~~v~iW~v~ 1047 (1056)
...++++...||+..|..++ |.|...|++++ +.|..+.||+++
T Consensus 361 gppEllF~HgGH~~kV~Dfs-----------Wnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 361 GPPELLFIHGGHTAKVSDFS-----------WNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred CCcceeEEecCccccccccc-----------CCCCCCeEEEEecCCceEEEeecc
Confidence 12367899999999999999 89999998664 578888899987
No 99
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=3.4e-29 Score=289.17 Aligned_cols=204 Identities=19% Similarity=0.203 Sum_probs=150.9
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+........... .+|+++. ++|.+++......++...++.|+.||+.||
T Consensus 108 ~~~l~~l~h~~iv~~~~~~~~~~~~~----------------lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL 170 (357)
T PHA03209 108 AMLLQNVNHPSVIRMKDTLVSGAITC----------------MVLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGL 170 (357)
T ss_pred HHHHHhCCCCCCcChhheEEeCCeeE----------------EEEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence 45677889999998766544222111 3677775 589999977777788889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+|||++..+.+||+|||+++.....
T Consensus 171 ~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~---------------------------------------- 210 (357)
T PHA03209 171 RYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA---------------------------------------- 210 (357)
T ss_pred HHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC----------------------------------------
Confidence 9999999999999999999999999999999988642200
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......||+.|+|||
T Consensus 211 ----------------------------------------------------------------~~~~~~~gt~~y~aPE 226 (357)
T PHA03209 211 ----------------------------------------------------------------PAFLGLAGTVETNAPE 226 (357)
T ss_pred ----------------------------------------------------------------cccccccccccccCCe
Confidence 0001346889999999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC----CCc-----H-------HHHHHHHHhhcc--CCCCC---------------
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR----FDS-----E-------RALAAAMSDLRD--RILPP--------------- 549 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~----f~~-----~-------~~~~~~~~~~~~--~~lp~--------------- 549 (1056)
++.+..++.++|||||||+||||+++ |.. . ......+..+.. ..++.
T Consensus 227 ~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (357)
T PHA03209 227 VLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYAS 306 (357)
T ss_pred ecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcc
Confidence 99999999999999999999999963 211 0 011111111100 00110
Q ss_pred ------------CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhh
Q 001548 550 ------------SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1056)
Q Consensus 550 ------------~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~ 587 (1056)
.....+..+.+||.+||+.||.+|||+.|+|+||||..
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 307 LERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred cCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 01133456678999999999999999999999999975
No 100
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.96 E-value=2.3e-29 Score=285.67 Aligned_cols=199 Identities=18% Similarity=0.172 Sum_probs=152.9
Q ss_pred cCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhh
Q 001548 268 SNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT 347 (1056)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs 347 (1056)
...||||+.+......+... ..+|+|++|++|.+++.... .++..+++.++.||+.||.|||+
T Consensus 52 ~~~hp~iv~~~~~~~~~~~~----------------~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~LH~ 114 (316)
T cd05619 52 AWEHPFLTHLYCTFQTKENL----------------FFVMEYLNGGDLMFHIQSCH-KFDLPRATFYAAEIICGLQFLHS 114 (316)
T ss_pred ccCCCcCcceEEEEEeCCEE----------------EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence 45899999876554322211 14899999999999997653 46777899999999999999999
Q ss_pred cCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccc
Q 001548 348 QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWW 427 (1056)
Q Consensus 348 ~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 427 (1056)
+||+||||||+|||++.++.+||+|||+++......
T Consensus 115 ~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-------------------------------------------- 150 (316)
T cd05619 115 KGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD-------------------------------------------- 150 (316)
T ss_pred CCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC--------------------------------------------
Confidence 999999999999999999999999999886432000
Q ss_pred cccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCC
Q 001548 428 SLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG 507 (1056)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~ 507 (1056)
.......||+.|+|||++.+.
T Consensus 151 -----------------------------------------------------------~~~~~~~gt~~y~aPE~~~~~ 171 (316)
T cd05619 151 -----------------------------------------------------------AKTCTFCGTPDYIAPEILLGQ 171 (316)
T ss_pred -----------------------------------------------------------CceeeecCCccccCHHHHcCC
Confidence 000145689999999999999
Q ss_pred CCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHH-HHhhhh
Q 001548 508 VCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTR-EILQSE 583 (1056)
Q Consensus 508 ~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~-eil~~~ 583 (1056)
.++.++|||||||++|||++| |...... .....+.... +......+.++.+|+.+||++||.+||++. ++++||
T Consensus 172 ~~~~~~DvwslG~il~el~~G~~pf~~~~~~-~~~~~i~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~ 249 (316)
T cd05619 172 KYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE-ELFQSIRMDN-PCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHP 249 (316)
T ss_pred CCCchhhhhhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhCC-CCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCc
Confidence 999999999999999999986 3332222 2222222211 111223577889999999999999999996 999999
Q ss_pred hhhhh
Q 001548 584 VTNEF 588 (1056)
Q Consensus 584 ~~~~~ 588 (1056)
||...
T Consensus 250 ~~~~~ 254 (316)
T cd05619 250 FFREI 254 (316)
T ss_pred ccCCC
Confidence 99875
No 101
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.96 E-value=1.9e-29 Score=288.29 Aligned_cols=203 Identities=17% Similarity=0.182 Sum_probs=156.7
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+.......... ..+|||++|++|.+++...+ .+++..++.++.||+.||
T Consensus 52 ~~~l~~~~h~~iv~~~~~~~~~~~~----------------~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l 114 (333)
T cd05600 52 RDILTTTKSEWLVKLLYAFQDDEYL----------------YLAMEYVPGGDFRTLLNNLG-VLSEDHARFYMAEMFEAV 114 (333)
T ss_pred HHHHHhCCCCCCccEEEEEEcCCEE----------------EEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHH
Confidence 3456677899999876553322111 14899999999999997655 466779999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 115 ~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~----------------------------------------- 153 (333)
T cd05600 115 DALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT----------------------------------------- 153 (333)
T ss_pred HHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc-----------------------------------------
Confidence 999999999999999999999999999999998865330
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.....+||+.|+|||
T Consensus 154 -----------------------------------------------------------------~~~~~~gt~~y~aPE 168 (333)
T cd05600 154 -----------------------------------------------------------------YANSVVGSPDYMAPE 168 (333)
T ss_pred -----------------------------------------------------------------ccCCcccCccccChh
Confidence 001457899999999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhh--ccCCCCCCC----CCCChhHHHHHHhccccCCCCC
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDL--RDRILPPSF----LSENPKEAGFCLWQLHPEPLSR 573 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~--~~~~lp~~~----~~~~~~~~~li~~lL~~dP~~R 573 (1056)
++.+..++.++|||||||+||||++| |............. ......+.. ...++.+.+|+.+||..+|.+|
T Consensus 169 ~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr 248 (333)
T cd05600 169 VLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRF 248 (333)
T ss_pred HhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhc
Confidence 99999999999999999999999986 33322221111111 111111111 2457889999999999999999
Q ss_pred CCHHHHhhhhhhhhh
Q 001548 574 PTTREILQSEVTNEF 588 (1056)
Q Consensus 574 pt~~eil~~~~~~~~ 588 (1056)
|++.++++||||...
T Consensus 249 ~s~~~ll~h~~~~~~ 263 (333)
T cd05600 249 GSLEDIKNHPFFKEV 263 (333)
T ss_pred CCHHHHHhCcccCCC
Confidence 999999999999875
No 102
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.96 E-value=2.4e-27 Score=281.30 Aligned_cols=252 Identities=25% Similarity=0.373 Sum_probs=217.3
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEE
Q 001548 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLW 856 (1056)
Q Consensus 777 ~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lW 856 (1056)
.|...|.++.|+++|+.+++++.|+.+++|+..+... .......+|...|++++|+|+ +.++++|+.|++|+||
T Consensus 157 ~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~-----~~~~~l~~h~~~v~~~~fs~d-~~~l~s~s~D~tiriw 230 (456)
T KOG0266|consen 157 HECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKS-----NLLRELSGHTRGVSDVAFSPD-GSYLLSGSDDKTLRIW 230 (456)
T ss_pred cccCceEEEEEcCCCCeEEEccCCCcEEEeecccccc-----hhhccccccccceeeeEECCC-CcEEEEecCCceEEEe
Confidence 4478899999999999999999999999999854210 122222689999999999999 8899999999999999
Q ss_pred Ec-CCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEEEeC
Q 001548 857 DA-CTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSA 934 (1056)
Q Consensus 857 D~-~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~lasGs~ 934 (1056)
|+ ..+.+++++++|...|++++|+| .++++++|+.|++|+|||+++++++..+. |...|++++|++++. +|++++.
T Consensus 231 d~~~~~~~~~~l~gH~~~v~~~~f~p-~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~-~l~s~s~ 308 (456)
T KOG0266|consen 231 DLKDDGRNLKTLKGHSTYVTSVAFSP-DGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGN-LLVSASY 308 (456)
T ss_pred eccCCCeEEEEecCCCCceEEEEecC-CCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCC-EEEEcCC
Confidence 99 55689999999999999999999 67999999999999999999999999997 667899999999997 8888999
Q ss_pred CCeEEEEEcCCCCc-ceEEecCCCCC--eEEEEEc-CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEE
Q 001548 935 DYRTYCYDLRNARA-PWCVLAGHEKA--VSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKV 1010 (1056)
Q Consensus 935 Dg~V~lwDlr~~~~-~~~~l~gH~~~--V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv 1010 (1056)
|+.|++||+.++.. +...+.++..+ ++++.|+ ++.+|++++.|+++++||+. .+.++.++.+|.+.+.
T Consensus 309 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~--------~~~~~~~~~~~~~~~~ 380 (456)
T KOG0266|consen 309 DGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLR--------SGKSVGTYTGHSNLVR 380 (456)
T ss_pred CccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEcc--------CCcceeeecccCCcce
Confidence 99999999999874 25667777666 9999998 77889999999999999998 5678899999998852
Q ss_pred EEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCCeEE
Q 001548 1011 GICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWGCLL 1052 (1056)
Q Consensus 1011 ~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~~~~ 1052 (1056)
++- ....++.+.++++++.|+.|.+|+++.+..+
T Consensus 381 ~~~--------~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~ 414 (456)
T KOG0266|consen 381 CIF--------SPTLSTGGKLIYSGSEDGSVYVWDSSSGGIL 414 (456)
T ss_pred eEe--------cccccCCCCeEEEEeCCceEEEEeCCccchh
Confidence 322 1124789999999999999999999976543
No 103
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=99.96 E-value=3.3e-27 Score=258.40 Aligned_cols=275 Identities=17% Similarity=0.232 Sum_probs=227.8
Q ss_pred ceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCC
Q 001548 733 FLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALF 812 (1056)
Q Consensus 733 v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~ 812 (1056)
|.++.+. .+++...+|++||.+++|+... .... .|..|.++|.++.|+..|.+|++++.|+++.+||..+.
T Consensus 238 VT~L~Wn--~~G~~LatG~~~G~~riw~~~G-~l~~-----tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g- 308 (524)
T KOG0273|consen 238 VTSLDWN--NDGTLLATGSEDGEARIWNKDG-NLIS-----TLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTG- 308 (524)
T ss_pred cceEEec--CCCCeEEEeecCcEEEEEecCc-hhhh-----hhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCc-
Confidence 4555541 1244455999999999998543 2222 35589999999999999999999999999999998642
Q ss_pred CCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeC
Q 001548 813 NDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSD 892 (1056)
Q Consensus 813 ~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~ 892 (1056)
.....+.-|...-.+|.|-. ...|++++.||.|+++.+....++.+|.+|.++|+++.|+| .+.+|+|||+
T Consensus 309 ------~~~q~f~~~s~~~lDVdW~~--~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~-tg~LLaS~Sd 379 (524)
T KOG0273|consen 309 ------TVKQQFEFHSAPALDVDWQS--NDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNP-TGSLLASCSD 379 (524)
T ss_pred ------eEEEeeeeccCCccceEEec--CceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECC-CCceEEEecC
Confidence 12222333555568899976 56899999999999999999999999999999999999999 8999999999
Q ss_pred CCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCC--------cEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEE
Q 001548 893 DCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSS--------HLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYV 963 (1056)
Q Consensus 893 Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~--------~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l 963 (1056)
|+|++||......+...+. |...|..+.|+|+++ ..+++++.|++|++||+..+.+ +++|..|+.+|++|
T Consensus 380 D~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~-i~~f~kH~~pVysv 458 (524)
T KOG0273|consen 380 DGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVP-IHTLMKHQEPVYSV 458 (524)
T ss_pred CCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCce-eEeeccCCCceEEE
Confidence 9999999999888887776 667899999999873 4799999999999999998875 88999999999999
Q ss_pred EEc-CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEE
Q 001548 964 KFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTL 1042 (1056)
Q Consensus 964 ~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~ 1042 (1056)
+|+ ++.+++||+.||.|.+|+++ +++.++++.|.. .|..+ +|+.+|..|..+-.|+.++
T Consensus 459 afS~~g~ylAsGs~dg~V~iws~~--------~~~l~~s~~~~~-~Ifel-----------~Wn~~G~kl~~~~sd~~vc 518 (524)
T KOG0273|consen 459 AFSPNGRYLASGSLDGCVHIWSTK--------TGKLVKSYQGTG-GIFEL-----------CWNAAGDKLGACASDGSVC 518 (524)
T ss_pred EecCCCcEEEecCCCCeeEecccc--------chheeEeecCCC-eEEEE-----------EEcCCCCEEEEEecCCCce
Confidence 999 67889999999999999998 566677766542 24444 4999999988888999998
Q ss_pred EEeC
Q 001548 1043 SFRT 1046 (1056)
Q Consensus 1043 iW~v 1046 (1056)
+-|.
T Consensus 519 vldl 522 (524)
T KOG0273|consen 519 VLDL 522 (524)
T ss_pred EEEe
Confidence 8764
No 104
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.96 E-value=3.3e-29 Score=279.48 Aligned_cols=204 Identities=16% Similarity=0.168 Sum_probs=151.0
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..+++...||||+.+......+.. -..+|||++|+.|..+.+. ...+++..++.++.||+.||
T Consensus 51 ~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~L 113 (287)
T cd07848 51 LKMLRTLKQENIVELKEAFRRRGK----------------LYLVFEYVEKNMLELLEEM-PNGVPPEKVRSYIYQLIKAI 113 (287)
T ss_pred HHHHHhCCCccccchhhhEecCCE----------------EEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHH
Confidence 456788899999976554322111 1248999999877655443 34577779999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 114 ~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--------------------------------------- 154 (287)
T cd07848 114 HWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS--------------------------------------- 154 (287)
T ss_pred HHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccc---------------------------------------
Confidence 99999999999999999999999999999999887643100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
........||+.|+|||
T Consensus 155 ---------------------------------------------------------------~~~~~~~~~~~~y~aPE 171 (287)
T cd07848 155 ---------------------------------------------------------------NANYTEYVATRWYRSPE 171 (287)
T ss_pred ---------------------------------------------------------------cccccccccccccCCcH
Confidence 00011456889999999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHH--hhcc------------------CCCCCC---------
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMS--DLRD------------------RILPPS--------- 550 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~--~~~~------------------~~lp~~--------- 550 (1056)
++.+..++.++|||||||++|||++| |........... .+.. ...|..
T Consensus 172 ~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (287)
T cd07848 172 LLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERR 251 (287)
T ss_pred HHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHh
Confidence 99998899999999999999999986 433222211111 1000 001100
Q ss_pred -CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 551 -FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 551 -~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
....++.+.+||.+||++||.+|||+.++|+||||
T Consensus 252 ~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 252 YLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred hhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 11246678999999999999999999999999997
No 105
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.96 E-value=1.7e-29 Score=287.51 Aligned_cols=202 Identities=18% Similarity=0.145 Sum_probs=155.2
Q ss_pred hhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Q 001548 265 MVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDY 344 (1056)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~y 344 (1056)
++....||||+.+......+... ..+|+|++|++|.+++...+ .+++..++.++.||+.||+|
T Consensus 49 ~~~~l~hp~iv~~~~~~~~~~~~----------------~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~ 111 (323)
T cd05575 49 LLKNVKHPFLVGLHYSFQTADKL----------------YFVLDYVNGGELFFHLQRER-SFPEPRARFYAAEIASALGY 111 (323)
T ss_pred HHhhCCCCCCCCeeEEEEeCCEE----------------EEEEcCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Confidence 45677899999865543322111 24899999999999997654 46777899999999999999
Q ss_pred hhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccccc
Q 001548 345 HHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFS 424 (1056)
Q Consensus 345 lHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 424 (1056)
||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 112 lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~------------------------------------------ 149 (323)
T cd05575 112 LHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH------------------------------------------ 149 (323)
T ss_pred HHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC------------------------------------------
Confidence 99999999999999999999999999999988643200
Q ss_pred ccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccc
Q 001548 425 RWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEEL 504 (1056)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l 504 (1056)
.......+||+.|+|||++
T Consensus 150 -------------------------------------------------------------~~~~~~~~gt~~y~aPE~~ 168 (323)
T cd05575 150 -------------------------------------------------------------SKTTSTFCGTPEYLAPEVL 168 (323)
T ss_pred -------------------------------------------------------------CCccccccCChhhcChhhh
Confidence 0001145789999999999
Q ss_pred cCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCH----H
Q 001548 505 SGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT----R 577 (1056)
Q Consensus 505 ~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~----~ 577 (1056)
.+..++.++|||||||+||||+++ |............+... + ......++.+.+|+.+||++||.+||++ .
T Consensus 169 ~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~-~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (323)
T cd05575 169 RKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKP-L-RLKPNISVSARHLLEGLLQKDRTKRLGAKDDFL 246 (323)
T ss_pred cCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC-C-CCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHH
Confidence 999999999999999999999986 43322222222222221 1 1223458889999999999999999998 6
Q ss_pred HHhhhhhhhhh
Q 001548 578 EILQSEVTNEF 588 (1056)
Q Consensus 578 eil~~~~~~~~ 588 (1056)
++++||||...
T Consensus 247 ~il~~~~~~~~ 257 (323)
T cd05575 247 EIKNHVFFSSI 257 (323)
T ss_pred HHHcCCCcCCC
Confidence 99999999763
No 106
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.96 E-value=2.1e-29 Score=293.53 Aligned_cols=253 Identities=13% Similarity=0.099 Sum_probs=160.2
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+.......... ..+||||+||+|.+++...+ .+++..++.++.||+.||
T Consensus 52 ~~il~~l~h~~iv~l~~~~~~~~~~----------------~lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL 114 (381)
T cd05626 52 RDILAEADNEWVVKLYYSFQDKDNL----------------YFVMDYIPGGDMMSLLIRME-VFPEVLARFYIAELTLAI 114 (381)
T ss_pred HHHHHhcCCCCeeeeEEEEecCCEE----------------EEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHH
Confidence 4567888999999876554322111 14899999999999997755 466778999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
+|||++||+||||||+||||+.++.+||+|||+++.+.......... .. ..+....
T Consensus 115 ~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~-----------~~------------~~~~~~~- 170 (381)
T cd05626 115 ESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQ-----------KG------------SHIRQDS- 170 (381)
T ss_pred HHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccccc-----------cc------------ccccccc-
Confidence 99999999999999999999999999999999987643111000000 00 0000000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
...+..+..... ..++ ........ ..............+||+.|+|||
T Consensus 171 --~~~~~~~~~~~~----------~~~~-----~~~~~~~~---------------~~~~~~~~~~~~~~~gt~~Y~aPE 218 (381)
T cd05626 171 --MEPSDLWDDVSN----------CRCG-----DRLKTLEQ---------------RATKQHQRCLAHSLVGTPNYIAPE 218 (381)
T ss_pred --cCcccccccccc----------cccc-----cccchhhc---------------cccccccccccccccCCccccCHH
Confidence 000000000000 0000 00000000 000000000112568999999999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhc--cCCCCCCCCCCChhHHHHHHhcc--ccCCCCCCC
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLR--DRILPPSFLSENPKEAGFCLWQL--HPEPLSRPT 575 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~--~~~lp~~~~~~~~~~~~li~~lL--~~dP~~Rpt 575 (1056)
++.+..++.++|||||||+||||++| |............+. .....+.....++++.+|+.+|| .++|..||+
T Consensus 219 ~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~ 298 (381)
T cd05626 219 VLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNG 298 (381)
T ss_pred HHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCC
Confidence 99998999999999999999999987 433333222222222 22222334457899999999965 455566999
Q ss_pred HHHHhhhhhhhhh
Q 001548 576 TREILQSEVTNEF 588 (1056)
Q Consensus 576 ~~eil~~~~~~~~ 588 (1056)
+.+|+.||||...
T Consensus 299 ~~~~l~hp~f~~~ 311 (381)
T cd05626 299 ADDIKAHPFFSEV 311 (381)
T ss_pred HHHHhcCcccCCC
Confidence 9999999999764
No 107
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=99.96 E-value=2.4e-29 Score=270.84 Aligned_cols=249 Identities=20% Similarity=0.317 Sum_probs=212.8
Q ss_pred ccccccccccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCc
Q 001548 723 NDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKK 802 (1056)
Q Consensus 723 ~~~l~gh~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg~ 802 (1056)
..++..|+..|.++.+ ..+..-.++|..||.||+|+..-..++ .+ ..+|...|.+++|+|+...|+||+.|++
T Consensus 131 EtilQaHDs~Vr~m~w--s~~g~wmiSgD~gG~iKyWqpnmnnVk-~~----~ahh~eaIRdlafSpnDskF~t~SdDg~ 203 (464)
T KOG0284|consen 131 ETILQAHDSPVRTMKW--SHNGTWMISGDKGGMIKYWQPNMNNVK-II----QAHHAEAIRDLAFSPNDSKFLTCSDDGT 203 (464)
T ss_pred HHHhhhhcccceeEEE--ccCCCEEEEcCCCceEEecccchhhhH-Hh----hHhhhhhhheeccCCCCceeEEecCCCe
Confidence 4567778999988877 334455568889999999986532221 11 2266799999999999999999999999
Q ss_pred EEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecC
Q 001548 803 IKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQV 882 (1056)
Q Consensus 803 I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~ 882 (1056)
|+|||... .....+..+|.-.|.|+.|+|. ..+||+||.|..|++||.+++.|+.++.+|...|..+.|++
T Consensus 204 ikiWdf~~-------~kee~vL~GHgwdVksvdWHP~-kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~- 274 (464)
T KOG0284|consen 204 IKIWDFRM-------PKEERVLRGHGWDVKSVDWHPT-KGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNP- 274 (464)
T ss_pred EEEEeccC-------CchhheeccCCCCcceeccCCc-cceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcC-
Confidence 99999863 2333445799999999999999 88999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeE
Q 001548 883 HPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVS 961 (1056)
Q Consensus 883 d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~ 961 (1056)
++++|+|+|.|..++++|+|+.+.+.++. |...|+++.|+|-...+|++|+.||.|..|.+...+.....-.+|...|+
T Consensus 275 n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~AHd~~iw 354 (464)
T KOG0284|consen 275 NGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGEIPPAHDGEIW 354 (464)
T ss_pred CCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCceEEEeccccccccCCCccccccee
Confidence 88999999999999999999888888887 78899999999998889999999999999999855543444578999999
Q ss_pred EEEEcC-CCEEEEEECCCeEEEEECCC
Q 001548 962 YVKFLD-SGTLVTASTDNKLKLWDLKR 987 (1056)
Q Consensus 962 ~l~fs~-~~~L~SgS~Dg~IkiWdl~~ 987 (1056)
+++|+| +.+|+|||.|.++++|.-..
T Consensus 355 sl~~hPlGhil~tgsnd~t~rfw~r~r 381 (464)
T KOG0284|consen 355 SLAYHPLGHILATGSNDRTVRFWTRNR 381 (464)
T ss_pred eeeccccceeEeecCCCcceeeeccCC
Confidence 999996 55688999999999998653
No 108
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.96 E-value=4e-29 Score=288.09 Aligned_cols=251 Identities=18% Similarity=0.132 Sum_probs=170.5
Q ss_pred CchhHHHhhhcc--ccceeeeCCCC-CccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCC
Q 001548 210 GFSEFFVKTTLK--GKGIVCRGPPL-NAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGS 286 (1056)
Q Consensus 210 ~~~~~~~k~~~~--g~Gvv~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1056)
.+.+|-+.+.++ |+|.||++... ++..+ ..+.............-.....++....|+||+.+......+..
T Consensus 72 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~v-----aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 146 (353)
T PLN00034 72 SLSELERVNRIGSGAGGTVYKVIHRPTGRLY-----ALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGE 146 (353)
T ss_pred CHHHHhhhhhccCCCCeEEEEEEECCCCCEE-----EEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCe
Confidence 455555544444 78999999752 11111 11111110011111112233456778899999986655332211
Q ss_pred CCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCC
Q 001548 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366 (1056)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~ 366 (1056)
...+|||++|++|.... ...+..+..+++||+.||.|||++||+||||||+|||++.++
T Consensus 147 ----------------~~lv~e~~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~ 205 (353)
T PLN00034 147 ----------------IQVLLEFMDGGSLEGTH-----IADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAK 205 (353)
T ss_pred ----------------EEEEEecCCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC
Confidence 12489999999997532 345667889999999999999999999999999999999999
Q ss_pred cEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccc
Q 001548 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1056)
Q Consensus 367 ~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 446 (1056)
.+||+|||+++.+....
T Consensus 206 ~~kL~DfG~~~~~~~~~--------------------------------------------------------------- 222 (353)
T PLN00034 206 NVKIADFGVSRILAQTM--------------------------------------------------------------- 222 (353)
T ss_pred CEEEcccccceeccccc---------------------------------------------------------------
Confidence 99999999886643100
Q ss_pred cccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccC-----CCCCccchhHHHHHH
Q 001548 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-----GVCTTSSNIYSLGVL 521 (1056)
Q Consensus 447 ~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-----~~~t~~sDIwSLGvl 521 (1056)
......+||..|+|||++.. ...+.++|||||||+
T Consensus 223 ----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvi 262 (353)
T PLN00034 223 ----------------------------------------DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVS 262 (353)
T ss_pred ----------------------------------------ccccccccCccccCccccccccccCcCCCcchhHHHHHHH
Confidence 00013568999999999853 234679999999999
Q ss_pred HHHHhCC---CCcH--HHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001548 522 FFELFGR---FDSE--RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1056)
Q Consensus 522 L~eLlt~---f~~~--~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~ 589 (1056)
||||+++ |... ......+..+.....+......++.+.+||.+||+.||.+||++.|||+||||....
T Consensus 263 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~ 335 (353)
T PLN00034 263 ILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQ 335 (353)
T ss_pred HHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence 9999986 3211 122222222322333344456688899999999999999999999999999998753
No 109
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.96 E-value=2e-29 Score=287.69 Aligned_cols=200 Identities=20% Similarity=0.182 Sum_probs=152.5
Q ss_pred cCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhh
Q 001548 268 SNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT 347 (1056)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs 347 (1056)
...||||+.+......+... ..+|||++|++|..++...+ .+++..++.++.||+.||.|||+
T Consensus 52 ~~~hp~iv~~~~~~~~~~~~----------------~lv~E~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~~l~~lH~ 114 (329)
T cd05618 52 ASNHPFLVGLHSCFQTESRL----------------FFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHE 114 (329)
T ss_pred cCCCCcCCceeeEEEeCCEE----------------EEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 34799999876654332221 14899999999999987654 46777999999999999999999
Q ss_pred cCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccc
Q 001548 348 QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWW 427 (1056)
Q Consensus 348 ~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 427 (1056)
+||+||||||+|||++.++.+||+|||+++......
T Consensus 115 ~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~-------------------------------------------- 150 (329)
T cd05618 115 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-------------------------------------------- 150 (329)
T ss_pred CCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC--------------------------------------------
Confidence 999999999999999999999999999886532000
Q ss_pred cccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCC
Q 001548 428 SLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG 507 (1056)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~ 507 (1056)
......+||+.|+|||++.+.
T Consensus 151 -----------------------------------------------------------~~~~~~~gt~~y~aPE~~~~~ 171 (329)
T cd05618 151 -----------------------------------------------------------DTTSTFCGTPNYIAPEILRGE 171 (329)
T ss_pred -----------------------------------------------------------CccccccCCccccCHHHHcCC
Confidence 001145789999999999999
Q ss_pred CCCccchhHHHHHHHHHHhCCCCcHH-----------HHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCC-
Q 001548 508 VCTTSSNIYSLGVLFFELFGRFDSER-----------ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT- 575 (1056)
Q Consensus 508 ~~t~~sDIwSLGvlL~eLlt~f~~~~-----------~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt- 575 (1056)
.++.++|||||||++|||++|..++. ........+.... .......++.+.+||.+||++||.+||+
T Consensus 172 ~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 172 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-IRIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC-CCCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 99999999999999999998733321 0111111111111 1222355788999999999999999998
Q ss_pred -----HHHHhhhhhhhhh
Q 001548 576 -----TREILQSEVTNEF 588 (1056)
Q Consensus 576 -----~~eil~~~~~~~~ 588 (1056)
+.++++||||...
T Consensus 251 ~~~~~~~~i~~hp~f~~~ 268 (329)
T cd05618 251 HPQTGFADIQGHPFFRNV 268 (329)
T ss_pred CCCCCHHHHhcCCCCCCC
Confidence 5899999999764
No 110
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=2.1e-29 Score=298.28 Aligned_cols=245 Identities=17% Similarity=0.148 Sum_probs=169.7
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCc
Q 001548 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1056)
Q Consensus 214 ~~~k~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1056)
|.+.+.+ +++|.||++...+. .+.++.+.... ........+++...||||+.+......+....
T Consensus 171 y~i~~~Lg~G~~G~Vy~a~~~~~-------~~~vavK~~~~----~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~--- 236 (461)
T PHA03211 171 FAIHRALTPGSEGCVFESSHPDY-------PQRVVVKAGWY----ASSVHEARLLRRLSHPAVLALLDVRVVGGLTC--- 236 (461)
T ss_pred eEEEEEEccCCCeEEEEEEECCC-------CCEEEEecccc----cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEE---
Confidence 4444444 47899999986321 11111111111 11122345788889999998776543322211
Q ss_pred CCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEe
Q 001548 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1056)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~ 371 (1056)
.+|+++. ++|.+++......++...++.|+.||+.||.|||++||+||||||+||||+.++.+||+
T Consensus 237 -------------lv~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~ 302 (461)
T PHA03211 237 -------------LVLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLG 302 (461)
T ss_pred -------------EEEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEc
Confidence 2677774 68999997766678888999999999999999999999999999999999999999999
Q ss_pred CcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCC
Q 001548 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1056)
Q Consensus 372 Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~ 451 (1056)
|||+++.......
T Consensus 303 DFGla~~~~~~~~------------------------------------------------------------------- 315 (461)
T PHA03211 303 DFGAACFARGSWS------------------------------------------------------------------- 315 (461)
T ss_pred ccCCceecccccc-------------------------------------------------------------------
Confidence 9999876431000
Q ss_pred CCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCC---
Q 001548 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR--- 528 (1056)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~--- 528 (1056)
........||+.|+|||++.+..++.++|||||||+||||+++
T Consensus 316 ----------------------------------~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~ 361 (461)
T PHA03211 316 ----------------------------------TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTAS 361 (461)
T ss_pred ----------------------------------cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCC
Confidence 0000135689999999999999999999999999999999853
Q ss_pred -CCc---------HHHHHHHHHhhcc--CCCC----------------------------CCCCCCChhHHHHHHhcccc
Q 001548 529 -FDS---------ERALAAAMSDLRD--RILP----------------------------PSFLSENPKEAGFCLWQLHP 568 (1056)
Q Consensus 529 -f~~---------~~~~~~~~~~~~~--~~lp----------------------------~~~~~~~~~~~~li~~lL~~ 568 (1056)
|.. .......+..... ..++ ..+...++.+.+||.+||..
T Consensus 362 lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~ 441 (461)
T PHA03211 362 LFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTF 441 (461)
T ss_pred cccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHccc
Confidence 211 1111112111110 0011 01113456788999999999
Q ss_pred CCCCCCCHHHHhhhhhhhh
Q 001548 569 EPLSRPTTREILQSEVTNE 587 (1056)
Q Consensus 569 dP~~Rpt~~eil~~~~~~~ 587 (1056)
||.+|||+.|+|+||||..
T Consensus 442 DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 442 DGARRPSAAELLRLPLFQS 460 (461)
T ss_pred ChhhCcCHHHHhhCcccCC
Confidence 9999999999999999964
No 111
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.96 E-value=4.4e-29 Score=278.11 Aligned_cols=207 Identities=16% Similarity=0.181 Sum_probs=156.0
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIV 339 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~QIl 339 (1056)
..++....||||+.+......+... ..+|+|++|++|.+++.. ....+++..++.++.||+
T Consensus 44 ~~il~~l~~~~i~~~~~~~~~~~~~----------------~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~ 107 (280)
T cd05608 44 KRILAKVHSRFIVSLAYAFQTKTDL----------------CLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQII 107 (280)
T ss_pred HHHHHhCCCCcEeeeeEEEcCCCeE----------------EEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHH
Confidence 4567788999998765543322111 248999999999988843 334578889999999999
Q ss_pred HHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccc
Q 001548 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (1056)
Q Consensus 340 ~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 419 (1056)
.||+|||++||+||||||+||+++.++.+|++|||+++......
T Consensus 108 ~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~------------------------------------ 151 (280)
T cd05608 108 SGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ------------------------------------ 151 (280)
T ss_pred HHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC------------------------------------
Confidence 99999999999999999999999999999999999886543100
Q ss_pred cccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCcc
Q 001548 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (1056)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 499 (1056)
.......||+.|+
T Consensus 152 -------------------------------------------------------------------~~~~~~~g~~~y~ 164 (280)
T cd05608 152 -------------------------------------------------------------------SKTKGYAGTPGFM 164 (280)
T ss_pred -------------------------------------------------------------------ccccccCCCcCcc
Confidence 0001346888999
Q ss_pred CcccccCCCCCccchhHHHHHHHHHHhCC---CCcHH---HHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCC
Q 001548 500 SPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER---ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (1056)
Q Consensus 500 APE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~---~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~R 573 (1056)
|||++.+..++.++|||||||++|||+++ |.... ........+.... .......++.+.+|+.+||+.||.+|
T Consensus 165 aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R 243 (280)
T cd05608 165 APELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDS-VTYPDKFSPASKSFCEALLAKDPEKR 243 (280)
T ss_pred CHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccC-CCCcccCCHHHHHHHHHHhcCCHHHh
Confidence 99999999999999999999999999986 33221 1111111111111 11223467889999999999999999
Q ss_pred C-----CHHHHhhhhhhhhhh
Q 001548 574 P-----TTREILQSEVTNEFQ 589 (1056)
Q Consensus 574 p-----t~~eil~~~~~~~~~ 589 (1056)
| ++.++++||||+...
T Consensus 244 ~~~~~~~~~~~l~h~~~~~~~ 264 (280)
T cd05608 244 LGFRDGNCDGLRTHPLFRDLN 264 (280)
T ss_pred cCCCCCCHHHHhcChhhhcCC
Confidence 9 889999999998743
No 112
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.96 E-value=1.1e-28 Score=271.34 Aligned_cols=289 Identities=19% Similarity=0.249 Sum_probs=240.9
Q ss_pred cccccccccccceeeecccccCCCCcEEEECCCeEEEEEccC-ceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCC
Q 001548 722 DNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSK-FEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVS 800 (1056)
Q Consensus 722 ~~~~l~gh~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~-~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~D 800 (1056)
-.+++.||+.-|.++.+.. ...--.|+++.|+.+++|++-. .++. + .+.+|..+|.+++|+.+|..|.|+|.|
T Consensus 206 ~~~~~~gH~kgvsai~~fp-~~~hLlLS~gmD~~vklW~vy~~~~~l---r--tf~gH~k~Vrd~~~s~~g~~fLS~sfD 279 (503)
T KOG0282|consen 206 LSHNLSGHTKGVSAIQWFP-KKGHLLLSGGMDGLVKLWNVYDDRRCL---R--TFKGHRKPVRDASFNNCGTSFLSASFD 279 (503)
T ss_pred heeeccCCccccchhhhcc-ceeeEEEecCCCceEEEEEEecCccee---h--hhhcchhhhhhhhccccCCeeeeeecc
Confidence 4578899999999887721 1223456999999999999654 3333 3 366999999999999999999999999
Q ss_pred CcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEe
Q 001548 801 KKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFS 880 (1056)
Q Consensus 801 g~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fs 880 (1056)
+.|++||.+++ . ....+.....++|+.|+|++.+.|++|+.|+.|+.||+++++.+++|..|-+.|+.+.|-
T Consensus 280 ~~lKlwDtETG-------~-~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~ 351 (503)
T KOG0282|consen 280 RFLKLWDTETG-------Q-VLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFV 351 (503)
T ss_pred eeeeeeccccc-------e-EEEEEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEc
Confidence 99999999873 1 122234466789999999977999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCceeEEEe--CCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCc--ceEEecCC
Q 001548 881 QVHPTKLASGSDDCSVKLWNINEKNSLATIK--NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARA--PWCVLAGH 956 (1056)
Q Consensus 881 p~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~--~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~--~~~~l~gH 956 (1056)
+ ++..++|.++|++++||+.+.+..++.+. ......|+..+|.++ ++++=+.|+.|.+|.+...-. ....|.||
T Consensus 352 ~-~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~-~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh 429 (503)
T KOG0282|consen 352 D-EGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGK-WFAAQSMDNYIAIFSTVPPFRLNKKKRFEGH 429 (503)
T ss_pred c-CCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCC-eehhhccCceEEEEecccccccCHhhhhcce
Confidence 9 99999999999999999999988877664 334578999999997 888899999999999764322 23567888
Q ss_pred CCC--eEEEEEc-CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCC-CEE
Q 001548 957 EKA--VSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSD-CWL 1032 (1056)
Q Consensus 957 ~~~--V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g-~~l 1032 (1056)
..+ -..+.|+ ++++|+||+.||.+.+||.+ +.+.+..+.+|...++++. |+|.. ..|
T Consensus 430 ~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwk--------t~kl~~~lkah~~~ci~v~-----------wHP~e~Skv 490 (503)
T KOG0282|consen 430 SVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWK--------TTKLVSKLKAHDQPCIGVD-----------WHPVEPSKV 490 (503)
T ss_pred eccCceeeEEEcCCCCeEEeecCCccEEEeech--------hhhhhhccccCCcceEEEE-----------ecCCCccee
Confidence 654 4567788 78889999999999999998 5678899999998888888 66665 567
Q ss_pred EEEEcCCcEEEEe
Q 001548 1033 LLVCFDFTTLSFR 1045 (1056)
Q Consensus 1033 ~s~s~D~~v~iW~ 1045 (1056)
|||||||.|.+|+
T Consensus 491 at~~w~G~Ikiwd 503 (503)
T KOG0282|consen 491 ATCGWDGLIKIWD 503 (503)
T ss_pred EecccCceeEecC
Confidence 9999999999996
No 113
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.96 E-value=1.4e-26 Score=293.75 Aligned_cols=300 Identities=17% Similarity=0.200 Sum_probs=226.7
Q ss_pred cccccccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeE-E--EeeeecCCCCCEEEEEEcCC-CCEEEEEeCCC
Q 001548 726 LRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGM-L--RTGEFNNSANVICSISFDRD-EDHFAAAGVSK 801 (1056)
Q Consensus 726 l~gh~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~-l--~~~~l~~h~~~V~sv~fspd-g~~latg~~Dg 801 (1056)
+..|.+.|.++++. .+....++++.|+.+++|+.......+. . ....+ .+...|.+++|++. +.+||+++.|+
T Consensus 479 ~~~~~~~V~~i~fs--~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~~las~~~Dg 555 (793)
T PLN00181 479 LLNSSNLVCAIGFD--RDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVEL-ASRSKLSGICWNSYIKSQVASSNFEG 555 (793)
T ss_pred ccCCCCcEEEEEEC--CCCCEEEEEeCCCEEEEEECCcccccccccccceEEe-cccCceeeEEeccCCCCEEEEEeCCC
Confidence 34588889888772 2233345889999999999753211000 0 00112 23467999999874 78999999999
Q ss_pred cEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEec
Q 001548 802 KIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQ 881 (1056)
Q Consensus 802 ~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp 881 (1056)
+|+|||+.+ ........+|...|.+++|+|..+.+|+||+.||+|++||+.++.++..+..| ..|+++.|++
T Consensus 556 ~v~lWd~~~-------~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~ 627 (793)
T PLN00181 556 VVQVWDVAR-------SQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFPS 627 (793)
T ss_pred eEEEEECCC-------CeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEeC
Confidence 999999874 12233445799999999999855889999999999999999999999888754 6899999976
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCc-eeEEEe-CCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCC-----cceEEec
Q 001548 882 VHPTKLASGSDDCSVKLWNINEKN-SLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNAR-----APWCVLA 954 (1056)
Q Consensus 882 ~d~~~laSgs~Dg~V~IWDlr~~~-~~~~~~-~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~-----~~~~~l~ 954 (1056)
.++.+|++|+.|++|++||+++.. ++..+. |...|.+++|. ++. .|++|+.|++|++||++... .++..+.
T Consensus 628 ~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~-~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~ 705 (793)
T PLN00181 628 ESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSS-TLVSSSTDNTLKLWDLSMSISGINETPLHSFM 705 (793)
T ss_pred CCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCC-EEEEEECCCEEEEEeCCCCccccCCcceEEEc
Confidence 589999999999999999999875 454554 67789999997 444 79999999999999998532 3577899
Q ss_pred CCCCCeEEEEEc-CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEec-CCCCcEEEEEec-CCcceeeEEeeCCCCE
Q 001548 955 GHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFS-GHTNEKVGICRL-EHNLFPFTIFNLSDCW 1031 (1056)
Q Consensus 955 gH~~~V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~-gH~~~Vv~ls~~-~~~~~~~~~~s~~g~~ 1031 (1056)
+|...+..+.|+ ++.+|++|+.|++|++|+.... ..+.++. .+...+.++... ....+...+|++++..
T Consensus 706 gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~--------~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~ 777 (793)
T PLN00181 706 GHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFP--------MPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSST 777 (793)
T ss_pred CCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCC--------CceEEEecccCCcccccccCCCCcEEEEEEEcCCCCe
Confidence 999999999999 6788999999999999998632 1222221 122222222111 1223344559999999
Q ss_pred EEEEEcCCcEEEEeC
Q 001548 1032 LLLVCFDFTTLSFRT 1046 (1056)
Q Consensus 1032 l~s~s~D~~v~iW~v 1046 (1056)
|++++.|++|+||++
T Consensus 778 lva~~~dG~I~i~~~ 792 (793)
T PLN00181 778 LVAANSTGNIKILEM 792 (793)
T ss_pred EEEecCCCcEEEEec
Confidence 999999999999986
No 114
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.96 E-value=2e-29 Score=293.80 Aligned_cols=252 Identities=15% Similarity=0.154 Sum_probs=162.7
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+......+... ..+||||+||+|.+++...+ .+++..++.++.||+.||
T Consensus 52 ~~il~~~~h~~iv~~~~~~~~~~~~----------------~lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~al 114 (382)
T cd05625 52 RDILAEADNEWVVRLYYSFQDKDNL----------------YFVMDYIPGGDMMSLLIRMG-IFPEDLARFYIAELTCAV 114 (382)
T ss_pred HHHHHhCCCCcCCeEEEEEEeCCEE----------------EEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHH
Confidence 4467778999999876664432211 14899999999999997654 466778999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
+|||++||+||||||+|||++.++.+||+|||+++.+............+.. + . ....
T Consensus 115 ~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~-~--~-------------------~~~~ 172 (382)
T cd05625 115 ESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHV-R--Q-------------------DSMD 172 (382)
T ss_pred HHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccccccccccccc-c--c-------------------cccc
Confidence 9999999999999999999999999999999998754311100000000000 0 0 0000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
+...++.... ...+.. ... .+.. .............+||+.|+|||
T Consensus 173 -------~~~~~~~~~~-------~~~~~~--~~~-~~~~-----------------~~~~~~~~~~~~~~gt~~Y~aPE 218 (382)
T cd05625 173 -------FSNEWGDPAN-------CRCGDR--LKP-LERR-----------------AARQHQRCLAHSLVGTPNYIAPE 218 (382)
T ss_pred -------cccccccccc-------cccccc--ccc-hhhh-----------------hccccccccccccccCcccCCHH
Confidence 0000000000 000000 000 0000 00000001112568999999999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhc--cCCCCCCCCCCChhHHHHHHhccccCCCCCCC--
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLR--DRILPPSFLSENPKEAGFCLWQLHPEPLSRPT-- 575 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~--~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt-- 575 (1056)
++.+..++.++|||||||+||||++| |.........+..+. .....|.....++.+.+||.+|+ .+|.+|++
T Consensus 219 ~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~ 297 (382)
T cd05625 219 VLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKN 297 (382)
T ss_pred HhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCC
Confidence 99999999999999999999999986 444333333333332 12222334467899999999987 59999997
Q ss_pred -HHHHhhhhhhhhh
Q 001548 576 -TREILQSEVTNEF 588 (1056)
Q Consensus 576 -~~eil~~~~~~~~ 588 (1056)
+.++++||||...
T Consensus 298 ~~~ei~~hp~f~~~ 311 (382)
T cd05625 298 GADEIKAHPFFKTI 311 (382)
T ss_pred CHHHHhcCCCcCCc
Confidence 9999999999764
No 115
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.96 E-value=7.7e-29 Score=283.12 Aligned_cols=204 Identities=18% Similarity=0.177 Sum_probs=154.9
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+......+... ..+|+|++|++|.+++.... .+++..+..++.||+.||
T Consensus 54 ~~~l~~l~h~~iv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l 116 (331)
T cd06649 54 LQVLHECNSPYIVGFYGAFYSDGEI----------------SICMEHMDGGSLDQVLKEAK-RIPEEILGKVSIAVLRGL 116 (331)
T ss_pred HHHHHHCCCCCCCeEEEEEEECCEE----------------EEEeecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHH
Confidence 4567888999999877664432221 13899999999999997654 467778999999999999
Q ss_pred HHhhhc-CcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 343 DYHHTQ-GVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 343 ~ylHs~-gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 117 ~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--------------------------------------- 157 (331)
T cd06649 117 AYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--------------------------------------- 157 (331)
T ss_pred HHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc---------------------------------------
Confidence 999986 6999999999999999999999999988654310
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
......||+.|+||
T Consensus 158 ------------------------------------------------------------------~~~~~~g~~~y~aP 171 (331)
T cd06649 158 ------------------------------------------------------------------MANSFVGTRSYMSP 171 (331)
T ss_pred ------------------------------------------------------------------ccccCCCCcCcCCH
Confidence 00134688899999
Q ss_pred ccccCCCCCccchhHHHHHHHHHHhCC---CCcHH--HHHHHHH------------------------------------
Q 001548 502 EELSGGVCTTSSNIYSLGVLFFELFGR---FDSER--ALAAAMS------------------------------------ 540 (1056)
Q Consensus 502 E~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~--~~~~~~~------------------------------------ 540 (1056)
|++.+..++.++|||||||+||||++| |.... .......
T Consensus 172 E~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (331)
T cd06649 172 ERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAM 251 (331)
T ss_pred hHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccccccccccch
Confidence 999998999999999999999999986 32211 1111100
Q ss_pred -------hhccCCCCCC-CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001548 541 -------DLRDRILPPS-FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1056)
Q Consensus 541 -------~~~~~~lp~~-~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~ 588 (1056)
.+.....|.. ....++++.+|+.+||++||++|||+.+|++||||...
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 307 (331)
T cd06649 252 AIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS 307 (331)
T ss_pred hHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence 0000001111 11356788999999999999999999999999999864
No 116
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.96 E-value=6.2e-29 Score=280.85 Aligned_cols=207 Identities=16% Similarity=0.220 Sum_probs=155.3
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+......+.... .+|+|+++ +|.+++...+..++...++.++.||+.||
T Consensus 55 ~~~l~~l~h~~iv~~~~~~~~~~~~~----------------lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL 117 (309)
T cd07872 55 VSLLKDLKHANIVTLHDIVHTDKSLT----------------LVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGL 117 (309)
T ss_pred HHHHHhCCCCCcceEEEEEeeCCeEE----------------EEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 45677789999998776644332221 37888875 89999877766788889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
+|||++||+||||||+||+++.++.+||+|||+++....+.
T Consensus 118 ~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--------------------------------------- 158 (309)
T cd07872 118 AYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT--------------------------------------- 158 (309)
T ss_pred HHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCc---------------------------------------
Confidence 99999999999999999999999999999999886533100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......+|++|+|||
T Consensus 159 ----------------------------------------------------------------~~~~~~~~~~~y~aPE 174 (309)
T cd07872 159 ----------------------------------------------------------------KTYSNEVVTLWYRPPD 174 (309)
T ss_pred ----------------------------------------------------------------cccccccccccccCCH
Confidence 0001345788999999
Q ss_pred cccC-CCCCccchhHHHHHHHHHHhCC---CCcHHHH---HHHHHhhcc-----------------CCCC--------CC
Q 001548 503 ELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERAL---AAAMSDLRD-----------------RILP--------PS 550 (1056)
Q Consensus 503 ~l~~-~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~---~~~~~~~~~-----------------~~lp--------~~ 550 (1056)
++.+ ..++.++|||||||++|||++| |...... ...+..+.. ...+ ..
T Consensus 175 ~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (309)
T cd07872 175 VLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINH 254 (309)
T ss_pred HHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhh
Confidence 9876 4589999999999999999987 4332211 111111100 0001 11
Q ss_pred CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001548 551 FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1056)
Q Consensus 551 ~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~ 589 (1056)
....++++.+|+.+||+.||.+|||+.|+|+||||....
T Consensus 255 ~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 255 APRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred ccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 234577889999999999999999999999999998754
No 117
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=9.7e-27 Score=239.66 Aligned_cols=291 Identities=17% Similarity=0.194 Sum_probs=233.3
Q ss_pred ccccccccccceeeecccccCCC-C--cEEEECCCeEEEEEccC---ceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEE
Q 001548 723 NDLLRDRENLFLAQQDQEIQNPT-D--RLGAFFDGLCKYARYSK---FEVQGMLRTGEFNNSANVICSISFDRDEDHFAA 796 (1056)
Q Consensus 723 ~~~l~gh~~~v~~~~~~~~~~~~-~--~ls~s~D~~ikiw~~~~---~~~~~~l~~~~l~~h~~~V~sv~fspdg~~lat 796 (1056)
.+.+.||.+.+-.+++ +|. + ..+++.|..+++|+... +.++..+. .+|+..|.+++|+|.|++||+
T Consensus 7 ~~~~~gh~~r~W~~aw----hp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld----~~hkrsVRsvAwsp~g~~La~ 78 (312)
T KOG0645|consen 7 EQKLSGHKDRVWSVAW----HPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLD----DGHKRSVRSVAWSPHGRYLAS 78 (312)
T ss_pred EEeecCCCCcEEEEEe----ccCCceEEEeecCCceEEEEecCCCCcEEEEEecc----ccchheeeeeeecCCCcEEEE
Confidence 4567888887766665 444 3 33778999999999874 44444443 389999999999999999999
Q ss_pred EeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCC---ceEEEEecCCCc
Q 001548 797 AGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTG---QTVSHYIEHEKR 873 (1056)
Q Consensus 797 g~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~---~~v~~~~~H~~~ 873 (1056)
|+.|.++.||.-.. .........-+|...|.|++|+++ +++||+|+.|..|-||.+..+ .++..+++|...
T Consensus 79 aSFD~t~~Iw~k~~-----~efecv~~lEGHEnEVK~Vaws~s-G~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqD 152 (312)
T KOG0645|consen 79 ASFDATVVIWKKED-----GEFECVATLEGHENEVKCVAWSAS-GNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQD 152 (312)
T ss_pred eeccceEEEeecCC-----CceeEEeeeeccccceeEEEEcCC-CCEEEEeeCCCeEEEEEecCCCcEEEEeeecccccc
Confidence 99999999997542 133445666799999999999998 999999999999999999754 478889999999
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCC---CceeEEEe-CCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcc
Q 001548 874 AWSVDFSQVHPTKLASGSDDCSVKLWNINE---KNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAP 949 (1056)
Q Consensus 874 V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~---~~~~~~~~-~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~ 949 (1056)
|-.|.|+| ...+|+|+|.|.+|++|+-.. -.+++++. +...|.+++|+|.|. -|++++.|++|+||-+.+.-
T Consensus 153 VK~V~WHP-t~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~-rl~s~sdD~tv~Iw~~~~~~-- 228 (312)
T KOG0645|consen 153 VKHVIWHP-TEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGS-RLVSCSDDGTVSIWRLYTDL-- 228 (312)
T ss_pred ccEEEEcC-CcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCc-eEEEecCCcceEeeeeccCc--
Confidence 99999999 788999999999999998773 24778886 556899999999996 79999999999999876322
Q ss_pred eEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCC-
Q 001548 950 WCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLS- 1028 (1056)
Q Consensus 950 ~~~l~gH~~~V~~l~fs~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~- 1028 (1056)
-.-|...++.+.|. .+.|+|++.|+.|+|+.-.. .+..|.-......-..|...|.++. |.|.
T Consensus 229 ---~~~~sr~~Y~v~W~-~~~IaS~ggD~~i~lf~~s~-~~d~p~~~l~~~~~~aHe~dVNsV~-----------w~p~~ 292 (312)
T KOG0645|consen 229 ---SGMHSRALYDVPWD-NGVIASGGGDDAIRLFKESD-SPDEPSWNLLAKKEGAHEVDVNSVQ-----------WNPKV 292 (312)
T ss_pred ---chhcccceEeeeec-ccceEeccCCCEEEEEEecC-CCCCchHHHHHhhhcccccccceEE-----------EcCCC
Confidence 23478899999997 78999999999999998662 2222221112223356877887777 7774
Q ss_pred CCEEEEEEcCCcEEEEeCC
Q 001548 1029 DCWLLLVCFDFTTLSFRTS 1047 (1056)
Q Consensus 1029 g~~l~s~s~D~~v~iW~v~ 1047 (1056)
+..|+++|.||.+++|...
T Consensus 293 ~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 293 SNRLASGGDDGIVNFWELE 311 (312)
T ss_pred CCceeecCCCceEEEEEec
Confidence 6788999999999999864
No 118
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.96 E-value=4.9e-29 Score=288.45 Aligned_cols=243 Identities=15% Similarity=0.118 Sum_probs=161.2
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+......+... ..+||||+|++|.+++...+ .+++..++.++.||+.||
T Consensus 52 ~~il~~l~h~~iv~~~~~~~~~~~~----------------~lv~E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL 114 (364)
T cd05599 52 RDILAEADNPWVVKLYYSFQDENYL----------------YLIMEYLPGGDMMTLLMKKD-TFTEEETRFYIAETILAI 114 (364)
T ss_pred HHHHHhCCCCCCcceEEEEEcCCeE----------------EEEECCCCCcHHHHHHHHcC-CCCHHHHHHHHHHHHHHH
Confidence 4567777899999876553322211 24899999999999997765 467779999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
+|||++||+||||||+|||++.++.+||+|||+++.+.......... .......
T Consensus 115 ~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~--------------------------~~~~~~~ 168 (364)
T cd05599 115 DSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYR--------------------------ILSHALP 168 (364)
T ss_pred HHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccccccccccc--------------------------ccccccc
Confidence 99999999999999999999999999999999997654211000000 0000000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
....++.... +....................+||++|+|||
T Consensus 169 ---------------------~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 209 (364)
T cd05599 169 ---------------------SNFLDFISKP------------------MSSKRKAETWKRNRRALAYSTVGTPDYIAPE 209 (364)
T ss_pred ---------------------cccccccccc------------------ccccccccchhhcccccccccccCccccCHH
Confidence 0000000000 0000000000000001112468999999999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhcc--CCCCCCCCCCChhHHHHHHhccccCCCCCCC--
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRD--RILPPSFLSENPKEAGFCLWQLHPEPLSRPT-- 575 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~--~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt-- 575 (1056)
++.+..++.++|||||||+||||++| |............+.. ....+.....++.+.+||.+||. +|.+|++
T Consensus 210 ~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~ 288 (364)
T cd05599 210 VFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNN 288 (364)
T ss_pred HHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCC
Confidence 99999999999999999999999987 3333322222222221 11112233567889999999996 9999998
Q ss_pred -HHHHhhhhhhhhh
Q 001548 576 -TREILQSEVTNEF 588 (1056)
Q Consensus 576 -~~eil~~~~~~~~ 588 (1056)
+.++++||||...
T Consensus 289 ~~~~ll~h~~~~~~ 302 (364)
T cd05599 289 GVNEIKSHPFFKGV 302 (364)
T ss_pred CHHHHhcCCCcCCC
Confidence 9999999999874
No 119
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.96 E-value=4.1e-29 Score=284.45 Aligned_cols=201 Identities=16% Similarity=0.131 Sum_probs=155.0
Q ss_pred hhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Q 001548 265 MVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDY 344 (1056)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~y 344 (1056)
.+....||||+.+......... ...+|||++|++|..++... .+++..++.++.||+.||.|
T Consensus 55 ~~~~l~hp~i~~~~~~~~~~~~----------------~~lv~E~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~al~~ 116 (324)
T cd05589 55 TANSERHPFLVNLFACFQTEDH----------------VCFVMEYAAGGDLMMHIHTD--VFSEPRAVFYAACVVLGLQY 116 (324)
T ss_pred hccccCCCChhceeeEEEcCCE----------------EEEEEcCCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHH
Confidence 3456789999987654332211 12489999999999988643 57888999999999999999
Q ss_pred hhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccccc
Q 001548 345 HHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFS 424 (1056)
Q Consensus 345 lHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 424 (1056)
||++||+||||||+||+++.++.+||+|||+++......
T Consensus 117 lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~----------------------------------------- 155 (324)
T cd05589 117 LHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG----------------------------------------- 155 (324)
T ss_pred HHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCC-----------------------------------------
Confidence 999999999999999999999999999999876422000
Q ss_pred ccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccc
Q 001548 425 RWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEEL 504 (1056)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l 504 (1056)
......+||+.|+|||.+
T Consensus 156 --------------------------------------------------------------~~~~~~~g~~~y~aPE~~ 173 (324)
T cd05589 156 --------------------------------------------------------------DRTSTFCGTPEFLAPEVL 173 (324)
T ss_pred --------------------------------------------------------------CcccccccCccccCHhHh
Confidence 000145789999999999
Q ss_pred cCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCC-----CH
Q 001548 505 SGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP-----TT 576 (1056)
Q Consensus 505 ~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rp-----t~ 576 (1056)
.+..++.++|||||||+||||++| |.................. .....++.+.+|+.+||++||.+|| ++
T Consensus 174 ~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~--~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~ 251 (324)
T cd05589 174 TETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVR--YPRFLSREAISIMRRLLRRNPERRLGSGEKDA 251 (324)
T ss_pred cCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCH
Confidence 999999999999999999999986 4433332222222222222 1234578899999999999999999 69
Q ss_pred HHHhhhhhhhhh
Q 001548 577 REILQSEVTNEF 588 (1056)
Q Consensus 577 ~eil~~~~~~~~ 588 (1056)
.++++||||...
T Consensus 252 ~~l~~~~~f~~~ 263 (324)
T cd05589 252 EDVKKQPFFRDI 263 (324)
T ss_pred HHHhhCCCcCCC
Confidence 999999999764
No 120
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.96 E-value=1.6e-26 Score=255.84 Aligned_cols=298 Identities=17% Similarity=0.215 Sum_probs=235.6
Q ss_pred ccccccccccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCc
Q 001548 723 NDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKK 802 (1056)
Q Consensus 723 ~~~l~gh~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg~ 802 (1056)
.--+.||...+.++.+. ...|-...+++.|+++-|++=.-++-.. .+..|+.-|.|+.|+|||++|||+|.||+
T Consensus 140 vGei~GhSr~ins~~~K-psRPfRi~T~sdDn~v~ffeGPPFKFk~-----s~r~HskFV~~VRysPDG~~Fat~gsDgk 213 (603)
T KOG0318|consen 140 VGEITGHSRRINSVDFK-PSRPFRIATGSDDNTVAFFEGPPFKFKS-----SFREHSKFVNCVRYSPDGSRFATAGSDGK 213 (603)
T ss_pred cceeeccceeEeeeecc-CCCceEEEeccCCCeEEEeeCCCeeeee-----cccccccceeeEEECCCCCeEEEecCCcc
Confidence 34567899999888873 3466677899999999999755444333 34589999999999999999999999999
Q ss_pred EEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEE----------------
Q 001548 803 IKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSH---------------- 866 (1056)
Q Consensus 803 I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~---------------- 866 (1056)
|.|||-.+... .....-..+|++.|.+|+|+|+ +..|+|+|.|.++||||+.+++++++
T Consensus 214 i~iyDGktge~----vg~l~~~~aHkGsIfalsWsPD-s~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lW 288 (603)
T KOG0318|consen 214 IYIYDGKTGEK----VGELEDSDAHKGSIFALSWSPD-STQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLW 288 (603)
T ss_pred EEEEcCCCccE----EEEecCCCCccccEEEEEECCC-CceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEE
Confidence 99999875311 0111113479999999999999 89999999999999999976654433
Q ss_pred ---------------------------EecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcee------------
Q 001548 867 ---------------------------YIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSL------------ 907 (1056)
Q Consensus 867 ---------------------------~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~------------ 907 (1056)
+.+|...|+++..++ ++.+|.||+.||.|.-||+.++.+-
T Consensus 289 qkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~-d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~ 367 (603)
T KOG0318|consen 289 QKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSP-DGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIK 367 (603)
T ss_pred eCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcC-CCCEEEeeccCceEEEEecCCccccccccccccceEE
Confidence 335889999999999 8899999999999999998652110
Q ss_pred -------------------EEE------------------------------------------e---------CCCCeE
Q 001548 908 -------------------ATI------------------------------------------K---------NIANVC 917 (1056)
Q Consensus 908 -------------------~~~------------------------------------------~---------~~~~V~ 917 (1056)
+.+ . ..-...
T Consensus 368 ~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s 447 (603)
T KOG0318|consen 368 GMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESS 447 (603)
T ss_pred EEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccc
Confidence 000 0 001135
Q ss_pred EEEEccCCCcEEEEEeCCCeEEEEEcCCCC-cceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEECCCCCCCCCCC
Q 001548 918 CVQFSAHSSHLLAFGSADYRTYCYDLRNAR-APWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPST 995 (1056)
Q Consensus 918 sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~-~~~~~l~gH~~~V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~ 995 (1056)
+++++|++. .+|.|+.|++|++|.+.... .....+..|..+|++|+|+ ++.+|++|...+.+.+||+.....
T Consensus 448 ~vAv~~~~~-~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~----- 521 (603)
T KOG0318|consen 448 AVAVSPDGS-EVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREV----- 521 (603)
T ss_pred eEEEcCCCC-EEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCce-----
Confidence 888999987 89999999999999998755 3345677899999999999 677899999999999999984321
Q ss_pred CceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCCeE
Q 001548 996 NACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWGCL 1051 (1056)
Q Consensus 996 ~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~~~ 1051 (1056)
....+.=|+..|.+++ |+|+...|+|+|.|..|.||++..+.-
T Consensus 522 --~~~~w~FHtakI~~~a-----------WsP~n~~vATGSlDt~Viiysv~kP~~ 564 (603)
T KOG0318|consen 522 --KTNRWAFHTAKINCVA-----------WSPNNKLVATGSLDTNVIIYSVKKPAK 564 (603)
T ss_pred --ecceeeeeeeeEEEEE-----------eCCCceEEEeccccceEEEEEccChhh
Confidence 1223445999999999 999999999999999999999987654
No 121
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=7.2e-29 Score=278.03 Aligned_cols=252 Identities=18% Similarity=0.186 Sum_probs=173.2
Q ss_pred hHHHhhhcc--ccceeeeCCCCCcccccccccccccccc-ccCCchhHHHHh-hhhhhccC-CCCCCCcccceeeecCCC
Q 001548 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVT-TTMPSDAALKAA-GAMMVASN-ASPKPVGVGTAVVSNGSL 287 (1056)
Q Consensus 213 ~~~~k~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~ 287 (1056)
+|-+-+.++ |.-.|||-..+|--. ....++. ..++-.....-. ..+++..+ .+-+||.+++--+.+.-+
T Consensus 362 ~Yeilk~iG~GGSSkV~kV~~s~~~i------yalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~l 435 (677)
T KOG0596|consen 362 EYEILKQIGSGGSSKVFKVLNSDKQI------YALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYL 435 (677)
T ss_pred hhhHHHhhcCCCcceeeeeecCCCcc------hhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceE
Confidence 677666655 778899988753211 1111111 111111111111 13455555 345566555543332222
Q ss_pred CCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCc
Q 001548 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ 367 (1056)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~ 367 (1056)
....+|...+|..+|++....++...++.|.+|||.+|.++|.+||||.||||.|||+ -.|.
T Consensus 436 -----------------YmvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLl-VkG~ 497 (677)
T KOG0596|consen 436 -----------------YMVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLL-VKGR 497 (677)
T ss_pred -----------------EEEeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEE-Eeee
Confidence 2556788999999999988777755899999999999999999999999999999999 5799
Q ss_pred EEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCccccccccccc
Q 001548 368 VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDIN 447 (1056)
Q Consensus 368 vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 447 (1056)
+||||||+|+.+..+.. + |
T Consensus 498 LKLIDFGIA~aI~~DTT---------------------------------------------------------s---I- 516 (677)
T KOG0596|consen 498 LKLIDFGIANAIQPDTT---------------------------------------------------------S---I- 516 (677)
T ss_pred EEeeeechhcccCcccc---------------------------------------------------------c---e-
Confidence 99999999987652110 0 0
Q ss_pred ccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCC-----------CCCccchhH
Q 001548 448 EVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-----------VCTTSSNIY 516 (1056)
Q Consensus 448 d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-----------~~t~~sDIw 516 (1056)
--.+++||+-|||||.+... .+++++|||
T Consensus 517 ----------------------------------------~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvW 556 (677)
T KOG0596|consen 517 ----------------------------------------VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVW 556 (677)
T ss_pred ----------------------------------------eeccccCcccccCHHHHhhccccccCCCcceeecCccchh
Confidence 00168999999999998652 267899999
Q ss_pred HHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCC--CChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001548 517 SLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLS--ENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1056)
Q Consensus 517 SLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~--~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~ 589 (1056)
|||||||+|+.+ |.........+..+..+...-.|+. .+.++.+++..||..||.+||++.++|+|||++...
T Consensus 557 SLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~~ 634 (677)
T KOG0596|consen 557 SLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQP 634 (677)
T ss_pred hhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCccccccc
Confidence 999999999976 4444444455555555422112221 223378999999999999999999999999998743
No 122
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.96 E-value=1.5e-29 Score=288.78 Aligned_cols=207 Identities=14% Similarity=0.107 Sum_probs=157.9
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||+|+.+......+... ..+|+|++|++|.+++......+++..++.++.||+.||
T Consensus 52 ~~i~~~~~~~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL 115 (330)
T cd05601 52 RDILSISNSPWIPQLQYAFQDKDNL----------------YLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAI 115 (330)
T ss_pred HHHHHhCCCCCCcceeeEEecCCeE----------------EEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 4466777899998765543321111 248999999999999987756788889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 116 ~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~-------------------------------------- 157 (330)
T cd05601 116 HSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM-------------------------------------- 157 (330)
T ss_pred HHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc--------------------------------------
Confidence 999999999999999999999999999999999876431000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......||+.|+|||
T Consensus 158 ----------------------------------------------------------------~~~~~~~gt~~y~aPE 173 (330)
T cd05601 158 ----------------------------------------------------------------VNSKLPVGTPDYIAPE 173 (330)
T ss_pred ----------------------------------------------------------------eeeecccCCccccCHH
Confidence 0001346899999999
Q ss_pred ccc------CCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccC--CCCCCCCCCChhHHHHHHhccccCCC
Q 001548 503 ELS------GGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDR--ILPPSFLSENPKEAGFCLWQLHPEPL 571 (1056)
Q Consensus 503 ~l~------~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~--~lp~~~~~~~~~~~~li~~lL~~dP~ 571 (1056)
++. +..++.++|||||||+||||++| |............+... ...+.....++.+.+|+.+||+ +|.
T Consensus 174 ~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~ 252 (330)
T cd05601 174 VLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQK 252 (330)
T ss_pred HhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-Chh
Confidence 987 45678999999999999999986 43333222222222221 1123334568889999999998 999
Q ss_pred CCCCHHHHhhhhhhhhh
Q 001548 572 SRPTTREILQSEVTNEF 588 (1056)
Q Consensus 572 ~Rpt~~eil~~~~~~~~ 588 (1056)
+||++.+++.||||...
T Consensus 253 ~R~t~~~l~~h~~~~~~ 269 (330)
T cd05601 253 ERLGYEGLCCHPFFSKI 269 (330)
T ss_pred hCCCHHHHhCCCCcCCC
Confidence 99999999999999864
No 123
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.96 E-value=3.4e-29 Score=286.03 Aligned_cols=206 Identities=18% Similarity=0.148 Sum_probs=153.0
Q ss_pred hhhhccC-CCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Q 001548 263 AMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 263 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~g 341 (1056)
..++... .||+|+.+......+.. -..+|+|++|++|.+++...+ .+++.+++.++.||+.|
T Consensus 55 ~~~l~~l~~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~ 117 (332)
T cd05614 55 RNVLEHVRQSPFLVTLHYAFQTEAK----------------LHLILDYVSGGEMFTHLYQRD-NFSEDEVRFYSGEIILA 117 (332)
T ss_pred HHHHHhccCCCCcccEEEEEecCCE----------------EEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHH
Confidence 3445555 58888876544221111 114899999999999997654 46777999999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 118 l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~-------------------------------------- 159 (332)
T cd05614 118 LEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEE-------------------------------------- 159 (332)
T ss_pred HHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccC--------------------------------------
Confidence 999999999999999999999999999999999986543100
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
.......+||+.|+||
T Consensus 160 ----------------------------------------------------------------~~~~~~~~gt~~y~aP 175 (332)
T cd05614 160 ----------------------------------------------------------------KERTYSFCGTIEYMAP 175 (332)
T ss_pred ----------------------------------------------------------------CCccccccCCccccCH
Confidence 0000145789999999
Q ss_pred ccccCC-CCCccchhHHHHHHHHHHhCCCCcHH------HHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCC
Q 001548 502 EELSGG-VCTTSSNIYSLGVLFFELFGRFDSER------ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (1056)
Q Consensus 502 E~l~~~-~~t~~sDIwSLGvlL~eLlt~f~~~~------~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rp 574 (1056)
|++.+. .++.++|||||||+||||++|..++. ........+.. ..++.....++.+.+|+.+||++||++||
T Consensus 176 E~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~R~ 254 (332)
T cd05614 176 EIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK-CDPPFPSFIGPEAQDLLHKLLRKDPKKRL 254 (332)
T ss_pred HHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc-CCCCCCCCCCHHHHHHHHHHcCCCHHHcC
Confidence 999875 47899999999999999998732221 11111111111 11233345688899999999999999999
Q ss_pred -----CHHHHhhhhhhhhh
Q 001548 575 -----TTREILQSEVTNEF 588 (1056)
Q Consensus 575 -----t~~eil~~~~~~~~ 588 (1056)
++.++++||||...
T Consensus 255 ~~~~~~~~~~l~h~~~~~~ 273 (332)
T cd05614 255 GAGPQGASEIKEHPFFKGL 273 (332)
T ss_pred CCCCCCHHHHHcCCCcCCC
Confidence 88899999999764
No 124
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.96 E-value=5.5e-29 Score=283.43 Aligned_cols=178 Identities=19% Similarity=0.205 Sum_probs=142.1
Q ss_pred cccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhccccccc
Q 001548 305 RQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESAS 384 (1056)
Q Consensus 305 ~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~ 384 (1056)
.+|||++|++|.+++...+ .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 78 lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~-- 154 (324)
T cd05587 78 FVMEYVNGGDLMYHIQQVG-KFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG-- 154 (324)
T ss_pred EEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC--
Confidence 4899999999999997665 4667799999999999999999999999999999999999999999999988542200
Q ss_pred CCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCccccccc
Q 001548 385 LDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTN 464 (1056)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~ 464 (1056)
T Consensus 155 -------------------------------------------------------------------------------- 154 (324)
T cd05587 155 -------------------------------------------------------------------------------- 154 (324)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHh
Q 001548 465 AGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSD 541 (1056)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~ 541 (1056)
.......+||+.|+|||++.+..++.++|||||||++|||++| |............
T Consensus 155 ---------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i 213 (324)
T cd05587 155 ---------------------GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSI 213 (324)
T ss_pred ---------------------CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 0001145789999999999999999999999999999999986 4333332222222
Q ss_pred hccCCCCCCCCCCChhHHHHHHhccccCCCCCCCH-----HHHhhhhhhhhh
Q 001548 542 LRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT-----REILQSEVTNEF 588 (1056)
Q Consensus 542 ~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~-----~eil~~~~~~~~ 588 (1056)
.... ++.....++.+.+|+.+||++||.+|+++ .++++||||...
T Consensus 214 ~~~~--~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~ 263 (324)
T cd05587 214 MEHN--VSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRI 263 (324)
T ss_pred HcCC--CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 2222 12223467889999999999999999986 899999999764
No 125
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.96 E-value=1.3e-28 Score=282.58 Aligned_cols=211 Identities=15% Similarity=0.254 Sum_probs=151.9
Q ss_pred hhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Q 001548 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~g 341 (1056)
....+....||||+.+........... .. ......|++ .|++|.++++.. .+++..++.++.||+.|
T Consensus 64 E~~~l~~l~h~~iv~~~~~~~~~~~~~-----~~-----~~~~~~~~~-~~~~l~~~~~~~--~l~~~~~~~i~~qi~~a 130 (343)
T cd07878 64 ELRLLKHMKHENVIGLLDVFTPATSIE-----NF-----NEVYLVTNL-MGADLNNIVKCQ--KLSDEHVQFLIYQLLRG 130 (343)
T ss_pred HHHHHHhcCCCchhhhhhhhccccccc-----cc-----CcEEEEeec-CCCCHHHHHhcC--CCCHHHHHHHHHHHHHH
Confidence 356788889999998665432111111 00 011124444 488999988643 57788999999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 131 L~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~---------------------------------------- 170 (343)
T cd07878 131 LKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADD---------------------------------------- 170 (343)
T ss_pred HHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCC----------------------------------------
Confidence 9999999999999999999999999999999998865330
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
..+..+||++|+||
T Consensus 171 ------------------------------------------------------------------~~~~~~~t~~y~aP 184 (343)
T cd07878 171 ------------------------------------------------------------------EMTGYVATRWYRAP 184 (343)
T ss_pred ------------------------------------------------------------------CcCCccccccccCc
Confidence 00135689999999
Q ss_pred ccccC-CCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhh--ccC----------------------CCC-----
Q 001548 502 EELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDL--RDR----------------------ILP----- 548 (1056)
Q Consensus 502 E~l~~-~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~--~~~----------------------~lp----- 548 (1056)
|++.+ ..++.++|||||||+||+|+++ |............. ... ..+
T Consensus 185 E~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (343)
T cd07878 185 EIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLK 264 (343)
T ss_pred hHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHH
Confidence 99987 5689999999999999999986 43322111111100 000 001
Q ss_pred CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhhh
Q 001548 549 PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (1056)
Q Consensus 549 ~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~~ 591 (1056)
..+...++.+.+|+.+||++||.+|||+.|+|+||||.....+
T Consensus 265 ~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~~ 307 (343)
T cd07878 265 KIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHDP 307 (343)
T ss_pred HhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCCC
Confidence 1122456778899999999999999999999999999875443
No 126
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.96 E-value=3.8e-29 Score=284.35 Aligned_cols=202 Identities=16% Similarity=0.147 Sum_probs=154.0
Q ss_pred hhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Q 001548 265 MVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDY 344 (1056)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~y 344 (1056)
+++...||||+.+......... ...+||||+|++|..++.... .+.+..++.++.||+.||.|
T Consensus 49 ~l~~~~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~ 111 (321)
T cd05603 49 LLKNLKHPFLVGLHYSFQTAEK----------------LYFVLDYVNGGELFFHLQRER-CFLEPRARFYAAEVASAIGY 111 (321)
T ss_pred HHHhCCCCCccceeeEEEcCCE----------------EEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHH
Confidence 5677899999986544322111 124899999999999987654 45666899999999999999
Q ss_pred hhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccccc
Q 001548 345 HHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFS 424 (1056)
Q Consensus 345 lHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 424 (1056)
||++||+||||||+||+|+.++.+||+|||+++....+.
T Consensus 112 lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~----------------------------------------- 150 (321)
T cd05603 112 LHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE----------------------------------------- 150 (321)
T ss_pred HHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-----------------------------------------
Confidence 999999999999999999999999999999876432100
Q ss_pred ccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccc
Q 001548 425 RWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEEL 504 (1056)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l 504 (1056)
......+||+.|+|||++
T Consensus 151 --------------------------------------------------------------~~~~~~~gt~~y~aPE~~ 168 (321)
T cd05603 151 --------------------------------------------------------------ETTSTFCGTPEYLAPEVL 168 (321)
T ss_pred --------------------------------------------------------------CccccccCCcccCCHHHh
Confidence 001145789999999999
Q ss_pred cCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCH----H
Q 001548 505 SGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT----R 577 (1056)
Q Consensus 505 ~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~----~ 577 (1056)
.+..++.++|||||||+||||++| |...... .....+....+ ......+..+.+++.+||++||.+||++ .
T Consensus 169 ~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (321)
T cd05603 169 RKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVS-QMYDNILHKPL-QLPGGKTVAACDLLVGLLHKDQRRRLGAKADFL 246 (321)
T ss_pred cCCCCCCcCcccccchhhhhhhcCCCCCCCCCHH-HHHHHHhcCCC-CCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHH
Confidence 998999999999999999999987 3333222 22222222221 2223457788999999999999999876 5
Q ss_pred HHhhhhhhhhh
Q 001548 578 EILQSEVTNEF 588 (1056)
Q Consensus 578 eil~~~~~~~~ 588 (1056)
++++|+||...
T Consensus 247 ~~~~~~~~~~~ 257 (321)
T cd05603 247 EIKNHVFFSPI 257 (321)
T ss_pred HHhCCCCcCCC
Confidence 99999999753
No 127
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=4.7e-29 Score=282.52 Aligned_cols=234 Identities=16% Similarity=0.093 Sum_probs=179.9
Q ss_pred ccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCccccc
Q 001548 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWI 301 (1056)
Q Consensus 222 g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (1056)
-+|.|+.|...+-.++..+.+.......+.+. ..+.+|..+.|+|||.+........+..
T Consensus 218 ~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~-------~Ea~iMk~L~H~~lV~l~gV~~~~~piy------------- 277 (468)
T KOG0197|consen 218 QFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFL-------REAQIMKKLRHEKLVKLYGVCTKQEPIY------------- 277 (468)
T ss_pred ccceEEEEEEcCCCcccceEEeccccChhHHH-------HHHHHHHhCcccCeEEEEEEEecCCceE-------------
Confidence 45999999996555663444443222222222 3366899999999999887766544333
Q ss_pred CCCcccccCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhccc
Q 001548 302 GGLRQGSSDHGVNLREWLNA-RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1056)
Q Consensus 302 ~~~~~~~~~~GgsL~~~l~~-~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~ 380 (1056)
++|||+.-|+|.+||+. .+..+...+.+.|+.||++|++||+++++|||||...|||++.++.+||+||||||...
T Consensus 278 ---IVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~ 354 (468)
T KOG0197|consen 278 ---IVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIG 354 (468)
T ss_pred ---EEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccC
Confidence 49999999999999987 66778888999999999999999999999999999999999999999999999999544
Q ss_pred ccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCccc
Q 001548 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1056)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~ 460 (1056)
++... .+ ++
T Consensus 355 d~~Y~----------------------------------------------~~--------------------~~----- 363 (468)
T KOG0197|consen 355 DDEYT----------------------------------------------AS--------------------EG----- 363 (468)
T ss_pred CCcee----------------------------------------------ec--------------------CC-----
Confidence 21100 00 00
Q ss_pred ccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHH
Q 001548 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAA 537 (1056)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~ 537 (1056)
+.. ...|.|||.+..+.++.+||||||||+||||+|. +.+......
T Consensus 364 ---------------------~kf----------PIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e 412 (468)
T KOG0197|consen 364 ---------------------GKF----------PIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE 412 (468)
T ss_pred ---------------------CCC----------CceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH
Confidence 000 1127899999999999999999999999999973 334445555
Q ss_pred HHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHh
Q 001548 538 AMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREIL 580 (1056)
Q Consensus 538 ~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil 580 (1056)
.+..+..+..-|.+..+++.+-+++..||+.+|++|||++.+.
T Consensus 413 v~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 413 VLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred HHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 6666666666667778899999999999999999999998543
No 128
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.96 E-value=6.1e-29 Score=282.33 Aligned_cols=197 Identities=18% Similarity=0.178 Sum_probs=152.7
Q ss_pred CCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcC
Q 001548 270 ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQG 349 (1056)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~g 349 (1056)
.||||+.+.......... ..+|+|++|++|..++...+ .+++..++.++.||+.||.|||++|
T Consensus 54 ~h~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~ 116 (318)
T cd05570 54 KHPFLTQLHSCFQTKDRL----------------FFVMEYVNGGDLMFHIQRSG-RFDEPRARFYAAEIVLGLQFLHERG 116 (318)
T ss_pred CCCCccceeeEEEcCCEE----------------EEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 799999876653322111 14899999999999997654 4677799999999999999999999
Q ss_pred cccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccc
Q 001548 350 VTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSL 429 (1056)
Q Consensus 350 IvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 429 (1056)
|+||||||+|||++.++.+||+|||+++......
T Consensus 117 ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------- 150 (318)
T cd05570 117 IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG---------------------------------------------- 150 (318)
T ss_pred eEccCCCHHHeEECCCCcEEecccCCCeecCcCC----------------------------------------------
Confidence 9999999999999999999999999886422000
Q ss_pred cCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCC
Q 001548 430 FPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVC 509 (1056)
Q Consensus 430 ~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~ 509 (1056)
......+||+.|+|||++.+..+
T Consensus 151 ---------------------------------------------------------~~~~~~~g~~~y~aPE~~~~~~~ 173 (318)
T cd05570 151 ---------------------------------------------------------VTTSTFCGTPDYIAPEILSYQPY 173 (318)
T ss_pred ---------------------------------------------------------CcccceecCccccCHHHhcCCCC
Confidence 00013568899999999999999
Q ss_pred CccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCH-----HHHhh
Q 001548 510 TTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT-----REILQ 581 (1056)
Q Consensus 510 t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~-----~eil~ 581 (1056)
+.++|||||||++|||++| |.................. .....++.+.+|+.+||++||.+||++ .+++.
T Consensus 174 ~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 174 GPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVR--YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred CcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC--CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 9999999999999999986 4333322222222222221 122457889999999999999999999 99999
Q ss_pred hhhhhhh
Q 001548 582 SEVTNEF 588 (1056)
Q Consensus 582 ~~~~~~~ 588 (1056)
||||...
T Consensus 252 ~~~~~~~ 258 (318)
T cd05570 252 HPFFREI 258 (318)
T ss_pred CCCcCCC
Confidence 9999764
No 129
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.96 E-value=4.3e-29 Score=284.42 Aligned_cols=202 Identities=16% Similarity=0.148 Sum_probs=154.6
Q ss_pred hhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Q 001548 265 MVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDY 344 (1056)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~y 344 (1056)
++....||||+.+......+.. ...+|||++|++|.+++...+. +.+..++.++.||+.||.|
T Consensus 49 ~l~~~~h~~Iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~qi~~~L~~ 111 (325)
T cd05602 49 LLKNVKHPFLVGLHFSFQTADK----------------LYFVLDYINGGELFYHLQRERC-FLEPRARFYAAEIASALGY 111 (325)
T ss_pred HHHhCCCCCCCceeEEEEcCCe----------------EEEEEeCCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHH
Confidence 4567789999976554332211 1248999999999999977554 5566889999999999999
Q ss_pred hhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccccc
Q 001548 345 HHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFS 424 (1056)
Q Consensus 345 lHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 424 (1056)
||++||+||||||+|||++.++.+||+|||+++......
T Consensus 112 lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~----------------------------------------- 150 (325)
T cd05602 112 LHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN----------------------------------------- 150 (325)
T ss_pred HHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCC-----------------------------------------
Confidence 999999999999999999999999999999886532100
Q ss_pred ccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccc
Q 001548 425 RWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEEL 504 (1056)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l 504 (1056)
......+||+.|+|||++
T Consensus 151 --------------------------------------------------------------~~~~~~~gt~~y~aPE~~ 168 (325)
T cd05602 151 --------------------------------------------------------------GTTSTFCGTPEYLAPEVL 168 (325)
T ss_pred --------------------------------------------------------------CCcccccCCccccCHHHH
Confidence 001145789999999999
Q ss_pred cCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHH----
Q 001548 505 SGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTR---- 577 (1056)
Q Consensus 505 ~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~---- 577 (1056)
.+..++.++|||||||++|||+++ |........ +..+..... ......++.+.+|+.+||++||.+||++.
T Consensus 169 ~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 169 HKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM-YDNILNKPL-QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred cCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHH-HHHHHhCCc-CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 999999999999999999999986 333322222 222222221 22235678899999999999999999875
Q ss_pred HHhhhhhhhhh
Q 001548 578 EILQSEVTNEF 588 (1056)
Q Consensus 578 eil~~~~~~~~ 588 (1056)
++++|+||...
T Consensus 247 ~i~~~~~~~~~ 257 (325)
T cd05602 247 EIKNHIFFSPI 257 (325)
T ss_pred HHhcCcccCCC
Confidence 89999998653
No 130
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=3.4e-27 Score=264.81 Aligned_cols=245 Identities=19% Similarity=0.309 Sum_probs=210.7
Q ss_pred ccccccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEE
Q 001548 727 RDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIF 806 (1056)
Q Consensus 727 ~gh~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iw 806 (1056)
..|+..|.++.+++ ...-.|.+-+.|.+.||+|.+......+. -..-+|.+..|-+--+.+++|+.|..|+||
T Consensus 10 ~~rSdRVKsVd~HP--tePw~la~LynG~V~IWnyetqtmVksfe-----V~~~PvRa~kfiaRknWiv~GsDD~~IrVf 82 (794)
T KOG0276|consen 10 QSRSDRVKSVDFHP--TEPWILAALYNGDVQIWNYETQTMVKSFE-----VSEVPVRAAKFIARKNWIVTGSDDMQIRVF 82 (794)
T ss_pred hccCCceeeeecCC--CCceEEEeeecCeeEEEecccceeeeeee-----ecccchhhheeeeccceEEEecCCceEEEE
Confidence 33566677765532 12235678899999999998876555544 446789999999999999999999999999
Q ss_pred EcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCC-ceEEEEecCCCcEEEEEEecCCCC
Q 001548 807 EFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTG-QTVSHYIEHEKRAWSVDFSQVHPT 885 (1056)
Q Consensus 807 dl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~-~~v~~~~~H~~~V~sv~fsp~d~~ 885 (1056)
++++. .....+..|...|.|++.+|. ..+++|+|.|.+|++||.+.+ .+.++|++|+.-|.+|+|+|.|.+
T Consensus 83 nynt~-------ekV~~FeAH~DyIR~iavHPt-~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~n 154 (794)
T KOG0276|consen 83 NYNTG-------EKVKTFEAHSDYIRSIAVHPT-LPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPN 154 (794)
T ss_pred ecccc-------eeeEEeeccccceeeeeecCC-CCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCcc
Confidence 99863 334556689999999999999 889999999999999999865 688999999999999999999999
Q ss_pred EEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCC-CcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEE
Q 001548 886 KLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHS-SHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYV 963 (1056)
Q Consensus 886 ~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~-~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l 963 (1056)
.|||||-|+||++|.+.+..+..+++ |..+|+||.|-+.| +-+|++|++|.+|++||..+..+ +.++.||.+.|+.+
T Consensus 155 tFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~C-V~TLeGHt~Nvs~v 233 (794)
T KOG0276|consen 155 TFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSC-VQTLEGHTNNVSFV 233 (794)
T ss_pred ceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHH-HHHhhcccccceEE
Confidence 99999999999999999999999997 67889999998866 33899999999999999998776 89999999999999
Q ss_pred EEcCC-CEEEEEECCCeEEEEECCC
Q 001548 964 KFLDS-GTLVTASTDNKLKLWDLKR 987 (1056)
Q Consensus 964 ~fs~~-~~L~SgS~Dg~IkiWdl~~ 987 (1056)
.|+|. -.|+|||.||++|||+-.+
T Consensus 234 ~fhp~lpiiisgsEDGTvriWhs~T 258 (794)
T KOG0276|consen 234 FFHPELPIIISGSEDGTVRIWNSKT 258 (794)
T ss_pred EecCCCcEEEEecCCccEEEecCcc
Confidence 99954 3589999999999999764
No 131
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.96 E-value=2e-29 Score=287.70 Aligned_cols=198 Identities=19% Similarity=0.199 Sum_probs=149.9
Q ss_pred CCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcC
Q 001548 270 ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQG 349 (1056)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~g 349 (1056)
.||+|+.+......+... ..+|+|+.|++|.+++...+ .+++..++.++.||+.||.|||++|
T Consensus 54 ~~p~i~~~~~~~~~~~~~----------------~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qil~al~~LH~~~ 116 (330)
T cd05586 54 ESPFIVGLKFSFQTDSDL----------------YLVTDYMSGGELFWHLQKEG-RFSEDRAKFYIAELVLALEHLHKYD 116 (330)
T ss_pred CCCcCcceEEEEecCCeE----------------EEEEcCCCCChHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 689988765543322111 13899999999999997654 4677799999999999999999999
Q ss_pred cccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccc
Q 001548 350 VTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSL 429 (1056)
Q Consensus 350 IvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 429 (1056)
|+||||||+|||++.++.+||+|||+++......
T Consensus 117 ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~---------------------------------------------- 150 (330)
T cd05586 117 IVYRDLKPENILLDATGHIALCDFGLSKANLTDN---------------------------------------------- 150 (330)
T ss_pred eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC----------------------------------------------
Confidence 9999999999999999999999999886532100
Q ss_pred cCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCC-C
Q 001548 430 FPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-V 508 (1056)
Q Consensus 430 ~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~ 508 (1056)
......+||+.|+|||++.+. .
T Consensus 151 ---------------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~ 173 (330)
T cd05586 151 ---------------------------------------------------------KTTNTFCGTTEYLAPEVLLDEKG 173 (330)
T ss_pred ---------------------------------------------------------CCccCccCCccccCHHHHcCCCC
Confidence 000145689999999999764 4
Q ss_pred CCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCC----CHHHHhh
Q 001548 509 CTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP----TTREILQ 581 (1056)
Q Consensus 509 ~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rp----t~~eil~ 581 (1056)
++.++|||||||+||||++| |...... ..+..+............++.+.+|+.+||++||.+|| ++.++++
T Consensus 174 ~~~~~DvwslGvil~elltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 174 YTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ-QMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred CCCccceeccccEEEEeccCCCCCCCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 89999999999999999987 3332222 22223322222111123578889999999999999998 7899999
Q ss_pred hhhhhhh
Q 001548 582 SEVTNEF 588 (1056)
Q Consensus 582 ~~~~~~~ 588 (1056)
||||...
T Consensus 253 h~~~~~~ 259 (330)
T cd05586 253 HPFFADI 259 (330)
T ss_pred CccccCC
Confidence 9999764
No 132
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.96 E-value=5.4e-29 Score=288.83 Aligned_cols=206 Identities=15% Similarity=0.113 Sum_probs=156.6
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+......+.. -..+||||+||+|.+++... .+++..+..++.||+.||
T Consensus 94 ~~il~~~~h~~iv~~~~~~~~~~~----------------~~lv~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL 155 (370)
T cd05596 94 RDIMAHANSEWIVQLHYAFQDDKY----------------LYMVMEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLAL 155 (370)
T ss_pred HHHHHhCCCCCcceEEEEEecCCE----------------EEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHH
Confidence 456778899999976544322111 12489999999999999654 467778999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 156 ~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~--------------------------------------- 196 (370)
T cd05596 156 DAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANG--------------------------------------- 196 (370)
T ss_pred HHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCC---------------------------------------
Confidence 99999999999999999999999999999999886543100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......+||+.|+|||
T Consensus 197 ---------------------------------------------------------------~~~~~~~~gt~~y~aPE 213 (370)
T cd05596 197 ---------------------------------------------------------------MVRCDTAVGTPDYISPE 213 (370)
T ss_pred ---------------------------------------------------------------cccCCCCCCCcCeECHH
Confidence 00001457999999999
Q ss_pred cccCC----CCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccC--CCCCCCCCCChhHHHHHHhccccCCCC-
Q 001548 503 ELSGG----VCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDR--ILPPSFLSENPKEAGFCLWQLHPEPLS- 572 (1056)
Q Consensus 503 ~l~~~----~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~--~lp~~~~~~~~~~~~li~~lL~~dP~~- 572 (1056)
++.+. .++.++|||||||+||||++| |............+... ...|.....++.+.+||.+||..+|.+
T Consensus 214 ~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~ 293 (370)
T cd05596 214 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRL 293 (370)
T ss_pred HhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhcc
Confidence 98753 478999999999999999986 43333322223332221 222334456888999999999999988
Q ss_pred -CCCHHHHhhhhhhhhh
Q 001548 573 -RPTTREILQSEVTNEF 588 (1056)
Q Consensus 573 -Rpt~~eil~~~~~~~~ 588 (1056)
|+++.++++||||...
T Consensus 294 ~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 294 GRNGVDEIKSHPFFKND 310 (370)
T ss_pred CCCCHHHHhcCcccCCC
Confidence 9999999999999763
No 133
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.96 E-value=3.8e-29 Score=284.84 Aligned_cols=202 Identities=16% Similarity=0.135 Sum_probs=155.4
Q ss_pred hhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Q 001548 265 MVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDY 344 (1056)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~y 344 (1056)
++....||||+.+......+... ..+|+|+.|++|..++...+ .+++..++.++.||+.||+|
T Consensus 49 ~l~~~~hp~iv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~ 111 (325)
T cd05604 49 LLKNVKHPFLVGLHYSFQTTEKL----------------YFVLDFVNGGELFFHLQRER-SFPEPRARFYAAEIASALGY 111 (325)
T ss_pred HHHhCCCCCCccEEEEEecCCEE----------------EEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHH
Confidence 46678999999865543322111 24899999999999987654 46777999999999999999
Q ss_pred hhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccccc
Q 001548 345 HHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFS 424 (1056)
Q Consensus 345 lHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 424 (1056)
||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 112 lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~------------------------------------------ 149 (325)
T cd05604 112 LHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ------------------------------------------ 149 (325)
T ss_pred HHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC------------------------------------------
Confidence 99999999999999999999999999999988643200
Q ss_pred ccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccc
Q 001548 425 RWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEEL 504 (1056)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l 504 (1056)
.......+||+.|+|||++
T Consensus 150 -------------------------------------------------------------~~~~~~~~gt~~y~aPE~~ 168 (325)
T cd05604 150 -------------------------------------------------------------SDTTTTFCGTPEYLAPEVI 168 (325)
T ss_pred -------------------------------------------------------------CCCcccccCChhhCCHHHH
Confidence 0001145789999999999
Q ss_pred cCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCH----H
Q 001548 505 SGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT----R 577 (1056)
Q Consensus 505 ~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~----~ 577 (1056)
.+..++.++|||||||+||||++| |............+. ..+ ...+..++.+.+++.+||+++|.+||++ .
T Consensus 169 ~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~ 246 (325)
T cd05604 169 RKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILH-KPL-VLRPGASLTAWSILEELLEKDRQRRLGAKEDFL 246 (325)
T ss_pred cCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHc-CCc-cCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHH
Confidence 999999999999999999999987 333322222222222 211 1223467888999999999999999987 5
Q ss_pred HHhhhhhhhhh
Q 001548 578 EILQSEVTNEF 588 (1056)
Q Consensus 578 eil~~~~~~~~ 588 (1056)
+++.||||...
T Consensus 247 ~i~~h~~f~~~ 257 (325)
T cd05604 247 EIQEHPFFESL 257 (325)
T ss_pred HHhcCCCcCCC
Confidence 99999999764
No 134
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.96 E-value=1.9e-28 Score=280.27 Aligned_cols=204 Identities=18% Similarity=0.184 Sum_probs=153.4
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+......+... ..+|+|+.|++|.++++..+ .+++..+..++.||+.||
T Consensus 54 ~~~l~~l~h~~iv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l 116 (333)
T cd06650 54 LQVLHECNSPYIVGFYGAFYSDGEI----------------SICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGL 116 (333)
T ss_pred HHHHHHCCCCcccceeEEEEECCEE----------------EEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHH
Confidence 4567777899999877664433221 24899999999999997755 467778999999999999
Q ss_pred HHhhhc-CcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 343 DYHHTQ-GVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 343 ~ylHs~-gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
.|||++ +|+||||||+|||++.++.+||+|||++.......
T Consensus 117 ~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~-------------------------------------- 158 (333)
T cd06650 117 TYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-------------------------------------- 158 (333)
T ss_pred HHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc--------------------------------------
Confidence 999985 79999999999999999999999999886543100
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
.....||..|+||
T Consensus 159 -------------------------------------------------------------------~~~~~~~~~y~aP 171 (333)
T cd06650 159 -------------------------------------------------------------------ANSFVGTRSYMSP 171 (333)
T ss_pred -------------------------------------------------------------------cccCCCCccccCH
Confidence 0034678899999
Q ss_pred ccccCCCCCccchhHHHHHHHHHHhCC---CCcHHH--HHHHHH------------------------------------
Q 001548 502 EELSGGVCTTSSNIYSLGVLFFELFGR---FDSERA--LAAAMS------------------------------------ 540 (1056)
Q Consensus 502 E~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~--~~~~~~------------------------------------ 540 (1056)
|++.+..++.++|||||||++|||+++ |..... ....+.
T Consensus 172 E~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (333)
T cd06650 172 ERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAI 251 (333)
T ss_pred HHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccH
Confidence 999998899999999999999999986 322211 111100
Q ss_pred -----hhccCCCCCC-CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001548 541 -----DLRDRILPPS-FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1056)
Q Consensus 541 -----~~~~~~lp~~-~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~ 588 (1056)
.+.....|.. ....++++.+|+.+||++||.+|||+.|++.||||...
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 252 FELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred HHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 0000000100 11245678899999999999999999999999999764
No 135
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.96 E-value=8.1e-29 Score=260.94 Aligned_cols=231 Identities=19% Similarity=0.383 Sum_probs=202.7
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEE
Q 001548 778 SANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWD 857 (1056)
Q Consensus 778 h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD 857 (1056)
....|.|+.++ ...+++|..|++|+|||.++ ........||.+.|.|+.|. ...++|||.|.+|++||
T Consensus 196 ~skgVYClQYD--D~kiVSGlrDnTikiWD~n~-------~~c~~~L~GHtGSVLCLqyd---~rviisGSSDsTvrvWD 263 (499)
T KOG0281|consen 196 NSKGVYCLQYD--DEKIVSGLRDNTIKIWDKNS-------LECLKILTGHTGSVLCLQYD---ERVIVSGSSDSTVRVWD 263 (499)
T ss_pred cCCceEEEEec--chhhhcccccCceEEecccc-------HHHHHhhhcCCCcEEeeecc---ceEEEecCCCceEEEEe
Confidence 45678999885 67789999999999999874 34445677999999999998 45999999999999999
Q ss_pred cCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEE----EeCCCCeEEEEEccCCCcEEEEEe
Q 001548 858 ACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLAT----IKNIANVCCVQFSAHSSHLLAFGS 933 (1056)
Q Consensus 858 ~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~----~~~~~~V~sv~fsp~~~~~lasGs 933 (1056)
+.+|+++.++.+|...|..+.|+. .+++|+|.|.++.+||+.+...+.. ..|.+.|+.|.|+. .+++++|
T Consensus 264 v~tge~l~tlihHceaVLhlrf~n---g~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~---kyIVsAS 337 (499)
T KOG0281|consen 264 VNTGEPLNTLIHHCEAVLHLRFSN---GYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD---KYIVSAS 337 (499)
T ss_pred ccCCchhhHHhhhcceeEEEEEeC---CEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeecccc---ceEEEec
Confidence 999999999999999999999974 6899999999999999988763321 13778999999974 3899999
Q ss_pred CCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEE
Q 001548 934 ADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGIC 1013 (1056)
Q Consensus 934 ~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls 1013 (1056)
.|.+|++|++.+... +.++.||...|-|+.+ .+.+++|||.|++|++||+. .|.|++.+.||.+-|.++.
T Consensus 338 gDRTikvW~~st~ef-vRtl~gHkRGIAClQY-r~rlvVSGSSDntIRlwdi~--------~G~cLRvLeGHEeLvRciR 407 (499)
T KOG0281|consen 338 GDRTIKVWSTSTCEF-VRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLWDIE--------CGACLRVLEGHEELVRCIR 407 (499)
T ss_pred CCceEEEEeccceee-ehhhhcccccceehhc-cCeEEEecCCCceEEEEecc--------ccHHHHHHhchHHhhhhee
Confidence 999999999998876 7899999999999999 57899999999999999998 7899999999999998888
Q ss_pred ecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCC
Q 001548 1014 RLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWG 1049 (1056)
Q Consensus 1014 ~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~ 1049 (1056)
+ +.+.+++|++||+|++||...+
T Consensus 408 F-------------d~krIVSGaYDGkikvWdl~aa 430 (499)
T KOG0281|consen 408 F-------------DNKRIVSGAYDGKIKVWDLQAA 430 (499)
T ss_pred e-------------cCceeeeccccceEEEEecccc
Confidence 4 5567789999999999998754
No 136
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=8.2e-29 Score=273.51 Aligned_cols=206 Identities=18% Similarity=0.189 Sum_probs=161.3
Q ss_pred HHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHH
Q 001548 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (1056)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QI 338 (1056)
++.+++++ .|||||.+-.+--. -+.++ .+.|.-+||+|++||-+....+.+..++.||+||
T Consensus 67 EVRCMKLV---QHpNiVRLYEViDT--------QTKly--------LiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI 127 (864)
T KOG4717|consen 67 EVRCMKLV---QHPNIVRLYEVIDT--------QTKLY--------LILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQI 127 (864)
T ss_pred HHHHHHHh---cCcCeeeeeehhcc--------cceEE--------EEEEecCCchHHHHHHhhhccccHHHHHHHHHHH
Confidence 55555555 78999976544211 11221 2667789999999998887889999999999999
Q ss_pred HHHHHHhhhcCcccccCCCCCEEEcc-CCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccc
Q 001548 339 VALVDYHHTQGVTFLDLKPSSFKLLQ-SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (1056)
Q Consensus 339 l~gL~ylHs~gIvHrDLKP~NILl~~-~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 417 (1056)
+.|+.|||+..||||||||+|+++.+ -|.||++|||++..+.
T Consensus 128 ~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~------------------------------------- 170 (864)
T KOG4717|consen 128 VHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ------------------------------------- 170 (864)
T ss_pred HHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCC-------------------------------------
Confidence 99999999999999999999998875 4999999999775433
Q ss_pred cccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCC
Q 001548 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (1056)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 497 (1056)
|.+.+++.||+..
T Consensus 171 -------------------------------------------------------------------PG~kL~TsCGSLA 183 (864)
T KOG4717|consen 171 -------------------------------------------------------------------PGKKLTTSCGSLA 183 (864)
T ss_pred -------------------------------------------------------------------Ccchhhcccchhh
Confidence 3345668899999
Q ss_pred ccCcccccCCCCC-ccchhHHHHHHHHHHhCCCCcH---HH--HHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCC
Q 001548 498 YASPEELSGGVCT-TSSNIYSLGVLFFELFGRFDSE---RA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPL 571 (1056)
Q Consensus 498 Y~APE~l~~~~~t-~~sDIwSLGvlL~eLlt~f~~~---~~--~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~ 571 (1056)
|-|||++.|..|+ +++||||||||||-|+||-.++ .. ...++.+.... .|. -.+.++++||..||..||.
T Consensus 184 YSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYt-vPs---hvS~eCrdLI~sMLvRdPk 259 (864)
T KOG4717|consen 184 YSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYT-VPS---HVSKECRDLIQSMLVRDPK 259 (864)
T ss_pred ccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhccccc-Cch---hhhHHHHHHHHHHHhcCch
Confidence 9999999999995 7999999999999999973332 22 22223333322 232 3478899999999999999
Q ss_pred CCCCHHHHhhhhhhhhhhhh
Q 001548 572 SRPTTREILQSEVTNEFQEV 591 (1056)
Q Consensus 572 ~Rpt~~eil~~~~~~~~~~~ 591 (1056)
+|.+.++|..++|++.....
T Consensus 260 kRAslEeI~s~~Wlq~~D~~ 279 (864)
T KOG4717|consen 260 KRASLEEIVSTSWLQAGDRG 279 (864)
T ss_pred hhccHHHHhccccccCCCCC
Confidence 99999999999999876543
No 137
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.96 E-value=2.9e-26 Score=262.39 Aligned_cols=295 Identities=19% Similarity=0.229 Sum_probs=240.5
Q ss_pred ccccccccccceeeecccccCCCCcEEEECCCeEEEEEccCc-----------------------eE-----Ee-EEEee
Q 001548 723 NDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKF-----------------------EV-----QG-MLRTG 773 (1056)
Q Consensus 723 ~~~l~gh~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~-----------------------~~-----~~-~l~~~ 773 (1056)
...+.||.+.|.++.+ ..+....++.+.||.+-+|.++.. +. .. ..+.+
T Consensus 182 ~~~l~gHkd~VvacfF--~~~~~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~ 259 (893)
T KOG0291|consen 182 TYALNGHKDYVVACFF--GANSLDLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKH 259 (893)
T ss_pred eEeccCCCcceEEEEe--ccCcceEEEEecCceEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEee
Confidence 3567899999999887 345566789999999999998711 10 00 11122
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECC-Cc
Q 001548 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYD-GV 852 (1056)
Q Consensus 774 ~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~D-g~ 852 (1056)
=+......|+|.+||+..+.||+|=.+|...+|++.. ........-...+|..++||.. +.+||.|+.- |.
T Consensus 260 ~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~-------f~lih~LSis~~~I~t~~~N~t-GDWiA~g~~klgQ 331 (893)
T KOG0291|consen 260 YLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPD-------FNLIHSLSISDQKILTVSFNST-GDWIAFGCSKLGQ 331 (893)
T ss_pred eecccccceeeeeccCCceEEEEEecCCeeEEEecCC-------ceEEEEeecccceeeEEEeccc-CCEEEEcCCccce
Confidence 2334458899999999999999999999999999873 1222222234678999999988 8899888754 79
Q ss_pred EEEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEE
Q 001548 853 VKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAF 931 (1056)
Q Consensus 853 V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~las 931 (1056)
+-+|++++...+-...+|-..+++++++| ||+++|||++||+|||||..++-|..+|. |.+.|+.++|+..+. .+++
T Consensus 332 LlVweWqsEsYVlKQQgH~~~i~~l~YSp-Dgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~-~lls 409 (893)
T KOG0291|consen 332 LLVWEWQSESYVLKQQGHSDRITSLAYSP-DGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGN-VLLS 409 (893)
T ss_pred EEEEEeeccceeeeccccccceeeEEECC-CCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCC-EEEE
Confidence 99999999998888899999999999999 99999999999999999999999999996 889999999999996 9999
Q ss_pred EeCCCeEEEEEcCCCCcceEEecCC-CCCeEEEEEcCCCE-EEEEECCC-eEEEEECCCCCCCCCCCCceeEEecCCCCc
Q 001548 932 GSADYRTYCYDLRNARAPWCVLAGH-EKAVSYVKFLDSGT-LVTASTDN-KLKLWDLKRTSHTGPSTNACSLTFSGHTNE 1008 (1056)
Q Consensus 932 Gs~Dg~V~lwDlr~~~~~~~~l~gH-~~~V~~l~fs~~~~-L~SgS~Dg-~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~ 1008 (1056)
.|.||+|+.||+...+. ..+|... .-.-++|+..+.+. ++.|+.|. .|.||+++ +|..+-.+.||.++
T Consensus 410 sSLDGtVRAwDlkRYrN-fRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~q--------TGqllDiLsGHEgP 480 (893)
T KOG0291|consen 410 SSLDGTVRAWDLKRYRN-FRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQ--------TGQLLDILSGHEGP 480 (893)
T ss_pred eecCCeEEeeeecccce-eeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEee--------cCeeeehhcCCCCc
Confidence 99999999999988776 5666542 22356777765555 55566665 49999999 78889999999999
Q ss_pred EEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCC
Q 001548 1009 KVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWG 1049 (1056)
Q Consensus 1009 Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~ 1049 (1056)
|.+++ ++|.+..|+++|||.||++|++-..
T Consensus 481 Vs~l~-----------f~~~~~~LaS~SWDkTVRiW~if~s 510 (893)
T KOG0291|consen 481 VSGLS-----------FSPDGSLLASGSWDKTVRIWDIFSS 510 (893)
T ss_pred ceeeE-----------EccccCeEEeccccceEEEEEeecc
Confidence 99999 8899999999999999999997544
No 138
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.96 E-value=1.8e-28 Score=283.27 Aligned_cols=210 Identities=15% Similarity=0.190 Sum_probs=150.4
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+........... .. .....+|+++++ +|.+++.. .++...+..++.||+.||
T Consensus 71 ~~~l~~l~h~niv~~~~~~~~~~~~~-----~~-----~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~~L 136 (359)
T cd07876 71 LVLLKCVNHKNIISLLNVFTPQKSLE-----EF-----QDVYLVMELMDA-NLCQVIHM---ELDHERMSYLLYQMLCGI 136 (359)
T ss_pred HHHHHhCCCCCEeeeeeeeccCCCcc-----cc-----ceeEEEEeCCCc-CHHHHHhc---cCCHHHHHHHHHHHHHHH
Confidence 45677889999998766543222111 00 111247888876 56666643 366778999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 137 ~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~---------------------------------------- 176 (359)
T cd07876 137 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN---------------------------------------- 176 (359)
T ss_pred HHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccC----------------------------------------
Confidence 9999999999999999999999999999999988653210
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
...+...||+.|+|||
T Consensus 177 ----------------------------------------------------------------~~~~~~~~t~~y~aPE 192 (359)
T cd07876 177 ----------------------------------------------------------------FMMTPYVVTRYYRAPE 192 (359)
T ss_pred ----------------------------------------------------------------ccCCCCcccCCCCCch
Confidence 0011456889999999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHH---Hh------------------h-cc-CCCC--------
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAM---SD------------------L-RD-RILP-------- 548 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~---~~------------------~-~~-~~lp-------- 548 (1056)
++.+..++.++|||||||++|||++| |...+....+. .. . .. ...+
T Consensus 193 ~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (359)
T cd07876 193 VILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELF 272 (359)
T ss_pred hccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhc
Confidence 99999999999999999999999986 43222111110 00 0 00 0000
Q ss_pred C---------CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhh
Q 001548 549 P---------SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1056)
Q Consensus 549 ~---------~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~ 590 (1056)
+ .....++.+.+||.+||++||.+|||+.|+|+||||.....
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~ 323 (359)
T cd07876 273 PDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYD 323 (359)
T ss_pred cccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhhcC
Confidence 0 01123467889999999999999999999999999986443
No 139
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.96 E-value=5.1e-29 Score=289.82 Aligned_cols=252 Identities=13% Similarity=0.099 Sum_probs=159.0
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+......+... ..+||||+|++|.+++...+ .+++..++.++.||+.||
T Consensus 52 ~~il~~l~hp~iv~~~~~~~~~~~~----------------~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~ql~~aL 114 (377)
T cd05629 52 RDVLAESDSPWVVSLYYSFQDAQYL----------------YLIMEFLPGGDLMTMLIKYD-TFSEDVTRFYMAECVLAI 114 (377)
T ss_pred HHHHHhCCCCCcceEEEEEEcCCee----------------EEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHH
Confidence 4567778999999876553321111 24899999999999997654 467778999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
+|||++||+||||||+|||++.++.+|++|||+++......... ..+++...... +
T Consensus 115 ~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~--------~~~~~~~~~~~-------~--------- 170 (377)
T cd05629 115 EAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA--------YYQKLLQGKSN-------K--------- 170 (377)
T ss_pred HHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccc--------ccccccccccc-------c---------
Confidence 99999999999999999999999999999999997543211000 00000000000 0
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
+ ...+......+ ..+........ ...+ ...........+||+.|+|||
T Consensus 171 -----~---~~~~~~~~~~~-----~~~~~~~~~~~-----~~~~--------------~~~~~~~~~~~~gt~~y~aPE 218 (377)
T cd05629 171 -----N---RIDNRNSVAVD-----SINLTMSSKDQ-----IATW--------------KKNRRLMAYSTVGTPDYIAPE 218 (377)
T ss_pred -----c---ccccccccccc-----cccccccchhh-----hhhh--------------hhcccccccccCCCccccCHH
Confidence 0 00000000000 00000000000 0000 000000011467999999999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhc--cCCCCCCCCCCChhHHHHHHhccccCCCCC---C
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLR--DRILPPSFLSENPKEAGFCLWQLHPEPLSR---P 574 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~--~~~lp~~~~~~~~~~~~li~~lL~~dP~~R---p 574 (1056)
++.+..++.++|||||||+||||++| |............+. .....|.....++.+.+||.+||. +|.+| +
T Consensus 219 ~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~ 297 (377)
T cd05629 219 IFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRG 297 (377)
T ss_pred HHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCC
Confidence 99999999999999999999999987 333222222222222 112223333567889999999997 67765 5
Q ss_pred CHHHHhhhhhhhhh
Q 001548 575 TTREILQSEVTNEF 588 (1056)
Q Consensus 575 t~~eil~~~~~~~~ 588 (1056)
++.++++||||...
T Consensus 298 ~~~~~l~hp~~~~~ 311 (377)
T cd05629 298 GAHEIKSHPFFRGV 311 (377)
T ss_pred CHHHHhcCCCcCCC
Confidence 99999999999864
No 140
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.96 E-value=4.3e-28 Score=257.72 Aligned_cols=285 Identities=16% Similarity=0.225 Sum_probs=236.3
Q ss_pred cccccccccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcE
Q 001548 724 DLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKI 803 (1056)
Q Consensus 724 ~~l~gh~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg~I 803 (1056)
..|.||.+-|.+++-+. .......+|++||.+++|+++..++...+. .|.+.|..++++. ..++|+|.|++|
T Consensus 60 ~~L~gHrdGV~~lakhp-~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~-----AH~G~V~Gi~v~~--~~~~tvgdDKtv 131 (433)
T KOG0268|consen 60 GSLDGHRDGVSCLAKHP-NKLSTVASGSCDGEVKIWNLSQRECIRTFK-----AHEGLVRGICVTQ--TSFFTVGDDKTV 131 (433)
T ss_pred hhccccccccchhhcCc-chhhhhhccccCceEEEEehhhhhhhheee-----cccCceeeEEecc--cceEEecCCcce
Confidence 44789999888877632 123456799999999999998877766655 8999999999986 778899999999
Q ss_pred EEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecCC
Q 001548 804 KIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVH 883 (1056)
Q Consensus 804 ~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d 883 (1056)
+.|.++. .+......++.+.++.-+.. .+.++|||. .|.|||.....+++.+.--.+.|.++.|+|..
T Consensus 132 K~wk~~~---------~p~~tilg~s~~~gIdh~~~-~~~FaTcGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNpvE 199 (433)
T KOG0268|consen 132 KQWKIDG---------PPLHTILGKSVYLGIDHHRK-NSVFATCGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNPVE 199 (433)
T ss_pred eeeeccC---------Ccceeeeccccccccccccc-cccccccCc--eeeecccccCCccceeecCCCceeEEecCCCc
Confidence 9999874 14445556777888887665 778999985 69999999999999999888899999999988
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeEEEeCCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEE
Q 001548 884 PTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYV 963 (1056)
Q Consensus 884 ~~~laSgs~Dg~V~IWDlr~~~~~~~~~~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l 963 (1056)
..+|++|+.|++|.|||+|++.+++.+.....-+.|+|+|.+ ..|++|+.|..++.||+|....|+.+..+|.++|.+|
T Consensus 200 TsILas~~sDrsIvLyD~R~~~Pl~KVi~~mRTN~IswnPea-fnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dV 278 (433)
T KOG0268|consen 200 TSILASCASDRSIVLYDLRQASPLKKVILTMRTNTICWNPEA-FNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDV 278 (433)
T ss_pred chheeeeccCCceEEEecccCCccceeeeeccccceecCccc-cceeeccccccceehhhhhhcccchhhcccceeEEEe
Confidence 899999999999999999999999988877788899999955 5888999999999999999999999999999999999
Q ss_pred EEcC-CCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEE
Q 001548 964 KFLD-SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTL 1042 (1056)
Q Consensus 964 ~fs~-~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~ 1042 (1056)
+|+| |..++|||.|.+|+||.++.+.+.. ..+ +--...|.++. ||.|.+|+++||.|+.|+
T Consensus 279 dfsptG~EfvsgsyDksIRIf~~~~~~SRd-----iYh--tkRMq~V~~Vk-----------~S~Dskyi~SGSdd~nvR 340 (433)
T KOG0268|consen 279 DFSPTGQEFVSGSYDKSIRIFPVNHGHSRD-----IYH--TKRMQHVFCVK-----------YSMDSKYIISGSDDGNVR 340 (433)
T ss_pred ccCCCcchhccccccceEEEeecCCCcchh-----hhh--HhhhheeeEEE-----------EeccccEEEecCCCccee
Confidence 9995 5669999999999999998433210 000 00112344554 999999999999999999
Q ss_pred EEeCC
Q 001548 1043 SFRTS 1047 (1056)
Q Consensus 1043 iW~v~ 1047 (1056)
+|.-.
T Consensus 341 lWka~ 345 (433)
T KOG0268|consen 341 LWKAK 345 (433)
T ss_pred eeecc
Confidence 99853
No 141
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.96 E-value=8.7e-29 Score=281.65 Aligned_cols=178 Identities=17% Similarity=0.188 Sum_probs=142.1
Q ss_pred cccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhccccccc
Q 001548 305 RQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESAS 384 (1056)
Q Consensus 305 ~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~ 384 (1056)
.+|||++||+|.+++...+. +++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 78 lv~E~~~~g~L~~~~~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~- 155 (323)
T cd05616 78 FVMEYVNGGDLMYQIQQVGR-FKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG- 155 (323)
T ss_pred EEEcCCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC-
Confidence 48999999999999976654 6677999999999999999999999999999999999999999999999886532000
Q ss_pred CCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCccccccc
Q 001548 385 LDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTN 464 (1056)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~ 464 (1056)
T Consensus 156 -------------------------------------------------------------------------------- 155 (323)
T cd05616 156 -------------------------------------------------------------------------------- 155 (323)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHh
Q 001548 465 AGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSD 541 (1056)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~ 541 (1056)
......+||+.|+|||++.+..++.++|||||||++|||++| |............
T Consensus 156 ----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i 213 (323)
T cd05616 156 ----------------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI 213 (323)
T ss_pred ----------------------CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 001145689999999999999999999999999999999986 4333332222222
Q ss_pred hccCCCCCCCCCCChhHHHHHHhccccCCCCCCCH-----HHHhhhhhhhhh
Q 001548 542 LRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT-----REILQSEVTNEF 588 (1056)
Q Consensus 542 ~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~-----~eil~~~~~~~~ 588 (1056)
...... .....++++.+||.+||++||.+|+++ .++++||||...
T Consensus 214 ~~~~~~--~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~ 263 (323)
T cd05616 214 MEHNVA--YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 263 (323)
T ss_pred HhCCCC--CCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence 222221 123467889999999999999999984 899999999764
No 142
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.95 E-value=1e-26 Score=242.50 Aligned_cols=289 Identities=15% Similarity=0.193 Sum_probs=238.8
Q ss_pred cccccccccccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCC
Q 001548 722 DNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSK 801 (1056)
Q Consensus 722 ~~~~l~gh~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg 801 (1056)
....+.||.+.|...+|.. +..-.+++.+|..|-+|+... ++.+.. .+.+|++.|..+.|.+|++.++++|.|+
T Consensus 39 p~m~l~gh~geI~~~~F~P--~gs~~aSgG~Dr~I~LWnv~g-dceN~~---~lkgHsgAVM~l~~~~d~s~i~S~gtDk 112 (338)
T KOG0265|consen 39 PIMLLPGHKGEIYTIKFHP--DGSCFASGGSDRAIVLWNVYG-DCENFW---VLKGHSGAVMELHGMRDGSHILSCGTDK 112 (338)
T ss_pred hhhhcCCCcceEEEEEECC--CCCeEeecCCcceEEEEeccc-ccccee---eeccccceeEeeeeccCCCEEEEecCCc
Confidence 4667899999999998832 333345888999999999432 222222 2459999999999999999999999999
Q ss_pred cEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEec
Q 001548 802 KIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQ 881 (1056)
Q Consensus 802 ~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp 881 (1056)
+++.||..+. .......+|..-|+.+.-+.-...++.|++.||+++|||+++..++++++ ...+++++.|..
T Consensus 113 ~v~~wD~~tG-------~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~-~kyqltAv~f~d 184 (338)
T KOG0265|consen 113 TVRGWDAETG-------KRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE-NKYQLTAVGFKD 184 (338)
T ss_pred eEEEEecccc-------eeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccc-cceeEEEEEecc
Confidence 9999999862 33444557888888887444445689999999999999999999998886 568899999998
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCC---cceEEecCCC
Q 001548 882 VHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNAR---APWCVLAGHE 957 (1056)
Q Consensus 882 ~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~---~~~~~l~gH~ 957 (1056)
.+..+.+|+-|+.|++||+|......++. |...|+.+..+|+|. ++.+-+.|.++++||+|-.- ..+.++.+|.
T Consensus 185 -~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs-~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~ 262 (338)
T KOG0265|consen 185 -TSDQVISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGS-FLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHI 262 (338)
T ss_pred -cccceeeccccCceeeeccccCcceEEeecccCceeeEEeccCCC-ccccccccceEEEEEecccCCCCceEEEeecch
Confidence 88899999999999999999999998887 567899999999997 88889999999999998543 2367777764
Q ss_pred C----CeEEEEEcC-CCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEE
Q 001548 958 K----AVSYVKFLD-SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWL 1032 (1056)
Q Consensus 958 ~----~V~~l~fs~-~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l 1032 (1056)
. .....+|+| +..+.+|+.|..+.+||.. ...++..+.||.+.|..+. |+|....+
T Consensus 263 hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~--------~r~~lyklpGh~gsvn~~~-----------Fhp~e~ii 323 (338)
T KOG0265|consen 263 HNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTT--------SRRILYKLPGHYGSVNEVD-----------FHPTEPII 323 (338)
T ss_pred hhhhhhcceeeccCCCCccccccccceEEEeecc--------cccEEEEcCCcceeEEEee-----------ecCCCcEE
Confidence 3 345667775 4557788899999999987 5578999999999998888 89999999
Q ss_pred EEEEcCCcEEEEe
Q 001548 1033 LLVCFDFTTLSFR 1045 (1056)
Q Consensus 1033 ~s~s~D~~v~iW~ 1045 (1056)
++++.|.++.+-.
T Consensus 324 ls~~sdk~i~lge 336 (338)
T KOG0265|consen 324 LSCSSDKTIYLGE 336 (338)
T ss_pred EEeccCceeEeec
Confidence 9999999998644
No 143
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.95 E-value=1.7e-28 Score=272.87 Aligned_cols=206 Identities=15% Similarity=0.165 Sum_probs=155.6
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~QIl~g 341 (1056)
..++....||||+.+......+... ..+|+|++|++|.+++...+ ..++...+..++.||+.|
T Consensus 44 ~~il~~l~hp~i~~~~~~~~~~~~~----------------~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~a 107 (277)
T cd05607 44 KEILEKVNSPFIVNLAYAFESKTHL----------------CLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCG 107 (277)
T ss_pred HHHHHhcCCCcEEEEEEEEecCCeE----------------EEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHH
Confidence 4467788999998765543321111 14899999999999885543 357777889999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 108 l~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~--------------------------------------- 148 (277)
T cd05607 108 ILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG--------------------------------------- 148 (277)
T ss_pred HHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC---------------------------------------
Confidence 99999999999999999999999999999999987654310
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
.......||..|+||
T Consensus 149 -----------------------------------------------------------------~~~~~~~~~~~y~aP 163 (277)
T cd05607 149 -----------------------------------------------------------------KTITQRAGTNGYMAP 163 (277)
T ss_pred -----------------------------------------------------------------ceeeccCCCCCccCH
Confidence 000134578889999
Q ss_pred ccccCCCCCccchhHHHHHHHHHHhCC---CCcHH---HHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCC
Q 001548 502 EELSGGVCTTSSNIYSLGVLFFELFGR---FDSER---ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT 575 (1056)
Q Consensus 502 E~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~---~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt 575 (1056)
|++.+..++.++|||||||++|||+++ |.... ..............+......++++.+|+.+||++||.+||+
T Consensus 164 E~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~ 243 (277)
T cd05607 164 EILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLG 243 (277)
T ss_pred HHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCC
Confidence 999998899999999999999999986 32221 111222222222222223356888999999999999999999
Q ss_pred H----HHHhhhhhhhhh
Q 001548 576 T----REILQSEVTNEF 588 (1056)
Q Consensus 576 ~----~eil~~~~~~~~ 588 (1056)
+ .+++.|+||...
T Consensus 244 ~~~~~~~~~~h~~f~~~ 260 (277)
T cd05607 244 SREKNDDPRKHEFFKTI 260 (277)
T ss_pred CccchhhhhcChhhcCC
Confidence 9 678899999774
No 144
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.95 E-value=3.8e-29 Score=290.75 Aligned_cols=247 Identities=15% Similarity=0.110 Sum_probs=160.2
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+......+... ..+||||+|++|.++|...+ .+++..++.++.||+.||
T Consensus 52 ~~il~~l~h~~iv~~~~~~~~~~~~----------------~lv~E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~al 114 (376)
T cd05598 52 RDILAEADNEWVVKLYYSFQDKDNL----------------YFVMDYIPGGDMMSLLIRLG-IFEEDLARFYIAELTCAI 114 (376)
T ss_pred HHHHHhCCCCCcceEEEEEEcCCEE----------------EEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHH
Confidence 4567888999999865553322211 14899999999999997765 466778999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
+|||++||+||||||+|||++.++.+||+|||++..+....... .+.. . .... ....
T Consensus 115 ~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~-----------~~~~-~------~~~~----~~~~- 171 (376)
T cd05598 115 ESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK-----------YYQK-G------DHHR----QDSM- 171 (376)
T ss_pred HHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccc-----------cccc-c------cccc----cccc-
Confidence 99999999999999999999999999999999986543110000 0000 0 0000 0000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccc-cccccccccccccCCCccCc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNT-AQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~gt~~Y~AP 501 (1056)
.+.......... . . .+..... ...........+||+.|+||
T Consensus 172 -------------------------~~~~~~~~~~~~-~----------~--~~~~~~~~~~~~~~~~~~~~gt~~y~aP 213 (376)
T cd05598 172 -------------------------EPSEEWSEIDRC-R----------L--KPLERRRKRQHQRCLAHSLVGTPNYIAP 213 (376)
T ss_pred -------------------------cccccccccccc-c----------c--cchhhhhhhhcccccccccCCCccccCH
Confidence 000000000000 0 0 0000000 00000112256899999999
Q ss_pred ccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhcc--CCCCCCCCCCChhHHHHHHhccccCCCCCC--
Q 001548 502 EELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRD--RILPPSFLSENPKEAGFCLWQLHPEPLSRP-- 574 (1056)
Q Consensus 502 E~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~--~~lp~~~~~~~~~~~~li~~lL~~dP~~Rp-- 574 (1056)
|++.+..++.++|||||||+||||++| |............... ....+.....++.+.+||.+|+ .+|.+|+
T Consensus 214 E~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~ 292 (376)
T cd05598 214 EVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGK 292 (376)
T ss_pred HHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCC
Confidence 999999999999999999999999986 4433332222222221 1122333456888999999976 5999999
Q ss_pred -CHHHHhhhhhhhhh
Q 001548 575 -TTREILQSEVTNEF 588 (1056)
Q Consensus 575 -t~~eil~~~~~~~~ 588 (1056)
++.++++||||...
T Consensus 293 ~t~~ell~h~~~~~~ 307 (376)
T cd05598 293 NGADEIKAHPFFKGI 307 (376)
T ss_pred CCHHHHhCCCCcCCC
Confidence 99999999999764
No 145
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.95 E-value=4.1e-27 Score=269.61 Aligned_cols=274 Identities=22% Similarity=0.288 Sum_probs=229.5
Q ss_pred CcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEc-CCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEe
Q 001548 746 DRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFD-RDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVE 824 (1056)
Q Consensus 746 ~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fs-pdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~ 824 (1056)
..+....|..+-++|..+.++... +-|..+.|..+.|- |+.+++|.++..+.+++|+..+ ......
T Consensus 295 ~~l~vtaeQnl~l~d~~~l~i~k~-----ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~--------~~c~ii 361 (775)
T KOG0319|consen 295 QLLLVTAEQNLFLYDEDELTIVKQ-----IVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPT--------SYCQII 361 (775)
T ss_pred ceEEEEccceEEEEEccccEEehh-----hcCCchhheeeeecCCccceEEEEeCCCceEEEecCC--------CceEEE
Confidence 346667788888888766655433 44778888888875 6779999999999999998865 233377
Q ss_pred ecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCC----ceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 001548 825 MSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTG----QTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWN 900 (1056)
Q Consensus 825 ~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~----~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWD 900 (1056)
.+|...|.++..... +.+|+|||.|.++++|-+..+ -++....+|...|.+|+++.....+|+|+|.|+++++|+
T Consensus 362 ~GH~e~vlSL~~~~~-g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~ 440 (775)
T KOG0319|consen 362 PGHTEAVLSLDVWSS-GDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWD 440 (775)
T ss_pred eCchhheeeeeeccc-CcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEec
Confidence 899999999993333 679999999999999988443 366677899999999999887778999999999999999
Q ss_pred CCCCce---eEEE-------eCCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCC
Q 001548 901 INEKNS---LATI-------KNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSG 969 (1056)
Q Consensus 901 lr~~~~---~~~~-------~~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs-~~~ 969 (1056)
+...+. .-.+ .|...|+||+.+|+.. ++||||.|.+.++|++.... ...++.||+..|++|.|+ .+.
T Consensus 441 l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndk-LiAT~SqDktaKiW~le~~~-l~~vLsGH~RGvw~V~Fs~~dq 518 (775)
T KOG0319|consen 441 LPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDK-LIATGSQDKTAKIWDLEQLR-LLGVLSGHTRGVWCVSFSKNDQ 518 (775)
T ss_pred CCCcccccccceehhhHHHHhhcccccceEecCCCc-eEEecccccceeeecccCce-EEEEeeCCccceEEEEeccccc
Confidence 986221 1111 2778899999999987 99999999999999999555 478999999999999999 566
Q ss_pred EEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCC
Q 001548 970 TLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWG 1049 (1056)
Q Consensus 970 ~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~ 1049 (1056)
.++|+|.|.|||||.+. +..|+.+|.||+..|...+ |-.+|..|++++.||-+++|++.++
T Consensus 519 ~laT~SgD~TvKIW~is--------~fSClkT~eGH~~aVlra~-----------F~~~~~qliS~~adGliKlWnikt~ 579 (775)
T KOG0319|consen 519 LLATCSGDKTVKIWSIS--------TFSCLKTFEGHTSAVLRAS-----------FIRNGKQLISAGADGLIKLWNIKTN 579 (775)
T ss_pred eeEeccCCceEEEEEec--------cceeeeeecCccceeEeee-----------eeeCCcEEEeccCCCcEEEEeccch
Confidence 79999999999999998 5689999999999998877 5568999999999999999999998
Q ss_pred eEEEE
Q 001548 1050 CLLLM 1054 (1056)
Q Consensus 1050 ~~~~~ 1054 (1056)
..+.+
T Consensus 580 eC~~t 584 (775)
T KOG0319|consen 580 ECEMT 584 (775)
T ss_pred hhhhh
Confidence 87654
No 146
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.95 E-value=3.2e-28 Score=281.77 Aligned_cols=212 Identities=16% Similarity=0.183 Sum_probs=151.8
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+........... .. .....+|+|+++ +|.+++.. .++...++.++.||+.||
T Consensus 74 ~~~l~~l~h~~ii~~~~~~~~~~~~~-----~~-----~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~aL 139 (364)
T cd07875 74 LVLMKCVNHKNIIGLLNVFTPQKSLE-----EF-----QDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGI 139 (364)
T ss_pred HHHHHhcCCCCccccceeeccccccc-----cc-----CeEEEEEeCCCC-CHHHHHHh---cCCHHHHHHHHHHHHHHH
Confidence 45677889999998665432211110 00 011247888865 78777753 366778999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 140 ~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~---------------------------------------- 179 (364)
T cd07875 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---------------------------------------- 179 (364)
T ss_pred HHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCC----------------------------------------
Confidence 9999999999999999999999999999999998654310
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
...+...||+.|+|||
T Consensus 180 ----------------------------------------------------------------~~~~~~~~t~~y~aPE 195 (364)
T cd07875 180 ----------------------------------------------------------------FMMTPYVVTRYYRAPE 195 (364)
T ss_pred ----------------------------------------------------------------CcccCCcccCCcCCHH
Confidence 0001346889999999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhcc----------------------CC----------C
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRD----------------------RI----------L 547 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~----------------------~~----------l 547 (1056)
++.+..++.++|||||||+||||++| |............+.. ++ .
T Consensus 196 ~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (364)
T cd07875 196 VILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLF 275 (364)
T ss_pred HHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhC
Confidence 99999999999999999999999986 4433222221111110 00 0
Q ss_pred C--------CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhhhc
Q 001548 548 P--------PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (1056)
Q Consensus 548 p--------~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~~~ 592 (1056)
+ .........+.+||.+||+.||.+|||+.++|+||||.....+.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~~~~~ 328 (364)
T cd07875 276 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPS 328 (364)
T ss_pred ccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccccCcc
Confidence 0 00111245678999999999999999999999999998654443
No 147
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.95 E-value=1.8e-28 Score=282.73 Aligned_cols=212 Identities=16% Similarity=0.200 Sum_probs=151.7
Q ss_pred hhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Q 001548 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~g 341 (1056)
...++....||||+.+........... .. .....+|+++++ +|.+++.. .++...++.++.||+.|
T Consensus 66 E~~~l~~l~h~niv~~~~~~~~~~~~~-----~~-----~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~qi~~a 131 (355)
T cd07874 66 ELVLMKCVNHKNIISLLNVFTPQKSLE-----EF-----QDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCG 131 (355)
T ss_pred HHHHHHHhCCCchhceeeeeecccccc-----cc-----ceeEEEhhhhcc-cHHHHHhh---cCCHHHHHHHHHHHHHH
Confidence 345677789999998766533222111 00 112247888876 67777753 36777899999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 132 L~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~--------------------------------------- 172 (355)
T cd07874 132 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS--------------------------------------- 172 (355)
T ss_pred HHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCc---------------------------------------
Confidence 99999999999999999999999999999999998654310
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
.......||+.|+||
T Consensus 173 -----------------------------------------------------------------~~~~~~~~t~~y~aP 187 (355)
T cd07874 173 -----------------------------------------------------------------FMMTPYVVTRYYRAP 187 (355)
T ss_pred -----------------------------------------------------------------cccCCccccCCccCH
Confidence 000135688999999
Q ss_pred ccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHH---HHhhc-------------------cC------CCCCC
Q 001548 502 EELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAA---MSDLR-------------------DR------ILPPS 550 (1056)
Q Consensus 502 E~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~---~~~~~-------------------~~------~lp~~ 550 (1056)
|++.+..++.++|||||||+||||+++ |.+....... +..+. .. .++..
T Consensus 188 E~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (355)
T cd07874 188 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 267 (355)
T ss_pred HHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhh
Confidence 999999999999999999999999986 4332211111 11000 00 00100
Q ss_pred ------------CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhhh
Q 001548 551 ------------FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (1056)
Q Consensus 551 ------------~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~~ 591 (1056)
.......+++|+.+||++||++|||+.|+|+||||....++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~~~ 320 (355)
T cd07874 268 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVWYDP 320 (355)
T ss_pred ccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcccCh
Confidence 01123567899999999999999999999999999865443
No 148
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.95 E-value=1e-28 Score=286.38 Aligned_cols=206 Identities=17% Similarity=0.125 Sum_probs=155.1
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+......+.. ...+||||+||+|.+++... .+++..++.++.||+.||
T Consensus 94 ~~i~~~~~hp~iv~~~~~~~~~~~----------------~~lv~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL 155 (370)
T cd05621 94 RDIMAFANSPWVVQLFCAFQDDKY----------------LYMVMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLAL 155 (370)
T ss_pred HHHHHhCCCCCEeeEEEEEEcCCE----------------EEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHH
Confidence 456777899999987655332211 12489999999999999654 467779999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 156 ~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~--------------------------------------- 196 (370)
T cd05621 156 DAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG--------------------------------------- 196 (370)
T ss_pred HHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCC---------------------------------------
Confidence 99999999999999999999999999999999987643100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......+||+.|+|||
T Consensus 197 ---------------------------------------------------------------~~~~~~~~gt~~Y~aPE 213 (370)
T cd05621 197 ---------------------------------------------------------------MVRCDTAVGTPDYISPE 213 (370)
T ss_pred ---------------------------------------------------------------ceecccCCCCcccCCHH
Confidence 00001457999999999
Q ss_pred cccCCC----CCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccC--CCCCCCCCCChhHHHHHHhccccCCCC-
Q 001548 503 ELSGGV----CTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDR--ILPPSFLSENPKEAGFCLWQLHPEPLS- 572 (1056)
Q Consensus 503 ~l~~~~----~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~--~lp~~~~~~~~~~~~li~~lL~~dP~~- 572 (1056)
++.+.. ++.++|||||||+||||++| |................ ...|.....++.+.+|+.+||..+|.+
T Consensus 214 ~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~ 293 (370)
T cd05621 214 VLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRL 293 (370)
T ss_pred HHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhcc
Confidence 997643 78999999999999999986 43333322222222221 112333456888999999999865544
Q ss_pred -CCCHHHHhhhhhhhhh
Q 001548 573 -RPTTREILQSEVTNEF 588 (1056)
Q Consensus 573 -Rpt~~eil~~~~~~~~ 588 (1056)
|+++.|+++||||...
T Consensus 294 ~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 294 GRNGVEEIKQHPFFKND 310 (370)
T ss_pred CCCCHHHHhcCcccCCC
Confidence 8999999999999764
No 149
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=3.6e-27 Score=275.65 Aligned_cols=254 Identities=18% Similarity=0.267 Sum_probs=206.2
Q ss_pred eeec-CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCC----------------------------CC----------
Q 001548 773 GEFN-NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNAL----------------------------FN---------- 813 (1056)
Q Consensus 773 ~~l~-~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~----------------------------~~---------- 813 (1056)
.++. +|.+.|+++.|++||+|||+||.|+.|+||.+... ..
T Consensus 260 Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~ 339 (712)
T KOG0283|consen 260 QEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS 339 (712)
T ss_pred eccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence 3455 89999999999999999999999999999987540 00
Q ss_pred -C---C-----------cccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEE
Q 001548 814 -D---S-----------VDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVD 878 (1056)
Q Consensus 814 -~---~-----------~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~ 878 (1056)
. . +.......+.||.+.|.+|+|+. +++|+|+|.|.|||||++....|++.|. |.+.|+||+
T Consensus 340 ~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSK--n~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVa 416 (712)
T KOG0283|consen 340 RKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSK--NNFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVA 416 (712)
T ss_pred ccccCCccccCCCccccccccchhhhhccchhheeccccc--CCeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEE
Confidence 0 0 00011134568999999999998 6899999999999999999999999997 999999999
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCCCceeEEEeCCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEe-----
Q 001548 879 FSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVL----- 953 (1056)
Q Consensus 879 fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l----- 953 (1056)
|+|.|.++|+|||-||+|+||++-..+.+.-.....-|++++|.|+|+ ..+.|+.+|.+++|+++..+......
T Consensus 417 FnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk-~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~ 495 (712)
T KOG0283|consen 417 FNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPDGK-GAVIGTFNGYCRFYDTEGLKLVSDFHIRLHN 495 (712)
T ss_pred ecccCCCcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccCCc-eEEEEEeccEEEEEEccCCeEEEeeeEeecc
Confidence 999999999999999999999999877665555667899999999997 78889999999999998876422111
Q ss_pred ---cCCCCCeEEEEEcCCC--EEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCC
Q 001548 954 ---AGHEKAVSYVKFLDSG--TLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLS 1028 (1056)
Q Consensus 954 ---~gH~~~V~~l~fs~~~--~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~ 1028 (1056)
..|. .|+++.|.++. .++..|.|..|||+|++ ...++..|+|+.+.-.-+. ..++.|
T Consensus 496 ~Kk~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~--------~~~lv~KfKG~~n~~SQ~~---------Asfs~D 557 (712)
T KOG0283|consen 496 KKKKQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGR--------DKDLVHKFKGFRNTSSQIS---------ASFSSD 557 (712)
T ss_pred CccccCc-eeeeeEecCCCCCeEEEecCCCceEEEecc--------chhhhhhhcccccCCccee---------eeEccC
Confidence 1133 79999998443 47788899999999997 3467888998876542222 126779
Q ss_pred CCEEEEEEcCCcEEEEeCCC
Q 001548 1029 DCWLLLVCFDFTTLSFRTSW 1048 (1056)
Q Consensus 1029 g~~l~s~s~D~~v~iW~v~~ 1048 (1056)
|+++++++.|..|.+|+.+.
T Consensus 558 gk~IVs~seDs~VYiW~~~~ 577 (712)
T KOG0283|consen 558 GKHIVSASEDSWVYIWKNDS 577 (712)
T ss_pred CCEEEEeecCceEEEEeCCC
Confidence 99999999999999999743
No 150
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.95 E-value=9.3e-29 Score=282.01 Aligned_cols=200 Identities=18% Similarity=0.172 Sum_probs=151.5
Q ss_pred CCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhc
Q 001548 269 NASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQ 348 (1056)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~ 348 (1056)
..||+|+.+.......... ..+|||++|++|.+++...+ .+++..++.++.||+.||.|||++
T Consensus 53 ~~~~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~al~~lH~~ 115 (327)
T cd05617 53 SSNPFLVGLHSCFQTTSRL----------------FLVIEYVNGGDLMFHMQRQR-KLPEEHARFYAAEICIALNFLHER 115 (327)
T ss_pred cCCCCEeeEEEEEEeCCEE----------------EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3689888765443222111 24899999999999987654 477779999999999999999999
Q ss_pred CcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccccccccc
Q 001548 349 GVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWS 428 (1056)
Q Consensus 349 gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 428 (1056)
||+||||||+|||++.++.+||+|||+++......
T Consensus 116 ~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--------------------------------------------- 150 (327)
T cd05617 116 GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG--------------------------------------------- 150 (327)
T ss_pred CeeccCCCHHHEEEeCCCCEEEeccccceeccCCC---------------------------------------------
Confidence 99999999999999999999999999886432000
Q ss_pred ccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCC
Q 001548 429 LFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV 508 (1056)
Q Consensus 429 ~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~ 508 (1056)
......+||+.|+|||++.+..
T Consensus 151 ----------------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~ 172 (327)
T cd05617 151 ----------------------------------------------------------DTTSTFCGTPNYIAPEILRGEE 172 (327)
T ss_pred ----------------------------------------------------------CceecccCCcccCCHHHHCCCC
Confidence 0011457899999999999999
Q ss_pred CCccchhHHHHHHHHHHhCCCCcHH---------HHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCC----
Q 001548 509 CTTSSNIYSLGVLFFELFGRFDSER---------ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT---- 575 (1056)
Q Consensus 509 ~t~~sDIwSLGvlL~eLlt~f~~~~---------~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt---- 575 (1056)
++.++|||||||+||||++|..++. ........+.... .+.....++.+.+++.+||.+||.+|++
T Consensus 173 ~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~ 251 (327)
T cd05617 173 YGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKP-IRIPRFLSVKASHVLKGFLNKDPKERLGCQPQ 251 (327)
T ss_pred CCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCC-CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCC
Confidence 9999999999999999998633221 1112222222221 1122345788999999999999999998
Q ss_pred --HHHHhhhhhhhhhh
Q 001548 576 --TREILQSEVTNEFQ 589 (1056)
Q Consensus 576 --~~eil~~~~~~~~~ 589 (1056)
+.+++.||||....
T Consensus 252 ~~~~~i~~h~~f~~~~ 267 (327)
T cd05617 252 TGFSDIKSHTFFRSID 267 (327)
T ss_pred CCHHHHHcCCCCCCCC
Confidence 57999999998753
No 151
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.95 E-value=5e-29 Score=282.99 Aligned_cols=205 Identities=19% Similarity=0.212 Sum_probs=158.3
Q ss_pred hhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Q 001548 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~g 341 (1056)
...++....||||+.+......+... ..+|+|++|++|.+++.... .+++..++.++.||+.|
T Consensus 48 E~~~l~~l~h~niv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~ 110 (318)
T cd05582 48 ERDILAEVNHPFIVKLHYAFQTEGKL----------------YLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALA 110 (318)
T ss_pred HHHHHHhCCCCCcccEEEEEEcCCEE----------------EEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHH
Confidence 34577888999999876554322111 14899999999999997654 46777999999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 111 l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-------------------------------------- 152 (318)
T cd05582 111 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-------------------------------------- 152 (318)
T ss_pred HHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC--------------------------------------
Confidence 999999999999999999999999999999999876533100
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
.......||+.|+||
T Consensus 153 -----------------------------------------------------------------~~~~~~~g~~~y~aP 167 (318)
T cd05582 153 -----------------------------------------------------------------KKAYSFCGTVEYMAP 167 (318)
T ss_pred -----------------------------------------------------------------CceecccCChhhcCH
Confidence 001145689999999
Q ss_pred ccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCC---
Q 001548 502 EELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT--- 575 (1056)
Q Consensus 502 E~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt--- 575 (1056)
|.+.+..++.++|||||||++|||++| |................. ......++.+.+||.+||++||.+||+
T Consensus 168 E~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 168 EVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL--GMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred HHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 999998899999999999999999986 433332222222222221 122345788999999999999999999
Q ss_pred --HHHHhhhhhhhhh
Q 001548 576 --TREILQSEVTNEF 588 (1056)
Q Consensus 576 --~~eil~~~~~~~~ 588 (1056)
+.+++.||||...
T Consensus 246 ~~~~~~~~~~~~~~~ 260 (318)
T cd05582 246 DGVEEIKRHPFFSTI 260 (318)
T ss_pred CCHHHHhCCCCcCCC
Confidence 6789999999763
No 152
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.95 E-value=1.1e-28 Score=285.16 Aligned_cols=242 Identities=14% Similarity=0.103 Sum_probs=159.0
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||+|+.+......+.. ...+||||+|++|.+++...+ .+++..++.++.||+.||
T Consensus 52 ~~~l~~l~~~~iv~~~~~~~~~~~----------------~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~~L 114 (360)
T cd05627 52 RDILVEADGAWVVKMFYSFQDKRN----------------LYLIMEFLPGGDMMTLLMKKD-TLSEEATQFYIAETVLAI 114 (360)
T ss_pred HHHHHhCCCCCEeeEEEEEEcCCE----------------EEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHH
Confidence 345667789998876544322111 124899999999999997654 467779999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
+|||++||+||||||+|||++.++.+||+|||+++.+......... .. +....
T Consensus 115 ~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~-------~~-------------------~~~~~- 167 (360)
T cd05627 115 DAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFY-------RN-------------------LTHNP- 167 (360)
T ss_pred HHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccc-------cc-------------------cccCC-
Confidence 9999999999999999999999999999999998765421100000 00 00000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
+ .+..... +....................+||+.|+|||
T Consensus 168 -----~-----~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 206 (360)
T cd05627 168 -----P-----SDFSFQN-------------------------------MNSKRKAETWKKNRRQLAYSTVGTPDYIAPE 206 (360)
T ss_pred -----c-----ccccccc-------------------------------cccccccccccccccccccccCCCccccCHH
Confidence 0 0000000 0000000000000011122568999999999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhc--cCCCCCCCCCCChhHHHHHHhccccCCCCCC---
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLR--DRILPPSFLSENPKEAGFCLWQLHPEPLSRP--- 574 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~--~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rp--- 574 (1056)
++.+..++.++|||||||+||||++| |.............. .....|.....++++.+||.+|+. ||.+|+
T Consensus 207 ~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~ 285 (360)
T cd05627 207 VFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSN 285 (360)
T ss_pred HHcCCCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCC
Confidence 99999999999999999999999987 433333222222222 111112223467889999999874 999998
Q ss_pred CHHHHhhhhhhhhhhh
Q 001548 575 TTREILQSEVTNEFQE 590 (1056)
Q Consensus 575 t~~eil~~~~~~~~~~ 590 (1056)
++.++++||||.....
T Consensus 286 ~~~ei~~hp~f~~~~~ 301 (360)
T cd05627 286 GVEEIKSHPFFEGVDW 301 (360)
T ss_pred CHHHHhcCCCCCCCCH
Confidence 4799999999987543
No 153
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.95 E-value=3.7e-28 Score=275.53 Aligned_cols=201 Identities=15% Similarity=0.051 Sum_probs=153.9
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....||||+.+......+. ...+++++.+|+|.+++......++...++.++.||+.||
T Consensus 60 ~~~l~~l~h~niv~~~g~~~~~~-----------------~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L 122 (316)
T cd05108 60 AYVMASVDNPHVCRLLGICLTST-----------------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 122 (316)
T ss_pred HHHHHhCCCCCCCeEEEEEcCCC-----------------ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHH
Confidence 45678889999998665432111 1237889999999999988766778888999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
+|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 123 ~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~------------------------------------- 165 (316)
T cd05108 123 NYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKE------------------------------------- 165 (316)
T ss_pred HHHHhcCeeccccchhheEecCCCcEEEccccccccccCCCcc-------------------------------------
Confidence 9999999999999999999999999999999999765411000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......++..|+|||
T Consensus 166 ----------------------------------------------------------------~~~~~~~~~~~y~apE 181 (316)
T cd05108 166 ----------------------------------------------------------------YHAEGGKVPIKWMALE 181 (316)
T ss_pred ----------------------------------------------------------------eeccCCccceeecChH
Confidence 0000122356699999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~e 578 (1056)
++.+..++.++|||||||+||||++ + |... ........+.....++.....+..+.+++.+||..+|.+||++.+
T Consensus 182 ~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~ 260 (316)
T cd05108 182 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRE 260 (316)
T ss_pred HhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHH
Confidence 9999999999999999999999986 4 3221 112223333333344445566788999999999999999999999
Q ss_pred Hhhh
Q 001548 579 ILQS 582 (1056)
Q Consensus 579 il~~ 582 (1056)
++.+
T Consensus 261 l~~~ 264 (316)
T cd05108 261 LIIE 264 (316)
T ss_pred HHHH
Confidence 9986
No 154
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=5.1e-27 Score=236.86 Aligned_cols=248 Identities=19% Similarity=0.269 Sum_probs=215.2
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001548 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1056)
Q Consensus 774 ~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V 853 (1056)
.+..|.++|.++.|+-+|++..|||.|++|++|+... ........+|...|.+++.+.+ +..|++|+.|..|
T Consensus 12 ~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~r-------g~liktYsghG~EVlD~~~s~D-nskf~s~GgDk~v 83 (307)
T KOG0316|consen 12 ILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLR-------GALIKTYSGHGHEVLDAALSSD-NSKFASCGGDKAV 83 (307)
T ss_pred eecccccceEEEEEccCCCEEEEcCCCceEEeecccc-------cceeeeecCCCceeeecccccc-ccccccCCCCceE
Confidence 4668999999999999999999999999999999763 3445566789999999998887 7899999999999
Q ss_pred EEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCC--ceeEEEe-CCCCeEEEEEccCCCcEEE
Q 001548 854 KLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEK--NSLATIK-NIANVCCVQFSAHSSHLLA 930 (1056)
Q Consensus 854 ~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~--~~~~~~~-~~~~V~sv~fsp~~~~~la 930 (1056)
.+||+.+|+.++.|.+|...|+.|.|+. +...++|||.|.++++||.|+. ++++.+. ....|.+|..+. +.++
T Consensus 84 ~vwDV~TGkv~Rr~rgH~aqVNtV~fNe-esSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~---heIv 159 (307)
T KOG0316|consen 84 QVWDVNTGKVDRRFRGHLAQVNTVRFNE-ESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAE---HEIV 159 (307)
T ss_pred EEEEcccCeeeeecccccceeeEEEecC-cceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEecc---cEEE
Confidence 9999999999999999999999999998 8999999999999999999875 5777775 567899998874 4688
Q ss_pred EEeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcE
Q 001548 931 FGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEK 1009 (1056)
Q Consensus 931 sGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~V 1009 (1056)
+||.||+++.||+|.+.. ..-.. ..+|++++|+ +++..+.++.|++|++-|-. +|+++..++||.+.-
T Consensus 160 aGS~DGtvRtydiR~G~l-~sDy~--g~pit~vs~s~d~nc~La~~l~stlrLlDk~--------tGklL~sYkGhkn~e 228 (307)
T KOG0316|consen 160 AGSVDGTVRTYDIRKGTL-SSDYF--GHPITSVSFSKDGNCSLASSLDSTLRLLDKE--------TGKLLKSYKGHKNME 228 (307)
T ss_pred eeccCCcEEEEEeeccee-ehhhc--CCcceeEEecCCCCEEEEeeccceeeecccc--------hhHHHHHhcccccce
Confidence 899999999999999875 22333 3579999999 78889999999999999987 789999999999977
Q ss_pred EEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCCeEEE
Q 001548 1010 VGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWGCLLL 1053 (1056)
Q Consensus 1010 v~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~~~~~ 1053 (1056)
..+. +++......+++|+-|+.+.+||+--..++.
T Consensus 229 ykld---------c~l~qsdthV~sgSEDG~Vy~wdLvd~~~~s 263 (307)
T KOG0316|consen 229 YKLD---------CCLNQSDTHVFSGSEDGKVYFWDLVDETQIS 263 (307)
T ss_pred eeee---------eeecccceeEEeccCCceEEEEEeccceeee
Confidence 5554 2466677888999999999999988777664
No 155
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.95 E-value=1.2e-28 Score=284.81 Aligned_cols=180 Identities=20% Similarity=0.193 Sum_probs=141.1
Q ss_pred ccccCCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccC--CcEEEeCcchhhccccc
Q 001548 306 QGSSDHGVNLREWLNARGH-KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS--NQVKYIGPIIQKETLES 382 (1056)
Q Consensus 306 ~~~~~~GgsL~~~l~~~~~-~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~--~~vkl~Dfgla~~~~~~ 382 (1056)
+..+.-+.+|.++|+.+.. .++...++.|++|||.||.+||+.||||+||||+||||... ..||+||||.+....
T Consensus 265 iVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~-- 342 (586)
T KOG0667|consen 265 IVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFES-- 342 (586)
T ss_pred eeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccC--
Confidence 4456678899999987653 57788999999999999999999999999999999999754 469999999886643
Q ss_pred ccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCccccc
Q 001548 383 ASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHH 462 (1056)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~ 462 (1056)
T Consensus 343 -------------------------------------------------------------------------------- 342 (586)
T KOG0667|consen 343 -------------------------------------------------------------------------------- 342 (586)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHH
Q 001548 463 TNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAM 539 (1056)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~ 539 (1056)
+.+..++.+..|+|||+|.|.+|+.+.||||||||++||++| |+++.+..+..
T Consensus 343 ------------------------q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~ 398 (586)
T KOG0667|consen 343 ------------------------QRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLA 398 (586)
T ss_pred ------------------------CcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHH
Confidence 112267889999999999999999999999999999999997 66665444432
Q ss_pred HhhccC-----------------------------------------------------CCCCC-------CC-CCChhH
Q 001548 540 SDLRDR-----------------------------------------------------ILPPS-------FL-SENPKE 558 (1056)
Q Consensus 540 ~~~~~~-----------------------------------------------------~lp~~-------~~-~~~~~~ 558 (1056)
.++.-- ..|+. .. .....+
T Consensus 399 ~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F 478 (586)
T KOG0667|consen 399 RIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLF 478 (586)
T ss_pred HHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHH
Confidence 221100 01100 01 122346
Q ss_pred HHHHHhccccCCCCCCCHHHHhhhhhhhhhhhh
Q 001548 559 AGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (1056)
Q Consensus 559 ~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~~ 591 (1056)
.+|+.+||..||.+|+|+.++|+||||......
T Consensus 479 ~dflk~~L~~dP~~R~tp~qal~Hpfl~~~~~~ 511 (586)
T KOG0667|consen 479 IDFLKRCLEWDPAERITPAQALNHPFLTGTSLE 511 (586)
T ss_pred HHHHHHHhccCchhcCCHHHHhcCccccccccc
Confidence 899999999999999999999999999975443
No 156
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.95 E-value=3.2e-28 Score=268.11 Aligned_cols=208 Identities=18% Similarity=0.144 Sum_probs=157.0
Q ss_pred hhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Q 001548 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (1056)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ 343 (1056)
..+....|+|++.+......+... ...+++++|++|.+++.+.+. +++..+..++.||+.||+
T Consensus 54 ~~l~~l~~~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~ 116 (265)
T cd06631 54 DLLKSLKHVNIVQYLGTCLDDNTI----------------SIFMEFVPGGSISSILNRFGP-LPEPVFCKYTKQILDGVA 116 (265)
T ss_pred HHHHhcCCCCEeeEeeEeecCCeE----------------EEEEecCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHH
Confidence 456777899998766553322111 248899999999999977654 567789999999999999
Q ss_pred HhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccc
Q 001548 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (1056)
Q Consensus 344 ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 423 (1056)
|||++||+|+||||+||+++.++.+|++|||+++.........
T Consensus 117 ~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~------------------------------------- 159 (265)
T cd06631 117 YLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHG------------------------------------- 159 (265)
T ss_pred HHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccc-------------------------------------
Confidence 9999999999999999999999999999999987653110000
Q ss_pred cccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCccc
Q 001548 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (1056)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 503 (1056)
..........|+..|+|||+
T Consensus 160 ------------------------------------------------------------~~~~~~~~~~~~~~~~~pe~ 179 (265)
T cd06631 160 ------------------------------------------------------------THSNMLKSMHGTPYWMAPEV 179 (265)
T ss_pred ------------------------------------------------------------cccccccccCCCccccChhh
Confidence 00000113468889999999
Q ss_pred ccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhcc-CCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHH
Q 001548 504 LSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRD-RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579 (1056)
Q Consensus 504 l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~-~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~ei 579 (1056)
+.+..++.++|+|||||++|+|++| |...+........... ...++.....++.+.+|+.+||+++|.+||++.++
T Consensus 180 ~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~ 259 (265)
T cd06631 180 INESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQL 259 (265)
T ss_pred hcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHH
Confidence 9998899999999999999999987 3322222222222222 23444445667889999999999999999999999
Q ss_pred hhhhhh
Q 001548 580 LQSEVT 585 (1056)
Q Consensus 580 l~~~~~ 585 (1056)
+.||||
T Consensus 260 l~~~~~ 265 (265)
T cd06631 260 LRHDFL 265 (265)
T ss_pred hcCCCC
Confidence 999997
No 157
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.95 E-value=3.1e-28 Score=284.72 Aligned_cols=209 Identities=13% Similarity=0.118 Sum_probs=151.9
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+......+... | .+|+++. ++|.+++... ..++..+++.|+.||+.||
T Consensus 137 ~~il~~l~h~~iv~~~~~~~~~~~~-----------~-----lv~e~~~-~~l~~~l~~~-~~l~~~~~~~i~~ql~~aL 198 (392)
T PHA03207 137 IDILKTISHRAIINLIHAYRWKSTV-----------C-----MVMPKYK-CDLFTYVDRS-GPLPLEQAITIQRRLLEAL 198 (392)
T ss_pred HHHHHhcCCCCccceeeeEeeCCEE-----------E-----EEehhcC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHH
Confidence 4467778899999876553322111 1 2667665 6899999543 4577789999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 199 ~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~-------------------------------------- 240 (392)
T PHA03207 199 AYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD-------------------------------------- 240 (392)
T ss_pred HHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccc--------------------------------------
Confidence 999999999999999999999999999999999876441000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......+||+.|+|||
T Consensus 241 ---------------------------------------------------------------~~~~~~~~gt~~y~aPE 257 (392)
T PHA03207 241 ---------------------------------------------------------------TPQCYGWSGTLETNSPE 257 (392)
T ss_pred ---------------------------------------------------------------cccccccccccCccCHh
Confidence 00011457899999999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcH------HHHHHHHHhhcc----------------------CCCC---
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSE------RALAAAMSDLRD----------------------RILP--- 548 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~------~~~~~~~~~~~~----------------------~~lp--- 548 (1056)
++.+..++.++|||||||+||||+++ |.+. .........+.. ...+
T Consensus 258 ~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (392)
T PHA03207 258 LLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYT 337 (392)
T ss_pred HhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCcc
Confidence 99999999999999999999999975 3221 111111111110 0000
Q ss_pred -CCC---CCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhh
Q 001548 549 -PSF---LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1056)
Q Consensus 549 -~~~---~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~ 590 (1056)
+.. ...+..+.+||.+||+.||.+|||+.|+|.||||...+.
T Consensus 338 ~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~ 383 (392)
T PHA03207 338 IPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPI 383 (392)
T ss_pred ccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccch
Confidence 100 123566789999999999999999999999999987543
No 158
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.95 E-value=3.2e-28 Score=275.62 Aligned_cols=248 Identities=17% Similarity=0.144 Sum_probs=160.1
Q ss_pred hhccccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCc
Q 001548 218 TTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1056)
Q Consensus 218 ~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1056)
...+|+|.||++...+.... .....+.......... ......++....||||+.+...........
T Consensus 9 lG~G~~g~Vy~~~~~~~~~~--~~~a~k~~~~~~~~~~---~~~E~~~l~~l~h~niv~~~~~~~~~~~~~--------- 74 (317)
T cd07867 9 VGRGTYGHVYKAKRKDGKDE--KEYALKQIEGTGISMS---ACREIALLRELKHPNVIALQKVFLSHSDRK--------- 74 (317)
T ss_pred eccCCCeeEEEEEecCCCcc--ceEEEEEecCCCCcHH---HHHHHHHHHhCCCCCeeeEEEEEeccCCCe---------
Confidence 34568899999985432211 1111111111111112 122345778889999998765533211110
Q ss_pred ccccCCCcccccCCCCCHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEE----ccC
Q 001548 298 SCWIGGLRQGSSDHGVNLREWLNAR--------GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKL----LQS 365 (1056)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~--------~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl----~~~ 365 (1056)
. ..++++++ ++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||+ ..+
T Consensus 75 ~-----~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~ 148 (317)
T cd07867 75 V-----WLLFDYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPER 148 (317)
T ss_pred E-----EEEEeeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCC
Confidence 1 13566665 4888887532 1246777899999999999999999999999999999999 456
Q ss_pred CcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCccccccccc
Q 001548 366 NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (1056)
Q Consensus 366 ~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1056)
+.+||+|||+++....+..
T Consensus 149 ~~~kl~DfG~a~~~~~~~~------------------------------------------------------------- 167 (317)
T cd07867 149 GRVKIADMGFARLFNSPLK------------------------------------------------------------- 167 (317)
T ss_pred CcEEEeeccceeccCCCcc-------------------------------------------------------------
Confidence 7899999999876541100
Q ss_pred ccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccC-CCCCccchhHHHHHHHHH
Q 001548 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFE 524 (1056)
Q Consensus 446 i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~t~~sDIwSLGvlL~e 524 (1056)
+.......+||+.|+|||++.+ ..++.++|||||||++||
T Consensus 168 ---------------------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~e 208 (317)
T cd07867 168 ---------------------------------------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAE 208 (317)
T ss_pred ---------------------------------------cccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHH
Confidence 0001124578999999999987 458999999999999999
Q ss_pred HhCCCCcHH---------------HHHHHHHhhc------------------------cCCC---------CCCCCCCCh
Q 001548 525 LFGRFDSER---------------ALAAAMSDLR------------------------DRIL---------PPSFLSENP 556 (1056)
Q Consensus 525 Llt~f~~~~---------------~~~~~~~~~~------------------------~~~l---------p~~~~~~~~ 556 (1056)
|++|..++. ........+. .... +........
T Consensus 209 l~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (317)
T cd07867 209 LLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDS 288 (317)
T ss_pred HHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCCh
Confidence 998732211 0000000000 0000 000112345
Q ss_pred hHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 557 KEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 557 ~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
.+.+|+.+||+.||.+|||+.|+|+||||
T Consensus 289 ~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 289 KVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred HHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 67799999999999999999999999997
No 159
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.95 E-value=6.1e-28 Score=266.82 Aligned_cols=208 Identities=15% Similarity=0.107 Sum_probs=152.0
Q ss_pred hhccC-CCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHH
Q 001548 265 MVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 265 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~QIl~gL 342 (1056)
++... .|||++.+........... .. +. -..+|+++.+++|.+++... +..+++..++.++.||+.||
T Consensus 55 ~l~~~~~h~~i~~~~~~~~~~~~~~---~~--~~-----~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l 124 (272)
T cd06637 55 MLKKYSHHRNIATYYGAFIKKNPPG---MD--DQ-----LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGL 124 (272)
T ss_pred HHHHhcCCCCeeeEeeEEeecCCCC---CC--cE-----EEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHH
Confidence 34443 6999998766533221110 00 00 12489999999999999764 34678888999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 125 ~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~--------------------------------------- 165 (272)
T cd06637 125 SHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV--------------------------------------- 165 (272)
T ss_pred HHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceeccccc---------------------------------------
Confidence 99999999999999999999999999999999886543100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......|+..|+|||
T Consensus 166 ----------------------------------------------------------------~~~~~~~g~~~y~aPE 181 (272)
T cd06637 166 ----------------------------------------------------------------GRRNTFIGTPYWMAPE 181 (272)
T ss_pred ----------------------------------------------------------------ccCCcccccccccCHh
Confidence 0001456888999999
Q ss_pred cccC-----CCCCccchhHHHHHHHHHHhCCCCcH---HHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCC
Q 001548 503 ELSG-----GVCTTSSNIYSLGVLFFELFGRFDSE---RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (1056)
Q Consensus 503 ~l~~-----~~~t~~sDIwSLGvlL~eLlt~f~~~---~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rp 574 (1056)
++.+ ..++.++|||||||++|||+++..++ ......................+..+.+|+.+||..||.+||
T Consensus 182 ~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 261 (272)
T cd06637 182 VIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRP 261 (272)
T ss_pred HhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCC
Confidence 9863 45889999999999999999874332 222222222222211222234567899999999999999999
Q ss_pred CHHHHhhhhhh
Q 001548 575 TTREILQSEVT 585 (1056)
Q Consensus 575 t~~eil~~~~~ 585 (1056)
|+.+++.||||
T Consensus 262 t~~~il~~~~~ 272 (272)
T cd06637 262 TTEQLMKHPFI 272 (272)
T ss_pred CHHHHhhCCCC
Confidence 99999999997
No 160
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.95 E-value=5.7e-28 Score=268.87 Aligned_cols=251 Identities=17% Similarity=0.148 Sum_probs=172.5
Q ss_pred hHHHhhhc--cccceeeeCCCCCcccc-ccccccccccccccCCch-hHHHHhhhhhhccCCCCCCCcccceeeecCCCC
Q 001548 213 EFFVKTTL--KGKGIVCRGPPLNAFKE-RRGMIDTKAFVTTTMPSD-AALKAAGAMMVASNASPKPVGVGTAVVSNGSLD 288 (1056)
Q Consensus 213 ~~~~k~~~--~g~Gvv~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1056)
.|.+...+ +|.|.||+|........ .......+.. ......+ ...-......+....|||++.+......+..
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~-~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~-- 82 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTL-KENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQP-- 82 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEec-ccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCc--
Confidence 44555555 47899999875322100 0011111111 1111111 1111223456777889999876554221111
Q ss_pred CCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCcccc
Q 001548 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------------HKGKRIECLYIFRQIVALVDYHHTQGVTFL 353 (1056)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~---------------~~~~~~~~~~i~~QIl~gL~ylHs~gIvHr 353 (1056)
....+++++|++|.++|.... ..++...++.++.||+.||.|||++||+||
T Consensus 83 --------------~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~ 148 (283)
T cd05048 83 --------------TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHR 148 (283)
T ss_pred --------------eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 113789999999999997642 346677899999999999999999999999
Q ss_pred cCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCC
Q 001548 354 DLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSK 433 (1056)
Q Consensus 354 DLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~ 433 (1056)
||||+||+++.++.+||+|||+++........
T Consensus 149 dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~------------------------------------------------ 180 (283)
T cd05048 149 DLAARNCLVGEGLTVKISDFGLSRDIYSADYY------------------------------------------------ 180 (283)
T ss_pred ccccceEEEcCCCcEEECCCcceeeccccccc------------------------------------------------
Confidence 99999999999999999999998654310000
Q ss_pred CCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccc
Q 001548 434 YGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSS 513 (1056)
Q Consensus 434 ~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~s 513 (1056)
.......+++.|+|||.+.+..++.++
T Consensus 181 -----------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~s 207 (283)
T cd05048 181 -----------------------------------------------------RVQSKSLLPVRWMPPEAILYGKFTTES 207 (283)
T ss_pred -----------------------------------------------------cccCCCcccccccCHHHhccCcCchhh
Confidence 000133567789999999988999999
Q ss_pred hhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001548 514 NIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 514 DIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~ 582 (1056)
|||||||+||||++ + |.+... ...+..+..+..++.....++.+.+|+.+||.+||.+||++.+|+++
T Consensus 208 Dv~slG~il~el~~~g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 208 DIWSFGVVLWEIFSYGLQPYYGFSN-QEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred hHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 99999999999996 4 333222 23344444555555556678899999999999999999999999875
No 161
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.95 E-value=2.9e-28 Score=274.28 Aligned_cols=208 Identities=16% Similarity=0.198 Sum_probs=154.0
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....||||+.+......... ...+|+|+. ++|.+++...+..++...++.++.||+.||
T Consensus 55 ~~~l~~l~h~nI~~~~~~~~~~~~----------------~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL 117 (301)
T cd07873 55 VSLLKDLKHANIVTLHDIIHTEKS----------------LTLVFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGL 117 (301)
T ss_pred HHHHHhcCCCCcceEEEEEecCCe----------------EEEEEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 456777899999987665432211 113788887 599999977666788889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+|+||||+||+++.++.+|++|||+++....+.
T Consensus 118 ~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~--------------------------------------- 158 (301)
T cd07873 118 NYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT--------------------------------------- 158 (301)
T ss_pred HHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC---------------------------------------
Confidence 99999999999999999999999999999999886533100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......+++.|+|||
T Consensus 159 ----------------------------------------------------------------~~~~~~~~~~~y~~PE 174 (301)
T cd07873 159 ----------------------------------------------------------------KTYSNEVVTLWYRPPD 174 (301)
T ss_pred ----------------------------------------------------------------CcccccceeecccCcH
Confidence 0001335678899999
Q ss_pred cccCC-CCCccchhHHHHHHHHHHhCC---CCcHHHHHH---HHHhhcc-----------------CCCCC--------C
Q 001548 503 ELSGG-VCTTSSNIYSLGVLFFELFGR---FDSERALAA---AMSDLRD-----------------RILPP--------S 550 (1056)
Q Consensus 503 ~l~~~-~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~---~~~~~~~-----------------~~lp~--------~ 550 (1056)
++.+. .++.++|||||||++|||++| |........ .+..+.. ...|. .
T Consensus 175 ~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (301)
T cd07873 175 ILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNH 254 (301)
T ss_pred HHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhh
Confidence 98764 478999999999999999987 333222111 1111100 00110 1
Q ss_pred CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhh
Q 001548 551 FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1056)
Q Consensus 551 ~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~ 590 (1056)
....++.+.+||.+||++||.+|||+.|+|+||||....+
T Consensus 255 ~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~ 294 (301)
T cd07873 255 APRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGE 294 (301)
T ss_pred cCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence 1245677889999999999999999999999999987653
No 162
>PHA02988 hypothetical protein; Provisional
Probab=99.95 E-value=5e-28 Score=270.28 Aligned_cols=238 Identities=15% Similarity=0.053 Sum_probs=168.1
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCCch--hHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCc
Q 001548 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD--AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1056)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1056)
-+|.|.||+|...+...+ .+.......... ...-......+....||||+.+......... ....
T Consensus 30 ~g~~~~v~~~~~~~~~va------vK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~-------~~~~ 96 (283)
T PHA02988 30 ENDQNSIYKGIFNNKEVI------IRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVD-------DLPR 96 (283)
T ss_pred eCCceEEEEEEECCEEEE------EEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEeccc-------CCCc
Confidence 458899999988432222 111111101010 1111233567888899999987665432000 0001
Q ss_pred ccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhh-cCcccccCCCCCEEEccCCcEEEeCcchh
Q 001548 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1056)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs-~gIvHrDLKP~NILl~~~~~vkl~Dfgla 376 (1056)
...+|||+.||+|.+++...+ .++......++.|++.||.|||+ .+++||||||+|||++.++.+|++|||++
T Consensus 97 -----~~lv~Ey~~~g~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~ 170 (283)
T PHA02988 97 -----LSLILEYCTRGYLREVLDKEK-DLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLE 170 (283)
T ss_pred -----eEEEEEeCCCCcHHHHHhhCC-CCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchH
Confidence 124899999999999997754 56677899999999999999998 59999999999999999999999999998
Q ss_pred hcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCC
Q 001548 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1056)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~ 456 (1056)
+.+..+.
T Consensus 171 ~~~~~~~------------------------------------------------------------------------- 177 (283)
T PHA02988 171 KILSSPP------------------------------------------------------------------------- 177 (283)
T ss_pred hhhcccc-------------------------------------------------------------------------
Confidence 7643100
Q ss_pred CcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccC--CCCCccchhHHHHHHHHHHhCC---CCc
Q 001548 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG--GVCTTSSNIYSLGVLFFELFGR---FDS 531 (1056)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~--~~~t~~sDIwSLGvlL~eLlt~---f~~ 531 (1056)
...+||..|+|||++.+ ..++.++|||||||++|||++| |..
T Consensus 178 ---------------------------------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~ 224 (283)
T PHA02988 178 ---------------------------------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFEN 224 (283)
T ss_pred ---------------------------------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCC
Confidence 02357788999999987 6799999999999999999986 443
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001548 532 ERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 532 ~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~ 582 (1056)
..........+.....++.....++.+.+|+.+||+.||.+|||+.++++.
T Consensus 225 ~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 275 (283)
T PHA02988 225 LTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYN 275 (283)
T ss_pred CCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 333332232322322233333678889999999999999999999999863
No 163
>PTZ00284 protein kinase; Provisional
Probab=99.95 E-value=1.8e-28 Score=293.33 Aligned_cols=174 Identities=21% Similarity=0.277 Sum_probs=129.5
Q ss_pred ccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhh-cCcccccCCCCCEEEccCC----------------cE
Q 001548 306 QGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT-QGVTFLDLKPSSFKLLQSN----------------QV 368 (1056)
Q Consensus 306 ~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs-~gIvHrDLKP~NILl~~~~----------------~v 368 (1056)
+|+++ |++|.+++...+ .+++..++.|+.||+.||+|||+ .|||||||||+|||++..+ .+
T Consensus 210 v~~~~-g~~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~v 287 (467)
T PTZ00284 210 VMPKY-GPCLLDWIMKHG-PFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRV 287 (467)
T ss_pred EEecc-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceE
Confidence 45554 889999997664 46777999999999999999998 5999999999999998665 37
Q ss_pred EEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccc
Q 001548 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1056)
Q Consensus 369 kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d 448 (1056)
||+|||++....
T Consensus 288 kl~DfG~~~~~~-------------------------------------------------------------------- 299 (467)
T PTZ00284 288 RICDLGGCCDER-------------------------------------------------------------------- 299 (467)
T ss_pred EECCCCccccCc--------------------------------------------------------------------
Confidence 777777553211
Q ss_pred cCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCC
Q 001548 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR 528 (1056)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~ 528 (1056)
...+..+||++|+|||++.+..|+.++|||||||+||||++|
T Consensus 300 --------------------------------------~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG 341 (467)
T PTZ00284 300 --------------------------------------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTG 341 (467)
T ss_pred --------------------------------------cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhC
Confidence 001146799999999999999999999999999999999987
Q ss_pred ---CCcHHHHHH--HHHhhccCCCCC---------------------------------------CCCCCChhHHHHHHh
Q 001548 529 ---FDSERALAA--AMSDLRDRILPP---------------------------------------SFLSENPKEAGFCLW 564 (1056)
Q Consensus 529 ---f~~~~~~~~--~~~~~~~~~lp~---------------------------------------~~~~~~~~~~~li~~ 564 (1056)
|.+...... .+...... +|. ......+.+.+||.+
T Consensus 342 ~~pf~~~~~~~~~~~i~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~ 420 (467)
T PTZ00284 342 KLLYDTHDNLEHLHLMEKTLGR-LPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYG 420 (467)
T ss_pred CCCCCCCChHHHHHHHHHHcCC-CCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHH
Confidence 433222111 11111000 000 000124557799999
Q ss_pred ccccCCCCCCCHHHHhhhhhhhhh
Q 001548 565 QLHPEPLSRPTTREILQSEVTNEF 588 (1056)
Q Consensus 565 lL~~dP~~Rpt~~eil~~~~~~~~ 588 (1056)
||++||.+|||+.|+|+||||...
T Consensus 421 mL~~dP~~R~ta~e~L~Hp~~~~~ 444 (467)
T PTZ00284 421 LLHYDRQKRLNARQMTTHPYVLKY 444 (467)
T ss_pred hCCcChhhCCCHHHHhcCcccccc
Confidence 999999999999999999999874
No 164
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.95 E-value=8.4e-28 Score=267.63 Aligned_cols=207 Identities=13% Similarity=0.079 Sum_probs=157.2
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....|||++.+......+. ....+++|++|++|..++......+++..++.++.||+.||
T Consensus 53 ~~~l~~l~h~~ii~~~~~~~~~~----------------~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L 116 (282)
T cd06643 53 IDILASCDHPNIVKLLDAFYYEN----------------NLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEAL 116 (282)
T ss_pred HHHHHHCCCCCeeeEEEEEeeCC----------------EEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 45677789999997655533211 12248999999999998876556688889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||+.||+||||||+||+++.++.+|++|||+++......
T Consensus 117 ~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~--------------------------------------- 157 (282)
T cd06643 117 NYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI--------------------------------------- 157 (282)
T ss_pred HHHHHCCeeecCCCcccEEEccCCCEEEccccccccccccc---------------------------------------
Confidence 99999999999999999999999999999999886533100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......+|+.|+|||
T Consensus 158 ----------------------------------------------------------------~~~~~~~~~~~y~aPE 173 (282)
T cd06643 158 ----------------------------------------------------------------QRRDSFIGTPYWMAPE 173 (282)
T ss_pred ----------------------------------------------------------------cccccccccccccCHh
Confidence 0001345788899999
Q ss_pred ccc-----CCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCC-CCCCCCCCChhHHHHHHhccccCCCCC
Q 001548 503 ELS-----GGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRI-LPPSFLSENPKEAGFCLWQLHPEPLSR 573 (1056)
Q Consensus 503 ~l~-----~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~-lp~~~~~~~~~~~~li~~lL~~dP~~R 573 (1056)
++. +..++.++|||||||++|||+++ |................. ..+.....+..+.+||.+||++||.+|
T Consensus 174 ~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 253 (282)
T cd06643 174 VVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDAR 253 (282)
T ss_pred hccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhC
Confidence 984 35578899999999999999986 333323333333222221 112233457789999999999999999
Q ss_pred CCHHHHhhhhhhhhh
Q 001548 574 PTTREILQSEVTNEF 588 (1056)
Q Consensus 574 pt~~eil~~~~~~~~ 588 (1056)
|++.++++||||...
T Consensus 254 p~~~~il~~~~~~~~ 268 (282)
T cd06643 254 WTTTQLLQHPFVTVN 268 (282)
T ss_pred cCHHHHhcCCCEecc
Confidence 999999999999864
No 165
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.95 E-value=2.6e-28 Score=278.94 Aligned_cols=207 Identities=13% Similarity=0.105 Sum_probs=155.9
Q ss_pred hhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Q 001548 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (1056)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ 343 (1056)
.++....|++|+.+......+.. ...+|||++||+|.+++...+..+++..++.++.||+.||+
T Consensus 53 ~~l~~~~~~~i~~~~~~~~~~~~----------------~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~ 116 (332)
T cd05623 53 DVLVNGDNQWITTLHYAFQDENN----------------LYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAID 116 (332)
T ss_pred HHHhhCCCCCEeeEEEEEecCCE----------------EEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 35566788998876555332211 12489999999999999876566788899999999999999
Q ss_pred HhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccc
Q 001548 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (1056)
Q Consensus 344 ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 423 (1056)
|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 117 ~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~---------------------------------------- 156 (332)
T cd05623 117 SVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG---------------------------------------- 156 (332)
T ss_pred HHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCC----------------------------------------
Confidence 9999999999999999999999999999999886543100
Q ss_pred cccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCccc
Q 001548 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (1056)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 503 (1056)
.......+||+.|+|||+
T Consensus 157 --------------------------------------------------------------~~~~~~~~gt~~y~aPE~ 174 (332)
T cd05623 157 --------------------------------------------------------------TVQSSVAVGTPDYISPEI 174 (332)
T ss_pred --------------------------------------------------------------cceecccccCccccCHHH
Confidence 000013579999999999
Q ss_pred ccC-----CCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhcc---CCCCCCCCCCChhHHHHHHhccccCCCC
Q 001548 504 LSG-----GVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRD---RILPPSFLSENPKEAGFCLWQLHPEPLS 572 (1056)
Q Consensus 504 l~~-----~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~---~~lp~~~~~~~~~~~~li~~lL~~dP~~ 572 (1056)
+.+ ..++.++|||||||+||||++| |............... ..+|......++.+.+|+.+||..+|.+
T Consensus 175 ~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r 254 (332)
T cd05623 175 LQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHR 254 (332)
T ss_pred HhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhh
Confidence 863 4689999999999999999986 4333322222222222 2244445567888999999999665544
Q ss_pred --CCCHHHHhhhhhhhhh
Q 001548 573 --RPTTREILQSEVTNEF 588 (1056)
Q Consensus 573 --Rpt~~eil~~~~~~~~ 588 (1056)
|+++.++++||||...
T Consensus 255 ~~r~~~~~~~~h~~f~~~ 272 (332)
T cd05623 255 LGQNGIEDFKQHPFFTGI 272 (332)
T ss_pred cCCCCHHHHhCCCCcCCC
Confidence 6899999999999864
No 166
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.95 E-value=3.1e-28 Score=279.67 Aligned_cols=195 Identities=19% Similarity=0.119 Sum_probs=151.7
Q ss_pred hhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Q 001548 265 MVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDY 344 (1056)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~y 344 (1056)
++.--.||||+++.+.... ....+ .+|+.+.|+-|.+.+....... .++..|++||+.||+|
T Consensus 369 ~~~~~~h~niv~~~~v~~~----------~~~~~------~v~e~l~g~ell~ri~~~~~~~--~e~~~w~~~lv~Av~~ 430 (612)
T KOG0603|consen 369 SLLVRDHPNIVKSHDVYED----------GKEIY------LVMELLDGGELLRRIRSKPEFC--SEASQWAAELVSAVDY 430 (612)
T ss_pred hhhhcCCCcceeecceecC----------Cceee------eeehhccccHHHHHHHhcchhH--HHHHHHHHHHHHHHHH
Confidence 4555589999976555221 11222 3899999999988886654333 5788999999999999
Q ss_pred hhhcCcccccCCCCCEEE-ccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccc
Q 001548 345 HHTQGVTFLDLKPSSFKL-LQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (1056)
Q Consensus 345 lHs~gIvHrDLKP~NILl-~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 423 (1056)
||++|||||||||+|||+ ...++++|+|||.++.....
T Consensus 431 LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~----------------------------------------- 469 (612)
T KOG0603|consen 431 LHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS----------------------------------------- 469 (612)
T ss_pred HHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh-----------------------------------------
Confidence 999999999999999999 58899999999988775511
Q ss_pred cccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCccc
Q 001548 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (1056)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 503 (1056)
+...+-|..|.|||+
T Consensus 470 -----------------------------------------------------------------~~tp~~t~~y~APEv 484 (612)
T KOG0603|consen 470 -----------------------------------------------------------------CDTPALTLQYVAPEV 484 (612)
T ss_pred -----------------------------------------------------------------hcccchhhcccChhh
Confidence 113355777999999
Q ss_pred ccCCCCCccchhHHHHHHHHHHhCCCCcHHH---HHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHh
Q 001548 504 LSGGVCTTSSNIYSLGVLFFELFGRFDSERA---LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREIL 580 (1056)
Q Consensus 504 l~~~~~t~~sDIwSLGvlL~eLlt~f~~~~~---~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil 580 (1056)
+....|++++||||||++||+||+|..+... ....+..+..+ +.-...+..+++|+.+||+.||.+||++.+++
T Consensus 485 l~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~---~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~ 561 (612)
T KOG0603|consen 485 LAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMP---KFSECVSDEAKDLLQQLLQVDPALRLGADEIG 561 (612)
T ss_pred hccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCC---ccccccCHHHHHHHHHhccCChhhCcChhhhc
Confidence 9999999999999999999999998433322 22233333222 22257789999999999999999999999999
Q ss_pred hhhhhh
Q 001548 581 QSEVTN 586 (1056)
Q Consensus 581 ~~~~~~ 586 (1056)
.||||.
T Consensus 562 ~h~w~~ 567 (612)
T KOG0603|consen 562 AHPWFL 567 (612)
T ss_pred cCcchh
Confidence 999993
No 167
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=99.95 E-value=4.2e-26 Score=232.13 Aligned_cols=266 Identities=18% Similarity=0.264 Sum_probs=216.0
Q ss_pred cccccccccccceeeecccccCCC-CcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCC
Q 001548 722 DNDLLRDRENLFLAQQDQEIQNPT-DRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVS 800 (1056)
Q Consensus 722 ~~~~l~gh~~~v~~~~~~~~~~~~-~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~D 800 (1056)
...+++-.++-|..+.. .|+ ..|.+..-..++++|+.+....... .+.+|...|.++.|..+|+.++|||.|
T Consensus 32 C~rTiqh~dsqVNrLei----Tpdk~~LAaa~~qhvRlyD~~S~np~Pv~---t~e~h~kNVtaVgF~~dgrWMyTgseD 104 (311)
T KOG0315|consen 32 CSRTIQHPDSQVNRLEI----TPDKKDLAAAGNQHVRLYDLNSNNPNPVA---TFEGHTKNVTAVGFQCDGRWMYTGSED 104 (311)
T ss_pred EEEEEecCccceeeEEE----cCCcchhhhccCCeeEEEEccCCCCCcee---EEeccCCceEEEEEeecCeEEEecCCC
Confidence 34444444444555432 333 3456666778999999887664333 366999999999999999999999999
Q ss_pred CcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEe-cCCCcEEEEEE
Q 001548 801 KKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYI-EHEKRAWSVDF 879 (1056)
Q Consensus 801 g~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~-~H~~~V~sv~f 879 (1056)
|++||||+.. ......+.|.+.|+++..+|+ ...|++|..+|.|++||+.+..+...+. +....|.++..
T Consensus 105 gt~kIWdlR~--------~~~qR~~~~~spVn~vvlhpn-QteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v 175 (311)
T KOG0315|consen 105 GTVKIWDLRS--------LSCQRNYQHNSPVNTVVLHPN-QTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTV 175 (311)
T ss_pred ceEEEEeccC--------cccchhccCCCCcceEEecCC-cceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEE
Confidence 9999999974 222344577899999999998 8889999999999999999887766553 45578999999
Q ss_pred ecCCCCEEEEEeCCCcEEEEECCCCc------eeEEEe-CCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEE
Q 001548 880 SQVHPTKLASGSDDCSVKLWNINEKN------SLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCV 952 (1056)
Q Consensus 880 sp~d~~~laSgs~Dg~V~IWDlr~~~------~~~~~~-~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~ 952 (1056)
.| +|.+++.+...|++.+|++-... ++..++ |..-+..+.++|+++ +||++|.|.+++||.+.+.-..-..
T Consensus 176 ~~-dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k-~lat~ssdktv~iwn~~~~~kle~~ 253 (311)
T KOG0315|consen 176 MP-DGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVK-YLATCSSDKTVKIWNTDDFFKLELV 253 (311)
T ss_pred cC-CCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCc-EEEeecCCceEEEEecCCceeeEEE
Confidence 99 99999999999999999997654 333343 667899999999997 9999999999999999887333467
Q ss_pred ecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEE
Q 001548 953 LAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGIC 1013 (1056)
Q Consensus 953 l~gH~~~V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls 1013 (1056)
+.+|..+|+..+|+ ++.+|+|||.|+++++||+. .++.++.+.||-...++++
T Consensus 254 l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~--------~~k~v~qy~gh~K~~vc~~ 307 (311)
T KOG0315|consen 254 LTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLS--------AGKEVRQYQGHHKAAVCVA 307 (311)
T ss_pred eecCCceEEeeeeccCccEEEecCCCCceeecccc--------cCceeeecCCcccccEEEE
Confidence 89999999999999 99999999999999999998 6678899999987766665
No 168
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.95 E-value=3.5e-28 Score=282.05 Aligned_cols=206 Identities=16% Similarity=0.113 Sum_probs=154.6
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+......+.. ...+|+||+|++|.++++.. .+++..++.++.||+.||
T Consensus 94 ~~i~~~~~hp~iv~~~~~~~~~~~----------------~~lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL 155 (371)
T cd05622 94 RDIMAFANSPWVVQLFYAFQDDRY----------------LYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLAL 155 (371)
T ss_pred HHHHHhCCCCCCCeEEEEEEcCCE----------------EEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHH
Confidence 456777899999986655332211 12489999999999999764 467778999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 156 ~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~--------------------------------------- 196 (371)
T cd05622 156 DAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--------------------------------------- 196 (371)
T ss_pred HHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCC---------------------------------------
Confidence 99999999999999999999999999999999986643100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......+||+.|+|||
T Consensus 197 ---------------------------------------------------------------~~~~~~~~gt~~y~aPE 213 (371)
T cd05622 197 ---------------------------------------------------------------MVRCDTAVGTPDYISPE 213 (371)
T ss_pred ---------------------------------------------------------------cccccCcccCccccCHH
Confidence 00001457999999999
Q ss_pred cccCC----CCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccC--CCCCCCCCCChhHHHHHHhccccCCCC-
Q 001548 503 ELSGG----VCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDR--ILPPSFLSENPKEAGFCLWQLHPEPLS- 572 (1056)
Q Consensus 503 ~l~~~----~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~--~lp~~~~~~~~~~~~li~~lL~~dP~~- 572 (1056)
++.+. .++.++|||||||+||||++| |................ ...+.....++.+.+||.+||..+|.+
T Consensus 214 ~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~ 293 (371)
T cd05622 214 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRL 293 (371)
T ss_pred HHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhc
Confidence 99763 378999999999999999986 44333322222222221 122344467888999999999854443
Q ss_pred -CCCHHHHhhhhhhhhh
Q 001548 573 -RPTTREILQSEVTNEF 588 (1056)
Q Consensus 573 -Rpt~~eil~~~~~~~~ 588 (1056)
|+++.+|++|+||...
T Consensus 294 ~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 294 GRNGVEEIKRHLFFKND 310 (371)
T ss_pred CCCCHHHHhcCcccCCC
Confidence 7899999999999764
No 169
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.95 E-value=8.1e-28 Score=264.30 Aligned_cols=206 Identities=18% Similarity=0.161 Sum_probs=157.9
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....||||+.+......+... ..++++++|++|.+++...+ .+++..++.+++||+.||
T Consensus 55 ~~~l~~l~~~~i~~~~~~~~~~~~~----------------~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~l 117 (263)
T cd06625 55 IQLLKNLQHERIVQYYGCLRDDETL----------------SIFMEYMPGGSVKDQLKAYG-ALTETVTRKYTRQILEGV 117 (263)
T ss_pred HHHHHhCCCCCeeeeEEEEccCCeE----------------EEEEEECCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHH
Confidence 4567788999998765554322211 13788999999999997754 466778999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||+.||+||||||+||+++.++.++|+|||+++.......
T Consensus 118 ~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~-------------------------------------- 159 (263)
T cd06625 118 EYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICS-------------------------------------- 159 (263)
T ss_pred HHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccc--------------------------------------
Confidence 999999999999999999999999999999998865431000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.........|+.+|+|||
T Consensus 160 --------------------------------------------------------------~~~~~~~~~~~~~y~aPE 177 (263)
T cd06625 160 --------------------------------------------------------------SGTGMKSVTGTPYWMSPE 177 (263)
T ss_pred --------------------------------------------------------------ccccccCCCcCccccCcc
Confidence 000001345778899999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCCCC---cHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGRFD---SERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~f~---~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~ei 579 (1056)
.+.+..++.++|||||||++|||+++.. .................++.....++.+.+|+.+||..+|.+|||+.++
T Consensus 178 ~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l 257 (263)
T cd06625 178 VISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEEL 257 (263)
T ss_pred eeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence 9999889999999999999999998733 3223333333333333334444667889999999999999999999999
Q ss_pred hhhhhh
Q 001548 580 LQSEVT 585 (1056)
Q Consensus 580 l~~~~~ 585 (1056)
++|+||
T Consensus 258 l~~~~~ 263 (263)
T cd06625 258 LRHFFV 263 (263)
T ss_pred hhCCCC
Confidence 999997
No 170
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=6.2e-26 Score=244.39 Aligned_cols=296 Identities=14% Similarity=0.123 Sum_probs=236.8
Q ss_pred ccccccccccccccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEe
Q 001548 719 TRADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAG 798 (1056)
Q Consensus 719 ~~~~~~~l~gh~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~ 798 (1056)
+...-+++..|.+.|--+.| +.++....+++.|.+..+|....-.-. .+ .+.+.+|..+|.-+.|+||.++|++|+
T Consensus 213 p~qt~qil~~htdEVWfl~F--S~nGkyLAsaSkD~Taiiw~v~~d~~~-kl-~~tlvgh~~~V~yi~wSPDdryLlaCg 288 (519)
T KOG0293|consen 213 PSQTWQILQDHTDEVWFLQF--SHNGKYLASASKDSTAIIWIVVYDVHF-KL-KKTLVGHSQPVSYIMWSPDDRYLLACG 288 (519)
T ss_pred CchhhhhHhhCCCcEEEEEE--cCCCeeEeeccCCceEEEEEEecCcce-ee-eeeeecccCceEEEEECCCCCeEEecC
Confidence 34456788899998877766 334444458889999999986432221 12 225679999999999999999999999
Q ss_pred CCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCC-CcEEEE
Q 001548 799 VSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHE-KRAWSV 877 (1056)
Q Consensus 799 ~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~-~~V~sv 877 (1056)
.|..+++||..+... ......++...+.|++|.|+ +..+++|+-|++|..||+. |..+..+++-. ..|+++
T Consensus 289 ~~e~~~lwDv~tgd~------~~~y~~~~~~S~~sc~W~pD-g~~~V~Gs~dr~i~~wdlD-gn~~~~W~gvr~~~v~dl 360 (519)
T KOG0293|consen 289 FDEVLSLWDVDTGDL------RHLYPSGLGFSVSSCAWCPD-GFRFVTGSPDRTIIMWDLD-GNILGNWEGVRDPKVHDL 360 (519)
T ss_pred chHheeeccCCcchh------hhhcccCcCCCcceeEEccC-CceeEecCCCCcEEEecCC-cchhhcccccccceeEEE
Confidence 999999999987321 11111234678999999999 8889999999999999995 55566666543 469999
Q ss_pred EEecCCCCEEEEEeCCCcEEEEECCCCceeEEEeCCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCC
Q 001548 878 DFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHE 957 (1056)
Q Consensus 878 ~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~ 957 (1056)
+..+ ||.++++...|..|++++..+......+....+|++.+.+.++. ++++.-.+..+++||+...+. +..+.||.
T Consensus 361 ait~-Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k-~~LvnL~~qei~LWDl~e~~l-v~kY~Ghk 437 (519)
T KOG0293|consen 361 AITY-DGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGK-LALVNLQDQEIHLWDLEENKL-VRKYFGHK 437 (519)
T ss_pred EEcC-CCcEEEEEecccceeeechhhhhhhccccccCceeEEEEcCCCc-EEEEEcccCeeEEeecchhhH-HHHhhccc
Confidence 9999 99999999999999999999888877778889999999999997 777788899999999995443 56778887
Q ss_pred CC--eEEEEEc--CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCC-CEE
Q 001548 958 KA--VSYVKFL--DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSD-CWL 1032 (1056)
Q Consensus 958 ~~--V~~l~fs--~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g-~~l 1032 (1056)
.. |-.-+|. +..+++|||.|+.|+||+.. +++++.++.||+..|.+++ |.|.. ..+
T Consensus 438 q~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~--------sgkll~~LsGHs~~vNcVs-----------wNP~~p~m~ 498 (519)
T KOG0293|consen 438 QGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRI--------SGKLLAVLSGHSKTVNCVS-----------WNPADPEMF 498 (519)
T ss_pred ccceEEEeccCCCCcceEEecCCCceEEEEEcc--------CCceeEeecCCcceeeEEe-----------cCCCCHHHh
Confidence 64 3344554 56789999999999999998 6789999999999998888 66655 456
Q ss_pred EEEEcCCcEEEEeCCC
Q 001548 1033 LLVCFDFTTLSFRTSW 1048 (1056)
Q Consensus 1033 ~s~s~D~~v~iW~v~~ 1048 (1056)
|++|.|+||+||.++-
T Consensus 499 ASasDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 499 ASASDDGTIRIWGPSD 514 (519)
T ss_pred hccCCCCeEEEecCCc
Confidence 8999999999998763
No 171
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.95 E-value=7.7e-29 Score=300.16 Aligned_cols=256 Identities=16% Similarity=0.091 Sum_probs=187.7
Q ss_pred HHHhhhccccceeeeCCCCC-ccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcC
Q 001548 214 FFVKTTLKGKGIVCRGPPLN-AFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGAR 292 (1056)
Q Consensus 214 ~~~k~~~~g~Gvv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (1056)
+-.+-+.+=+|.||-+.+.| |.-..-.++..+...+..++.=.. -.+.+...+|||+|+--.+-+....
T Consensus 1239 rg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~e----Em~vlE~lnHpNlV~YyGVEvHRek------ 1308 (1509)
T KOG4645|consen 1239 RGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAE----EMKVLEGLNHPNLVRYYGVEVHREK------ 1308 (1509)
T ss_pred cccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHH----HHHHHHhccCccccccCceeecHHH------
Confidence 33444455568899887642 111122333333333333433311 1456677799999974333221111
Q ss_pred CCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeC
Q 001548 293 TGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIG 372 (1056)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~D 372 (1056)
-++.||||+||+|.+++.. ++..++.-.+.|..|++.||.|||++|||||||||+||+|+.+|.+||.|
T Consensus 1309 ----------v~IFMEyC~~GsLa~ll~~-gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~D 1377 (1509)
T KOG4645|consen 1309 ----------VYIFMEYCEGGSLASLLEH-GRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGD 1377 (1509)
T ss_pred ----------HHHHHHHhccCcHHHHHHh-cchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeec
Confidence 2348999999999998854 45567767888999999999999999999999999999999999999999
Q ss_pred cchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCC
Q 001548 373 PIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIP 452 (1056)
Q Consensus 373 fgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~ 452 (1056)
||.|..+..+..
T Consensus 1378 FGsa~ki~~~~~-------------------------------------------------------------------- 1389 (1509)
T KOG4645|consen 1378 FGSAVKIKNNAQ-------------------------------------------------------------------- 1389 (1509)
T ss_pred ccceeEecCchh--------------------------------------------------------------------
Confidence 999877652100
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCC---CCccchhHHHHHHHHHHhCCC
Q 001548 453 HSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV---CTTSSNIYSLGVLFFELFGRF 529 (1056)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~---~t~~sDIwSLGvlL~eLlt~f 529 (1056)
.-...+...+||+.|||||++.+.. ..-+.|||||||+..||+||-
T Consensus 1390 -------------------------------~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGk 1438 (1509)
T KOG4645|consen 1390 -------------------------------TMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGK 1438 (1509)
T ss_pred -------------------------------cCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCC
Confidence 0012334789999999999999833 567999999999999999986
Q ss_pred CcHH---HHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001548 530 DSER---ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1056)
Q Consensus 530 ~~~~---~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~ 589 (1056)
.++. +..+.|-++-.+..|+.+...+++..+||.+||..||+.|+++.|+|.|-|-....
T Consensus 1439 rPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~ 1501 (1509)
T KOG4645|consen 1439 RPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCT 1501 (1509)
T ss_pred CchhhccchhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccccc
Confidence 6654 45556666666777777777899999999999999999999999999999876543
No 172
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.95 E-value=1.1e-27 Score=264.15 Aligned_cols=246 Identities=16% Similarity=0.194 Sum_probs=170.3
Q ss_pred hHHHhhhcc--ccceeeeCCCCC-ccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCC
Q 001548 213 EFFVKTTLK--GKGIVCRGPPLN-AFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1056)
Q Consensus 213 ~~~~k~~~~--g~Gvv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1056)
.|.+.+.++ |.|.||++...+ +..+ ..+..+.....+..........+....||||+.+..........
T Consensus 10 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~------~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~-- 81 (267)
T cd06645 10 DFELIQRIGSGTYGDVYKARNVNTGELA------AIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKL-- 81 (267)
T ss_pred HHHHHHHhCCCCCeEEEEEEEcCCCcEE------EEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEE--
Confidence 566655554 789999987521 1111 11111111111212222234567777999999876654322211
Q ss_pred CcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEE
Q 001548 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1056)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vk 369 (1056)
..+|+|++|++|.++++..+ .+++.+++.++.||+.||.|||++||+|+||||+||+++.++.+|
T Consensus 82 --------------~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~ 146 (267)
T cd06645 82 --------------WICMEFCGGGSLQDIYHVTG-PLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVK 146 (267)
T ss_pred --------------EEEEeccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEE
Confidence 13899999999999997765 467779999999999999999999999999999999999999999
Q ss_pred EeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCccccccccccccc
Q 001548 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1056)
Q Consensus 370 l~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~ 449 (1056)
|+|||++.......
T Consensus 147 l~dfg~~~~~~~~~------------------------------------------------------------------ 160 (267)
T cd06645 147 LADFGVSAQITATI------------------------------------------------------------------ 160 (267)
T ss_pred ECcceeeeEccCcc------------------------------------------------------------------
Confidence 99999886543100
Q ss_pred CCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCccccc---CCCCCccchhHHHHHHHHHHh
Q 001548 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS---GGVCTTSSNIYSLGVLFFELF 526 (1056)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~---~~~~t~~sDIwSLGvlL~eLl 526 (1056)
.......||..|+|||.+. ...++.++|||||||++|+|+
T Consensus 161 -------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~ 203 (267)
T cd06645 161 -------------------------------------AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELA 203 (267)
T ss_pred -------------------------------------cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHh
Confidence 0001346888999999985 456889999999999999999
Q ss_pred CCCCcH---HHHHHHHHhhccCCCCCCC---CCCChhHHHHHHhccccCCCCCCCHHHHhhhhh
Q 001548 527 GRFDSE---RALAAAMSDLRDRILPPSF---LSENPKEAGFCLWQLHPEPLSRPTTREILQSEV 584 (1056)
Q Consensus 527 t~f~~~---~~~~~~~~~~~~~~lp~~~---~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~ 584 (1056)
++..+. ...............++.. ...+..+.+|+.+||..+|.+||++.+|++|||
T Consensus 204 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 204 ELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred cCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 863221 1112222222222222222 235677899999999999999999999999998
No 173
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.95 E-value=8.9e-28 Score=279.00 Aligned_cols=156 Identities=15% Similarity=0.159 Sum_probs=118.0
Q ss_pred CCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccc
Q 001548 326 GKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMF 405 (1056)
Q Consensus 326 ~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (1056)
++...++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 209 l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~-------------------- 268 (374)
T cd05106 209 LDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNY-------------------- 268 (374)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcce--------------------
Confidence 566678999999999999999999999999999999999999999999998764310000
Q ss_pred cccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccc
Q 001548 406 TTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQ 485 (1056)
Q Consensus 406 ~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (1056)
T Consensus 269 -------------------------------------------------------------------------------- 268 (374)
T cd05106 269 -------------------------------------------------------------------------------- 268 (374)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHH
Q 001548 486 STSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGF 561 (1056)
Q Consensus 486 ~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~l 561 (1056)
.......++..|+|||++.+..++.++|||||||+||||++ | |............+.....++.....++++.++
T Consensus 269 -~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 347 (374)
T cd05106 269 -VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSI 347 (374)
T ss_pred -eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHH
Confidence 00001234567999999998899999999999999999995 5 333322222233333332222233457889999
Q ss_pred HHhccccCCCCCCCHHHHhhh
Q 001548 562 CLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 562 i~~lL~~dP~~Rpt~~eil~~ 582 (1056)
+.+||+.||.+||++.+|++.
T Consensus 348 i~~cl~~dp~~RPs~~~l~~~ 368 (374)
T cd05106 348 MKMCWNLEPTERPTFSQISQL 368 (374)
T ss_pred HHHHcCCChhhCcCHHHHHHH
Confidence 999999999999999999874
No 174
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=1.6e-26 Score=267.32 Aligned_cols=257 Identities=16% Similarity=0.285 Sum_probs=210.3
Q ss_pred cceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCC
Q 001548 732 LFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNAL 811 (1056)
Q Consensus 732 ~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~ 811 (1056)
-|..+.|+. +..-+|++-..|.|.+|||..+.+. ..|..|.++|..+.|||++.+|++||.|.+|+||++.+
T Consensus 11 RvKglsFHP--~rPwILtslHsG~IQlWDYRM~tli-----~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~- 82 (1202)
T KOG0292|consen 11 RVKGLSFHP--KRPWILTSLHSGVIQLWDYRMGTLI-----DRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKT- 82 (1202)
T ss_pred cccceecCC--CCCEEEEeecCceeeeehhhhhhHH-----hhhhccCCccceeeecCCCCeEEecCCccEEEEEeccc-
Confidence 344555532 2234678889999999998654332 25779999999999999999999999999999999984
Q ss_pred CCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEe
Q 001548 812 FNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGS 891 (1056)
Q Consensus 812 ~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs 891 (1056)
..+.....+|-..|..+.|++. -.+++|+|.|.||+||+..+++++..++||..-|.|..|+| ....++|+|
T Consensus 83 ------rrclftL~GHlDYVRt~~FHhe-yPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhp-tEDlIVSaS 154 (1202)
T KOG0292|consen 83 ------RRCLFTLLGHLDYVRTVFFHHE-YPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHP-TEDLIVSAS 154 (1202)
T ss_pred ------ceehhhhccccceeEEeeccCC-CceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCC-ccceEEEec
Confidence 3445566799999999999997 78999999999999999999999999999999999999999 778999999
Q ss_pred CCCcEEEEECCC---C------------------------ceeEE--Ee-CCCCeEEEEEccCCCcEEEEEeCCCeEEEE
Q 001548 892 DDCSVKLWNINE---K------------------------NSLAT--IK-NIANVCCVQFSAHSSHLLAFGSADYRTYCY 941 (1056)
Q Consensus 892 ~Dg~V~IWDlr~---~------------------------~~~~~--~~-~~~~V~sv~fsp~~~~~lasGs~Dg~V~lw 941 (1056)
-|.+|++||+.. + .++.. +. |.-+|+.++|+|.-+ ++++|++|..|++|
T Consensus 155 LDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlp-liVSG~DDRqVKlW 233 (1202)
T KOG0292|consen 155 LDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLP-LIVSGADDRQVKLW 233 (1202)
T ss_pred ccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcc-eEEecCCcceeeEE
Confidence 999999999842 0 01111 11 456799999999987 99999999999999
Q ss_pred EcCCCCc-ceEEecCCCCCeEEEEEcC-CCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEE
Q 001548 942 DLRNARA-PWCVLAGHEKAVSYVKFLD-SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGIC 1013 (1056)
Q Consensus 942 Dlr~~~~-~~~~l~gH~~~V~~l~fs~-~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls 1013 (1056)
.+...+. .+.+..||.+.|+++-|+| .++|+|.|.|++|+|||+. +.+++.+|.-..+.-..++
T Consensus 234 rmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~--------kRt~v~tfrrendRFW~la 299 (1202)
T KOG0292|consen 234 RMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMT--------KRTSVQTFRRENDRFWILA 299 (1202)
T ss_pred EeccccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecc--------cccceeeeeccCCeEEEEE
Confidence 9876554 3567899999999999994 5779999999999999998 4456777754444443333
No 175
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=9.7e-27 Score=237.45 Aligned_cols=244 Identities=22% Similarity=0.340 Sum_probs=203.3
Q ss_pred EEEEEcCC-CCEEEEEe-------CCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEE
Q 001548 783 CSISFDRD-EDHFAAAG-------VSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVK 854 (1056)
Q Consensus 783 ~sv~fspd-g~~latg~-------~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~ 854 (1056)
.++.|+|- .++||.+. ..|++.|.++... ..........-...+.+|+|+++..+.+++++.||+++
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~-----~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLr 86 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDP-----KGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLR 86 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCC-----CCeEEEEeeecccceeEeeecCCCcceEEEEecCceEE
Confidence 56788883 34444333 3688888888521 12222333455778999999999999999999999999
Q ss_pred EEEcCC-CceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEEE
Q 001548 855 LWDACT-GQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFG 932 (1056)
Q Consensus 855 lWD~~t-~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~lasG 932 (1056)
|||+.. ..++..|++|..+|.+++|++.+...++++|.|++||+||...++.+++|. |..-|...+|+|..+++++++
T Consensus 87 l~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~ 166 (311)
T KOG0277|consen 87 LFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASA 166 (311)
T ss_pred EeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEc
Confidence 999753 468999999999999999999999999999999999999999999999997 567799999999999999999
Q ss_pred eCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc--CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEE
Q 001548 933 SADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL--DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKV 1010 (1056)
Q Consensus 933 s~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs--~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv 1010 (1056)
|.|+++++||+|.....+. +..|...+.++.|+ +...++||+.|+.||.||+++ -..++..+.||.=.|.
T Consensus 167 Sgd~~l~lwdvr~~gk~~~-i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~-------~r~pl~eL~gh~~AVR 238 (311)
T KOG0277|consen 167 SGDGTLRLWDVRSPGKFMS-IEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRN-------LRTPLFELNGHGLAVR 238 (311)
T ss_pred cCCceEEEEEecCCCceeE-EEeccceeEeecccccCCcEEEecCCCceEEEEehhh-------ccccceeecCCceEEE
Confidence 9999999999998876544 88899999999998 788899999999999999994 3467889999998887
Q ss_pred EEEecCCcceeeEEeeCCC-CEEEEEEcCCcEEEEeCCCCe
Q 001548 1011 GICRLEHNLFPFTIFNLSD-CWLLLVCFDFTTLSFRTSWGC 1050 (1056)
Q Consensus 1011 ~ls~~~~~~~~~~~~s~~g-~~l~s~s~D~~v~iW~v~~~~ 1050 (1056)
.+. +||.. ..|+++++|.+++||+...+.
T Consensus 239 kvk-----------~Sph~~~lLaSasYDmT~riw~~~~~d 268 (311)
T KOG0277|consen 239 KVK-----------FSPHHASLLASASYDMTVRIWDPERQD 268 (311)
T ss_pred EEe-----------cCcchhhHhhhccccceEEecccccch
Confidence 766 55554 445889999999999987654
No 176
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.95 E-value=1.4e-27 Score=272.27 Aligned_cols=214 Identities=17% Similarity=0.196 Sum_probs=152.3
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~QIl~g 341 (1056)
..+++...||||+.+......+... ..+|+|+++++|.+++... ...+++..++.++.||+.|
T Consensus 50 ~~~l~~l~hpniv~~~~~~~~~~~~----------------~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~ 113 (327)
T cd08227 50 LHVSKLFNHPNIVPYRATFIADNEL----------------WVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKA 113 (327)
T ss_pred HHHHHhcCCCCeeeEEEEEEECCEE----------------EEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHH
Confidence 4567777999999876664433221 2489999999999999654 3347788999999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|+|||++||+||||||+|||++.++.++++||+.+........
T Consensus 114 L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~------------------------------------- 156 (327)
T cd08227 114 LDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ------------------------------------- 156 (327)
T ss_pred HHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccc-------------------------------------
Confidence 9999999999999999999999999999999986543321000
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
... ...++ -....++..|+||
T Consensus 157 ------------------------------~~~--------~~~~~---------------------~~~~~~~~~y~aP 177 (327)
T cd08227 157 ------------------------------RLR--------VVHDF---------------------PKYSVKVLPWLSP 177 (327)
T ss_pred ------------------------------ccc--------ccccc---------------------cccccceecccCh
Confidence 000 00000 0023466779999
Q ss_pred ccccC--CCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCC--------C---------------------
Q 001548 502 EELSG--GVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRI--------L--------------------- 547 (1056)
Q Consensus 502 E~l~~--~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~--------l--------------------- 547 (1056)
|++.+ ..++.++|||||||++|||+++ |................. .
T Consensus 178 E~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (327)
T cd08227 178 EVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGES 257 (327)
T ss_pred HHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcc
Confidence 99986 4689999999999999999986 322211111111111100 0
Q ss_pred ---------------CCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001548 548 ---------------PPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1056)
Q Consensus 548 ---------------p~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~ 588 (1056)
.+.....++.+.+|+.+||+.||++|||+.++++||||...
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~ 313 (327)
T cd08227 258 TTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 313 (327)
T ss_pred cccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhc
Confidence 00111345678899999999999999999999999999764
No 177
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.95 E-value=7.6e-28 Score=268.84 Aligned_cols=205 Identities=15% Similarity=0.157 Sum_probs=156.6
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~QIl~g 341 (1056)
..+++...||||+.+......+.. ...+|+|++|++|.+++.... ..+++..+..++.||+.|
T Consensus 51 ~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~ 114 (285)
T cd05605 51 KQILEKVNSRFVVSLAYAYETKDA----------------LCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCG 114 (285)
T ss_pred HHHHHhcCCCCEeeeeeeecCCCe----------------EEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHH
Confidence 456778889999875544322111 124899999999999886543 457888999999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|.|||++||+||||||+||+++.++.++++|||+++.....
T Consensus 115 l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~--------------------------------------- 155 (285)
T cd05605 115 LEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG--------------------------------------- 155 (285)
T ss_pred HHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC---------------------------------------
Confidence 99999999999999999999999999999999987653200
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
......+||+.|+||
T Consensus 156 -----------------------------------------------------------------~~~~~~~~~~~y~aP 170 (285)
T cd05605 156 -----------------------------------------------------------------ETIRGRVGTVGYMAP 170 (285)
T ss_pred -----------------------------------------------------------------CccccccCCCCccCc
Confidence 000134688999999
Q ss_pred ccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHH---HHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCC-
Q 001548 502 EELSGGVCTTSSNIYSLGVLFFELFGR---FDSERAL---AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP- 574 (1056)
Q Consensus 502 E~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~---~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rp- 574 (1056)
|++.+..++.++||||+||++|||++| |.+.... ......+... .+......++.+.+||.+||+.||.+||
T Consensus 171 E~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~R~~ 249 (285)
T cd05605 171 EVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKED-QEEYSEKFSEAARSICRQLLTKDPGFRLG 249 (285)
T ss_pred HHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhc-ccccCcccCHHHHHHHHHHccCCHHHhcC
Confidence 999998899999999999999999986 4332211 1122222221 1222334678889999999999999999
Q ss_pred ----CHHHHhhhhhhhhh
Q 001548 575 ----TTREILQSEVTNEF 588 (1056)
Q Consensus 575 ----t~~eil~~~~~~~~ 588 (1056)
++.++++||||...
T Consensus 250 ~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05605 250 CRGEGAEEVKAHPFFRTA 267 (285)
T ss_pred CCCCCHHHHhcCcCccCC
Confidence 89999999999864
No 178
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.95 E-value=2e-28 Score=268.25 Aligned_cols=242 Identities=21% Similarity=0.266 Sum_probs=169.7
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCCchhH-HHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcc
Q 001548 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAA-LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1056)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1056)
.+|.|+||++...+.-. ....+............ ........+++..||||+.+......+....
T Consensus 9 ~G~~g~v~~~~~~~~~~----~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~---------- 74 (260)
T PF00069_consen 9 SGGFGTVYKAKNKKNGQ----KVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLY---------- 74 (260)
T ss_dssp EESSEEEEEEEETTTTE----EEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEE----------
T ss_pred eCCCEEEEEEEECCCCe----EEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccc----------
Confidence 45889999998742211 01111111111111111 1122455677778999998776655422221
Q ss_pred cccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhc
Q 001548 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1056)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~ 378 (1056)
.+|+++.|++|.++|... ..++..++..++.||+.||+|||++||+|+||||+||+++.++.++++|||++..
T Consensus 75 ------~v~~~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~ 147 (260)
T PF00069_consen 75 ------IVMEYCPGGSLQDYLQKN-KPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVK 147 (260)
T ss_dssp ------EEEEEETTEBHHHHHHHH-SSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEE
T ss_pred ------cccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 489999999999999843 3567879999999999999999999999999999999999999999999998865
Q ss_pred ccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCc
Q 001548 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1056)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~ 458 (1056)
....
T Consensus 148 ~~~~---------------------------------------------------------------------------- 151 (260)
T PF00069_consen 148 LSEN---------------------------------------------------------------------------- 151 (260)
T ss_dssp STST----------------------------------------------------------------------------
T ss_pred cccc----------------------------------------------------------------------------
Confidence 3100
Q ss_pred ccccccCCCCCCCCCCCCccccccccccccccccccCCCccCccccc-CCCCCccchhHHHHHHHHHHhCC---CCcH--
Q 001548 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS-GGVCTTSSNIYSLGVLFFELFGR---FDSE-- 532 (1056)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-~~~~t~~sDIwSLGvlL~eLlt~---f~~~-- 532 (1056)
........+|+.|+|||++. +..++.++|||||||++|+|+++ |...
T Consensus 152 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~ 204 (260)
T PF00069_consen 152 ---------------------------NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNS 204 (260)
T ss_dssp ---------------------------TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH
T ss_pred ---------------------------ccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 00111456888999999998 78899999999999999999986 3332
Q ss_pred HHHHHHHHhhccCCCCCCC---CCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 533 RALAAAMSDLRDRILPPSF---LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 533 ~~~~~~~~~~~~~~lp~~~---~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
......+.......++... ....+.+.+|+.+||+.||++||++.++++||||
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 205 DDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred hhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 1222222222222111111 1223788999999999999999999999999997
No 179
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.95 E-value=8.2e-28 Score=267.79 Aligned_cols=204 Identities=17% Similarity=0.154 Sum_probs=151.0
Q ss_pred hhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Q 001548 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (1056)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ 343 (1056)
.++....||+++.+......+... ..+|+|+.|++|.+++...+ .+++..+..++.||+.||+
T Consensus 49 ~~~~~~~~~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~i~~~~-~l~~~~~~~i~~qi~~al~ 111 (279)
T cd05633 49 SLVSTGDCPFIVCMTYAFHTPDKL----------------CFILDLMNGGDLHYHLSQHG-VFSEKEMRFYATEIILGLE 111 (279)
T ss_pred HHHhhCCCCcEeEEEEEEecCCeE----------------EEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHH
Confidence 345556788887654443221111 13899999999999997665 4677799999999999999
Q ss_pred HhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccc
Q 001548 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (1056)
Q Consensus 344 ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 423 (1056)
|||++||+||||||+|||++.++.+|++|||++.......
T Consensus 112 ~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~---------------------------------------- 151 (279)
T cd05633 112 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---------------------------------------- 151 (279)
T ss_pred HHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC----------------------------------------
Confidence 9999999999999999999999999999999885432100
Q ss_pred cccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCccc
Q 001548 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (1056)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 503 (1056)
.....||..|+|||.
T Consensus 152 -----------------------------------------------------------------~~~~~~~~~y~aPE~ 166 (279)
T cd05633 152 -----------------------------------------------------------------PHASVGTHGYMAPEV 166 (279)
T ss_pred -----------------------------------------------------------------ccCcCCCcCccCHHH
Confidence 002357889999999
Q ss_pred ccC-CCCCccchhHHHHHHHHHHhCCCCcHH----HHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCC----
Q 001548 504 LSG-GVCTTSSNIYSLGVLFFELFGRFDSER----ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP---- 574 (1056)
Q Consensus 504 l~~-~~~t~~sDIwSLGvlL~eLlt~f~~~~----~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rp---- 574 (1056)
+.+ ..++.++|||||||++|||+++..++. ..............+......++++.+|+.+||+.||++||
T Consensus 167 ~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 246 (279)
T cd05633 167 LQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLG 246 (279)
T ss_pred hcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCC
Confidence 874 568999999999999999998632221 01111111111111122234678899999999999999999
Q ss_pred -CHHHHhhhhhhhhhh
Q 001548 575 -TTREILQSEVTNEFQ 589 (1056)
Q Consensus 575 -t~~eil~~~~~~~~~ 589 (1056)
++.++++||||....
T Consensus 247 ~~~~~~~~h~~~~~~~ 262 (279)
T cd05633 247 RGAQEVKEHVFFKGID 262 (279)
T ss_pred CCHHHHHhCccccCCC
Confidence 699999999998853
No 180
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.95 E-value=8.7e-28 Score=278.99 Aligned_cols=213 Identities=17% Similarity=0.196 Sum_probs=153.9
Q ss_pred hhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Q 001548 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~g 341 (1056)
...+++..+||||+.+......... .++.....+|+|+. ++|.+++...+ .++...++.+++||+.|
T Consensus 49 E~~~l~~l~h~niv~~~~~~~~~~~-----------~~~~~~~lv~e~~~-~~l~~~~~~~~-~l~~~~~~~~~~qi~~a 115 (372)
T cd07853 49 ELKMLCFFKHDNVLSALDILQPPHI-----------DPFEEIYVVTELMQ-SDLHKIIVSPQ-PLSSDHVKVFLYQILRG 115 (372)
T ss_pred HHHHHHhCCCCCcCCHhheecCCCc-----------cccceEEEEeeccc-cCHHHHHhcCC-CCCHHHHHHHHHHHHHH
Confidence 3456788899999987766432211 01111224677776 58988886554 57777999999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 116 L~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~-------------------------------------- 157 (372)
T cd07853 116 LKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE-------------------------------------- 157 (372)
T ss_pred HHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCc--------------------------------------
Confidence 999999999999999999999999999999999886533100
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
....+..++|++|+||
T Consensus 158 ----------------------------------------------------------------~~~~~~~~~~~~y~aP 173 (372)
T cd07853 158 ----------------------------------------------------------------SKHMTQEVVTQYYRAP 173 (372)
T ss_pred ----------------------------------------------------------------cccCCCCCcCCCcCCH
Confidence 0001134678999999
Q ss_pred ccccCC-CCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHH----------------------h-hccCCCCC-----
Q 001548 502 EELSGG-VCTTSSNIYSLGVLFFELFGR---FDSERALAAAMS----------------------D-LRDRILPP----- 549 (1056)
Q Consensus 502 E~l~~~-~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~----------------------~-~~~~~lp~----- 549 (1056)
|++.+. .++.++|||||||++|||++| |........... . ......++
T Consensus 174 E~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (372)
T cd07853 174 EILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVL 253 (372)
T ss_pred HHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHh
Confidence 999884 479999999999999999986 433221111100 0 01111111
Q ss_pred --CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001548 550 --SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1056)
Q Consensus 550 --~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~ 589 (1056)
.....++.+.+||.+||++||.+|||+.|+|+||||....
T Consensus 254 ~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~ 295 (372)
T cd07853 254 YTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGR 295 (372)
T ss_pred cccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCc
Confidence 1223467888999999999999999999999999998753
No 181
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.95 E-value=2.6e-27 Score=265.20 Aligned_cols=208 Identities=15% Similarity=0.156 Sum_probs=156.8
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...++...|||++.+......+... ..+|+|++|++|..++.+....+++..++.++.||+.||
T Consensus 60 ~~~l~~l~h~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l 123 (292)
T cd06644 60 IEILATCNHPYIVKLLGAFYWDGKL----------------WIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEAL 123 (292)
T ss_pred HHHHHhCCCCcEeeeEEEEEeCCeE----------------EEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence 4467778899998866654332211 248999999999998876666788889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus 124 ~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~--------------------------------------- 164 (292)
T cd06644 124 QYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL--------------------------------------- 164 (292)
T ss_pred HHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccccc---------------------------------------
Confidence 99999999999999999999999999999999875432100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......+++.|+|||
T Consensus 165 ----------------------------------------------------------------~~~~~~~~~~~y~aPE 180 (292)
T cd06644 165 ----------------------------------------------------------------QRRDSFIGTPYWMAPE 180 (292)
T ss_pred ----------------------------------------------------------------cccceecCCccccCce
Confidence 0001345778899999
Q ss_pred ccc-----CCCCCccchhHHHHHHHHHHhCCCCc---HHHHHHHHHhhccCCCC--CCCCCCChhHHHHHHhccccCCCC
Q 001548 503 ELS-----GGVCTTSSNIYSLGVLFFELFGRFDS---ERALAAAMSDLRDRILP--PSFLSENPKEAGFCLWQLHPEPLS 572 (1056)
Q Consensus 503 ~l~-----~~~~t~~sDIwSLGvlL~eLlt~f~~---~~~~~~~~~~~~~~~lp--~~~~~~~~~~~~li~~lL~~dP~~ 572 (1056)
++. ...++.++|||||||++|||+++..+ .......... .....+ ......+.++.+|+.+||+.||.+
T Consensus 181 ~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 259 (292)
T cd06644 181 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI-AKSEPPTLSQPSKWSMEFRDFLKTALDKHPET 259 (292)
T ss_pred eeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHH-hcCCCccCCCCcccCHHHHHHHHHHhcCCccc
Confidence 985 34578899999999999999987322 2222222222 222111 223355678999999999999999
Q ss_pred CCCHHHHhhhhhhhhhhh
Q 001548 573 RPTTREILQSEVTNEFQE 590 (1056)
Q Consensus 573 Rpt~~eil~~~~~~~~~~ 590 (1056)
||++.++++||||.....
T Consensus 260 Rp~~~~il~~~~~~~~~~ 277 (292)
T cd06644 260 RPSAAQLLEHPFVSSVTS 277 (292)
T ss_pred CcCHHHHhcCcccccccc
Confidence 999999999999976543
No 182
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.95 E-value=1.8e-27 Score=276.69 Aligned_cols=157 Identities=15% Similarity=0.167 Sum_probs=118.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccc
Q 001548 325 KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEM 404 (1056)
Q Consensus 325 ~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (1056)
.++...++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 210 ~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~------------------- 270 (375)
T cd05104 210 ALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY------------------- 270 (375)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccc-------------------
Confidence 3566788999999999999999999999999999999999999999999998764410000
Q ss_pred ccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCcccccccc
Q 001548 405 FTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQ 484 (1056)
Q Consensus 405 ~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (1056)
T Consensus 271 -------------------------------------------------------------------------------- 270 (375)
T cd05104 271 -------------------------------------------------------------------------------- 270 (375)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHH
Q 001548 485 QSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAG 560 (1056)
Q Consensus 485 ~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~ 560 (1056)
.......++..|+|||++.+..++.++|||||||+||||++ + |............+.....+......+.++.+
T Consensus 271 --~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 348 (375)
T cd05104 271 --VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYD 348 (375)
T ss_pred --cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHH
Confidence 00001234566999999999999999999999999999996 3 33322222233333333222223344678899
Q ss_pred HHHhccccCCCCCCCHHHHhhh
Q 001548 561 FCLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 561 li~~lL~~dP~~Rpt~~eil~~ 582 (1056)
|+.+||++||.+||++.+|++.
T Consensus 349 li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 349 IMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred HHHHHccCChhHCcCHHHHHHH
Confidence 9999999999999999999875
No 183
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=8.4e-28 Score=269.38 Aligned_cols=239 Identities=15% Similarity=0.126 Sum_probs=175.2
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCCchh---HHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCC
Q 001548 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDA---ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGV 295 (1056)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1056)
..+.+|.||..... +.+++...++..-.+.... ..-.+.++.++..+|||+|.
T Consensus 35 GHGSFGAVYfArd~-----~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntie------------------- 90 (948)
T KOG0577|consen 35 GHGSFGAVYFARDV-----RNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIE------------------- 90 (948)
T ss_pred cCCccceeEEeecc-----CccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCccc-------------------
Confidence 45688999998762 1223333233222222211 11234467789999999875
Q ss_pred Ccccc---cCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeC
Q 001548 296 PASCW---IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIG 372 (1056)
Q Consensus 296 ~~~~~---~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~D 372 (1056)
+..|| +..+.+||||-| +-.|+|.-...++.+.++..|..+.|.||.|||+.+.||||||..|||++..|.||++|
T Consensus 91 YkgCyLre~TaWLVMEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaD 169 (948)
T KOG0577|consen 91 YKGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLAD 169 (948)
T ss_pred ccceeeccchHHHHHHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeecc
Confidence 45677 557889999987 44555544455688889999999999999999999999999999999999999999999
Q ss_pred cchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCC
Q 001548 373 PIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIP 452 (1056)
Q Consensus 373 fgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~ 452 (1056)
||.+.....
T Consensus 170 FGSAsi~~P----------------------------------------------------------------------- 178 (948)
T KOG0577|consen 170 FGSASIMAP----------------------------------------------------------------------- 178 (948)
T ss_pred ccchhhcCc-----------------------------------------------------------------------
Confidence 998855430
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccC---CCCCccchhHHHHHHHHHHhCCC
Q 001548 453 HSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG---GVCTTSSNIYSLGVLFFELFGRF 529 (1056)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~---~~~t~~sDIwSLGvlL~eLlt~f 529 (1056)
..+++|||+|||||+|.. +.|+-++||||||++..||.-+-
T Consensus 179 ------------------------------------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERk 222 (948)
T KOG0577|consen 179 ------------------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 222 (948)
T ss_pred ------------------------------------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcC
Confidence 016899999999999975 77999999999999999999642
Q ss_pred Cc---HHHHHHHHHhhccCCCCCC-CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhh
Q 001548 530 DS---ERALAAAMSDLRDRILPPS-FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1056)
Q Consensus 530 ~~---~~~~~~~~~~~~~~~lp~~-~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~ 590 (1056)
++ -+...+...+.... -|.. -...+..++.|+..||++=|..|||.+++|.|+|+...+.
T Consensus 223 PPlFnMNAMSALYHIAQNe-sPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp 286 (948)
T KOG0577|consen 223 PPLFNMNAMSALYHIAQNE-SPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERP 286 (948)
T ss_pred CCccCchHHHHHHHHHhcC-CCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCC
Confidence 22 12233333332222 2211 2234677899999999999999999999999999976543
No 184
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=2.4e-28 Score=290.52 Aligned_cols=272 Identities=19% Similarity=0.183 Sum_probs=181.7
Q ss_pred CcCCccccCcceeeecccCCchhHHHhhhccccceeeeCCCCCc-c-ccccccccccccccccCCchhHHHHhhhhhhcc
Q 001548 191 LSGNMLSHGSIRTKMLSKSGFSEFFVKTTLKGKGIVCRGPPLNA-F-KERRGMIDTKAFVTTTMPSDAALKAAGAMMVAS 268 (1056)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~g~Gvv~~g~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (1056)
+.+-++..|+.+-+|..- -+-+|++.||..+..++ . +++..+..+ ......+ -...+..|..
T Consensus 27 ~~G~~~~Vg~~~v~V~~v---------LAEGGFa~VYla~~~~~~~~~AlKrm~~~------de~~L~~-v~~EI~~MK~ 90 (738)
T KOG1989|consen 27 FVGQTFTVGSHRVTVEKV---------LAEGGFAQVYLAQDVKGGKKYALKRMYVN------DEEALNA-VKREIDIMKL 90 (738)
T ss_pred CCceEEEECCEEEEEEEE---------EccCCcEEEEEEEecCCCceeeeeeeecC------CHHHHHH-HHHHHHHHHH
Confidence 345566666666554321 23468888888877544 1 111111111 1111111 2222445666
Q ss_pred CC-CCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhh
Q 001548 269 NA-SPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHH 346 (1056)
Q Consensus 269 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~QIl~gL~ylH 346 (1056)
++ |+|||..++....+.. +..++.- -.++||||.||.|-|+|+.+ ...+++.+++.||+|+++||.+||
T Consensus 91 L~gh~nIV~yidss~~~~~----~~~~~~E-----vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH 161 (738)
T KOG1989|consen 91 LSGHKNIVSYIDSSAINRS----SNNGVWE-----VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMH 161 (738)
T ss_pred hcCCCceeeEecccccccc----CCCceeE-----EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHh
Confidence 66 9999988775111110 1111111 24699999999999999754 234888899999999999999999
Q ss_pred hcC--cccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccccc
Q 001548 347 TQG--VTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFS 424 (1056)
Q Consensus 347 s~g--IvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 424 (1056)
... |||||||-+||||..+|+.||||||.+....-+.. . +
T Consensus 162 ~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~----~----------------------~------------ 203 (738)
T KOG1989|consen 162 YLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPT----S----------------------A------------ 203 (738)
T ss_pred cCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCc----c----------------------H------------
Confidence 998 99999999999999999999999998855331000 0 0
Q ss_pred ccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccc
Q 001548 425 RWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEEL 504 (1056)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l 504 (1056)
++.... ...+ ...-|+-|+|||+|
T Consensus 204 -----------------------------~e~~~v--------------------------e~eI-~k~TTp~YRsPEMI 227 (738)
T KOG1989|consen 204 -----------------------------QEVNYV--------------------------EEEI-EKYTTPQYRSPEMI 227 (738)
T ss_pred -----------------------------HHHHHH--------------------------HHHH-HhhCCccccChHHH
Confidence 000000 0001 34468889999987
Q ss_pred c---CCCCCccchhHHHHHHHHHHhC---CCCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001548 505 S---GGVCTTSSNIYSLGVLFFELFG---RFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1056)
Q Consensus 505 ~---~~~~t~~sDIwSLGvlL~eLlt---~f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~e 578 (1056)
. +.+++.|+|||+|||+||-|+. ||+... ...++....-.|.++..+..+.+||..||++||.+||++.+
T Consensus 228 Dlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg----~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Q 303 (738)
T KOG1989|consen 228 DLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG----KLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQ 303 (738)
T ss_pred hhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc----ceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHH
Confidence 4 6789999999999999999983 565532 22344444444556778899999999999999999999999
Q ss_pred Hhhhhhh
Q 001548 579 ILQSEVT 585 (1056)
Q Consensus 579 il~~~~~ 585 (1056)
++..-+.
T Consensus 304 v~~~~~~ 310 (738)
T KOG1989|consen 304 VLEEIFE 310 (738)
T ss_pred HHHHHHH
Confidence 9886543
No 185
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.95 E-value=3.4e-27 Score=262.04 Aligned_cols=252 Identities=15% Similarity=0.094 Sum_probs=171.8
Q ss_pred hHHHhhhcc--ccceeeeCCCCCcccc-ccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCC
Q 001548 213 EFFVKTTLK--GKGIVCRGPPLNAFKE-RRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1056)
Q Consensus 213 ~~~~k~~~~--g~Gvv~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1056)
.|-+++.++ |.|.||+|...+.... .......+.............-.....++....|||++.+.........
T Consensus 6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--- 82 (280)
T cd05049 6 TIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDP--- 82 (280)
T ss_pred HhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCC---
Confidence 466665555 7899999976433111 0111122222111111111112223456777889999876665433211
Q ss_pred CcCCCCCcccccCCCcccccCCCCCHHHHHHhcC-------------CCCCHHHHHHHHHHHHHHHHHhhhcCcccccCC
Q 001548 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-------------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLK 356 (1056)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-------------~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLK 356 (1056)
-..+|++++|++|.++|...+ ..++...+..++.||+.||.|||++||+|||||
T Consensus 83 -------------~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlk 149 (280)
T cd05049 83 -------------PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLA 149 (280)
T ss_pred -------------eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccc
Confidence 124899999999999997653 236677889999999999999999999999999
Q ss_pred CCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCC
Q 001548 357 PSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGN 436 (1056)
Q Consensus 357 P~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 436 (1056)
|+||+++.++.+|++|||+++........
T Consensus 150 p~nili~~~~~~kl~d~g~~~~~~~~~~~--------------------------------------------------- 178 (280)
T cd05049 150 TRNCLVGYDLVVKIGDFGMSRDVYTTDYY--------------------------------------------------- 178 (280)
T ss_pred cceEEEcCCCeEEECCcccceecccCcce---------------------------------------------------
Confidence 99999999999999999988654310000
Q ss_pred cccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhH
Q 001548 437 KIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIY 516 (1056)
Q Consensus 437 ~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIw 516 (1056)
..-....+++.|+|||++.+..++.++|||
T Consensus 179 --------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 208 (280)
T cd05049 179 --------------------------------------------------RVGGHTMLPIRWMPPESIMYRKFTTESDVW 208 (280)
T ss_pred --------------------------------------------------ecCCCCcccceecChhhhccCCcchhhhHH
Confidence 000023456779999999999999999999
Q ss_pred HHHHHHHHHhC-CCCcH--HHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001548 517 SLGVLFFELFG-RFDSE--RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1056)
Q Consensus 517 SLGvlL~eLlt-~f~~~--~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~ 581 (1056)
||||++|||++ +..++ .........+.....++.....+..+.+|+.+||.+||.+||++.|+++
T Consensus 209 slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 209 SFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred HHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 99999999997 52221 1112223333344344434466788999999999999999999999986
No 186
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.95 E-value=8.6e-28 Score=273.57 Aligned_cols=178 Identities=19% Similarity=0.210 Sum_probs=141.5
Q ss_pred cccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhccccccc
Q 001548 305 RQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESAS 384 (1056)
Q Consensus 305 ~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~ 384 (1056)
.+|||++|++|.+++...+ .+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 78 lv~Ey~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~- 155 (323)
T cd05615 78 FVMEYVNGGDLMYHIQQVG-KFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG- 155 (323)
T ss_pred EEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCC-
Confidence 4899999999999997655 46777999999999999999999999999999999999999999999999886532100
Q ss_pred CCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCccccccc
Q 001548 385 LDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTN 464 (1056)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~ 464 (1056)
T Consensus 156 -------------------------------------------------------------------------------- 155 (323)
T cd05615 156 -------------------------------------------------------------------------------- 155 (323)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHh
Q 001548 465 AGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSD 541 (1056)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~ 541 (1056)
.......||+.|+|||++.+..++.++|||||||+||||++| |............
T Consensus 156 ----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i 213 (323)
T cd05615 156 ----------------------VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSI 213 (323)
T ss_pred ----------------------ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 000134689999999999999999999999999999999986 4333332222222
Q ss_pred hccCCCCCCCCCCChhHHHHHHhccccCCCCCCC-----HHHHhhhhhhhhh
Q 001548 542 LRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT-----TREILQSEVTNEF 588 (1056)
Q Consensus 542 ~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt-----~~eil~~~~~~~~ 588 (1056)
+.... ......++.+.+|+.+||+++|.+|++ ..++++||||...
T Consensus 214 ~~~~~--~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 214 MEHNV--SYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI 263 (323)
T ss_pred HhCCC--CCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence 22221 122345788899999999999999997 4799999999864
No 187
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.95 E-value=1.6e-27 Score=268.70 Aligned_cols=202 Identities=13% Similarity=0.090 Sum_probs=147.2
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC------------------C
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG------------------H 324 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~------------------~ 324 (1056)
...+....||||+.+......+... ..+|||++|++|.++|.... .
T Consensus 70 ~~~l~~l~h~niv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 133 (304)
T cd05096 70 VKILSRLKDPNIIRLLGVCVDEDPL----------------CMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLP 133 (304)
T ss_pred HHHHhhcCCCCeeEEEEEEecCCce----------------EEEEecCCCCcHHHHHHhccccccccccccccccccccc
Confidence 4567788999999876654322211 24899999999999996532 1
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccc
Q 001548 325 KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEM 404 (1056)
Q Consensus 325 ~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (1056)
.++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 134 ~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~-------------------- 193 (304)
T cd05096 134 AISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDY-------------------- 193 (304)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccCce--------------------
Confidence 345567889999999999999999999999999999999999999999999876431000
Q ss_pred ccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCcccccccc
Q 001548 405 FTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQ 484 (1056)
Q Consensus 405 ~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (1056)
T Consensus 194 -------------------------------------------------------------------------------- 193 (304)
T cd05096 194 -------------------------------------------------------------------------------- 193 (304)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCC-----CCcHHH---HHHHHHhhcc---CCCCCCCCC
Q 001548 485 QSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR-----FDSERA---LAAAMSDLRD---RILPPSFLS 553 (1056)
Q Consensus 485 ~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~-----f~~~~~---~~~~~~~~~~---~~lp~~~~~ 553 (1056)
........++..|+|||++.++.++.++|||||||++|||+++ |..... ........+. ...+.....
T Consensus 194 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (304)
T cd05096 194 -YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPP 272 (304)
T ss_pred -eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCC
Confidence 0000023456779999999988999999999999999999842 322111 1111111111 112222345
Q ss_pred CChhHHHHHHhccccCCCCCCCHHHHhh
Q 001548 554 ENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1056)
Q Consensus 554 ~~~~~~~li~~lL~~dP~~Rpt~~eil~ 581 (1056)
.++.+.+|+.+||..||.+|||+.+|.+
T Consensus 273 ~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 273 CPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred CCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 5778899999999999999999999954
No 188
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.95 E-value=1e-27 Score=273.92 Aligned_cols=207 Identities=14% Similarity=0.144 Sum_probs=155.3
Q ss_pred hhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Q 001548 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (1056)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ 343 (1056)
.++....||+|+.+......+... ..+|||++|++|.+++...+..+++..++.++.||+.||+
T Consensus 53 ~~l~~~~~~~i~~~~~~~~~~~~~----------------~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~ 116 (331)
T cd05597 53 DVLVNGDRRWITNLHYAFQDENNL----------------YLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAID 116 (331)
T ss_pred HHHHhCCCCCCCceEEEEecCCeE----------------EEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 345667899998765543322111 2489999999999999876667888899999999999999
Q ss_pred HhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccc
Q 001548 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (1056)
Q Consensus 344 ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 423 (1056)
|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 117 ~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--------------------------------------- 157 (331)
T cd05597 117 SVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT--------------------------------------- 157 (331)
T ss_pred HHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC---------------------------------------
Confidence 99999999999999999999999999999998865431000
Q ss_pred cccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCccc
Q 001548 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (1056)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 503 (1056)
......+||+.|+|||+
T Consensus 158 ---------------------------------------------------------------~~~~~~~gt~~y~aPE~ 174 (331)
T cd05597 158 ---------------------------------------------------------------VQSNVAVGTPDYISPEI 174 (331)
T ss_pred ---------------------------------------------------------------ccccceeccccccCHHH
Confidence 00013468999999999
Q ss_pred ccC-----CCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhc---cCCCCCCCCCCChhHHHHHHhccccCCCC
Q 001548 504 LSG-----GVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLR---DRILPPSFLSENPKEAGFCLWQLHPEPLS 572 (1056)
Q Consensus 504 l~~-----~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~---~~~lp~~~~~~~~~~~~li~~lL~~dP~~ 572 (1056)
+.+ ..++.++|||||||+||||++| |.............. ...+++.....++.+.+|+.+||..++.+
T Consensus 175 ~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r 254 (331)
T cd05597 175 LQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETR 254 (331)
T ss_pred HhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccc
Confidence 974 4578899999999999999986 433322222222222 22344555567888999999998764444
Q ss_pred --CCCHHHHhhhhhhhhh
Q 001548 573 --RPTTREILQSEVTNEF 588 (1056)
Q Consensus 573 --Rpt~~eil~~~~~~~~ 588 (1056)
|+++.++++||||...
T Consensus 255 ~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 255 LGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred cCCCCHHHHhcCCCCCCC
Confidence 7899999999999764
No 189
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.95 E-value=3.4e-27 Score=270.30 Aligned_cols=254 Identities=15% Similarity=0.126 Sum_probs=167.8
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCCch-hHHHHhhhhhhccC-CCCCCCcccceeeecCCCC
Q 001548 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD-AALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLD 288 (1056)
Q Consensus 213 ~~~~k~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 288 (1056)
.|.+.+.++ |+|+||++...+--.....+....+..+.....+ ...-......+... .||||+.+..........
T Consensus 8 ~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~- 86 (337)
T cd05054 8 RLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP- 86 (337)
T ss_pred HhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC-
Confidence 566666554 7899999964211000001111111111111111 11112223455555 789999866543211110
Q ss_pred CCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC---------------------------------------------
Q 001548 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG--------------------------------------------- 323 (1056)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~--------------------------------------------- 323 (1056)
-..+|+|+.|++|.++|....
T Consensus 87 --------------~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (337)
T cd05054 87 --------------LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKS 152 (337)
T ss_pred --------------EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcc
Confidence 113789999999999986432
Q ss_pred ---------------CCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCC
Q 001548 324 ---------------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIP 388 (1056)
Q Consensus 324 ---------------~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~ 388 (1056)
..++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.+......
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~--- 229 (337)
T cd05054 153 LSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY--- 229 (337)
T ss_pred hhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcch---
Confidence 14677789999999999999999999999999999999999999999999998765410000
Q ss_pred CCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCC
Q 001548 389 HSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFG 468 (1056)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~ 468 (1056)
T Consensus 230 -------------------------------------------------------------------------------- 229 (337)
T cd05054 230 -------------------------------------------------------------------------------- 229 (337)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhcc
Q 001548 469 NYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRD 544 (1056)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~ 544 (1056)
.......++..|+|||++.+..++.++|||||||+||||++ + |............+..
T Consensus 230 ------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~ 291 (337)
T cd05054 230 ------------------VRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKE 291 (337)
T ss_pred ------------------hhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhc
Confidence 00002345567999999999999999999999999999996 4 3322111222223333
Q ss_pred CCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001548 545 RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 545 ~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~ 582 (1056)
...+.......+++.+++.+||+.+|.+||++.||+++
T Consensus 292 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 292 GTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred cCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 33333334567889999999999999999999999985
No 190
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.95 E-value=1.2e-27 Score=261.52 Aligned_cols=203 Identities=18% Similarity=0.174 Sum_probs=157.7
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~QIl~g 341 (1056)
...++...|||++.+......+.. ...+++|++|++|.+++... +..++...+..++.||+.|
T Consensus 50 ~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~a 113 (256)
T cd08529 50 ARVLAKLDSSYIIRYYESFLDKGK----------------LNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLG 113 (256)
T ss_pred HHHHHhcCCCCeehheeeeccCCE----------------EEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 446777899999876554332211 12489999999999999764 5567888899999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|.|||+.||+|+||||+||+++.++.+|++|||+++......
T Consensus 114 l~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~-------------------------------------- 155 (256)
T cd08529 114 LAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT-------------------------------------- 155 (256)
T ss_pred HHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc--------------------------------------
Confidence 999999999999999999999999999999999886543100
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
.......|+++|+||
T Consensus 156 -----------------------------------------------------------------~~~~~~~~~~~y~aP 170 (256)
T cd08529 156 -----------------------------------------------------------------NFANTIVGTPYYLSP 170 (256)
T ss_pred -----------------------------------------------------------------chhhccccCccccCH
Confidence 000134578889999
Q ss_pred ccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001548 502 EELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1056)
Q Consensus 502 E~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~e 578 (1056)
|++.+..++.++|||||||++|||+++ |........ ...+.....++.....++.+.+++.+||+.+|++||++.+
T Consensus 171 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ 249 (256)
T cd08529 171 ELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGAL-ILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQ 249 (256)
T ss_pred HHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHHH
Confidence 999998899999999999999999986 333332222 2223333344444466788999999999999999999999
Q ss_pred Hhhhhhh
Q 001548 579 ILQSEVT 585 (1056)
Q Consensus 579 il~~~~~ 585 (1056)
+++|||+
T Consensus 250 ll~~~~~ 256 (256)
T cd08529 250 LLRNPSL 256 (256)
T ss_pred HhhCCCC
Confidence 9999985
No 191
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.95 E-value=2.3e-25 Score=246.71 Aligned_cols=299 Identities=17% Similarity=0.216 Sum_probs=238.1
Q ss_pred ccccccccccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCc
Q 001548 723 NDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKK 802 (1056)
Q Consensus 723 ~~~l~gh~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg~ 802 (1056)
....+.|...|.+++|. .+.+...+++.||.+-++|=.+++..+.+.. -.+|.+.|.+++|+||+..|+|++.|++
T Consensus 183 k~s~r~HskFV~~VRys--PDG~~Fat~gsDgki~iyDGktge~vg~l~~--~~aHkGsIfalsWsPDs~~~~T~SaDkt 258 (603)
T KOG0318|consen 183 KSSFREHSKFVNCVRYS--PDGSRFATAGSDGKIYIYDGKTGEKVGELED--SDAHKGSIFALSWSPDSTQFLTVSADKT 258 (603)
T ss_pred eecccccccceeeEEEC--CCCCeEEEecCCccEEEEcCCCccEEEEecC--CCCccccEEEEEECCCCceEEEecCCce
Confidence 45678899999999982 2233445889999999999999998888863 4589999999999999999999999999
Q ss_pred EEEEEcCCCC-------C-----------------------------CCcccccceEeecCCCCeEEEEEecCCCCEEEE
Q 001548 803 IKIFEFNALF-------N-----------------------------DSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLAS 846 (1056)
Q Consensus 803 I~Iwdl~t~~-------~-----------------------------~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaS 846 (1056)
+||||+.+.. . +..+...+.+..+|...|+++..+++ +.+|+|
T Consensus 259 ~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d-~~~i~S 337 (603)
T KOG0318|consen 259 IKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPD-GKTIYS 337 (603)
T ss_pred EEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCC-CCEEEe
Confidence 9999987520 0 00112234566789999999999999 799999
Q ss_pred EECCCcEEEEEcCCCceE-----------EEEecCC--------------------------------------------
Q 001548 847 ADYDGVVKLWDACTGQTV-----------SHYIEHE-------------------------------------------- 871 (1056)
Q Consensus 847 gs~Dg~V~lWD~~t~~~v-----------~~~~~H~-------------------------------------------- 871 (1056)
|++||.|.-||..+|..- ..+..++
T Consensus 338 gsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~ 417 (603)
T KOG0318|consen 338 GSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDG 417 (603)
T ss_pred eccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCC
Confidence 999999999998654211 1111000
Q ss_pred --------------------------CcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCce---eEEEeCCCCeEEEEEc
Q 001548 872 --------------------------KRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNS---LATIKNIANVCCVQFS 922 (1056)
Q Consensus 872 --------------------------~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~---~~~~~~~~~V~sv~fs 922 (1056)
-...+++++| ++..+|.|+.|+.|+||.+..+.. .+.+.|.+.|++|+|+
T Consensus 418 ~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~-~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vayS 496 (603)
T KOG0318|consen 418 GTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSP-DGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYS 496 (603)
T ss_pred CEEEEEecCcEEEEecCCcceeeccccccceEEEcC-CCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEEC
Confidence 0135777888 899999999999999999987542 3556789999999999
Q ss_pred cCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcC-CCEEEEEECCCeEEEEECCCCCCCCCCCCceeEE
Q 001548 923 AHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLD-SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLT 1001 (1056)
Q Consensus 923 p~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs~-~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~ 1001 (1056)
|++. +||+|...+.|.+||..+.........-|+..|.+|+|+| +.+++|||-|..|.||++.++. +.+..
T Consensus 497 pd~~-yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~-------~~i~i 568 (603)
T KOG0318|consen 497 PDGA-YLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPA-------KHIII 568 (603)
T ss_pred CCCc-EEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChh-------hheEe
Confidence 9997 9999999999999999987764444555999999999995 5569999999999999998532 33556
Q ss_pred ecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCC
Q 001548 1002 FSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTS 1047 (1056)
Q Consensus 1002 ~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~ 1047 (1056)
...|...|..+.. .+...|++.|.|..|++|++.
T Consensus 569 knAH~~gVn~v~w------------lde~tvvSsG~Da~iK~W~v~ 602 (603)
T KOG0318|consen 569 KNAHLGGVNSVAW------------LDESTVVSSGQDANIKVWNVT 602 (603)
T ss_pred ccccccCceeEEE------------ecCceEEeccCcceeEEeccc
Confidence 6778888877773 367788999999999999974
No 192
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.95 E-value=8.5e-28 Score=267.60 Aligned_cols=203 Identities=17% Similarity=0.189 Sum_probs=148.8
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....|||++.+.+....... ...+++|++| +|.+++...+..+++..++.++.||+.||
T Consensus 50 i~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al 112 (284)
T cd07839 50 ICLLKELKHKNIVRLYDVLHSDKK----------------LTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGL 112 (284)
T ss_pred HHHHHhcCCCCeeeHHHHhccCCc----------------eEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 456777789999976655321111 1237778864 89888876656688889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 113 ~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~--------------------------------------- 153 (284)
T cd07839 113 AFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV--------------------------------------- 153 (284)
T ss_pred HHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC---------------------------------------
Confidence 99999999999999999999999999999999886543100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......++++|+|||
T Consensus 154 ----------------------------------------------------------------~~~~~~~~~~~y~aPE 169 (284)
T cd07839 154 ----------------------------------------------------------------RCYSAEVVTLWYRPPD 169 (284)
T ss_pred ----------------------------------------------------------------CCcCCCccccCCcChH
Confidence 0011345678899999
Q ss_pred cccCC-CCCccchhHHHHHHHHHHhCC----CCcHHHHHH---HHHhhc--------------c-CCCC---------CC
Q 001548 503 ELSGG-VCTTSSNIYSLGVLFFELFGR----FDSERALAA---AMSDLR--------------D-RILP---------PS 550 (1056)
Q Consensus 503 ~l~~~-~~t~~sDIwSLGvlL~eLlt~----f~~~~~~~~---~~~~~~--------------~-~~lp---------~~ 550 (1056)
.+.+. .++.++|||||||++|||+++ |.+...... .+..+. . ...+ +.
T Consensus 170 ~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (284)
T cd07839 170 VLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNV 249 (284)
T ss_pred HHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhh
Confidence 98774 479999999999999999975 222211111 111100 0 0000 11
Q ss_pred CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 551 FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 551 ~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
....++.+.+|+.+||+.||.+|||+.+++.||||
T Consensus 250 ~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 250 VPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred cccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 22456788999999999999999999999999997
No 193
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.95 E-value=2.2e-27 Score=263.81 Aligned_cols=250 Identities=16% Similarity=0.157 Sum_probs=175.9
Q ss_pred hHHHhhhcc--ccceeeeCCCCC-ccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCC
Q 001548 213 EFFVKTTLK--GKGIVCRGPPLN-AFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1056)
Q Consensus 213 ~~~~k~~~~--g~Gvv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1056)
.|-|.+.++ +.|.||++.... +..+ ..+.. ..........-.....++....|||++.+.+....+...
T Consensus 6 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~-----~iK~~-~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~-- 77 (280)
T cd06611 6 IWEIIGELGDGAFGKVYKAQHKETGLFA-----AAKII-QIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKL-- 77 (280)
T ss_pred HHHHHHHhcCCCCceEEEEEEcCCCcEE-----EEEEE-eeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeE--
Confidence 466665554 779999997631 1111 11110 101111111122234577788899999877764422211
Q ss_pred CcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEE
Q 001548 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1056)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vk 369 (1056)
..+|+|++|++|.+++...+..+++..++.++.||+.||.|||++||+|+||||+||+++.++.++
T Consensus 78 --------------~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~ 143 (280)
T cd06611 78 --------------WILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVK 143 (280)
T ss_pred --------------EEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEE
Confidence 248999999999999987766788889999999999999999999999999999999999999999
Q ss_pred EeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCccccccccccccc
Q 001548 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1056)
Q Consensus 370 l~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~ 449 (1056)
|+|||++.......
T Consensus 144 l~d~g~~~~~~~~~------------------------------------------------------------------ 157 (280)
T cd06611 144 LADFGVSAKNKSTL------------------------------------------------------------------ 157 (280)
T ss_pred EccCccchhhcccc------------------------------------------------------------------
Confidence 99999875532100
Q ss_pred CCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCccccc-----CCCCCccchhHHHHHHHHH
Q 001548 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS-----GGVCTTSSNIYSLGVLFFE 524 (1056)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-----~~~~t~~sDIwSLGvlL~e 524 (1056)
.......||+.|+|||++. +.+++.++|||||||++||
T Consensus 158 -------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~ 200 (280)
T cd06611 158 -------------------------------------QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIE 200 (280)
T ss_pred -------------------------------------cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHH
Confidence 0001346788899999985 3457889999999999999
Q ss_pred HhCCCCcH---HHHHHHHHhhccCCCC--CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001548 525 LFGRFDSE---RALAAAMSDLRDRILP--PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1056)
Q Consensus 525 Llt~f~~~---~~~~~~~~~~~~~~lp--~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~ 588 (1056)
|+++..++ ........ +.....+ ......+..+.+|+.+||+.+|.+||++.++++||||...
T Consensus 201 l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 201 LAQMEPPHHELNPMRVLLK-ILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred HHhCCCCcccCCHHHHHHH-HhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 99873332 22222222 2222111 1223456788999999999999999999999999999875
No 194
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.95 E-value=1.8e-26 Score=247.03 Aligned_cols=261 Identities=21% Similarity=0.282 Sum_probs=214.7
Q ss_pred ccccccccccccceeeeccc-ccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeC
Q 001548 721 ADNDLLRDRENLFLAQQDQE-IQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGV 799 (1056)
Q Consensus 721 ~~~~~l~gh~~~v~~~~~~~-~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~ 799 (1056)
....++.||.+.+.++.+-. .......++++.|.++++|..+..+..-.... .-.||...|-+++..++|..|++|+.
T Consensus 135 k~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~-~~~GHk~~V~sVsv~~sgtr~~SgS~ 213 (423)
T KOG0313|consen 135 KSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALK-VCRGHKRSVDSVSVDSSGTRFCSGSW 213 (423)
T ss_pred ceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHh-HhcccccceeEEEecCCCCeEEeecc
Confidence 45678899999998766521 11222367999999999999876554332211 12399999999999999999999999
Q ss_pred CCcEEEEEcCCCCCC-----------------Ccccccc-eEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCC
Q 001548 800 SKKIKIFEFNALFND-----------------SVDVYYP-AVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTG 861 (1056)
Q Consensus 800 Dg~I~Iwdl~t~~~~-----------------~~~~~~~-~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~ 861 (1056)
|.+|+||+..+...+ ......| ....+|..+|.+|.|.+ ...++|+|.|.+|+.||+.++
T Consensus 214 D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d--~~v~yS~SwDHTIk~WDletg 291 (423)
T KOG0313|consen 214 DTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD--ATVIYSVSWDHTIKVWDLETG 291 (423)
T ss_pred cceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC--CCceEeecccceEEEEEeecc
Confidence 999999994431110 0111222 34568999999999998 678999999999999999999
Q ss_pred ceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCce---eEEE-eCCCCeEEEEEccCCCcEEEEEeCCCe
Q 001548 862 QTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNS---LATI-KNIANVCCVQFSAHSSHLLAFGSADYR 937 (1056)
Q Consensus 862 ~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~---~~~~-~~~~~V~sv~fsp~~~~~lasGs~Dg~ 937 (1056)
+++.++. -....+|++.+| ...+||+||.|..+++||-|++.. .+++ .|.+-|.++.|+|...+.|++|+.|++
T Consensus 292 ~~~~~~~-~~ksl~~i~~~~-~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t 369 (423)
T KOG0313|consen 292 GLKSTLT-TNKSLNCISYSP-LSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNT 369 (423)
T ss_pred cceeeee-cCcceeEeeccc-ccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCe
Confidence 9998887 457899999999 889999999999999999998752 2233 377889999999999999999999999
Q ss_pred EEEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEECC
Q 001548 938 TYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLK 986 (1056)
Q Consensus 938 V~lwDlr~~~~~~~~l~gH~~~V~~l~fs~~~~L~SgS~Dg~IkiWdl~ 986 (1056)
+++||+|+.+.|++.+.+|...|.++.|..+..|+||+.|++|+|+.-.
T Consensus 370 ~klWDvRS~k~plydI~~h~DKvl~vdW~~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 370 VKLWDVRSTKAPLYDIAGHNDKVLSVDWNEGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred EEEEEeccCCCcceeeccCCceEEEEeccCCceEEeccCcceEEEeccc
Confidence 9999999999889999999999999999999999999999999998754
No 195
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.95 E-value=3e-27 Score=263.14 Aligned_cols=199 Identities=13% Similarity=0.003 Sum_probs=149.5
Q ss_pred hhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Q 001548 265 MVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDY 344 (1056)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~y 344 (1056)
.+....||||+.+....... . -...++++.+++|.+++......+++..++.++.||+.||.|
T Consensus 62 ~l~~l~h~~iv~~~~~~~~~---------~--------~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~ 124 (279)
T cd05111 62 AMGSLDHAYIVRLLGICPGA---------S--------LQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYY 124 (279)
T ss_pred HHhcCCCCCcceEEEEECCC---------c--------cEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHH
Confidence 45677899999765542100 0 113788999999999998776678888999999999999999
Q ss_pred hhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccccc
Q 001548 345 HHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFS 424 (1056)
Q Consensus 345 lHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 424 (1056)
||++||+||||||+|||++.++.+|++|||+++.......
T Consensus 125 lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------- 164 (279)
T cd05111 125 LEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDK---------------------------------------- 164 (279)
T ss_pred HHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCc----------------------------------------
Confidence 9999999999999999999999999999999876431000
Q ss_pred ccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccc
Q 001548 425 RWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEEL 504 (1056)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l 504 (1056)
....+...++..|+|||.+
T Consensus 165 -------------------------------------------------------------~~~~~~~~~~~~y~~pE~~ 183 (279)
T cd05111 165 -------------------------------------------------------------KYFYSEHKTPIKWMALESI 183 (279)
T ss_pred -------------------------------------------------------------ccccCCCCCcccccCHHHh
Confidence 0000123456679999999
Q ss_pred cCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHh
Q 001548 505 SGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREIL 580 (1056)
Q Consensus 505 ~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil 580 (1056)
.+..++.++|||||||++|||++ + |.+... ......+.....++........+..++.+||..||++|||+.|++
T Consensus 184 ~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~ 262 (279)
T cd05111 184 LFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP-HEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELA 262 (279)
T ss_pred ccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHH
Confidence 98899999999999999999997 5 322211 112222333333333334566788999999999999999999997
Q ss_pred hh
Q 001548 581 QS 582 (1056)
Q Consensus 581 ~~ 582 (1056)
+.
T Consensus 263 ~~ 264 (279)
T cd05111 263 NE 264 (279)
T ss_pred HH
Confidence 73
No 196
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.95 E-value=1.8e-27 Score=262.82 Aligned_cols=200 Identities=13% Similarity=0.109 Sum_probs=150.7
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+...+|||++.+......+... ..+|||++|++|.+++......+++..++.++.||+.||
T Consensus 57 ~~~l~~l~h~~iv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al 120 (266)
T cd05064 57 ALTLGQFDHSNIVRLEGVITRGNTM----------------MIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGM 120 (266)
T ss_pred HHHHhcCCCCCcCeEEEEEecCCCc----------------EEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 4566677899999876553322111 148999999999999987655678889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
+|||++||+||||||+|||++.++.+|++|||++........
T Consensus 121 ~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~-------------------------------------- 162 (266)
T cd05064 121 KYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAI-------------------------------------- 162 (266)
T ss_pred HHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccch--------------------------------------
Confidence 999999999999999999999999999999997644220000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......++..|+|||
T Consensus 163 ----------------------------------------------------------------~~~~~~~~~~~y~aPE 178 (266)
T cd05064 163 ----------------------------------------------------------------YTTMSGKSPVLWAAPE 178 (266)
T ss_pred ----------------------------------------------------------------hcccCCCCceeecCHH
Confidence 0000223456799999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~e 578 (1056)
.+.+..++.++|||||||++|||++ | |...... .....+.....++.....+..+.+++..||+++|.+||++.+
T Consensus 179 ~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~ 257 (266)
T cd05064 179 AIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ-DVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQ 257 (266)
T ss_pred HHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-HHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHH
Confidence 9999999999999999999999774 5 3222221 222233333334445566788999999999999999999999
Q ss_pred Hhh
Q 001548 579 ILQ 581 (1056)
Q Consensus 579 il~ 581 (1056)
|++
T Consensus 258 i~~ 260 (266)
T cd05064 258 IHS 260 (266)
T ss_pred HHH
Confidence 976
No 197
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=5.5e-28 Score=247.19 Aligned_cols=231 Identities=13% Similarity=0.135 Sum_probs=171.9
Q ss_pred cccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCH
Q 001548 249 TTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKR 328 (1056)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~ 328 (1056)
...++.+..+++. ++--++|+|++.++........+-......++ .++.+|+ -+|..+|......++.
T Consensus 56 KeGfpitalreik---iL~~lkHenv~nliEic~tk~Tp~~r~r~t~y--------lVf~~ce-hDLaGlLsn~~vr~sl 123 (376)
T KOG0669|consen 56 KEGFPITALREIK---ILQLLKHENVVNLIEICRTKATPTNRDRATFY--------LVFDFCE-HDLAGLLSNRKVRFSL 123 (376)
T ss_pred ccCCcHHHHHHHH---HHHHhcchhHHHHHHHHhhccCCcccccceee--------eeHHHhh-hhHHHHhcCccccccH
Confidence 5678888777665 56666788887776665544444321111121 2445555 4888888777677888
Q ss_pred HHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccc
Q 001548 329 IECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTG 408 (1056)
Q Consensus 329 ~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (1056)
.+++.++++++.||.|+|++.|+|||+||+|+||+.+|.+||+|||+++.+..+...
T Consensus 124 s~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~----------------------- 180 (376)
T KOG0669|consen 124 SEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNV----------------------- 180 (376)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccceeccccc-----------------------
Confidence 899999999999999999999999999999999999999999999999887621100
Q ss_pred ccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCcccccccccccc
Q 001548 409 IASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTS 488 (1056)
Q Consensus 409 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (1056)
....
T Consensus 181 ----------------------------------------------------------------------------~kpr 184 (376)
T KOG0669|consen 181 ----------------------------------------------------------------------------VKPR 184 (376)
T ss_pred ----------------------------------------------------------------------------CCCC
Confidence 0112
Q ss_pred ccccccCCCccCcccccC-CCCCccchhHHHHHHHHHHhCC---CCcHHH--HHHHHHhhccCCCCCCCC----------
Q 001548 489 VSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERA--LAAAMSDLRDRILPPSFL---------- 552 (1056)
Q Consensus 489 ~~~~~gt~~Y~APE~l~~-~~~t~~sDIwSLGvlL~eLlt~---f~~~~~--~~~~~~~~~~~~lp~~~~---------- 552 (1056)
+|..+-|.||++||.+.| ..|+++.|||..||++.||+++ +.+..+ ....++.+.+.+-+..|+
T Consensus 185 ytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~s 264 (376)
T KOG0669|consen 185 YTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQS 264 (376)
T ss_pred cccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHh
Confidence 457889999999999999 5699999999999999999986 444433 333455554432221111
Q ss_pred ---------------------CCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhh
Q 001548 553 ---------------------SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1056)
Q Consensus 553 ---------------------~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~ 590 (1056)
...+..++|+..||..||.+|+.+.++|.|+||...+-
T Consensus 265 ie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~ 323 (376)
T KOG0669|consen 265 IELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPM 323 (376)
T ss_pred ccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCc
Confidence 12346789999999999999999999999999987543
No 198
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.95 E-value=4.3e-25 Score=240.31 Aligned_cols=250 Identities=26% Similarity=0.372 Sum_probs=215.3
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001548 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1056)
Q Consensus 774 ~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V 853 (1056)
.+.+|.+.|.++.|+|++++|++++.|+.|++|++.+. ........|...+.++.|+++ ++.|++++.||.|
T Consensus 4 ~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~-------~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~~~~i 75 (289)
T cd00200 4 TLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETG-------ELLRTLKGHTGPVRDVAASAD-GTYLASGSSDKTI 75 (289)
T ss_pred HhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCC-------CcEEEEecCCcceeEEEECCC-CCEEEEEcCCCeE
Confidence 35589999999999999999999999999999999742 123344568888999999998 6899999999999
Q ss_pred EEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEEE
Q 001548 854 KLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFG 932 (1056)
Q Consensus 854 ~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~lasG 932 (1056)
++||+.+++.+..+..|...+.++.|++ ++.++++++.|+.|.+||+++++....+. +...|.+++|+|++. +++++
T Consensus 76 ~i~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~ 153 (289)
T cd00200 76 RLWDLETGECVRTLTGHTSYVSSVAFSP-DGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGT-FVASS 153 (289)
T ss_pred EEEEcCcccceEEEeccCCcEEEEEEcC-CCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCC-EEEEE
Confidence 9999999888999999999999999999 68888888889999999999888888776 667899999999965 88888
Q ss_pred eCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCC-CEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEE
Q 001548 933 SADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDS-GTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVG 1011 (1056)
Q Consensus 933 s~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs~~-~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ 1011 (1056)
+.|+.|++||+++.+. ...+..|...|.++.|++. ..+++++.|+.|++||++ .+..+..+.+|.+.+.+
T Consensus 154 ~~~~~i~i~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~--------~~~~~~~~~~~~~~i~~ 224 (289)
T cd00200 154 SQDGTIKLWDLRTGKC-VATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLS--------TGKCLGTLRGHENGVNS 224 (289)
T ss_pred cCCCcEEEEEcccccc-ceeEecCccccceEEECCCcCEEEEecCCCcEEEEECC--------CCceecchhhcCCceEE
Confidence 8899999999987665 6677889999999999954 489999999999999998 35667778888888877
Q ss_pred EEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCCeEEE
Q 001548 1012 ICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWGCLLL 1053 (1056)
Q Consensus 1012 ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~~~~~ 1053 (1056)
+. +++++.++++++.|+++.+|++..+..+.
T Consensus 225 ~~-----------~~~~~~~~~~~~~~~~i~i~~~~~~~~~~ 255 (289)
T cd00200 225 VA-----------FSPDGYLLASGSEDGTIRVWDLRTGECVQ 255 (289)
T ss_pred EE-----------EcCCCcEEEEEcCCCcEEEEEcCCceeEE
Confidence 77 77888888888889999999998765543
No 199
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.95 E-value=2.1e-27 Score=264.52 Aligned_cols=203 Identities=20% Similarity=0.192 Sum_probs=154.0
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC----------------CCC
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG----------------HKG 326 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~----------------~~~ 326 (1056)
...++...|||++.+......... ...+|||+.+++|.+++.... ..+
T Consensus 58 ~~~l~~l~h~niv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 121 (283)
T cd05090 58 ASLMAELHHPNIVCLLGVVTQEQP----------------VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSL 121 (283)
T ss_pred HHHHhhCCCCCeeeEEEEEecCCc----------------eEEEEEcCCCCcHHHHHHhcCCCCcccccccccccccccc
Confidence 457888899999986654332111 124899999999999995432 236
Q ss_pred CHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccc
Q 001548 327 KRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFT 406 (1056)
Q Consensus 327 ~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (1056)
++..++.++.||+.||.|||++||+||||||+|||++.++.+|++|||+++........
T Consensus 122 ~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~--------------------- 180 (283)
T cd05090 122 DHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYY--------------------- 180 (283)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCCcce---------------------
Confidence 67788999999999999999999999999999999999999999999998765410000
Q ss_pred ccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCcccccccccc
Q 001548 407 TGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQS 486 (1056)
Q Consensus 407 ~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (1056)
T Consensus 181 -------------------------------------------------------------------------------- 180 (283)
T cd05090 181 -------------------------------------------------------------------------------- 180 (283)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHH
Q 001548 487 TSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFC 562 (1056)
Q Consensus 487 ~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li 562 (1056)
.......++..|+|||.+.+..++.++|||||||+||||++ + |.+... ...+..+.....++.....++.+.+++
T Consensus 181 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li 259 (283)
T cd05090 181 RVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN-QEVIEMVRKRQLLPCSEDCPPRMYSLM 259 (283)
T ss_pred ecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHH
Confidence 00002335667999999998889999999999999999997 4 333222 233444444444555556788899999
Q ss_pred HhccccCCCCCCCHHHHhhhh
Q 001548 563 LWQLHPEPLSRPTTREILQSE 583 (1056)
Q Consensus 563 ~~lL~~dP~~Rpt~~eil~~~ 583 (1056)
.+||++||.+||++.+|+++.
T Consensus 260 ~~cl~~~p~~Rp~~~~i~~~l 280 (283)
T cd05090 260 TECWQEGPSRRPRFKDIHTRL 280 (283)
T ss_pred HHHcccCcccCcCHHHHHHHh
Confidence 999999999999999998753
No 200
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.95 E-value=3.1e-27 Score=263.08 Aligned_cols=254 Identities=19% Similarity=0.166 Sum_probs=170.9
Q ss_pred chhHHHhhhcc--ccceeeeCCCCCcccccc-ccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCC
Q 001548 211 FSEFFVKTTLK--GKGIVCRGPPLNAFKERR-GMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSL 287 (1056)
Q Consensus 211 ~~~~~~k~~~~--g~Gvv~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1056)
++.|.+.+.++ |+|+||+|...+...... .....+.............-.....++....||||+.+..........
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~ 83 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL 83 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence 34566666554 789999997633211100 011111111111011111112234466777899999876653322211
Q ss_pred CCCcCCCCCcccccCCCcccccCCCCCHHHHHHhc---------------CCCCCHHHHHHHHHHHHHHHHHhhhcCccc
Q 001548 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR---------------GHKGKRIECLYIFRQIVALVDYHHTQGVTF 352 (1056)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~---------------~~~~~~~~~~~i~~QIl~gL~ylHs~gIvH 352 (1056)
...++++.+++|.+++... ...++...++.++.||+.||.|||++||+|
T Consensus 84 ----------------~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H 147 (283)
T cd05091 84 ----------------SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVH 147 (283)
T ss_pred ----------------EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccc
Confidence 1378899999999998532 123667788999999999999999999999
Q ss_pred ccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCC
Q 001548 353 LDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPS 432 (1056)
Q Consensus 353 rDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~ 432 (1056)
|||||+||++..++.+|++|||+++.......
T Consensus 148 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------ 179 (283)
T cd05091 148 KDLATRNVLVFDKLNVKISDLGLFREVYAADY------------------------------------------------ 179 (283)
T ss_pred cccchhheEecCCCceEecccccccccccchh------------------------------------------------
Confidence 99999999999999999999999876541000
Q ss_pred CCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCcc
Q 001548 433 KYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTS 512 (1056)
Q Consensus 433 ~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~ 512 (1056)
........+++.|+|||.+.+..++.+
T Consensus 180 -----------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~ 206 (283)
T cd05091 180 -----------------------------------------------------YKLMGNSLLPIRWMSPEAIMYGKFSID 206 (283)
T ss_pred -----------------------------------------------------eeeccCccCCccccCHHHHhcCCCCcc
Confidence 000002345678999999998889999
Q ss_pred chhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001548 513 SNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 513 sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~ 582 (1056)
+|||||||++|||++ + |.+... ......+.....++.....+..+.+|+..||+++|.+||++.+|++.
T Consensus 207 ~Dv~slG~~l~el~~~g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 207 SDIWSYGVVLWEVFSYGLQPYCGYSN-QDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred hhHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 999999999999997 4 333222 22333344444444445667778999999999999999999999874
No 201
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.95 E-value=2.3e-27 Score=262.86 Aligned_cols=205 Identities=15% Similarity=0.172 Sum_probs=157.1
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...++...|||++........+.. -..+++++.|++|.+++... .++...++.++.||+.||
T Consensus 50 ~~~l~~l~h~~i~~~~~~~~~~~~----------------~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l 111 (274)
T cd06609 50 IQFLSQCRSPYITKYYGSFLKGSK----------------LWIIMEYCGGGSCLDLLKPG--KLDETYIAFILREVLLGL 111 (274)
T ss_pred HHHHHHcCCCCeeeeeEEEEECCe----------------EEEEEEeeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHH
Confidence 456777789999876554332211 12478999999999999765 677889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+|+||+|+||+++.++.++++|||+++......
T Consensus 112 ~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--------------------------------------- 152 (274)
T cd06609 112 EYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM--------------------------------------- 152 (274)
T ss_pred HHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccc---------------------------------------
Confidence 99999999999999999999999999999999987754100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......+++.|+|||
T Consensus 153 ----------------------------------------------------------------~~~~~~~~~~~y~~PE 168 (274)
T cd06609 153 ----------------------------------------------------------------SKRNTFVGTPFWMAPE 168 (274)
T ss_pred ----------------------------------------------------------------cccccccCCccccChh
Confidence 0001345778899999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCCCCcH---HHHHHHHHhhccCCCCCCCCC-CChhHHHHHHhccccCCCCCCCHHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGRFDSE---RALAAAMSDLRDRILPPSFLS-ENPKEAGFCLWQLHPEPLSRPTTRE 578 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~f~~~---~~~~~~~~~~~~~~lp~~~~~-~~~~~~~li~~lL~~dP~~Rpt~~e 578 (1056)
.+.+..++.++|||||||++|+|++|..++ ..... ...+.....+..... .++.+.+++.+||..+|.+|||+++
T Consensus 169 ~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~ 247 (274)
T cd06609 169 VIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV-LFLIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKE 247 (274)
T ss_pred hhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH-HHHhhhcCCCCCcccccCHHHHHHHHHHhhCChhhCcCHHH
Confidence 999988999999999999999999973332 22221 122222222221222 5778999999999999999999999
Q ss_pred Hhhhhhhhhhh
Q 001548 579 ILQSEVTNEFQ 589 (1056)
Q Consensus 579 il~~~~~~~~~ 589 (1056)
+++||||....
T Consensus 248 il~~~~~~~~~ 258 (274)
T cd06609 248 LLKHKFIKKAK 258 (274)
T ss_pred HhhChhhcCCC
Confidence 99999997753
No 202
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.95 E-value=2.2e-27 Score=259.94 Aligned_cols=204 Identities=20% Similarity=0.230 Sum_probs=156.4
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~QIl~g 341 (1056)
...++...|||++.+......+.. .. ...++++.|++|.++++.. +..+++.+++.++.||+.|
T Consensus 50 ~~~l~~l~~~~i~~~~~~~~~~~~----------~~-----~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~ 114 (257)
T cd08223 50 AQLLSQLKHPNIVAYRESWEGEDG----------LL-----YIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMA 114 (257)
T ss_pred HHHHHhCCCCCeeeeeeeecCCCC----------EE-----EEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 456777789998875433110000 00 1389999999999999763 4457888999999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|.|||++||+|+||||+||+++.++.++++|||+++......
T Consensus 115 l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~-------------------------------------- 156 (257)
T cd08223 115 LQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC-------------------------------------- 156 (257)
T ss_pred HHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccC--------------------------------------
Confidence 999999999999999999999999999999999886543100
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
.......+++.|+||
T Consensus 157 -----------------------------------------------------------------~~~~~~~~~~~y~aP 171 (257)
T cd08223 157 -----------------------------------------------------------------DMASTLIGTPYYMSP 171 (257)
T ss_pred -----------------------------------------------------------------CccccccCCcCccCh
Confidence 000134578889999
Q ss_pred ccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001548 502 EELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1056)
Q Consensus 502 E~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~e 578 (1056)
|++.+..++.++|||||||++|+|+++ |....... ....+....+++.....++.+.+|+.+||.+||.+||++.+
T Consensus 172 E~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 250 (257)
T cd08223 172 ELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNS-LVYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKS 250 (257)
T ss_pred hHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHH
Confidence 999999899999999999999999986 43332222 22223333344444567788999999999999999999999
Q ss_pred Hhhhhhh
Q 001548 579 ILQSEVT 585 (1056)
Q Consensus 579 il~~~~~ 585 (1056)
+++||||
T Consensus 251 ~l~~~~~ 257 (257)
T cd08223 251 ILRQPYI 257 (257)
T ss_pred HhcCCCC
Confidence 9999997
No 203
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.95 E-value=2.8e-27 Score=260.90 Aligned_cols=194 Identities=13% Similarity=0.115 Sum_probs=144.0
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+......+... ..+|+|+++++|..++......+++..++.++.||+.||
T Consensus 55 ~~~l~~l~hp~iv~~~~~~~~~~~~----------------~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l 118 (262)
T cd05077 55 ASMMRQVSHKHIVLLYGVCVRDVEN----------------IMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASAL 118 (262)
T ss_pred HHHHHhCCCCCEeeEEEEEecCCCC----------------EEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 4567788999999876654322111 148999999999999977666688889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCc-------EEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQ-------VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~-------vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 415 (1056)
+|||++||+||||||+|||++.++. +|++|||++.....
T Consensus 119 ~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~---------------------------------- 164 (262)
T cd05077 119 SYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLS---------------------------------- 164 (262)
T ss_pred HHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccC----------------------------------
Confidence 9999999999999999999987664 88999987654320
Q ss_pred cccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccC
Q 001548 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (1056)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 495 (1056)
.....++
T Consensus 165 -------------------------------------------------------------------------~~~~~~~ 171 (262)
T cd05077 165 -------------------------------------------------------------------------RQECVER 171 (262)
T ss_pred -------------------------------------------------------------------------ccccccc
Confidence 0023467
Q ss_pred CCccCccccc-CCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCC
Q 001548 496 KWYASPEELS-GGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEP 570 (1056)
Q Consensus 496 ~~Y~APE~l~-~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP 570 (1056)
..|+|||.+. +..++.++|||||||+||||++ + |..... ... ........ .......+.+.+|+.+||+.||
T Consensus 172 ~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-~~~-~~~~~~~~-~~~~~~~~~~~~li~~cl~~dp 248 (262)
T cd05077 172 IPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL-AEK-ERFYEGQC-MLVTPSCKELADLMTHCMNYDP 248 (262)
T ss_pred ccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch-hHH-HHHHhcCc-cCCCCChHHHHHHHHHHcCCCh
Confidence 7799999987 4668999999999999999983 3 222111 111 11111111 1122335678899999999999
Q ss_pred CCCCCHHHHhhh
Q 001548 571 LSRPTTREILQS 582 (1056)
Q Consensus 571 ~~Rpt~~eil~~ 582 (1056)
.+||++.+|+++
T Consensus 249 ~~Rp~~~~il~~ 260 (262)
T cd05077 249 NQRPFFRAIMRD 260 (262)
T ss_pred hhCcCHHHHHHh
Confidence 999999999875
No 204
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.95 E-value=9e-26 Score=267.78 Aligned_cols=269 Identities=20% Similarity=0.259 Sum_probs=233.7
Q ss_pred CCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceE
Q 001548 744 PTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAV 823 (1056)
Q Consensus 744 ~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~ 823 (1056)
....++++.|+++++|+......... .+.+|.+.|.+++|..-+.++++|+.|++++|||..+ ..+...
T Consensus 218 ~~~~~~~s~~~tl~~~~~~~~~~i~~----~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~s-------g~C~~~ 286 (537)
T KOG0274|consen 218 DGFFKSGSDDSTLHLWDLNNGYLILT----RLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCST-------GECTHS 286 (537)
T ss_pred cCeEEecCCCceeEEeecccceEEEe----eccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCC-------CcEEEE
Confidence 45567889999999999765544322 3669999999999998889999999999999999875 455667
Q ss_pred eecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 001548 824 EMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINE 903 (1056)
Q Consensus 824 ~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~ 903 (1056)
..+|.+.|.|+...+ ..+++|+.|.+|++|++.++.++..+.+|...|++|..+ +.++++|+.|++|++||+++
T Consensus 287 l~gh~stv~~~~~~~---~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~---~~~lvsgs~d~~v~VW~~~~ 360 (537)
T KOG0274|consen 287 LQGHTSSVRCLTIDP---FLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD---EPLLVSGSYDGTVKVWDPRT 360 (537)
T ss_pred ecCCCceEEEEEccC---ceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec---CCEEEEEecCceEEEEEhhh
Confidence 779999999998875 488999999999999999999999999999999999996 67999999999999999999
Q ss_pred CceeEEEe-CCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEE
Q 001548 904 KNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKL 982 (1056)
Q Consensus 904 ~~~~~~~~-~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs~~~~L~SgS~Dg~Iki 982 (1056)
++++.++. |...|.++.+.+. ..+++|+.|++|++||+++....+.++.+|..-|+.+.+ .++.|++++.|++|++
T Consensus 361 ~~cl~sl~gH~~~V~sl~~~~~--~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~-~~~~Lvs~~aD~~Ik~ 437 (537)
T KOG0274|consen 361 GKCLKSLSGHTGRVYSLIVDSE--NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLL-RDNFLVSSSADGTIKL 437 (537)
T ss_pred ceeeeeecCCcceEEEEEecCc--ceEEeeeeccceEeecCCchhhhhhhhcCCccccccccc-ccceeEeccccccEEE
Confidence 99999997 6788999988876 389999999999999999984458999999999988777 5789999999999999
Q ss_pred EECCCCCCCCCCCCceeEEecC-CCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCCeEEE
Q 001548 983 WDLKRTSHTGPSTNACSLTFSG-HTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWGCLLL 1053 (1056)
Q Consensus 983 Wdl~~~~~~~~~~~~~~~~~~g-H~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~~~~~ 1053 (1056)
||.. .+.|+.++.+ |...|..++.. ...+++++.|+++.+||+..+..+-
T Consensus 438 WD~~--------~~~~~~~~~~~~~~~v~~l~~~-------------~~~il~s~~~~~~~l~dl~~~~~~~ 488 (537)
T KOG0274|consen 438 WDAE--------EGECLRTLEGRHVGGVSALALG-------------KEEILCSSDDGSVKLWDLRSGTLIR 488 (537)
T ss_pred eecc--------cCceeeeeccCCcccEEEeecC-------------cceEEEEecCCeeEEEecccCchhh
Confidence 9998 6789999999 66777666621 4667899999999999999887654
No 205
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.95 E-value=3.4e-27 Score=260.63 Aligned_cols=244 Identities=17% Similarity=0.111 Sum_probs=166.2
Q ss_pred hhhccccceeeeCCCCC-ccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCC
Q 001548 217 KTTLKGKGIVCRGPPLN-AFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGV 295 (1056)
Q Consensus 217 k~~~~g~Gvv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1056)
+...+|+|+||+|...+ +..+ ..+. .......+...-.....++....|+||+.+......+...
T Consensus 15 ~lg~g~~g~v~~~~~~~~~~~v-----~~k~-~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~-------- 80 (268)
T cd06624 15 VLGKGTYGIVYAARDLSTQVRI-----AIKE-IPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFF-------- 80 (268)
T ss_pred EEecCCceEEEEeEecCCCcEE-----EEEE-ecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEE--------
Confidence 34456889999997521 1111 1111 1111111111111224566777899999866553322111
Q ss_pred CcccccCCCcccccCCCCCHHHHHHhcCCCC--CHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEcc-CCcEEEeC
Q 001548 296 PASCWIGGLRQGSSDHGVNLREWLNARGHKG--KRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ-SNQVKYIG 372 (1056)
Q Consensus 296 ~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~--~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~-~~~vkl~D 372 (1056)
..+++++.|++|.+++......+ ++..++.++.||+.||.|||++||+||||||+||+++. .+.+|++|
T Consensus 81 --------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~d 152 (268)
T cd06624 81 --------KIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISD 152 (268)
T ss_pred --------EEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEec
Confidence 13789999999999997654334 77788999999999999999999999999999999976 67899999
Q ss_pred cchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCC
Q 001548 373 PIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIP 452 (1056)
Q Consensus 373 fgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~ 452 (1056)
||++.......
T Consensus 153 fg~~~~~~~~~--------------------------------------------------------------------- 163 (268)
T cd06624 153 FGTSKRLAGIN--------------------------------------------------------------------- 163 (268)
T ss_pred chhheecccCC---------------------------------------------------------------------
Confidence 99886543100
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCC--CCccchhHHHHHHHHHHhCCCC
Q 001548 453 HSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV--CTTSSNIYSLGVLFFELFGRFD 530 (1056)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~--~t~~sDIwSLGvlL~eLlt~f~ 530 (1056)
.......|++.|+|||.+.+.. ++.++|||||||++|+|+++..
T Consensus 164 ----------------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~ 209 (268)
T cd06624 164 ----------------------------------PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKP 209 (268)
T ss_pred ----------------------------------CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCC
Confidence 0000234678899999987644 7899999999999999998733
Q ss_pred cHHH----HHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 531 SERA----LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 531 ~~~~----~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
+... .............+......++.+.+|+.+||+++|.+|||+.+++.||||
T Consensus 210 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 210 PFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred CCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 3211 111111111122233333567789999999999999999999999999997
No 206
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.95 E-value=1.4e-27 Score=265.73 Aligned_cols=203 Identities=16% Similarity=0.208 Sum_probs=150.3
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG--HKGKRIECLYIFRQIVA 340 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~--~~~~~~~~~~i~~QIl~ 340 (1056)
...+....|||++.+......+... ..+|+|+. ++|.+++.... ..+++..++.++.||+.
T Consensus 50 ~~~l~~l~h~~i~~~~~~~~~~~~~----------------~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~ 112 (285)
T cd07861 50 ISLLKELQHPNIVCLQDVLMQESRL----------------YLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQ 112 (285)
T ss_pred HHHHHhcCCCCEeeeEEEEeeCCeE----------------EEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHH
Confidence 4567777899999877664321111 13788887 58999886532 46788899999999999
Q ss_pred HHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccc
Q 001548 341 LVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (1056)
Q Consensus 341 gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 420 (1056)
||.|||++||+||||||+||+++.++.+||+|||+++....+
T Consensus 113 ~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-------------------------------------- 154 (285)
T cd07861 113 GILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP-------------------------------------- 154 (285)
T ss_pred HHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCC--------------------------------------
Confidence 999999999999999999999999999999999988654310
Q ss_pred ccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccC
Q 001548 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (1056)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 500 (1056)
........++++|+|
T Consensus 155 -----------------------------------------------------------------~~~~~~~~~~~~y~a 169 (285)
T cd07861 155 -----------------------------------------------------------------VRVYTHEVVTLWYRA 169 (285)
T ss_pred -----------------------------------------------------------------cccccCCcccccccC
Confidence 000113457888999
Q ss_pred cccccCC-CCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhcc---------------------------CCCCC
Q 001548 501 PEELSGG-VCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRD---------------------------RILPP 549 (1056)
Q Consensus 501 PE~l~~~-~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~---------------------------~~lp~ 549 (1056)
||.+.+. .++.++|||||||++|||+++ |............++. ..+..
T Consensus 170 PE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (285)
T cd07861 170 PEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRS 249 (285)
T ss_pred hHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHH
Confidence 9998764 478999999999999999986 3332222221111110 00111
Q ss_pred CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 550 ~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
.....++++.+||.+||+.||.+|||+.+|+.||||
T Consensus 250 ~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 250 AVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred hcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 123467888999999999999999999999999997
No 207
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.95 E-value=3.7e-27 Score=262.07 Aligned_cols=201 Identities=14% Similarity=0.022 Sum_probs=149.5
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....||||+.+........ ....++++++|+|.+++......++...++.++.||+.||
T Consensus 60 ~~~l~~~~~~~i~~~~~~~~~~~-----------------~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L 122 (279)
T cd05109 60 AYVMAGVGSPYVCRLLGICLTST-----------------VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGM 122 (279)
T ss_pred HHHHHhcCCCCCceEEEEEcCCC-----------------cEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHH
Confidence 34456668999887654432111 1137889999999999987656678889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+|||+..++.+||+|||+++........
T Consensus 123 ~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~------------------------------------- 165 (279)
T cd05109 123 SYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE------------------------------------- 165 (279)
T ss_pred HHHHHCCeeccccccceEEEcCCCcEEECCCCceeecccccce-------------------------------------
Confidence 9999999999999999999999999999999998765410000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......++..|+|||
T Consensus 166 ----------------------------------------------------------------~~~~~~~~~~~y~~PE 181 (279)
T cd05109 166 ----------------------------------------------------------------YHADGGKVPIKWMALE 181 (279)
T ss_pred ----------------------------------------------------------------eecCCCccchhhCCHH
Confidence 0000123456699999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhC-CCCcHH--HHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFG-RFDSER--ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt-~f~~~~--~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~ei 579 (1056)
.+.+..++.++|||||||+||||++ +..++. ........+.....++.....++.+.+++.+||+.||.+||++.++
T Consensus 182 ~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l 261 (279)
T cd05109 182 SILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFREL 261 (279)
T ss_pred HhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 9999899999999999999999986 422211 1111222233333334445678889999999999999999999999
Q ss_pred hh
Q 001548 580 LQ 581 (1056)
Q Consensus 580 l~ 581 (1056)
+.
T Consensus 262 ~~ 263 (279)
T cd05109 262 VD 263 (279)
T ss_pred HH
Confidence 85
No 208
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.95 E-value=1.2e-27 Score=267.30 Aligned_cols=206 Identities=16% Similarity=0.201 Sum_probs=154.8
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~QIl~g 341 (1056)
..+++...|++++.+......+... ..+|+|++|++|.+++...+ ..+++..++.++.||+.|
T Consensus 51 ~~il~~l~~~~i~~~~~~~~~~~~~----------------~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~ 114 (285)
T cd05630 51 KQILEKVNSRFVVSLAYAYETKDAL----------------CLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCG 114 (285)
T ss_pred HHHHHhCCCCCeeeeeEEEecCCEE----------------EEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHH
Confidence 4567778899988765553322111 13899999999999985533 357788999999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|.|||+.||+||||||+||+++.++.++++|||++......
T Consensus 115 l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~--------------------------------------- 155 (285)
T cd05630 115 LEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG--------------------------------------- 155 (285)
T ss_pred HHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC---------------------------------------
Confidence 99999999999999999999999999999999987543200
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
......+||..|+||
T Consensus 156 -----------------------------------------------------------------~~~~~~~g~~~y~aP 170 (285)
T cd05630 156 -----------------------------------------------------------------QTIKGRVGTVGYMAP 170 (285)
T ss_pred -----------------------------------------------------------------ccccCCCCCccccCh
Confidence 000134688999999
Q ss_pred ccccCCCCCccchhHHHHHHHHHHhCCCCcHHH-----HHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCC-
Q 001548 502 EELSGGVCTTSSNIYSLGVLFFELFGRFDSERA-----LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT- 575 (1056)
Q Consensus 502 E~l~~~~~t~~sDIwSLGvlL~eLlt~f~~~~~-----~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt- 575 (1056)
|++.+..++.++|||||||++|||++|..++.. .......+............++.+.+|+.+||+.||.+|||
T Consensus 171 E~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~ 250 (285)
T cd05630 171 EVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGC 250 (285)
T ss_pred HHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHHHhhcCHHHccCC
Confidence 999999999999999999999999987333211 00111111111111122345788899999999999999999
Q ss_pred ----HHHHhhhhhhhhh
Q 001548 576 ----TREILQSEVTNEF 588 (1056)
Q Consensus 576 ----~~eil~~~~~~~~ 588 (1056)
+.|+++||||...
T Consensus 251 ~~~~~~~~~~h~~~~~~ 267 (285)
T cd05630 251 QGGGAREVKEHPLFKQI 267 (285)
T ss_pred CCCchHHHHcChhhhcc
Confidence 8999999999864
No 209
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.95 E-value=8.3e-28 Score=274.66 Aligned_cols=207 Identities=13% Similarity=0.096 Sum_probs=156.2
Q ss_pred hhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Q 001548 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (1056)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ 343 (1056)
.++....|++|+.+......+... ..+|||+.||+|.+++......+++..++.++.||+.||+
T Consensus 53 ~~l~~~~~~~i~~l~~~~~~~~~~----------------~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~ 116 (331)
T cd05624 53 NVLVNGDCQWITTLHYAFQDENYL----------------YLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIH 116 (331)
T ss_pred HHHHhCCCCCEeeEEEEEEcCCEE----------------EEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 456667899988765543322111 2489999999999999875556788899999999999999
Q ss_pred HhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccc
Q 001548 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (1056)
Q Consensus 344 ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 423 (1056)
|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 117 ~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~--------------------------------------- 157 (331)
T cd05624 117 SIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT--------------------------------------- 157 (331)
T ss_pred HHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCc---------------------------------------
Confidence 99999999999999999999999999999999866431000
Q ss_pred cccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCccc
Q 001548 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (1056)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 503 (1056)
......+||+.|+|||+
T Consensus 158 ---------------------------------------------------------------~~~~~~~gt~~y~aPE~ 174 (331)
T cd05624 158 ---------------------------------------------------------------VQSSVAVGTPDYISPEI 174 (331)
T ss_pred ---------------------------------------------------------------eeeccccCCcccCCHHH
Confidence 00013568999999999
Q ss_pred ccC-----CCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhcc---CCCCCCCCCCChhHHHHHHhccccCCCC
Q 001548 504 LSG-----GVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRD---RILPPSFLSENPKEAGFCLWQLHPEPLS 572 (1056)
Q Consensus 504 l~~-----~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~---~~lp~~~~~~~~~~~~li~~lL~~dP~~ 572 (1056)
+.+ +.++.++|||||||+||||++| |............... ..+|+.....++.+.+|+.+||..+|.+
T Consensus 175 ~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~ 254 (331)
T cd05624 175 LQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERR 254 (331)
T ss_pred HhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhh
Confidence 876 5688999999999999999986 4333222222222222 2244555567888999999999876655
Q ss_pred --CCCHHHHhhhhhhhhh
Q 001548 573 --RPTTREILQSEVTNEF 588 (1056)
Q Consensus 573 --Rpt~~eil~~~~~~~~ 588 (1056)
|++++++++|+||...
T Consensus 255 ~~~~~~~~~~~h~~f~~~ 272 (331)
T cd05624 255 LGQNGIEDFKKHAFFEGI 272 (331)
T ss_pred cCCCCHHHHhcCCCcCCC
Confidence 5799999999999763
No 210
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.95 E-value=1.7e-27 Score=269.14 Aligned_cols=204 Identities=20% Similarity=0.196 Sum_probs=153.5
Q ss_pred hhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Q 001548 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~g 341 (1056)
....+....||||+.+......+... ..+|||++|++|.++++..+ .+++..++.++.||+.|
T Consensus 49 E~~~l~~l~h~~iv~~~~~~~~~~~~----------------~lv~ey~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~ 111 (308)
T cd06615 49 ELKVLHECNSPYIVGFYGAFYSDGEI----------------SICMEHMDGGSLDQVLKKAG-RIPENILGKISIAVLRG 111 (308)
T ss_pred HHHHHHhCCCCCCCeEEEEEeeCCEE----------------EEEeeccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHH
Confidence 34567778999999877664432211 14899999999999997764 46677899999999999
Q ss_pred HHHhhh-cCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccc
Q 001548 342 VDYHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (1056)
Q Consensus 342 L~ylHs-~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 420 (1056)
|.|||+ ++|+||||||+|||++.++.+|++|||++.......
T Consensus 112 l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~------------------------------------- 154 (308)
T cd06615 112 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM------------------------------------- 154 (308)
T ss_pred HHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccccc-------------------------------------
Confidence 999997 599999999999999999999999999875432100
Q ss_pred ccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccC
Q 001548 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (1056)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 500 (1056)
....+|++.|+|
T Consensus 155 --------------------------------------------------------------------~~~~~~~~~~~a 166 (308)
T cd06615 155 --------------------------------------------------------------------ANSFVGTRSYMS 166 (308)
T ss_pred --------------------------------------------------------------------cccCCCCcCccC
Confidence 003467888999
Q ss_pred cccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccC--------------------------------
Q 001548 501 PEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDR-------------------------------- 545 (1056)
Q Consensus 501 PE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~-------------------------------- 545 (1056)
||.+.+..++.++|||||||++|||+++ |...... .....+...
T Consensus 167 PE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (308)
T cd06615 167 PERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK-ELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDY 245 (308)
T ss_pred hhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchh-hHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHH
Confidence 9999888899999999999999999986 3222111 111101000
Q ss_pred ---CCCCCCC--CCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001548 546 ---ILPPSFL--SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1056)
Q Consensus 546 ---~lp~~~~--~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~ 588 (1056)
..++..+ ..++.+++|+.+||.++|++|||+.++++||||...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 246 IVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred HhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 0011111 246778999999999999999999999999999764
No 211
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.95 E-value=3.2e-27 Score=264.48 Aligned_cols=203 Identities=16% Similarity=0.100 Sum_probs=152.5
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC---------------CCCC
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------------HKGK 327 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~---------------~~~~ 327 (1056)
...+....|||++.+.........+ ..+|+|++|++|.+++...+ ..++
T Consensus 58 ~~~l~~l~h~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~ 121 (291)
T cd05094 58 AELLTNLQHEHIVKFYGVCGDGDPL----------------IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 121 (291)
T ss_pred HHHHhcCCCCCcceEEEEEccCCce----------------EEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCC
Confidence 4567778999999866653321111 24899999999999997643 2367
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccc
Q 001548 328 RIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTT 407 (1056)
Q Consensus 328 ~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (1056)
...++.++.||+.||.|||++||+||||||+||+++.++.+|++|||+++........
T Consensus 122 ~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~---------------------- 179 (291)
T cd05094 122 LSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYY---------------------- 179 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCcee----------------------
Confidence 7789999999999999999999999999999999999999999999988764411000
Q ss_pred cccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccc
Q 001548 408 GIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQST 487 (1056)
Q Consensus 408 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (1056)
.
T Consensus 180 -------------------------------------------------------------------------------~ 180 (291)
T cd05094 180 -------------------------------------------------------------------------------R 180 (291)
T ss_pred -------------------------------------------------------------------------------e
Confidence 0
Q ss_pred cccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-CCCcH--HHHHHHHHhhccCCCCCCCCCCChhHHHHHHh
Q 001548 488 SVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSE--RALAAAMSDLRDRILPPSFLSENPKEAGFCLW 564 (1056)
Q Consensus 488 ~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~f~~~--~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~ 564 (1056)
.-....++..|+|||.+.+..++.++|||||||++|||++ +..++ ......+..+.....+......+..+.+|+.+
T Consensus 181 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 260 (291)
T cd05094 181 VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDIMLG 260 (291)
T ss_pred cCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCCCCCCCCccCCHHHHHHHHH
Confidence 0002346778999999999899999999999999999997 63321 11122333334444444444567789999999
Q ss_pred ccccCCCCCCCHHHHhhh
Q 001548 565 QLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 565 lL~~dP~~Rpt~~eil~~ 582 (1056)
||++||.+||++.++++.
T Consensus 261 ~l~~~P~~Rpt~~~v~~~ 278 (291)
T cd05094 261 CWQREPQQRLNIKEIYKI 278 (291)
T ss_pred HcccChhhCcCHHHHHHH
Confidence 999999999999999763
No 212
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.95 E-value=3.7e-27 Score=259.06 Aligned_cols=195 Identities=17% Similarity=0.137 Sum_probs=145.3
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....|||++.+......+... ..+|+|+.|++|.++|...+..++...++.++.||+.||
T Consensus 50 ~~~l~~~~h~~iv~~~~~~~~~~~~----------------~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l 113 (258)
T cd05078 50 ASMMSQLSHKHLVLNYGVCVCGDES----------------IMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWAL 113 (258)
T ss_pred HHHHHhCCCCChhheeeEEEeCCCc----------------EEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence 4567778899999876664432211 138999999999999988776788889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCc--------EEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQ--------VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~--------vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 414 (1056)
.|||++||+||||||+||+++.++. +|++|||++.....
T Consensus 114 ~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~--------------------------------- 160 (258)
T cd05078 114 HFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLP--------------------------------- 160 (258)
T ss_pred HHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCC---------------------------------
Confidence 9999999999999999999988765 46777765533210
Q ss_pred ccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCcccccccccccccccccc
Q 001548 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (1056)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 494 (1056)
.....+
T Consensus 161 --------------------------------------------------------------------------~~~~~~ 166 (258)
T cd05078 161 --------------------------------------------------------------------------KEILLE 166 (258)
T ss_pred --------------------------------------------------------------------------chhccc
Confidence 002346
Q ss_pred CCCccCcccccC-CCCCccchhHHHHHHHHHHhCC-CCcHHH--HHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCC
Q 001548 495 EKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR-FDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEP 570 (1056)
Q Consensus 495 t~~Y~APE~l~~-~~~t~~sDIwSLGvlL~eLlt~-f~~~~~--~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP 570 (1056)
+..|+|||++.+ ..++.++|||||||++|||+++ ..+... ........... +......++++.+|+.+||++||
T Consensus 167 ~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p 244 (258)
T cd05078 167 RIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYEDR--HQLPAPKWTELANLINQCMDYEP 244 (258)
T ss_pred cCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHcc--ccCCCCCcHHHHHHHHHHhccCh
Confidence 777999999987 4579999999999999999986 222211 11111111111 11222446789999999999999
Q ss_pred CCCCCHHHHhhh
Q 001548 571 LSRPTTREILQS 582 (1056)
Q Consensus 571 ~~Rpt~~eil~~ 582 (1056)
.+|||+++|++.
T Consensus 245 ~~Rps~~~il~~ 256 (258)
T cd05078 245 DFRPSFRAIIRD 256 (258)
T ss_pred hhCCCHHHHHHh
Confidence 999999999874
No 213
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.95 E-value=2.9e-25 Score=228.84 Aligned_cols=243 Identities=23% Similarity=0.348 Sum_probs=200.9
Q ss_pred eecCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCc
Q 001548 774 EFNNSANVICSISFDRD-EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGV 852 (1056)
Q Consensus 774 ~l~~h~~~V~sv~fspd-g~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~ 852 (1056)
.+.+|.+.|..++|+|- |..|||||.|+.|+||+... .++. .......-+|+..|.+++|+|. +++|++||.|.+
T Consensus 9 ~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~--~~s~-~ck~vld~~hkrsVRsvAwsp~-g~~La~aSFD~t 84 (312)
T KOG0645|consen 9 KLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSS--GDSW-TCKTVLDDGHKRSVRSVAWSPH-GRYLASASFDAT 84 (312)
T ss_pred eecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCC--CCcE-EEEEeccccchheeeeeeecCC-CcEEEEeeccce
Confidence 45699999999999998 89999999999999999873 1111 1111223479999999999998 889999999999
Q ss_pred EEEEEcCCC--ceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCc---eeEEEe-CCCCeEEEEEccCCC
Q 001548 853 VKLWDACTG--QTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKN---SLATIK-NIANVCCVQFSAHSS 926 (1056)
Q Consensus 853 V~lWD~~t~--~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~---~~~~~~-~~~~V~sv~fsp~~~ 926 (1056)
+.||.-..+ +++.++++|+..|-||+|++ +|++|||||.|++|-||.+..+. ++..++ |...|--|.|+|...
T Consensus 85 ~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~-sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~d 163 (312)
T KOG0645|consen 85 VVIWKKEDGEFECVATLEGHENEVKCVAWSA-SGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTED 163 (312)
T ss_pred EEEeecCCCceeEEeeeeccccceeEEEEcC-CCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcc
Confidence 999987655 58999999999999999999 99999999999999999998553 555665 778899999999986
Q ss_pred cEEEEEeCCCeEEEEEcCCCC--cceEEecCCCCCeEEEEEcC-CCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEec
Q 001548 927 HLLAFGSADYRTYCYDLRNAR--APWCVLAGHEKAVSYVKFLD-SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFS 1003 (1056)
Q Consensus 927 ~~lasGs~Dg~V~lwDlr~~~--~~~~~l~gH~~~V~~l~fs~-~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~ 1003 (1056)
+|+++|.|++|++|+-.... ....++.+|.+.|++++|++ +..|+||+.|++++||-+.. .+.
T Consensus 164 -lL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~-------------~~~ 229 (312)
T KOG0645|consen 164 -LLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYT-------------DLS 229 (312)
T ss_pred -eeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeecc-------------Ccc
Confidence 99999999999999765322 24688999999999999994 77899999999999998652 122
Q ss_pred -CCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCC
Q 001548 1004 -GHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSW 1048 (1056)
Q Consensus 1004 -gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~ 1048 (1056)
-|+..+..+. |. ...++++|.|+.++++.-+.
T Consensus 230 ~~~sr~~Y~v~-----------W~--~~~IaS~ggD~~i~lf~~s~ 262 (312)
T KOG0645|consen 230 GMHSRALYDVP-----------WD--NGVIASGGGDDAIRLFKESD 262 (312)
T ss_pred hhcccceEeee-----------ec--ccceEeccCCCEEEEEEecC
Confidence 3666666666 43 44568999999999987664
No 214
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.95 E-value=2.9e-27 Score=264.11 Aligned_cols=206 Identities=16% Similarity=0.194 Sum_probs=156.9
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~QIl~g 341 (1056)
..++....|++++.+......+... ..+|+|+.|++|.+++...+ ..++...+..++.||+.|
T Consensus 51 ~~il~~l~~~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~ 114 (285)
T cd05632 51 KQILEKVNSQFVVNLAYAYETKDAL----------------CLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCG 114 (285)
T ss_pred HHHHHHcCCcCceeEEEEEecCCEE----------------EEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 4577788899998765543322221 14899999999999886543 357888999999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|.|||++||+||||||+||+++.++.+|++|||++......
T Consensus 115 l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~--------------------------------------- 155 (285)
T cd05632 115 LEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG--------------------------------------- 155 (285)
T ss_pred HHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC---------------------------------------
Confidence 99999999999999999999999999999999987553200
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
.......|+..|+||
T Consensus 156 -----------------------------------------------------------------~~~~~~~g~~~~~aP 170 (285)
T cd05632 156 -----------------------------------------------------------------ESIRGRVGTVGYMAP 170 (285)
T ss_pred -----------------------------------------------------------------CcccCCCCCcCccCh
Confidence 000134688999999
Q ss_pred ccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHH---HHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCC
Q 001548 502 EELSGGVCTTSSNIYSLGVLFFELFGR---FDSERAL---AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT 575 (1056)
Q Consensus 502 E~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~---~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt 575 (1056)
|.+.+..++.++|||||||++|||+++ |...... ......+.. ..+......++.+.+|+.+||++||.+||+
T Consensus 171 E~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~R~~ 249 (285)
T cd05632 171 EVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLE-TEEVYSAKFSEEAKSICKMLLTKDPKQRLG 249 (285)
T ss_pred HHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhc-cccccCccCCHHHHHHHHHHccCCHhHcCC
Confidence 999998999999999999999999986 3322211 111111111 112223346778899999999999999999
Q ss_pred -----HHHHhhhhhhhhhh
Q 001548 576 -----TREILQSEVTNEFQ 589 (1056)
Q Consensus 576 -----~~eil~~~~~~~~~ 589 (1056)
+.+++.|+||....
T Consensus 250 ~~~~~~~~l~~~~~~~~~~ 268 (285)
T cd05632 250 CQEEGAGEVKRHPFFRNMN 268 (285)
T ss_pred CcccChHHHHcChhhhcCC
Confidence 89999999998863
No 215
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.95 E-value=2.7e-27 Score=263.42 Aligned_cols=178 Identities=18% Similarity=0.143 Sum_probs=137.2
Q ss_pred cccccCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccc
Q 001548 305 RQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESA 383 (1056)
Q Consensus 305 ~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~ 383 (1056)
..|+|+.+++|.+++... +..+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 96 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~ 175 (282)
T cd06636 96 LVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV 175 (282)
T ss_pred EEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhccc
Confidence 589999999999999663 3456777889999999999999999999999999999999999999999999886543100
Q ss_pred cCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccc
Q 001548 384 SLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHT 463 (1056)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~ 463 (1056)
T Consensus 176 -------------------------------------------------------------------------------- 175 (282)
T cd06636 176 -------------------------------------------------------------------------------- 175 (282)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCCCCCCccccccccccccccccccCCCccCccccc-----CCCCCccchhHHHHHHHHHHhCCCCcHH---HH
Q 001548 464 NAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS-----GGVCTTSSNIYSLGVLFFELFGRFDSER---AL 535 (1056)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-----~~~~t~~sDIwSLGvlL~eLlt~f~~~~---~~ 535 (1056)
......+|++.|+|||++. +..++.++|||||||++|||+++..++. ..
T Consensus 176 -----------------------~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~ 232 (282)
T cd06636 176 -----------------------GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM 232 (282)
T ss_pred -----------------------cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHH
Confidence 0001346888899999986 3568889999999999999998743332 11
Q ss_pred HHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 536 ~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
.......+...........++.+.+||.+||+.||.+||++.|||+||||
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 233 RALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred hhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 11111111111111222457789999999999999999999999999997
No 216
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=1.5e-25 Score=256.76 Aligned_cols=271 Identities=18% Similarity=0.208 Sum_probs=227.8
Q ss_pred ccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCccccc
Q 001548 741 IQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYY 820 (1056)
Q Consensus 741 ~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~ 820 (1056)
+|+....+..+.+..+-+|+..+.++..... -+...|+++.|+++|.+||+|..+|.|.|||.... ..
T Consensus 184 dWss~n~laValg~~vylW~~~s~~v~~l~~-----~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~-------k~ 251 (484)
T KOG0305|consen 184 DWSSANVLAVALGQSVYLWSASSGSVTELCS-----FGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQ-------KK 251 (484)
T ss_pred hcccCCeEEEEecceEEEEecCCCceEEeEe-----cCCCceEEEEECCCCCEEEEeecCCeEEEEehhhc-------cc
Confidence 4566667777888889999988877554443 22889999999999999999999999999998751 22
Q ss_pred ceEeec-CCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEE-EecCCCcEEEEEEecCCCCEEEEEeCCCcEEE
Q 001548 821 PAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSH-YIEHEKRAWSVDFSQVHPTKLASGSDDCSVKL 898 (1056)
Q Consensus 821 ~~~~~~-h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~-~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~I 898 (1056)
.....+ |...|.+++|+ ...+.+|+.||.|..+|++..+.... +.+|...|..+.|++ |+.++|+|+.|+.+.|
T Consensus 252 ~~~~~~~h~~rvg~laW~---~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~-d~~~lASGgnDN~~~I 327 (484)
T KOG0305|consen 252 TRTLRGSHASRVGSLAWN---SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSP-DGNQLASGGNDNVVFI 327 (484)
T ss_pred cccccCCcCceeEEEecc---CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECC-CCCeeccCCCccceEe
Confidence 222333 89999999999 56999999999999999998765544 889999999999999 9999999999999999
Q ss_pred EECCCCceeEEEe-CCCCeEEEEEccCCCcEEEEEe--CCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEE
Q 001548 899 WNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGS--ADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTA 974 (1056)
Q Consensus 899 WDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~lasGs--~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs-~~~~L~Sg 974 (1056)
||.....++..+. |.+.|..++|+|....+||+|+ .|++|++||..++.....+.. ..-|.+|.|+ ..+.|+++
T Consensus 328 wd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdt--gsQVcsL~Wsk~~kEi~st 405 (484)
T KOG0305|consen 328 WDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDT--GSQVCSLIWSKKYKELLST 405 (484)
T ss_pred ccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEeccccc--CCceeeEEEcCCCCEEEEe
Confidence 9998877777664 8899999999999888999986 799999999998876433333 4679999999 44445543
Q ss_pred E--CCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCC
Q 001548 975 S--TDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSW 1048 (1056)
Q Consensus 975 S--~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~ 1048 (1056)
- .++.|.||++. +...+..+.||+..|..++ ++|||..+++++.|.|+++|++.-
T Consensus 406 hG~s~n~i~lw~~p--------s~~~~~~l~gH~~RVl~la-----------~SPdg~~i~t~a~DETlrfw~~f~ 462 (484)
T KOG0305|consen 406 HGYSENQITLWKYP--------SMKLVAELLGHTSRVLYLA-----------LSPDGETIVTGAADETLRFWNLFD 462 (484)
T ss_pred cCCCCCcEEEEecc--------ccceeeeecCCcceeEEEE-----------ECCCCCEEEEecccCcEEeccccC
Confidence 3 58899999997 4678899999999999999 899999999999999999999764
No 217
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.94 E-value=6.3e-27 Score=265.16 Aligned_cols=240 Identities=15% Similarity=0.141 Sum_probs=164.8
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~QIl~g 341 (1056)
...+....||+|+.+......+.. ...+|+++.|++|.+++... +..+++..++.++.||+.|
T Consensus 52 ~~~l~~l~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~ 115 (316)
T cd05574 52 QEILATLDHPFLPTLYASFQTETY----------------LCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLA 115 (316)
T ss_pred HHHHHhCCCCCchhheeeeecCCE----------------EEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHH
Confidence 346677789999887655322111 12489999999999999753 3567888999999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|.|||++||+|+||||+||+++.++.++|+|||++............ ....
T Consensus 116 l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~---~~~~-------------------------- 166 (316)
T cd05574 116 LEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSK---ALRK-------------------------- 166 (316)
T ss_pred HHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccccc---cccc--------------------------
Confidence 99999999999999999999999999999999998765421100000 0000
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
.+..+...+.. ...............+||..|+||
T Consensus 167 ---------~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~g~~~y~aP 201 (316)
T cd05574 167 ---------GSRRSSVNSIP------------------------------------SETFSEEPSFRSNSFVGTEEYIAP 201 (316)
T ss_pred ---------ccccccccccc------------------------------------hhhhcccccCCCCCCcCccCCcCH
Confidence 00000000000 000000011112256799999999
Q ss_pred ccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCC---
Q 001548 502 EELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT--- 575 (1056)
Q Consensus 502 E~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt--- 575 (1056)
|++.+..++.++|||||||++|+|++| |...................+.....++.+.+|+.+||+.||.+||+
T Consensus 202 E~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~ 281 (316)
T cd05574 202 EVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKR 281 (316)
T ss_pred HHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchh
Confidence 999998899999999999999999986 43333333333333333222333336788999999999999999999
Q ss_pred -HHHHhhhhhhhhhhhhc
Q 001548 576 -TREILQSEVTNEFQEVC 592 (1056)
Q Consensus 576 -~~eil~~~~~~~~~~~~ 592 (1056)
+.++|+||||.......
T Consensus 282 ~~~~ll~~~~~~~~~~~~ 299 (316)
T cd05574 282 GAAEIKQHPFFRGVNWAL 299 (316)
T ss_pred hHHHHHcCchhhcCChhh
Confidence 99999999998865433
No 218
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.94 E-value=5.8e-27 Score=261.31 Aligned_cols=207 Identities=18% Similarity=0.178 Sum_probs=156.4
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR--GHKGKRIECLYIFRQIVA 340 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~--~~~~~~~~~~~i~~QIl~ 340 (1056)
...+....||||+.+......+.. ...+|||++|++|..++... ...+++..++.++.||+.
T Consensus 50 ~~~l~~~~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 113 (286)
T cd06622 50 LDILHKAVSPYIVDFYGAFFIEGA----------------VYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVK 113 (286)
T ss_pred HHHHHhcCCCcHHhhhhheecCCe----------------EEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHH
Confidence 456777789999876654222111 12489999999999998764 235788899999999999
Q ss_pred HHHHhhh-cCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccc
Q 001548 341 LVDYHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (1056)
Q Consensus 341 gL~ylHs-~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 419 (1056)
||.|||+ .||+||||||+||+++.++.+|++|||+++......
T Consensus 114 ~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~------------------------------------ 157 (286)
T cd06622 114 GLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL------------------------------------ 157 (286)
T ss_pred HHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc------------------------------------
Confidence 9999997 599999999999999999999999999886543100
Q ss_pred cccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCcc
Q 001548 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (1056)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 499 (1056)
.....+++.|+
T Consensus 158 ---------------------------------------------------------------------~~~~~~~~~y~ 168 (286)
T cd06622 158 ---------------------------------------------------------------------AKTNIGCQSYM 168 (286)
T ss_pred ---------------------------------------------------------------------cccCCCccCcc
Confidence 00234677899
Q ss_pred CcccccCC------CCCccchhHHHHHHHHHHhCC---CCcHH--HHHHHHHhhccCCCCCCCCCCChhHHHHHHhcccc
Q 001548 500 SPEELSGG------VCTTSSNIYSLGVLFFELFGR---FDSER--ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHP 568 (1056)
Q Consensus 500 APE~l~~~------~~t~~sDIwSLGvlL~eLlt~---f~~~~--~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~ 568 (1056)
|||.+.+. .++.++|||||||++|+|+++ |.... .....+..+.....+......++.+.+|+.+||++
T Consensus 169 aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 248 (286)
T cd06622 169 APERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNK 248 (286)
T ss_pred CcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHccc
Confidence 99998653 358899999999999999986 32221 12222333334444444455788899999999999
Q ss_pred CCCCCCCHHHHhhhhhhhhhhh
Q 001548 569 EPLSRPTTREILQSEVTNEFQE 590 (1056)
Q Consensus 569 dP~~Rpt~~eil~~~~~~~~~~ 590 (1056)
+|.+||++.+++.||||.....
T Consensus 249 ~p~~Rp~~~~l~~~~~~~~~~~ 270 (286)
T cd06622 249 IPNRRPTYAQLLEHPWLVKYKN 270 (286)
T ss_pred CcccCCCHHHHhcChhhhhccC
Confidence 9999999999999999987643
No 219
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.94 E-value=5.3e-27 Score=256.54 Aligned_cols=204 Identities=15% Similarity=0.109 Sum_probs=154.8
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...++...|||++.+......+.. ...+++++.|++|.+++...+..+++..++.++.||+.||
T Consensus 49 ~~~~~~l~~~~i~~~~~~~~~~~~----------------~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l 112 (256)
T cd06612 49 ISILKQCDSPYIVKYYGSYFKNTD----------------LWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGL 112 (256)
T ss_pred HHHHHhCCCCcEeeeeeeeecCCc----------------EEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHH
Confidence 345667799999876554332211 1248999999999999987777788889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+|+||+|+||+++.++.+|++|||++.......
T Consensus 113 ~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~--------------------------------------- 153 (256)
T cd06612 113 EYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM--------------------------------------- 153 (256)
T ss_pred HHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCc---------------------------------------
Confidence 99999999999999999999999999999999886643100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......|+..|+|||
T Consensus 154 ----------------------------------------------------------------~~~~~~~~~~~y~~PE 169 (256)
T cd06612 154 ----------------------------------------------------------------AKRNTVIGTPFWMAPE 169 (256)
T ss_pred ----------------------------------------------------------------cccccccCCccccCHH
Confidence 0000234677899999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCCCCcH---HHHHHHHHhhccCC-CCCCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGRFDSE---RALAAAMSDLRDRI-LPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~f~~~---~~~~~~~~~~~~~~-lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~e 578 (1056)
.+.+..++.++|||||||++|+|+++..+. .............. ........+..+.+|+.+||++||.+|||+.+
T Consensus 170 ~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~ 249 (256)
T cd06612 170 VIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQ 249 (256)
T ss_pred HHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHH
Confidence 999988999999999999999999873332 22222221111111 11112234577899999999999999999999
Q ss_pred Hhhhhhh
Q 001548 579 ILQSEVT 585 (1056)
Q Consensus 579 il~~~~~ 585 (1056)
+|+||||
T Consensus 250 il~~~~~ 256 (256)
T cd06612 250 LLQHPFI 256 (256)
T ss_pred HhcCCCC
Confidence 9999997
No 220
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.94 E-value=6e-27 Score=260.75 Aligned_cols=201 Identities=16% Similarity=0.082 Sum_probs=149.5
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC--------------CCCCH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG--------------HKGKR 328 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~--------------~~~~~ 328 (1056)
...+....||||+.+......... ...+|+|+.|++|.++|...+ ..++.
T Consensus 58 ~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~ 121 (280)
T cd05092 58 AELLTVLQHQHIVRFYGVCTEGRP----------------LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTL 121 (280)
T ss_pred HHHHhcCCCCCCceEEEEEecCCc----------------eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCH
Confidence 456777889999876554332111 124889999999999997653 23677
Q ss_pred HHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccc
Q 001548 329 IECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTG 408 (1056)
Q Consensus 329 ~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (1056)
..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 122 ~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~----------------------- 178 (280)
T cd05092 122 GQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY----------------------- 178 (280)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCcee-----------------------
Confidence 789999999999999999999999999999999999999999999988654310000
Q ss_pred ccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCcccccccccccc
Q 001548 409 IASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTS 488 (1056)
Q Consensus 409 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (1056)
..
T Consensus 179 ------------------------------------------------------------------------------~~ 180 (280)
T cd05092 179 ------------------------------------------------------------------------------RV 180 (280)
T ss_pred ------------------------------------------------------------------------------ec
Confidence 00
Q ss_pred ccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-CCCcH---HHHHHHHHhhccCCCCCCCCCCChhHHHHHHh
Q 001548 489 VSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSE---RALAAAMSDLRDRILPPSFLSENPKEAGFCLW 564 (1056)
Q Consensus 489 ~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~f~~~---~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~ 564 (1056)
.....+++.|+|||.+.+..++.++|||||||++|||++ +..++ ..... ...+..+..+......++.+.+|+.+
T Consensus 181 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~ 259 (280)
T cd05092 181 GGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA-IECITQGRELERPRTCPPEVYAIMQG 259 (280)
T ss_pred CCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH-HHHHHcCccCCCCCCCCHHHHHHHHH
Confidence 002234567999999999999999999999999999997 53332 12222 22222222233334567889999999
Q ss_pred ccccCCCCCCCHHHHhh
Q 001548 565 QLHPEPLSRPTTREILQ 581 (1056)
Q Consensus 565 lL~~dP~~Rpt~~eil~ 581 (1056)
||++||.+||++.+|++
T Consensus 260 cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 260 CWQREPQQRMVIKDIHS 276 (280)
T ss_pred HccCChhhCCCHHHHHH
Confidence 99999999999999986
No 221
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.94 E-value=1.7e-27 Score=294.80 Aligned_cols=208 Identities=16% Similarity=0.118 Sum_probs=154.8
Q ss_pred hhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhc---CCCCCHHHHHHHHHHH
Q 001548 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR---GHKGKRIECLYIFRQI 338 (1056)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~---~~~~~~~~~~~i~~QI 338 (1056)
...++....||||+.+.......... . -.++|+|++|++|.++|... ...+++..++.|+.||
T Consensus 62 EI~IL~~L~HPNIVrl~d~f~de~~~---------~-----lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QI 127 (1021)
T PTZ00266 62 EVNVMRELKHKNIVRYIDRFLNKANQ---------K-----LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQL 127 (1021)
T ss_pred HHHHHHHcCCCCcCeEEEEEEecCCC---------E-----EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHH
Confidence 35578888999999876653321110 0 12489999999999999653 2457888999999999
Q ss_pred HHHHHHhhhc-------CcccccCCCCCEEEccC-----------------CcEEEeCcchhhcccccccCCCCCCchhh
Q 001548 339 VALVDYHHTQ-------GVTFLDLKPSSFKLLQS-----------------NQVKYIGPIIQKETLESASLDIPHSENYR 394 (1056)
Q Consensus 339 l~gL~ylHs~-------gIvHrDLKP~NILl~~~-----------------~~vkl~Dfgla~~~~~~~~~~~~~~~~~~ 394 (1056)
+.||.|||+. +||||||||+||||+.. +.+||+|||+++.+...
T Consensus 128 L~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~------------ 195 (1021)
T PTZ00266 128 LHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIE------------ 195 (1021)
T ss_pred HHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccccc------------
Confidence 9999999995 49999999999999642 23788888877553310
Q ss_pred hhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCC
Q 001548 395 LRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSS 474 (1056)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~ 474 (1056)
T Consensus 196 -------------------------------------------------------------------------------- 195 (1021)
T PTZ00266 196 -------------------------------------------------------------------------------- 195 (1021)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccccccccccccccccCCCccCcccccC--CCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCC
Q 001548 475 SPLVSNTAQQQSTSVSEQLEEKWYASPEELSG--GVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPP 549 (1056)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~--~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~ 549 (1056)
......+||+.|+|||++.+ ..++.++|||||||+||||+++ |.........+..+...+..
T Consensus 196 ------------s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~l- 262 (1021)
T PTZ00266 196 ------------SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDL- 262 (1021)
T ss_pred ------------ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCC-
Confidence 00013578999999999965 4589999999999999999986 43333344444444433222
Q ss_pred CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001548 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1056)
Q Consensus 550 ~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~ 588 (1056)
.....++.+.+||..||+++|.+||++.++|+|+||...
T Consensus 263 pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 263 PIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence 123457889999999999999999999999999999754
No 222
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.94 E-value=7e-27 Score=261.26 Aligned_cols=201 Identities=17% Similarity=0.120 Sum_probs=150.5
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC------------CCCCHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG------------HKGKRIE 330 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~------------~~~~~~~ 330 (1056)
...+....|||++.+......+.. -..+++|++|++|.++|...+ ..+++..
T Consensus 58 ~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~ 121 (288)
T cd05093 58 AELLTNLQHEHIVKFYGVCVEGDP----------------LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQ 121 (288)
T ss_pred HHHHHhCCCCCcceEEEEEecCCc----------------cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHH
Confidence 456777789999976655332111 124899999999999997543 2478889
Q ss_pred HHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccc
Q 001548 331 CLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIA 410 (1056)
Q Consensus 331 ~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (1056)
++.++.||+.||+|||++||+||||||+||+++.++.+|++|||+++........
T Consensus 122 ~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~------------------------- 176 (288)
T cd05093 122 MLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYY------------------------- 176 (288)
T ss_pred HHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccCCccccccCCcee-------------------------
Confidence 9999999999999999999999999999999999999999999988764310000
Q ss_pred ccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCcccccccccccccc
Q 001548 411 SAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVS 490 (1056)
Q Consensus 411 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (1056)
....
T Consensus 177 ----------------------------------------------------------------------------~~~~ 180 (288)
T cd05093 177 ----------------------------------------------------------------------------RVGG 180 (288)
T ss_pred ----------------------------------------------------------------------------ecCC
Confidence 0000
Q ss_pred ccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-CCCc---HHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhcc
Q 001548 491 EQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDS---ERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQL 566 (1056)
Q Consensus 491 ~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~f~~---~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL 566 (1056)
...++..|+|||.+.+..++.++|||||||++|||++ +..+ ..... ....+.....++.....++.+.+|+.+||
T Consensus 181 ~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~l~~li~~~l 259 (288)
T cd05093 181 HTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-VIECITQGRVLQRPRTCPKEVYDLMLGCW 259 (288)
T ss_pred CCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHcCCcCCCCCCCCHHHHHHHHHHc
Confidence 2335677999999998889999999999999999997 5322 22222 22223333333333456788999999999
Q ss_pred ccCCCCCCCHHHHhh
Q 001548 567 HPEPLSRPTTREILQ 581 (1056)
Q Consensus 567 ~~dP~~Rpt~~eil~ 581 (1056)
++||.+|||+.+++.
T Consensus 260 ~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 260 QREPHMRLNIKEIHS 274 (288)
T ss_pred cCChhhCCCHHHHHH
Confidence 999999999999965
No 223
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.94 E-value=4.7e-27 Score=261.53 Aligned_cols=205 Identities=19% Similarity=0.242 Sum_probs=153.3
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....|||++.+......... ...+++++ |++|.+++......+++..++.++.||+.||
T Consensus 50 ~~~l~~~~~~~i~~~~~~~~~~~~----------------~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l 112 (286)
T cd07832 50 IKALQACQHPYVVKLLDVFPHGSG----------------FVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGV 112 (286)
T ss_pred HHHHHhCCCCCCcceeeEEecCCe----------------eEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 346667789999987665332111 12378899 9999999977667788889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+|+||||+||+++.++.++++|||++.......
T Consensus 113 ~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~--------------------------------------- 153 (286)
T cd07832 113 AYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEE--------------------------------------- 153 (286)
T ss_pred HHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC---------------------------------------
Confidence 99999999999999999999999999999999886643100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
........|+.+|+|||
T Consensus 154 ---------------------------------------------------------------~~~~~~~~~~~~y~aPE 170 (286)
T cd07832 154 ---------------------------------------------------------------PRLYSHQVATRWYRAPE 170 (286)
T ss_pred ---------------------------------------------------------------CCccccccCcccccCce
Confidence 00011456889999999
Q ss_pred cccCC-CCCccchhHHHHHHHHHHhCC---CCcHHHHHHH---HHhhccC-----------------CC--------CCC
Q 001548 503 ELSGG-VCTTSSNIYSLGVLFFELFGR---FDSERALAAA---MSDLRDR-----------------IL--------PPS 550 (1056)
Q Consensus 503 ~l~~~-~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~---~~~~~~~-----------------~l--------p~~ 550 (1056)
.+.+. .++.++|||||||++|||+++ |.+....... +..+... .. ...
T Consensus 171 ~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (286)
T cd07832 171 LLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEI 250 (286)
T ss_pred eeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHh
Confidence 98764 468999999999999999987 3332222111 1111000 00 011
Q ss_pred CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhh
Q 001548 551 FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (1056)
Q Consensus 551 ~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~ 586 (1056)
+...+..+.+|+.+||+++|.+||+++++|+||||.
T Consensus 251 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 251 FPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred CCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 234567788999999999999999999999999984
No 224
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.94 E-value=6.4e-27 Score=257.95 Aligned_cols=208 Identities=17% Similarity=0.178 Sum_probs=157.1
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+......+... ..++++++|++|.++++..+ .++...+..++.||+.||
T Consensus 57 ~~~l~~l~h~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~l~~~l 119 (267)
T cd06628 57 IALLKELQHENIVQYLGSSLDADHL----------------NIFLEYVPGGSVAALLNNYG-AFEETLVRNFVRQILKGL 119 (267)
T ss_pred HHHHHhcCCCCeeeEEEEEEeCCcc----------------EEEEEecCCCCHHHHHHhcc-CccHHHHHHHHHHHHHHH
Confidence 3457777899999876653322111 13789999999999997764 466778999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
+|||++||+||||||+||+++.++.+||+|||+++.........
T Consensus 120 ~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~------------------------------------ 163 (267)
T cd06628 120 NYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLST------------------------------------ 163 (267)
T ss_pred HHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccccccC------------------------------------
Confidence 99999999999999999999999999999999987654110000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
..........|+..|+|||
T Consensus 164 -------------------------------------------------------------~~~~~~~~~~~~~~y~~pe 182 (267)
T cd06628 164 -------------------------------------------------------------KTNGARPSLQGSVFWMAPE 182 (267)
T ss_pred -------------------------------------------------------------CccccccccCCCcCccChh
Confidence 0000001345788899999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~ei 579 (1056)
.+.+..++.++|+|||||++|+|+++ |.......... .+.....+......+..+.+++.+||++||.+||++.+|
T Consensus 183 ~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i 261 (267)
T cd06628 183 VVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIF-KIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAEL 261 (267)
T ss_pred HhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHH-HHhccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHH
Confidence 99988899999999999999999986 43333322222 222233333344567888999999999999999999999
Q ss_pred hhhhhh
Q 001548 580 LQSEVT 585 (1056)
Q Consensus 580 l~~~~~ 585 (1056)
++||||
T Consensus 262 l~~~~~ 267 (267)
T cd06628 262 LKHPFL 267 (267)
T ss_pred hhCCCC
Confidence 999997
No 225
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.94 E-value=7.5e-27 Score=262.36 Aligned_cols=206 Identities=15% Similarity=0.130 Sum_probs=156.5
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....|||++.+.+....+.. ...+++|++|++|.+++... .++..++..++.||+.||
T Consensus 68 ~~~l~~~~h~~v~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL 129 (296)
T cd06654 68 ILVMRENKNPNIVNYLDSYLVGDE----------------LWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQAL 129 (296)
T ss_pred HHHHHhCCCCCEeeEEEEEEeCCE----------------EEEeecccCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHH
Confidence 345677789999887655332111 12489999999999999653 467778999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 130 ~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~--------------------------------------- 170 (296)
T cd06654 130 EFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--------------------------------------- 170 (296)
T ss_pred HHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccc---------------------------------------
Confidence 99999999999999999999999999999999876543100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......|++.|+|||
T Consensus 171 ----------------------------------------------------------------~~~~~~~~~~~y~aPE 186 (296)
T cd06654 171 ----------------------------------------------------------------SKRSTMVGTPYWMAPE 186 (296)
T ss_pred ----------------------------------------------------------------cccCcccCCccccCHH
Confidence 0001345788899999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCC-CCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILP-PSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp-~~~~~~~~~~~~li~~lL~~dP~~Rpt~~e 578 (1056)
.+.+..++.++|||||||++|+|++| |..................+ +.....++.+.+|+.+||.++|..||++.+
T Consensus 187 ~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~e 266 (296)
T cd06654 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKE 266 (296)
T ss_pred HHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHH
Confidence 99988899999999999999999987 33332222222222222211 223356678899999999999999999999
Q ss_pred Hhhhhhhhhhh
Q 001548 579 ILQSEVTNEFQ 589 (1056)
Q Consensus 579 il~~~~~~~~~ 589 (1056)
|++||||....
T Consensus 267 il~~~~~~~~~ 277 (296)
T cd06654 267 LLQHQFLKIAK 277 (296)
T ss_pred HhhChhhhccC
Confidence 99999997653
No 226
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.94 E-value=6.7e-27 Score=257.05 Aligned_cols=203 Identities=13% Similarity=0.064 Sum_probs=152.9
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..+++...||||+.+......+. -..+|||++|++|.+++......+++..++.++.||+.||
T Consensus 46 ~~~l~~l~h~~ii~~~~~~~~~~-----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l 108 (257)
T cd05115 46 AEIMHQLDNPYIVRMIGVCEAEA-----------------LMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGM 108 (257)
T ss_pred HHHHHhcCCCCeEEEEEEEcCCC-----------------eEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 45777889999998766432110 1138999999999999977666788889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+||+++.++.+|++|||+++........
T Consensus 109 ~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~------------------------------------- 151 (257)
T cd05115 109 KYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY------------------------------------- 151 (257)
T ss_pred HHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccc-------------------------------------
Confidence 9999999999999999999999999999999988754310000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
....+...++..|+|||
T Consensus 152 ---------------------------------------------------------------~~~~~~~~~~~~y~aPE 168 (257)
T cd05115 152 ---------------------------------------------------------------YKARSAGKWPLKWYAPE 168 (257)
T ss_pred ---------------------------------------------------------------eeccCCCCCCcccCCHH
Confidence 00000122356799999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhC-CCCcHH--HHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFG-RFDSER--ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt-~f~~~~--~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~ei 579 (1056)
.+.+..++.++|||||||++|||++ +..++. ........+.....++.....++++.+++..||.++|.+||++.+|
T Consensus 169 ~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i 248 (257)
T cd05115 169 CINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKV 248 (257)
T ss_pred HHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 9998889999999999999999995 533221 1122333333333344445668889999999999999999999999
Q ss_pred hhh
Q 001548 580 LQS 582 (1056)
Q Consensus 580 l~~ 582 (1056)
++.
T Consensus 249 ~~~ 251 (257)
T cd05115 249 EER 251 (257)
T ss_pred HHH
Confidence 764
No 227
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=1.9e-27 Score=242.96 Aligned_cols=249 Identities=16% Similarity=0.125 Sum_probs=174.5
Q ss_pred HHHhhhcc-cc-ceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCc
Q 001548 214 FFVKTTLK-GK-GIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1056)
Q Consensus 214 ~~~k~~~~-g~-Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1056)
|-+-+-|+ || |-||.+..........--+..+.........-|.++. ..+-.+++||||.++-.... +
T Consensus 24 feigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrRE--iEIqs~L~hpnilrlY~~fh-----d--- 93 (281)
T KOG0580|consen 24 FEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRRE--IEIQSHLRHPNILRLYGYFH-----D--- 93 (281)
T ss_pred ccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhhe--eEeecccCCccHHhhhhhee-----c---
Confidence 44544443 66 9999998743322200000000001111111222222 23345679999886444322 1
Q ss_pred CCCCCcccccCCCcccccCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEE
Q 001548 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNA-RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1056)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~-~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl 370 (1056)
..+++ ..+||..+|+|...|.. ....+++..+..|++|++.||.|||..+||||||||+|+|++..|.+|+
T Consensus 94 ~~riy--------LilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lki 165 (281)
T KOG0580|consen 94 SKRIY--------LILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKI 165 (281)
T ss_pred cceeE--------EEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeec
Confidence 22221 37889999999999964 3456788899999999999999999999999999999999999999999
Q ss_pred eCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccC
Q 001548 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1056)
Q Consensus 371 ~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g 450 (1056)
+|||-+-....
T Consensus 166 AdfGwsV~~p~--------------------------------------------------------------------- 176 (281)
T KOG0580|consen 166 ADFGWSVHAPS--------------------------------------------------------------------- 176 (281)
T ss_pred cCCCceeecCC---------------------------------------------------------------------
Confidence 99996533110
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCC--
Q 001548 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR-- 528 (1056)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~-- 528 (1056)
..-.+.|||.-|.+||...+..++..+|+|++|++.||+|.|
T Consensus 177 ------------------------------------~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~p 220 (281)
T KOG0580|consen 177 ------------------------------------NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLP 220 (281)
T ss_pred ------------------------------------CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCC
Confidence 001168999999999999999999999999999999999976
Q ss_pred -CCcHHHHHHHHHhhc-cCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001548 529 -FDSERALAAAMSDLR-DRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1056)
Q Consensus 529 -f~~~~~~~~~~~~~~-~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~ 588 (1056)
|.+... ....+.++ -....| ...+...++||.+||.++|.+|.+..|++.|||+...
T Consensus 221 pFes~~~-~etYkrI~k~~~~~p--~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 221 PFESQSH-SETYKRIRKVDLKFP--STISGGAADLISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred chhhhhh-HHHHHHHHHccccCC--cccChhHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence 544443 33333333 233223 5668889999999999999999999999999998653
No 228
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.94 E-value=9.8e-27 Score=254.33 Aligned_cols=240 Identities=15% Similarity=0.126 Sum_probs=164.1
Q ss_pred ccccceeeeCCCC-CccccccccccccccccccCCchhHH-HHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCc
Q 001548 220 LKGKGIVCRGPPL-NAFKERRGMIDTKAFVTTTMPSDAAL-KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1056)
Q Consensus 220 ~~g~Gvv~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1056)
.++.|.||++... ++..+ ..+......+.+... -.....+++...||||+.+.........
T Consensus 5 ~g~~g~vy~~~~~~~~~~~------a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------- 67 (252)
T cd05084 5 RGNFGEVFSGRLRADNTPV------AVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP----------- 67 (252)
T ss_pred cccCccEEEEEEecCCceE------EEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCC-----------
Confidence 4578999998752 11111 111112222222211 2222346777899999986655332111
Q ss_pred ccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhh
Q 001548 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1056)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~ 377 (1056)
...+|+|+.|++|.+++...+..+++..++.++.||+.||.|||++||+||||||+||+++.++.+|++|||+++
T Consensus 68 -----~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 142 (252)
T cd05084 68 -----IYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSR 142 (252)
T ss_pred -----eEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCc
Confidence 124889999999999998766677888999999999999999999999999999999999999999999999886
Q ss_pred cccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCC
Q 001548 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1056)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~ 457 (1056)
........
T Consensus 143 ~~~~~~~~------------------------------------------------------------------------ 150 (252)
T cd05084 143 EEEDGVYA------------------------------------------------------------------------ 150 (252)
T ss_pred cccccccc------------------------------------------------------------------------
Confidence 53310000
Q ss_pred cccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-CCCcHH--H
Q 001548 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSER--A 534 (1056)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~f~~~~--~ 534 (1056)
........+..|+|||.+.++.++.++|||||||++|||++ +..+.. .
T Consensus 151 -----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~ 201 (252)
T cd05084 151 -----------------------------STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLS 201 (252)
T ss_pred -----------------------------ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccC
Confidence 00001112345999999999889999999999999999996 432221 1
Q ss_pred HHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001548 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 535 ~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~ 582 (1056)
.......+.....++.....+..+.+|+.+||+++|.+|||+.++++.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~ 249 (252)
T cd05084 202 NQQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQE 249 (252)
T ss_pred HHHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 111222222222223334557788999999999999999999999863
No 229
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.94 E-value=1.2e-26 Score=255.88 Aligned_cols=202 Identities=14% Similarity=0.140 Sum_probs=152.2
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....|||++.+......+... ...|++++|++|.+++......++...++.++.|++.||
T Consensus 56 ~~~l~~l~h~~i~~~~~~~~~~~~~----------------~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l 119 (266)
T cd05033 56 ASIMGQFDHPNIIRLEGVVTKSRPV----------------MIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGM 119 (266)
T ss_pred HHHHHhCCCCCcceEeEEEecCCce----------------EEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence 4567777899998765543211111 138999999999999977655778889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+|+||||+||+++.++.+|++|||+++........
T Consensus 120 ~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~------------------------------------- 162 (266)
T cd05033 120 KYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEAT------------------------------------- 162 (266)
T ss_pred HHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccccc-------------------------------------
Confidence 9999999999999999999999999999999998775410000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
. . .....++..|+|||
T Consensus 163 --------------------------------------~-------------------------~-~~~~~~~~~y~~Pe 178 (266)
T cd05033 163 --------------------------------------Y-------------------------T-TKGGKIPIRWTAPE 178 (266)
T ss_pred --------------------------------------e-------------------------e-ccCCCCCccccChh
Confidence 0 0 00122456799999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~e 578 (1056)
.+.+..++.++|||||||++|||++ + |.... .......+.....++.....++.+.+|+.+||+.+|.+||++.+
T Consensus 179 ~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e 257 (266)
T cd05033 179 AIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMS-NQDVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQ 257 (266)
T ss_pred hhccCCCccccchHHHHHHHHHHHccCCCCCCCCC-HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHH
Confidence 9998889999999999999999986 4 32222 12222333333233334466788999999999999999999999
Q ss_pred Hhhh
Q 001548 579 ILQS 582 (1056)
Q Consensus 579 il~~ 582 (1056)
|+++
T Consensus 258 i~~~ 261 (266)
T cd05033 258 IVST 261 (266)
T ss_pred HHHH
Confidence 9875
No 230
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=3.7e-26 Score=264.27 Aligned_cols=250 Identities=19% Similarity=0.279 Sum_probs=218.9
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEE
Q 001548 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLW 856 (1056)
Q Consensus 777 ~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lW 856 (1056)
..+..|.+++|||....+.|+-.+|.|++||+.- ......+..|.++|..++|+|. +.+|+||+.|-+|++|
T Consensus 7 skSsRvKglsFHP~rPwILtslHsG~IQlWDYRM-------~tli~rFdeHdGpVRgv~FH~~-qplFVSGGDDykIkVW 78 (1202)
T KOG0292|consen 7 SKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRM-------GTLIDRFDEHDGPVRGVDFHPT-QPLFVSGGDDYKIKVW 78 (1202)
T ss_pred cccccccceecCCCCCEEEEeecCceeeeehhhh-------hhHHhhhhccCCccceeeecCC-CCeEEecCCccEEEEE
Confidence 4567899999999999999999999999999863 2333455689999999999998 8999999999999999
Q ss_pred EcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEEEeCC
Q 001548 857 DACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSAD 935 (1056)
Q Consensus 857 D~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~lasGs~D 935 (1056)
+..+.+|+.++.+|.+-|..+.|++ .-.+++|+|+|.||+||+..+++++..+. |+.-|.|.+|+|... +++++|-|
T Consensus 79 nYk~rrclftL~GHlDYVRt~~FHh-eyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptED-lIVSaSLD 156 (1202)
T KOG0292|consen 79 NYKTRRCLFTLLGHLDYVRTVFFHH-EYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTED-LIVSASLD 156 (1202)
T ss_pred ecccceehhhhccccceeEEeeccC-CCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccc-eEEEeccc
Confidence 9999999999999999999999999 77789999999999999999999999997 667899999999876 99999999
Q ss_pred CeEEEEEcCCCCc----------------------------ceEEecCCCCCeEEEEEcC-CCEEEEEECCCeEEEEECC
Q 001548 936 YRTYCYDLRNARA----------------------------PWCVLAGHEKAVSYVKFLD-SGTLVTASTDNKLKLWDLK 986 (1056)
Q Consensus 936 g~V~lwDlr~~~~----------------------------~~~~l~gH~~~V~~l~fs~-~~~L~SgS~Dg~IkiWdl~ 986 (1056)
.+|++||+...+. .-.++.||...|+.++|+| --.|+||+.|+.||+|..+
T Consensus 157 QTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmn 236 (1202)
T KOG0292|consen 157 QTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMN 236 (1202)
T ss_pred ceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEec
Confidence 9999999753221 1256789999999999985 3569999999999999987
Q ss_pred CCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCCeEEE
Q 001548 987 RTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWGCLLL 1053 (1056)
Q Consensus 987 ~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~~~~~ 1053 (1056)
.. +...+-+..||.+.|.++- |+|.-..+++.|-|++++|||+..++.+-
T Consensus 237 et------KaWEvDtcrgH~nnVssvl-----------fhp~q~lIlSnsEDksirVwDm~kRt~v~ 286 (1202)
T KOG0292|consen 237 ET------KAWEVDTCRGHYNNVSSVL-----------FHPHQDLILSNSEDKSIRVWDMTKRTSVQ 286 (1202)
T ss_pred cc------cceeehhhhcccCCcceEE-----------ecCccceeEecCCCccEEEEeccccccee
Confidence 43 2345677889999998877 78888888999999999999999887653
No 231
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.94 E-value=5.6e-27 Score=258.59 Aligned_cols=247 Identities=17% Similarity=0.191 Sum_probs=168.1
Q ss_pred hhHHHhhhcc--ccceeeeCCCC-CccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCC
Q 001548 212 SEFFVKTTLK--GKGIVCRGPPL-NAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLD 288 (1056)
Q Consensus 212 ~~~~~k~~~~--g~Gvv~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1056)
..|-+.+.++ +.|.||+|... ++..+ ..+ ........+...-......+....||||+.+......+...
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~-----aik-~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~- 81 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELA-----AVK-IIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKL- 81 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEE-----EEE-EEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE-
Confidence 3466666664 67999999752 11111 111 11101111111111224567778999999765543322111
Q ss_pred CCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcE
Q 001548 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368 (1056)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~v 368 (1056)
..+|++++|++|.+++...+ .+++..+..++.||+.||+|||+.||+||||||+||+++.++.+
T Consensus 82 ---------------~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~ 145 (267)
T cd06646 82 ---------------WICMEYCGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDV 145 (267)
T ss_pred ---------------EEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCE
Confidence 13899999999999997654 46777999999999999999999999999999999999999999
Q ss_pred EEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccc
Q 001548 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1056)
Q Consensus 369 kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d 448 (1056)
|++|||+++......
T Consensus 146 ~l~dfg~~~~~~~~~----------------------------------------------------------------- 160 (267)
T cd06646 146 KLADFGVAAKITATI----------------------------------------------------------------- 160 (267)
T ss_pred EECcCccceeecccc-----------------------------------------------------------------
Confidence 999999987643100
Q ss_pred cCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCccccc---CCCCCccchhHHHHHHHHHH
Q 001548 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS---GGVCTTSSNIYSLGVLFFEL 525 (1056)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~---~~~~t~~sDIwSLGvlL~eL 525 (1056)
.......|+..|+|||.+. ...++.++|||||||++|||
T Consensus 161 --------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el 202 (267)
T cd06646 161 --------------------------------------AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIEL 202 (267)
T ss_pred --------------------------------------cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHH
Confidence 0000345778899999985 34578899999999999999
Q ss_pred hCCCCcHHH---HHHHHHhhccCCCCCCC---CCCChhHHHHHHhccccCCCCCCCHHHHhhhhh
Q 001548 526 FGRFDSERA---LAAAMSDLRDRILPPSF---LSENPKEAGFCLWQLHPEPLSRPTTREILQSEV 584 (1056)
Q Consensus 526 lt~f~~~~~---~~~~~~~~~~~~lp~~~---~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~ 584 (1056)
+++..+... .............++.+ ...++.+.+|+.+||..+|.+||++++||+|+|
T Consensus 203 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 203 AELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred HhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 987433211 11111111111122222 245678899999999999999999999999987
No 232
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.94 E-value=9e-27 Score=258.71 Aligned_cols=202 Identities=17% Similarity=0.239 Sum_probs=145.4
Q ss_pred hhhccC-CCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 264 MMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 264 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..+... .|||++.+......+.. ... ..+|++++| +|.+++......+++..++.++.||+.||
T Consensus 49 ~~l~~l~~h~~i~~~~~~~~~~~~-------~~~-------~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L 113 (282)
T cd07831 49 QALRRLSPHPNILRLIEVLFDRKT-------GRL-------ALVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSL 113 (282)
T ss_pred HHHhhcCCCCCccceEEEEecCCC-------CcE-------EEEEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence 344444 59999886655332200 011 136778764 88888877656778889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||+.||+||||||+||+++. +.+||+|||+++......
T Consensus 114 ~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~--------------------------------------- 153 (282)
T cd07831 114 DHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP--------------------------------------- 153 (282)
T ss_pred HHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCC---------------------------------------
Confidence 9999999999999999999999 999999999886543100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
..+...++.+|+|||
T Consensus 154 -----------------------------------------------------------------~~~~~~~~~~y~aPE 168 (282)
T cd07831 154 -----------------------------------------------------------------PYTEYISTRWYRAPE 168 (282)
T ss_pred -----------------------------------------------------------------CcCCCCCCcccCChh
Confidence 001345788899999
Q ss_pred cccC-CCCCccchhHHHHHHHHHHhCC---CCcHHHHHHH--HHhhccC-----------------CCCC--------CC
Q 001548 503 ELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERALAAA--MSDLRDR-----------------ILPP--------SF 551 (1056)
Q Consensus 503 ~l~~-~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~--~~~~~~~-----------------~lp~--------~~ 551 (1056)
++.. ..++.++|||||||++|||+++ |......... ....... ..|+ ..
T Consensus 169 ~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (282)
T cd07831 169 CLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLL 248 (282)
T ss_pred HhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHc
Confidence 8755 4578999999999999999986 4332221111 1110000 0111 11
Q ss_pred CCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 552 LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 552 ~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
...+..+.+||.+||+++|++||++.++++||||
T Consensus 249 ~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 249 PNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred ccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 2456788999999999999999999999999997
No 233
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.94 E-value=6.1e-27 Score=262.61 Aligned_cols=252 Identities=18% Similarity=0.200 Sum_probs=173.7
Q ss_pred hHHHhhhccccceeeeCCCCC-ccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCc
Q 001548 213 EFFVKTTLKGKGIVCRGPPLN-AFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1056)
Q Consensus 213 ~~~~k~~~~g~Gvv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1056)
..+.+-..+|+|.||++.... +..+ ..+ ............-......++...|||++.+........
T Consensus 25 ~~~~~lg~g~~g~v~~~~~~~~~~~v-----aiK-~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~------ 92 (292)
T cd06658 25 DSFIKIGEGSTGIVCIATEKHTGKQV-----AVK-KMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGD------ 92 (292)
T ss_pred hhhhcccCCCCeEEEEEEECCCCCEE-----EEE-EEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCC------
Confidence 334566677889999986421 1111 111 111011111111112234567778999887655422111
Q ss_pred CCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEe
Q 001548 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1056)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~ 371 (1056)
....+|++++|++|.+++... .++..++..++.||+.||+|||++||+||||||+||+++.++.+||+
T Consensus 93 ----------~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~ 160 (292)
T cd06658 93 ----------ELWVVMEFLEGGALTDIVTHT--RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLS 160 (292)
T ss_pred ----------eEEEEEeCCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEc
Confidence 112489999999999998543 46777999999999999999999999999999999999999999999
Q ss_pred CcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCC
Q 001548 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1056)
Q Consensus 372 Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~ 451 (1056)
|||++.......
T Consensus 161 dfg~~~~~~~~~-------------------------------------------------------------------- 172 (292)
T cd06658 161 DFGFCAQVSKEV-------------------------------------------------------------------- 172 (292)
T ss_pred cCcchhhccccc--------------------------------------------------------------------
Confidence 999886543100
Q ss_pred CCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCC---
Q 001548 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR--- 528 (1056)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~--- 528 (1056)
.......|+..|+|||.+.+..++.++|||||||++|||++|
T Consensus 173 -----------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p 217 (292)
T cd06658 173 -----------------------------------PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 217 (292)
T ss_pred -----------------------------------ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 000134678899999999988899999999999999999986
Q ss_pred CCcHHHHHHHHHhhccCC--CCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhhhc
Q 001548 529 FDSERALAAAMSDLRDRI--LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (1056)
Q Consensus 529 f~~~~~~~~~~~~~~~~~--lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~~~ 592 (1056)
|....... .+..+.... ..+.....++.+.+|+.+||.+||.+|||+.++++||||.....+.
T Consensus 218 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~ 282 (292)
T cd06658 218 YFNEPPLQ-AMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPS 282 (292)
T ss_pred CCCCCHHH-HHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCcc
Confidence 33222221 122222211 1122234577889999999999999999999999999998765544
No 234
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.94 E-value=9.4e-27 Score=259.01 Aligned_cols=199 Identities=19% Similarity=0.175 Sum_probs=150.8
Q ss_pred hhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Q 001548 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (1056)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ 343 (1056)
..+....|||++.+......+... ...|||++|++|..+. .+++..+..++.||+.||+
T Consensus 51 ~~l~~l~h~~iv~~~~~~~~~~~~----------------~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~ 109 (279)
T cd06619 51 EILYKCDSPYIIGFYGAFFVENRI----------------SICTEFMDGGSLDVYR-----KIPEHVLGRIAVAVVKGLT 109 (279)
T ss_pred HHHHhCCCCCeeeEEEEEEECCEE----------------EEEEecCCCCChHHhh-----cCCHHHHHHHHHHHHHHHH
Confidence 456677899999876654432211 1378999999997653 3567788999999999999
Q ss_pred HhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccc
Q 001548 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (1056)
Q Consensus 344 ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 423 (1056)
|||+.||+|+||||+||+++.++.+|++|||++......
T Consensus 110 ~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~----------------------------------------- 148 (279)
T cd06619 110 YLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS----------------------------------------- 148 (279)
T ss_pred HHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc-----------------------------------------
Confidence 999999999999999999999999999999988654310
Q ss_pred cccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCccc
Q 001548 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (1056)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 503 (1056)
.....+||..|+|||.
T Consensus 149 ----------------------------------------------------------------~~~~~~~~~~y~aPE~ 164 (279)
T cd06619 149 ----------------------------------------------------------------IAKTYVGTNAYMAPER 164 (279)
T ss_pred ----------------------------------------------------------------cccCCCCChhhcCcee
Confidence 0013467888999999
Q ss_pred ccCCCCCccchhHHHHHHHHHHhCCCCcHHHH---------HHHHHhhccCCCCC-CCCCCChhHHHHHHhccccCCCCC
Q 001548 504 LSGGVCTTSSNIYSLGVLFFELFGRFDSERAL---------AAAMSDLRDRILPP-SFLSENPKEAGFCLWQLHPEPLSR 573 (1056)
Q Consensus 504 l~~~~~t~~sDIwSLGvlL~eLlt~f~~~~~~---------~~~~~~~~~~~lp~-~~~~~~~~~~~li~~lL~~dP~~R 573 (1056)
+.+..++.++|||||||++|+|++|..++... ......+.....+. .....++++.+|+.+||+++|.+|
T Consensus 165 ~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 244 (279)
T cd06619 165 ISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKER 244 (279)
T ss_pred ecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhC
Confidence 99988999999999999999999873332111 11111111111111 122457889999999999999999
Q ss_pred CCHHHHhhhhhhhhh
Q 001548 574 PTTREILQSEVTNEF 588 (1056)
Q Consensus 574 pt~~eil~~~~~~~~ 588 (1056)
|++.++++||||...
T Consensus 245 p~~~eil~~~~~~~~ 259 (279)
T cd06619 245 PAPENLMDHPFIVQY 259 (279)
T ss_pred CCHHHHhcCcccccc
Confidence 999999999999765
No 235
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.94 E-value=3.1e-27 Score=270.21 Aligned_cols=250 Identities=14% Similarity=0.105 Sum_probs=190.4
Q ss_pred hHHHhhhccccceeeeCCCCC-ccccccccccccccccc--cCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCC
Q 001548 213 EFFVKTTLKGKGIVCRGPPLN-AFKERRGMIDTKAFVTT--TMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1056)
Q Consensus 213 ~~~~k~~~~g~Gvv~~g~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1056)
-|...-..+-+=+||||-... +.-+.-. +.+.+. +.+-+-.|-...+.++.+++||||+++.+-.....+..
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWn----qvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~- 117 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWN----QVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKT- 117 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHH----HHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCce-
Confidence 344444444556899997621 1111111 111111 12222234445578999999999999877766544422
Q ss_pred CcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcC--cccccCCCCCEEEccC-C
Q 001548 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQG--VTFLDLKPSSFKLLQS-N 366 (1056)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~g--IvHrDLKP~NILl~~~-~ 366 (1056)
-+.+.|.+..|+|+.|+++.++ ++...++.|++|||.||.|||++. |||||||.+||+|+.+ |
T Consensus 118 -------------in~iTEL~TSGtLr~Y~kk~~~-vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G 183 (632)
T KOG0584|consen 118 -------------INFITELFTSGTLREYRKKHRR-VNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLG 183 (632)
T ss_pred -------------eeeeeecccCCcHHHHHHHhcc-CCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcC
Confidence 2347888999999999988765 555589999999999999999996 9999999999999855 9
Q ss_pred cEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccc
Q 001548 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1056)
Q Consensus 367 ~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 446 (1056)
.|||.|+|||.....+
T Consensus 184 ~VKIGDLGLAtl~r~s---------------------------------------------------------------- 199 (632)
T KOG0584|consen 184 EVKIGDLGLATLLRKS---------------------------------------------------------------- 199 (632)
T ss_pred ceeecchhHHHHhhcc----------------------------------------------------------------
Confidence 9999999999875511
Q ss_pred cccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHh
Q 001548 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526 (1056)
Q Consensus 447 ~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLl 526 (1056)
.....+|||.|||||+.. ..|...+||||||+++.||+
T Consensus 200 -----------------------------------------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMv 237 (632)
T KOG0584|consen 200 -----------------------------------------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMV 237 (632)
T ss_pred -----------------------------------------ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHH
Confidence 011579999999999998 68999999999999999999
Q ss_pred CC---CCcHHHHHHHHHhhccCCCCCCCC-CCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001548 527 GR---FDSERALAAAMSDLRDRILPPSFL-SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1056)
Q Consensus 527 t~---f~~~~~~~~~~~~~~~~~lp~~~~-~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~ 588 (1056)
|. |..-.+..+..+.+..++.|..+. -..|+.++||.+||.. .+.|||+.|+|.||||...
T Consensus 238 T~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 238 TSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred hccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 85 555567777888888888886665 4468889999999999 9999999999999999875
No 236
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.94 E-value=5.5e-27 Score=259.45 Aligned_cols=191 Identities=18% Similarity=0.132 Sum_probs=149.0
Q ss_pred CCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcC
Q 001548 270 ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQG 349 (1056)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~g 349 (1056)
.|||++.+......+... ..+|||++|++|.++++..+ .+++.+++.++.||+.||.|||++|
T Consensus 67 ~h~~iv~~~~~~~~~~~~----------------~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~ 129 (267)
T PHA03390 67 DNPNFIKLYYSVTTLKGH----------------VLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKHN 129 (267)
T ss_pred cCCCEEEEEEEEecCCee----------------EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 689988766554322211 24899999999999997765 6788899999999999999999999
Q ss_pred cccccCCCCCEEEccCC-cEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccccccccc
Q 001548 350 VTFLDLKPSSFKLLQSN-QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWS 428 (1056)
Q Consensus 350 IvHrDLKP~NILl~~~~-~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 428 (1056)
|+||||||+||+++.++ .++++|||+++.....
T Consensus 130 i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~---------------------------------------------- 163 (267)
T PHA03390 130 IIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP---------------------------------------------- 163 (267)
T ss_pred eeeCCCCHHHEEEeCCCCeEEEecCccceecCCC----------------------------------------------
Confidence 99999999999999988 9999999987553300
Q ss_pred ccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCC
Q 001548 429 LFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV 508 (1056)
Q Consensus 429 ~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~ 508 (1056)
....++..|+|||++.+..
T Consensus 164 -------------------------------------------------------------~~~~~~~~y~aPE~~~~~~ 182 (267)
T PHA03390 164 -------------------------------------------------------------SCYDGTLDYFSPEKIKGHN 182 (267)
T ss_pred -------------------------------------------------------------ccCCCCCcccChhhhcCCC
Confidence 0234677899999999989
Q ss_pred CCccchhHHHHHHHHHHhCCCCcH---HH----HHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCC-HHHHh
Q 001548 509 CTTSSNIYSLGVLFFELFGRFDSE---RA----LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT-TREIL 580 (1056)
Q Consensus 509 ~t~~sDIwSLGvlL~eLlt~f~~~---~~----~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt-~~eil 580 (1056)
++.++|||||||++|||+++..++ .. ........ ...++.....++.+.+||.+||+++|.+||+ +.++|
T Consensus 183 ~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l 260 (267)
T PHA03390 183 YDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ--QKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEII 260 (267)
T ss_pred CCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh--cccCCcccccCHHHHHHHHHHhccChhhCCchHHHHh
Confidence 999999999999999999863221 11 11111111 1122333467899999999999999999996 59999
Q ss_pred hhhhhh
Q 001548 581 QSEVTN 586 (1056)
Q Consensus 581 ~~~~~~ 586 (1056)
+||||.
T Consensus 261 ~h~~~~ 266 (267)
T PHA03390 261 KHPFLK 266 (267)
T ss_pred cCCccc
Confidence 999996
No 237
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.94 E-value=1e-26 Score=261.20 Aligned_cols=198 Identities=14% Similarity=0.087 Sum_probs=146.1
Q ss_pred hhhccC-CCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC---------------CCCC
Q 001548 264 MMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------------HKGK 327 (1056)
Q Consensus 264 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~---------------~~~~ 327 (1056)
..+... .||||+.+......+... ..+++|+++++|.++|.... ..++
T Consensus 54 ~~l~~l~~hp~iv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~ 117 (297)
T cd05089 54 EVLCKLGHHPNIINLLGACENRGYL----------------YIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLT 117 (297)
T ss_pred HHHHhhcCCCchhheEEEEccCCcc----------------eEEEEecCCCcHHHHHHhccccccccccccccCccCCCC
Confidence 344444 699999866553322111 13889999999999996543 2467
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccc
Q 001548 328 RIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTT 407 (1056)
Q Consensus 328 ~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (1056)
...++.++.||+.||+|||++||+||||||+|||++.++.+|++|||++.......
T Consensus 118 ~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~------------------------ 173 (297)
T cd05089 118 SQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYV------------------------ 173 (297)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCcccccee------------------------
Confidence 77899999999999999999999999999999999999999999999875321000
Q ss_pred cccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccc
Q 001548 408 GIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQST 487 (1056)
Q Consensus 408 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (1056)
.
T Consensus 174 -----------------------------------------------------~-------------------------- 174 (297)
T cd05089 174 -----------------------------------------------------K-------------------------- 174 (297)
T ss_pred -----------------------------------------------------c--------------------------
Confidence 0
Q ss_pred cccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHH
Q 001548 488 SVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCL 563 (1056)
Q Consensus 488 ~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~ 563 (1056)
......+..|+|||.+.+..++.++|||||||++|||++ + |....... ....+.....++.....++.+.+|+.
T Consensus 175 -~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~ 252 (297)
T cd05089 175 -KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE-LYEKLPQGYRMEKPRNCDDEVYELMR 252 (297)
T ss_pred -cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH-HHHHHhcCCCCCCCCCCCHHHHHHHH
Confidence 001112345999999998889999999999999999996 4 43322222 22233333333344456788999999
Q ss_pred hccccCCCCCCCHHHHhhh
Q 001548 564 WQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 564 ~lL~~dP~~Rpt~~eil~~ 582 (1056)
+||..+|.+||++.+|++.
T Consensus 253 ~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 253 QCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred HHcCCChhhCcCHHHHHHH
Confidence 9999999999999999875
No 238
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.94 E-value=8.2e-27 Score=256.62 Aligned_cols=205 Identities=20% Similarity=0.225 Sum_probs=156.8
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....|||++.+......+.. ...+++++.|++|.+++......+++..+..++.||+.||
T Consensus 50 ~~~l~~~~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l 113 (265)
T cd06605 50 LDILHKCNSPYIVGFYGAFYNNGD----------------ISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGL 113 (265)
T ss_pred HHHHHHCCCCchhhhheeeecCCE----------------EEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHH
Confidence 345666779999876555332211 1248899999999999987656678889999999999999
Q ss_pred HHhhh-cCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 343 DYHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 343 ~ylHs-~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
.|||+ .||+|+||||+||+++.++.+|++|||++.......
T Consensus 114 ~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~-------------------------------------- 155 (265)
T cd06605 114 TYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL-------------------------------------- 155 (265)
T ss_pred HHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHH--------------------------------------
Confidence 99999 999999999999999999999999999876543100
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
. ....++..|+||
T Consensus 156 ------------------------------------------------------------------~-~~~~~~~~y~~P 168 (265)
T cd06605 156 ------------------------------------------------------------------A-KTFVGTSSYMAP 168 (265)
T ss_pred ------------------------------------------------------------------h-hcccCChhccCH
Confidence 0 013466779999
Q ss_pred ccccCCCCCccchhHHHHHHHHHHhCC---CCcH----HHHHHHHHhhccCCCCCCCCC-CChhHHHHHHhccccCCCCC
Q 001548 502 EELSGGVCTTSSNIYSLGVLFFELFGR---FDSE----RALAAAMSDLRDRILPPSFLS-ENPKEAGFCLWQLHPEPLSR 573 (1056)
Q Consensus 502 E~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~----~~~~~~~~~~~~~~lp~~~~~-~~~~~~~li~~lL~~dP~~R 573 (1056)
|.+.+..++.++|||||||++|+|+++ |... ......+..+.....+..... .++.+.+||.+||..||.+|
T Consensus 169 E~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 248 (265)
T cd06605 169 ERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRER 248 (265)
T ss_pred HHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhC
Confidence 999999999999999999999999986 3222 122222333322222222222 67889999999999999999
Q ss_pred CCHHHHhhhhhhhhh
Q 001548 574 PTTREILQSEVTNEF 588 (1056)
Q Consensus 574 pt~~eil~~~~~~~~ 588 (1056)
||+.+++.||||+..
T Consensus 249 pt~~~ll~~~~~~~~ 263 (265)
T cd06605 249 PSYKELLEHPFIKKY 263 (265)
T ss_pred cCHHHHhhCchhhcc
Confidence 999999999999753
No 239
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.94 E-value=1.1e-26 Score=260.29 Aligned_cols=253 Identities=16% Similarity=0.143 Sum_probs=169.5
Q ss_pred chhHHHhhhcc--ccceeeeCCCCC-ccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCC
Q 001548 211 FSEFFVKTTLK--GKGIVCRGPPLN-AFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSL 287 (1056)
Q Consensus 211 ~~~~~~k~~~~--g~Gvv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1056)
+.+|-+.+.++ +.|+||++.... +..+.-...... ......... .......+....|||++.+......+...
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~-~~~~~~~~~---~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 79 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKME-KEKEGFPIT---SLREINILLKLQHPNIVTVKEVVVGSNLD 79 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeec-cccccchhh---HHHHHHHHHhcCCCCEEEEEEEEEecCCC
Confidence 34566666555 679999998642 111101111100 001111111 11223466777899999876654432100
Q ss_pred CCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCc
Q 001548 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ 367 (1056)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~ 367 (1056)
. ...+++++.+ +|.+++......++...++.++.||+.||.|||++||+|+||||+||+++.++.
T Consensus 80 -------~-------~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~ 144 (293)
T cd07843 80 -------K-------IYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGI 144 (293)
T ss_pred -------c-------EEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCc
Confidence 1 1137888875 999999776666888899999999999999999999999999999999999999
Q ss_pred EEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCccccccccccc
Q 001548 368 VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDIN 447 (1056)
Q Consensus 368 vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 447 (1056)
+|++|||+++....+.
T Consensus 145 ~~l~d~g~~~~~~~~~---------------------------------------------------------------- 160 (293)
T cd07843 145 LKICDFGLAREYGSPL---------------------------------------------------------------- 160 (293)
T ss_pred EEEeecCceeeccCCc----------------------------------------------------------------
Confidence 9999999887654110
Q ss_pred ccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCC-CCccchhHHHHHHHHHHh
Q 001548 448 EVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV-CTTSSNIYSLGVLFFELF 526 (1056)
Q Consensus 448 d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~-~t~~sDIwSLGvlL~eLl 526 (1056)
.......+++.|+|||.+.+.. ++.++|||||||++|||+
T Consensus 161 ---------------------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~ 201 (293)
T cd07843 161 ---------------------------------------KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELL 201 (293)
T ss_pred ---------------------------------------cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHH
Confidence 0001345678899999987644 689999999999999999
Q ss_pred CCCC---cHHHHHHHHHhhcc----------------------------CCCCCCCCC--CChhHHHHHHhccccCCCCC
Q 001548 527 GRFD---SERALAAAMSDLRD----------------------------RILPPSFLS--ENPKEAGFCLWQLHPEPLSR 573 (1056)
Q Consensus 527 t~f~---~~~~~~~~~~~~~~----------------------------~~lp~~~~~--~~~~~~~li~~lL~~dP~~R 573 (1056)
++.. .............. ..+...+.. .++.+.+|+.+||+.||++|
T Consensus 202 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 281 (293)
T cd07843 202 TKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKR 281 (293)
T ss_pred hCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCcccc
Confidence 8732 22111111110000 001112222 37778899999999999999
Q ss_pred CCHHHHhhhhhh
Q 001548 574 PTTREILQSEVT 585 (1056)
Q Consensus 574 pt~~eil~~~~~ 585 (1056)
||+.|+|+||||
T Consensus 282 ~t~~ell~~~~f 293 (293)
T cd07843 282 ISAEDALKHPYF 293 (293)
T ss_pred CCHHHHhcCCCC
Confidence 999999999997
No 240
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.94 E-value=6.9e-27 Score=256.35 Aligned_cols=236 Identities=18% Similarity=0.150 Sum_probs=164.1
Q ss_pred cccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccc
Q 001548 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1056)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1056)
+|+|+||++...+...+ ..+.........+ .. ......++...|||++.+......+..
T Consensus 15 G~~~~vy~~~~~~~~~~-----a~K~~~~~~~~~~-~~-~~e~~~l~~l~h~~i~~~~~~~~~~~~-------------- 73 (256)
T cd05114 15 GQFGVVHLGKWRAQIKV-----AIKAINEGAMSEE-DF-IEEAKVMMKLSHPKLVQLYGVCTQQKP-------------- 73 (256)
T ss_pred CcCceEEEEEeccCceE-----EEEecccCCccHH-HH-HHHHHHHHHCCCCCceeEEEEEccCCC--------------
Confidence 47899999876433222 1111111111111 11 123456777889999876544221111
Q ss_pred cCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhccc
Q 001548 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1056)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~ 380 (1056)
...+|+|++|++|.+++......++...++.++.||+.||.|||++||+||||||+||+++.++.+|++|||+++...
T Consensus 74 --~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~ 151 (256)
T cd05114 74 --LYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVL 151 (256)
T ss_pred --EEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccC
Confidence 124899999999999997654567788899999999999999999999999999999999999999999999886543
Q ss_pred ccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCccc
Q 001548 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1056)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~ 460 (1056)
....
T Consensus 152 ~~~~---------------------------------------------------------------------------- 155 (256)
T cd05114 152 DDEY---------------------------------------------------------------------------- 155 (256)
T ss_pred CCce----------------------------------------------------------------------------
Confidence 1000
Q ss_pred ccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHH
Q 001548 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALA 536 (1056)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~ 536 (1056)
.......++..|+|||.+.+..++.++|||||||++|||++ + |.......
T Consensus 156 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~ 209 (256)
T cd05114 156 --------------------------TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE 209 (256)
T ss_pred --------------------------eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 00001224456999999998889999999999999999998 4 33332222
Q ss_pred HHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001548 537 AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 537 ~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~ 582 (1056)
... .+.....+......++.+.+|+.+||..+|.+||++.++++.
T Consensus 210 ~~~-~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~ 254 (256)
T cd05114 210 VVE-MISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRA 254 (256)
T ss_pred HHH-HHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 222 222222222233456778999999999999999999999873
No 241
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.94 E-value=9.4e-27 Score=255.64 Aligned_cols=236 Identities=15% Similarity=0.113 Sum_probs=164.5
Q ss_pred cccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccc
Q 001548 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1056)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1056)
+|.|+||+|...+...+ ..+.........+ .-......+....||||+.+......+..
T Consensus 15 G~~~~vy~~~~~~~~~~-----aik~~~~~~~~~~--~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-------------- 73 (256)
T cd05113 15 GQFGVVKYGKWRGQYDV-----AIKMIKEGSMSED--EFIEEAKVMMKLSHEKLVQLYGVCTKQRP-------------- 73 (256)
T ss_pred cccceEEEEEecCCCcE-----EEEEcCCCcccHH--HHHHHHHHHhcCCCCCeeeEEEEEccCCC--------------
Confidence 36799999976432211 1111111111111 11223456777789999976554321111
Q ss_pred cCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhccc
Q 001548 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1056)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~ 380 (1056)
-..+|+|+.|++|.+++......+++..++.++.||+.||.|||+.||+|+||||+||+++.++.+|++|||+++...
T Consensus 74 --~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~ 151 (256)
T cd05113 74 --IYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVL 151 (256)
T ss_pred --cEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecC
Confidence 124899999999999998765567888999999999999999999999999999999999999999999999886543
Q ss_pred ccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCccc
Q 001548 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1056)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~ 460 (1056)
.+..
T Consensus 152 ~~~~---------------------------------------------------------------------------- 155 (256)
T cd05113 152 DDEY---------------------------------------------------------------------------- 155 (256)
T ss_pred CCce----------------------------------------------------------------------------
Confidence 1000
Q ss_pred ccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-CCCc---HHHHH
Q 001548 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDS---ERALA 536 (1056)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~f~~---~~~~~ 536 (1056)
.......++..|+|||.+.+..++.++|||||||++|||++ +..+ ....
T Consensus 156 --------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~- 208 (256)
T cd05113 156 --------------------------TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS- 208 (256)
T ss_pred --------------------------eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-
Confidence 00001234567999999998889999999999999999997 5222 2221
Q ss_pred HHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001548 537 AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 537 ~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~ 582 (1056)
.....+.....++.....++.+.+++.+||+++|.+||++.+|+.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 209 ETVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 2222222322333333457889999999999999999999999875
No 242
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.94 E-value=1.1e-26 Score=256.30 Aligned_cols=208 Identities=17% Similarity=0.122 Sum_probs=151.2
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....|||++.+.......... . -...+++++|++|.+++...+. ++...++.++.||+.||
T Consensus 55 ~~~l~~l~h~~i~~~~~~~~~~~~~-------~-------~~l~~e~~~~~~L~~~l~~~~~-l~~~~~~~~~~qi~~~l 119 (266)
T cd06651 55 IQLLKNLQHERIVQYYGCLRDRAEK-------T-------LTIFMEYMPGGSVKDQLKAYGA-LTESVTRKYTRQILEGM 119 (266)
T ss_pred HHHHHHcCCCCeeeEEEEEEcCCCC-------E-------EEEEEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHH
Confidence 3467778899998755432111000 0 0137889999999999976554 67778899999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+||+++.++.+|++|||+++........
T Consensus 120 ~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~------------------------------------- 162 (266)
T cd06651 120 SYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMS------------------------------------- 162 (266)
T ss_pred HHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccccc-------------------------------------
Confidence 9999999999999999999999999999999988764310000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
........++..|+|||
T Consensus 163 ---------------------------------------------------------------~~~~~~~~~~~~y~aPE 179 (266)
T cd06651 163 ---------------------------------------------------------------GTGIRSVTGTPYWMSPE 179 (266)
T ss_pred ---------------------------------------------------------------CCccccCCccccccCHH
Confidence 00001345788899999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCCCCcH---HHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGRFDSE---RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~f~~~---~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~ei 579 (1056)
.+.+..++.++|||||||++|||++|..++ ...............|......++.+.+|+ +||..+|.+||++.||
T Consensus 180 ~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~ei 258 (266)
T cd06651 180 VISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEEL 258 (266)
T ss_pred HhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHH
Confidence 999988999999999999999999874333 222222222222222222234567777888 6777899999999999
Q ss_pred hhhhhhh
Q 001548 580 LQSEVTN 586 (1056)
Q Consensus 580 l~~~~~~ 586 (1056)
++||||+
T Consensus 259 l~hp~~~ 265 (266)
T cd06651 259 LRHPFAQ 265 (266)
T ss_pred hcCcccc
Confidence 9999985
No 243
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.94 E-value=1.6e-26 Score=253.72 Aligned_cols=201 Identities=12% Similarity=0.046 Sum_probs=151.2
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+......+. ...+|+++.+++|.+++.... .+++..+..++.||+.||
T Consensus 47 ~~~l~~l~h~~i~~~~~~~~~~~-----------------~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al 108 (257)
T cd05116 47 ANVMQQLDNPYIVRMIGICEAES-----------------WMLVMELAELGPLNKFLQKNK-HVTEKNITELVHQVSMGM 108 (257)
T ss_pred HHHHHhCCCCCcceEEEEEcCCC-----------------cEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHH
Confidence 34667779999998765422111 113899999999999997654 567779999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+||+++.++.+|++|||+++........
T Consensus 109 ~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------- 151 (257)
T cd05116 109 KYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY------------------------------------- 151 (257)
T ss_pred HHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCe-------------------------------------
Confidence 9999999999999999999999999999999998765411000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
....+...++..|+|||
T Consensus 152 ---------------------------------------------------------------~~~~~~~~~~~~y~aPE 168 (257)
T cd05116 152 ---------------------------------------------------------------YKAKTHGKWPVKWYAPE 168 (257)
T ss_pred ---------------------------------------------------------------eeecCCCCCCccccCHh
Confidence 00000223456799999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~e 578 (1056)
.+....++.++|||||||++|||++ + |..... ......++....++.....++++.+||.+||++||.+||++.+
T Consensus 169 ~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~ 247 (257)
T cd05116 169 CMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG-NEVTQMIESGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAV 247 (257)
T ss_pred HhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHH
Confidence 9988889999999999999999996 5 333222 2233333443334444567899999999999999999999999
Q ss_pred Hhhh
Q 001548 579 ILQS 582 (1056)
Q Consensus 579 il~~ 582 (1056)
|.+.
T Consensus 248 i~~~ 251 (257)
T cd05116 248 VELR 251 (257)
T ss_pred HHHH
Confidence 8763
No 244
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.94 E-value=1.2e-26 Score=255.65 Aligned_cols=201 Identities=16% Similarity=0.132 Sum_probs=151.4
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~QIl~g 341 (1056)
..+++...|||++.+......+... ...|+|++|++|.+++.... ..++...++.++.||+.|
T Consensus 53 ~~~l~~l~h~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~ 116 (263)
T cd05052 53 AAVMKEIKHPNLVQLLGVCTREPPF----------------YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 116 (263)
T ss_pred HHHHHhCCCCChhheEEEEcCCCCc----------------EEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 4567778999999876553322111 14799999999999997643 457887899999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|.|||++||+||||||+||+++.++.+|++|||+++........
T Consensus 117 l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~------------------------------------ 160 (263)
T cd05052 117 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT------------------------------------ 160 (263)
T ss_pred HHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceee------------------------------------
Confidence 99999999999999999999999999999999998664310000
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
......++..|+||
T Consensus 161 ------------------------------------------------------------------~~~~~~~~~~y~aP 174 (263)
T cd05052 161 ------------------------------------------------------------------AHAGAKFPIKWTAP 174 (263)
T ss_pred ------------------------------------------------------------------ccCCCCCccccCCH
Confidence 00012235569999
Q ss_pred ccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHH
Q 001548 502 EELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTR 577 (1056)
Q Consensus 502 E~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~ 577 (1056)
|.+.+..++.++|||||||++|||++ + |++... ......+.....++.....++.+.+|+.+||..||++||++.
T Consensus 175 E~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ 253 (263)
T cd05052 175 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFA 253 (263)
T ss_pred HHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHH
Confidence 99999899999999999999999997 4 333222 222333333333334456678899999999999999999999
Q ss_pred HHhhh
Q 001548 578 EILQS 582 (1056)
Q Consensus 578 eil~~ 582 (1056)
++++.
T Consensus 254 ~l~~~ 258 (263)
T cd05052 254 EIHQA 258 (263)
T ss_pred HHHHH
Confidence 99874
No 245
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.94 E-value=1.1e-26 Score=260.58 Aligned_cols=210 Identities=15% Similarity=0.168 Sum_probs=155.6
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....|+|++.+......+.. ...+|+++ +++|.+++......+++..++.++.||+.||
T Consensus 53 ~~~l~~~~h~~i~~~~~~~~~~~~----------------~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al 115 (298)
T cd07841 53 IKLLQELKHPNIIGLLDVFGHKSN----------------INLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGL 115 (298)
T ss_pred HHHHhhcCCCCChhhhheeecCCE----------------EEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHH
Confidence 345677789999986665432111 12488899 9999999977654688889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+|+||||+||+++.++.+||+|||+++......
T Consensus 116 ~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~--------------------------------------- 156 (298)
T cd07841 116 EYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN--------------------------------------- 156 (298)
T ss_pred HHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC---------------------------------------
Confidence 99999999999999999999999999999999886654100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......++++|+|||
T Consensus 157 ----------------------------------------------------------------~~~~~~~~~~~y~aPE 172 (298)
T cd07841 157 ----------------------------------------------------------------RKMTHQVVTRWYRAPE 172 (298)
T ss_pred ----------------------------------------------------------------ccccccccceeeeCHH
Confidence 0001234677899999
Q ss_pred cccC-CCCCccchhHHHHHHHHHHhCCCCc---HHHHHHHHHhhccC---------------------CCC-----CCCC
Q 001548 503 ELSG-GVCTTSSNIYSLGVLFFELFGRFDS---ERALAAAMSDLRDR---------------------ILP-----PSFL 552 (1056)
Q Consensus 503 ~l~~-~~~t~~sDIwSLGvlL~eLlt~f~~---~~~~~~~~~~~~~~---------------------~lp-----~~~~ 552 (1056)
.+.+ ..++.++|||||||++|||+++.+. ...........+.. ..+ ..+.
T Consensus 173 ~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (298)
T cd07841 173 LLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFP 252 (298)
T ss_pred HHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcc
Confidence 9865 4578999999999999999987332 22111111111000 000 1123
Q ss_pred CCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhhhc
Q 001548 553 SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (1056)
Q Consensus 553 ~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~~~ 592 (1056)
..+..+.+|+.+||.+||.+|||+.|+++|+||.+...+.
T Consensus 253 ~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~ 292 (298)
T cd07841 253 AASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPT 292 (298)
T ss_pred cccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCC
Confidence 4467788999999999999999999999999999876554
No 246
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.94 E-value=1.2e-26 Score=279.35 Aligned_cols=207 Identities=14% Similarity=0.112 Sum_probs=146.9
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC----CCCCHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG----HKGKRIECLYIFRQI 338 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~----~~~~~~~~~~i~~QI 338 (1056)
..++....||||+.+........... .+++++ +++|.+++.... .......++.|+.||
T Consensus 214 i~il~~l~HpnIv~l~~~~~~~~~~~----------------lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql 276 (501)
T PHA03210 214 ILALGRLNHENILKIEEILRSEANTY----------------MITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQL 276 (501)
T ss_pred HHHHHhCCCCCcCcEeEEEEECCeeE----------------EEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHH
Confidence 45677889999998776644322111 255555 457777774322 122344788999999
Q ss_pred HHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccc
Q 001548 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (1056)
Q Consensus 339 l~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 418 (1056)
+.||+|||++|||||||||+||||+.++.+||+|||+++.+.....
T Consensus 277 ~~aL~yLH~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~---------------------------------- 322 (501)
T PHA03210 277 LCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKERE---------------------------------- 322 (501)
T ss_pred HHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccc----------------------------------
Confidence 9999999999999999999999999999999999999876541000
Q ss_pred ccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCc
Q 001548 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (1056)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 498 (1056)
......+||..|
T Consensus 323 --------------------------------------------------------------------~~~~~~~gt~~y 334 (501)
T PHA03210 323 --------------------------------------------------------------------AFDYGWVGTVAT 334 (501)
T ss_pred --------------------------------------------------------------------cccccccCCcCC
Confidence 000145789999
Q ss_pred cCcccccCCCCCccchhHHHHHHHHHHhCC-CCc--------HHHHHHHHHhhc--cCCCCC------------------
Q 001548 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGR-FDS--------ERALAAAMSDLR--DRILPP------------------ 549 (1056)
Q Consensus 499 ~APE~l~~~~~t~~sDIwSLGvlL~eLlt~-f~~--------~~~~~~~~~~~~--~~~lp~------------------ 549 (1056)
+|||++.+..++.++|||||||+||||+++ +.+ .......+..+. ...+|.
T Consensus 335 ~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~ 414 (501)
T PHA03210 335 NSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAG 414 (501)
T ss_pred CCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCc
Confidence 999999999999999999999999999974 211 111111111111 000110
Q ss_pred -----C--CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001548 550 -----S--FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1056)
Q Consensus 550 -----~--~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~ 588 (1056)
. .....+.+.++|.+||++||.+|||+.|+|.||||...
T Consensus 415 ~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~ 460 (501)
T PHA03210 415 HSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAE 460 (501)
T ss_pred cchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcC
Confidence 0 11244567788999999999999999999999999764
No 247
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.94 E-value=1.6e-26 Score=256.70 Aligned_cols=202 Identities=17% Similarity=0.129 Sum_probs=149.3
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCC---------CCCHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH---------KGKRIECLY 333 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~---------~~~~~~~~~ 333 (1056)
..++....|||++.+......+... ..+|+|+.|++|.+++..... ..+...+..
T Consensus 60 ~~~l~~l~~~~iv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (277)
T cd05062 60 ASVMKEFNCHHVVRLLGVVSQGQPT----------------LVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQ 123 (277)
T ss_pred HHHHHhCCCCCeeeEEEEEcCCCCe----------------EEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHH
Confidence 4567778999999876553221111 138999999999999965332 245567889
Q ss_pred HHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccc
Q 001548 334 IFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (1056)
Q Consensus 334 i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 413 (1056)
++.||+.||.|||+.||+||||||+||+++.++.+|++|||+++........
T Consensus 124 ~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~---------------------------- 175 (277)
T cd05062 124 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY---------------------------- 175 (277)
T ss_pred HHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccCCccee----------------------------
Confidence 9999999999999999999999999999999999999999988664310000
Q ss_pred cccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccc
Q 001548 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (1056)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (1056)
.......
T Consensus 176 -------------------------------------------------------------------------~~~~~~~ 182 (277)
T cd05062 176 -------------------------------------------------------------------------RKGGKGL 182 (277)
T ss_pred -------------------------------------------------------------------------ecCCCCc
Confidence 0000234
Q ss_pred cCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccC
Q 001548 494 EEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPE 569 (1056)
Q Consensus 494 gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~d 569 (1056)
++..|+|||++.+..++.++|||||||++|||++ + |..... ......+.....++.....++.+.+|+.+||+.|
T Consensus 183 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 261 (277)
T cd05062 183 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN-EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYN 261 (277)
T ss_pred cCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCC
Confidence 5677999999999899999999999999999997 3 332222 2222222333333334456778999999999999
Q ss_pred CCCCCCHHHHhhh
Q 001548 570 PLSRPTTREILQS 582 (1056)
Q Consensus 570 P~~Rpt~~eil~~ 582 (1056)
|.+|||+.|++++
T Consensus 262 p~~Rps~~e~l~~ 274 (277)
T cd05062 262 PKMRPSFLEIISS 274 (277)
T ss_pred hhhCcCHHHHHHH
Confidence 9999999999875
No 248
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.94 E-value=1.5e-26 Score=259.94 Aligned_cols=207 Identities=14% Similarity=0.132 Sum_probs=157.3
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...++...|||++.+.+....... ...+++++.|++|.+++... .+++.+++.++.||+.||
T Consensus 67 ~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al 128 (296)
T cd06655 67 ILVMKELKNPNIVNFLDSFLVGDE----------------LFVVMEYLAGGSLTDVVTET--CMDEAQIAAVCRECLQAL 128 (296)
T ss_pred HHHHHhcCCCceeeeeeeEecCce----------------EEEEEEecCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHH
Confidence 456677789999876655321111 12488999999999999654 467889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+|+||||+||+++.++.+||+|||+++......
T Consensus 129 ~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~--------------------------------------- 169 (296)
T cd06655 129 EFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ--------------------------------------- 169 (296)
T ss_pred HHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccccc---------------------------------------
Confidence 99999999999999999999999999999999876543100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......++..|+|||
T Consensus 170 ----------------------------------------------------------------~~~~~~~~~~~y~aPE 185 (296)
T cd06655 170 ----------------------------------------------------------------SKRSTMVGTPYWMAPE 185 (296)
T ss_pred ----------------------------------------------------------------ccCCCcCCCccccCcc
Confidence 0000345788899999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCC-CCCCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRI-LPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~-lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~e 578 (1056)
.+.+..++.++|||||||++|+|+++ |................. ........++.+.+|+.+||..||.+||++.+
T Consensus 186 ~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ 265 (296)
T cd06655 186 VVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKE 265 (296)
T ss_pred hhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHH
Confidence 99988899999999999999999987 333222222222221111 11233456788999999999999999999999
Q ss_pred Hhhhhhhhhhhh
Q 001548 579 ILQSEVTNEFQE 590 (1056)
Q Consensus 579 il~~~~~~~~~~ 590 (1056)
|++||||.....
T Consensus 266 il~~~~~~~~~~ 277 (296)
T cd06655 266 LLQHPFLKLAKP 277 (296)
T ss_pred HhhChHhhhccc
Confidence 999999987543
No 249
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.94 E-value=2.1e-26 Score=253.05 Aligned_cols=205 Identities=18% Similarity=0.161 Sum_probs=149.3
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..+++...|||++.+....... .+.. ...|+|+.+++|.+++...........+..++.||+.||
T Consensus 47 ~~~l~~l~h~~iv~~~~~~~~~--------~~~~-------~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l 111 (262)
T cd05058 47 GIIMKDFSHPNVLSLLGICLPS--------EGSP-------LVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGM 111 (262)
T ss_pred HHHHccCCCCCcceEEEEeecC--------CCCc-------EEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 4467778999999765532211 0111 138899999999999987655667778889999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+|||++.++.+|++|||+++........
T Consensus 112 ~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~------------------------------------- 154 (262)
T cd05058 112 EYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY------------------------------------- 154 (262)
T ss_pred HHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcce-------------------------------------
Confidence 9999999999999999999999999999999998764310000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.........++..|+|||
T Consensus 155 --------------------------------------------------------------~~~~~~~~~~~~~y~aPE 172 (262)
T cd05058 155 --------------------------------------------------------------SVHNHTGAKLPVKWMALE 172 (262)
T ss_pred --------------------------------------------------------------eecccccCcCCccccChh
Confidence 000000233566799999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC-CCc---HHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR-FDS---ERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~-f~~---~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~e 578 (1056)
.+.+..++.++|||||||++|||+++ +.+ ..... ....+.....++.....++.+.+++.+||+++|++||++.+
T Consensus 173 ~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ 251 (262)
T cd05058 173 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFD-ITVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSE 251 (262)
T ss_pred HhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHH-HHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHH
Confidence 99888899999999999999999983 322 22222 22222222222222344677899999999999999999999
Q ss_pred Hhhh
Q 001548 579 ILQS 582 (1056)
Q Consensus 579 il~~ 582 (1056)
|+..
T Consensus 252 il~~ 255 (262)
T cd05058 252 LVSR 255 (262)
T ss_pred HHHH
Confidence 9874
No 250
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.94 E-value=1.6e-26 Score=252.95 Aligned_cols=202 Identities=19% Similarity=0.187 Sum_probs=155.7
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..+++...|||++.+......+.. ...+++|++|++|.+++...+ .++...+..++.||+.||
T Consensus 53 ~~~l~~~~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l 115 (258)
T cd06632 53 IALLSKLQHPNIVQYLGTEREEDN----------------LYIFLELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGL 115 (258)
T ss_pred HHHHHhcCCCCchheeeeEecCCe----------------EEEEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHH
Confidence 456777889999876654321111 124889999999999997654 467778999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+|+||||+||+++.++.+||+|||++.......
T Consensus 116 ~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~--------------------------------------- 156 (258)
T cd06632 116 EYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS--------------------------------------- 156 (258)
T ss_pred HHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc---------------------------------------
Confidence 99999999999999999999999999999999876643100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
......|+..|+|||
T Consensus 157 -----------------------------------------------------------------~~~~~~~~~~y~~pe 171 (258)
T cd06632 157 -----------------------------------------------------------------FAKSFKGSPYWMAPE 171 (258)
T ss_pred -----------------------------------------------------------------cccccCCCcceeCHH
Confidence 001345788899999
Q ss_pred cccCCC-CCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001548 503 ELSGGV-CTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1056)
Q Consensus 503 ~l~~~~-~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~e 578 (1056)
.+.... ++.++|+|||||++|+|+++ |..................+......++.+.+|+.+||+.+|.+||++.+
T Consensus 172 ~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 251 (258)
T cd06632 172 VIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAE 251 (258)
T ss_pred HhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHH
Confidence 988766 89999999999999999986 33333333333333323344444456788999999999999999999999
Q ss_pred Hhhhhhh
Q 001548 579 ILQSEVT 585 (1056)
Q Consensus 579 il~~~~~ 585 (1056)
++.|||+
T Consensus 252 ~l~~~~~ 258 (258)
T cd06632 252 LLEHPFV 258 (258)
T ss_pred HhcCCCC
Confidence 9999996
No 251
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.94 E-value=2.4e-26 Score=254.02 Aligned_cols=208 Identities=13% Similarity=0.034 Sum_probs=150.9
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhc-----CCCCCHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-----GHKGKRIECLYIFRQ 337 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-----~~~~~~~~~~~i~~Q 337 (1056)
...+....|||++.+........... .... ....|+|+.+++|.+++... ...++...++.++.|
T Consensus 51 ~~~l~~l~h~~iv~~~~~~~~~~~~~---~~~~-------~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (272)
T cd05075 51 AVCMKEFDHPNVMRLIGVCLQTVESE---GYPS-------PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTD 120 (272)
T ss_pred HHHHHhCCCCCcceEEEEEccCCccc---CCCC-------cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHH
Confidence 34566778999998765432211111 0001 12378999999999988432 234677789999999
Q ss_pred HHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccc
Q 001548 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (1056)
Q Consensus 338 Il~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 417 (1056)
|+.||+|||++||+||||||+|||++.++.+|++|||+++.+......
T Consensus 121 i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------- 168 (272)
T cd05075 121 IASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYY-------------------------------- 168 (272)
T ss_pred HHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcccccCcccce--------------------------------
Confidence 999999999999999999999999999999999999998765410000
Q ss_pred cccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCC
Q 001548 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (1056)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 497 (1056)
..-....+++.
T Consensus 169 ---------------------------------------------------------------------~~~~~~~~~~~ 179 (272)
T cd05075 169 ---------------------------------------------------------------------RQGRIAKMPVK 179 (272)
T ss_pred ---------------------------------------------------------------------ecCCcccCCcc
Confidence 00002234566
Q ss_pred ccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCC
Q 001548 498 YASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (1056)
Q Consensus 498 Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~R 573 (1056)
|+|||.+.+..++.++|||||||++|||++ + |..... ......+.....++.....+..+.+++.+||++||.+|
T Consensus 180 ~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 258 (272)
T cd05075 180 WIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN-SEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDR 258 (272)
T ss_pred cCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccC
Confidence 999999999889999999999999999997 3 333222 22333344433333444567789999999999999999
Q ss_pred CCHHHHhhh
Q 001548 574 PTTREILQS 582 (1056)
Q Consensus 574 pt~~eil~~ 582 (1056)
||+.+|++.
T Consensus 259 ps~~~l~~~ 267 (272)
T cd05075 259 PSFETLRCE 267 (272)
T ss_pred cCHHHHHHH
Confidence 999999874
No 252
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.94 E-value=1.7e-26 Score=257.87 Aligned_cols=207 Identities=18% Similarity=0.234 Sum_probs=157.9
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..+++...|||++.+......... ...+++|+.|++|.+++.. ..++..+++.++.||+.||
T Consensus 67 ~~~l~~~~h~~vv~~~~~~~~~~~----------------~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l 128 (285)
T cd06648 67 VVIMRDYQHPNIVEMYSSYLVGDE----------------LWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKAL 128 (285)
T ss_pred HHHHHHcCCCChheEEEEEEcCCe----------------EEEEEeccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHH
Confidence 346777789999986664332111 1248899999999999977 3567778999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+||+++.++.++++|||++.......
T Consensus 129 ~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~--------------------------------------- 169 (285)
T cd06648 129 SFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV--------------------------------------- 169 (285)
T ss_pred HHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCC---------------------------------------
Confidence 99999999999999999999999999999999875533100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......|++.|+|||
T Consensus 170 ----------------------------------------------------------------~~~~~~~~~~~y~aPE 185 (285)
T cd06648 170 ----------------------------------------------------------------PRRKSLVGTPYWMAPE 185 (285)
T ss_pred ----------------------------------------------------------------cccccccCCccccCHH
Confidence 0001345788999999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCC--CCCCCCChhHHHHHHhccccCCCCCCCHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILP--PSFLSENPKEAGFCLWQLHPEPLSRPTTR 577 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp--~~~~~~~~~~~~li~~lL~~dP~~Rpt~~ 577 (1056)
.+.+..++.++|||||||++|||+++ |..... ...+..++....+ ......++.+.+|+.+||+++|.+||++.
T Consensus 186 ~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~ 264 (285)
T cd06648 186 VISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP-LQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAA 264 (285)
T ss_pred HhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH-HHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHH
Confidence 99998899999999999999999986 333222 2222333332211 12223678899999999999999999999
Q ss_pred HHhhhhhhhhhhhh
Q 001548 578 EILQSEVTNEFQEV 591 (1056)
Q Consensus 578 eil~~~~~~~~~~~ 591 (1056)
++++||||...+++
T Consensus 265 ~il~~~~~~~~~~~ 278 (285)
T cd06648 265 ELLNHPFLAKAGPP 278 (285)
T ss_pred HHccCcccccCCCc
Confidence 99999999886543
No 253
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.94 E-value=7.6e-27 Score=261.42 Aligned_cols=207 Identities=17% Similarity=0.203 Sum_probs=147.8
Q ss_pred hhccC-CCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHH
Q 001548 265 MVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG----HKGKRIECLYIFRQIV 339 (1056)
Q Consensus 265 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~----~~~~~~~~~~i~~QIl 339 (1056)
.+... .|||++.+......+.... . +.. ..+|+|++| +|.+++.... ..+++..++.++.||+
T Consensus 53 ~l~~l~~~~~i~~~~~~~~~~~~~~----~--~~~-----~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~ 120 (295)
T cd07837 53 LLQMLSESIYIVRLLDVEHVEEKNG----K--PSL-----YLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLL 120 (295)
T ss_pred HHHHccCCCCccceeeeEeecCCCC----C--ceE-----EEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHH
Confidence 44444 5699987765544332210 0 001 138888886 8999885532 3468889999999999
Q ss_pred HHHHHhhhcCcccccCCCCCEEEcc-CCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccc
Q 001548 340 ALVDYHHTQGVTFLDLKPSSFKLLQ-SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (1056)
Q Consensus 340 ~gL~ylHs~gIvHrDLKP~NILl~~-~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 418 (1056)
.||.|||++||+||||||+||+++. ++.+|++|||+++....+
T Consensus 121 ~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~------------------------------------ 164 (295)
T cd07837 121 KGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIP------------------------------------ 164 (295)
T ss_pred HHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccceecCCC------------------------------------
Confidence 9999999999999999999999998 889999999988654310
Q ss_pred ccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCc
Q 001548 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (1056)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 498 (1056)
....+...++++|
T Consensus 165 -------------------------------------------------------------------~~~~~~~~~~~~~ 177 (295)
T cd07837 165 -------------------------------------------------------------------VKSYTHEIVTLWY 177 (295)
T ss_pred -------------------------------------------------------------------ccccCCcccccCC
Confidence 0000123567889
Q ss_pred cCcccccC-CCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhcc---C------------------CCC-----
Q 001548 499 ASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRD---R------------------ILP----- 548 (1056)
Q Consensus 499 ~APE~l~~-~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~---~------------------~lp----- 548 (1056)
+|||.+.+ ..++.++|||||||++|+|+++ |.+............. . ...
T Consensus 178 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (295)
T cd07837 178 RAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLS 257 (295)
T ss_pred CChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHH
Confidence 99998876 4579999999999999999986 3333222222221110 0 000
Q ss_pred CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhh
Q 001548 549 PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (1056)
Q Consensus 549 ~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~ 586 (1056)
...+..++.+.+||.+||++||.+||++.|++.||||+
T Consensus 258 ~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 258 RAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred HhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 01134677889999999999999999999999999984
No 254
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.94 E-value=8.9e-27 Score=261.90 Aligned_cols=209 Identities=15% Similarity=0.117 Sum_probs=157.6
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..+++...|||++.+.+....+.. ...+|+|++|++|.+++... .++...+..++.|++.||
T Consensus 67 ~~~l~~~~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L 128 (297)
T cd06656 67 ILVMRENKNPNIVNYLDSYLVGDE----------------LWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQAL 128 (297)
T ss_pred HHHHHhCCCCCEeeEEEEEecCCE----------------EEEeecccCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHH
Confidence 346777899999886655332111 12489999999999999653 467778999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||+.||+||||||+||+++.++.++++|||++.......
T Consensus 129 ~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~--------------------------------------- 169 (297)
T cd06656 129 DFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--------------------------------------- 169 (297)
T ss_pred HHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc---------------------------------------
Confidence 99999999999999999999999999999999886533100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......+++.|+|||
T Consensus 170 ----------------------------------------------------------------~~~~~~~~~~~y~aPE 185 (297)
T cd06656 170 ----------------------------------------------------------------SKRSTMVGTPYWMAPE 185 (297)
T ss_pred ----------------------------------------------------------------cCcCcccCCccccCHH
Confidence 0001345788899999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCCCC---cHHHHHHHHHhhccCCCC-CCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGRFD---SERALAAAMSDLRDRILP-PSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~f~---~~~~~~~~~~~~~~~~lp-~~~~~~~~~~~~li~~lL~~dP~~Rpt~~e 578 (1056)
.+.+..++.++|||||||++|+|+++.. .................+ ......++.+.+|+.+||+++|.+||++.+
T Consensus 186 ~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ 265 (297)
T cd06656 186 VVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKE 265 (297)
T ss_pred HHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHH
Confidence 9999889999999999999999998733 322222222222222111 223345677889999999999999999999
Q ss_pred Hhhhhhhhhhhhhc
Q 001548 579 ILQSEVTNEFQEVC 592 (1056)
Q Consensus 579 il~~~~~~~~~~~~ 592 (1056)
+++||||...+...
T Consensus 266 il~~~~~~~~~~~~ 279 (297)
T cd06656 266 LLQHPFLKLAKPLS 279 (297)
T ss_pred HhcCchhccccccc
Confidence 99999998765443
No 255
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=4.1e-25 Score=223.13 Aligned_cols=282 Identities=15% Similarity=0.175 Sum_probs=229.3
Q ss_pred cccccccccccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCC
Q 001548 722 DNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSK 801 (1056)
Q Consensus 722 ~~~~l~gh~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg 801 (1056)
..++|..|.+.|.+++|+ ..++..|++..|.++|+|+.-++.++.+ +.+|...|..++.+.|...|++||.|+
T Consensus 9 r~~~l~~~qgaV~avryN--~dGnY~ltcGsdrtvrLWNp~rg~likt-----YsghG~EVlD~~~s~Dnskf~s~GgDk 81 (307)
T KOG0316|consen 9 RLSILDCAQGAVRAVRYN--VDGNYCLTCGSDRTVRLWNPLRGALIKT-----YSGHGHEVLDAALSSDNSKFASCGGDK 81 (307)
T ss_pred hceeecccccceEEEEEc--cCCCEEEEcCCCceEEeecccccceeee-----ecCCCceeeeccccccccccccCCCCc
Confidence 456788899999999984 3566678999999999999766654443 559999999999999999999999999
Q ss_pred cEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCC--ceEEEEecCCCcEEEEEE
Q 001548 802 KIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTG--QTVSHYIEHEKRAWSVDF 879 (1056)
Q Consensus 802 ~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~--~~v~~~~~H~~~V~sv~f 879 (1056)
.|.+||+++ ......+.+|.+.|+.+.||.. ...++||+.|.++++||-++. ++++.+....+.|.+|+.
T Consensus 82 ~v~vwDV~T-------Gkv~Rr~rgH~aqVNtV~fNee-sSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v 153 (307)
T KOG0316|consen 82 AVQVWDVNT-------GKVDRRFRGHLAQVNTVRFNEE-SSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDV 153 (307)
T ss_pred eEEEEEccc-------CeeeeecccccceeeEEEecCc-ceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEe
Confidence 999999986 3444566789999999999987 889999999999999998764 689999888999999998
Q ss_pred ecCCCCEEEEEeCCCcEEEEECCCCceeEEEeCCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCC
Q 001548 880 SQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKA 959 (1056)
Q Consensus 880 sp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~ 959 (1056)
+. ..|++||.||+++.||+|.|+....+ ...+|+|++|+++++ ..++++.|+++++.|-.+++. +...+||.+.
T Consensus 154 ~~---heIvaGS~DGtvRtydiR~G~l~sDy-~g~pit~vs~s~d~n-c~La~~l~stlrLlDk~tGkl-L~sYkGhkn~ 227 (307)
T KOG0316|consen 154 AE---HEIVAGSVDGTVRTYDIRKGTLSSDY-FGHPITSVSFSKDGN-CSLASSLDSTLRLLDKETGKL-LKSYKGHKNM 227 (307)
T ss_pred cc---cEEEeeccCCcEEEEEeecceeehhh-cCCcceeEEecCCCC-EEEEeeccceeeecccchhHH-HHHhcccccc
Confidence 64 67999999999999999998765333 456899999999998 566699999999999988876 6788999887
Q ss_pred eEEEEE--c-CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCc-EEEEEecCCcceeeEEeeCCCCEEEEE
Q 001548 960 VSYVKF--L-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNE-KVGICRLEHNLFPFTIFNLSDCWLLLV 1035 (1056)
Q Consensus 960 V~~l~f--s-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~-Vv~ls~~~~~~~~~~~~s~~g~~l~s~ 1035 (1056)
-..+.- + ...++++||.||.|.+||+. ....+..+.-|... |.+++ ++|.-..++++
T Consensus 228 eykldc~l~qsdthV~sgSEDG~Vy~wdLv--------d~~~~sk~~~~~~v~v~dl~-----------~hp~~~~f~~A 288 (307)
T KOG0316|consen 228 EYKLDCCLNQSDTHVFSGSEDGKVYFWDLV--------DETQISKLSVVSTVIVTDLS-----------CHPTMDDFITA 288 (307)
T ss_pred eeeeeeeecccceeEEeccCCceEEEEEec--------cceeeeeeccCCceeEEeee-----------cccCccceeEe
Confidence 665544 3 55679999999999999998 34566677766666 46666 45555555554
Q ss_pred EcCCcEEEE
Q 001548 1036 CFDFTTLSF 1044 (1056)
Q Consensus 1036 s~D~~v~iW 1044 (1056)
.+..+.+|
T Consensus 289 -~~~~~~~~ 296 (307)
T KOG0316|consen 289 -TGHGDLFW 296 (307)
T ss_pred -cCCceece
Confidence 33444455
No 256
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.94 E-value=1.7e-26 Score=259.59 Aligned_cols=249 Identities=18% Similarity=0.182 Sum_probs=173.5
Q ss_pred HHHhhhccccceeeeCCCC-CccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcC
Q 001548 214 FFVKTTLKGKGIVCRGPPL-NAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGAR 292 (1056)
Q Consensus 214 ~~~k~~~~g~Gvv~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (1056)
-+.+...+|+|+||++... ++..+.-..... ........-......+....|||++.+......+..
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~------~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~------ 92 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDL------RKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEE------ 92 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEe------cccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCe------
Confidence 3446667788999998642 111111111110 000111111122345677789998876554332111
Q ss_pred CCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeC
Q 001548 293 TGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIG 372 (1056)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~D 372 (1056)
...++++++|++|..++... .+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|
T Consensus 93 ----------~~iv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~d 160 (297)
T cd06659 93 ----------LWVLMEFLQGGALTDIVSQT--RLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSD 160 (297)
T ss_pred ----------EEEEEecCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEee
Confidence 12489999999999988653 467889999999999999999999999999999999999999999999
Q ss_pred cchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCC
Q 001548 373 PIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIP 452 (1056)
Q Consensus 373 fgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~ 452 (1056)
||+++......
T Consensus 161 fg~~~~~~~~~--------------------------------------------------------------------- 171 (297)
T cd06659 161 FGFCAQISKDV--------------------------------------------------------------------- 171 (297)
T ss_pred chhHhhccccc---------------------------------------------------------------------
Confidence 99886543100
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCCCCcH
Q 001548 453 HSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSE 532 (1056)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~f~~~ 532 (1056)
.......|+..|+|||++.+..++.++|||||||++|||+++..++
T Consensus 172 ----------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~ 217 (297)
T cd06659 172 ----------------------------------PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPY 217 (297)
T ss_pred ----------------------------------ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 0001346788999999999888999999999999999999873332
Q ss_pred ---HHHHHHHHhhccCC--CCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhh
Q 001548 533 ---RALAAAMSDLRDRI--LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1056)
Q Consensus 533 ---~~~~~~~~~~~~~~--lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~ 590 (1056)
... ..+..+.... ........++.+.+|+.+||+.+|.+||++.++++||||.....
T Consensus 218 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~ 279 (297)
T cd06659 218 FSDSPV-QAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGL 279 (297)
T ss_pred CCCCHH-HHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCC
Confidence 221 1222222221 12223355778899999999999999999999999999987643
No 257
>PTZ00421 coronin; Provisional
Probab=99.94 E-value=3e-24 Score=254.44 Aligned_cols=212 Identities=17% Similarity=0.213 Sum_probs=173.2
Q ss_pred ecCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001548 775 FNNSANVICSISFDR-DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1056)
Q Consensus 775 l~~h~~~V~sv~fsp-dg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V 853 (1056)
+.+|.+.|.+++|+| ++++||+|+.|++|+|||+.+...............+|...|.+++|+|...++|++|+.|++|
T Consensus 71 l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtV 150 (493)
T PTZ00421 71 LLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVV 150 (493)
T ss_pred EeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEE
Confidence 568999999999999 8899999999999999999752110001112234568999999999999856799999999999
Q ss_pred EEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEeCC-C-CeEEEEEccCCCcEEEE
Q 001548 854 KLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNI-A-NVCCVQFSAHSSHLLAF 931 (1056)
Q Consensus 854 ~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~~~-~-~V~sv~fsp~~~~~las 931 (1056)
+|||+.+++.+..+.+|...|++++|+| ++.+|++|+.|++|+|||+++++.+.++..+ + .+..+.|.+++..++++
T Consensus 151 rIWDl~tg~~~~~l~~h~~~V~sla~sp-dG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~ 229 (493)
T PTZ00421 151 NVWDVERGKAVEVIKCHSDQITSLEWNL-DGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITL 229 (493)
T ss_pred EEEECCCCeEEEEEcCCCCceEEEEEEC-CCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEE
Confidence 9999999999999999999999999999 9999999999999999999999988887633 3 35577899988755555
Q ss_pred E---eCCCeEEEEEcCCCCcceEEecCCC-CCeEEEEEc-CCCEEEEEE-CCCeEEEEECCC
Q 001548 932 G---SADYRTYCYDLRNARAPWCVLAGHE-KAVSYVKFL-DSGTLVTAS-TDNKLKLWDLKR 987 (1056)
Q Consensus 932 G---s~Dg~V~lwDlr~~~~~~~~l~gH~-~~V~~l~fs-~~~~L~SgS-~Dg~IkiWdl~~ 987 (1056)
| +.|+.|++||+++...++.....+. ..+....|+ ++++|++|+ .|+.|++||+..
T Consensus 230 G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~ 291 (493)
T PTZ00421 230 GCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMN 291 (493)
T ss_pred ecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeC
Confidence 5 3589999999998877766655444 445556676 667788877 599999999984
No 258
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.94 E-value=1.4e-26 Score=270.73 Aligned_cols=155 Identities=15% Similarity=0.199 Sum_probs=118.6
Q ss_pred CCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccc
Q 001548 326 GKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMF 405 (1056)
Q Consensus 326 ~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (1056)
++...+..++.||+.||.|||++||+||||||+|||++.++.+|++|||+++.......
T Consensus 234 l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~--------------------- 292 (400)
T cd05105 234 LTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSN--------------------- 292 (400)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceecccccc---------------------
Confidence 55667889999999999999999999999999999999999999999999876431000
Q ss_pred cccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccc
Q 001548 406 TTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQ 485 (1056)
Q Consensus 406 ~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (1056)
T Consensus 293 -------------------------------------------------------------------------------- 292 (400)
T cd05105 293 -------------------------------------------------------------------------------- 292 (400)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHH
Q 001548 486 STSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGF 561 (1056)
Q Consensus 486 ~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~l 561 (1056)
........++..|+|||.+.+..++.++|||||||+||||++ + |............+.....++.....++.+.++
T Consensus 293 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 372 (400)
T cd05105 293 YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDI 372 (400)
T ss_pred ccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHH
Confidence 000002346677999999999899999999999999999985 3 332222222333344433333444567788999
Q ss_pred HHhccccCCCCCCCHHHHhh
Q 001548 562 CLWQLHPEPLSRPTTREILQ 581 (1056)
Q Consensus 562 i~~lL~~dP~~Rpt~~eil~ 581 (1056)
+.+||+.||.+||++.+|.+
T Consensus 373 i~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 373 MVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred HHHHCccCHhHCcCHHHHHH
Confidence 99999999999999998876
No 259
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.94 E-value=2.1e-26 Score=251.79 Aligned_cols=244 Identities=16% Similarity=0.134 Sum_probs=169.6
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCccc
Q 001548 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1056)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1056)
.+|.|+||++........ ......+.............-......+....|++++.+......+..
T Consensus 5 ~g~~g~v~~~~~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~------------- 70 (262)
T cd00192 5 EGAFGEVYKGKLKGKDGK-TTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEP------------- 70 (262)
T ss_pred cCCceEEEEEEEecCCCC-CceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCc-------------
Confidence 367899999987532100 011111111111111111111222345666679999876655332111
Q ss_pred ccCCCcccccCCCCCHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEe
Q 001548 300 WIGGLRQGSSDHGVNLREWLNAR--------GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1056)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~--------~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~ 371 (1056)
-..+|++++|++|.+++... +..+++..+..++.||+.||.|||++||+|+||||+||+++.++.+|++
T Consensus 71 ---~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~ 147 (262)
T cd00192 71 ---LYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKIS 147 (262)
T ss_pred ---eEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEc
Confidence 12489999999999999876 4678888999999999999999999999999999999999999999999
Q ss_pred CcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCC
Q 001548 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1056)
Q Consensus 372 Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~ 451 (1056)
|||.++.......
T Consensus 148 dfg~~~~~~~~~~------------------------------------------------------------------- 160 (262)
T cd00192 148 DFGLSRDVYDDDY------------------------------------------------------------------- 160 (262)
T ss_pred ccccccccccccc-------------------------------------------------------------------
Confidence 9998876541100
Q ss_pred CCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C--
Q 001548 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R-- 528 (1056)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~-- 528 (1056)
........++..|+|||.+.+..++.++|||||||++|||++ +
T Consensus 161 ----------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~ 206 (262)
T cd00192 161 ----------------------------------YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGAT 206 (262)
T ss_pred ----------------------------------cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCC
Confidence 000013446778999999998889999999999999999997 3
Q ss_pred -CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001548 529 -FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 529 -f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~ 582 (1056)
|.... .......+.....++.....++.+.+++.+||+.||.+||++.+++++
T Consensus 207 p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 207 PYPGLS-NEEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred CCCCCC-HHHHHHHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 33322 222233333333334445668899999999999999999999999875
No 260
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.94 E-value=1.5e-26 Score=253.75 Aligned_cols=205 Identities=20% Similarity=0.180 Sum_probs=157.8
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR---GHKGKRIECLYIFRQIV 339 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~---~~~~~~~~~~~i~~QIl 339 (1056)
...+....|||++.+.......... . ....+++++|++|.+++... ...+++..++.++.||+
T Consensus 50 ~~~l~~l~~~~i~~~~~~~~~~~~~-------~-------~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~ 115 (265)
T cd08217 50 VNILRELKHPNIVRYYDRIIDRSNQ-------T-------LYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLL 115 (265)
T ss_pred HHHHHhcCCCccceeeeeeecCCCC-------E-------EEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHH
Confidence 4567788899998765432211100 0 12488999999999999653 45678889999999999
Q ss_pred HHHHHhh-----hcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccc
Q 001548 340 ALVDYHH-----TQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (1056)
Q Consensus 340 ~gL~ylH-----s~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 414 (1056)
.||+||| +.+|+|+||||+||+++.++.+|++|||++.......
T Consensus 116 ~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~------------------------------- 164 (265)
T cd08217 116 LALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDS------------------------------- 164 (265)
T ss_pred HHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCc-------------------------------
Confidence 9999999 9999999999999999999999999999887644100
Q ss_pred ccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCcccccccccccccccccc
Q 001548 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (1056)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 494 (1056)
.......+
T Consensus 165 ------------------------------------------------------------------------~~~~~~~~ 172 (265)
T cd08217 165 ------------------------------------------------------------------------SFAKTYVG 172 (265)
T ss_pred ------------------------------------------------------------------------cccccccc
Confidence 00013467
Q ss_pred CCCccCcccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCC
Q 001548 495 EKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPL 571 (1056)
Q Consensus 495 t~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~ 571 (1056)
++.|+|||.+.+..++.++|+|||||++|+|+++ |.... .......+.....++.....++.+.+|+.+||..+|.
T Consensus 173 ~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~ 251 (265)
T cd08217 173 TPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN-QLQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPD 251 (265)
T ss_pred CCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC-HHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcc
Confidence 8889999999998899999999999999999986 33222 2233334444444444446678899999999999999
Q ss_pred CCCCHHHHhhhhhh
Q 001548 572 SRPTTREILQSEVT 585 (1056)
Q Consensus 572 ~Rpt~~eil~~~~~ 585 (1056)
+||++.+|++|||+
T Consensus 252 ~Rp~~~~il~~~~~ 265 (265)
T cd08217 252 KRPSTEELLQLPLI 265 (265)
T ss_pred cCCCHHHHhhCCCC
Confidence 99999999999995
No 261
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.94 E-value=2.4e-26 Score=259.10 Aligned_cols=201 Identities=15% Similarity=0.034 Sum_probs=151.2
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....|||++.+........ ...+++++.+|+|.+++......++...+..++.||+.||
T Consensus 60 ~~~~~~l~h~niv~~~~~~~~~~-----------------~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L 122 (303)
T cd05110 60 ALIMASMDHPHLVRLLGVCLSPT-----------------IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGM 122 (303)
T ss_pred HHHHHhCCCCCcccEEEEEcCCC-----------------ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence 45677789999998665432111 1137889999999999987766678878999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+||+++.++.+|++|||+++........
T Consensus 123 ~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~------------------------------------- 165 (303)
T cd05110 123 MYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE------------------------------------- 165 (303)
T ss_pred HHHhhcCeeccccccceeeecCCCceEEccccccccccCcccc-------------------------------------
Confidence 9999999999999999999999999999999998764310000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......++..|+|||
T Consensus 166 ----------------------------------------------------------------~~~~~~~~~~~y~~PE 181 (303)
T cd05110 166 ----------------------------------------------------------------YNADGGKMPIKWMALE 181 (303)
T ss_pred ----------------------------------------------------------------cccCCCccccccCCHH
Confidence 0000233566799999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~e 578 (1056)
.+.+..++.++|||||||++|||++ + |.... .......+.....++.....+..+.+++..||..+|.+||++.+
T Consensus 182 ~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~ 260 (303)
T cd05110 182 CIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP-TREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKE 260 (303)
T ss_pred HhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 9999899999999999999999986 3 32221 11122222233333334456788999999999999999999999
Q ss_pred Hhhh
Q 001548 579 ILQS 582 (1056)
Q Consensus 579 il~~ 582 (1056)
+++.
T Consensus 261 l~~~ 264 (303)
T cd05110 261 LAAE 264 (303)
T ss_pred HHHH
Confidence 9885
No 262
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.94 E-value=7e-27 Score=253.78 Aligned_cols=192 Identities=17% Similarity=0.141 Sum_probs=145.4
Q ss_pred cCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhh
Q 001548 268 SNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT 347 (1056)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs 347 (1056)
...||||+.+......... -...|||++|++|.+++.... .+++..+..++.||+.||+|||+
T Consensus 41 ~~~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~ 103 (237)
T cd05576 41 PHCVPNMVCLHKYIVSEDS----------------VFLVLQHAEGGKLWSHISKFL-NIPEECVKRWAAEMVVALDALHR 103 (237)
T ss_pred hcCCCceeehhhheecCCe----------------EEEEEecCCCCCHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHh
Confidence 3468898875554321111 124899999999999997654 47788999999999999999999
Q ss_pred cCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccc
Q 001548 348 QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWW 427 (1056)
Q Consensus 348 ~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 427 (1056)
+||+||||||+||+++.++.++++|||++......
T Consensus 104 ~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~--------------------------------------------- 138 (237)
T cd05576 104 EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS--------------------------------------------- 138 (237)
T ss_pred CCeeccCCCHHHEEEcCCCCEEEecccchhccccc---------------------------------------------
Confidence 99999999999999999999999999977553310
Q ss_pred cccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCC
Q 001548 428 SLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG 507 (1056)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~ 507 (1056)
.....++..|+|||.+.+.
T Consensus 139 -------------------------------------------------------------~~~~~~~~~y~aPE~~~~~ 157 (237)
T cd05576 139 -------------------------------------------------------------CDGEAVENMYCAPEVGGIS 157 (237)
T ss_pred -------------------------------------------------------------cccCCcCccccCCcccCCC
Confidence 0022345679999999888
Q ss_pred CCCccchhHHHHHHHHHHhCCCCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCH-----HHHhhh
Q 001548 508 VCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT-----REILQS 582 (1056)
Q Consensus 508 ~~t~~sDIwSLGvlL~eLlt~f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~-----~eil~~ 582 (1056)
.++.++||||+||++|||++|..................+| ...++.+++||.+||++||++||++ .+++.|
T Consensus 158 ~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 234 (237)
T cd05576 158 EETEACDWWSLGAILFELLTGKTLVECHPSGINTHTTLNIP---EWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSH 234 (237)
T ss_pred CCCchhhHHHHHHHHHHHHHCcchhhcCchhcccccccCCc---ccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcC
Confidence 89999999999999999999854322111111100111122 2357889999999999999999996 999999
Q ss_pred hhh
Q 001548 583 EVT 585 (1056)
Q Consensus 583 ~~~ 585 (1056)
|||
T Consensus 235 ~~~ 237 (237)
T cd05576 235 PFF 237 (237)
T ss_pred CCC
Confidence 997
No 263
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.94 E-value=2.9e-26 Score=251.81 Aligned_cols=244 Identities=15% Similarity=0.100 Sum_probs=169.9
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCC
Q 001548 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1056)
Q Consensus 213 ~~~~k~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1056)
+|.+.+.++ |.|.||++...++..+ ..+.... ........-......++...|||++.+.........
T Consensus 7 ~y~~~~~ig~g~~~~vy~~~~~~~~~~-----~~k~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~---- 76 (261)
T cd05148 7 EFTLERKLGSGYFGEVWEGLWKNRVRV-----AIKILKS-DDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEP---- 76 (261)
T ss_pred HHHHhhhhccCCCccEEEeEecCCCcE-----EEEeccc-cchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCC----
Confidence 566666555 7899999987542222 1111111 111111111222346777789999876544321111
Q ss_pred cCCCCCcccccCCCcccccCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEE
Q 001548 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNA-RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1056)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~-~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vk 369 (1056)
...+|+|++|++|.+++.. .+..++...++.++.||+.||.|||++||+|+||||+||+++.++.+|
T Consensus 77 ------------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~k 144 (261)
T cd05148 77 ------------VYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCK 144 (261)
T ss_pred ------------eEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEE
Confidence 1248999999999999966 344578889999999999999999999999999999999999999999
Q ss_pred EeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCccccccccccccc
Q 001548 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1056)
Q Consensus 370 l~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~ 449 (1056)
++|||++........
T Consensus 145 l~d~g~~~~~~~~~~----------------------------------------------------------------- 159 (261)
T cd05148 145 VADFGLARLIKEDVY----------------------------------------------------------------- 159 (261)
T ss_pred EccccchhhcCCccc-----------------------------------------------------------------
Confidence 999998866431000
Q ss_pred CCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C
Q 001548 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R 528 (1056)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~ 528 (1056)
......++..|+|||.+.+..++.++|||||||++|+|++ +
T Consensus 160 --------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g 201 (261)
T cd05148 160 --------------------------------------LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYG 201 (261)
T ss_pred --------------------------------------cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCC
Confidence 0001224556999999998889999999999999999997 4
Q ss_pred ---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001548 529 ---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 529 ---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~ 582 (1056)
|...... .....+.....++.....++.+.+++.+||..||.+|||+.++++.
T Consensus 202 ~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~ 257 (261)
T cd05148 202 QVPYPGMNNH-EVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREE 257 (261)
T ss_pred CCCCCcCCHH-HHHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 3332222 2222222333344455778889999999999999999999999863
No 264
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.94 E-value=1e-26 Score=258.80 Aligned_cols=204 Identities=17% Similarity=0.167 Sum_probs=150.8
Q ss_pred hhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Q 001548 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (1056)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ 343 (1056)
.++....||+++.+......+. .. ..+|||+.|++|.+++...+ .+++..++.++.|++.||.
T Consensus 49 ~~~~~~~~~~i~~~~~~~~~~~-----------~~-----~~v~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~ 111 (278)
T cd05606 49 SLVSTGDCPFIVCMSYAFHTPD-----------KL-----SFILDLMNGGDLHYHLSQHG-VFSEAEMRFYAAEIILGLE 111 (278)
T ss_pred HHHHhCCCCcEeeeeeeeecCC-----------EE-----EEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHH
Confidence 3455567888876444322111 11 13899999999999997654 5777799999999999999
Q ss_pred HhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccc
Q 001548 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (1056)
Q Consensus 344 ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 423 (1056)
|||++||+||||||+||+++.++.+|++|||+++......
T Consensus 112 ~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~---------------------------------------- 151 (278)
T cd05606 112 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---------------------------------------- 151 (278)
T ss_pred HHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC----------------------------------------
Confidence 9999999999999999999999999999999876533100
Q ss_pred cccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCccc
Q 001548 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (1056)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 503 (1056)
.....|+..|+|||.
T Consensus 152 -----------------------------------------------------------------~~~~~~~~~y~aPE~ 166 (278)
T cd05606 152 -----------------------------------------------------------------PHASVGTHGYMAPEV 166 (278)
T ss_pred -----------------------------------------------------------------CcCcCCCcCCcCcHH
Confidence 002357888999999
Q ss_pred ccCC-CCCccchhHHHHHHHHHHhCCCCcHHHH----HHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCC----
Q 001548 504 LSGG-VCTTSSNIYSLGVLFFELFGRFDSERAL----AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP---- 574 (1056)
Q Consensus 504 l~~~-~~t~~sDIwSLGvlL~eLlt~f~~~~~~----~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rp---- 574 (1056)
+.++ .++.++||||+||++|||+++..++... ............++.....++.+.+++.+||..+|.+||
T Consensus 167 ~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~ 246 (278)
T cd05606 167 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLG 246 (278)
T ss_pred hcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCC
Confidence 9754 6899999999999999999873222110 011111111111222224578899999999999999999
Q ss_pred -CHHHHhhhhhhhhhh
Q 001548 575 -TTREILQSEVTNEFQ 589 (1056)
Q Consensus 575 -t~~eil~~~~~~~~~ 589 (1056)
++.++++||||....
T Consensus 247 ~~~~~ll~~~~~~~~~ 262 (278)
T cd05606 247 RGAQEVKEHPFFRSLD 262 (278)
T ss_pred CCHHHHHhCccccCCC
Confidence 999999999998753
No 265
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.94 E-value=1.8e-26 Score=260.61 Aligned_cols=212 Identities=18% Similarity=0.207 Sum_probs=154.5
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....|+|++.+.......... . ...+|+++++ +|.+++......+++..++.++.||+.||
T Consensus 57 ~~~l~~l~h~~i~~~~~~~~~~~~~---------~-----~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l 121 (309)
T cd07845 57 ITLLLNLRHPNIVELKEVVVGKHLD---------S-----IFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGL 121 (309)
T ss_pred HHHHHhCCCCCCcceEEEEecCCCC---------e-----EEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence 4567778999999866553311100 0 1137888875 89999977656678889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 122 ~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~--------------------------------------- 162 (309)
T cd07845 122 QYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA--------------------------------------- 162 (309)
T ss_pred HHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCcc---------------------------------------
Confidence 99999999999999999999999999999999886644100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
...+...++++|+|||
T Consensus 163 ----------------------------------------------------------------~~~~~~~~~~~y~aPE 178 (309)
T cd07845 163 ----------------------------------------------------------------KPMTPKVVTLWYRAPE 178 (309)
T ss_pred ----------------------------------------------------------------CCCCcccccccccChh
Confidence 0001234577899999
Q ss_pred cccC-CCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhc--cC------------------CCCC--------C
Q 001548 503 ELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLR--DR------------------ILPP--------S 550 (1056)
Q Consensus 503 ~l~~-~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~--~~------------------~lp~--------~ 550 (1056)
.+.+ ..++.++|||||||++|||+++ |.............. .. .++. .
T Consensus 179 ~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (309)
T cd07845 179 LLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHK 258 (309)
T ss_pred hhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHh
Confidence 9876 5579999999999999999987 332222222111111 00 0000 0
Q ss_pred CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhhhc
Q 001548 551 FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (1056)
Q Consensus 551 ~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~~~ 592 (1056)
+...++.+.+||.+||++||.+|||+.++++||||.....+.
T Consensus 259 ~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~~ 300 (309)
T cd07845 259 FPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLPC 300 (309)
T ss_pred ccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCCC
Confidence 122467788999999999999999999999999998765554
No 266
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.94 E-value=3.2e-26 Score=252.91 Aligned_cols=208 Identities=14% Similarity=0.069 Sum_probs=152.8
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhc-----CCCCCHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-----GHKGKRIECLYIFRQ 337 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-----~~~~~~~~~~~i~~Q 337 (1056)
...++...|||++.+........... .... ...+++|+++++|.+++... ...++...++.++.|
T Consensus 52 ~~~l~~l~h~~iv~~~~~~~~~~~~~---~~~~-------~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 121 (273)
T cd05035 52 AACMKDFDHPNVMKLIGVCFEASSLQ---KIPK-------PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVD 121 (273)
T ss_pred HHHHHhCCCCCeeeEEeeeccCCccc---cCcc-------cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHH
Confidence 45677788999998665533222211 0111 22478999999999998442 135777789999999
Q ss_pred HHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccc
Q 001548 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (1056)
Q Consensus 338 Il~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 417 (1056)
|+.||.|||++||+||||||+||+++.++.+|++|||+++........
T Consensus 122 i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-------------------------------- 169 (273)
T cd05035 122 IALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYY-------------------------------- 169 (273)
T ss_pred HHHHHHHHHhCCeeccccchheEEECCCCeEEECCccceeeccccccc--------------------------------
Confidence 999999999999999999999999999999999999998765411000
Q ss_pred cccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCC
Q 001548 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (1056)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 497 (1056)
. ......++..
T Consensus 170 -------------------------------------------~--------------------------~~~~~~~~~~ 180 (273)
T cd05035 170 -------------------------------------------R--------------------------QGRIAKMPVK 180 (273)
T ss_pred -------------------------------------------c--------------------------ccccccCCcc
Confidence 0 0001223456
Q ss_pred ccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCC
Q 001548 498 YASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (1056)
Q Consensus 498 Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~R 573 (1056)
|+|||.+.+..++.++|||||||++|||++ + |...... .....+.....++.....++.+.+++.+||..||.+|
T Consensus 181 ~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 259 (273)
T cd05035 181 WIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH-EIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDR 259 (273)
T ss_pred ccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhC
Confidence 999999988889999999999999999997 4 3333222 2333333344444455678889999999999999999
Q ss_pred CCHHHHhhh
Q 001548 574 PTTREILQS 582 (1056)
Q Consensus 574 pt~~eil~~ 582 (1056)
|++.+++++
T Consensus 260 p~~~e~~~~ 268 (273)
T cd05035 260 PTFTKLREV 268 (273)
T ss_pred cCHHHHHHH
Confidence 999999875
No 267
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=2.4e-27 Score=249.85 Aligned_cols=242 Identities=16% Similarity=0.189 Sum_probs=175.0
Q ss_pred ccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCccccc
Q 001548 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWI 301 (1056)
Q Consensus 222 g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (1056)
||.+.||-+..+.+++-..-...+.. ...+.+--....+++...+||-...++-..+.+. ..|
T Consensus 182 GKVIL~rEKat~k~YAiKIlkKevii----akdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~d-----------rlC-- 244 (516)
T KOG0690|consen 182 GKVILCREKATGKLYAIKILKKEVII----AKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQD-----------RLC-- 244 (516)
T ss_pred ceEEEEeecccCceeehhhhhhhhee----ehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCc-----------eEE--
Confidence 67788888887777761100000000 0011111222234566668887655444333222 233
Q ss_pred CCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccc
Q 001548 302 GGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLE 381 (1056)
Q Consensus 302 ~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~ 381 (1056)
.+|+|..||.|+-.|.. .+.+++..++.+-..|+.||.|||+++||.||||.+|+|++.+|++||+|||||++-..
T Consensus 245 ---FVMeyanGGeLf~HLsr-er~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~ 320 (516)
T KOG0690|consen 245 ---FVMEYANGGELFFHLSR-ERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK 320 (516)
T ss_pred ---EEEEEccCceEeeehhh-hhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhccc
Confidence 38999999999988855 45677779999999999999999999999999999999999999999999999987431
Q ss_pred cccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccc
Q 001548 382 SASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEH 461 (1056)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~ 461 (1056)
. |
T Consensus 321 ~-------------------------------------------------------------------g----------- 322 (516)
T KOG0690|consen 321 Y-------------------------------------------------------------------G----------- 322 (516)
T ss_pred c-------------------------------------------------------------------c-----------
Confidence 0 0
Q ss_pred cccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHH
Q 001548 462 HTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAA 538 (1056)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~ 538 (1056)
....+.||||.|.|||++....|+.++|+|.+||++|||+|| |...++....
T Consensus 323 -------------------------~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLF 377 (516)
T KOG0690|consen 323 -------------------------DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLF 377 (516)
T ss_pred -------------------------ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHH
Confidence 012278999999999999999999999999999999999996 5554444433
Q ss_pred HHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCC-----CHHHHhhhhhhhhhh
Q 001548 539 MSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP-----TTREILQSEVTNEFQ 589 (1056)
Q Consensus 539 ~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rp-----t~~eil~~~~~~~~~ 589 (1056)
.-++......|. ..+|+.+.|+..+|.+||.+|. .+.||.+|+||....
T Consensus 378 eLIl~ed~kFPr--~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~ 431 (516)
T KOG0690|consen 378 ELILMEDLKFPR--TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVD 431 (516)
T ss_pred HHHHhhhccCCc--cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCC
Confidence 333333322222 3489999999999999999996 468999999998753
No 268
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.94 E-value=1.5e-26 Score=257.59 Aligned_cols=203 Identities=17% Similarity=0.208 Sum_probs=149.9
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~QIl~g 341 (1056)
...+....|||++.+......+.. ...+|+|+. ++|..++... +..++...++.++.||+.|
T Consensus 50 ~~~l~~l~h~~i~~~~~~~~~~~~----------------~~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~ 112 (284)
T cd07860 50 ISLLKELNHPNIVKLLDVIHTENK----------------LYLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQG 112 (284)
T ss_pred HHHHHhcCCCCCcchhhhcccCCc----------------EEEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 457778899999987665332111 123788886 5899988653 3457888999999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|+|||++||+|+||||+||+++.++.+|++|||+++......
T Consensus 113 l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~-------------------------------------- 154 (284)
T cd07860 113 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-------------------------------------- 154 (284)
T ss_pred HHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc--------------------------------------
Confidence 999999999999999999999999999999999886543100
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
.......++.+|+||
T Consensus 155 -----------------------------------------------------------------~~~~~~~~~~~y~aP 169 (284)
T cd07860 155 -----------------------------------------------------------------RTYTHEVVTLWYRAP 169 (284)
T ss_pred -----------------------------------------------------------------cccccccccccccCC
Confidence 001133567889999
Q ss_pred ccccCCC-CCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCC-------------------C--------CC
Q 001548 502 EELSGGV-CTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRIL-------------------P--------PS 550 (1056)
Q Consensus 502 E~l~~~~-~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~l-------------------p--------~~ 550 (1056)
|.+.+.. ++.++|||||||++|||+++ |............++.... + ..
T Consensus 170 E~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (284)
T cd07860 170 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKV 249 (284)
T ss_pred eEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHH
Confidence 9987744 68999999999999999986 4333222222211111000 0 11
Q ss_pred CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 551 FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 551 ~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
....++.+.+||.+||+.||++|||+.+++.||||
T Consensus 250 ~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 250 VPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred cccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 22456788899999999999999999999999997
No 269
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.94 E-value=2.7e-26 Score=251.75 Aligned_cols=201 Identities=16% Similarity=0.143 Sum_probs=150.1
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....|||++.+......... -..+|++++|++|.+++......+++..++.++.||+.||
T Consensus 50 ~~~l~~l~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l 113 (256)
T cd05059 50 AKVMMKLSHPNLVQLYGVCTKQRP----------------IFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAM 113 (256)
T ss_pred HHHHHhCCCCCEEEEEEEEcCCCc----------------eEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence 456777889998875443221111 1138999999999999987655778889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+||+++.++.+|++|||+++........
T Consensus 114 ~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~------------------------------------- 156 (256)
T cd05059 114 EYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT------------------------------------- 156 (256)
T ss_pred HHHHHCCcccccccHhhEEECCCCcEEECCcccceeccccccc-------------------------------------
Confidence 9999999999999999999999999999999988654310000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
......++..|+|||
T Consensus 157 -----------------------------------------------------------------~~~~~~~~~~y~~Pe 171 (256)
T cd05059 157 -----------------------------------------------------------------SSQGTKFPVKWAPPE 171 (256)
T ss_pred -----------------------------------------------------------------ccCCCCCCccccCHH
Confidence 000112345699999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~e 578 (1056)
.+.+..++.++|||||||++|||++ + |....... ....+.....++.....++.+.+++.+||+.+|.+|||+.+
T Consensus 172 ~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~ 250 (256)
T cd05059 172 VFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE-VVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKK 250 (256)
T ss_pred HhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH-HHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHH
Confidence 9999899999999999999999997 4 32222222 22223323223334456888999999999999999999999
Q ss_pred Hhhh
Q 001548 579 ILQS 582 (1056)
Q Consensus 579 il~~ 582 (1056)
+++.
T Consensus 251 ~l~~ 254 (256)
T cd05059 251 LLSQ 254 (256)
T ss_pred HHHH
Confidence 9875
No 270
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.94 E-value=2.8e-26 Score=256.45 Aligned_cols=207 Identities=17% Similarity=0.146 Sum_probs=151.5
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC---------CCCCHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------HKGKRIECLY 333 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~---------~~~~~~~~~~ 333 (1056)
...+....|||++.+......+.. . ..+|+|+.|++|.++++..+ .......++.
T Consensus 60 ~~~l~~l~~~~i~~~~~~~~~~~~---------~-------~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 123 (288)
T cd05061 60 ASVMKGFTCHHVVRLLGVVSKGQP---------T-------LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 123 (288)
T ss_pred HHHHHhCCCCCeeeEEEEEcCCCC---------c-------EEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHH
Confidence 346777789998876554221111 1 13899999999999996532 2334557889
Q ss_pred HHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccc
Q 001548 334 IFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (1056)
Q Consensus 334 i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 413 (1056)
++.||+.||.|||++||+||||||+||+++.++.+|++|||+++........
T Consensus 124 ~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~---------------------------- 175 (288)
T cd05061 124 MAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY---------------------------- 175 (288)
T ss_pred HHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCccccccccccc----------------------------
Confidence 9999999999999999999999999999999999999999988764310000
Q ss_pred cccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccc
Q 001548 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (1056)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (1056)
.......
T Consensus 176 -------------------------------------------------------------------------~~~~~~~ 182 (288)
T cd05061 176 -------------------------------------------------------------------------RKGGKGL 182 (288)
T ss_pred -------------------------------------------------------------------------cccCCCc
Confidence 0000223
Q ss_pred cCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccC
Q 001548 494 EEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPE 569 (1056)
Q Consensus 494 gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~d 569 (1056)
++..|+|||.+.+..++.++|||||||++|||++ + |..... ......+.....++.....++.+.+++.+||++|
T Consensus 183 ~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 261 (288)
T cd05061 183 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFN 261 (288)
T ss_pred ccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence 4567999999998899999999999999999996 2 332211 1222333333333334455788999999999999
Q ss_pred CCCCCCHHHHhh------hhhhhh
Q 001548 570 PLSRPTTREILQ------SEVTNE 587 (1056)
Q Consensus 570 P~~Rpt~~eil~------~~~~~~ 587 (1056)
|.+|||+.++++ ||+|..
T Consensus 262 p~~Rps~~~ll~~l~~~~~~~~~~ 285 (288)
T cd05061 262 PKMRPTFLEIVNLLKDDLHPSFPE 285 (288)
T ss_pred hhHCcCHHHHHHHHHhhcCCCCCC
Confidence 999999999987 666654
No 271
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.94 E-value=1.8e-26 Score=256.16 Aligned_cols=205 Identities=16% Similarity=0.153 Sum_probs=154.7
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....|||++.+......+.. ...++||++|++|.+++... .+.+..++.++.||+.||
T Consensus 53 ~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~i~~~l 114 (277)
T cd06642 53 ITVLSQCDSPYITRYYGSYLKGTK----------------LWIIMEYLGGGSALDLLKPG--PLEETYIATILREILKGL 114 (277)
T ss_pred HHHHHcCCCCccHhhhcccccCCc----------------eEEEEEccCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHH
Confidence 456777889999976554322111 22489999999999998643 567778999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+|+||||+||+++.++.++++|||+++......
T Consensus 115 ~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--------------------------------------- 155 (277)
T cd06642 115 DYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--------------------------------------- 155 (277)
T ss_pred HHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcc---------------------------------------
Confidence 99999999999999999999999999999999886543100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......|+..|+|||
T Consensus 156 ----------------------------------------------------------------~~~~~~~~~~~y~aPE 171 (277)
T cd06642 156 ----------------------------------------------------------------IKRNTFVGTPFWMAPE 171 (277)
T ss_pred ----------------------------------------------------------------hhhhcccCcccccCHH
Confidence 0000235778899999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCCCCcHHHH--HHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHh
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREIL 580 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~f~~~~~~--~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil 580 (1056)
.+.+..++.++|+|||||++|||++|..+.... ......+.....+......+..+.+|+.+||+.+|.+||++.+++
T Consensus 172 ~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il 251 (277)
T cd06642 172 VIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELL 251 (277)
T ss_pred HhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHH
Confidence 999988999999999999999999874332211 111111222222222234567788999999999999999999999
Q ss_pred hhhhhhhh
Q 001548 581 QSEVTNEF 588 (1056)
Q Consensus 581 ~~~~~~~~ 588 (1056)
+||||...
T Consensus 252 ~~~~~~~~ 259 (277)
T cd06642 252 KHKFITRY 259 (277)
T ss_pred HhHHHHHH
Confidence 99998764
No 272
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.94 E-value=1.2e-26 Score=259.47 Aligned_cols=203 Identities=17% Similarity=0.246 Sum_probs=148.4
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++...+||||+.+......+... ..+|+|+.+ +|.+++......++...++.++.||+.||
T Consensus 54 ~~~l~~l~h~~i~~~~~~~~~~~~~----------------~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al 116 (291)
T cd07844 54 ASLLKDLKHANIVTLHDIIHTKKTL----------------TLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGL 116 (291)
T ss_pred HHHHhhCCCcceeeEEEEEecCCeE----------------EEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 5567778999999876654322111 137888885 99999977666778889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+||+++.++.+|++|||+++....+.
T Consensus 117 ~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~--------------------------------------- 157 (291)
T cd07844 117 AYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPS--------------------------------------- 157 (291)
T ss_pred HHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCC---------------------------------------
Confidence 99999999999999999999999999999999876432000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......++..|+|||
T Consensus 158 ----------------------------------------------------------------~~~~~~~~~~~~~aPE 173 (291)
T cd07844 158 ----------------------------------------------------------------KTYSNEVVTLWYRPPD 173 (291)
T ss_pred ----------------------------------------------------------------ccccccccccccCCcH
Confidence 0000234567899999
Q ss_pred cccC-CCCCccchhHHHHHHHHHHhCC---CCcHH-H---HHHHHHhhccC--------------------CC-----CC
Q 001548 503 ELSG-GVCTTSSNIYSLGVLFFELFGR---FDSER-A---LAAAMSDLRDR--------------------IL-----PP 549 (1056)
Q Consensus 503 ~l~~-~~~t~~sDIwSLGvlL~eLlt~---f~~~~-~---~~~~~~~~~~~--------------------~l-----p~ 549 (1056)
++.+ ..++.++|||||||++|+|+++ |.... . .......+... .. ..
T Consensus 174 ~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (291)
T cd07844 174 VLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLIN 253 (291)
T ss_pred HhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHH
Confidence 9876 4589999999999999999987 32222 1 11111111000 00 00
Q ss_pred CCCCCC--hhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 550 SFLSEN--PKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 550 ~~~~~~--~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
...... +.+.+|+.+||+++|.+|||+.++++||||
T Consensus 254 ~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 254 HAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred hCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 111233 677899999999999999999999999997
No 273
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.94 E-value=1.9e-26 Score=256.10 Aligned_cols=204 Identities=16% Similarity=0.153 Sum_probs=156.4
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....|||++.+......+... ..+||+++|++|.+++... .+++..+..++.|++.||
T Consensus 53 ~~~l~~l~h~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~i~~~--~l~~~~~~~~~~~l~~~l 114 (277)
T cd06640 53 ITVLSQCDSPYVTKYYGSYLKGTKL----------------WIIMEYLGGGSALDLLRAG--PFDEFQIATMLKEILKGL 114 (277)
T ss_pred HHHHHhCCCCCEeeEEEEEEECCEE----------------EEEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHH
Confidence 4567777899999877764433222 2489999999999999653 467778999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
+|||+.||+|+||+|+||+++.++.++++|||++.......
T Consensus 115 ~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~--------------------------------------- 155 (277)
T cd06640 115 DYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--------------------------------------- 155 (277)
T ss_pred HHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc---------------------------------------
Confidence 99999999999999999999999999999999886543100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......++..|+|||
T Consensus 156 ----------------------------------------------------------------~~~~~~~~~~~y~apE 171 (277)
T cd06640 156 ----------------------------------------------------------------IKRNTFVGTPFWMAPE 171 (277)
T ss_pred ----------------------------------------------------------------cccccccCcccccCHh
Confidence 0000235778899999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCCCCcH---HHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGRFDSE---RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~f~~~---~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~ei 579 (1056)
.+.+..++.++|+|||||++|||++|..++ ...... ..+.....+......++.+.+|+.+||+.+|.+||++.++
T Consensus 172 ~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i 250 (277)
T cd06640 172 VIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL-FLIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKEL 250 (277)
T ss_pred HhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHh-hhhhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHH
Confidence 999888999999999999999999873332 111111 1122222233333456778899999999999999999999
Q ss_pred hhhhhhhhh
Q 001548 580 LQSEVTNEF 588 (1056)
Q Consensus 580 l~~~~~~~~ 588 (1056)
++|+||...
T Consensus 251 l~~~~~~~~ 259 (277)
T cd06640 251 LKHKFIVKN 259 (277)
T ss_pred HhChHhhhc
Confidence 999999764
No 274
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.94 E-value=2.9e-26 Score=255.52 Aligned_cols=207 Identities=14% Similarity=0.135 Sum_probs=148.7
Q ss_pred hhhccC-CCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHH
Q 001548 264 MMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIV 339 (1056)
Q Consensus 264 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~QIl 339 (1056)
.++... .|||++.+........... ... ...+|+|++|++|.+++.. .+..+++..+..++.||+
T Consensus 66 ~~l~~l~~h~~i~~~~~~~~~~~~~~----~~~-------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~ 134 (286)
T cd06638 66 NILKALSDHPNVVKFYGMYYKKDVKN----GDQ-------LWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEAL 134 (286)
T ss_pred HHHHHHhcCCCeeeeeeeeeecccCC----CCe-------EEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHH
Confidence 345555 6999997655422111010 000 1248999999999998853 234577778999999999
Q ss_pred HHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccc
Q 001548 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (1056)
Q Consensus 340 ~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 419 (1056)
.||.|||+++|+||||||+||+++.++.+|++|||+++......
T Consensus 135 ~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~------------------------------------ 178 (286)
T cd06638 135 MGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR------------------------------------ 178 (286)
T ss_pred HHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCceeecccCC------------------------------------
Confidence 99999999999999999999999999999999999886543100
Q ss_pred cccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCcc
Q 001548 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (1056)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 499 (1056)
.......|++.|+
T Consensus 179 -------------------------------------------------------------------~~~~~~~~~~~y~ 191 (286)
T cd06638 179 -------------------------------------------------------------------LRRNTSVGTPFWM 191 (286)
T ss_pred -------------------------------------------------------------------CccccccCCCccc
Confidence 0001345788899
Q ss_pred CcccccC-----CCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCC--CCCCCChhHHHHHHhccccC
Q 001548 500 SPEELSG-----GVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPP--SFLSENPKEAGFCLWQLHPE 569 (1056)
Q Consensus 500 APE~l~~-----~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~--~~~~~~~~~~~li~~lL~~d 569 (1056)
|||++.. ..++.++|||||||++|||+++ |............... ..+. .....+..+.+|+.+||+.|
T Consensus 192 aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~ 270 (286)
T cd06638 192 APEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN-PPPTLHQPELWSNEFNDFIRKCLTKD 270 (286)
T ss_pred ChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc-CCCcccCCCCcCHHHHHHHHHHccCC
Confidence 9999853 4578999999999999999986 3322222222222111 1111 11224567899999999999
Q ss_pred CCCCCCHHHHhhhhhh
Q 001548 570 PLSRPTTREILQSEVT 585 (1056)
Q Consensus 570 P~~Rpt~~eil~~~~~ 585 (1056)
|.+|||+.||++|+||
T Consensus 271 p~~Rps~~ell~~~~~ 286 (286)
T cd06638 271 YEKRPTVSDLLQHVFI 286 (286)
T ss_pred cccCCCHHHHhhcccC
Confidence 9999999999999997
No 275
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.94 E-value=2.3e-26 Score=254.39 Aligned_cols=205 Identities=18% Similarity=0.169 Sum_probs=152.6
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....|||++.+......... ...+||++.|++|.+++...+ .++...++.++.||+.||
T Consensus 59 ~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l 121 (272)
T cd06629 59 IETLKDLDHLNIVQYLGFETTEEY----------------LSIFLEYVPGGSIGSCLRTYG-RFEEQLVRFFTEQVLEGL 121 (272)
T ss_pred HHHHHhcCCCCcceEEEEeccCCc----------------eEEEEecCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHH
Confidence 456777889999876544221111 123789999999999997764 567778999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++|++|+||||+||+++.++.++++|||+++.......
T Consensus 122 ~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~-------------------------------------- 163 (272)
T cd06629 122 AYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYD-------------------------------------- 163 (272)
T ss_pred HHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccccccc--------------------------------------
Confidence 999999999999999999999999999999998865331000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
........|+..|+|||
T Consensus 164 ---------------------------------------------------------------~~~~~~~~~~~~y~~PE 180 (272)
T cd06629 164 ---------------------------------------------------------------NDQNMSMQGSVFWMAPE 180 (272)
T ss_pred ---------------------------------------------------------------ccccccccCCccccCHH
Confidence 00001345778899999
Q ss_pred cccCCC--CCccchhHHHHHHHHHHhCCCCcH---HHHHHHHHhhcc---CCCCCC-CCCCChhHHHHHHhccccCCCCC
Q 001548 503 ELSGGV--CTTSSNIYSLGVLFFELFGRFDSE---RALAAAMSDLRD---RILPPS-FLSENPKEAGFCLWQLHPEPLSR 573 (1056)
Q Consensus 503 ~l~~~~--~t~~sDIwSLGvlL~eLlt~f~~~---~~~~~~~~~~~~---~~lp~~-~~~~~~~~~~li~~lL~~dP~~R 573 (1056)
.+.... ++.++|+|||||++|||+++..+. ............ ..+++. ....+..+.+|+.+||+++|..|
T Consensus 181 ~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 260 (272)
T cd06629 181 VIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNR 260 (272)
T ss_pred HhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhC
Confidence 988754 789999999999999999873332 222222221111 122222 23457789999999999999999
Q ss_pred CCHHHHhhhhhh
Q 001548 574 PTTREILQSEVT 585 (1056)
Q Consensus 574 pt~~eil~~~~~ 585 (1056)
|++.++|+||||
T Consensus 261 ps~~~il~~~~~ 272 (272)
T cd06629 261 PTARELLQHPFI 272 (272)
T ss_pred CCHHHHhhCCCC
Confidence 999999999996
No 276
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.94 E-value=1.8e-26 Score=254.45 Aligned_cols=208 Identities=17% Similarity=0.105 Sum_probs=152.5
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....|||++.+........ ... . ..+|++++|++|.+++...+. ++...++.++.||+.||
T Consensus 55 ~~~l~~l~h~~i~~~~~~~~~~~-------~~~--~-----~~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~l~~~l 119 (265)
T cd06652 55 IQLLKNLLHERIVQYYGCLRDPM-------ERT--L-----SIFMEHMPGGSIKDQLKSYGA-LTENVTRKYTRQILEGV 119 (265)
T ss_pred HHHHHhcCCCCeeeEEeEeccCC-------Cce--E-----EEEEEecCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHH
Confidence 34677778999987554321100 000 0 137899999999999976643 56778999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+|+||||+||+++.++.+||+|||+++.......
T Consensus 120 ~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~-------------------------------------- 161 (265)
T cd06652 120 SYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICL-------------------------------------- 161 (265)
T ss_pred HHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccc--------------------------------------
Confidence 999999999999999999999999999999998875431000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.........|+..|+|||
T Consensus 162 --------------------------------------------------------------~~~~~~~~~~~~~y~aPE 179 (265)
T cd06652 162 --------------------------------------------------------------SGTGMKSVTGTPYWMSPE 179 (265)
T ss_pred --------------------------------------------------------------cccccccCCCCccccChh
Confidence 000011345788899999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCCCCc---HHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGRFDS---ERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~f~~---~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~ei 579 (1056)
++.+..++.++|||||||++|||++|..+ ................+......+..+.+++.+||. +|.+||++++|
T Consensus 180 ~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~i 258 (265)
T cd06652 180 VISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADEL 258 (265)
T ss_pred hhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHH
Confidence 99988899999999999999999986333 222323322222222233333456778899999995 99999999999
Q ss_pred hhhhhhh
Q 001548 580 LQSEVTN 586 (1056)
Q Consensus 580 l~~~~~~ 586 (1056)
++|||+.
T Consensus 259 l~~~~~~ 265 (265)
T cd06652 259 LRHTFVH 265 (265)
T ss_pred hcCcccC
Confidence 9999974
No 277
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.94 E-value=5.8e-27 Score=248.39 Aligned_cols=206 Identities=15% Similarity=0.161 Sum_probs=154.3
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
-.++....|+||+++...--....+.. . ..-..+||++ ..+|...+.. .++-..+..|+.|++.|+
T Consensus 66 l~l~~~v~~~nii~l~n~ftP~~~l~~--~--------~e~y~v~e~m-~~nl~~vi~~---elDH~tis~i~yq~~~~i 131 (369)
T KOG0665|consen 66 LKLMKCVNHKNIISLLNVFTPQKTLEE--F--------QEVYLVMELM-DANLCQVILM---ELDHETISYILYQMLCGI 131 (369)
T ss_pred hhhhhhhcccceeeeeeccCccccHHH--H--------HhHHHHHHhh-hhHHHHHHHH---hcchHHHHHHHHHHHHHH
Confidence 346777899999975554322222210 1 1111245544 4578877752 366668999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|+|+.||+||||||+||++..++.+||.|||+++.-.
T Consensus 132 k~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~------------------------------------------ 169 (369)
T KOG0665|consen 132 KHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTED------------------------------------------ 169 (369)
T ss_pred HHHHhcceeecccCcccceecchhheeeccchhhcccC------------------------------------------
Confidence 99999999999999999999999999999999986632
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
+...+|..+.|..|+|||
T Consensus 170 --------------------------------------------------------------~~~~mtpyVvtRyyrape 187 (369)
T KOG0665|consen 170 --------------------------------------------------------------TDFMMTPYVVTRYYRAPE 187 (369)
T ss_pred --------------------------------------------------------------cccccCchhheeeccCch
Confidence 112345789999999999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccC--------------------------------CC
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDR--------------------------------IL 547 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~--------------------------------~l 547 (1056)
++.+..|...+||||+||++.||+++ |++.....++.+.+... .+
T Consensus 188 vil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~f 267 (369)
T KOG0665|consen 188 VILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELF 267 (369)
T ss_pred heeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhC
Confidence 99998899999999999999999987 77776666664433221 11
Q ss_pred CCC-CC-------CCChhHHHHHHhccccCCCCCCCHHHHhhhhhhh
Q 001548 548 PPS-FL-------SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (1056)
Q Consensus 548 p~~-~~-------~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~ 586 (1056)
|.. |+ .......+++.+||..||++|.+++++|+|||++
T Consensus 268 pD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 268 PDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred CcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 110 11 2234467999999999999999999999999997
No 278
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.94 E-value=2.7e-26 Score=252.33 Aligned_cols=205 Identities=18% Similarity=0.175 Sum_probs=156.1
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+......+... ..+++|++|++|.++|.+.. .++...++.++.||+.||
T Consensus 44 ~~~l~~l~h~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~i~~~l 106 (262)
T cd05572 44 KEILEECNHPFIVKLYRTFKDKKYI----------------YMLMEYCLGGELWTILRDRG-LFDEYTARFYIACVVLAF 106 (262)
T ss_pred HHHHHhCCCCCEeeeeeeEEcCCcc----------------EEEEecCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHH
Confidence 4567788999999876653322111 13889999999999997654 467778999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++|++|+||||+||+++.++.++++|||+++......
T Consensus 107 ~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--------------------------------------- 147 (262)
T cd05572 107 EYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--------------------------------------- 147 (262)
T ss_pred HHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---------------------------------------
Confidence 99999999999999999999999999999999886643100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
......+++.|+|||
T Consensus 148 -----------------------------------------------------------------~~~~~~~~~~~~~PE 162 (262)
T cd05572 148 -----------------------------------------------------------------KTWTFCGTPEYVAPE 162 (262)
T ss_pred -----------------------------------------------------------------ccccccCCcCccChh
Confidence 000345778899999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcHH--HHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCC--
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSER--ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT-- 575 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~--~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt-- 575 (1056)
.+.+..++.++|+|||||++|+|+++ |.... ..............+......++.+.+|+.+||+++|.+||+
T Consensus 163 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~ 242 (262)
T cd05572 163 IILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNL 242 (262)
T ss_pred HhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCc
Confidence 99888899999999999999999986 32222 222222222112222222334788999999999999999999
Q ss_pred ---HHHHhhhhhhhhh
Q 001548 576 ---TREILQSEVTNEF 588 (1056)
Q Consensus 576 ---~~eil~~~~~~~~ 588 (1056)
+.|+++||||...
T Consensus 243 ~~~~~~l~~~~~~~~~ 258 (262)
T cd05572 243 KGGIKDIKKHKWFNGF 258 (262)
T ss_pred ccCHHHHhcChhhhCC
Confidence 9999999999864
No 279
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.94 E-value=3.9e-26 Score=254.59 Aligned_cols=206 Identities=17% Similarity=0.107 Sum_probs=151.7
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...++...|||++.+......+... +-..+|+|++|++|.+++......++...+..++.||+.||
T Consensus 57 ~~~l~~l~h~~i~~~~~~~~~~~~~--------------~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL 122 (284)
T cd05079 57 IEILRNLYHENIVKYKGICTEDGGN--------------GIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGM 122 (284)
T ss_pred HHHHHhCCCCCeeeeeeEEecCCCC--------------ceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence 4467778999988755443211000 01248999999999999977655678889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+||+++.++.+|++|||+++........
T Consensus 123 ~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~------------------------------------- 165 (284)
T cd05079 123 DYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEY------------------------------------- 165 (284)
T ss_pred HHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCccc-------------------------------------
Confidence 9999999999999999999999999999999988764310000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
........++..|+|||
T Consensus 166 ---------------------------------------------------------------~~~~~~~~~~~~y~apE 182 (284)
T cd05079 166 ---------------------------------------------------------------YTVKDDLDSPVFWYAPE 182 (284)
T ss_pred ---------------------------------------------------------------eeecCCCCCCccccCHH
Confidence 00000234566799999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCCCCcH-----------------HHHHHHHHhhccCCCCCCCCCCChhHHHHHHhc
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGRFDSE-----------------RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQ 565 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~f~~~-----------------~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~l 565 (1056)
.+.+..++.++|||||||++|||+++..+. .........+......+.....++.+.+|+.+|
T Consensus 183 ~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 262 (284)
T cd05079 183 CLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKC 262 (284)
T ss_pred HhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHH
Confidence 999888999999999999999999742111 011111222222233344456788999999999
Q ss_pred cccCCCCCCCHHHHhhh
Q 001548 566 LHPEPLSRPTTREILQS 582 (1056)
Q Consensus 566 L~~dP~~Rpt~~eil~~ 582 (1056)
|+++|.+||++.++++.
T Consensus 263 l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 263 WEFQPSKRTTFQNLIEG 279 (284)
T ss_pred ccCCcccCcCHHHHHHH
Confidence 99999999999999874
No 280
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.94 E-value=2.9e-26 Score=252.08 Aligned_cols=246 Identities=14% Similarity=0.120 Sum_probs=170.4
Q ss_pred ccccceeeeCCCCC-ccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcc
Q 001548 220 LKGKGIVCRGPPLN-AFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1056)
Q Consensus 220 ~~g~Gvv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1056)
.+|.|.||++...+ +..+ ..+.........+...-......++...|+|++.+......+..
T Consensus 11 ~g~~~~v~~~~~~~~~~~~-----~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~------------ 73 (267)
T cd06610 11 VGATAVVYAAICLPNNEKV-----AIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDE------------ 73 (267)
T ss_pred CCCCeEEEEEEEcCCCcEE-----EEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCE------------
Confidence 35779999997521 1111 11111111122222222333456778899998876544321111
Q ss_pred cccCCCcccccCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchh
Q 001548 299 CWIGGLRQGSSDHGVNLREWLNARG--HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1056)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~--~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla 376 (1056)
...++++++|++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.+|++|||++
T Consensus 74 ----~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~ 149 (267)
T cd06610 74 ----LWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVS 149 (267)
T ss_pred ----EEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchH
Confidence 124899999999999997642 35788899999999999999999999999999999999999999999999998
Q ss_pred hcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCC
Q 001548 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1056)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~ 456 (1056)
.........
T Consensus 150 ~~~~~~~~~----------------------------------------------------------------------- 158 (267)
T cd06610 150 ASLADGGDR----------------------------------------------------------------------- 158 (267)
T ss_pred HHhccCccc-----------------------------------------------------------------------
Confidence 775521000
Q ss_pred CcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCC-CCCccchhHHHHHHHHHHhCCCCcH---
Q 001548 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELFGRFDSE--- 532 (1056)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~~t~~sDIwSLGvlL~eLlt~f~~~--- 532 (1056)
.........|+..|+|||.+... .++.++|+|||||++|+|++|..++
T Consensus 159 ----------------------------~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~ 210 (267)
T cd06610 159 ----------------------------TRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKY 210 (267)
T ss_pred ----------------------------cccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCcccc
Confidence 00000134678899999998876 7899999999999999999973332
Q ss_pred HHHHHHHHhhccC--CCCCC--CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 533 RALAAAMSDLRDR--ILPPS--FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 533 ~~~~~~~~~~~~~--~lp~~--~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
.........+... .++.. ....++.+.+|+.+||+.||.+||++.+|++||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 211 PPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred ChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 2222223322221 11111 12556788999999999999999999999999997
No 281
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.94 E-value=1.9e-25 Score=241.28 Aligned_cols=284 Identities=19% Similarity=0.196 Sum_probs=230.2
Q ss_pred cccccccccccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCC
Q 001548 722 DNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSK 801 (1056)
Q Consensus 722 ~~~~l~gh~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg 801 (1056)
....+.-|...+.++.+.. +.+...++.+|..|++|+....+ ..+ .+.+.+..+.|+++.|++++..+++++.|+
T Consensus 167 ~~~~ld~h~gev~~v~~l~--~sdtlatgg~Dr~Ik~W~v~~~k--~~~-~~tLaGs~g~it~~d~d~~~~~~iAas~d~ 241 (459)
T KOG0288|consen 167 ALFVLDAHEGEVHDVEFLR--NSDTLATGGSDRIIKLWNVLGEK--SEL-ISTLAGSLGNITSIDFDSDNKHVIAASNDK 241 (459)
T ss_pred hhhhhhccccccceeEEcc--Ccchhhhcchhhhhhhhhcccch--hhh-hhhhhccCCCcceeeecCCCceEEeecCCC
Confidence 3566777888888887732 33444588999999999965433 111 234668889999999999999999999999
Q ss_pred cEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEec
Q 001548 802 KIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQ 881 (1056)
Q Consensus 802 ~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp 881 (1056)
.+++|+++. ........+|+.+|+++.|... ...+++|++|.+|++||+....|.+++- ....++.|..+
T Consensus 242 ~~r~Wnvd~-------~r~~~TLsGHtdkVt~ak~~~~-~~~vVsgs~DRtiK~WDl~k~~C~kt~l-~~S~cnDI~~~- 311 (459)
T KOG0288|consen 242 NLRLWNVDS-------LRLRHTLSGHTDKVTAAKFKLS-HSRVVSGSADRTIKLWDLQKAYCSKTVL-PGSQCNDIVCS- 311 (459)
T ss_pred ceeeeeccc-------hhhhhhhcccccceeeehhhcc-ccceeeccccchhhhhhhhhhheecccc-ccccccceEec-
Confidence 999999974 3344556689999999999876 4449999999999999999999888775 45667777775
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCceeEEEeCCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEe------cC
Q 001548 882 VHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVL------AG 955 (1056)
Q Consensus 882 ~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l------~g 955 (1056)
+..++||-.|++|+.||+|+..+..+....+.|+++..++++. -+.+++.|.++.+.|+|+... ..++ .+
T Consensus 312 --~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~-~lLsssRDdtl~viDlRt~eI-~~~~sA~g~k~a 387 (459)
T KOG0288|consen 312 --ISDVISGHFDKKVRFWDIRSADKTRSVPLGGRVTSLDLSMDGL-ELLSSSRDDTLKVIDLRTKEI-RQTFSAEGFKCA 387 (459)
T ss_pred --ceeeeecccccceEEEeccCCceeeEeecCcceeeEeeccCCe-EEeeecCCCceeeeecccccE-EEEeeccccccc
Confidence 3578999999999999999999999999999999999999997 455569999999999999765 2333 33
Q ss_pred CCCCeEEEEEc-CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCC-C-cEEEEEecCCcceeeEEeeCCCCEE
Q 001548 956 HEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHT-N-EKVGICRLEHNLFPFTIFNLSDCWL 1032 (1056)
Q Consensus 956 H~~~V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~-~-~Vv~ls~~~~~~~~~~~~s~~g~~l 1032 (1056)
|. ++.+.|+ ++.++++||.||.|+||++. ++++...+...+ + .|.+++ |.|.|..+
T Consensus 388 sD--wtrvvfSpd~~YvaAGS~dgsv~iW~v~--------tgKlE~~l~~s~s~~aI~s~~-----------W~~sG~~L 446 (459)
T KOG0288|consen 388 SD--WTRVVFSPDGSYVAAGSADGSVYIWSVF--------TGKLEKVLSLSTSNAAITSLS-----------WNPSGSGL 446 (459)
T ss_pred cc--cceeEECCCCceeeeccCCCcEEEEEcc--------CceEEEEeccCCCCcceEEEE-----------EcCCCchh
Confidence 43 8889999 56789999999999999998 667777776543 3 366666 99999999
Q ss_pred EEEEcCCcEEEEe
Q 001548 1033 LLVCFDFTTLSFR 1045 (1056)
Q Consensus 1033 ~s~s~D~~v~iW~ 1045 (1056)
++++.++.+.+|.
T Consensus 447 lsadk~~~v~lW~ 459 (459)
T KOG0288|consen 447 LSADKQKAVTLWT 459 (459)
T ss_pred hcccCCcceEecC
Confidence 9999999999994
No 282
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.94 E-value=1.9e-26 Score=259.90 Aligned_cols=199 Identities=16% Similarity=0.109 Sum_probs=146.4
Q ss_pred hhhccC-CCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC---------------CCCC
Q 001548 264 MMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------------HKGK 327 (1056)
Q Consensus 264 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~---------------~~~~ 327 (1056)
..+... .|||++.+......+.. + ..+|+|++|++|.+++...+ ..++
T Consensus 59 ~~l~~l~~h~~iv~~~~~~~~~~~---------~-------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~ 122 (303)
T cd05088 59 EVLCKLGHHPNIINLLGACEHRGY---------L-------YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 122 (303)
T ss_pred HHHHHhcCCCCcceEEEEECCCCC---------c-------eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCC
Confidence 344455 79999976665332211 1 23899999999999997543 2467
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccc
Q 001548 328 RIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTT 407 (1056)
Q Consensus 328 ~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (1056)
...++.++.||+.||+|||++||+||||||+|||++.++.+|++|||+++......
T Consensus 123 ~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~------------------------ 178 (303)
T cd05088 123 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV------------------------ 178 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCcccchhh------------------------
Confidence 77899999999999999999999999999999999999999999999875321000
Q ss_pred cccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccc
Q 001548 408 GIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQST 487 (1056)
Q Consensus 408 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (1056)
.
T Consensus 179 -----------------------------------------------------~-------------------------- 179 (303)
T cd05088 179 -----------------------------------------------------K-------------------------- 179 (303)
T ss_pred -----------------------------------------------------h--------------------------
Confidence 0
Q ss_pred cccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHH
Q 001548 488 SVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCL 563 (1056)
Q Consensus 488 ~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~ 563 (1056)
-....++..|+|||.+.+..++.++|||||||+||||++ + |...... .....+.....++.....++.+.+|+.
T Consensus 180 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~ 257 (303)
T cd05088 180 -KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQGYRLEKPLNCDDEVYDLMR 257 (303)
T ss_pred -cccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH-HHHHHHhcCCcCCCCCCCCHHHHHHHH
Confidence 001123456999999988889999999999999999996 4 3222211 222222222222233346788999999
Q ss_pred hccccCCCCCCCHHHHhhhh
Q 001548 564 WQLHPEPLSRPTTREILQSE 583 (1056)
Q Consensus 564 ~lL~~dP~~Rpt~~eil~~~ 583 (1056)
+||+.+|.+||++.+++++.
T Consensus 258 ~~l~~~p~~Rp~~~~il~~l 277 (303)
T cd05088 258 QCWREKPYERPSFAQILVSL 277 (303)
T ss_pred HHcCCChhhCcCHHHHHHHH
Confidence 99999999999999999863
No 283
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.94 E-value=3.9e-26 Score=250.56 Aligned_cols=203 Identities=17% Similarity=0.191 Sum_probs=153.3
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++...+||||+.+......+... ...|++++|++|.+++......+++..+..++.||+.||
T Consensus 51 ~~~l~~~~h~~i~~~~~~~~~~~~~----------------~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l 114 (262)
T cd06613 51 ISMLKECRHPNIVAYFGSYLRRDKL----------------WIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGL 114 (262)
T ss_pred HHHHHhCCCCChhceEEEEEeCCEE----------------EEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHH
Confidence 4567788999999876553322211 148999999999999987655678889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+|+||||+||+++.++.+|++|||++.......
T Consensus 115 ~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--------------------------------------- 155 (262)
T cd06613 115 AYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI--------------------------------------- 155 (262)
T ss_pred HHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhh---------------------------------------
Confidence 99999999999999999999999999999999886543100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......++..|+|||
T Consensus 156 ----------------------------------------------------------------~~~~~~~~~~~y~~Pe 171 (262)
T cd06613 156 ----------------------------------------------------------------AKRKSFIGTPYWMAPE 171 (262)
T ss_pred ----------------------------------------------------------------hccccccCCccccCch
Confidence 0001346788899999
Q ss_pred cccCC---CCCccchhHHHHHHHHHHhCCCCcH---HHHHHHHHhhccCCCCC---CCCCCChhHHHHHHhccccCCCCC
Q 001548 503 ELSGG---VCTTSSNIYSLGVLFFELFGRFDSE---RALAAAMSDLRDRILPP---SFLSENPKEAGFCLWQLHPEPLSR 573 (1056)
Q Consensus 503 ~l~~~---~~t~~sDIwSLGvlL~eLlt~f~~~---~~~~~~~~~~~~~~lp~---~~~~~~~~~~~li~~lL~~dP~~R 573 (1056)
.+.+. .++.++|||||||++|||+++..+. ...............++ .....++.+.+|+.+||.++|..|
T Consensus 172 ~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 251 (262)
T cd06613 172 VAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKR 251 (262)
T ss_pred hhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhC
Confidence 99876 7899999999999999999873332 11111111111111111 122345678899999999999999
Q ss_pred CCHHHHhhhhh
Q 001548 574 PTTREILQSEV 584 (1056)
Q Consensus 574 pt~~eil~~~~ 584 (1056)
||+.+|+.|+|
T Consensus 252 pt~~~il~~~~ 262 (262)
T cd06613 252 PTATKLLQHPF 262 (262)
T ss_pred CCHHHHhcCCC
Confidence 99999999997
No 284
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.94 E-value=3.1e-26 Score=252.39 Aligned_cols=209 Identities=16% Similarity=0.132 Sum_probs=155.2
Q ss_pred hhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Q 001548 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~g 341 (1056)
..+.++..+|||++.+......+. +...++++++|++|.++++..+ .+++..++.+++||+.|
T Consensus 53 e~~~l~~l~h~~iv~~~~~~~~~~----------------~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~a 115 (268)
T cd06630 53 EIRLMARLNHPHIIRMLGATCEDS----------------HFNLFVEWMAGGSVSHLLSKYG-AFKEAVIINYTEQLLRG 115 (268)
T ss_pred HHHHHHHcCCCceehhhceeccCC----------------eEEEEEeccCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHH
Confidence 356777789999997665533111 1224899999999999997654 46677899999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCC-cEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSN-QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~-~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 420 (1056)
|.|||++||+|+||||+||+++.++ .+|++|||++..........
T Consensus 116 l~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~---------------------------------- 161 (268)
T cd06630 116 LSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGA---------------------------------- 161 (268)
T ss_pred HHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccccC----------------------------------
Confidence 9999999999999999999998776 59999999986654110000
Q ss_pred ccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccC
Q 001548 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (1056)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 500 (1056)
........||..|+|
T Consensus 162 -----------------------------------------------------------------~~~~~~~~~~~~~~~ 176 (268)
T cd06630 162 -----------------------------------------------------------------GEFQGQLLGTIAFMA 176 (268)
T ss_pred -----------------------------------------------------------------CccccccccccceeC
Confidence 000003467888999
Q ss_pred cccccCCCCCccchhHHHHHHHHHHhCCCCcH---H--HHHHHH-HhhccCCCCCCCCCCChhHHHHHHhccccCCCCCC
Q 001548 501 PEELSGGVCTTSSNIYSLGVLFFELFGRFDSE---R--ALAAAM-SDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP 574 (1056)
Q Consensus 501 PE~l~~~~~t~~sDIwSLGvlL~eLlt~f~~~---~--~~~~~~-~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rp 574 (1056)
||.+.+..++.++|||||||++|+|+++..++ . .....+ ........++.....++.+.+|+.+||..+|.+||
T Consensus 177 PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~ 256 (268)
T cd06630 177 PEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRP 256 (268)
T ss_pred HhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCc
Confidence 99999888999999999999999999863221 1 111112 11122222333345678899999999999999999
Q ss_pred CHHHHhhhhhhh
Q 001548 575 TTREILQSEVTN 586 (1056)
Q Consensus 575 t~~eil~~~~~~ 586 (1056)
++.++++||||.
T Consensus 257 ~~~~ll~~~~~~ 268 (268)
T cd06630 257 PSRELLKHPVFR 268 (268)
T ss_pred CHHHHhcCcccC
Confidence 999999999984
No 285
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.94 E-value=5.1e-26 Score=256.34 Aligned_cols=201 Identities=18% Similarity=0.178 Sum_probs=149.1
Q ss_pred hhhccC-CCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC---------------CCCC
Q 001548 264 MMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------------HKGK 327 (1056)
Q Consensus 264 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~---------------~~~~ 327 (1056)
..+... .||||+.+......+... ..+|+|+.+++|.++|.... ..++
T Consensus 72 ~~l~~l~~h~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 135 (304)
T cd05101 72 EMMKMIGKHKNIINLLGACTQDGPL----------------YVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMT 135 (304)
T ss_pred HHHHhhccCCCchheeEEEecCCce----------------EEEEecCCCCcHHHHHHhcCCcccccccccccCCccccc
Confidence 345555 799999866553321111 14899999999999997642 2356
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccc
Q 001548 328 RIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTT 407 (1056)
Q Consensus 328 ~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (1056)
...++.++.||+.||.|||++||+||||||+||+++.++.+|++|||+++........
T Consensus 136 ~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~---------------------- 193 (304)
T cd05101 136 FKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYY---------------------- 193 (304)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccceeccccccc----------------------
Confidence 6678999999999999999999999999999999999999999999998765410000
Q ss_pred cccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccc
Q 001548 408 GIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQST 487 (1056)
Q Consensus 408 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (1056)
.
T Consensus 194 -------------------------------------------------------------------------------~ 194 (304)
T cd05101 194 -------------------------------------------------------------------------------K 194 (304)
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred cccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHH
Q 001548 488 SVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCL 563 (1056)
Q Consensus 488 ~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~ 563 (1056)
......+++.|+|||++.+..++.++|||||||+||||++ + |... ........+.....+......+..+.+|+.
T Consensus 195 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 273 (304)
T cd05101 195 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDKPANCTNELYMMMR 273 (304)
T ss_pred cccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC-CHHHHHHHHHcCCcCCCCCCCCHHHHHHHH
Confidence 0002234567999999998889999999999999999997 3 2221 222333333333333334466788999999
Q ss_pred hccccCCCCCCCHHHHhhh
Q 001548 564 WQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 564 ~lL~~dP~~Rpt~~eil~~ 582 (1056)
+||+++|.+||++.++++.
T Consensus 274 ~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 274 DCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred HHcccChhhCCCHHHHHHH
Confidence 9999999999999999985
No 286
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.94 E-value=3.7e-26 Score=255.64 Aligned_cols=203 Identities=17% Similarity=0.232 Sum_probs=145.2
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....|+||+.+......+... ..+++++. ++|.+++......+....++.++.||+.||
T Consensus 54 ~~~l~~l~h~ni~~~~~~~~~~~~~----------------~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L 116 (291)
T cd07870 54 ASLLKGLKHANIVLLHDIIHTKETL----------------TFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGL 116 (291)
T ss_pred HHHHHhcCCCCEeEEEEEEecCCeE----------------EEEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 3457777899998765553321111 13788885 678777765544566778999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+|+||||+||+++.++.+||+|||+++......
T Consensus 117 ~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~--------------------------------------- 157 (291)
T cd07870 117 AYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS--------------------------------------- 157 (291)
T ss_pred HHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCC---------------------------------------
Confidence 99999999999999999999999999999999886533100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......++++|+|||
T Consensus 158 ----------------------------------------------------------------~~~~~~~~~~~y~aPE 173 (291)
T cd07870 158 ----------------------------------------------------------------QTYSSEVVTLWYRPPD 173 (291)
T ss_pred ----------------------------------------------------------------CCCCCccccccccCCc
Confidence 0001335688899999
Q ss_pred cccCC-CCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhh-c--------------c------CCC----CC----
Q 001548 503 ELSGG-VCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDL-R--------------D------RIL----PP---- 549 (1056)
Q Consensus 503 ~l~~~-~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~-~--------------~------~~l----p~---- 549 (1056)
.+.+. .++.++|||||||+||||++| |............. . . ... ++
T Consensus 174 ~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (291)
T cd07870 174 VLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRV 253 (291)
T ss_pred eeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhh
Confidence 98764 578999999999999999987 33222111111110 0 0 000 00
Q ss_pred --CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 550 --SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 550 --~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
......+.+.+|+.+||..||++|||+.|++.||||
T Consensus 254 ~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 254 VWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred hccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 011235678899999999999999999999999997
No 287
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.94 E-value=3.3e-26 Score=250.73 Aligned_cols=194 Identities=16% Similarity=0.171 Sum_probs=144.9
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..+++...||||+.+...... . ....+|+|+.|++|.+++......++...++.+++||+.||
T Consensus 52 ~~~l~~l~h~~i~~~~~~~~~-~----------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l 114 (259)
T cd05037 52 ASLMSQLSHKHLVKLYGVCVR-D----------------ENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASAL 114 (259)
T ss_pred HHHHHcCCCcchhheeeEEec-C----------------CcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHH
Confidence 346788899999987665332 0 01248999999999999987665678888999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCC-------cEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSN-------QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~-------~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 415 (1056)
.|||++||+||||||+||+++.++ .+|++|||+++.....
T Consensus 115 ~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~--------------------------------- 161 (259)
T cd05037 115 HYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSR--------------------------------- 161 (259)
T ss_pred HHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcccccccc---------------------------------
Confidence 999999999999999999999887 7999999988654310
Q ss_pred cccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccC
Q 001548 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (1056)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 495 (1056)
....++
T Consensus 162 --------------------------------------------------------------------------~~~~~~ 167 (259)
T cd05037 162 --------------------------------------------------------------------------EERVER 167 (259)
T ss_pred --------------------------------------------------------------------------cccccC
Confidence 022345
Q ss_pred CCccCcccccCC--CCCccchhHHHHHHHHHHhCC-CCcHHHH--HHHHHhhccCCCCCCCCCCChhHHHHHHhccccCC
Q 001548 496 KWYASPEELSGG--VCTTSSNIYSLGVLFFELFGR-FDSERAL--AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEP 570 (1056)
Q Consensus 496 ~~Y~APE~l~~~--~~t~~sDIwSLGvlL~eLlt~-f~~~~~~--~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP 570 (1056)
..|+|||++.+. .++.++|||||||++|||+++ ..+.... .............+ ......+.+|+.+||..+|
T Consensus 168 ~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p 245 (259)
T cd05037 168 IPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQHRLP--MPDCAELANLINQCWTYDP 245 (259)
T ss_pred CCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcCCCCC--CCCchHHHHHHHHHhccCh
Confidence 569999999886 789999999999999999974 2222111 11111111111111 1123788899999999999
Q ss_pred CCCCCHHHHhhh
Q 001548 571 LSRPTTREILQS 582 (1056)
Q Consensus 571 ~~Rpt~~eil~~ 582 (1056)
.+|||+.++++.
T Consensus 246 ~~Rpt~~~il~~ 257 (259)
T cd05037 246 TKRPSFRAILRD 257 (259)
T ss_pred hhCCCHHHHHHh
Confidence 999999999863
No 288
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.94 E-value=5.8e-26 Score=248.85 Aligned_cols=245 Identities=13% Similarity=0.015 Sum_probs=166.7
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCccc
Q 001548 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1056)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1056)
.+|.|+||++...+. .......+.+.............-......+....|||++.+...... .
T Consensus 5 ~g~~~~v~~~~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~-------------- 68 (257)
T cd05040 5 DGSFGVVRRGEWSTS-GGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-H-------------- 68 (257)
T ss_pred ccCcccEEeeeEecC-CCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-C--------------
Confidence 468899999976321 000000111111111111111222233456778899999986555332 0
Q ss_pred ccCCCcccccCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhc
Q 001548 300 WIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1056)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~ 378 (1056)
....+|++++|++|.+++.... ..++...+..++.||+.||.|||++||+|+||||+||+++.++.+|++|||+++.
T Consensus 69 --~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~ 146 (257)
T cd05040 69 --PLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRA 146 (257)
T ss_pred --eEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEecccccccc
Confidence 0124899999999999997765 4678889999999999999999999999999999999999999999999999877
Q ss_pred ccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCc
Q 001548 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1056)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~ 458 (1056)
+......
T Consensus 147 ~~~~~~~------------------------------------------------------------------------- 153 (257)
T cd05040 147 LPQNEDH------------------------------------------------------------------------- 153 (257)
T ss_pred ccccccc-------------------------------------------------------------------------
Confidence 5411000
Q ss_pred ccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-CCCcH---HH
Q 001548 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSE---RA 534 (1056)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~f~~~---~~ 534 (1056)
........++..|+|||.+.+..++.++|||||||++|||++ +..+. ..
T Consensus 154 ---------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~ 206 (257)
T cd05040 154 ---------------------------YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSG 206 (257)
T ss_pred ---------------------------eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCH
Confidence 000002345667999999998899999999999999999997 53332 22
Q ss_pred HHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001548 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 535 ~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~ 582 (1056)
..............+.....+..+.+++.+||+.+|++||++.++++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~ 254 (257)
T cd05040 207 SQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREF 254 (257)
T ss_pred HHHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHH
Confidence 221111121222223333556788999999999999999999999863
No 289
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.94 E-value=2.7e-26 Score=256.80 Aligned_cols=201 Identities=15% Similarity=0.160 Sum_probs=149.7
Q ss_pred hhhccC-CCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhc---------------CCCCC
Q 001548 264 MMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR---------------GHKGK 327 (1056)
Q Consensus 264 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~---------------~~~~~ 327 (1056)
..+... +||||+.+......+.. ....|+|+.+++|.+++... ...++
T Consensus 67 ~~l~~l~~h~~i~~~~~~~~~~~~----------------~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~ 130 (293)
T cd05053 67 EMMKMIGKHKNIINLLGVCTQEGP----------------LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLT 130 (293)
T ss_pred HHHHhhcCCCCeeeEEEEEcCCCC----------------eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccC
Confidence 345555 79999876554321111 12489999999999999643 34577
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccc
Q 001548 328 RIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTT 407 (1056)
Q Consensus 328 ~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (1056)
...++.++.||+.||+|||++||+||||||+||+++.++.+|++|||+++........
T Consensus 131 ~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~---------------------- 188 (293)
T cd05053 131 QKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYY---------------------- 188 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccccccccccccce----------------------
Confidence 8889999999999999999999999999999999999999999999998765411000
Q ss_pred cccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccc
Q 001548 408 GIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQST 487 (1056)
Q Consensus 408 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (1056)
.
T Consensus 189 -------------------------------------------------------------------------------~ 189 (293)
T cd05053 189 -------------------------------------------------------------------------------R 189 (293)
T ss_pred -------------------------------------------------------------------------------e
Confidence 0
Q ss_pred cccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHH
Q 001548 488 SVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCL 563 (1056)
Q Consensus 488 ~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~ 563 (1056)
......++..|+|||++.+..++.++|||||||++|||++ + |... ........+.....++.....++.+.+|+.
T Consensus 190 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 268 (293)
T cd05053 190 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI-PVEELFKLLKEGYRMEKPQNCTQELYHLMR 268 (293)
T ss_pred ccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCC-CHHHHHHHHHcCCcCCCCCCCCHHHHHHHH
Confidence 0001223456999999998899999999999999999986 4 3322 122233334444444444566788999999
Q ss_pred hccccCCCCCCCHHHHhhh
Q 001548 564 WQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 564 ~lL~~dP~~Rpt~~eil~~ 582 (1056)
+||.+||.+|||+.+++++
T Consensus 269 ~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 269 DCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred HHcccCcccCcCHHHHHHH
Confidence 9999999999999999985
No 290
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=7.7e-25 Score=241.64 Aligned_cols=278 Identities=18% Similarity=0.197 Sum_probs=222.9
Q ss_pred ccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 001548 731 NLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNA 810 (1056)
Q Consensus 731 ~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t 810 (1056)
+.|.++.+. ...|.+...++ .-.+.+++..+.....++ .--...|+++.|-.||++||+|...|.|+|||+.+
T Consensus 27 ~~vssl~fs-p~~P~d~aVt~-S~rvqly~~~~~~~~k~~-----srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~ 99 (487)
T KOG0310|consen 27 NSVSSLCFS-PKHPYDFAVTS-SVRVQLYSSVTRSVRKTF-----SRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKS 99 (487)
T ss_pred CcceeEecC-CCCCCceEEec-ccEEEEEecchhhhhhhH-----HhhccceeEEEeecCCeEEEccCCcCcEEEecccc
Confidence 456666662 23444433332 344666665444433333 23457899999999999999999999999999653
Q ss_pred CCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEE
Q 001548 811 LFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASG 890 (1056)
Q Consensus 811 ~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSg 890 (1056)
........+|..+|..+.|+|..+..|++|+.|+.+++||+.+......+.+|++-|.|.+|+|.++.+++||
T Consensus 100 -------r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtG 172 (487)
T KOG0310|consen 100 -------RVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTG 172 (487)
T ss_pred -------HHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEec
Confidence 1233345679999999999999899999999999999999999887668899999999999999888999999
Q ss_pred eCCCcEEEEECCCC-ceeEEEeCCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CC
Q 001548 891 SDDCSVKLWNINEK-NSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DS 968 (1056)
Q Consensus 891 s~Dg~V~IWDlr~~-~~~~~~~~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs-~~ 968 (1056)
|.||+|++||+|+. ..+..+.|..+|..|.|-|.|. ++|+++ .+.|++||+-++...+..+..|.+.|+|+.+. ++
T Consensus 173 sYDg~vrl~DtR~~~~~v~elnhg~pVe~vl~lpsgs-~iasAg-Gn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~ 250 (487)
T KOG0310|consen 173 SYDGKVRLWDTRSLTSRVVELNHGCPVESVLALPSGS-LIASAG-GNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDS 250 (487)
T ss_pred CCCceEEEEEeccCCceeEEecCCCceeeEEEcCCCC-EEEEcC-CCeEEEEEecCCceehhhhhcccceEEEEEeecCC
Confidence 99999999999988 7788999999999999999987 666654 45799999998877667777799999999998 77
Q ss_pred CEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEE
Q 001548 969 GTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSF 1044 (1056)
Q Consensus 969 ~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW 1044 (1056)
..|+|||-|+.+|+||+.+ -+.++.+ ...++|++++ .+|+++.++.|..|+.+.+=
T Consensus 251 ~rLlS~sLD~~VKVfd~t~--------~Kvv~s~-~~~~pvLsia-----------vs~dd~t~viGmsnGlv~~r 306 (487)
T KOG0310|consen 251 TRLLSGSLDRHVKVFDTTN--------YKVVHSW-KYPGPVLSIA-----------VSPDDQTVVIGMSNGLVSIR 306 (487)
T ss_pred ceEeecccccceEEEEccc--------eEEEEee-ecccceeeEE-----------ecCCCceEEEecccceeeee
Confidence 8899999999999999762 2344444 3678888888 67788888888888887654
No 291
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.94 E-value=2.2e-27 Score=260.45 Aligned_cols=183 Identities=18% Similarity=0.243 Sum_probs=147.0
Q ss_pred cccccCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccc
Q 001548 305 RQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESA 383 (1056)
Q Consensus 305 ~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~ 383 (1056)
.++..+.||+|.=.|-+.| +.+++..++.|+.+|+.||++||+.+||.|||||+||||+..|+|.|+|+|||.++.+
T Consensus 262 lVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~-- 339 (591)
T KOG0986|consen 262 LVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE-- 339 (591)
T ss_pred EEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCC--
Confidence 4788899999998885544 5688889999999999999999999999999999999999999999999999977652
Q ss_pred cCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccc
Q 001548 384 SLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHT 463 (1056)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~ 463 (1056)
T Consensus 340 -------------------------------------------------------------------------------- 339 (591)
T KOG0986|consen 340 -------------------------------------------------------------------------------- 339 (591)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCCCCcHHHHHHHHH--h
Q 001548 464 NAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMS--D 541 (1056)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~f~~~~~~~~~~~--~ 541 (1056)
.+..+..+||..|||||++..+.|+.+.|+|||||+||||+.|-.++..+....+ .
T Consensus 340 ----------------------g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eE 397 (591)
T KOG0986|consen 340 ----------------------GKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREE 397 (591)
T ss_pred ----------------------CCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHH
Confidence 0112356999999999999999999999999999999999987555543333222 1
Q ss_pred hccCCC--CCC-CCCCChhHHHHHHhccccCCCCCCC-----HHHHhhhhhhhhhhhh
Q 001548 542 LRDRIL--PPS-FLSENPKEAGFCLWQLHPEPLSRPT-----TREILQSEVTNEFQEV 591 (1056)
Q Consensus 542 ~~~~~l--p~~-~~~~~~~~~~li~~lL~~dP~~Rpt-----~~eil~~~~~~~~~~~ 591 (1056)
+..+.+ +.. ....+++.++||..+|++||++|.. +.++.+||||......
T Consensus 398 vdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~ 455 (591)
T KOG0986|consen 398 VDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWR 455 (591)
T ss_pred HHHHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHh
Confidence 222221 111 1345888999999999999999975 5699999999976443
No 292
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.94 E-value=3.9e-26 Score=253.60 Aligned_cols=193 Identities=16% Similarity=0.155 Sum_probs=142.0
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+......+... ..+|+|++|++|..++......++...+..++.||+.||
T Consensus 67 ~~~~~~l~h~niv~~~~~~~~~~~~----------------~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l 130 (274)
T cd05076 67 ASLMSQVSHIHLAFVHGVCVRGSEN----------------IMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASAL 130 (274)
T ss_pred HHHHhcCCCCCeeeEEEEEEeCCce----------------EEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 3467778999999876654322211 138999999999999977666677889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCC-------cEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSN-------QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~-------~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 415 (1056)
+|||++||+||||||+|||++..+ .+|++|||++.....
T Consensus 131 ~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~---------------------------------- 176 (274)
T cd05076 131 SYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALS---------------------------------- 176 (274)
T ss_pred HHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCcccccccc----------------------------------
Confidence 999999999999999999997643 378888887643220
Q ss_pred cccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccC
Q 001548 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (1056)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 495 (1056)
.....++
T Consensus 177 -------------------------------------------------------------------------~~~~~~~ 183 (274)
T cd05076 177 -------------------------------------------------------------------------REERVER 183 (274)
T ss_pred -------------------------------------------------------------------------ccccccC
Confidence 0022456
Q ss_pred CCccCcccccC-CCCCccchhHHHHHHHHHHh-CC---CCcHHHHHHHHHhhcc-CCCCCCCCCCChhHHHHHHhccccC
Q 001548 496 KWYASPEELSG-GVCTTSSNIYSLGVLFFELF-GR---FDSERALAAAMSDLRD-RILPPSFLSENPKEAGFCLWQLHPE 569 (1056)
Q Consensus 496 ~~Y~APE~l~~-~~~t~~sDIwSLGvlL~eLl-t~---f~~~~~~~~~~~~~~~-~~lp~~~~~~~~~~~~li~~lL~~d 569 (1056)
..|+|||.+.+ ..++.++|||||||++|||+ ++ |........ ...... ...| ....+.+.+|+.+||+.+
T Consensus 184 ~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~li~~cl~~~ 259 (274)
T cd05076 184 IPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK-ERFYEKKHRLP---EPSCKELATLISQCLTYE 259 (274)
T ss_pred CcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH-HHHHHhccCCC---CCCChHHHHHHHHHcccC
Confidence 67999999876 56899999999999999996 44 322211111 111111 1122 223578899999999999
Q ss_pred CCCCCCHHHHhhh
Q 001548 570 PLSRPTTREILQS 582 (1056)
Q Consensus 570 P~~Rpt~~eil~~ 582 (1056)
|.+||++.+||++
T Consensus 260 p~~Rps~~~il~~ 272 (274)
T cd05076 260 PTQRPSFRTILRD 272 (274)
T ss_pred hhhCcCHHHHHHh
Confidence 9999999999975
No 293
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.94 E-value=5.7e-26 Score=251.77 Aligned_cols=202 Identities=18% Similarity=0.138 Sum_probs=150.8
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC---------CCCCHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------HKGKRIECLY 333 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~---------~~~~~~~~~~ 333 (1056)
..++....||||+.+......+.. ...+|+++.+++|.++|.... ..+++..++.
T Consensus 60 ~~~l~~~~~~~i~~~~~~~~~~~~----------------~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 123 (277)
T cd05032 60 ASVMKEFNCHHVVRLLGVVSTGQP----------------TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQ 123 (277)
T ss_pred HHHHHhCCCCceeEEEEEEcCCCC----------------cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHH
Confidence 456677789999976665332211 124899999999999996532 2356678899
Q ss_pred HHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccc
Q 001548 334 IFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (1056)
Q Consensus 334 i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 413 (1056)
++.||+.||.|||+.||+||||||+||+++.++.+|++|||+++........
T Consensus 124 ~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~---------------------------- 175 (277)
T cd05032 124 MAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYY---------------------------- 175 (277)
T ss_pred HHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcccchhhccCccc----------------------------
Confidence 9999999999999999999999999999999999999999998765411000
Q ss_pred cccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccc
Q 001548 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (1056)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (1056)
.......
T Consensus 176 -------------------------------------------------------------------------~~~~~~~ 182 (277)
T cd05032 176 -------------------------------------------------------------------------RKGGKGL 182 (277)
T ss_pred -------------------------------------------------------------------------ccCCCCC
Confidence 0000234
Q ss_pred cCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccC
Q 001548 494 EEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPE 569 (1056)
Q Consensus 494 gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~d 569 (1056)
+|..|+|||.+.+..++.++|||||||++|||++ + |.... .......+.....++.....++.+.+|+.+||+++
T Consensus 183 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 261 (277)
T cd05032 183 LPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLS-NEEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYN 261 (277)
T ss_pred ccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCC-HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence 5677999999988889999999999999999997 4 33222 22223333333333334455788899999999999
Q ss_pred CCCCCCHHHHhhh
Q 001548 570 PLSRPTTREILQS 582 (1056)
Q Consensus 570 P~~Rpt~~eil~~ 582 (1056)
|++|||+.+++..
T Consensus 262 p~~Rpt~~~l~~~ 274 (277)
T cd05032 262 PKMRPTFLEIVSS 274 (277)
T ss_pred hhhCCCHHHHHHH
Confidence 9999999999864
No 294
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.94 E-value=2.6e-26 Score=264.67 Aligned_cols=209 Identities=16% Similarity=0.200 Sum_probs=149.6
Q ss_pred hhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Q 001548 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~g 341 (1056)
...++....|||++.+......+.... .. .....+|+++.| +|.+++... ++...+..++.||+.|
T Consensus 65 E~~~l~~l~h~~iv~~~~~~~~~~~~~-----~~-----~~~~lv~e~~~~-~l~~~~~~~---l~~~~~~~~~~ql~~a 130 (353)
T cd07850 65 ELVLMKLVNHKNIIGLLNVFTPQKSLE-----EF-----QDVYLVMELMDA-NLCQVIQMD---LDHERMSYLLYQMLCG 130 (353)
T ss_pred HHHHHHhcCCCCCcceeeeeccCCCcc-----cc-----CcEEEEEeccCC-CHHHHHhhc---CCHHHHHHHHHHHHHH
Confidence 345677789999998765533222111 00 011247888865 888888643 6777899999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|+|||++||+||||||+||+++.++.+|++|||+++......
T Consensus 131 L~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-------------------------------------- 172 (353)
T cd07850 131 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-------------------------------------- 172 (353)
T ss_pred HHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCC--------------------------------------
Confidence 999999999999999999999999999999999886543100
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
......+|+.|+||
T Consensus 173 ------------------------------------------------------------------~~~~~~~~~~y~aP 186 (353)
T cd07850 173 ------------------------------------------------------------------MMTPYVVTRYYRAP 186 (353)
T ss_pred ------------------------------------------------------------------CCCCCcccccccCH
Confidence 00134577889999
Q ss_pred ccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhc---c-------------------CC----------
Q 001548 502 EELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLR---D-------------------RI---------- 546 (1056)
Q Consensus 502 E~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~---~-------------------~~---------- 546 (1056)
|.+.+..++.++|||||||++|+|++| |...+....+...+. . +.
T Consensus 187 E~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (353)
T cd07850 187 EVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEEL 266 (353)
T ss_pred HHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhh
Confidence 999999999999999999999999986 433221111111100 0 00
Q ss_pred -----CCCC----CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001548 547 -----LPPS----FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1056)
Q Consensus 547 -----lp~~----~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~ 588 (1056)
.+.. ....++.+.+||.+||++||++|||+.|+|+||||...
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~ 317 (353)
T cd07850 267 FPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVW 317 (353)
T ss_pred CcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhc
Confidence 0000 01224457899999999999999999999999999753
No 295
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.94 E-value=2.3e-26 Score=252.80 Aligned_cols=236 Identities=17% Similarity=0.103 Sum_probs=164.1
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCccc
Q 001548 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1056)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1056)
.+|.|.||+|...+...+ ..+.........+ .-.....++....|||++.+.........
T Consensus 16 ~g~~g~v~~~~~~~~~~v-----~iK~~~~~~~~~~--~~~~e~~~l~~l~h~~i~~~~~~~~~~~~------------- 75 (261)
T cd05072 16 AGQFGEVWMGYYNNSTKV-----AVKTLKPGTMSVQ--AFLEEANLMKTLQHDKLVRLYAVVTKEEP------------- 75 (261)
T ss_pred CcCCceEEEEEecCCceE-----EEEEccCCchhHH--HHHHHHHHHHhCCCCCeeeEEEEEcCCCC-------------
Confidence 357899999986543322 1111111111111 11122456677789999876544221111
Q ss_pred ccCCCcccccCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhc
Q 001548 300 WIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1056)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~ 378 (1056)
....|++++|++|.+++... +...+...++.++.||+.||+|||+.||+||||||+||+++.++.+|++|||+++.
T Consensus 76 ---~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~ 152 (261)
T cd05072 76 ---IYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARV 152 (261)
T ss_pred ---cEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCcccee
Confidence 12489999999999999653 44577778899999999999999999999999999999999999999999999866
Q ss_pred ccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCc
Q 001548 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1056)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~ 458 (1056)
......
T Consensus 153 ~~~~~~-------------------------------------------------------------------------- 158 (261)
T cd05072 153 IEDNEY-------------------------------------------------------------------------- 158 (261)
T ss_pred cCCCce--------------------------------------------------------------------------
Confidence 431000
Q ss_pred ccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHH
Q 001548 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERA 534 (1056)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~ 534 (1056)
.......++..|+|||.+.+..++.++|||||||++|+|++ + |.....
T Consensus 159 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~ 210 (261)
T cd05072 159 ----------------------------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN 210 (261)
T ss_pred ----------------------------eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH
Confidence 00002234567999999998889999999999999999997 5 333222
Q ss_pred HHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001548 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1056)
Q Consensus 535 ~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~ 581 (1056)
. .....+.....++.....+..+.+|+.+||+++|++||++.++++
T Consensus 211 ~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 211 S-DVMSALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred H-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 2 222223333333444556788899999999999999999999875
No 296
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.94 E-value=5.8e-26 Score=249.15 Aligned_cols=201 Identities=16% Similarity=0.083 Sum_probs=149.5
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....|||++.+......+ ....+|+++.|++|.++|...+ .+++..++.++.||+.||
T Consensus 47 ~~~l~~l~h~~iv~~~~~~~~~-----------------~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l 108 (257)
T cd05060 47 ASVMAQLDHPCIVRLIGVCKGE-----------------PLMLVMELAPLGPLLKYLKKRR-EIPVSDLKELAHQVAMGM 108 (257)
T ss_pred HHHHHhcCCCCeeeEEEEEcCC-----------------ceEEEEEeCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHH
Confidence 4566777899998765432111 0123889999999999997765 567779999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||.+||+|+||||+||+++.++.+|++|||+++.+......
T Consensus 109 ~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~------------------------------------- 151 (257)
T cd05060 109 AYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY------------------------------------- 151 (257)
T ss_pred HHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcc-------------------------------------
Confidence 9999999999999999999999999999999988765410000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
........++..|+|||
T Consensus 152 ---------------------------------------------------------------~~~~~~~~~~~~y~aPE 168 (257)
T cd05060 152 ---------------------------------------------------------------YRATTAGRWPLKWYAPE 168 (257)
T ss_pred ---------------------------------------------------------------cccccCccccccccCHH
Confidence 00000112345699999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhC-CCCcHH--HHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFG-RFDSER--ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt-~f~~~~--~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~ei 579 (1056)
.+.+..++.++|||||||++|||++ +..++. ........+......+.....++.+.+++.+||.++|.+||++.++
T Consensus 169 ~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l 248 (257)
T cd05060 169 CINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSEL 248 (257)
T ss_pred HhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHH
Confidence 9998889999999999999999997 533321 1122223333333334445567889999999999999999999999
Q ss_pred hh
Q 001548 580 LQ 581 (1056)
Q Consensus 580 l~ 581 (1056)
++
T Consensus 249 ~~ 250 (257)
T cd05060 249 ES 250 (257)
T ss_pred HH
Confidence 76
No 297
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.94 E-value=8.4e-26 Score=254.54 Aligned_cols=215 Identities=13% Similarity=0.131 Sum_probs=151.6
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+........... ... ......+|+++.+ +|.+++......+++.+++.++.||+.||
T Consensus 62 ~~~l~~l~h~~iv~~~~~~~~~~~~~----~~~----~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al 132 (310)
T cd07865 62 IKILQLLKHENVVNLIEICRTKATPY----NRY----KGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGL 132 (310)
T ss_pred HHHHHhCCCCCccceEEEEecccccc----cCC----CceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence 45677889999998766533222111 000 0112347788765 89988877665678889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+|+||||+||+++.++.+|++|||++.........
T Consensus 133 ~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~------------------------------------- 175 (310)
T cd07865 133 YYIHRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNS------------------------------------- 175 (310)
T ss_pred HHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCccc-------------------------------------
Confidence 9999999999999999999999999999999998765411000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
........+++..|+|||
T Consensus 176 --------------------------------------------------------------~~~~~~~~~~~~~y~aPE 193 (310)
T cd07865 176 --------------------------------------------------------------KPNRYTNRVVTLWYRPPE 193 (310)
T ss_pred --------------------------------------------------------------CCCCccCcccCccccCcH
Confidence 000011346788899999
Q ss_pred cccCC-CCCccchhHHHHHHHHHHhCC---CCcHHHH--HHHHHhhccCCCCCC--------------------------
Q 001548 503 ELSGG-VCTTSSNIYSLGVLFFELFGR---FDSERAL--AAAMSDLRDRILPPS-------------------------- 550 (1056)
Q Consensus 503 ~l~~~-~~t~~sDIwSLGvlL~eLlt~---f~~~~~~--~~~~~~~~~~~lp~~-------------------------- 550 (1056)
.+.+. .++.++|||||||++|||+++ |...... ...+..+.....++.
T Consensus 194 ~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (310)
T cd07865 194 LLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKER 273 (310)
T ss_pred HhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHh
Confidence 98774 478999999999999999986 3222211 111112211111000
Q ss_pred --CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 551 --FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 551 --~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
....++.+.+||.+||++||.+|||++++|+||||
T Consensus 274 l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 274 LKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred cccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 01135667899999999999999999999999997
No 298
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.94 E-value=5.3e-26 Score=254.33 Aligned_cols=207 Identities=14% Similarity=0.108 Sum_probs=149.9
Q ss_pred hhccC-CCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHH
Q 001548 265 MVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVA 340 (1056)
Q Consensus 265 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~QIl~ 340 (1056)
++... .|||++.+........... .. ....+++|++|++|.++++. .+..+++..++.++.||+.
T Consensus 71 ~l~~l~~h~ni~~~~~~~~~~~~~~----~~-------~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~ 139 (291)
T cd06639 71 ILQSLPNHPNVVKFYGMFYKADKLV----GG-------QLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALL 139 (291)
T ss_pred HHHHhcCCCCeEEEEEEEEeccccC----CC-------eeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHH
Confidence 34444 7999987665533211110 00 11248999999999999863 3456788899999999999
Q ss_pred HHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccc
Q 001548 341 LVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (1056)
Q Consensus 341 gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 420 (1056)
||.|||+.||+||||||+||+++.++.+|++|||+++.......
T Consensus 140 al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~------------------------------------ 183 (291)
T cd06639 140 GLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL------------------------------------ 183 (291)
T ss_pred HHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhcccccc------------------------------------
Confidence 99999999999999999999999999999999998866431000
Q ss_pred ccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccC
Q 001548 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (1056)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 500 (1056)
......|+..|+|
T Consensus 184 -------------------------------------------------------------------~~~~~~~~~~y~a 196 (291)
T cd06639 184 -------------------------------------------------------------------RRNTSVGTPFWMA 196 (291)
T ss_pred -------------------------------------------------------------------cccCccCCccccC
Confidence 0002357788999
Q ss_pred cccccCC-----CCCccchhHHHHHHHHHHhCCCCc---HHHHHHHHHhhccCCCC--CCCCCCChhHHHHHHhccccCC
Q 001548 501 PEELSGG-----VCTTSSNIYSLGVLFFELFGRFDS---ERALAAAMSDLRDRILP--PSFLSENPKEAGFCLWQLHPEP 570 (1056)
Q Consensus 501 PE~l~~~-----~~t~~sDIwSLGvlL~eLlt~f~~---~~~~~~~~~~~~~~~lp--~~~~~~~~~~~~li~~lL~~dP 570 (1056)
||.+... .++.++|||||||++|||+++..+ ...........+ ...+ .........+.+|+.+||+++|
T Consensus 197 PE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~~p 275 (291)
T cd06639 197 PEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPR-NPPPTLLHPEKWCRSFNHFISQCLIKDF 275 (291)
T ss_pred hhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhc-CCCCCCCcccccCHHHHHHHHHHhhcCh
Confidence 9998653 368999999999999999987333 222222222222 2111 1122345678899999999999
Q ss_pred CCCCCHHHHhhhhhhh
Q 001548 571 LSRPTTREILQSEVTN 586 (1056)
Q Consensus 571 ~~Rpt~~eil~~~~~~ 586 (1056)
.+||++.+|++||||.
T Consensus 276 ~~Rps~~~il~~~~~~ 291 (291)
T cd06639 276 EARPSVTHLLEHPFIK 291 (291)
T ss_pred hhCcCHHHHhcCcccC
Confidence 9999999999999984
No 299
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.94 E-value=6.1e-26 Score=255.82 Aligned_cols=203 Identities=15% Similarity=0.133 Sum_probs=150.3
Q ss_pred hhhhccC-CCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHH
Q 001548 263 AMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVA 340 (1056)
Q Consensus 263 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~QIl~ 340 (1056)
..+++.. .||||+.+......+... ..+|+|+.|++|.+++.... ..++...++.++.||+.
T Consensus 89 ~~~l~~l~~h~~iv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~ 152 (302)
T cd05055 89 LKIMSHLGNHENIVNLLGACTIGGPI----------------LVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAK 152 (302)
T ss_pred HHHHHhccCCCCcceEEEEEecCCce----------------EEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 4456666 799999876653322211 24899999999999997543 34788899999999999
Q ss_pred HHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccc
Q 001548 341 LVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (1056)
Q Consensus 341 gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 420 (1056)
||.|||++||+|+||||+|||++.++.+|++|||+++........
T Consensus 153 ~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~----------------------------------- 197 (302)
T cd05055 153 GMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNY----------------------------------- 197 (302)
T ss_pred HHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccccCCCce-----------------------------------
Confidence 999999999999999999999999999999999998664310000
Q ss_pred ccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccC
Q 001548 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (1056)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 500 (1056)
.......++..|+|
T Consensus 198 ------------------------------------------------------------------~~~~~~~~~~~y~a 211 (302)
T cd05055 198 ------------------------------------------------------------------VVKGNARLPVKWMA 211 (302)
T ss_pred ------------------------------------------------------------------eecCCCCcccccCC
Confidence 00002235677999
Q ss_pred cccccCCCCCccchhHHHHHHHHHHhC-CCCc---HHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCH
Q 001548 501 PEELSGGVCTTSSNIYSLGVLFFELFG-RFDS---ERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT 576 (1056)
Q Consensus 501 PE~l~~~~~t~~sDIwSLGvlL~eLlt-~f~~---~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~ 576 (1056)
||.+.+..++.++|||||||++|||++ +..+ ..........+.....++.....++.+.+|+.+||.++|.+|||+
T Consensus 212 PE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~ 291 (302)
T cd05055 212 PESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTF 291 (302)
T ss_pred HhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCH
Confidence 999999999999999999999999997 5322 221222222222222233334557889999999999999999999
Q ss_pred HHHhhh
Q 001548 577 REILQS 582 (1056)
Q Consensus 577 ~eil~~ 582 (1056)
.++++.
T Consensus 292 ~ell~~ 297 (302)
T cd05055 292 KQIVQL 297 (302)
T ss_pred HHHHHH
Confidence 999863
No 300
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.94 E-value=4.7e-26 Score=276.07 Aligned_cols=185 Identities=17% Similarity=0.143 Sum_probs=131.2
Q ss_pred CcccccCCCCCHHHHHHhcCCC-------------------CCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEcc
Q 001548 304 LRQGSSDHGVNLREWLNARGHK-------------------GKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ 364 (1056)
Q Consensus 304 ~~~~~~~~GgsL~~~l~~~~~~-------------------~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~ 364 (1056)
..+++|+.+++|.+++...... .....+..++.||+.||.|||++||+||||||+|||++.
T Consensus 211 ~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~ 290 (566)
T PLN03225 211 WLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSE 290 (566)
T ss_pred EEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeC
Confidence 3588999999999999654321 122346789999999999999999999999999999986
Q ss_pred -CCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCccccccc
Q 001548 365 -SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANE 443 (1056)
Q Consensus 365 -~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (1056)
++.+||+|||+++.+.....
T Consensus 291 ~~~~~KL~DFGlA~~l~~~~~----------------------------------------------------------- 311 (566)
T PLN03225 291 GSGSFKIIDLGAAADLRVGIN----------------------------------------------------------- 311 (566)
T ss_pred CCCcEEEEeCCCccccccccc-----------------------------------------------------------
Confidence 57899999999976431000
Q ss_pred ccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCC----------------
Q 001548 444 SDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG---------------- 507 (1056)
Q Consensus 444 ~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~---------------- 507 (1056)
......++|+.|+|||.+...
T Consensus 312 -------------------------------------------~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~s 348 (566)
T PLN03225 312 -------------------------------------------YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALS 348 (566)
T ss_pred -------------------------------------------cCCcccccCCCccChHHhhccCCCCCCcccccccccc
Confidence 000145678889999976432
Q ss_pred ------CCCccchhHHHHHHHHHHhCC-CCcHHHHHHHHHhhccCC---------CCCCC-----------CCCChhHHH
Q 001548 508 ------VCTTSSNIYSLGVLFFELFGR-FDSERALAAAMSDLRDRI---------LPPSF-----------LSENPKEAG 560 (1056)
Q Consensus 508 ------~~t~~sDIwSLGvlL~eLlt~-f~~~~~~~~~~~~~~~~~---------lp~~~-----------~~~~~~~~~ 560 (1056)
.++.++|||||||+||||+++ +............+.... .++.. ........+
T Consensus 349 p~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~d 428 (566)
T PLN03225 349 PVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWE 428 (566)
T ss_pred chhccccCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHH
Confidence 234567999999999999986 444433333332222110 01110 011223458
Q ss_pred HHHhccccCCCCCCCHHHHhhhhhhhhhhh
Q 001548 561 FCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1056)
Q Consensus 561 li~~lL~~dP~~Rpt~~eil~~~~~~~~~~ 590 (1056)
||.+||++||.+|||+.++|+||||.....
T Consensus 429 Li~~mL~~dP~kR~ta~e~L~Hpff~~~~~ 458 (566)
T PLN03225 429 LLKSMMRFKGRQRISAKAALAHPYFDREGL 458 (566)
T ss_pred HHHHHccCCcccCCCHHHHhCCcCcCCCCc
Confidence 999999999999999999999999987544
No 301
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.94 E-value=2.9e-26 Score=253.03 Aligned_cols=208 Identities=16% Similarity=0.149 Sum_probs=151.1
Q ss_pred hhhccC-CCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHH
Q 001548 264 MMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR---GHKGKRIECLYIFRQIV 339 (1056)
Q Consensus 264 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~---~~~~~~~~~~~i~~QIl 339 (1056)
.++... .|||++.+........... .... -..+|+|++|++|.+++... +..+++..++.++.||+
T Consensus 54 ~~l~~~~~h~~i~~~~~~~~~~~~~~---~~~~-------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~ 123 (275)
T cd06608 54 NILRKYSNHPNIATFYGAFIKKNPPG---NDDQ-------LWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETL 123 (275)
T ss_pred HHHHHhcCCCChheEEEEEEecCCCC---cceE-------EEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHH
Confidence 344444 6999998766644332210 0000 12489999999999998653 35678889999999999
Q ss_pred HHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccc
Q 001548 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (1056)
Q Consensus 340 ~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 419 (1056)
.||.|||++||+|+||+|+||+++.++.+|++|||++.......
T Consensus 124 ~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~------------------------------------ 167 (275)
T cd06608 124 RGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTL------------------------------------ 167 (275)
T ss_pred HHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccceecccch------------------------------------
Confidence 99999999999999999999999999999999999886543100
Q ss_pred cccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCcc
Q 001548 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (1056)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 499 (1056)
.......|+..|+
T Consensus 168 -------------------------------------------------------------------~~~~~~~~~~~y~ 180 (275)
T cd06608 168 -------------------------------------------------------------------GRRNTFIGTPYWM 180 (275)
T ss_pred -------------------------------------------------------------------hhhcCcccccccc
Confidence 0001345788899
Q ss_pred CcccccC-----CCCCccchhHHHHHHHHHHhCCCCc---HHHHHHHHHhhccCCCCCC--CCCCChhHHHHHHhccccC
Q 001548 500 SPEELSG-----GVCTTSSNIYSLGVLFFELFGRFDS---ERALAAAMSDLRDRILPPS--FLSENPKEAGFCLWQLHPE 569 (1056)
Q Consensus 500 APE~l~~-----~~~t~~sDIwSLGvlL~eLlt~f~~---~~~~~~~~~~~~~~~lp~~--~~~~~~~~~~li~~lL~~d 569 (1056)
|||++.. ..++.++|||||||+||+|+++..+ .............. .+.. ....+..+.+|+.+||.+|
T Consensus 181 aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~d 259 (275)
T cd06608 181 APEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNP-PPTLKSPENWSKKFNDFISECLIKN 259 (275)
T ss_pred CHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccC-CCCCCchhhcCHHHHHHHHHHhhcC
Confidence 9998864 3468899999999999999986333 22222223222221 1111 1124567889999999999
Q ss_pred CCCCCCHHHHhhhhhh
Q 001548 570 PLSRPTTREILQSEVT 585 (1056)
Q Consensus 570 P~~Rpt~~eil~~~~~ 585 (1056)
|.+|||+.++++|||+
T Consensus 260 p~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 260 YEQRPFMEELLEHPFI 275 (275)
T ss_pred hhhCcCHHHHhcCCCC
Confidence 9999999999999996
No 302
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.94 E-value=6.2e-26 Score=250.05 Aligned_cols=246 Identities=15% Similarity=0.144 Sum_probs=168.6
Q ss_pred hhHHHhhhcc--ccceeeeCCCC-CccccccccccccccccccC-C-chhHHHHhhhhhhccCCCCCCCcccceeeecCC
Q 001548 212 SEFFVKTTLK--GKGIVCRGPPL-NAFKERRGMIDTKAFVTTTM-P-SDAALKAAGAMMVASNASPKPVGVGTAVVSNGS 286 (1056)
Q Consensus 212 ~~~~~k~~~~--g~Gvv~~g~~~-~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1056)
.+|-+.+.++ +.|.||++... ++..+ ..+....... . .....-.....++....|||++.+......+..
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~-----~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPV-----ALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceE-----EEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCe
Confidence 4566666555 67999999842 11111 1111111000 0 011111223456777789999976554322111
Q ss_pred CCCCcCCCCCcccccCCCcccccCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEc
Q 001548 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL 363 (1056)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~ 363 (1056)
-...|++++|++|.++++. ....+++..++.++.||+.||.|||++||+|+||||+||+++
T Consensus 77 ----------------~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~ 140 (267)
T cd08229 77 ----------------LNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT 140 (267)
T ss_pred ----------------EEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc
Confidence 1248999999999999864 234577778999999999999999999999999999999999
Q ss_pred cCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCccccccc
Q 001548 364 QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANE 443 (1056)
Q Consensus 364 ~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (1056)
.++.++++|||++.......
T Consensus 141 ~~~~~~l~dfg~~~~~~~~~------------------------------------------------------------ 160 (267)
T cd08229 141 ATGVVKLGDLGLGRFFSSKT------------------------------------------------------------ 160 (267)
T ss_pred CCCCEEECcchhhhccccCC------------------------------------------------------------
Confidence 99999999999876543100
Q ss_pred ccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHH
Q 001548 444 SDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFF 523 (1056)
Q Consensus 444 ~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~ 523 (1056)
.......|+..|+|||.+.+..++.++|||||||++|
T Consensus 161 -------------------------------------------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~ 197 (267)
T cd08229 161 -------------------------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLY 197 (267)
T ss_pred -------------------------------------------cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHH
Confidence 0001345788899999999888999999999999999
Q ss_pred HHhCCCCcH----HHHHHHHHhhccCCCCCCC-CCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001548 524 ELFGRFDSE----RALAAAMSDLRDRILPPSF-LSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1056)
Q Consensus 524 eLlt~f~~~----~~~~~~~~~~~~~~lp~~~-~~~~~~~~~li~~lL~~dP~~Rpt~~eil~ 581 (1056)
+|+++..++ .........+.....++.. ...++.+.+|+.+||+.||.+|||+.+|++
T Consensus 198 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 198 EMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred HHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 999863332 1122222333333333322 245678999999999999999999998876
No 303
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.93 E-value=5e-26 Score=252.82 Aligned_cols=203 Identities=13% Similarity=0.123 Sum_probs=148.2
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCC------CCCHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH------KGKRIECLYIFR 336 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~------~~~~~~~~~i~~ 336 (1056)
...++...|+|++.+......... ...+|++++|++|.+++...+. .++...++.++.
T Consensus 60 ~~~l~~l~~~~i~~~~~~~~~~~~----------------~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~ 123 (277)
T cd05036 60 ALIMSKFNHQNIVRLIGVSFERLP----------------RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCAR 123 (277)
T ss_pred HHHHHhCCCCCEeeEEEEEccCCC----------------cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHH
Confidence 456778899999976654322111 1248999999999999976542 467778999999
Q ss_pred HHHHHHHHhhhcCcccccCCCCCEEEccCC---cEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccc
Q 001548 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSN---QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (1056)
Q Consensus 337 QIl~gL~ylHs~gIvHrDLKP~NILl~~~~---~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 413 (1056)
||+.||.|||++||+||||||+||+++.++ .+|++|||+++.+......
T Consensus 124 qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~---------------------------- 175 (277)
T cd05036 124 DVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYY---------------------------- 175 (277)
T ss_pred HHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccce----------------------------
Confidence 999999999999999999999999998765 5999999998765310000
Q ss_pred cccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccc
Q 001548 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (1056)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (1056)
.......
T Consensus 176 -------------------------------------------------------------------------~~~~~~~ 182 (277)
T cd05036 176 -------------------------------------------------------------------------RKGGRAM 182 (277)
T ss_pred -------------------------------------------------------------------------ecCCCCC
Confidence 0000112
Q ss_pred cCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccC
Q 001548 494 EEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPE 569 (1056)
Q Consensus 494 gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~d 569 (1056)
.+..|+|||++.+..++.++|||||||++|||++ + |........ +..+.....++.....++.+.+|+.+||+++
T Consensus 183 ~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~ 261 (277)
T cd05036 183 LPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEV-MEFVTGGGRLDPPKGCPGPVYRIMTDCWQHT 261 (277)
T ss_pred ccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHHcCCcCCCCCCCCHHHHHHHHHHcCCC
Confidence 3456999999998899999999999999999996 4 433222221 2222222122223455788899999999999
Q ss_pred CCCCCCHHHHhhhh
Q 001548 570 PLSRPTTREILQSE 583 (1056)
Q Consensus 570 P~~Rpt~~eil~~~ 583 (1056)
|++||++.++++|.
T Consensus 262 p~~Rps~~~vl~~l 275 (277)
T cd05036 262 PEDRPNFATILERI 275 (277)
T ss_pred cccCcCHHHHHHHh
Confidence 99999999999863
No 304
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.93 E-value=4.5e-26 Score=257.02 Aligned_cols=224 Identities=15% Similarity=0.123 Sum_probs=158.2
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+......+... .++||+++|++|.++|+..+ .+++..+..++.||+.||
T Consensus 52 ~~~l~~~~~~~i~~~~~~~~~~~~~----------------~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l 114 (305)
T cd05609 52 RDILTFAENPFVVSMFCSFETKRHL----------------CMVMEYVEGGDCATLLKNIG-ALPVDMARMYFAETVLAL 114 (305)
T ss_pred HHHHHhCCCCCeeeeEEEEecCCEE----------------EEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHH
Confidence 3466777899998765443211111 24899999999999997765 467778999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+||+++.++.+|++|||+++....+... . ..
T Consensus 115 ~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~---~---------~~---------------------- 160 (305)
T cd05609 115 EYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTT---N---------LY---------------------- 160 (305)
T ss_pred HHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccc---c---------cc----------------------
Confidence 9999999999999999999999999999999988642210000 0 00
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
+.. ... ...........|+..|+|||
T Consensus 161 -------------------------~~~--------~~~---------------------~~~~~~~~~~~~~~~y~aPE 186 (305)
T cd05609 161 -------------------------EGH--------IEK---------------------DTREFLDKQVCGTPEYIAPE 186 (305)
T ss_pred -------------------------ccc--------ccc---------------------chhhccccCCccCccccCch
Confidence 000 000 00000011346788899999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccC--CCCCCCCCCChhHHHHHHhccccCCCCCCC--
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDR--ILPPSFLSENPKEAGFCLWQLHPEPLSRPT-- 575 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~--~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt-- 575 (1056)
.+.+..++.++|||||||++|||+++ |.+.... ......... ..|......++.+.+|+.+||++||.+||+
T Consensus 187 ~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~ 265 (305)
T cd05609 187 VILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE-ELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTG 265 (305)
T ss_pred hccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCcc
Confidence 99988899999999999999999986 4332222 222222222 223333356788899999999999999998
Q ss_pred -HHHHhhhhhhhhhhhhc
Q 001548 576 -TREILQSEVTNEFQEVC 592 (1056)
Q Consensus 576 -~~eil~~~~~~~~~~~~ 592 (1056)
+.++|+||||.......
T Consensus 266 ~~~~ll~~~~~~~~~~~~ 283 (305)
T cd05609 266 GAFEVKQHRFFLGLDWNG 283 (305)
T ss_pred CHHHHHhCccccCCCHHH
Confidence 79999999997754433
No 305
>PTZ00421 coronin; Provisional
Probab=99.93 E-value=5.6e-24 Score=252.13 Aligned_cols=255 Identities=16% Similarity=0.191 Sum_probs=192.7
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCC-----CC-CcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001548 780 NVICSISFDRDEDHFAAAGVSKKIKIFEFNALF-----ND-SVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1056)
Q Consensus 780 ~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~-----~~-~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V 853 (1056)
..|....+++++..+++++.+..+..|+..... .. ......+....+|.+.|.+++|+|..+++|++|+.|++|
T Consensus 21 ~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtI 100 (493)
T PTZ00421 21 LNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGTI 100 (493)
T ss_pred eccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEE
Confidence 344555566666666777777777777643210 00 000111234568999999999999547899999999999
Q ss_pred EEEEcCCC-------ceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCC
Q 001548 854 KLWDACTG-------QTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHS 925 (1056)
Q Consensus 854 ~lWD~~t~-------~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~ 925 (1056)
++||+.++ .++..+.+|...|.+++|+|....+|+||+.|++|+|||+++++.+..+. |...|.+++|+|++
T Consensus 101 kIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG 180 (493)
T PTZ00421 101 MGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDG 180 (493)
T ss_pred EEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCC
Confidence 99999765 35778899999999999999545799999999999999999999888886 66789999999999
Q ss_pred CcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCC-eEEEEEc-CCCEEEEEE----CCCeEEEEECCCCCCCCCCCCcee
Q 001548 926 SHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKA-VSYVKFL-DSGTLVTAS----TDNKLKLWDLKRTSHTGPSTNACS 999 (1056)
Q Consensus 926 ~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~-V~~l~fs-~~~~L~SgS----~Dg~IkiWdl~~~~~~~~~~~~~~ 999 (1056)
. +|++|+.|++|++||+|+.+. +..+.+|... +..+.|. +++.|++++ .|++|++||+++.. .++
T Consensus 181 ~-lLatgs~Dg~IrIwD~rsg~~-v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~-------~p~ 251 (493)
T PTZ00421 181 S-LLCTTSKDKKLNIIDPRDGTI-VSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMA-------SPY 251 (493)
T ss_pred C-EEEEecCCCEEEEEECCCCcE-EEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCC-------Cce
Confidence 6 899999999999999999875 6778888765 4466777 556677654 48999999998422 233
Q ss_pred EEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEE-cCCcEEEEeCCCCeEEE
Q 001548 1000 LTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVC-FDFTTLSFRTSWGCLLL 1053 (1056)
Q Consensus 1000 ~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s-~D~~v~iW~v~~~~~~~ 1053 (1056)
.....|....+. ...+++++..|+++| .|++|++|++..+.++.
T Consensus 252 ~~~~~d~~~~~~----------~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~ 296 (493)
T PTZ00421 252 STVDLDQSSALF----------IPFFDEDTNLLYIGSKGEGNIRCFELMNERLTF 296 (493)
T ss_pred eEeccCCCCceE----------EEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEE
Confidence 333333322221 234889999999888 59999999999887654
No 306
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.93 E-value=6.8e-27 Score=265.48 Aligned_cols=237 Identities=17% Similarity=0.167 Sum_probs=168.5
Q ss_pred hccccceeeeCCCCCccccccccccccccccccC--CchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCC
Q 001548 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1056)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1056)
..+-+|.||||... +.++.+...-... ..-++.|.. ++.++.-+|.||+-+....- ..+
T Consensus 401 GsGsFGtV~Rg~wh-------GdVAVK~Lnv~~pt~~qlqaFKnE-Va~lkkTRH~NIlLFMG~~~-----------~p~ 461 (678)
T KOG0193|consen 401 GSGSFGTVYRGRWH-------GDVAVKLLNVDDPTPEQLQAFKNE-VAVLKKTRHENILLFMGACM-----------NPP 461 (678)
T ss_pred ccccccceeecccc-------cceEEEEEecCCCCHHHHHHHHHH-HHHHhhcchhhheeeehhhc-----------CCc
Confidence 44567999999994 3333333322222 222233333 77788889999997655522 111
Q ss_pred cccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchh
Q 001548 297 ASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1056)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla 376 (1056)
. -++..+|+|-+|..+|.-...+++....+.|++||+.|++|||.++|||||||..||+|..++.|||+||||+
T Consensus 462 ~------AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLa 535 (678)
T KOG0193|consen 462 L------AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLA 535 (678)
T ss_pred e------eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccce
Confidence 1 1366789999999999777778899899999999999999999999999999999999999999999999998
Q ss_pred hcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCC
Q 001548 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1056)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~ 456 (1056)
....- +.+. .
T Consensus 536 tvk~~-----------------------------------w~g~---------------~-------------------- 545 (678)
T KOG0193|consen 536 TVKTR-----------------------------------WSGE---------------Q-------------------- 545 (678)
T ss_pred eeeee-----------------------------------eccc---------------c--------------------
Confidence 55320 0000 0
Q ss_pred CcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccC---CCCCccchhHHHHHHHHHHhCC---CC
Q 001548 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG---GVCTTSSNIYSLGVLFFELFGR---FD 530 (1056)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~---~~~t~~sDIwSLGvlL~eLlt~---f~ 530 (1056)
.+-..-|..-|||||+++. .+|++.+|||||||++|||+|+ |.
T Consensus 546 -------------------------------q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys 594 (678)
T KOG0193|consen 546 -------------------------------QLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS 594 (678)
T ss_pred -------------------------------ccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC
Confidence 0002235556999999986 5699999999999999999996 44
Q ss_pred cHHHHHHHHHhhccCCCCCCC---CCCCh-hHHHHHHhccccCCCCCCCHHHHhhh
Q 001548 531 SERALAAAMSDLRDRILPPSF---LSENP-KEAGFCLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 531 ~~~~~~~~~~~~~~~~lp~~~---~~~~~-~~~~li~~lL~~dP~~Rpt~~eil~~ 582 (1056)
........+..-++ .+-+.. ....| ++++|+..||.++|++||.+.+||..
T Consensus 595 i~~~dqIifmVGrG-~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~ 649 (678)
T KOG0193|consen 595 IQNRDQIIFMVGRG-YLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSK 649 (678)
T ss_pred CCChhheEEEeccc-ccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHH
Confidence 32222222333333 222222 23334 78899999999999999999999883
No 307
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.93 E-value=1e-25 Score=245.77 Aligned_cols=238 Identities=13% Similarity=0.105 Sum_probs=166.6
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCCchhHH-HHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcc
Q 001548 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAAL-KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1056)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1056)
.+|.|.||+|...++..+ ..+......+..... -......+....|||++.+.........
T Consensus 5 ~g~~g~vy~~~~~~~~~~------a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~------------ 66 (250)
T cd05085 5 KGNFGEVFKGTLKDKTPV------AVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQP------------ 66 (250)
T ss_pred CCCCceEEEEEecCCcEE------EEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCc------------
Confidence 478899999976433222 111122222222111 1122346677789999986655332111
Q ss_pred cccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhc
Q 001548 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1056)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~ 378 (1056)
...+||+++|++|.+++......+++..++.++.||+.||.|+|++|++||||||+||+++.++.+|++|||+++.
T Consensus 67 ----~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~ 142 (250)
T cd05085 67 ----IYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQ 142 (250)
T ss_pred ----cEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCcccee
Confidence 1248999999999999977666678889999999999999999999999999999999999999999999998864
Q ss_pred ccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCc
Q 001548 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1056)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~ 458 (1056)
.......
T Consensus 143 ~~~~~~~------------------------------------------------------------------------- 149 (250)
T cd05085 143 EDDGIYS------------------------------------------------------------------------- 149 (250)
T ss_pred ccccccc-------------------------------------------------------------------------
Confidence 3210000
Q ss_pred ccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHH
Q 001548 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERA 534 (1056)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~ 534 (1056)
......++..|+|||++.+..++.++|||||||++|+|++ + |.....
T Consensus 150 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~ 200 (250)
T cd05085 150 -----------------------------SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTN 200 (250)
T ss_pred -----------------------------cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH
Confidence 0001123456999999998889999999999999999997 4 433322
Q ss_pred HHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001548 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 535 ~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~ 582 (1056)
. .....+.....+......++.+.+|+.+||..+|.+||++.++++.
T Consensus 201 ~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 247 (250)
T cd05085 201 Q-QAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKE 247 (250)
T ss_pred H-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 2 2222233333333344567889999999999999999999999864
No 308
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.93 E-value=6.7e-26 Score=248.19 Aligned_cols=205 Identities=20% Similarity=0.270 Sum_probs=160.1
Q ss_pred hhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHH
Q 001548 261 AGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIV 339 (1056)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~QIl 339 (1056)
.....++...|+||+.+......+..+ ..+|+|++|++|.+++... +..++...+..++.|++
T Consensus 48 ~e~~~l~~~~h~~i~~~~~~~~~~~~~----------------~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~ 111 (256)
T cd08221 48 NEIVILSLLQHPNIIAYYNHFMDDNTL----------------LIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIV 111 (256)
T ss_pred HHHHHHHhCCCCCeeEEEeEEecCCeE----------------EEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHH
Confidence 335577888999999876664432211 2378999999999999765 45678889999999999
Q ss_pred HHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccc
Q 001548 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (1056)
Q Consensus 340 ~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 419 (1056)
.||.|||++||+|+||||+||+++.++.+|++|||+++......
T Consensus 112 ~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~------------------------------------ 155 (256)
T cd08221 112 SAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY------------------------------------ 155 (256)
T ss_pred HHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccc------------------------------------
Confidence 99999999999999999999999999999999999886543100
Q ss_pred cccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCcc
Q 001548 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (1056)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 499 (1056)
.......|++.|+
T Consensus 156 -------------------------------------------------------------------~~~~~~~~~~~y~ 168 (256)
T cd08221 156 -------------------------------------------------------------------SMAETVVGTPYYM 168 (256)
T ss_pred -------------------------------------------------------------------ccccccCCCcccc
Confidence 0001346788999
Q ss_pred CcccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCH
Q 001548 500 SPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT 576 (1056)
Q Consensus 500 APE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~ 576 (1056)
|||.+.+..++.++|||||||++|||+++ |...... .....+..+.+++.....+.++.+++.+||+++|.+||++
T Consensus 169 ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~ 247 (256)
T cd08221 169 SPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL-NLVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTA 247 (256)
T ss_pred CHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHcCCCCCCccccCHHHHHHHHHHcccCcccCCCH
Confidence 99999988889999999999999999986 3332222 2222333344444445667889999999999999999999
Q ss_pred HHHhhhhhh
Q 001548 577 REILQSEVT 585 (1056)
Q Consensus 577 ~eil~~~~~ 585 (1056)
.++++|+|+
T Consensus 248 ~~ll~~~~l 256 (256)
T cd08221 248 DEVLDQPLL 256 (256)
T ss_pred HHHhhCcCC
Confidence 999999985
No 309
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.93 E-value=4.2e-26 Score=252.99 Aligned_cols=178 Identities=19% Similarity=0.235 Sum_probs=139.2
Q ss_pred cccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhccccccc
Q 001548 305 RQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESAS 384 (1056)
Q Consensus 305 ~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~ 384 (1056)
.+|++++|++|.++++.. .+++..++.++.||+.||.|||+.||+|+||+|+||+++.++.++++|||++.......
T Consensus 79 lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06917 79 IIMEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS- 155 (277)
T ss_pred EEEecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc-
Confidence 489999999999998654 57788999999999999999999999999999999999999999999999886644100
Q ss_pred CCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCccccccc
Q 001548 385 LDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTN 464 (1056)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~ 464 (1056)
T Consensus 156 -------------------------------------------------------------------------------- 155 (277)
T cd06917 156 -------------------------------------------------------------------------------- 155 (277)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCCccccccccccccccccccCCCccCcccccC-CCCCccchhHHHHHHHHHHhCCCCc---HHHHHHHHH
Q 001548 465 AGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDS---ERALAAAMS 540 (1056)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~t~~sDIwSLGvlL~eLlt~f~~---~~~~~~~~~ 540 (1056)
.......|+..|+|||.+.+ ..++.++|+|||||++|+|++|..+ ....... .
T Consensus 156 ----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~-~ 212 (277)
T cd06917 156 ----------------------SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAM-M 212 (277)
T ss_pred ----------------------cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhh-h
Confidence 00013467888999999875 4478999999999999999986333 2222211 1
Q ss_pred hhccCCCCCCCC--CCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001548 541 DLRDRILPPSFL--SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1056)
Q Consensus 541 ~~~~~~lp~~~~--~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~ 589 (1056)
.+... .++... ..++.+.+|+.+||+.||.+||++.+++.|+||....
T Consensus 213 ~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 213 LIPKS-KPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred ccccC-CCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 22222 222222 2567889999999999999999999999999997754
No 310
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=2.5e-26 Score=281.23 Aligned_cols=241 Identities=18% Similarity=0.204 Sum_probs=183.2
Q ss_pred ccceeeeCCCCCccccccccccccccccccCCchhHH--HHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCccc
Q 001548 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAAL--KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1056)
Q Consensus 222 g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1056)
-+|+||+|...+..-. -..++...|...+....+.. --...-+|..-.||||++++.+.....++.
T Consensus 704 ~FG~VY~g~~~~~~~~-~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~----------- 771 (1025)
T KOG1095|consen 704 AFGEVYEGTYSDVPGS-VSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL----------- 771 (1025)
T ss_pred cccceEEEEEecCCCC-ccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE-----------
Confidence 4599999987543332 22444544444445333322 233345688889999999888855433333
Q ss_pred ccCCCcccccCCCCCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCc
Q 001548 300 WIGGLRQGSSDHGVNLREWLNAR------GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGP 373 (1056)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~------~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Df 373 (1056)
+++||++||+|+.||++. ...+...+...|+.||+.|+.||+++++|||||-..|+||+....|||+||
T Consensus 772 -----i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 772 -----ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred -----EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEccc
Confidence 489999999999999887 667888899999999999999999999999999999999999999999999
Q ss_pred chhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCC
Q 001548 374 IIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPH 453 (1056)
Q Consensus 374 gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~ 453 (1056)
|+||++...+.. +++|
T Consensus 847 GlArDiy~~~yy----------------------------------------------r~~~------------------ 862 (1025)
T KOG1095|consen 847 GLARDIYDKDYY----------------------------------------------RKHG------------------ 862 (1025)
T ss_pred chhHhhhhchhe----------------------------------------------eccC------------------
Confidence 999976521110 0000
Q ss_pred CCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC----CC
Q 001548 454 SHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG----RF 529 (1056)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt----~f 529 (1056)
...--..|||||.+..+.++.++|||||||+|||+|+ ||
T Consensus 863 -------------------------------------~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY 905 (1025)
T KOG1095|consen 863 -------------------------------------EAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPY 905 (1025)
T ss_pred -------------------------------------ccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCC
Confidence 0011124999999999999999999999999999996 46
Q ss_pred CcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001548 530 DSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1056)
Q Consensus 530 ~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~ 581 (1056)
+...+...+...++.+.++ ....++.++.++|+.||+.+|..||+++.|++
T Consensus 906 ~~~~n~~v~~~~~~ggRL~-~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 906 PSRSNFEVLLDVLEGGRLD-PPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred CCcchHHHHHHHHhCCccC-CCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 6666666665566666444 34566778889999999999999999999988
No 311
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.93 E-value=6e-26 Score=253.93 Aligned_cols=201 Identities=17% Similarity=0.139 Sum_probs=148.6
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC-------------------
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG------------------- 323 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~------------------- 323 (1056)
...+....||||+.+......+.. ...+++|+.|++|.+++....
T Consensus 54 ~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 117 (290)
T cd05045 54 FNLLKQVNHPHVIKLYGACSQDGP----------------LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLD 117 (290)
T ss_pred HHHHhhCCCCCEeeEEEEEecCCC----------------cEEEEEecCCCCHHHHHHhcCCcccccccccccccccccc
Confidence 446777899999876554332211 123899999999999986421
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcc
Q 001548 324 ----HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRS 399 (1056)
Q Consensus 324 ----~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~ 399 (1056)
..++...++.++.||+.||.|||++||+||||||+|||++.++.+|++|||+++........
T Consensus 118 ~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~-------------- 183 (290)
T cd05045 118 NPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSY-------------- 183 (290)
T ss_pred CccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCccch--------------
Confidence 23567788999999999999999999999999999999999999999999998764310000
Q ss_pred cccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccc
Q 001548 400 AEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVS 479 (1056)
Q Consensus 400 ~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (1056)
T Consensus 184 -------------------------------------------------------------------------------- 183 (290)
T cd05045 184 -------------------------------------------------------------------------------- 183 (290)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCC
Q 001548 480 NTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSEN 555 (1056)
Q Consensus 480 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~ 555 (1056)
.......++..|+|||.+.+..++.++|||||||++|||++ + |.+... ......+.....++.....+
T Consensus 184 -------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~ 255 (290)
T cd05045 184 -------VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP-ERLFNLLKTGYRMERPENCS 255 (290)
T ss_pred -------hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH-HHHHHHHhCCCCCCCCCCCC
Confidence 00001234557999999988889999999999999999997 4 333221 22222333322233344567
Q ss_pred hhHHHHHHhccccCCCCCCCHHHHhh
Q 001548 556 PKEAGFCLWQLHPEPLSRPTTREILQ 581 (1056)
Q Consensus 556 ~~~~~li~~lL~~dP~~Rpt~~eil~ 581 (1056)
..+.+|+.+||+++|.+||++.+++.
T Consensus 256 ~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 256 EEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHHH
Confidence 88999999999999999999999976
No 312
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.93 E-value=6.3e-26 Score=260.46 Aligned_cols=156 Identities=18% Similarity=0.209 Sum_probs=117.1
Q ss_pred CCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccc
Q 001548 326 GKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMF 405 (1056)
Q Consensus 326 ~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (1056)
++...+..++.||+.||.|||++||+||||||+|||++.++.+|++|||+++........
T Consensus 176 ~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-------------------- 235 (343)
T cd05103 176 LTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY-------------------- 235 (343)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcch--------------------
Confidence 456677889999999999999999999999999999999999999999998764310000
Q ss_pred cccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccc
Q 001548 406 TTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQ 485 (1056)
Q Consensus 406 ~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (1056)
T Consensus 236 -------------------------------------------------------------------------------- 235 (343)
T cd05103 236 -------------------------------------------------------------------------------- 235 (343)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHH
Q 001548 486 STSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGF 561 (1056)
Q Consensus 486 ~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~l 561 (1056)
.......++..|+|||++.+..++.++|||||||++|||++ + |............+.....++.....++++.++
T Consensus 236 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (343)
T cd05103 236 -VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 314 (343)
T ss_pred -hhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHH
Confidence 00001234566999999998899999999999999999986 4 322221122222333332233333457789999
Q ss_pred HHhccccCCCCCCCHHHHhhh
Q 001548 562 CLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 562 i~~lL~~dP~~Rpt~~eil~~ 582 (1056)
+.+||++||.+||++.+|++|
T Consensus 315 ~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 315 MLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred HHHHccCChhhCcCHHHHHHH
Confidence 999999999999999999986
No 313
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.93 E-value=5e-26 Score=249.80 Aligned_cols=206 Identities=24% Similarity=0.214 Sum_probs=159.2
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+...+|||++.+......+.. ...++++++|++|.+++... ..+++..++.++.||+.||
T Consensus 50 ~~~l~~l~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l 112 (264)
T cd06623 50 LKTLRSCESPYVVKCYGAFYKEGE----------------ISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGL 112 (264)
T ss_pred HHHHHhcCCCCeeeEEEEEccCCe----------------EEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHH
Confidence 445666779999876655332211 12388999999999999776 4577779999999999999
Q ss_pred HHhhh-cCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 343 DYHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 343 ~ylHs-~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
.|||+ +|++|+||+|+||+++.++.++++|||+++......
T Consensus 113 ~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~-------------------------------------- 154 (264)
T cd06623 113 DYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL-------------------------------------- 154 (264)
T ss_pred HHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCC--------------------------------------
Confidence 99999 999999999999999999999999999876543100
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
.......++..|+||
T Consensus 155 -----------------------------------------------------------------~~~~~~~~~~~y~~p 169 (264)
T cd06623 155 -----------------------------------------------------------------DQCNTFVGTVTYMSP 169 (264)
T ss_pred -----------------------------------------------------------------CcccceeecccccCH
Confidence 000134577889999
Q ss_pred ccccCCCCCccchhHHHHHHHHHHhCCCCcH---H--HHHHHHHhhccCCCCCCCCC-CChhHHHHHHhccccCCCCCCC
Q 001548 502 EELSGGVCTTSSNIYSLGVLFFELFGRFDSE---R--ALAAAMSDLRDRILPPSFLS-ENPKEAGFCLWQLHPEPLSRPT 575 (1056)
Q Consensus 502 E~l~~~~~t~~sDIwSLGvlL~eLlt~f~~~---~--~~~~~~~~~~~~~lp~~~~~-~~~~~~~li~~lL~~dP~~Rpt 575 (1056)
|.+.+..++.++|+|||||++|+|+++..+. . ........+.....++.... .+..+.+++.+||+++|..||+
T Consensus 170 E~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~ 249 (264)
T cd06623 170 ERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPS 249 (264)
T ss_pred hhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCC
Confidence 9999988999999999999999999873332 1 22233334344444444444 6788999999999999999999
Q ss_pred HHHHhhhhhhhhh
Q 001548 576 TREILQSEVTNEF 588 (1056)
Q Consensus 576 ~~eil~~~~~~~~ 588 (1056)
+.++++||||...
T Consensus 250 ~~~ll~~~~~~~~ 262 (264)
T cd06623 250 AAELLQHPFIKKA 262 (264)
T ss_pred HHHHHhCHHHHhc
Confidence 9999999999754
No 314
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.93 E-value=4e-26 Score=250.88 Aligned_cols=234 Identities=16% Similarity=0.096 Sum_probs=162.9
Q ss_pred cccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccc
Q 001548 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1056)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1056)
+|.|.||++...++..+ ..+.........+ .. ......+....||+++.+......+ .
T Consensus 17 g~~~~v~~~~~~~~~~~-----~~k~~~~~~~~~~-~~-~~E~~~l~~l~~~~i~~~~~~~~~~---------~------ 74 (260)
T cd05070 17 GQFGEVWMGTWNGNTKV-----AVKTLKPGTMSPE-SF-LEEAQIMKKLRHDKLVQLYAVVSEE---------P------ 74 (260)
T ss_pred ccCceEEEEEecCCcee-----EEEEecCCCCCHH-HH-HHHHHHHHhcCCCceEEEEeEECCC---------C------
Confidence 47899999875432222 1111111111111 11 1223467778899988765432100 0
Q ss_pred cCCCcccccCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcc
Q 001548 301 IGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1056)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~ 379 (1056)
...+|+++.|++|.+++... ...++...++.++.||+.||.|||++||+||||||+||+++.++.+|++|||++...
T Consensus 75 --~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~ 152 (260)
T cd05070 75 --IYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLI 152 (260)
T ss_pred --cEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeec
Confidence 12489999999999999653 345788899999999999999999999999999999999999999999999988654
Q ss_pred cccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcc
Q 001548 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1056)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~ 459 (1056)
.....
T Consensus 153 ~~~~~--------------------------------------------------------------------------- 157 (260)
T cd05070 153 EDNEY--------------------------------------------------------------------------- 157 (260)
T ss_pred cCccc---------------------------------------------------------------------------
Confidence 31000
Q ss_pred cccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHH
Q 001548 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERAL 535 (1056)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~ 535 (1056)
.......++..|+|||.+.+..++.++|||||||++|||++ + |......
T Consensus 158 ---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~ 210 (260)
T cd05070 158 ---------------------------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR 210 (260)
T ss_pred ---------------------------ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 00002234567999999988889999999999999999997 4 3332222
Q ss_pred HHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001548 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1056)
Q Consensus 536 ~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~ 581 (1056)
.....+.....++.....+..+.+|+.+||.++|.+|||+++++.
T Consensus 211 -~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 211 -EVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred -HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 222333333333444566788999999999999999999998874
No 315
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.93 E-value=1.1e-26 Score=265.55 Aligned_cols=206 Identities=21% Similarity=0.225 Sum_probs=168.0
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...|.+..|||||.+...-.....+. .+|||+.||.|+++|.+.++..+ .+++.+|.|++.||
T Consensus 106 v~imk~l~HPnIvkl~~v~~t~~~ly----------------lV~eya~~ge~~~yl~~~gr~~e-~~ar~~F~q~vsav 168 (596)
T KOG0586|consen 106 VDIMKSLNHPNIVKLFSVIETEATLY----------------LVMEYASGGELFDYLVKHGRMKE-KEARAKFRQIVSAV 168 (596)
T ss_pred HHHHHhcCCcceeeeeeeeeecceeE----------------EEEEeccCchhHHHHHhcccchh-hhhhhhhHHHHHHH
Confidence 45788899999998776655444443 28999999999999999988777 69999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
+|||+++|+|||||.+||||+.+..+||+|||++..+...
T Consensus 169 eYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~---------------------------------------- 208 (596)
T KOG0586|consen 169 EYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYG---------------------------------------- 208 (596)
T ss_pred HHHhhcceeccccchhhcccccccceeeeccccceeeccc----------------------------------------
Confidence 9999999999999999999999999999999998776510
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
..+.+.+|++.|+|||
T Consensus 209 ----------------------------------------------------------------~~lqt~cgsppyAaPE 224 (596)
T KOG0586|consen 209 ----------------------------------------------------------------LMLQTFCGSPPYAAPE 224 (596)
T ss_pred ----------------------------------------------------------------ccccccCCCCCccChH
Confidence 0122789999999999
Q ss_pred cccCCCC-CccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001548 503 ELSGGVC-TTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1056)
Q Consensus 503 ~l~~~~~-t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~e 578 (1056)
++.|..| ++.+|+||||++||.|++| |++..-...--..++....-|. ..+.++.++|.++|.++|++|++..+
T Consensus 225 l~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~--~ms~dce~lLrk~lvl~Pskr~~~dq 302 (596)
T KOG0586|consen 225 LFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPF--YMSCDCEDLLRKFLVLNPSKRGPCDQ 302 (596)
T ss_pred hhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccc--eeechhHHHHHHhhccCccccCCHHH
Confidence 9999877 7999999999999999986 6664332222233333322222 45778889999999999999999999
Q ss_pred Hhhhhhhhhhhhh
Q 001548 579 ILQSEVTNEFQEV 591 (1056)
Q Consensus 579 il~~~~~~~~~~~ 591 (1056)
|+.|.|++...+.
T Consensus 303 im~~~W~n~~~~~ 315 (596)
T KOG0586|consen 303 IMKDRWRNDLLEA 315 (596)
T ss_pred hhhhcccchhhhh
Confidence 9999999877655
No 316
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.93 E-value=3.5e-26 Score=254.54 Aligned_cols=203 Identities=17% Similarity=0.223 Sum_probs=150.5
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..+++...|||++.+......+... ..+|+|+++++|..++.... .+++..++.++.||+.||
T Consensus 51 ~~~l~~~~h~~i~~~~~~~~~~~~~----------------~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~ql~~~l 113 (286)
T cd07847 51 IRMLKQLKHPNLVNLIEVFRRKRKL----------------HLVFEYCDHTVLNELEKNPR-GVPEHLIKKIIWQTLQAV 113 (286)
T ss_pred HHHHHhCCCCCEeeeeeEEeeCCEE----------------EEEEeccCccHHHHHHhCCC-CCCHHHHHHHHHHHHHHH
Confidence 4567777899998866554322111 14899999999988876543 477879999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+|+||||+||+++.++.+||+|||++........
T Consensus 114 ~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-------------------------------------- 155 (286)
T cd07847 114 NFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD-------------------------------------- 155 (286)
T ss_pred HHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcc--------------------------------------
Confidence 999999999999999999999999999999998866431000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
......++.+|+|||
T Consensus 156 -----------------------------------------------------------------~~~~~~~~~~~~aPE 170 (286)
T cd07847 156 -----------------------------------------------------------------DYTDYVATRWYRAPE 170 (286)
T ss_pred -----------------------------------------------------------------cccCcccccccCCHH
Confidence 001335678899999
Q ss_pred cccC-CCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHH---Hhhcc-----------------CCCCC---------
Q 001548 503 ELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERALAAAM---SDLRD-----------------RILPP--------- 549 (1056)
Q Consensus 503 ~l~~-~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~---~~~~~-----------------~~lp~--------- 549 (1056)
.+.+ ..++.++|||||||++|||+++ |.+.......+ ..+.. ...|+
T Consensus 171 ~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (286)
T cd07847 171 LLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLES 250 (286)
T ss_pred HHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHH
Confidence 9876 5579999999999999999986 33222221111 11100 00110
Q ss_pred CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 550 ~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
.+...++.+.+|+.+||+++|++||++.|++.||||
T Consensus 251 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 251 KFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred HhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 123456778899999999999999999999999997
No 317
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.93 E-value=1.2e-25 Score=254.80 Aligned_cols=203 Identities=15% Similarity=0.170 Sum_probs=151.8
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...++...|||++.+......... ...+|+|+. ++|.+++......++..+++.++.||+.||
T Consensus 72 ~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al 134 (313)
T cd06633 72 VKFLQQLKHPNTIEYKGCYLKEHT----------------AWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGL 134 (313)
T ss_pred HHHHHhCCCCCCccEEEEEEeCCE----------------EEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 346777789999876655332211 124788886 578888877666788889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+|+||||+||+++.++.+|++|||++.....
T Consensus 135 ~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~----------------------------------------- 173 (313)
T cd06633 135 AYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP----------------------------------------- 173 (313)
T ss_pred HHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCC-----------------------------------------
Confidence 999999999999999999999999999999997643210
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.....|+..|+|||
T Consensus 174 ------------------------------------------------------------------~~~~~~~~~y~aPE 187 (313)
T cd06633 174 ------------------------------------------------------------------ANSFVGTPYWMAPE 187 (313)
T ss_pred ------------------------------------------------------------------CCCccccccccChh
Confidence 00345778899999
Q ss_pred ccc---CCCCCccchhHHHHHHHHHHhCCCC---cHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCH
Q 001548 503 ELS---GGVCTTSSNIYSLGVLFFELFGRFD---SERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT 576 (1056)
Q Consensus 503 ~l~---~~~~t~~sDIwSLGvlL~eLlt~f~---~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~ 576 (1056)
++. ...++.++|||||||++|||+++.. ........................+..+.+|+.+||+++|.+||++
T Consensus 188 ~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~ 267 (313)
T cd06633 188 VILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPAS 267 (313)
T ss_pred hccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCH
Confidence 984 3568899999999999999998633 2222232222222221111222345678999999999999999999
Q ss_pred HHHhhhhhhhhhh
Q 001548 577 REILQSEVTNEFQ 589 (1056)
Q Consensus 577 ~eil~~~~~~~~~ 589 (1056)
.+++.||||...+
T Consensus 268 ~~~l~~~~~~~~~ 280 (313)
T cd06633 268 AELLRHDFVRRDR 280 (313)
T ss_pred HHHhcCcccCCCc
Confidence 9999999998753
No 318
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.93 E-value=5.2e-26 Score=257.31 Aligned_cols=215 Identities=16% Similarity=0.174 Sum_probs=153.3
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~QIl~g 341 (1056)
...+....||||+.+......+.. ....|+|+.+++|.+++... ...+++..++.+++||+.|
T Consensus 50 i~~l~~l~h~~i~~~~~~~~~~~~----------------~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~ 113 (314)
T cd08216 50 IITSRQLQHPNILPYVTSFIVDSE----------------LYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNA 113 (314)
T ss_pred HHHHHhcCCcchhhhhheeecCCe----------------EEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHH
Confidence 446677789999986655332111 12389999999999999764 3457788899999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|.|||++||+||||||+||+++.++.+|++|||.+.......... +
T Consensus 114 L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~-----------------------------~----- 159 (314)
T cd08216 114 LDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQ-----------------------------R----- 159 (314)
T ss_pred HHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccc-----------------------------c-----
Confidence 999999999999999999999999999999999886644110000 0
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
..........++..|+||
T Consensus 160 --------------------------------------------------------------~~~~~~~~~~~~~~y~aP 177 (314)
T cd08216 160 --------------------------------------------------------------VVHDFPKSSVKNLPWLSP 177 (314)
T ss_pred --------------------------------------------------------------ccccccccccccccccCH
Confidence 000000134567889999
Q ss_pred ccccC--CCCCccchhHHHHHHHHHHhCCCCcH---HHHHHHHHhhccC--------CCCC-------------------
Q 001548 502 EELSG--GVCTTSSNIYSLGVLFFELFGRFDSE---RALAAAMSDLRDR--------ILPP------------------- 549 (1056)
Q Consensus 502 E~l~~--~~~t~~sDIwSLGvlL~eLlt~f~~~---~~~~~~~~~~~~~--------~lp~------------------- 549 (1056)
|++.+ ..++.++|||||||++|||+++..++ .........+... ..+.
T Consensus 178 E~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (314)
T cd08216 178 EVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRD 257 (314)
T ss_pred HHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhh
Confidence 99876 45889999999999999999863332 2222222111110 0000
Q ss_pred -----CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001548 550 -----SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1056)
Q Consensus 550 -----~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~ 589 (1056)
.....++.+.+|+.+||++||++|||+.++|+||||....
T Consensus 258 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 258 SVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred hhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 0112235678999999999999999999999999998764
No 319
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.93 E-value=8.3e-26 Score=249.37 Aligned_cols=204 Identities=13% Similarity=0.131 Sum_probs=151.8
Q ss_pred hhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Q 001548 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~g 341 (1056)
...+++...|||++.+......... ...+||+++|++|.+++......++...+..++.|++.|
T Consensus 56 e~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~a 119 (268)
T cd05063 56 EASIMGQFSHHNIIRLEGVVTKFKP----------------AMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAG 119 (268)
T ss_pred HHHHHhcCCCCCeeEEEEEEccCCC----------------cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 3457788899998876554322111 124899999999999997766667888999999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|+|||++||+||||||+||+++.++.+|++|||++.........
T Consensus 120 l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~------------------------------------ 163 (268)
T cd05063 120 MKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEG------------------------------------ 163 (268)
T ss_pred HHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccccccc------------------------------------
Confidence 99999999999999999999999999999999988664310000
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
.........+..|+||
T Consensus 164 ----------------------------------------------------------------~~~~~~~~~~~~y~~P 179 (268)
T cd05063 164 ----------------------------------------------------------------TYTTSGGKIPIRWTAP 179 (268)
T ss_pred ----------------------------------------------------------------ceeccCCCcCceecCH
Confidence 0000011224569999
Q ss_pred ccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHH
Q 001548 502 EELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTR 577 (1056)
Q Consensus 502 E~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~ 577 (1056)
|++.+..++.++|||||||++|||++ + |..... ......+......+.....+..+.+|+.+||+.+|..||++.
T Consensus 180 E~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~ 258 (268)
T cd05063 180 EAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN-HEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFV 258 (268)
T ss_pred HHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHH
Confidence 99998889999999999999999986 5 322221 223333333333344445678899999999999999999999
Q ss_pred HHhhh
Q 001548 578 EILQS 582 (1056)
Q Consensus 578 eil~~ 582 (1056)
+|++.
T Consensus 259 ~i~~~ 263 (268)
T cd05063 259 DIVNL 263 (268)
T ss_pred HHHHH
Confidence 99863
No 320
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.93 E-value=6.4e-26 Score=250.58 Aligned_cols=242 Identities=16% Similarity=0.098 Sum_probs=157.3
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC-CchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcc
Q 001548 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1056)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1056)
.+++|+||+|...++... ............ ......-......++...||||+.+..........
T Consensus 5 ~G~fg~v~~~~~~~~~~~---~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~----------- 70 (269)
T cd05042 5 NGWFGKVLLGEAHRGMSK---ARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPY----------- 70 (269)
T ss_pred ccCCceEEEEEEecCCCC---eEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCce-----------
Confidence 467899999864333221 111111111111 11111212234456777999999876553311111
Q ss_pred cccCCCcccccCCCCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcc
Q 001548 299 CWIGGLRQGSSDHGVNLREWLNARGH----KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPI 374 (1056)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~----~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfg 374 (1056)
..+||++.|++|.++|..... ..+...++.++.||+.||.|||++||+||||||+|||++.++.+|++|||
T Consensus 71 -----~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg 145 (269)
T cd05042 71 -----LLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYG 145 (269)
T ss_pred -----EEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccc
Confidence 148999999999999976432 23566788999999999999999999999999999999999999999999
Q ss_pred hhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCC
Q 001548 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (1056)
Q Consensus 375 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~ 454 (1056)
+++........
T Consensus 146 ~~~~~~~~~~~--------------------------------------------------------------------- 156 (269)
T cd05042 146 LALEQYPEDYY--------------------------------------------------------------------- 156 (269)
T ss_pred cccccccchhe---------------------------------------------------------------------
Confidence 88653210000
Q ss_pred CCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccC-------CCCCccchhHHHHHHHHHHhC
Q 001548 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-------GVCTTSSNIYSLGVLFFELFG 527 (1056)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-------~~~t~~sDIwSLGvlL~eLlt 527 (1056)
.......++..|+|||++.. ..++.++|||||||++|||++
T Consensus 157 --------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~ 204 (269)
T cd05042 157 --------------------------------ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFT 204 (269)
T ss_pred --------------------------------eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHh
Confidence 00002345667999998743 456889999999999999997
Q ss_pred -C---CCcHHHHHHHHHhhccCC--CC-C-CCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001548 528 -R---FDSERALAAAMSDLRDRI--LP-P-SFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 528 -~---f~~~~~~~~~~~~~~~~~--lp-~-~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~ 582 (1056)
+ |............+.... ++ + .....++.+..++..|+ .||.+|||+.+|++-
T Consensus 205 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~ 266 (269)
T cd05042 205 AADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHEL 266 (269)
T ss_pred CCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHH
Confidence 3 433322222222222221 11 2 22345666778888888 599999999999863
No 321
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.93 E-value=4.2e-26 Score=249.84 Aligned_cols=200 Identities=20% Similarity=0.199 Sum_probs=153.9
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA-RGHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~-~~~~~~~~~~~~i~~QIl~g 341 (1056)
...++..+|||++.+......+... ..+|+|++|++|.+++.. .+..+++..++.++.||+.|
T Consensus 49 ~~~l~~l~h~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~a 112 (255)
T cd08219 49 AVLLAKMKHPNIVAFKESFEADGHL----------------YIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLG 112 (255)
T ss_pred HHHHHhCCCCCcceEEEEEEECCEE----------------EEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence 4467777899998876654322211 138999999999999865 34457788999999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|.|||++||+|+||||+||+++.++.++++|||+++......
T Consensus 113 l~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-------------------------------------- 154 (255)
T cd08219 113 VQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG-------------------------------------- 154 (255)
T ss_pred HHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccc--------------------------------------
Confidence 999999999999999999999999999999999886543100
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
.......|++.|+||
T Consensus 155 -----------------------------------------------------------------~~~~~~~~~~~~~aP 169 (255)
T cd08219 155 -----------------------------------------------------------------AYACTYVGTPYYVPP 169 (255)
T ss_pred -----------------------------------------------------------------cccccccCCccccCH
Confidence 000134578889999
Q ss_pred ccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001548 502 EELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1056)
Q Consensus 502 E~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~e 578 (1056)
|++.+..++.++|+|||||++|+|+++ |....... ....+.....++.....+..+.+|+.+||+.||.+||++.+
T Consensus 170 E~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~ 248 (255)
T cd08219 170 EIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKN-LILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATT 248 (255)
T ss_pred HHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHH-HHHHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHH
Confidence 999988899999999999999999986 33322222 22233334344444556788999999999999999999999
Q ss_pred Hhhh
Q 001548 579 ILQS 582 (1056)
Q Consensus 579 il~~ 582 (1056)
|+.-
T Consensus 249 il~~ 252 (255)
T cd08219 249 ILSR 252 (255)
T ss_pred Hhhc
Confidence 9863
No 322
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.93 E-value=2.8e-25 Score=252.14 Aligned_cols=202 Identities=16% Similarity=0.145 Sum_probs=152.8
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...++...|||++.+......+.. ...+|+|+.| +|.+++......+++..+..++.||+.||
T Consensus 76 ~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l 138 (317)
T cd06635 76 VKFLQRIKHPNSIEYKGCYLREHT----------------AWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGL 138 (317)
T ss_pred HHHHHhCCCCCEEEEEEEEeeCCe----------------EEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 456677789999876655332211 1247888875 78888876666788889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||+|+||+++.++.+|++|||++.....
T Consensus 139 ~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~----------------------------------------- 177 (317)
T cd06635 139 AYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP----------------------------------------- 177 (317)
T ss_pred HHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC-----------------------------------------
Confidence 999999999999999999999999999999997754220
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.....|+..|+|||
T Consensus 178 ------------------------------------------------------------------~~~~~~~~~y~aPE 191 (317)
T cd06635 178 ------------------------------------------------------------------ANSFVGTPYWMAPE 191 (317)
T ss_pred ------------------------------------------------------------------cccccCCccccChh
Confidence 00235777899999
Q ss_pred ccc---CCCCCccchhHHHHHHHHHHhCCCCc---HHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCH
Q 001548 503 ELS---GGVCTTSSNIYSLGVLFFELFGRFDS---ERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT 576 (1056)
Q Consensus 503 ~l~---~~~~t~~sDIwSLGvlL~eLlt~f~~---~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~ 576 (1056)
.+. ++.++.++|||||||++|||+++..+ ................+......++.+.+|+.+||+.+|.+||++
T Consensus 192 ~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~ 271 (317)
T cd06635 192 VILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTS 271 (317)
T ss_pred hhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCH
Confidence 984 35689999999999999999987433 222222222222222222333456778999999999999999999
Q ss_pred HHHhhhhhhhhh
Q 001548 577 REILQSEVTNEF 588 (1056)
Q Consensus 577 ~eil~~~~~~~~ 588 (1056)
.++++|+|+...
T Consensus 272 ~~il~~~~~~~~ 283 (317)
T cd06635 272 EELLKHMFVLRE 283 (317)
T ss_pred HHHHhChhhhcc
Confidence 999999998654
No 323
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.93 E-value=8.8e-26 Score=249.14 Aligned_cols=245 Identities=16% Similarity=0.104 Sum_probs=164.3
Q ss_pred ccccceeeeCCCCCcccc-cc-ccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCc
Q 001548 220 LKGKGIVCRGPPLNAFKE-RR-GMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1056)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1056)
.+|.|+||+|...+-... .. .....+.......+.....-......++...||||+.+......+..
T Consensus 5 ~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------- 73 (269)
T cd05044 5 SGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEP----------- 73 (269)
T ss_pred cccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCC-----------
Confidence 357799999986432210 00 01111111111111111222233456778899999976554321111
Q ss_pred ccccCCCcccccCCCCCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCC-----
Q 001548 298 SCWIGGLRQGSSDHGVNLREWLNAR------GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN----- 366 (1056)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~------~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~----- 366 (1056)
...+|++++|++|.++|... ...++...++.++.||+.||.|||+++|+|+||||+||+++.++
T Consensus 74 -----~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~ 148 (269)
T cd05044 74 -----QYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADR 148 (269)
T ss_pred -----eEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCc
Confidence 12489999999999999652 23467778999999999999999999999999999999999887
Q ss_pred cEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccc
Q 001548 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1056)
Q Consensus 367 ~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 446 (1056)
.+|++|||+++........
T Consensus 149 ~~~l~dfg~~~~~~~~~~~------------------------------------------------------------- 167 (269)
T cd05044 149 VVKIGDFGLARDIYKSDYY------------------------------------------------------------- 167 (269)
T ss_pred ceEECCccccccccccccc-------------------------------------------------------------
Confidence 8999999998764310000
Q ss_pred cccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHh
Q 001548 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526 (1056)
Q Consensus 447 ~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLl 526 (1056)
.......++..|+|||.+.++.++.++|||||||++|||+
T Consensus 168 ----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ell 207 (269)
T cd05044 168 ----------------------------------------RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEIL 207 (269)
T ss_pred ----------------------------------------ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHH
Confidence 0000223456799999999999999999999999999999
Q ss_pred C-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001548 527 G-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 527 t-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~ 582 (1056)
+ + |...... .....+.....+......++.+.+|+.+||.++|.+||++.+|++.
T Consensus 208 t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 266 (269)
T cd05044 208 TLGQQPYPALNNQ-EVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEI 266 (269)
T ss_pred HcCCCCCcccCHH-HHHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 6 4 3332222 2222233322333334557788999999999999999999998763
No 324
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.93 E-value=7.2e-26 Score=258.25 Aligned_cols=216 Identities=15% Similarity=0.061 Sum_probs=151.3
Q ss_pred hhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHH
Q 001548 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~QIl~gL 342 (1056)
.++....||||+.+......... ...+++++.+++|.+++.... ..+++..++.++.||+.||
T Consensus 51 ~~~~~l~h~niv~~~~~~~~~~~----------------~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL 114 (328)
T cd08226 51 VLSHFFRHPNIMTSWTVFTTGSW----------------LWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGL 114 (328)
T ss_pred HHHHhCCCCCcceEeeeEecCCc----------------eEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHH
Confidence 44556789999986655432211 124889999999999997643 3577888999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
+|||++||+||||||+||++..++.+|++||+.+......... . +
T Consensus 115 ~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~----------~-------------------~------ 159 (328)
T cd08226 115 NYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQK----------A-------------------K------ 159 (328)
T ss_pred HHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcc----------c-------------------c------
Confidence 9999999999999999999999999999999765432210000 0 0
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
. .. .. -....++..|+|||
T Consensus 160 --------------------------------~-----~~----------------------~~--~~~~~~~~~y~aPE 178 (328)
T cd08226 160 --------------------------------V-----VY----------------------DF--PQFSTSVLPWLSPE 178 (328)
T ss_pred --------------------------------c-----cc----------------------cc--cccccCccCccChh
Confidence 0 00 00 00122456699999
Q ss_pred cccCC--CCCccchhHHHHHHHHHHhCCCCcH---HHHHHHHHhhccCCC------------------------------
Q 001548 503 ELSGG--VCTTSSNIYSLGVLFFELFGRFDSE---RALAAAMSDLRDRIL------------------------------ 547 (1056)
Q Consensus 503 ~l~~~--~~t~~sDIwSLGvlL~eLlt~f~~~---~~~~~~~~~~~~~~l------------------------------ 547 (1056)
++.+. .++.++|||||||++|||++|..++ .........+.....
T Consensus 179 ~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (328)
T cd08226 179 LLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESV 258 (328)
T ss_pred hhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccch
Confidence 99873 4789999999999999999874333 222222222211110
Q ss_pred ---------------CCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhhh
Q 001548 548 ---------------PPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (1056)
Q Consensus 548 ---------------p~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~~ 591 (1056)
.+.....++.+.+|+.+||+.||.+|||+.|+|+||||......
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~ 317 (328)
T cd08226 259 VAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQ 317 (328)
T ss_pred hccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHHh
Confidence 01112345678899999999999999999999999999876543
No 325
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.93 E-value=5e-26 Score=250.83 Aligned_cols=202 Identities=16% Similarity=0.170 Sum_probs=152.4
Q ss_pred hhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHh---cCCCCCHHHHHHHHHHH
Q 001548 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQI 338 (1056)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~QI 338 (1056)
....++...|||++.+.+...... .-..++++++|++|.+++.. ....+++..++.++.||
T Consensus 52 e~~~l~~l~h~~i~~~~~~~~~~~----------------~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i 115 (267)
T cd08228 52 EIDLLKQLNHPNVIKYLDSFIEDN----------------ELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQL 115 (267)
T ss_pred HHHHHHhCCCcceeeeeeeEEECC----------------eEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHH
Confidence 355678889999997665432211 11248999999999998853 33456777899999999
Q ss_pred HHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccc
Q 001548 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (1056)
Q Consensus 339 l~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 418 (1056)
+.||.|||++||+|+||||+||+++.++.++++|||++.......
T Consensus 116 ~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~----------------------------------- 160 (267)
T cd08228 116 CSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT----------------------------------- 160 (267)
T ss_pred HHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchh-----------------------------------
Confidence 999999999999999999999999999999999999886643100
Q ss_pred ccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCc
Q 001548 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (1056)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 498 (1056)
.......|++.|
T Consensus 161 --------------------------------------------------------------------~~~~~~~~~~~~ 172 (267)
T cd08228 161 --------------------------------------------------------------------TAAHSLVGTPYY 172 (267)
T ss_pred --------------------------------------------------------------------HHHhcCCCCccc
Confidence 000134577889
Q ss_pred cCcccccCCCCCccchhHHHHHHHHHHhCCCCc---H-HHHHHHHHhhccCCCCCCCC-CCChhHHHHHHhccccCCCCC
Q 001548 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDS---E-RALAAAMSDLRDRILPPSFL-SENPKEAGFCLWQLHPEPLSR 573 (1056)
Q Consensus 499 ~APE~l~~~~~t~~sDIwSLGvlL~eLlt~f~~---~-~~~~~~~~~~~~~~lp~~~~-~~~~~~~~li~~lL~~dP~~R 573 (1056)
+|||.+.+..++.++|||||||++|||+++..+ . .........+.....|+... ..+..+.+|+.+||+.+|++|
T Consensus 173 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R 252 (267)
T cd08228 173 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQR 252 (267)
T ss_pred cChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccC
Confidence 999999988899999999999999999986222 1 12223333344434444332 456778999999999999999
Q ss_pred CCHHHHhhh
Q 001548 574 PTTREILQS 582 (1056)
Q Consensus 574 pt~~eil~~ 582 (1056)
|++.+|++.
T Consensus 253 p~~~~vl~~ 261 (267)
T cd08228 253 PDIGYVHQI 261 (267)
T ss_pred cCHHHHHHH
Confidence 999999874
No 326
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.93 E-value=6.3e-26 Score=250.77 Aligned_cols=200 Identities=14% Similarity=0.093 Sum_probs=151.5
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....|||++.+......+. ...+|+++++++|.+++......++...++.++.||+.||
T Consensus 58 ~~~l~~~~h~~i~~~~~~~~~~~-----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l 120 (270)
T cd05056 58 AYIMRQFDHPHIVKLIGVITENP-----------------VWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTAL 120 (270)
T ss_pred HHHHHhCCCCchhceeEEEcCCC-----------------cEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 44667778999998665422110 1138999999999999987666678889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
+|||++|++|+||||+||+++.++.+|++|||+++........
T Consensus 121 ~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~------------------------------------- 163 (270)
T cd05056 121 AYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYY------------------------------------- 163 (270)
T ss_pred HHHHhCCeeccccChheEEEecCCCeEEccCceeeecccccce-------------------------------------
Confidence 9999999999999999999999999999999988664410000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
..+...++..|+|||
T Consensus 164 -----------------------------------------------------------------~~~~~~~~~~y~aPE 178 (270)
T cd05056 164 -----------------------------------------------------------------KASKGKLPIKWMAPE 178 (270)
T ss_pred -----------------------------------------------------------------ecCCCCccccccChh
Confidence 000112345699999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~e 578 (1056)
.+.+..++.++|||||||++|||++ + |.......... .+.....++.....++.+.+|+.+||.++|.+|||+.+
T Consensus 179 ~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ 257 (270)
T cd05056 179 SINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIG-RIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTE 257 (270)
T ss_pred hhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH-HHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 9988889999999999999999885 4 43333322222 23333333444566788999999999999999999999
Q ss_pred Hhhh
Q 001548 579 ILQS 582 (1056)
Q Consensus 579 il~~ 582 (1056)
++..
T Consensus 258 ~~~~ 261 (270)
T cd05056 258 LKAQ 261 (270)
T ss_pred HHHH
Confidence 8874
No 327
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.93 E-value=8.8e-26 Score=247.27 Aligned_cols=236 Identities=14% Similarity=0.113 Sum_probs=163.8
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCc
Q 001548 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1056)
Q Consensus 214 ~~~k~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1056)
|-+.+.+ +|.|.||+|...+...+ .+ ..+.....+ .-......+....|||++.+......+.
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~~~~~~------iK-~~~~~~~~~--~~~~e~~~l~~~~~~~i~~~~~~~~~~~------ 72 (254)
T cd05083 8 LTLGEIIGEGEFGAVLQGEYTGQKVA------VK-NIKCDVTAQ--AFLEETAVMTKLHHKNLVRLLGVILHNG------ 72 (254)
T ss_pred ceeeeeeccCCCCceEecccCCCceE------EE-eecCcchHH--HHHHHHHHHHhCCCCCcCeEEEEEcCCC------
Confidence 4444444 47899999986433222 11 111111111 1112244677778999988655432211
Q ss_pred CCCCCcccccCCCcccccCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEE
Q 001548 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1056)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl 370 (1056)
...+|+|+.|++|.+++.... ..++...++.++.||+.||.|||+.|++||||||+||+++.++.+|+
T Consensus 73 -----------~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl 141 (254)
T cd05083 73 -----------LYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKV 141 (254)
T ss_pred -----------cEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEE
Confidence 124899999999999997654 35778789999999999999999999999999999999999999999
Q ss_pred eCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccC
Q 001548 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1056)
Q Consensus 371 ~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g 450 (1056)
+|||+++.....
T Consensus 142 ~Dfg~~~~~~~~-------------------------------------------------------------------- 153 (254)
T cd05083 142 SDFGLARVGSMG-------------------------------------------------------------------- 153 (254)
T ss_pred CCCccceecccc--------------------------------------------------------------------
Confidence 999987543200
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C-
Q 001548 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R- 528 (1056)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~- 528 (1056)
......+..|+|||.+.+..++.++|+|||||++|||++ +
T Consensus 154 --------------------------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~ 195 (254)
T cd05083 154 --------------------------------------VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGR 195 (254)
T ss_pred --------------------------------------CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCC
Confidence 001112345999999998899999999999999999996 4
Q ss_pred --CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001548 529 --FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 529 --f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~ 582 (1056)
|....... ....+.....++.....++.+.+|+.+||+++|.+||++.+++..
T Consensus 196 ~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 250 (254)
T cd05083 196 APYPKMSLKE-VKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREK 250 (254)
T ss_pred CCCccCCHHH-HHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 32222211 222222222233334567889999999999999999999999863
No 328
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.93 E-value=4.9e-26 Score=253.11 Aligned_cols=204 Identities=20% Similarity=0.163 Sum_probs=149.3
Q ss_pred hhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHH
Q 001548 265 MVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~QIl~g 341 (1056)
.++...|||++.+......+... ...++|++ ++|.+++.. .+..+++..++.++.||+.|
T Consensus 53 ~~~~~~~~~iv~~~~~~~~~~~~----------------~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~ 115 (283)
T cd06617 53 SMRSVDCPYTVTFYGALFREGDV----------------WICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKA 115 (283)
T ss_pred HHHHcCCCCeeeeeEEEecCCcE----------------EEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHH
Confidence 45667899999866653322111 12677776 688888754 23467888999999999999
Q ss_pred HHHhhhc-CcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccc
Q 001548 342 VDYHHTQ-GVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (1056)
Q Consensus 342 L~ylHs~-gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 420 (1056)
|.|||++ +++||||||+||+++.++.+||+|||+++......
T Consensus 116 l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~------------------------------------- 158 (283)
T cd06617 116 LEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV------------------------------------- 158 (283)
T ss_pred HHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccccc-------------------------------------
Confidence 9999998 99999999999999999999999999886543100
Q ss_pred ccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccC
Q 001548 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (1056)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 500 (1056)
..+...|+..|+|
T Consensus 159 -------------------------------------------------------------------~~~~~~~~~~y~a 171 (283)
T cd06617 159 -------------------------------------------------------------------AKTIDAGCKPYMA 171 (283)
T ss_pred -------------------------------------------------------------------ccccccCCccccC
Confidence 0012457788999
Q ss_pred cccccC----CCCCccchhHHHHHHHHHHhCCCCcHH---HHHHHHHhhccCCCCCCC-CCCChhHHHHHHhccccCCCC
Q 001548 501 PEELSG----GVCTTSSNIYSLGVLFFELFGRFDSER---ALAAAMSDLRDRILPPSF-LSENPKEAGFCLWQLHPEPLS 572 (1056)
Q Consensus 501 PE~l~~----~~~t~~sDIwSLGvlL~eLlt~f~~~~---~~~~~~~~~~~~~lp~~~-~~~~~~~~~li~~lL~~dP~~ 572 (1056)
||.+.+ ..++.++|+|||||++|||+++..++. ..............+... ...+..+.+|+.+||..+|.+
T Consensus 172 PE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~ 251 (283)
T cd06617 172 PERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKE 251 (283)
T ss_pred hhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhh
Confidence 999865 457899999999999999998733321 111112222222222111 235678899999999999999
Q ss_pred CCCHHHHhhhhhhhhhh
Q 001548 573 RPTTREILQSEVTNEFQ 589 (1056)
Q Consensus 573 Rpt~~eil~~~~~~~~~ 589 (1056)
||++.++++||||....
T Consensus 252 Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 252 RPNYPELLQHPFFELHL 268 (283)
T ss_pred CcCHHHHhcCchhhhcc
Confidence 99999999999998754
No 329
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.93 E-value=3e-25 Score=231.37 Aligned_cols=260 Identities=16% Similarity=0.263 Sum_probs=205.6
Q ss_pred ecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCC---------CCCcccccc--eEeecCCCCeEEEEEecCCCCE
Q 001548 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALF---------NDSVDVYYP--AVEMSNRSKLSCVCWNNYIKNY 843 (1056)
Q Consensus 775 l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~---------~~~~~~~~~--~~~~~h~~~V~~l~~~~~~~~~ 843 (1056)
+..|.+++.+.+|+|||.++|||+.|..|||+|++... ....+...| .....|...|+++.|+|. ...
T Consensus 108 lt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPr-e~I 186 (430)
T KOG0640|consen 108 LTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPR-ETI 186 (430)
T ss_pred EeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecch-hhe
Confidence 55899999999999999999999999999999998421 111122223 345679999999999998 889
Q ss_pred EEEEECCCcEEEEEcCCCc---eEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEe----CCCCe
Q 001548 844 LASADYDGVVKLWDACTGQ---TVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK----NIANV 916 (1056)
Q Consensus 844 LaSgs~Dg~V~lWD~~t~~---~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~----~~~~V 916 (1056)
|+||+.|++|+++|..... ..+.|. ....|.+++|+| .|.+|+.|.+-.++++||+++.+|...-. |.+.|
T Consensus 187 LiS~srD~tvKlFDfsK~saKrA~K~~q-d~~~vrsiSfHP-sGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai 264 (430)
T KOG0640|consen 187 LISGSRDNTVKLFDFSKTSAKRAFKVFQ-DTEPVRSISFHP-SGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAI 264 (430)
T ss_pred EEeccCCCeEEEEecccHHHHHHHHHhh-ccceeeeEeecC-CCceEEEecCCCceeEEeccceeEeeecCcccccccce
Confidence 9999999999999997543 333443 456899999999 99999999999999999999999877654 67889
Q ss_pred EEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCC-CeEEEEEc-CCCEEEEEECCCeEEEEECCCCCCCCCC
Q 001548 917 CCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEK-AVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPS 994 (1056)
Q Consensus 917 ~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~-~V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~ 994 (1056)
++|.+++.++ +.++||.||.|++||--+.++....-.+|.+ .|.+..|. ++++|+|.+.|.++++|.+.
T Consensus 265 ~~V~Ys~t~~-lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~-------- 335 (430)
T KOG0640|consen 265 TQVRYSSTGS-LYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEIS-------- 335 (430)
T ss_pred eEEEecCCcc-EEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeec--------
Confidence 9999999997 9999999999999998887764444466765 68999999 88999999999999999998
Q ss_pred CCceeEEecCC----------------CC-cE-------EEEE--------------ecCCcceeeEEeeCCCCEEEEEE
Q 001548 995 TNACSLTFSGH----------------TN-EK-------VGIC--------------RLEHNLFPFTIFNLSDCWLLLVC 1036 (1056)
Q Consensus 995 ~~~~~~~~~gH----------------~~-~V-------v~ls--------------~~~~~~~~~~~~s~~g~~l~s~s 1036 (1056)
+++++.++.|- +. .| .+++ ..-++...+...||.+..+++||
T Consensus 336 t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p~FmTcs 415 (430)
T KOG0640|consen 336 TGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEPAFMTCS 415 (430)
T ss_pred CCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCCCceeeec
Confidence 45555555432 11 11 1111 11122333566799999999999
Q ss_pred cCCcEEEEeC
Q 001548 1037 FDFTTLSFRT 1046 (1056)
Q Consensus 1037 ~D~~v~iW~v 1046 (1056)
.|.+.++|--
T Consensus 416 dD~raRFWyr 425 (430)
T KOG0640|consen 416 DDFRARFWYR 425 (430)
T ss_pred ccceeeeeee
Confidence 9999999963
No 330
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.93 E-value=5.9e-26 Score=259.82 Aligned_cols=216 Identities=17% Similarity=0.214 Sum_probs=151.8
Q ss_pred hhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Q 001548 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~g 341 (1056)
...++...+|||++.+........... . .....+++++. ++|.++++.. .+++..++.++.||+.|
T Consensus 53 E~~~l~~l~h~niv~~~~~~~~~~~~~------~-----~~~~lv~e~~~-~~l~~~~~~~--~l~~~~~~~i~~ql~~a 118 (336)
T cd07849 53 EIKILRRFKHENIIGILDIIRPPSFES------F-----NDVYIVQELME-TDLYKLIKTQ--HLSNDHIQYFLYQILRG 118 (336)
T ss_pred HHHHHHhCCCCCcCchhheeecccccc------c-----ceEEEEehhcc-cCHHHHHhcC--CCCHHHHHHHHHHHHHH
Confidence 345677778999998665432211111 0 00123666766 4888887543 57777999999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|.|||++||+||||||+||+++.++.+|++|||+++.......
T Consensus 119 L~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~------------------------------------- 161 (336)
T cd07849 119 LKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHD------------------------------------- 161 (336)
T ss_pred HHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecccccc-------------------------------------
Confidence 9999999999999999999999999999999998866431000
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
........+||+.|+||
T Consensus 162 ---------------------------------------------------------------~~~~~~~~~~~~~y~aP 178 (336)
T cd07849 162 ---------------------------------------------------------------HTGFLTEYVATRWYRAP 178 (336)
T ss_pred ---------------------------------------------------------------ccCCcCCcCcCCCccCh
Confidence 00001145788999999
Q ss_pred ccccC-CCCCccchhHHHHHHHHHHhCC---CCcHHHH--HHHHHhhccCC-------------------C--------C
Q 001548 502 EELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERAL--AAAMSDLRDRI-------------------L--------P 548 (1056)
Q Consensus 502 E~l~~-~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~--~~~~~~~~~~~-------------------l--------p 548 (1056)
|++.+ ..++.++|||||||++|+|++| |...... ...+..+.... . .
T Consensus 179 E~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (336)
T cd07849 179 EIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWN 258 (336)
T ss_pred HHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHH
Confidence 98765 5689999999999999999986 3222111 11110000000 0 0
Q ss_pred CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhhh
Q 001548 549 PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (1056)
Q Consensus 549 ~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~~ 591 (1056)
...+..++.+.+|+.+||+++|.+|||+.++++||||......
T Consensus 259 ~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~ 301 (336)
T cd07849 259 KLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDP 301 (336)
T ss_pred HHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCC
Confidence 1123457788999999999999999999999999999876554
No 331
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.93 E-value=3.5e-26 Score=250.79 Aligned_cols=214 Identities=18% Similarity=0.202 Sum_probs=157.0
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....|||++.+......+.. ...+++++.|++|.+++...+ .+++..+..+++||+.||
T Consensus 44 ~~~l~~~~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L 106 (265)
T cd05579 44 RDILSQAQSPYVVKLYYSFQGKKN----------------LYLVMEYLPGGDLASLLENVG-SLDEDVARIYIAEIVLAL 106 (265)
T ss_pred HHHHHhCCCcchhHHHHheecCcE----------------EEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHH
Confidence 345667789999876544221111 124889999999999998765 577779999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+|+||+|+||+++.++.+|++|||++...........
T Consensus 107 ~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~----------------------------------- 151 (265)
T cd05579 107 EYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINL----------------------------------- 151 (265)
T ss_pred HHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccc-----------------------------------
Confidence 999999999999999999999999999999998865431100000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
+ ..........++..|+|||
T Consensus 152 ---------------------------~---------------------------------~~~~~~~~~~~~~~~~~Pe 171 (265)
T cd05579 152 ---------------------------N---------------------------------DDEKEDKRIVGTPDYIAPE 171 (265)
T ss_pred ---------------------------c---------------------------------cccccccCcccCccccCHH
Confidence 0 0000111456778899999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCH---
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT--- 576 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~--- 576 (1056)
.+.+..++.++|||||||++|+|+++ |..................++.....++.+.+|+.+||+.+|.+|||+
T Consensus 172 ~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~ 251 (265)
T cd05579 172 VILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSI 251 (265)
T ss_pred HhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccH
Confidence 99888899999999999999999986 333222222222222222223333347889999999999999999999
Q ss_pred HHHhhhhhhhhh
Q 001548 577 REILQSEVTNEF 588 (1056)
Q Consensus 577 ~eil~~~~~~~~ 588 (1056)
.++|+||||...
T Consensus 252 ~~~l~~~~~~~~ 263 (265)
T cd05579 252 EEIKNHPFFKGI 263 (265)
T ss_pred HHHhcCccccCC
Confidence 999999999753
No 332
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.93 E-value=5.8e-26 Score=249.90 Aligned_cols=254 Identities=15% Similarity=0.172 Sum_probs=215.3
Q ss_pred eecCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCc
Q 001548 774 EFNNSANVICSISFDR-DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGV 852 (1056)
Q Consensus 774 ~l~~h~~~V~sv~fsp-dg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~ 852 (1056)
.+.+|+..|+++.|.| .+.+|+++|.|+.|+||++-. +......+++|...|.+++|+++ +..|+|+|+|++
T Consensus 209 ~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~------~~~~lrtf~gH~k~Vrd~~~s~~-g~~fLS~sfD~~ 281 (503)
T KOG0282|consen 209 NLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYD------DRRCLRTFKGHRKPVRDASFNNC-GTSFLSASFDRF 281 (503)
T ss_pred eccCCccccchhhhccceeeEEEecCCCceEEEEEEec------Ccceehhhhcchhhhhhhhcccc-CCeeeeeeccee
Confidence 5779999999999999 899999999999999999864 34566778899999999999998 999999999999
Q ss_pred EEEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEE
Q 001548 853 VKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAF 931 (1056)
Q Consensus 853 V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~las 931 (1056)
|++||++||+++..|. -...++||.|+|++.+.|++|+.|+.|+.||+|+++.++.+. |-+.|..+.|-+.+. .+++
T Consensus 282 lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~-rFis 359 (503)
T KOG0282|consen 282 LKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGR-RFIS 359 (503)
T ss_pred eeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCc-eEee
Confidence 9999999999999986 456789999999776999999999999999999999888886 568899999999997 7889
Q ss_pred EeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEE
Q 001548 932 GSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKV 1010 (1056)
Q Consensus 932 Gs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv 1010 (1056)
.++|+.+++|+.+..-..-.....+...+.++..+ .++.++.-|.|+.|.++.+...- .......|.||...=.
T Consensus 360 sSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~-----r~nkkK~feGh~vaGy 434 (503)
T KOG0282|consen 360 SSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPF-----RLNKKKRFEGHSVAGY 434 (503)
T ss_pred eccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEeccccc-----ccCHhhhhcceeccCc
Confidence 99999999999988765333344444556777777 56778889999999999976321 2234567899976655
Q ss_pred EEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCCe
Q 001548 1011 GICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWGC 1050 (1056)
Q Consensus 1011 ~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~~ 1050 (1056)
++.. .|||||.+|++|..|+.+.+||..+-.
T Consensus 435 s~~v---------~fSpDG~~l~SGdsdG~v~~wdwkt~k 465 (503)
T KOG0282|consen 435 SCQV---------DFSPDGRTLCSGDSDGKVNFWDWKTTK 465 (503)
T ss_pred eeeE---------EEcCCCCeEEeecCCccEEEeechhhh
Confidence 5553 399999999999999999999976543
No 333
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.93 E-value=7.8e-26 Score=253.38 Aligned_cols=203 Identities=15% Similarity=0.108 Sum_probs=148.2
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC----------CCCCHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG----------HKGKRIECL 332 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~----------~~~~~~~~~ 332 (1056)
...+....|||++.+......+.. ....|+++.|++|.++|.... ..++...++
T Consensus 70 ~~~l~~l~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 133 (296)
T cd05051 70 VKILSRLSDPNIARLLGVCTVDPP----------------LCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLL 133 (296)
T ss_pred HHHHHhcCCCCEeEEEEEEecCCC----------------cEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHH
Confidence 456777899999876655332211 123889999999999996654 257788999
Q ss_pred HHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccc
Q 001548 333 YIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASA 412 (1056)
Q Consensus 333 ~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (1056)
.++.||+.||.|||++||+||||||+||+++.++.++++|||+++........
T Consensus 134 ~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~--------------------------- 186 (296)
T cd05051 134 YMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYY--------------------------- 186 (296)
T ss_pred HHHHHHHHHHHHHHHcCccccccchhceeecCCCceEEccccceeecccCcce---------------------------
Confidence 99999999999999999999999999999999999999999988654311000
Q ss_pred ccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCcccccccccccccccc
Q 001548 413 KKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQ 492 (1056)
Q Consensus 413 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (1056)
......
T Consensus 187 --------------------------------------------------------------------------~~~~~~ 192 (296)
T cd05051 187 --------------------------------------------------------------------------RVQGRA 192 (296)
T ss_pred --------------------------------------------------------------------------eecCcC
Confidence 000023
Q ss_pred ccCCCccCcccccCCCCCccchhHHHHHHHHHHhC--C---CCcHHHHHHHH--Hhh----ccCCCCCCCCCCChhHHHH
Q 001548 493 LEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG--R---FDSERALAAAM--SDL----RDRILPPSFLSENPKEAGF 561 (1056)
Q Consensus 493 ~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt--~---f~~~~~~~~~~--~~~----~~~~lp~~~~~~~~~~~~l 561 (1056)
.++..|+|||.+.+..++.++|||||||++|||++ + |.......... ... ......+.....++++.+|
T Consensus 193 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 272 (296)
T cd05051 193 PLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYEL 272 (296)
T ss_pred CCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHH
Confidence 45677999999998889999999999999999986 2 22111111111 111 1111222233456788999
Q ss_pred HHhccccCCCCCCCHHHHhhh
Q 001548 562 CLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 562 i~~lL~~dP~~Rpt~~eil~~ 582 (1056)
+.+||+.||.+|||+.+|++.
T Consensus 273 i~~cl~~~p~~Rpt~~el~~~ 293 (296)
T cd05051 273 MLECWRRDEEDRPTFREIHLF 293 (296)
T ss_pred HHHHhccChhcCCCHHHHHHH
Confidence 999999999999999999764
No 334
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.93 E-value=3.5e-26 Score=261.51 Aligned_cols=219 Identities=17% Similarity=0.233 Sum_probs=155.8
Q ss_pred hhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Q 001548 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~g 341 (1056)
...++....||||+.+........... .....+|+|+. ++|.+++...+ .++...++.++.||+.|
T Consensus 54 e~~~l~~l~h~~iv~~~~~~~~~~~~~------------~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~i~~qi~~a 119 (334)
T cd07855 54 ELKILRHFKHDNIIAIRDILRPPGADF------------KDVYVVMDLME-SDLHHIIHSDQ-PLTEEHIRYFLYQLLRG 119 (334)
T ss_pred HHHHHHhcCCCCccCHHHhccccCCCC------------ceEEEEEehhh-hhHHHHhccCC-CCCHHHHHHHHHHHHHH
Confidence 346777888999997654322111000 00124788885 58999987654 47788999999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|.|||++||+||||||+||+++.++.+||+|||+++........
T Consensus 120 L~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~------------------------------------ 163 (334)
T cd07855 120 LKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTE------------------------------------ 163 (334)
T ss_pred HHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcC------------------------------------
Confidence 99999999999999999999999999999999988664310000
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
.....+..+|+.+|+||
T Consensus 164 ---------------------------------------------------------------~~~~~~~~~~~~~y~~P 180 (334)
T cd07855 164 ---------------------------------------------------------------HKYFMTEYVATRWYRAP 180 (334)
T ss_pred ---------------------------------------------------------------CCcccccccccccccCh
Confidence 00011245788999999
Q ss_pred ccccC-CCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHH--------------------------HhhccCC-C--C
Q 001548 502 EELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERALAAAM--------------------------SDLRDRI-L--P 548 (1056)
Q Consensus 502 E~l~~-~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~--------------------------~~~~~~~-l--p 548 (1056)
|.+.+ ..++.++|||||||++|||+++ |.+........ ....... . .
T Consensus 181 E~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (334)
T cd07855 181 ELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWS 260 (334)
T ss_pred HHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHH
Confidence 99876 4589999999999999999986 33221111100 0000000 0 0
Q ss_pred CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhhhch
Q 001548 549 PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCA 593 (1056)
Q Consensus 549 ~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~~~~ 593 (1056)
......++.+.+||.+||+.+|.+||++.+++.||||...+.+..
T Consensus 261 ~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~~ 305 (334)
T cd07855 261 KIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPDD 305 (334)
T ss_pred HHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCcc
Confidence 012345788999999999999999999999999999998766654
No 335
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.93 E-value=5.2e-26 Score=248.85 Aligned_cols=203 Identities=18% Similarity=0.193 Sum_probs=154.8
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~QIl~g 341 (1056)
...++...|||++.+......+.. ...+++|+.|++|.+++... +..+++..++.++.||+.|
T Consensus 50 ~~~l~~~~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~ 113 (257)
T cd08225 50 VILLAKMKHPNIVTFFASFQENGR----------------LFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLG 113 (257)
T ss_pred HHHHHhCCCCChhhhhheeccCCe----------------EEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence 446777789999876554322111 12488999999999999654 3356888999999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCc-EEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQ-VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~-vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 420 (1056)
|.|||++||+|+||||+||+++.++. +|++|||.+.......
T Consensus 114 l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~------------------------------------- 156 (257)
T cd08225 114 LKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM------------------------------------- 156 (257)
T ss_pred HHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc-------------------------------------
Confidence 99999999999999999999988764 6999999876543100
Q ss_pred ccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccC
Q 001548 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (1056)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 500 (1056)
.......|++.|+|
T Consensus 157 ------------------------------------------------------------------~~~~~~~~~~~~~a 170 (257)
T cd08225 157 ------------------------------------------------------------------ELAYTCVGTPYYLS 170 (257)
T ss_pred ------------------------------------------------------------------ccccccCCCccccC
Confidence 00002357788999
Q ss_pred cccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHH
Q 001548 501 PEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTR 577 (1056)
Q Consensus 501 PE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~ 577 (1056)
||.+.+..++.++|+|||||++|||+++ |.......... ......+++.....+..+.+++.+||..+|++|||+.
T Consensus 171 pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~ 249 (257)
T cd08225 171 PEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVL-KICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSIT 249 (257)
T ss_pred HHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHH-HHhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHH
Confidence 9999888899999999999999999986 33322222222 3333344444556678899999999999999999999
Q ss_pred HHhhhhhh
Q 001548 578 EILQSEVT 585 (1056)
Q Consensus 578 eil~~~~~ 585 (1056)
+++.||||
T Consensus 250 ~ll~~~~~ 257 (257)
T cd08225 250 SILKRPFL 257 (257)
T ss_pred HHhhCCCC
Confidence 99999997
No 336
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.93 E-value=5.1e-26 Score=252.74 Aligned_cols=206 Identities=16% Similarity=0.183 Sum_probs=154.9
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~QIl~g 341 (1056)
..++...+|||++.+......+.. ...+|+|++|++|.+++...+ ..+++..++.++.||+.|
T Consensus 44 ~~~l~~l~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~ 107 (277)
T cd05577 44 KKILEKVSSRFIVSLAYAFETKDD----------------LCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICG 107 (277)
T ss_pred HHHHHhCCCCCEeeeeeEEecCCe----------------EEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHH
Confidence 456777789998876544322111 124899999999999997654 357888999999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|.|||++||+|+||||+||+++.++.+|++|||++.......
T Consensus 108 l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~-------------------------------------- 149 (277)
T cd05577 108 LEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK-------------------------------------- 149 (277)
T ss_pred HHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC--------------------------------------
Confidence 999999999999999999999999999999999886543100
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
......++..|+||
T Consensus 150 ------------------------------------------------------------------~~~~~~~~~~y~~P 163 (277)
T cd05577 150 ------------------------------------------------------------------KIKGRAGTPGYMAP 163 (277)
T ss_pred ------------------------------------------------------------------ccccccCCCCcCCH
Confidence 00023466779999
Q ss_pred ccccCCCCCccchhHHHHHHHHHHhCCCCcH---HH---HHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCC-
Q 001548 502 EELSGGVCTTSSNIYSLGVLFFELFGRFDSE---RA---LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP- 574 (1056)
Q Consensus 502 E~l~~~~~t~~sDIwSLGvlL~eLlt~f~~~---~~---~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rp- 574 (1056)
|.+.+..++.++|||||||++|+|+++..++ .. .......... ...+.....++.+.+||.+||+.||.+||
T Consensus 164 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~~ 242 (277)
T cd05577 164 EVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE-MAVEYPDKFSPEAKDLCEALLQKDPEKRLG 242 (277)
T ss_pred HHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc-ccccCCccCCHHHHHHHHHHccCChhHccC
Confidence 9999888999999999999999999863222 11 1111111111 11122334588899999999999999999
Q ss_pred ----CHHHHhhhhhhhhhh
Q 001548 575 ----TTREILQSEVTNEFQ 589 (1056)
Q Consensus 575 ----t~~eil~~~~~~~~~ 589 (1056)
++.+++.||||....
T Consensus 243 ~~~~~~~~ll~h~~~~~~~ 261 (277)
T cd05577 243 CRGGSADEVREHPLFKDLN 261 (277)
T ss_pred CCcccHHHHHhChhhhcCC
Confidence 889999999997643
No 337
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.93 E-value=7.8e-26 Score=264.35 Aligned_cols=156 Identities=12% Similarity=0.139 Sum_probs=118.3
Q ss_pred CCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccc
Q 001548 326 GKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMF 405 (1056)
Q Consensus 326 ~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (1056)
++...++.|+.||+.||.|||++||+||||||+|||++.++.+|++|||+++.......
T Consensus 236 l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~--------------------- 294 (401)
T cd05107 236 LSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSN--------------------- 294 (401)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceecccccc---------------------
Confidence 44556788999999999999999999999999999999999999999999876431000
Q ss_pred cccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccc
Q 001548 406 TTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQ 485 (1056)
Q Consensus 406 ~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (1056)
T Consensus 295 -------------------------------------------------------------------------------- 294 (401)
T cd05107 295 -------------------------------------------------------------------------------- 294 (401)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHH
Q 001548 486 STSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGF 561 (1056)
Q Consensus 486 ~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~l 561 (1056)
........++..|+|||.+.+..++.++|||||||+||||++ + |............+.....++.....++.+.+|
T Consensus 295 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~l 374 (401)
T cd05107 295 YISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEI 374 (401)
T ss_pred cccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHH
Confidence 000002356778999999998889999999999999999996 3 332222222222233332233344567889999
Q ss_pred HHhccccCCCCCCCHHHHhhh
Q 001548 562 CLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 562 i~~lL~~dP~~Rpt~~eil~~ 582 (1056)
+.+||+++|.+||++.+|++.
T Consensus 375 i~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 375 MQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred HHHHcCCChhHCcCHHHHHHH
Confidence 999999999999999999885
No 338
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.93 E-value=6.7e-26 Score=247.84 Aligned_cols=202 Identities=20% Similarity=0.214 Sum_probs=153.7
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~QIl~g 341 (1056)
...++...|||++.+......+.. ...+|++++|++|.+++... +..+++..++.++.|++.|
T Consensus 50 ~~~l~~~~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~ 113 (256)
T cd08220 50 CQVLKLLSHPNIIEYYENFLEDKA----------------LMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLA 113 (256)
T ss_pred HHHHhhCCCCchhheeeeEecCCE----------------EEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHH
Confidence 446777789998875544221111 12489999999999999764 3457888999999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCC-cEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSN-QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~-~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 420 (1056)
|.|||++||+|+||||+||+++.++ .+|++|||+++......
T Consensus 114 l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~------------------------------------- 156 (256)
T cd08220 114 LHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS------------------------------------- 156 (256)
T ss_pred HHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-------------------------------------
Confidence 9999999999999999999998654 58999999886643100
Q ss_pred ccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccC
Q 001548 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (1056)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 500 (1056)
......|+..|+|
T Consensus 157 -------------------------------------------------------------------~~~~~~~~~~y~a 169 (256)
T cd08220 157 -------------------------------------------------------------------KAYTVVGTPCYIS 169 (256)
T ss_pred -------------------------------------------------------------------cccccccCCcccC
Confidence 0002457788999
Q ss_pred cccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHH
Q 001548 501 PEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTR 577 (1056)
Q Consensus 501 PE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~ 577 (1056)
||.+.+..++.++|||||||++|+|+++ |.............. ...++.....++.+.+|+.+||+++|.+|||+.
T Consensus 170 PE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~ 248 (256)
T cd08220 170 PELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMS-GTFAPISDRYSPDLRQLILSMLNLDPSKRPQLS 248 (256)
T ss_pred chhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHh-cCCCCCCCCcCHHHHHHHHHHccCChhhCCCHH
Confidence 9999988899999999999999999985 444333333333332 222333335688899999999999999999999
Q ss_pred HHhhhhhh
Q 001548 578 EILQSEVT 585 (1056)
Q Consensus 578 eil~~~~~ 585 (1056)
|+++||||
T Consensus 249 ~ll~~p~~ 256 (256)
T cd08220 249 QIMAQPIC 256 (256)
T ss_pred HHhhCCCC
Confidence 99999996
No 339
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.93 E-value=1.2e-25 Score=248.62 Aligned_cols=242 Identities=14% Similarity=0.057 Sum_probs=156.7
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCccc
Q 001548 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1056)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1056)
.+|+|+||+|...++... .....+....................+....|||++.+.........
T Consensus 5 ~G~~g~Vy~~~~~~~~~~--~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~------------- 69 (269)
T cd05087 5 NGWFGKVILGEVNSGYTP--AQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTP------------- 69 (269)
T ss_pred ccCCceEEEEEEcCCCCc--eEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCC-------------
Confidence 467899999975322211 01111111111111111122223457788899999876544221111
Q ss_pred ccCCCcccccCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcch
Q 001548 300 WIGGLRQGSSDHGVNLREWLNARG----HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (1056)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~----~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgl 375 (1056)
-..+|||++|++|.++|.... ...+...++.++.||+.||.|||++||+||||||+||+++.++.+|++|||+
T Consensus 70 ---~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~ 146 (269)
T cd05087 70 ---YLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGL 146 (269)
T ss_pred ---cEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccc
Confidence 113899999999999996532 2345567889999999999999999999999999999999999999999998
Q ss_pred hhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCC
Q 001548 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1056)
Q Consensus 376 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~ 455 (1056)
++.......
T Consensus 147 ~~~~~~~~~----------------------------------------------------------------------- 155 (269)
T cd05087 147 SHNKYKEDY----------------------------------------------------------------------- 155 (269)
T ss_pred cccccCcce-----------------------------------------------------------------------
Confidence 754321000
Q ss_pred CCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCC-------CCCccchhHHHHHHHHHHhC-
Q 001548 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-------VCTTSSNIYSLGVLFFELFG- 527 (1056)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-------~~t~~sDIwSLGvlL~eLlt- 527 (1056)
........++..|+|||++.+. .++.++|||||||++|||++
T Consensus 156 ------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~ 205 (269)
T cd05087 156 ------------------------------YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFEL 205 (269)
T ss_pred ------------------------------eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhC
Confidence 0000134567789999998642 35789999999999999985
Q ss_pred C---CCcHHHHHHHHHhhcc---CCCCCC-CCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001548 528 R---FDSERALAAAMSDLRD---RILPPS-FLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1056)
Q Consensus 528 ~---f~~~~~~~~~~~~~~~---~~lp~~-~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~ 581 (1056)
| |............... ....+. ....++.+.+++..|+ .+|.+|||+.+|+.
T Consensus 206 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 206 GSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred CCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 5 3322222221111111 111122 2245677889999998 68999999999985
No 340
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.93 E-value=5.2e-26 Score=259.86 Aligned_cols=186 Identities=18% Similarity=0.252 Sum_probs=137.6
Q ss_pred ccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccC
Q 001548 306 QGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASL 385 (1056)
Q Consensus 306 ~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~ 385 (1056)
.|+++ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++........
T Consensus 84 ~~e~~-~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~ 161 (332)
T cd07857 84 YEELM-EADLHQIIRSG-QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGE 161 (332)
T ss_pred EEecc-cCCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceeccccccc
Confidence 45555 46999999654 35777799999999999999999999999999999999999999999999998765411000
Q ss_pred CCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccC
Q 001548 386 DIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNA 465 (1056)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~ 465 (1056)
T Consensus 162 -------------------------------------------------------------------------------- 161 (332)
T cd07857 162 -------------------------------------------------------------------------------- 161 (332)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCccccccccccccccccccCCCccCcccccC-CCCCccchhHHHHHHHHHHhCCC---CcHHH---HHHH
Q 001548 466 GFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGRF---DSERA---LAAA 538 (1056)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~t~~sDIwSLGvlL~eLlt~f---~~~~~---~~~~ 538 (1056)
........+||..|+|||++.+ ..++.++|||||||++|+|+++. ..... ....
T Consensus 162 -------------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~ 222 (332)
T cd07857 162 -------------------NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQI 222 (332)
T ss_pred -------------------ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHH
Confidence 0001114578999999998876 56899999999999999999863 22111 1100
Q ss_pred HHhh--------------------------ccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhhhc
Q 001548 539 MSDL--------------------------RDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (1056)
Q Consensus 539 ~~~~--------------------------~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~~~ 592 (1056)
+..+ ....++......++.+.+|+.+||++||.+|||+.+++.|||+....++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~~~~ 302 (332)
T cd07857 223 LQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHDPD 302 (332)
T ss_pred HHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhcCcc
Confidence 0000 00011122234577889999999999999999999999999998776543
No 341
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.93 E-value=9.9e-26 Score=249.45 Aligned_cols=198 Identities=17% Similarity=0.137 Sum_probs=145.0
Q ss_pred hhhccC-CCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC---------------CCCC
Q 001548 264 MMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------------HKGK 327 (1056)
Q Consensus 264 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~---------------~~~~ 327 (1056)
..+... .|||++.+......+..+ ..+|+|+.+++|.++|.... ..++
T Consensus 47 ~~l~~l~~h~~iv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~ 110 (270)
T cd05047 47 EVLCKLGHHPNIINLLGACEHRGYL----------------YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 110 (270)
T ss_pred HHHHhhccCCCeeeEEEEEecCCCc----------------eEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCC
Confidence 344455 799998866553322111 13899999999999996543 2356
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccc
Q 001548 328 RIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTT 407 (1056)
Q Consensus 328 ~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (1056)
...++.++.||+.||+|||+.||+||||||+||+++.++.+|++|||+++..... ..
T Consensus 111 ~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~------------~~----------- 167 (270)
T cd05047 111 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY------------VK----------- 167 (270)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCccccchh------------hh-----------
Confidence 7789999999999999999999999999999999999999999999987532100 00
Q ss_pred cccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccc
Q 001548 408 GIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQST 487 (1056)
Q Consensus 408 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (1056)
T Consensus 168 -------------------------------------------------------------------------------- 167 (270)
T cd05047 168 -------------------------------------------------------------------------------- 167 (270)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHH
Q 001548 488 SVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCL 563 (1056)
Q Consensus 488 ~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~ 563 (1056)
. .....+..|+|||++.+..++.++|||||||++|||++ + |.... .......+.....++.....+..+.+|+.
T Consensus 168 ~-~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 245 (270)
T cd05047 168 K-TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-CAELYEKLPQGYRLEKPLNCDDEVYDLMR 245 (270)
T ss_pred c-cCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccC-HHHHHHHHhCCCCCCCCCcCCHHHHHHHH
Confidence 0 01122456999999988889999999999999999996 4 32211 11222223222222333456778899999
Q ss_pred hccccCCCCCCCHHHHhhh
Q 001548 564 WQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 564 ~lL~~dP~~Rpt~~eil~~ 582 (1056)
+||+.||.+||++.+++..
T Consensus 246 ~~l~~~p~~Rps~~~il~~ 264 (270)
T cd05047 246 QCWREKPYERPSFAQILVS 264 (270)
T ss_pred HHcccChhhCCCHHHHHHH
Confidence 9999999999999999874
No 342
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93 E-value=9e-26 Score=254.84 Aligned_cols=201 Identities=17% Similarity=0.175 Sum_probs=148.6
Q ss_pred hhccC-CCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC---------------CCCCH
Q 001548 265 MVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------------HKGKR 328 (1056)
Q Consensus 265 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~---------------~~~~~ 328 (1056)
++... .|||++.+......+... ..+|+|+.+++|.++|.... ..++.
T Consensus 76 ~l~~l~~h~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~ 139 (307)
T cd05098 76 MMKMIGKHKNIINLLGACTQDGPL----------------YVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSF 139 (307)
T ss_pred HHHHhcCCCCEeeEEEEEecCCce----------------EEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCH
Confidence 34444 799998766553322111 13899999999999997643 23666
Q ss_pred HHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccc
Q 001548 329 IECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTG 408 (1056)
Q Consensus 329 ~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (1056)
.+++.++.||+.||+|||++||+||||||+||+++.++.+|++|||+++........
T Consensus 140 ~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~----------------------- 196 (307)
T cd05098 140 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY----------------------- 196 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCcccccccccchh-----------------------
Confidence 789999999999999999999999999999999999999999999988654310000
Q ss_pred ccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCcccccccccccc
Q 001548 409 IASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTS 488 (1056)
Q Consensus 409 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (1056)
..
T Consensus 197 ------------------------------------------------------------------------------~~ 198 (307)
T cd05098 197 ------------------------------------------------------------------------------KK 198 (307)
T ss_pred ------------------------------------------------------------------------------hc
Confidence 00
Q ss_pred ccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHh
Q 001548 489 VSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLW 564 (1056)
Q Consensus 489 ~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~ 564 (1056)
.+...++..|+|||.+.+..++.++|||||||++|||++ + |.. .........+.....++.....+..+.+|+.+
T Consensus 199 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 277 (307)
T cd05098 199 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLKEGHRMDKPSNCTNELYMMMRD 277 (307)
T ss_pred cccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCc-CCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHH
Confidence 001223456999999999889999999999999999997 4 322 22223333333443334444567889999999
Q ss_pred ccccCCCCCCCHHHHhhhh
Q 001548 565 QLHPEPLSRPTTREILQSE 583 (1056)
Q Consensus 565 lL~~dP~~Rpt~~eil~~~ 583 (1056)
||+.+|.+||++.+++++.
T Consensus 278 ~l~~~p~~Rps~~evl~~l 296 (307)
T cd05098 278 CWHAVPSQRPTFKQLVEDL 296 (307)
T ss_pred HcccChhhCcCHHHHHHHH
Confidence 9999999999999998753
No 343
>PTZ00420 coronin; Provisional
Probab=99.93 E-value=9.7e-24 Score=251.26 Aligned_cols=230 Identities=16% Similarity=0.180 Sum_probs=178.7
Q ss_pred EEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCc--------eEEEE
Q 001548 796 AAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQ--------TVSHY 867 (1056)
Q Consensus 796 tg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~--------~v~~~ 867 (1056)
+||.++.|++|+..+. .......+|.+.|.+++|+|..+++|+||+.||+|+|||+.++. ++..+
T Consensus 49 gGG~~gvI~L~~~~r~-------~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L 121 (568)
T PTZ00420 49 GGGLIGAIRLENQMRK-------PPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCIL 121 (568)
T ss_pred CCCceeEEEeeecCCC-------ceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEe
Confidence 3677899999997641 22334568999999999999767899999999999999997642 34577
Q ss_pred ecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEeCCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCC
Q 001548 868 IEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNAR 947 (1056)
Q Consensus 868 ~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~ 947 (1056)
.+|...|++++|+|....+|+||+.|++|+|||+++++.+..+.+...|.+++|+|+|. +|++++.|+.|++||+|++.
T Consensus 122 ~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~SlswspdG~-lLat~s~D~~IrIwD~Rsg~ 200 (568)
T PTZ00420 122 KGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIKGN-LLSGTCVGKHMHIIDPRKQE 200 (568)
T ss_pred ecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCCCC-EEEEEecCCEEEEEECCCCc
Confidence 89999999999999433456899999999999999999888888778899999999997 88999999999999999987
Q ss_pred cceEEecCCCCCeEEE-----EEc-CCCEEEEEECCC----eEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCC
Q 001548 948 APWCVLAGHEKAVSYV-----KFL-DSGTLVTASTDN----KLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEH 1017 (1056)
Q Consensus 948 ~~~~~l~gH~~~V~~l-----~fs-~~~~L~SgS~Dg----~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~ 1017 (1056)
. +..+.+|.+.+... .|+ ++++|+|++.|+ +|+|||++.. +.++.++..+.. ...+.
T Consensus 201 ~-i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~-------~~pl~~~~ld~~-~~~L~---- 267 (568)
T PTZ00420 201 I-ASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNT-------TSALVTMSIDNA-SAPLI---- 267 (568)
T ss_pred E-EEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCC-------CCceEEEEecCC-ccceE----
Confidence 5 57788998865433 344 567899888774 7999999842 234444332221 11111
Q ss_pred cceeeEEeeCCCCEEEEEEcCCcEEEEeCCCCe
Q 001548 1018 NLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWGC 1050 (1056)
Q Consensus 1018 ~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~~ 1050 (1056)
.....+++..+++|+.|++|++|++..+.
T Consensus 268 ----p~~D~~tg~l~lsGkGD~tIr~~e~~~~~ 296 (568)
T PTZ00420 268 ----PHYDESTGLIYLIGKGDGNCRYYQHSLGS 296 (568)
T ss_pred ----EeeeCCCCCEEEEEECCCeEEEEEccCCc
Confidence 11235568888999999999999997764
No 344
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.93 E-value=6e-26 Score=254.03 Aligned_cols=202 Identities=15% Similarity=0.131 Sum_probs=156.2
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....||||+.+......... -..+|+++.|++|.+++...+ .+++..++.++.||+.||
T Consensus 52 ~~~l~~l~h~~i~~~~~~~~~~~~----------------~~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qil~~l 114 (290)
T cd05580 52 KRILQSIRHPFLVNLYGSFQDDSN----------------LYLVMEYVPGGELFSHLRKSG-RFPEPVARFYAAQVVLAL 114 (290)
T ss_pred HHHHHhCCCCCccceeeEEEcCCe----------------EEEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHH
Confidence 456777789999976654322111 124899999999999997764 467779999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+|+||||+||+++.++.+|++|||+++.....
T Consensus 115 ~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~---------------------------------------- 154 (290)
T cd05580 115 EYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR---------------------------------------- 154 (290)
T ss_pred HHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC----------------------------------------
Confidence 9999999999999999999999999999999987654310
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.....|++.|+|||
T Consensus 155 ------------------------------------------------------------------~~~~~~~~~y~aPE 168 (290)
T cd05580 155 ------------------------------------------------------------------TYTLCGTPEYLAPE 168 (290)
T ss_pred ------------------------------------------------------------------CCCCCCCccccChh
Confidence 00345788899999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCC-----
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP----- 574 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rp----- 574 (1056)
.+.+..++.++|||||||++|+|+++ |................ ++.....++.+.+++.+||..||.+|+
T Consensus 169 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~ 246 (290)
T cd05580 169 IILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGK--VRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKN 246 (290)
T ss_pred hhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--ccCCccCCHHHHHHHHHHccCCHHHccCcccC
Confidence 99888899999999999999999986 33322222222222211 122234578899999999999999999
Q ss_pred CHHHHhhhhhhhhhh
Q 001548 575 TTREILQSEVTNEFQ 589 (1056)
Q Consensus 575 t~~eil~~~~~~~~~ 589 (1056)
+++|+++||||....
T Consensus 247 ~~~~l~~~~~~~~~~ 261 (290)
T cd05580 247 GVNDIKNHPWFAGID 261 (290)
T ss_pred CHHHHHcCcccccCC
Confidence 999999999997754
No 345
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.93 E-value=1e-25 Score=251.70 Aligned_cols=201 Identities=16% Similarity=0.112 Sum_probs=148.8
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC-------------------
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG------------------- 323 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~------------------- 323 (1056)
..+++...|||++.+......+.. ...+++++.|++|.+++....
T Consensus 59 i~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 122 (288)
T cd05050 59 AALMAEFDHPNIVKLLGVCAVGKP----------------MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGL 122 (288)
T ss_pred HHHHHhcCCCchheEEEEEcCCCc----------------cEEEEecCCCCCHHHHHHHcCccccccccccccccccccc
Confidence 456777789999976554321111 124899999999999996432
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccc
Q 001548 324 --HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAE 401 (1056)
Q Consensus 324 --~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (1056)
..++...++.++.||+.||+|||++||+||||||+||+++.++.+|++|||+++........
T Consensus 123 ~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~---------------- 186 (288)
T cd05050 123 NPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY---------------- 186 (288)
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCccc----------------
Confidence 23566788999999999999999999999999999999999999999999988654310000
Q ss_pred cccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccc
Q 001548 402 EEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNT 481 (1056)
Q Consensus 402 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (1056)
T Consensus 187 -------------------------------------------------------------------------------- 186 (288)
T cd05050 187 -------------------------------------------------------------------------------- 186 (288)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChh
Q 001548 482 AQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPK 557 (1056)
Q Consensus 482 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~ 557 (1056)
........+..|+|||.+.+..++.++|||||||++|||++ + |.+.. .......+.....++.....++.
T Consensus 187 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 260 (288)
T cd05050 187 -----KASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMA-HEEVIYYVRDGNVLSCPDNCPLE 260 (288)
T ss_pred -----cccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHhcCCCCCCCCCCCHH
Confidence 00001223456999999998899999999999999999996 4 32222 22333334444444444456788
Q ss_pred HHHHHHhccccCCCCCCCHHHHhh
Q 001548 558 EAGFCLWQLHPEPLSRPTTREILQ 581 (1056)
Q Consensus 558 ~~~li~~lL~~dP~~Rpt~~eil~ 581 (1056)
+.+|+.+||+.+|.+|||+.|+++
T Consensus 261 l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 261 LYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHHHHHHHcccCcccCCCHHHHHH
Confidence 999999999999999999999876
No 346
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.93 E-value=6.2e-26 Score=249.22 Aligned_cols=198 Identities=18% Similarity=0.165 Sum_probs=150.2
Q ss_pred hccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHh
Q 001548 266 VASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYH 345 (1056)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~yl 345 (1056)
.....|||++.+......+.. ....+||++|++|.++++..+ .+++..+..++.||+.||.||
T Consensus 51 ~~~~~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~l 113 (260)
T cd05611 51 MIQGESPYVAKLYYSFQSKDY----------------LYLVMEYLNGGDCASLIKTLG-GLPEDWAKQYIAEVVLGVEDL 113 (260)
T ss_pred hhcCCCCCeeeeeeeEEcCCe----------------EEEEEeccCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH
Confidence 445578998876555322111 124899999999999997654 467779999999999999999
Q ss_pred hhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccc
Q 001548 346 HTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSR 425 (1056)
Q Consensus 346 Hs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~ 425 (1056)
|+.||+|+||+|+||+++.++.+|++|||+++....
T Consensus 114 H~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-------------------------------------------- 149 (260)
T cd05611 114 HQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-------------------------------------------- 149 (260)
T ss_pred HHCCeecCCCCHHHeEECCCCcEEEeecccceeccc--------------------------------------------
Confidence 999999999999999999999999999998754320
Q ss_pred cccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCccccc
Q 001548 426 WWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS 505 (1056)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~ 505 (1056)
.....|+..|+|||.+.
T Consensus 150 ---------------------------------------------------------------~~~~~~~~~y~~pe~~~ 166 (260)
T cd05611 150 ---------------------------------------------------------------NKKFVGTPDYLAPETIL 166 (260)
T ss_pred ---------------------------------------------------------------cccCCCCcCccChhhhc
Confidence 00234677799999999
Q ss_pred CCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhcc--CCCCC-CCCCCChhHHHHHHhccccCCCCCCCH---
Q 001548 506 GGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRD--RILPP-SFLSENPKEAGFCLWQLHPEPLSRPTT--- 576 (1056)
Q Consensus 506 ~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~--~~lp~-~~~~~~~~~~~li~~lL~~dP~~Rpt~--- 576 (1056)
+..++.++|||||||++|+|++| |....... ....+.. ...++ .....++.+.+||.+||+++|+.||++
T Consensus 167 ~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~ 245 (260)
T cd05611 167 GVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA-VFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGY 245 (260)
T ss_pred CCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcH
Confidence 88899999999999999999986 33322222 1122211 11222 223567889999999999999999955
Q ss_pred HHHhhhhhhhhh
Q 001548 577 REILQSEVTNEF 588 (1056)
Q Consensus 577 ~eil~~~~~~~~ 588 (1056)
.|++.||||...
T Consensus 246 ~~~l~~~~~~~~ 257 (260)
T cd05611 246 QEIKSHPFFKSI 257 (260)
T ss_pred HHHHcChHhhcC
Confidence 799999999764
No 347
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.93 E-value=5.8e-26 Score=249.45 Aligned_cols=201 Identities=19% Similarity=0.228 Sum_probs=152.3
Q ss_pred hhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHH
Q 001548 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVA 340 (1056)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~QIl~ 340 (1056)
.+++...|||++.+........ . ...+++|+.|++|.+++.. .+..+++..++.++.||+.
T Consensus 54 ~~l~~l~h~~i~~~~~~~~~~~---------~-------~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 117 (260)
T cd08222 54 QLLSKLDHPAIVKFHASFLERD---------A-------FCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLL 117 (260)
T ss_pred HHHHhCCCCcHHHHHHHHhcCC---------c-------eEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHH
Confidence 4667778999987544322111 0 1248899999999998854 3456888899999999999
Q ss_pred HHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccc
Q 001548 341 LVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (1056)
Q Consensus 341 gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 420 (1056)
||.|||++||+|+||||+||+++ ++.+|++|||+++.......
T Consensus 118 ~l~~lH~~~i~h~~l~~~nili~-~~~~~l~d~g~~~~~~~~~~------------------------------------ 160 (260)
T cd08222 118 GVHYMHQRRILHRDLKAKNIFLK-NNLLKIGDFGVSRLLMGSCD------------------------------------ 160 (260)
T ss_pred HHHHHHHcCccccCCChhheEee-cCCEeecccCceeecCCCcc------------------------------------
Confidence 99999999999999999999996 47799999998865431000
Q ss_pred ccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccC
Q 001548 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (1056)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 500 (1056)
......|++.|+|
T Consensus 161 -------------------------------------------------------------------~~~~~~~~~~~~~ 173 (260)
T cd08222 161 -------------------------------------------------------------------LATTFTGTPYYMS 173 (260)
T ss_pred -------------------------------------------------------------------cccCCCCCcCccC
Confidence 0002346778999
Q ss_pred cccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHH
Q 001548 501 PEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTR 577 (1056)
Q Consensus 501 PE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~ 577 (1056)
||.+.+..++.++|+||||+++|+|+++ |.......... .+.....+......++.+.+|+.+||..+|++||++.
T Consensus 174 pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ 252 (260)
T cd08222 174 PEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVL-RIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAA 252 (260)
T ss_pred HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHH-HHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHH
Confidence 9999888889999999999999999985 44333333222 3333334444445677889999999999999999999
Q ss_pred HHhhhhhh
Q 001548 578 EILQSEVT 585 (1056)
Q Consensus 578 eil~~~~~ 585 (1056)
++++||||
T Consensus 253 ~il~~~~~ 260 (260)
T cd08222 253 EILRNPFI 260 (260)
T ss_pred HHhhCCCC
Confidence 99999997
No 348
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.93 E-value=1.4e-25 Score=248.08 Aligned_cols=202 Identities=16% Similarity=0.110 Sum_probs=143.1
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---HKGKRIECLYIFRQIV 339 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~---~~~~~~~~~~i~~QIl 339 (1056)
...++...|||++.+.......... ..+|||++|++|.+++.... ...+...++.++.||+
T Consensus 46 ~~~~~~l~h~~iv~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~ 109 (268)
T cd05086 46 GDPYRILQHPNILQCLGQCVEAIPY----------------LLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIA 109 (268)
T ss_pred HHHHhccCCcchhheEEEecCCCcc----------------EEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHH
Confidence 3456778999999876653321111 24899999999999997642 2355557789999999
Q ss_pred HHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccc
Q 001548 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (1056)
Q Consensus 340 ~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 419 (1056)
.||+|||+++|+||||||+|||++.++.+|++|||++........
T Consensus 110 ~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~----------------------------------- 154 (268)
T cd05086 110 AGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY----------------------------------- 154 (268)
T ss_pred HHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchh-----------------------------------
Confidence 999999999999999999999999999999999998754220000
Q ss_pred cccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCcc
Q 001548 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (1056)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 499 (1056)
........++..|+
T Consensus 155 ------------------------------------------------------------------~~~~~~~~~~~~y~ 168 (268)
T cd05086 155 ------------------------------------------------------------------IETEDDKCVPLRWL 168 (268)
T ss_pred ------------------------------------------------------------------hhcccCCcCccccc
Confidence 00001345778899
Q ss_pred CcccccC-------CCCCccchhHHHHHHHHHHhCC----CCcHHHHHHHHHhhccC---CC-CCCCCCCChhHHHHHHh
Q 001548 500 SPEELSG-------GVCTTSSNIYSLGVLFFELFGR----FDSERALAAAMSDLRDR---IL-PPSFLSENPKEAGFCLW 564 (1056)
Q Consensus 500 APE~l~~-------~~~t~~sDIwSLGvlL~eLlt~----f~~~~~~~~~~~~~~~~---~l-p~~~~~~~~~~~~li~~ 564 (1056)
|||++.. ..++.++|||||||++|||+++ |............+... .+ |......++.+.+++..
T Consensus 169 aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 248 (268)
T cd05086 169 APELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQF 248 (268)
T ss_pred CchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHH
Confidence 9999853 2457899999999999999852 33322222222222221 11 22223457788899999
Q ss_pred ccccCCCCCCCHHHHhhh
Q 001548 565 QLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 565 lL~~dP~~Rpt~~eil~~ 582 (1056)
|| .+|.+||++.+|++-
T Consensus 249 c~-~~P~~Rp~~~~i~~~ 265 (268)
T cd05086 249 CW-LSPEKRATAEEVHRL 265 (268)
T ss_pred Hh-hCcccCCCHHHHHHH
Confidence 99 679999999999763
No 349
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.93 E-value=1.1e-25 Score=248.60 Aligned_cols=204 Identities=12% Similarity=0.131 Sum_probs=150.7
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....|||++.+......+... ..+|++++|++|.+++......++..+++.++.||+.||
T Consensus 56 ~~~l~~l~h~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l 119 (267)
T cd05066 56 ASIMGQFDHPNIIHLEGVVTKSKPV----------------MIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGM 119 (267)
T ss_pred HHHHHhCCCCCcceEEEEEecCCcc----------------EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 3466777899999865543211111 138999999999999987666678889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+|||++.++.+|++|||+++........
T Consensus 120 ~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~------------------------------------- 162 (267)
T cd05066 120 KYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA------------------------------------- 162 (267)
T ss_pred HHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccce-------------------------------------
Confidence 9999999999999999999999999999999988765410000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
........++..|+|||
T Consensus 163 ---------------------------------------------------------------~~~~~~~~~~~~y~~pe 179 (267)
T cd05066 163 ---------------------------------------------------------------AYTTRGGKIPIRWTAPE 179 (267)
T ss_pred ---------------------------------------------------------------eeecCCCccceeecCHh
Confidence 00000122356799999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhC-CCCcHHH--HHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFG-RFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt-~f~~~~~--~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~ei 579 (1056)
.+.+..++.++|+|||||++|||++ +..++.. .......+.....++.....++.+.+++.+||+++|.+||++.++
T Consensus 180 ~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i 259 (267)
T cd05066 180 AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQI 259 (267)
T ss_pred HhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHH
Confidence 9998889999999999999999885 5322211 111222223332334444567889999999999999999999999
Q ss_pred hhh
Q 001548 580 LQS 582 (1056)
Q Consensus 580 l~~ 582 (1056)
++-
T Consensus 260 ~~~ 262 (267)
T cd05066 260 VSI 262 (267)
T ss_pred HHH
Confidence 863
No 350
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.93 E-value=1.4e-25 Score=251.70 Aligned_cols=202 Identities=14% Similarity=0.121 Sum_probs=147.6
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC-----------CCCCHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-----------HKGKRIEC 331 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-----------~~~~~~~~ 331 (1056)
...+....|||++.+......+... ..+|||+.|++|.+++.... ..++...+
T Consensus 68 i~~l~~l~h~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 131 (295)
T cd05097 68 IKIMSRLKNPNIIRLLGVCVSDDPL----------------CMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANL 131 (295)
T ss_pred HHHHHhCCCCCcCeEEEEEcCCCcc----------------EEEEecCCCCcHHHHHHhccccccccccccCCcccHHHH
Confidence 4567788999999876654322211 13899999999999996532 13566788
Q ss_pred HHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccc
Q 001548 332 LYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIAS 411 (1056)
Q Consensus 332 ~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (1056)
+.++.||+.||.|||++||+||||||+||+++.++.+|++|||+++.......
T Consensus 132 ~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~--------------------------- 184 (295)
T cd05097 132 LYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDY--------------------------- 184 (295)
T ss_pred HHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCcEEecccccccccccCcc---------------------------
Confidence 99999999999999999999999999999999999999999998865431000
Q ss_pred cccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccc
Q 001548 412 AKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSE 491 (1056)
Q Consensus 412 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (1056)
......
T Consensus 185 --------------------------------------------------------------------------~~~~~~ 190 (295)
T cd05097 185 --------------------------------------------------------------------------YRIQGR 190 (295)
T ss_pred --------------------------------------------------------------------------eeccCc
Confidence 000002
Q ss_pred cccCCCccCcccccCCCCCccchhHHHHHHHHHHhCC-----CCcHHHHHH---HHH---hhccCCCCCCCCCCChhHHH
Q 001548 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR-----FDSERALAA---AMS---DLRDRILPPSFLSENPKEAG 560 (1056)
Q Consensus 492 ~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~-----f~~~~~~~~---~~~---~~~~~~lp~~~~~~~~~~~~ 560 (1056)
..++..|+|||++.+..++.++|||||||++|||++. |........ ... ..............++.+.+
T Consensus 191 ~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 270 (295)
T cd05097 191 AVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFK 270 (295)
T ss_pred CcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHH
Confidence 3456679999999988899999999999999999862 332211111 111 11111222333345788999
Q ss_pred HHHhccccCCCCCCCHHHHhh
Q 001548 561 FCLWQLHPEPLSRPTTREILQ 581 (1056)
Q Consensus 561 li~~lL~~dP~~Rpt~~eil~ 581 (1056)
|+.+||..||.+||++.+|++
T Consensus 271 li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 271 LMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred HHHHHcCCCchhCcCHHHHHH
Confidence 999999999999999999976
No 351
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93 E-value=1.2e-25 Score=254.59 Aligned_cols=202 Identities=16% Similarity=0.152 Sum_probs=147.6
Q ss_pred hhhhccC-CCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC---------------CCC
Q 001548 263 AMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------------HKG 326 (1056)
Q Consensus 263 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~---------------~~~ 326 (1056)
..++... .||||+.+......+.. ...+|+|+.|++|.++|.... ..+
T Consensus 68 ~~~l~~l~~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l 131 (314)
T cd05099 68 MELMKLIGKHKNIINLLGVCTQEGP----------------LYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQL 131 (314)
T ss_pred HHHHHhccCCCCeeeEEEEEccCCc----------------eEEEEecCCCCcHHHHHHhcCCCcccccccccCCccccc
Confidence 4456666 69999987654322111 113899999999999996642 246
Q ss_pred CHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccc
Q 001548 327 KRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFT 406 (1056)
Q Consensus 327 ~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (1056)
+...++.++.||+.||.|||++||+||||||+|||++.++.+|++|||+++........
T Consensus 132 ~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~--------------------- 190 (314)
T cd05099 132 SFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYY--------------------- 190 (314)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEccccccccccccccc---------------------
Confidence 77788999999999999999999999999999999999999999999998765410000
Q ss_pred ccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCcccccccccc
Q 001548 407 TGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQS 486 (1056)
Q Consensus 407 ~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (1056)
T Consensus 191 -------------------------------------------------------------------------------- 190 (314)
T cd05099 191 -------------------------------------------------------------------------------- 190 (314)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHH
Q 001548 487 TSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFC 562 (1056)
Q Consensus 487 ~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li 562 (1056)
.......++..|+|||++.+..++.++|||||||++|||++ + |..... ......+.....++.....+.++.+|+
T Consensus 191 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li 269 (314)
T cd05099 191 KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV-EELFKLLREGHRMDKPSNCTHELYMLM 269 (314)
T ss_pred cccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence 00001123456999999999889999999999999999997 4 332211 122222233322333345677899999
Q ss_pred HhccccCCCCCCCHHHHhhh
Q 001548 563 LWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 563 ~~lL~~dP~~Rpt~~eil~~ 582 (1056)
.+||..+|.+||++.++++.
T Consensus 270 ~~cl~~~p~~Rps~~~ll~~ 289 (314)
T cd05099 270 RECWHAVPTQRPTFKQLVEA 289 (314)
T ss_pred HHHcCCCcccCcCHHHHHHH
Confidence 99999999999999999863
No 352
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.93 E-value=1.1e-25 Score=251.01 Aligned_cols=205 Identities=18% Similarity=0.234 Sum_probs=156.8
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...++...|+|++.+......+... ..++++++|++|.+++......++...+..++.||+.||
T Consensus 66 ~~~l~~l~~~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L 129 (286)
T cd06614 66 ILIMKDCKHPNIVDYYDSYLVGDEL----------------WVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGL 129 (286)
T ss_pred HHHHHHCCCCCeeEEEEEEEECCEE----------------EEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHH
Confidence 3467777899998766654432211 138899999999999987665678889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||+.||+|+||||+||+++.++.++|+|||++.......
T Consensus 130 ~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~--------------------------------------- 170 (286)
T cd06614 130 EYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK--------------------------------------- 170 (286)
T ss_pred HHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccch---------------------------------------
Confidence 99999999999999999999999999999999875533100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......++..|+|||
T Consensus 171 ----------------------------------------------------------------~~~~~~~~~~~y~~PE 186 (286)
T cd06614 171 ----------------------------------------------------------------SKRNSVVGTPYWMAPE 186 (286)
T ss_pred ----------------------------------------------------------------hhhccccCCcccCCHh
Confidence 0001335678899999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCCCC---cHHHHHHHHHhhccCCCCC--CCCCCChhHHHHHHhccccCCCCCCCHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGRFD---SERALAAAMSDLRDRILPP--SFLSENPKEAGFCLWQLHPEPLSRPTTR 577 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~f~---~~~~~~~~~~~~~~~~lp~--~~~~~~~~~~~li~~lL~~dP~~Rpt~~ 577 (1056)
.+.+..++.++|+|||||++|+|++|.. ............ ....++ .....+..+.+|+.+||+++|.+||++.
T Consensus 187 ~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~ 265 (286)
T cd06614 187 VIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLIT-TKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAE 265 (286)
T ss_pred HhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-hcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHH
Confidence 9998889999999999999999998632 222222222221 222222 1223567889999999999999999999
Q ss_pred HHhhhhhhhh
Q 001548 578 EILQSEVTNE 587 (1056)
Q Consensus 578 eil~~~~~~~ 587 (1056)
+++.|+||..
T Consensus 266 ~il~~~~~~~ 275 (286)
T cd06614 266 ELLQHPFLKK 275 (286)
T ss_pred HHhhChHhhc
Confidence 9999999987
No 353
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.93 E-value=9.5e-26 Score=251.50 Aligned_cols=204 Identities=18% Similarity=0.127 Sum_probs=153.7
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....|||++.+.......... ..+++|++|++|.+++...+ .++...++.++.|++.||
T Consensus 54 ~~~l~~l~h~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l 116 (284)
T cd06620 54 LQIMHECRSPYIVSFYGAFLNENNI----------------CMCMEFMDCGSLDRIYKKGG-PIPVEILGKIAVAVVEGL 116 (284)
T ss_pred HHHHHHcCCCCcceEeeeEecCCEE----------------EEEEecCCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHH
Confidence 4456777899999876654432111 24899999999999997654 467779999999999999
Q ss_pred HHhhh-cCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 343 DYHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 343 ~ylHs-~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
.|||+ .||+||||||+||+++.++.++++|||++.......
T Consensus 117 ~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~-------------------------------------- 158 (284)
T cd06620 117 TYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI-------------------------------------- 158 (284)
T ss_pred HHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc--------------------------------------
Confidence 99997 699999999999999999999999999875432100
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
....+||..|+||
T Consensus 159 -------------------------------------------------------------------~~~~~~~~~~~aP 171 (284)
T cd06620 159 -------------------------------------------------------------------ADTFVGTSTYMSP 171 (284)
T ss_pred -------------------------------------------------------------------cCccccCcccCCH
Confidence 0034578889999
Q ss_pred ccccCCCCCccchhHHHHHHHHHHhCCCCcH---HH----------HHHHHHhhccCCCCCCCC-CCChhHHHHHHhccc
Q 001548 502 EELSGGVCTTSSNIYSLGVLFFELFGRFDSE---RA----------LAAAMSDLRDRILPPSFL-SENPKEAGFCLWQLH 567 (1056)
Q Consensus 502 E~l~~~~~t~~sDIwSLGvlL~eLlt~f~~~---~~----------~~~~~~~~~~~~lp~~~~-~~~~~~~~li~~lL~ 567 (1056)
|++.+..++.++|||||||++|+|+++..++ .. .......+.....+.... ..++.+.+|+.+||+
T Consensus 172 E~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 251 (284)
T cd06620 172 ERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLL 251 (284)
T ss_pred HHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhc
Confidence 9998888999999999999999999863322 11 011122222221221111 256778899999999
Q ss_pred cCCCCCCCHHHHhhhhhhhhh
Q 001548 568 PEPLSRPTTREILQSEVTNEF 588 (1056)
Q Consensus 568 ~dP~~Rpt~~eil~~~~~~~~ 588 (1056)
+||.+|||+.|+++|+||...
T Consensus 252 ~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 252 KDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred CCcccCcCHHHHhcCcccccc
Confidence 999999999999999998664
No 354
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.93 E-value=4.1e-26 Score=254.15 Aligned_cols=203 Identities=16% Similarity=0.198 Sum_probs=150.3
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++....|||++.+......+.. ...+++|++|++|.+++...+ .++...++.++.||+.||
T Consensus 51 ~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l 113 (286)
T cd07846 51 IRMLKQLRHENLVNLIEVFRRKKR----------------LYLVFEFVDHTVLDDLEKYPN-GLDESRVRKYLFQILRGI 113 (286)
T ss_pred HHHHHhcCCcchhhHHHhcccCCe----------------EEEEEecCCccHHHHHHhccC-CCCHHHHHHHHHHHHHHH
Confidence 456777889999876555321111 124889999999998876543 377889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+|+||+|+||+++.++.++++|||++.......
T Consensus 114 ~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~--------------------------------------- 154 (286)
T cd07846 114 EFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG--------------------------------------- 154 (286)
T ss_pred HHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc---------------------------------------
Confidence 99999999999999999999999999999999886543100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
...+...++.+|+|||
T Consensus 155 ----------------------------------------------------------------~~~~~~~~~~~y~aPE 170 (286)
T cd07846 155 ----------------------------------------------------------------EVYTDYVATRWYRAPE 170 (286)
T ss_pred ----------------------------------------------------------------cccCcccceeeccCcH
Confidence 0011346788999999
Q ss_pred cccC-CCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhc--------------------cCCCC---------C
Q 001548 503 ELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLR--------------------DRILP---------P 549 (1056)
Q Consensus 503 ~l~~-~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~--------------------~~~lp---------~ 549 (1056)
++.+ ..++.++|||||||++|||++| |.............. ....+ .
T Consensus 171 ~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (286)
T cd07846 171 LLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEK 250 (286)
T ss_pred HhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHH
Confidence 9876 4478999999999999999986 332222111111000 00011 1
Q ss_pred CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 550 ~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
.++..+..+.+|+.+||+++|.+||++.++++||||
T Consensus 251 ~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 251 RFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred hCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 123456778999999999999999999999999997
No 355
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.93 E-value=1.6e-25 Score=246.20 Aligned_cols=236 Identities=15% Similarity=0.065 Sum_probs=163.4
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCccc
Q 001548 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1056)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1056)
.+|.|.||++...+...+ ..+.......... .-......+....|||++.+......+..
T Consensus 16 ~g~~~~v~~~~~~~~~~v-----~iK~~~~~~~~~~--~~~~e~~~l~~l~h~~i~~~~~~~~~~~~------------- 75 (261)
T cd05068 16 AGQFGEVWEGLWNNTTPV-----AVKTLKPGTMDPK--DFLAEAQIMKKLRHPKLIQLYAVCTLEEP------------- 75 (261)
T ss_pred ccCCccEEEEEecCCeEE-----EEEeeCCCcccHH--HHHHHHHHHHHCCCCCccceeEEEecCCC-------------
Confidence 357799999886433222 1111111111111 11122456777789999876554222111
Q ss_pred ccCCCcccccCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhc
Q 001548 300 WIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1056)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~ 378 (1056)
-..+|++++|++|.+++.... ..++...+..++.||+.||.|||++||+||||||+||+++.++.+|++|||+++.
T Consensus 76 ---~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~ 152 (261)
T cd05068 76 ---IYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARV 152 (261)
T ss_pred ---eeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEE
Confidence 123799999999999996643 5678889999999999999999999999999999999999999999999999876
Q ss_pred ccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCc
Q 001548 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1056)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~ 458 (1056)
.......
T Consensus 153 ~~~~~~~------------------------------------------------------------------------- 159 (261)
T cd05068 153 IKEDIYE------------------------------------------------------------------------- 159 (261)
T ss_pred ccCCccc-------------------------------------------------------------------------
Confidence 5411000
Q ss_pred ccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHH
Q 001548 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERA 534 (1056)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~ 534 (1056)
.......+..|+|||.+.+..++.++|||||||++|||++ + |.+...
T Consensus 160 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~ 210 (261)
T cd05068 160 -----------------------------AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN 210 (261)
T ss_pred -----------------------------ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 0001112346999999998889999999999999999997 4 333222
Q ss_pred HHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001548 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1056)
Q Consensus 535 ~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~ 581 (1056)
.. ....+.....++.....+..+.+++.+||+.+|.+||++.++++
T Consensus 211 ~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 211 AE-VLQQVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred HH-HHHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 22 22222222222334456788999999999999999999999876
No 356
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.93 E-value=6e-26 Score=252.53 Aligned_cols=203 Identities=16% Similarity=0.210 Sum_probs=148.7
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG--HKGKRIECLYIFRQIVA 340 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~--~~~~~~~~~~i~~QIl~ 340 (1056)
..++....|||++.+......... ...+|++++| +|.+++...+ ..+++..++.++.||+.
T Consensus 49 ~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~ 111 (284)
T cd07836 49 ISLMKELKHENIVRLHDVIHTENK----------------LMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLK 111 (284)
T ss_pred HHHHHhhcCCCEeeeeeeEeeCCc----------------EEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHH
Confidence 456777789998876554332111 1247888886 8999987654 45788899999999999
Q ss_pred HHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccc
Q 001548 341 LVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (1056)
Q Consensus 341 gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 420 (1056)
||.|||++||+||||||+||+++.++.+|++|||+++....+.
T Consensus 112 ~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~------------------------------------- 154 (284)
T cd07836 112 GIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV------------------------------------- 154 (284)
T ss_pred HHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc-------------------------------------
Confidence 9999999999999999999999999999999999886543100
Q ss_pred ccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccC
Q 001548 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (1056)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 500 (1056)
.......+|.+|+|
T Consensus 155 ------------------------------------------------------------------~~~~~~~~~~~y~~ 168 (284)
T cd07836 155 ------------------------------------------------------------------NTFSNEVVTLWYRA 168 (284)
T ss_pred ------------------------------------------------------------------cccccccccccccC
Confidence 00013457888999
Q ss_pred cccccCC-CCCccchhHHHHHHHHHHhCCCCc---HHHHHHHHHhhc--------------c-----CCCCC--------
Q 001548 501 PEELSGG-VCTTSSNIYSLGVLFFELFGRFDS---ERALAAAMSDLR--------------D-----RILPP-------- 549 (1056)
Q Consensus 501 PE~l~~~-~~t~~sDIwSLGvlL~eLlt~f~~---~~~~~~~~~~~~--------------~-----~~lp~-------- 549 (1056)
||.+.+. .++.++|||||||++|+|+++..+ ..........+. . ...|.
T Consensus 169 PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (284)
T cd07836 169 PDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQ 248 (284)
T ss_pred hHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHH
Confidence 9998764 478999999999999999987322 211111111110 0 00000
Q ss_pred CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 550 ~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
..+..++.+.+++.+||+.||.+||++.++++||||
T Consensus 249 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 249 LFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred HhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 112446778899999999999999999999999997
No 357
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.93 E-value=1.3e-25 Score=250.15 Aligned_cols=206 Identities=17% Similarity=0.126 Sum_probs=149.3
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....|||++.+.......... . -..+++|++|++|.+++......++...++.++.||+.||
T Consensus 56 ~~~l~~l~h~~iv~~~~~~~~~~~~---------~-----~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL 121 (284)
T cd05081 56 IEILKSLQHDNIVKYKGVCYSAGRR---------N-----LRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGM 121 (284)
T ss_pred HHHHHhCCCCCeeEEEEEEccCCCC---------c-----eEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHH
Confidence 4567778999998765542211100 0 1248899999999999977655678889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+||+++.++.+||+|||+++........
T Consensus 122 ~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~------------------------------------- 164 (284)
T cd05081 122 EYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEY------------------------------------- 164 (284)
T ss_pred HHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCcc-------------------------------------
Confidence 9999999999999999999999999999999998765310000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
........++..|+|||
T Consensus 165 ---------------------------------------------------------------~~~~~~~~~~~~y~aPE 181 (284)
T cd05081 165 ---------------------------------------------------------------YKVREPGESPIFWYAPE 181 (284)
T ss_pred ---------------------------------------------------------------eeecCCCCCceEeeCHH
Confidence 00000112234599999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCCCCcH----HHH--------------HHHHHhhccCCCCCCCCCCChhHHHHHHh
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGRFDSE----RAL--------------AAAMSDLRDRILPPSFLSENPKEAGFCLW 564 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~f~~~----~~~--------------~~~~~~~~~~~lp~~~~~~~~~~~~li~~ 564 (1056)
.+.+..++.++|||||||++|||+++.... ... ......+.....++.....++.+.+|+.+
T Consensus 182 ~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 261 (284)
T cd05081 182 SLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKE 261 (284)
T ss_pred HhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHH
Confidence 999888999999999999999999742111 000 00111222223334445667889999999
Q ss_pred ccccCCCCCCCHHHHhhh
Q 001548 565 QLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 565 lL~~dP~~Rpt~~eil~~ 582 (1056)
||.++|.+|||+.+|+..
T Consensus 262 cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05081 262 CWNNDPSQRPSFSELALQ 279 (284)
T ss_pred HccCChhhCCCHHHHHHH
Confidence 999999999999999874
No 358
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.93 E-value=7.9e-26 Score=249.18 Aligned_cols=234 Identities=15% Similarity=0.069 Sum_probs=162.0
Q ss_pred cccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccc
Q 001548 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1056)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1056)
+|.|.||++...+...+ ..+....... .. ..-......+....||||+.+...... . .
T Consensus 17 g~~~~v~~~~~~~~~~v-----alK~~~~~~~-~~-~~~~~E~~~l~~l~~~~i~~~~~~~~~----~-----~------ 74 (262)
T cd05071 17 GCFGEVWMGTWNGTTRV-----AIKTLKPGTM-SP-EAFLQEAQVMKKLRHEKLVQLYAVVSE----E-----P------ 74 (262)
T ss_pred CCCCcEEEEEecCCceE-----EEEecccCcc-CH-HHHHHHHHHHHhCCCCCcceEEEEECC----C-----C------
Confidence 47799999975332111 1111111111 11 111222346667789998876443210 0 0
Q ss_pred cCCCcccccCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcc
Q 001548 301 IGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1056)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~ 379 (1056)
...+|+++.|++|.+++... +..++...++.++.||+.||.|+|++||+||||||+||+++.++.+||+|||+++..
T Consensus 75 --~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~ 152 (262)
T cd05071 75 --IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 152 (262)
T ss_pred --cEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeec
Confidence 11489999999999999753 345777789999999999999999999999999999999999999999999988654
Q ss_pred cccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcc
Q 001548 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1056)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~ 459 (1056)
......
T Consensus 153 ~~~~~~-------------------------------------------------------------------------- 158 (262)
T cd05071 153 EDNEYT-------------------------------------------------------------------------- 158 (262)
T ss_pred cccccc--------------------------------------------------------------------------
Confidence 310000
Q ss_pred cccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHH
Q 001548 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERAL 535 (1056)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~ 535 (1056)
......++..|+|||++.+..++.++|||||||++|||++ + |......
T Consensus 159 ----------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~ 210 (262)
T cd05071 159 ----------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR 210 (262)
T ss_pred ----------------------------cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH
Confidence 0002235667999999988889999999999999999998 4 3332222
Q ss_pred HHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001548 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1056)
Q Consensus 536 ~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~ 581 (1056)
. ....+.....++.....++.+.+|+.+||++||.+||++.++++
T Consensus 211 ~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 211 E-VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred H-HHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 2 22222222223334456788999999999999999999999876
No 359
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.93 E-value=8.3e-26 Score=248.49 Aligned_cols=236 Identities=15% Similarity=0.048 Sum_probs=163.3
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcc
Q 001548 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1056)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1056)
..+|.|.||++...+...+ ..+. ...+.... ..-......+....|||++.+..... . .
T Consensus 15 g~g~~~~v~~~~~~~~~~~-----~lK~-~~~~~~~~-~~~~~E~~~l~~l~h~~i~~~~~~~~--~--~---------- 73 (260)
T cd05069 15 GQGCFGEVWMGTWNGTTKV-----AIKT-LKPGTMMP-EAFLQEAQIMKKLRHDKLVPLYAVVS--E--E---------- 73 (260)
T ss_pred cCcCCCeEEEEEEcCCceE-----EEEE-cccCCccH-HHHHHHHHHHHhCCCCCeeeEEEEEc--C--C----------
Confidence 3467899999876432111 1111 11111111 11112245677788999887543311 0 0
Q ss_pred cccCCCcccccCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhh
Q 001548 299 CWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1056)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~ 377 (1056)
....+|+++.|++|.+++... +..++...+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||+++
T Consensus 74 ---~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~ 150 (260)
T cd05069 74 ---PIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLAR 150 (260)
T ss_pred ---CcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccce
Confidence 012489999999999999764 3457777899999999999999999999999999999999999999999999886
Q ss_pred cccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCC
Q 001548 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1056)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~ 457 (1056)
.......
T Consensus 151 ~~~~~~~------------------------------------------------------------------------- 157 (260)
T cd05069 151 LIEDNEY------------------------------------------------------------------------- 157 (260)
T ss_pred EccCCcc-------------------------------------------------------------------------
Confidence 6431000
Q ss_pred cccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHH
Q 001548 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSER 533 (1056)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~ 533 (1056)
.......++..|+|||.+.+..++.++|||||||++|||++ + |....
T Consensus 158 -----------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 208 (260)
T cd05069 158 -----------------------------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMV 208 (260)
T ss_pred -----------------------------cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 00001234566999999998889999999999999999997 4 33322
Q ss_pred HHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001548 534 ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1056)
Q Consensus 534 ~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~ 581 (1056)
.. .....+.....++.....+..+.+|+.+||++||.+||++.++++
T Consensus 209 ~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 209 NR-EVLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred HH-HHHHHHHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 22 222333333333444456788999999999999999999999876
No 360
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.93 E-value=1.1e-25 Score=250.15 Aligned_cols=205 Identities=17% Similarity=0.162 Sum_probs=156.2
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....|||++.+......+.. ...+++|+.|++|.+++... .++...+..++.||+.||
T Consensus 53 ~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~l~~~i~~~--~~~~~~~~~~~~~l~~~l 114 (277)
T cd06641 53 ITVLSQCDSPYVTKYYGSYLKDTK----------------LWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGL 114 (277)
T ss_pred HHHHHhcCCCCEeEEEEEEEeCCe----------------EEEEEEeCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHH
Confidence 346677789999976655332221 12489999999999999653 467878999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||+.||+|+||||+||+++.++.++++|||+++......
T Consensus 115 ~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~--------------------------------------- 155 (277)
T cd06641 115 DYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--------------------------------------- 155 (277)
T ss_pred HHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccch---------------------------------------
Confidence 99999999999999999999999999999999876543100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......++.+|+|||
T Consensus 156 ----------------------------------------------------------------~~~~~~~~~~~y~~PE 171 (277)
T cd06641 156 ----------------------------------------------------------------IKRNTFVGTPFWMAPE 171 (277)
T ss_pred ----------------------------------------------------------------hhhccccCCccccChh
Confidence 0000345778899999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCCCCcHHH--HHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHh
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGRFDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREIL 580 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~f~~~~~--~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil 580 (1056)
.+.+..++.++|+|||||++|+|+++..++.. .......+.....+......++.+.+++.+||+.+|.+||++.+++
T Consensus 172 ~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l 251 (277)
T cd06641 172 VIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELL 251 (277)
T ss_pred hhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 99888889999999999999999987433221 1111112222223333335577889999999999999999999999
Q ss_pred hhhhhhhh
Q 001548 581 QSEVTNEF 588 (1056)
Q Consensus 581 ~~~~~~~~ 588 (1056)
+||||...
T Consensus 252 ~~~~~~~~ 259 (277)
T cd06641 252 KHKFIVRF 259 (277)
T ss_pred hCHHHhhh
Confidence 99999874
No 361
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.93 E-value=1.4e-25 Score=246.02 Aligned_cols=197 Identities=15% Similarity=0.134 Sum_probs=147.3
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH-KGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~-~~~~~~~~~i~~QIl~g 341 (1056)
...++...|++++.+......+... ...+|++++|++|.++++..+. .+++..++.++.||+.|
T Consensus 50 ~~~l~~l~~~~i~~~~~~~~~~~~~---------------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~ 114 (256)
T cd05082 50 ASVMTQLRHSNLVQLLGVIVEEKGG---------------LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 114 (256)
T ss_pred HHHHHhCCCCCeeeEEEEEEcCCCc---------------eEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 4456777899988765442211111 1248999999999999976543 47777899999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|.|||++||+||||||+||+++.++.+|++|||+++......
T Consensus 115 l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-------------------------------------- 156 (256)
T cd05082 115 MEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-------------------------------------- 156 (256)
T ss_pred HHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccC--------------------------------------
Confidence 999999999999999999999999999999999886533100
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
....++..|+||
T Consensus 157 --------------------------------------------------------------------~~~~~~~~y~aP 168 (256)
T cd05082 157 --------------------------------------------------------------------DTGKLPVKWTAP 168 (256)
T ss_pred --------------------------------------------------------------------CCCccceeecCH
Confidence 011223469999
Q ss_pred ccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHH
Q 001548 502 EELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTR 577 (1056)
Q Consensus 502 E~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~ 577 (1056)
|++.+..++.++|||||||++|||++ + |... ........+.....+......++.+.+|+.+||+.+|.+|||+.
T Consensus 169 E~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ 247 (256)
T cd05082 169 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-PLKDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFL 247 (256)
T ss_pred HHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHH
Confidence 99998889999999999999999996 4 3221 12222222322222333345678889999999999999999999
Q ss_pred HHhh
Q 001548 578 EILQ 581 (1056)
Q Consensus 578 eil~ 581 (1056)
++++
T Consensus 248 ~l~~ 251 (256)
T cd05082 248 QLRE 251 (256)
T ss_pred HHHH
Confidence 9976
No 362
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.93 E-value=1.2e-25 Score=245.32 Aligned_cols=241 Identities=17% Similarity=0.111 Sum_probs=164.2
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcc
Q 001548 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1056)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1056)
..+|.|.||++...++..++ .+.............-.....+++...||||+.+.........
T Consensus 4 g~g~~g~v~~~~~~~~~~v~-----~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~------------ 66 (251)
T cd05041 4 GKGNFGDVYKGVLKGNTEVA-----VKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQP------------ 66 (251)
T ss_pred ccCCCceEEEEEEeCCCcEE-----EEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCC------------
Confidence 34678999998864322221 1111111111111122223456778889998876554321111
Q ss_pred cccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhc
Q 001548 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1056)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~ 378 (1056)
...+|+++.|++|.+++......++...++.++.|++.||.|||++||+||||||+||+++.++.+|++|||+++.
T Consensus 67 ----~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~ 142 (251)
T cd05041 67 ----IYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRE 142 (251)
T ss_pred ----eEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeecccccc
Confidence 1238899999999999977655677878999999999999999999999999999999999999999999998865
Q ss_pred ccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCc
Q 001548 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1056)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~ 458 (1056)
.......
T Consensus 143 ~~~~~~~------------------------------------------------------------------------- 149 (251)
T cd05041 143 EEGGIYT------------------------------------------------------------------------- 149 (251)
T ss_pred ccCCcce-------------------------------------------------------------------------
Confidence 4310000
Q ss_pred ccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHH
Q 001548 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERA 534 (1056)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~ 534 (1056)
. . -.....+..|+|||.+.++.++.++|||||||++|||++ + |.....
T Consensus 150 --~------------------------~--~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~ 201 (251)
T cd05041 150 --V------------------------S--DGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN 201 (251)
T ss_pred --e------------------------c--cccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH
Confidence 0 0 001122445999999998899999999999999999997 3 322222
Q ss_pred HHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001548 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 535 ~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~ 582 (1056)
. .....+.....++.....+..+.+|+.+||..+|.+|||+.|+++.
T Consensus 202 ~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~ 248 (251)
T cd05041 202 Q-QTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNE 248 (251)
T ss_pred H-HHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 1 1222222222222233557789999999999999999999999874
No 363
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.93 E-value=2.9e-25 Score=250.69 Aligned_cols=201 Identities=15% Similarity=0.136 Sum_probs=150.3
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..+++...|||++.+......+.. ...+++|+. ++|.+++......+++..+..++.||+.||
T Consensus 66 i~~l~~l~h~niv~~~~~~~~~~~----------------~~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L 128 (307)
T cd06607 66 VRFLQQLRHPNTIEYKGCYLREHT----------------AWLVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGL 128 (307)
T ss_pred HHHHHhCCCCCEEEEEEEEEeCCe----------------EEEEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHH
Confidence 456788899999976655332111 113778887 578787766555688889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+|+||+|+||+++.++.+|++|||++......
T Consensus 129 ~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~---------------------------------------- 168 (307)
T cd06607 129 AYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA---------------------------------------- 168 (307)
T ss_pred HHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC----------------------------------------
Confidence 9999999999999999999999999999999987543200
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
....+++.|+|||
T Consensus 169 -------------------------------------------------------------------~~~~~~~~y~aPE 181 (307)
T cd06607 169 -------------------------------------------------------------------NSFVGTPYWMAPE 181 (307)
T ss_pred -------------------------------------------------------------------CCccCCccccCce
Confidence 0234667799999
Q ss_pred ccc---CCCCCccchhHHHHHHHHHHhCCCCc---HHHHHHHHHhhccCCCCCC-CCCCChhHHHHHHhccccCCCCCCC
Q 001548 503 ELS---GGVCTTSSNIYSLGVLFFELFGRFDS---ERALAAAMSDLRDRILPPS-FLSENPKEAGFCLWQLHPEPLSRPT 575 (1056)
Q Consensus 503 ~l~---~~~~t~~sDIwSLGvlL~eLlt~f~~---~~~~~~~~~~~~~~~lp~~-~~~~~~~~~~li~~lL~~dP~~Rpt 575 (1056)
++. ...++.++|||||||++|||++|..+ ......... +.....+.. ....+..+.+|+.+||..+|.+||+
T Consensus 182 ~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~ 260 (307)
T cd06607 182 VILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH-IAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPS 260 (307)
T ss_pred eeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHH-HhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcC
Confidence 985 35688999999999999999997433 222222222 222212211 1234677899999999999999999
Q ss_pred HHHHhhhhhhhhh
Q 001548 576 TREILQSEVTNEF 588 (1056)
Q Consensus 576 ~~eil~~~~~~~~ 588 (1056)
+.+|+.||||...
T Consensus 261 ~~~il~~~~~~~~ 273 (307)
T cd06607 261 SEELLKHRFVLRE 273 (307)
T ss_pred HHHHhcChhhccc
Confidence 9999999999864
No 364
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.93 E-value=1.8e-25 Score=250.95 Aligned_cols=203 Identities=13% Similarity=0.139 Sum_probs=147.3
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCC----------CCCHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH----------KGKRIECL 332 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~----------~~~~~~~~ 332 (1056)
...++...|||++.+......+... ..+|+++.|++|.+++..... .++...+.
T Consensus 70 ~~~l~~l~~~~i~~~~~~~~~~~~~----------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 133 (296)
T cd05095 70 IKIMSRLKDPNIIRLLAVCITSDPL----------------CMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLI 133 (296)
T ss_pred HHHHHhCCCCCcceEEEEEecCCcc----------------EEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHH
Confidence 4567788999999876654332221 248999999999999966432 35556899
Q ss_pred HHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccc
Q 001548 333 YIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASA 412 (1056)
Q Consensus 333 ~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (1056)
.++.||+.||+|||++||+||||||+|||++.++.++++|||+++.+......
T Consensus 134 ~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~--------------------------- 186 (296)
T cd05095 134 FMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYY--------------------------- 186 (296)
T ss_pred HHHHHHHHHHHHHHHCCeecccCChheEEEcCCCCEEeccCcccccccCCcce---------------------------
Confidence 99999999999999999999999999999999999999999998764310000
Q ss_pred ccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCcccccccccccccccc
Q 001548 413 KKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQ 492 (1056)
Q Consensus 413 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (1056)
......
T Consensus 187 --------------------------------------------------------------------------~~~~~~ 192 (296)
T cd05095 187 --------------------------------------------------------------------------RIQGRA 192 (296)
T ss_pred --------------------------------------------------------------------------eccCcC
Confidence 000022
Q ss_pred ccCCCccCcccccCCCCCccchhHHHHHHHHHHhC--C---CCcHHHHHHH------HHhhccCCCCCCCCCCChhHHHH
Q 001548 493 LEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG--R---FDSERALAAA------MSDLRDRILPPSFLSENPKEAGF 561 (1056)
Q Consensus 493 ~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt--~---f~~~~~~~~~------~~~~~~~~lp~~~~~~~~~~~~l 561 (1056)
.++..|+|||++.++.++.++|||||||++|||++ + |......... ..........+....+++.+.+|
T Consensus 193 ~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 272 (296)
T cd05095 193 VLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKL 272 (296)
T ss_pred cCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHH
Confidence 34567999999988889999999999999999996 2 3221111111 11111112223334566889999
Q ss_pred HHhccccCCCCCCCHHHHhhh
Q 001548 562 CLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 562 i~~lL~~dP~~Rpt~~eil~~ 582 (1056)
+.+||++||.+||++.+|++.
T Consensus 273 i~~cl~~~p~~Rp~~~~i~~~ 293 (296)
T cd05095 273 MLSCWRRNAKERPSFQEIHAT 293 (296)
T ss_pred HHHHcCCCcccCCCHHHHHHH
Confidence 999999999999999999763
No 365
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=1.3e-24 Score=237.13 Aligned_cols=271 Identities=23% Similarity=0.306 Sum_probs=209.1
Q ss_pred EEEEEccCceEEeEEEeeeecCCCCCEEEEEEcC-------CCCEEEEEeCCCcEEEEEcCCCCCCCcccccce------
Q 001548 756 CKYARYSKFEVQGMLRTGEFNNSANVICSISFDR-------DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPA------ 822 (1056)
Q Consensus 756 ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fsp-------dg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~------ 822 (1056)
+.+|=|...+ ...+.++++.-.+-++ |++|.- -|+++|.|+.|..|.|||+.-. +...|.
T Consensus 152 LEvYVyn~~e-~nlYvHHD~ilpafPL-C~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~-----d~v~P~~~LGs~ 224 (463)
T KOG0270|consen 152 LEVYVYNEEE-ENLYVHHDFILPAFPL-CIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIV-----DAVLPCVTLGSK 224 (463)
T ss_pred EEEEEEcCCC-cceeEecceeccCcch-hhhhhhcCCCCCCCcceEEEeccCceeEEeccccc-----cccccceeechh
Confidence 4555555432 4455666666555554 455642 3789999999999999998631 111222
Q ss_pred -------------EeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEE
Q 001548 823 -------------VEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLAS 889 (1056)
Q Consensus 823 -------------~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laS 889 (1056)
...+|+..|.+++|+....+.|||||.|.+|++||+.++++..+++.|.+.|.++.|+|..+.+|++
T Consensus 225 ~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLs 304 (463)
T KOG0270|consen 225 ASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLS 304 (463)
T ss_pred hhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEe
Confidence 2235888899999998888999999999999999999999999999999999999999999999999
Q ss_pred EeCCCcEEEEECCCCc-eeEEEeCCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc--
Q 001548 890 GSDDCSVKLWNINEKN-SLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-- 966 (1056)
Q Consensus 890 gs~Dg~V~IWDlr~~~-~~~~~~~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs-- 966 (1056)
||.|++|.+.|+|... .-..++..+.|-.++|+|...+.++++..||+|+-+|+|+...++.++.+|..+|++|+++
T Consensus 305 Gs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~ 384 (463)
T KOG0270|consen 305 GSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQ 384 (463)
T ss_pred ccccceEEeeeccCccccCceEEeccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCC
Confidence 9999999999999543 3455667789999999999999999999999999999999988899999999999999998
Q ss_pred CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCC-CEEEEEEcCCcEEEEe
Q 001548 967 DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSD-CWLLLVCFDFTTLSFR 1045 (1056)
Q Consensus 967 ~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g-~~l~s~s~D~~v~iW~ 1045 (1056)
..++++|+|.|++|++|++...++. ...+|.-.+-.++ +....|+- .+++.+|..+.++||+
T Consensus 385 ~p~~l~t~s~d~~Vklw~~~~~~~~---------~v~~~~~~~~rl~--------c~~~~~~~a~~la~GG~k~~~~vwd 447 (463)
T KOG0270|consen 385 TPGLLSTASTDKVVKLWKFDVDSPK---------SVKEHSFKLGRLH--------CFALDPDVAFTLAFGGEKAVLRVWD 447 (463)
T ss_pred CCcceeeccccceEEEEeecCCCCc---------cccccccccccee--------ecccCCCcceEEEecCccceEEEee
Confidence 5678999999999999999854331 1122222110111 01123333 3456677777899999
Q ss_pred CCCCe
Q 001548 1046 TSWGC 1050 (1056)
Q Consensus 1046 v~~~~ 1050 (1056)
+....
T Consensus 448 ~~~~~ 452 (463)
T KOG0270|consen 448 IFTNS 452 (463)
T ss_pred cccCh
Confidence 87653
No 366
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.93 E-value=1.6e-25 Score=249.42 Aligned_cols=203 Identities=18% Similarity=0.128 Sum_probs=146.7
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....|||++.+.......... +-...|+|+.|++|.+++... .+++..++.++.||+.||
T Consensus 57 ~~~l~~l~h~~i~~~~~~~~~~~~~--------------~~~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l 120 (283)
T cd05080 57 INILKTLYHENIVKYKGCCSEQGGK--------------GLQLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGM 120 (283)
T ss_pred HHHHHhCCCCCEeeEEEEEecCCCc--------------eEEEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHH
Confidence 4567788999999765542211100 012489999999999999764 478889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
+|||++||+||||||+||+++.++.+|++|||+++........
T Consensus 121 ~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~------------------------------------- 163 (283)
T cd05080 121 AYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY------------------------------------- 163 (283)
T ss_pred HHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchh-------------------------------------
Confidence 9999999999999999999999999999999998764310000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
........++..|+|||
T Consensus 164 ---------------------------------------------------------------~~~~~~~~~~~~~~~PE 180 (283)
T cd05080 164 ---------------------------------------------------------------YRVREDGDSPVFWYAVE 180 (283)
T ss_pred ---------------------------------------------------------------hccCCCCCCCceeeCHh
Confidence 00000123455699999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCCCCcHHH----HHHH-------------HHhhccCCCCCCCCCCChhHHHHHHhc
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGRFDSERA----LAAA-------------MSDLRDRILPPSFLSENPKEAGFCLWQ 565 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~f~~~~~----~~~~-------------~~~~~~~~lp~~~~~~~~~~~~li~~l 565 (1056)
.+.+..++.++|||||||++|||+++..+... .... ...+.....++.....++.+.+|+..|
T Consensus 181 ~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 260 (283)
T cd05080 181 CLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNC 260 (283)
T ss_pred HhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHH
Confidence 99988899999999999999999987322210 0000 001111111222334567899999999
Q ss_pred cccCCCCCCCHHHHhh
Q 001548 566 LHPEPLSRPTTREILQ 581 (1056)
Q Consensus 566 L~~dP~~Rpt~~eil~ 581 (1056)
|+++|++|||+.++++
T Consensus 261 l~~~p~~Rps~~~i~~ 276 (283)
T cd05080 261 WETEAKFRPTFRSLIP 276 (283)
T ss_pred hccChhhCCCHHHHHH
Confidence 9999999999999986
No 367
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.93 E-value=7.9e-26 Score=247.62 Aligned_cols=203 Identities=17% Similarity=0.176 Sum_probs=155.7
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~QIl~g 341 (1056)
...++...|||++.+......+.. ...+++++.|++|.+++... ...+++..++.++.||+.|
T Consensus 50 ~~~l~~l~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 113 (256)
T cd08218 50 VAVLSNMKHPNIVQYQESFEENGN----------------LYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLA 113 (256)
T ss_pred HHHHHhCCCCCeeeeEeeecCCCe----------------EEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence 446777789998876554221111 12488999999999999664 3456777899999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|.|||++||+|+||+|+||+++.++.++++|||++.......
T Consensus 114 l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~-------------------------------------- 155 (256)
T cd08218 114 LKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV-------------------------------------- 155 (256)
T ss_pred HHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch--------------------------------------
Confidence 999999999999999999999999999999999886543100
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
.......|++.|+||
T Consensus 156 -----------------------------------------------------------------~~~~~~~~~~~~~~p 170 (256)
T cd08218 156 -----------------------------------------------------------------ELARTCIGTPYYLSP 170 (256)
T ss_pred -----------------------------------------------------------------hhhhhccCCccccCH
Confidence 000023577889999
Q ss_pred ccccCCCCCccchhHHHHHHHHHHhCCC---CcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001548 502 EELSGGVCTTSSNIYSLGVLFFELFGRF---DSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1056)
Q Consensus 502 E~l~~~~~t~~sDIwSLGvlL~eLlt~f---~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~e 578 (1056)
|++.+..++.++|+|||||++|+|+++. ............ .....++.....++.+.++|.+||+++|.+||++.+
T Consensus 171 e~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 249 (256)
T cd08218 171 EICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKI-IRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNS 249 (256)
T ss_pred HHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHH-hcCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHH
Confidence 9999888999999999999999999873 322222222222 233344444566888999999999999999999999
Q ss_pred Hhhhhhh
Q 001548 579 ILQSEVT 585 (1056)
Q Consensus 579 il~~~~~ 585 (1056)
+++||||
T Consensus 250 vl~~~~~ 256 (256)
T cd08218 250 ILEKNFI 256 (256)
T ss_pred HhhCcCC
Confidence 9999997
No 368
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.93 E-value=1e-25 Score=247.90 Aligned_cols=200 Identities=16% Similarity=0.181 Sum_probs=152.8
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIV 339 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~QIl 339 (1056)
...++...|++++.+......+.. ...+|+|++|++|.+++.. .+..++...++.++.||+
T Consensus 53 i~~l~~~~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~ 116 (267)
T cd08224 53 IDLLKQLDHPNVIKYLASFIENNE----------------LNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLC 116 (267)
T ss_pred HHHHHhCCCCCeeeeeeeeecCCe----------------EEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHH
Confidence 456777789998876555332111 1248999999999999864 234577889999999999
Q ss_pred HHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccc
Q 001548 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (1056)
Q Consensus 340 ~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 419 (1056)
.||.|||+.||+|+||||+||+++.++.++++|||+++......
T Consensus 117 ~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~------------------------------------ 160 (267)
T cd08224 117 SALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT------------------------------------ 160 (267)
T ss_pred HHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCC------------------------------------
Confidence 99999999999999999999999999999999999876543100
Q ss_pred cccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCcc
Q 001548 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (1056)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 499 (1056)
.......++..|+
T Consensus 161 -------------------------------------------------------------------~~~~~~~~~~~y~ 173 (267)
T cd08224 161 -------------------------------------------------------------------TAAHSLVGTPYYM 173 (267)
T ss_pred -------------------------------------------------------------------cccceecCCcccc
Confidence 0001345778899
Q ss_pred CcccccCCCCCccchhHHHHHHHHHHhCCCCcH----HHHHHHHHhhccCCCCCCCC-CCChhHHHHHHhccccCCCCCC
Q 001548 500 SPEELSGGVCTTSSNIYSLGVLFFELFGRFDSE----RALAAAMSDLRDRILPPSFL-SENPKEAGFCLWQLHPEPLSRP 574 (1056)
Q Consensus 500 APE~l~~~~~t~~sDIwSLGvlL~eLlt~f~~~----~~~~~~~~~~~~~~lp~~~~-~~~~~~~~li~~lL~~dP~~Rp 574 (1056)
|||.+.+..++.++|||||||++|+|+++..+. .........+.....++... ..+..+.+++.+||+++|++||
T Consensus 174 apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp 253 (267)
T cd08224 174 SPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRP 253 (267)
T ss_pred CHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCC
Confidence 999999988999999999999999999863322 12223344444444444444 5667889999999999999999
Q ss_pred CHHHHhh
Q 001548 575 TTREILQ 581 (1056)
Q Consensus 575 t~~eil~ 581 (1056)
++.+|++
T Consensus 254 ~~~~il~ 260 (267)
T cd08224 254 DISYVLQ 260 (267)
T ss_pred CHHHHHH
Confidence 9999876
No 369
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.93 E-value=1.5e-25 Score=250.13 Aligned_cols=203 Identities=16% Similarity=0.170 Sum_probs=144.4
Q ss_pred hhccC-CCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHH---HHh-cCCCCCHHHHHHHHHHHH
Q 001548 265 MVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREW---LNA-RGHKGKRIECLYIFRQIV 339 (1056)
Q Consensus 265 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~---l~~-~~~~~~~~~~~~i~~QIl 339 (1056)
.+... .||||+.+......... ....|+++. ++|.++ +.. ....+++..+..++.|++
T Consensus 55 ~l~~~~~~~~iv~~~~~~~~~~~----------------~~~~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~ 117 (288)
T cd06616 55 VVMRSSDCPYIVKFYGALFREGD----------------CWICMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATV 117 (288)
T ss_pred HHHHhcCCCCEeeeeeEEecCCc----------------EEEEEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHH
Confidence 34444 59999876554221110 112566655 355443 322 234678889999999999
Q ss_pred HHHHHhhhc-CcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccc
Q 001548 340 ALVDYHHTQ-GVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (1056)
Q Consensus 340 ~gL~ylHs~-gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 418 (1056)
.||+|||+. ||+||||||+||+++.++.+|++|||+++....+.
T Consensus 118 ~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~----------------------------------- 162 (288)
T cd06616 118 KALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI----------------------------------- 162 (288)
T ss_pred HHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC-----------------------------------
Confidence 999999975 99999999999999999999999999987643100
Q ss_pred ccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCc
Q 001548 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (1056)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 498 (1056)
......|+..|
T Consensus 163 ---------------------------------------------------------------------~~~~~~~~~~y 173 (288)
T cd06616 163 ---------------------------------------------------------------------AKTRDAGCRPY 173 (288)
T ss_pred ---------------------------------------------------------------------ccccccCccCc
Confidence 00033577889
Q ss_pred cCcccccCC---CCCccchhHHHHHHHHHHhCCCCcH---HHHHHHHHhhccCCCCC----CCCCCChhHHHHHHhcccc
Q 001548 499 ASPEELSGG---VCTTSSNIYSLGVLFFELFGRFDSE---RALAAAMSDLRDRILPP----SFLSENPKEAGFCLWQLHP 568 (1056)
Q Consensus 499 ~APE~l~~~---~~t~~sDIwSLGvlL~eLlt~f~~~---~~~~~~~~~~~~~~lp~----~~~~~~~~~~~li~~lL~~ 568 (1056)
+|||++.+. .++.++|||||||++|||++|..++ ......+........|. .....++.+.+|+.+||++
T Consensus 174 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 253 (288)
T cd06616 174 MAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIK 253 (288)
T ss_pred cCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccC
Confidence 999999876 6899999999999999999873332 22222222222221111 1224678899999999999
Q ss_pred CCCCCCCHHHHhhhhhhhhh
Q 001548 569 EPLSRPTTREILQSEVTNEF 588 (1056)
Q Consensus 569 dP~~Rpt~~eil~~~~~~~~ 588 (1056)
||++|||+.+|+.||||...
T Consensus 254 ~p~~Rpt~~~i~~~~~~~~~ 273 (288)
T cd06616 254 DESKRPKYKELLEHPFIKDY 273 (288)
T ss_pred ChhhCcCHHHHhcChhhhch
Confidence 99999999999999999764
No 370
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.93 E-value=1.4e-25 Score=257.69 Aligned_cols=212 Identities=19% Similarity=0.258 Sum_probs=154.9
Q ss_pred hhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Q 001548 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~g 341 (1056)
...++....||||+.+.+....+.... ..... ..+|+++ |++|.+++... .+++..++.++.||+.|
T Consensus 64 E~~~l~~l~h~~iv~~~~~~~~~~~~~-----~~~~~-----~lv~e~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~a 130 (343)
T cd07880 64 ELRLLKHMKHENVIGLLDVFTPDLSLD-----RFHDF-----YLVMPFM-GTDLGKLMKHE--KLSEDRIQFLVYQMLKG 130 (343)
T ss_pred HHHHHHhcCCCCccceeeeecCCcccc-----ccceE-----EEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHH
Confidence 345778889999998766644332221 00011 2367776 88999988653 57788999999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|.|||++||+||||||+||+++.++.+|++|||+++.....
T Consensus 131 l~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~--------------------------------------- 171 (343)
T cd07880 131 LKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE--------------------------------------- 171 (343)
T ss_pred HHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccC---------------------------------------
Confidence 99999999999999999999999999999999987653210
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
.....++++|+||
T Consensus 172 -------------------------------------------------------------------~~~~~~~~~y~aP 184 (343)
T cd07880 172 -------------------------------------------------------------------MTGYVVTRWYRAP 184 (343)
T ss_pred -------------------------------------------------------------------ccccccCCcccCH
Confidence 0033567889999
Q ss_pred ccccC-CCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCC---------------------CC--------
Q 001548 502 EELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRI---------------------LP-------- 548 (1056)
Q Consensus 502 E~l~~-~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~---------------------lp-------- 548 (1056)
|.+.+ ..++.++|+|||||++|+|++| |............+.... +|
T Consensus 185 E~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (343)
T cd07880 185 EVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFR 264 (343)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHH
Confidence 99876 4588999999999999999986 332222211111111000 00
Q ss_pred CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhhhc
Q 001548 549 PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (1056)
Q Consensus 549 ~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~~~ 592 (1056)
......++.+.+++.+||+.||.+|||+.+++.||||.......
T Consensus 265 ~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~~ 308 (343)
T cd07880 265 SLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDPE 308 (343)
T ss_pred HhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCcc
Confidence 11235577889999999999999999999999999999875543
No 371
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.93 E-value=8.1e-25 Score=241.37 Aligned_cols=298 Identities=15% Similarity=0.188 Sum_probs=223.8
Q ss_pred cccccccccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcE
Q 001548 724 DLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKI 803 (1056)
Q Consensus 724 ~~l~gh~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg~I 803 (1056)
-.+++|+..|.++++ +.++...++|++|-++++||+.........-+.-.+...+.|.++.|++.|+.|++.+....+
T Consensus 161 i~l~hgtk~Vsal~~--Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqa 238 (641)
T KOG0772|consen 161 IQLKHGTKIVSALAV--DPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQA 238 (641)
T ss_pred EeccCCceEEEEeee--cCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcce
Confidence 357788889999887 446667789999999999998754432111111123567789999999999999999989999
Q ss_pred EEEEcCCCCC---CCccc--ccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCc-eEEEEe-----cCCC
Q 001548 804 KIFEFNALFN---DSVDV--YYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQ-TVSHYI-----EHEK 872 (1056)
Q Consensus 804 ~Iwdl~t~~~---~~~~~--~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~-~v~~~~-----~H~~ 872 (1056)
+|+|-+.... ...++ .-...+.+|...++|.+|+|.+.+.|+||++||++||||+...+ ....|+ +-.-
T Consensus 239 kl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv 318 (641)
T KOG0772|consen 239 KLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRV 318 (641)
T ss_pred eEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCccc
Confidence 9999764210 01111 11235568999999999999999999999999999999997543 334443 1234
Q ss_pred cEEEEEEecCCCCEEEEEeCCCcEEEEECCCCce--eEEEe--CC--CCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCC
Q 001548 873 RAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNS--LATIK--NI--ANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNA 946 (1056)
Q Consensus 873 ~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~--~~~~~--~~--~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~ 946 (1056)
.+++++|++ ++.+||+|..||+|.+||.+.... ...++ |. ..|+||.|+++|+ +|++=+.|+++++||+|+.
T Consensus 319 ~~tsC~~nr-dg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~-~LlSRg~D~tLKvWDLrq~ 396 (641)
T KOG0772|consen 319 PVTSCAWNR-DGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGN-YLLSRGFDDTLKVWDLRQF 396 (641)
T ss_pred CceeeecCC-CcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccc-hhhhccCCCceeeeecccc
Confidence 579999999 999999999999999999875432 22222 44 4899999999997 8999999999999999999
Q ss_pred CcceEEecCCC--CCeEEEEEcC-CCEEEEEE------CCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCC
Q 001548 947 RAPWCVLAGHE--KAVSYVKFLD-SGTLVTAS------TDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEH 1017 (1056)
Q Consensus 947 ~~~~~~l~gH~--~~V~~l~fs~-~~~L~SgS------~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~ 1017 (1056)
+.++.+..+-. .+-+.++|+| ..+|+||+ .-+++.++|..+ -..++++.-.+..|+.+.
T Consensus 397 kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t--------~d~v~ki~i~~aSvv~~~---- 464 (641)
T KOG0772|consen 397 KKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMT--------LDTVYKIDISTASVVRCL---- 464 (641)
T ss_pred ccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccc--------eeeEEEecCCCceEEEEe----
Confidence 99887776543 3568889994 55677775 357899998762 234444444455555555
Q ss_pred cceeeEEeeCCCCEEEEEEcCCcEEEE
Q 001548 1018 NLFPFTIFNLSDCWLLLVCFDFTTLSF 1044 (1056)
Q Consensus 1018 ~~~~~~~~s~~g~~l~s~s~D~~v~iW 1044 (1056)
|+|.=..+..++.||++.++
T Consensus 465 -------WhpkLNQi~~gsgdG~~~vy 484 (641)
T KOG0772|consen 465 -------WHPKLNQIFAGSGDGTAHVY 484 (641)
T ss_pred -------ecchhhheeeecCCCceEEE
Confidence 99999999999999999864
No 372
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.93 E-value=5e-27 Score=244.86 Aligned_cols=249 Identities=15% Similarity=0.095 Sum_probs=186.5
Q ss_pred HHHhhhcc--ccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCc
Q 001548 214 FFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1056)
Q Consensus 214 ~~~k~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1056)
|.|-..|+ ..|.|||..- ++..+..|.+..-.++|-..-++...+|..-+.|.+|
T Consensus 35 FDi~~KLGEGSYGSV~KAIH-------~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVV---------------- 91 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIH-------RESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVV---------------- 91 (502)
T ss_pred HHHHHHhcCCcchHHHHHHH-------hccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhh----------------
Confidence 44444443 5699999876 4455554444444555544444445556666555544
Q ss_pred CCCCCcccc--cCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEE
Q 001548 292 RTGVPASCW--IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1056)
Q Consensus 292 ~~~~~~~~~--~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vk 369 (1056)
.-++++| .--+++||||..|++.+.++.+...+.+.++..+++..|.||+|||...-||||||..|||+.-+|..|
T Consensus 92 --KYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AK 169 (502)
T KOG0574|consen 92 --KYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAK 169 (502)
T ss_pred --hhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhh
Confidence 3345556 336789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCccccccccccccc
Q 001548 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1056)
Q Consensus 370 l~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~ 449 (1056)
++|||.+-.+.+. .+|
T Consensus 170 LADFGVAGQLTDT----------------------------MAK------------------------------------ 185 (502)
T KOG0574|consen 170 LADFGVAGQLTDT----------------------------MAK------------------------------------ 185 (502)
T ss_pred hhhccccchhhhh----------------------------HHh------------------------------------
Confidence 9999998665410 000
Q ss_pred CCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCCC
Q 001548 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRF 529 (1056)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~f 529 (1056)
-.+.+|||.|||||++..-.|.+++||||||++..||..|-
T Consensus 186 ---------------------------------------RNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~ 226 (502)
T KOG0574|consen 186 ---------------------------------------RNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGR 226 (502)
T ss_pred ---------------------------------------hCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCC
Confidence 01689999999999999999999999999999999999874
Q ss_pred CcHHHHHHHHHhhccC-CCCCCCC---CCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhh
Q 001548 530 DSERALAAAMSDLRDR-ILPPSFL---SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1056)
Q Consensus 530 ~~~~~~~~~~~~~~~~-~lp~~~~---~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~ 590 (1056)
++....--+-.+..-+ ..||.|. ..+.++.+|++.||.+.|++|-|+-++++|+|+...+.
T Consensus 227 PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g 291 (502)
T KOG0574|consen 227 PPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPG 291 (502)
T ss_pred CCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCc
Confidence 4432222221222211 2233332 45677889999999999999999999999999987543
No 373
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.93 E-value=1.6e-25 Score=247.43 Aligned_cols=205 Identities=14% Similarity=0.118 Sum_probs=148.8
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...++...|||++.+......+.. ...+|||++|++|.++++..+..++...++.++.|++.||
T Consensus 56 ~~~l~~l~h~ni~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al 119 (269)
T cd05065 56 ASIMGQFDHPNIIHLEGVVTKSRP----------------VMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGM 119 (269)
T ss_pred HHHHHhCCCcCcceEEEEECCCCc----------------eEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHH
Confidence 456777899999976554321111 1138999999999999987666778889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+|+||||+||+++.++.+|++|||+++.........
T Consensus 120 ~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~------------------------------------ 163 (269)
T cd05065 120 KYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP------------------------------------ 163 (269)
T ss_pred HHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCcccc------------------------------------
Confidence 99999999999999999999999999999999886543100000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
. .........+..|+|||
T Consensus 164 --------------------------------------~------------------------~~~~~~~~~~~~y~~PE 181 (269)
T cd05065 164 --------------------------------------T------------------------YTSSLGGKIPIRWTAPE 181 (269)
T ss_pred --------------------------------------c------------------------cccccCCCcceeecCHh
Confidence 0 00000111245699999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~e 578 (1056)
.+.+..++.++|||||||++|||++ + |....... ....+......+.....++.+.+++.+||.++|.+||++.+
T Consensus 182 ~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 260 (269)
T cd05065 182 AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-VINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQ 260 (269)
T ss_pred HhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH-HHHHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 9998899999999999999999885 4 32222211 12222222222333456778899999999999999999999
Q ss_pred Hhhh
Q 001548 579 ILQS 582 (1056)
Q Consensus 579 il~~ 582 (1056)
|+..
T Consensus 261 i~~~ 264 (269)
T cd05065 261 IVST 264 (269)
T ss_pred HHHH
Confidence 9863
No 374
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.93 E-value=7.6e-26 Score=253.46 Aligned_cols=208 Identities=19% Similarity=0.272 Sum_probs=150.5
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH-KGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~-~~~~~~~~~i~~QIl~g 341 (1056)
...+....|||++.+......+... ..+|+|++ ++|.+++..... ..++..++.++.||+.|
T Consensus 52 ~~~l~~l~h~~i~~~~~~~~~~~~~----------------~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~a 114 (294)
T PLN00009 52 ISLLKEMQHGNIVRLQDVVHSEKRL----------------YLVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRG 114 (294)
T ss_pred HHHHHhccCCCEeeEEEEEecCCeE----------------EEEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHH
Confidence 4567788999999876654322111 13788885 588888755433 35777888999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEcc-CCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQ-SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~-~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 420 (1056)
|+|||++||+||||||+||+++. ++.+|++|||+++.....
T Consensus 115 L~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~-------------------------------------- 156 (294)
T PLN00009 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP-------------------------------------- 156 (294)
T ss_pred HHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCC--------------------------------------
Confidence 99999999999999999999985 457999999988654310
Q ss_pred ccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccC
Q 001548 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (1056)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 500 (1056)
....+...+++.|+|
T Consensus 157 -----------------------------------------------------------------~~~~~~~~~~~~y~~ 171 (294)
T PLN00009 157 -----------------------------------------------------------------VRTFTHEVVTLWYRA 171 (294)
T ss_pred -----------------------------------------------------------------ccccccCceeecccC
Confidence 000113457888999
Q ss_pred cccccC-CCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhc---cC-------------------CCCC-----
Q 001548 501 PEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLR---DR-------------------ILPP----- 549 (1056)
Q Consensus 501 PE~l~~-~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~---~~-------------------~lp~----- 549 (1056)
||.+.+ ..++.++|||||||++|+|+++ |............+. .. ..++
T Consensus 172 PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (294)
T PLN00009 172 PEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLAT 251 (294)
T ss_pred HHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHH
Confidence 999877 4579999999999999999987 332222222221111 00 0000
Q ss_pred CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhh
Q 001548 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1056)
Q Consensus 550 ~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~ 590 (1056)
.....++++.+|+.+||+.+|.+||++.++++||||.....
T Consensus 252 ~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~~ 292 (294)
T PLN00009 252 VVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLGD 292 (294)
T ss_pred hCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHhc
Confidence 11345778899999999999999999999999999987653
No 375
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.93 E-value=1.8e-25 Score=248.51 Aligned_cols=244 Identities=14% Similarity=0.116 Sum_probs=164.9
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCCch-hHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcc
Q 001548 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD-AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1056)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1056)
.+|+|+||+|...+.-+........+.. ....... ..........+....|||++.+......+.. .
T Consensus 16 ~g~~g~V~~~~~~~~~~~~~~~v~~k~~-~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~--------~--- 83 (280)
T cd05043 16 EGTFGRIFYGILIDEKPGKEEEVFVKTV-KDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE--------P--- 83 (280)
T ss_pred ccCCceEEEEEEecCCCCceeEEEEEEc-cCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC--------C---
Confidence 3588999999864311000011111111 1111111 1112223445677799999987665332211 1
Q ss_pred cccCCCcccccCCCCCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEe
Q 001548 299 CWIGGLRQGSSDHGVNLREWLNARG-------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1056)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~-------~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~ 371 (1056)
....++++.+++|.++|.... ..++...++.++.||+.||.|||++||+||||||+||+++.++.+|++
T Consensus 84 ----~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~ 159 (280)
T cd05043 84 ----PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKIT 159 (280)
T ss_pred ----CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEEC
Confidence 123677889999999996632 347788999999999999999999999999999999999999999999
Q ss_pred CcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCC
Q 001548 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1056)
Q Consensus 372 Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~ 451 (1056)
|||+++.+......
T Consensus 160 d~g~~~~~~~~~~~------------------------------------------------------------------ 173 (280)
T cd05043 160 DNALSRDLFPMDYH------------------------------------------------------------------ 173 (280)
T ss_pred CCCCcccccCCceE------------------------------------------------------------------
Confidence 99998765411000
Q ss_pred CCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C--
Q 001548 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R-- 528 (1056)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~-- 528 (1056)
.......++..|+|||++.+..++.++|||||||++||+++ +
T Consensus 174 -----------------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~ 218 (280)
T cd05043 174 -----------------------------------CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQT 218 (280)
T ss_pred -----------------------------------EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCC
Confidence 00001234566999999998889999999999999999997 4
Q ss_pred -CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001548 529 -FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1056)
Q Consensus 529 -f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~ 581 (1056)
|..... ......+.....++.....++.+.+++.+||++||++|||+.++++
T Consensus 219 p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 219 PYVEIDP-FEMAAYLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred CcCcCCH-HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 333222 2222333333233333455778999999999999999999999986
No 376
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.93 E-value=2.2e-25 Score=247.81 Aligned_cols=200 Identities=16% Similarity=0.054 Sum_probs=150.6
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....|||++.+....... . ...+|+|+.|++|.+++......+++..+..++.||+.||
T Consensus 60 ~~~l~~l~h~~i~~~~~~~~~~------------~-----~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l 122 (279)
T cd05057 60 AYVMASVDHPHVVRLLGICLSS------------Q-----VQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGM 122 (279)
T ss_pred HHHHHhCCCCCcceEEEEEecC------------c-----eEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence 4566777899999866553320 0 1238999999999999987666688889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
+|||++||+||||||+||+++.++.+|++|||+++........
T Consensus 123 ~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~------------------------------------- 165 (279)
T cd05057 123 SYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKE------------------------------------- 165 (279)
T ss_pred HHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcccc-------------------------------------
Confidence 9999999999999999999999999999999998764410000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......++..|+|||
T Consensus 166 ----------------------------------------------------------------~~~~~~~~~~~y~~PE 181 (279)
T cd05057 166 ----------------------------------------------------------------YHAEGGKVPIKWMALE 181 (279)
T ss_pred ----------------------------------------------------------------eecCCCcccccccCHH
Confidence 0000112345699999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~e 578 (1056)
.+....++.++|||||||++|||++ + |...... .....+......+.....+..+.+++..||..+|..||++.+
T Consensus 182 ~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~ 260 (279)
T cd05057 182 SILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV-EIPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKE 260 (279)
T ss_pred HhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH-HHHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHH
Confidence 9988889999999999999999997 5 3332211 222233333333344456788999999999999999999999
Q ss_pred Hhh
Q 001548 579 ILQ 581 (1056)
Q Consensus 579 il~ 581 (1056)
+++
T Consensus 261 l~~ 263 (279)
T cd05057 261 LIN 263 (279)
T ss_pred HHH
Confidence 875
No 377
>PTZ00420 coronin; Provisional
Probab=99.93 E-value=1.6e-23 Score=249.40 Aligned_cols=230 Identities=10% Similarity=0.109 Sum_probs=173.8
Q ss_pred EECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCCCCCcc-cccceEeecC
Q 001548 750 AFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRD-EDHFAAAGVSKKIKIFEFNALFNDSVD-VYYPAVEMSN 827 (1056)
Q Consensus 750 ~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspd-g~~latg~~Dg~I~Iwdl~t~~~~~~~-~~~~~~~~~h 827 (1056)
|..++.+++|+..+..... .+.+|...|.+++|+|+ +++||||+.|++|+||++.+....... ........+|
T Consensus 50 GG~~gvI~L~~~~r~~~v~-----~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH 124 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVI-----KLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGH 124 (568)
T ss_pred CCceeEEEeeecCCCceEE-----EEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecC
Confidence 4467788999876543322 35699999999999997 789999999999999999742110000 1112345679
Q ss_pred CCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcee
Q 001548 828 RSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSL 907 (1056)
Q Consensus 828 ~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~ 907 (1056)
...|.+++|+|+...+|++|+.|++|+|||+.+++.+..+. |...|.+++|+| ++.+|++++.|++|+|||++++..+
T Consensus 125 ~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~Slswsp-dG~lLat~s~D~~IrIwD~Rsg~~i 202 (568)
T PTZ00420 125 KKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNI-KGNLLSGTCVGKHMHIIDPRKQEIA 202 (568)
T ss_pred CCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECC-CCCEEEEEecCCEEEEEECCCCcEE
Confidence 99999999999845567899999999999999998887776 678899999999 9999999999999999999999998
Q ss_pred EEEe-CCCCe-----EEEEEccCCCcEEEEEeCC----CeEEEEEcCCCCcceEEecCCC--CCeEEEEEc-CCCEEEEE
Q 001548 908 ATIK-NIANV-----CCVQFSAHSSHLLAFGSAD----YRTYCYDLRNARAPWCVLAGHE--KAVSYVKFL-DSGTLVTA 974 (1056)
Q Consensus 908 ~~~~-~~~~V-----~sv~fsp~~~~~lasGs~D----g~V~lwDlr~~~~~~~~l~gH~--~~V~~l~fs-~~~~L~Sg 974 (1056)
.++. |.+.+ ....|++++. ++++++.| +.|+|||+++...++..+..+. +.+...... .+.++++|
T Consensus 203 ~tl~gH~g~~~s~~v~~~~fs~d~~-~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsG 281 (568)
T PTZ00420 203 SSFHIHDGGKNTKNIWIDGLGGDDN-YILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIG 281 (568)
T ss_pred EEEecccCCceeEEEEeeeEcCCCC-EEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEE
Confidence 8886 44433 3344568876 56655555 3799999998666666654332 233233333 35668899
Q ss_pred ECCCeEEEEECCC
Q 001548 975 STDNKLKLWDLKR 987 (1056)
Q Consensus 975 S~Dg~IkiWdl~~ 987 (1056)
+.|++|++|++..
T Consensus 282 kGD~tIr~~e~~~ 294 (568)
T PTZ00420 282 KGDGNCRYYQHSL 294 (568)
T ss_pred ECCCeEEEEEccC
Confidence 9999999999974
No 378
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.93 E-value=1.3e-25 Score=249.80 Aligned_cols=205 Identities=18% Similarity=0.132 Sum_probs=147.2
Q ss_pred hhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHH
Q 001548 265 MVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVD 343 (1056)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~QIl~gL~ 343 (1056)
.+....|||++.+........... ... ....|+++.+ +|.+++.... ..+++..++.++.||+.||.
T Consensus 54 ~l~~~~h~~i~~~~~~~~~~~~~~----~~~-------~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~ 121 (287)
T cd07838 54 QLESFEHPNIVRLLDVCHGPRTDR----ELK-------LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVD 121 (287)
T ss_pred HhhccCCCCcceEEEEEeeccCCC----Cce-------eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHH
Confidence 345557999988766544322110 001 1236777775 8999987643 35788899999999999999
Q ss_pred HhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccc
Q 001548 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (1056)
Q Consensus 344 ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 423 (1056)
|||++||+|+||||+||+++.++.+|++|||++.......
T Consensus 122 ~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~---------------------------------------- 161 (287)
T cd07838 122 FLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEM---------------------------------------- 161 (287)
T ss_pred HHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCCc----------------------------------------
Confidence 9999999999999999999999999999999886643100
Q ss_pred cccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCccc
Q 001548 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (1056)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 503 (1056)
......++..|+|||+
T Consensus 162 ----------------------------------------------------------------~~~~~~~~~~~~~PE~ 177 (287)
T cd07838 162 ----------------------------------------------------------------ALTSVVVTLWYRAPEV 177 (287)
T ss_pred ----------------------------------------------------------------ccccccccccccChHH
Confidence 0002346788999999
Q ss_pred ccCCCCCccchhHHHHHHHHHHhCCCCc---HHHHHHHHHhhccC-----------------CCCC--------CCCCCC
Q 001548 504 LSGGVCTTSSNIYSLGVLFFELFGRFDS---ERALAAAMSDLRDR-----------------ILPP--------SFLSEN 555 (1056)
Q Consensus 504 l~~~~~t~~sDIwSLGvlL~eLlt~f~~---~~~~~~~~~~~~~~-----------------~lp~--------~~~~~~ 555 (1056)
+.+..++.++|||||||++|||+++.+. .............- .++. .....+
T Consensus 178 ~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (287)
T cd07838 178 LLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEIC 257 (287)
T ss_pred hccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhh
Confidence 9998899999999999999999986332 22211111111100 0000 011334
Q ss_pred hhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 556 PKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 556 ~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
+.+.+||.+||++||.+||++.++++||||
T Consensus 258 ~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 258 EEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred HHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 667899999999999999999999999997
No 379
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.93 E-value=6.8e-24 Score=242.96 Aligned_cols=286 Identities=16% Similarity=0.176 Sum_probs=238.3
Q ss_pred ccccccccceeeecccccCCCCcEEEE-CCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcE
Q 001548 725 LLRDRENLFLAQQDQEIQNPTDRLGAF-FDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKI 803 (1056)
Q Consensus 725 ~l~gh~~~v~~~~~~~~~~~~~~ls~s-~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg~I 803 (1056)
.+.||.+-|.++.+ +.+..+.+| ..+.+++|+.++.++..++.. +.+.+..|-|.++++++|...|.+
T Consensus 368 ~~~GHR~dVRsl~v----S~d~~~~~Sga~~SikiWn~~t~kciRTi~~-------~y~l~~~Fvpgd~~Iv~G~k~Gel 436 (888)
T KOG0306|consen 368 EIGGHRSDVRSLCV----SSDSILLASGAGESIKIWNRDTLKCIRTITC-------GYILASKFVPGDRYIVLGTKNGEL 436 (888)
T ss_pred eeccchhheeEEEe----ecCceeeeecCCCcEEEEEccCcceeEEecc-------ccEEEEEecCCCceEEEeccCCce
Confidence 45689999988766 334445444 467899999999988877764 378999999999999999999999
Q ss_pred EEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCC-----Cce--EEEEe-----cCC
Q 001548 804 KIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACT-----GQT--VSHYI-----EHE 871 (1056)
Q Consensus 804 ~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t-----~~~--v~~~~-----~H~ 871 (1056)
.+||+... ........|.+.|.+++..|+ +..+++||.|.+|++||..- |.. +-.+. .-+
T Consensus 437 ~vfdlaS~-------~l~Eti~AHdgaIWsi~~~pD-~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ 508 (888)
T KOG0306|consen 437 QVFDLASA-------SLVETIRAHDGAIWSISLSPD-NKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELE 508 (888)
T ss_pred EEEEeehh-------hhhhhhhccccceeeeeecCC-CCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEecc
Confidence 99999752 222234479999999999999 88999999999999999731 211 11111 245
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEE-eCCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcce
Q 001548 872 KRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATI-KNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPW 950 (1056)
Q Consensus 872 ~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~-~~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~ 950 (1056)
..|.|+.++| |+.+||.+--|++|+||-+.+-+-..++ .|.=+|.|+..+|++. +++|||.|..|++|-+.-+.+ .
T Consensus 509 ddvL~v~~Sp-dgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSk-livTgSADKnVKiWGLdFGDC-H 585 (888)
T KOG0306|consen 509 DDVLCVSVSP-DGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSK-LIVTGSADKNVKIWGLDFGDC-H 585 (888)
T ss_pred ccEEEEEEcC-CCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcC-eEEeccCCCceEEeccccchh-h
Confidence 7899999999 9999999999999999999998866555 4778999999999997 999999999999999988876 5
Q ss_pred EEecCCCCCeEEEEEcCCCE-EEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCC
Q 001548 951 CVLAGHEKAVSYVKFLDSGT-LVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSD 1029 (1056)
Q Consensus 951 ~~l~gH~~~V~~l~fs~~~~-L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g 1029 (1056)
..+.+|..+|.+|.|.|..+ +.|||.|+.||-||-.+. .++.++.||..+|.+++ .+|+|
T Consensus 586 KS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kF--------e~iq~L~~H~~ev~cLa-----------v~~~G 646 (888)
T KOG0306|consen 586 KSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKF--------EEIQKLDGHHSEVWCLA-----------VSPNG 646 (888)
T ss_pred hhhhcccCceeEEEEcccceeEEEecCcceEEeechhhh--------hhheeeccchheeeeeE-----------EcCCC
Confidence 77889999999999996554 889999999999998743 67899999999999999 78899
Q ss_pred CEEEEEEcCCcEEEEeCCCCeE
Q 001548 1030 CWLLLVCFDFTTLSFRTSWGCL 1051 (1056)
Q Consensus 1030 ~~l~s~s~D~~v~iW~v~~~~~ 1051 (1056)
.+++++|-|.++++|...--.+
T Consensus 647 ~~vvs~shD~sIRlwE~tde~~ 668 (888)
T KOG0306|consen 647 SFVVSSSHDKSIRLWERTDEIL 668 (888)
T ss_pred CeEEeccCCceeEeeeccCcce
Confidence 9999999999999998654333
No 380
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=5.9e-26 Score=272.22 Aligned_cols=179 Identities=17% Similarity=0.150 Sum_probs=152.2
Q ss_pred ccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccC
Q 001548 306 QGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASL 385 (1056)
Q Consensus 306 ~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~ 385 (1056)
+|+|++||+|..+|.+.+ .+++.-+++|+..|+.||+-||++|+|||||||+||||+.+|+||++|||.|-.+..++.
T Consensus 153 VMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~- 230 (1317)
T KOG0612|consen 153 VMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGT- 230 (1317)
T ss_pred EEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCc-
Confidence 999999999999998887 788889999999999999999999999999999999999999999999999876652210
Q ss_pred CCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccC
Q 001548 386 DIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNA 465 (1056)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~ 465 (1056)
T Consensus 231 -------------------------------------------------------------------------------- 230 (1317)
T KOG0612|consen 231 -------------------------------------------------------------------------------- 230 (1317)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCccccccccccccccccccCCCccCcccccC-----CCCCccchhHHHHHHHHHHhC---CCCcHHHHHH
Q 001548 466 GFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-----GVCTTSSNIYSLGVLFFELFG---RFDSERALAA 537 (1056)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-----~~~t~~sDIwSLGvlL~eLlt---~f~~~~~~~~ 537 (1056)
.. ....+|||-|.|||+|.. +.|++.+|+|||||++||||+ ||..+.-...
T Consensus 231 --------------------V~-s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveT 289 (1317)
T KOG0612|consen 231 --------------------VR-SSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVET 289 (1317)
T ss_pred --------------------EE-eccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHH
Confidence 00 116799999999999963 568999999999999999995 5888877777
Q ss_pred HHHhhccC---CCCCCCCCCChhHHHHHHhccccCCCCCCC---HHHHhhhhhhhhhh
Q 001548 538 AMSDLRDR---ILPPSFLSENPKEAGFCLWQLHPEPLSRPT---TREILQSEVTNEFQ 589 (1056)
Q Consensus 538 ~~~~~~~~---~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt---~~eil~~~~~~~~~ 589 (1056)
+-+++.+. .+| .....++...+||.++|. +|..|.. +.+|..||||.+..
T Consensus 290 Y~KIm~hk~~l~FP-~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~ 345 (1317)
T KOG0612|consen 290 YGKIMNHKESLSFP-DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGID 345 (1317)
T ss_pred HHHHhchhhhcCCC-cccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCC
Confidence 76666653 345 445589999999999995 7888888 99999999998754
No 381
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.93 E-value=1.4e-25 Score=245.58 Aligned_cols=236 Identities=17% Similarity=0.129 Sum_probs=161.9
Q ss_pred cccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccc
Q 001548 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1056)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1056)
+|.|.||++...++.. ...+.........+ .-......++...||+++.+.........
T Consensus 15 g~~g~v~~~~~~~~~~-----~~~k~~~~~~~~~~--~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-------------- 73 (256)
T cd05112 15 GQFGLVWLGYWLEKRK-----VAIKTIREGAMSEE--DFIEEAQVMMKLSHPKLVQLYGVCTERSP-------------- 73 (256)
T ss_pred cccceEEEEEEeCCCe-----EEEEECCCCCCCHH--HHHHHHHHHHhCCCCCeeeEEEEEccCCc--------------
Confidence 4779999986532111 11111111111111 12223456777789998876544221110
Q ss_pred cCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhccc
Q 001548 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1056)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~ 380 (1056)
-..+++++.|++|.+++......++...++.++.|++.||.|||++||+|+||||+||+++.++.+|++|||+++...
T Consensus 74 --~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~ 151 (256)
T cd05112 74 --ICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVL 151 (256)
T ss_pred --eEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecc
Confidence 124899999999999997765567777899999999999999999999999999999999999999999999886543
Q ss_pred ccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCccc
Q 001548 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1056)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~ 460 (1056)
....
T Consensus 152 ~~~~---------------------------------------------------------------------------- 155 (256)
T cd05112 152 DDQY---------------------------------------------------------------------------- 155 (256)
T ss_pred cCcc----------------------------------------------------------------------------
Confidence 1000
Q ss_pred ccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHH
Q 001548 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALA 536 (1056)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~ 536 (1056)
.......++..|+|||.+.+..++.++|||||||++|||++ + |.... ..
T Consensus 156 --------------------------~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-~~ 208 (256)
T cd05112 156 --------------------------TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRS-NS 208 (256)
T ss_pred --------------------------cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCC-HH
Confidence 00001224567999999998889999999999999999997 4 32221 12
Q ss_pred HHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001548 537 AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 537 ~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~ 582 (1056)
.....+.....+......+..+.+|+.+||+++|.+||++.++++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 209 EVVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 2222333222211222346778899999999999999999999874
No 382
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.93 E-value=2e-25 Score=250.39 Aligned_cols=248 Identities=19% Similarity=0.221 Sum_probs=172.3
Q ss_pred HHhhhccccceeeeCCCC-CccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCC
Q 001548 215 FVKTTLKGKGIVCRGPPL-NAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGART 293 (1056)
Q Consensus 215 ~~k~~~~g~Gvv~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (1056)
..+...++.|.||++... ++..+ ..+ +...........-......++...|+|++.+......+..
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v-----~iK-~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~------- 91 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLV-----AVK-KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDE------- 91 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEE-----EEE-EecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCE-------
Confidence 345666788999998652 11111 111 1111111111111112346777889999876654332211
Q ss_pred CCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCc
Q 001548 294 GVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGP 373 (1056)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Df 373 (1056)
...+|+|++|++|.+++... .+++..++.++.||+.||.|||++||+|+||||+||+++.++.++++||
T Consensus 92 ---------~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~df 160 (292)
T cd06657 92 ---------LWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDF 160 (292)
T ss_pred ---------EEEEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEccc
Confidence 12489999999999988543 4677789999999999999999999999999999999999999999999
Q ss_pred chhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCC
Q 001548 374 IIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPH 453 (1056)
Q Consensus 374 gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~ 453 (1056)
|++.......
T Consensus 161 g~~~~~~~~~---------------------------------------------------------------------- 170 (292)
T cd06657 161 GFCAQVSKEV---------------------------------------------------------------------- 170 (292)
T ss_pred ccceeccccc----------------------------------------------------------------------
Confidence 9875533100
Q ss_pred CCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCC---CC
Q 001548 454 SHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FD 530 (1056)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~ 530 (1056)
.......|++.|+|||.+.+..++.++|+|||||++|+|+++ |.
T Consensus 171 ---------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~ 217 (292)
T cd06657 171 ---------------------------------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF 217 (292)
T ss_pred ---------------------------------ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 000134578889999999888899999999999999999986 32
Q ss_pred cHHHHHHHHHhhccCCCCC---CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhhh
Q 001548 531 SERALAAAMSDLRDRILPP---SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (1056)
Q Consensus 531 ~~~~~~~~~~~~~~~~lp~---~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~~ 591 (1056)
..... .....+... +++ .....++.+.+|+.+||+++|.+||++.+++.||||.....+
T Consensus 218 ~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~~ 279 (292)
T cd06657 218 NEPPL-KAMKMIRDN-LPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 279 (292)
T ss_pred CCCHH-HHHHHHHhh-CCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCCC
Confidence 22111 111122111 222 233567889999999999999999999999999999876543
No 383
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.93 E-value=2.1e-25 Score=244.43 Aligned_cols=231 Identities=16% Similarity=0.125 Sum_probs=163.5
Q ss_pred cccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccc
Q 001548 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1056)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1056)
++.|+||++...+...+ .+.... ... ....-.....+++...|+|++.+........
T Consensus 17 g~~g~v~~~~~~~~~v~------iK~~~~-~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--------------- 73 (256)
T cd05039 17 GEFGDVMLGDYRGQKVA------VKCLKD-DST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGN--------------- 73 (256)
T ss_pred CCCceEEEEEecCcEEE------EEEecc-chh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCC---------------
Confidence 46799999987432222 111111 111 1122223345677888999887655533211
Q ss_pred cCCCcccccCCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcc
Q 001548 301 IGGLRQGSSDHGVNLREWLNARGH-KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1056)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~-~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~ 379 (1056)
....+|+++++++|.++++.... .+++..++.++.|++.||.|||++||+|+||||+||+++.++.+|++|||+++..
T Consensus 74 -~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~ 152 (256)
T cd05039 74 -PLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEA 152 (256)
T ss_pred -CeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccccccc
Confidence 12248999999999999976543 5788899999999999999999999999999999999999999999999988664
Q ss_pred cccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcc
Q 001548 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1056)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~ 459 (1056)
....
T Consensus 153 ~~~~---------------------------------------------------------------------------- 156 (256)
T cd05039 153 SQGQ---------------------------------------------------------------------------- 156 (256)
T ss_pred cccc----------------------------------------------------------------------------
Confidence 3100
Q ss_pred cccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHH
Q 001548 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERAL 535 (1056)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~ 535 (1056)
.....+..|+|||.+.+..++.++|||||||++|||++ + |.... .
T Consensus 157 ------------------------------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-~ 205 (256)
T cd05039 157 ------------------------------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-L 205 (256)
T ss_pred ------------------------------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC-H
Confidence 01112345999999998889999999999999999996 4 22221 1
Q ss_pred HHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001548 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 536 ~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~ 582 (1056)
......+.....+......++.+.+|+.+||.++|++||++.+++..
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 252 (256)
T cd05039 206 KDVVPHVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQ 252 (256)
T ss_pred HHHHHHHhcCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 22222222222223334567889999999999999999999999864
No 384
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.93 E-value=1.1e-25 Score=250.46 Aligned_cols=203 Identities=17% Similarity=0.219 Sum_probs=148.1
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~QIl~g 341 (1056)
...+....|||++.+......+. . ....++|++ ++|.+++.... ..+++..++.++.||+.|
T Consensus 49 ~~~l~~l~~~~iv~~~~~~~~~~-----------~-----~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~ 111 (283)
T cd07835 49 ISLLKELNHPNIVRLLDVVHSEN-----------K-----LYLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQG 111 (283)
T ss_pred HHHHHhcCCCCccCHhheeccCC-----------e-----EEEEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHH
Confidence 34566778999987665532111 1 123777875 68999996654 357888999999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|+|||++|++|+||+|+||+++.++.++++|||+++......
T Consensus 112 L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~-------------------------------------- 153 (283)
T cd07835 112 IAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV-------------------------------------- 153 (283)
T ss_pred HHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc--------------------------------------
Confidence 999999999999999999999999999999999886543100
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
...+...++..|+||
T Consensus 154 -----------------------------------------------------------------~~~~~~~~~~~~~aP 168 (283)
T cd07835 154 -----------------------------------------------------------------RTYTHEVVTLWYRAP 168 (283)
T ss_pred -----------------------------------------------------------------cccCccccccCCCCC
Confidence 000123567889999
Q ss_pred ccccCC-CCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhcc---------------------------CCCCCC
Q 001548 502 EELSGG-VCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRD---------------------------RILPPS 550 (1056)
Q Consensus 502 E~l~~~-~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~---------------------------~~lp~~ 550 (1056)
|++.+. .++.++|||||||++|+|+++ |.............+. ......
T Consensus 169 E~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (283)
T cd07835 169 EILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKV 248 (283)
T ss_pred ceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhh
Confidence 988764 578999999999999999987 3222222211111110 000111
Q ss_pred CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 551 FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 551 ~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
....++.+.+|+.+||++||.+|||+.+++.||||
T Consensus 249 ~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 249 VPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred cCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 23456788899999999999999999999999997
No 385
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=1.5e-23 Score=218.96 Aligned_cols=305 Identities=18% Similarity=0.220 Sum_probs=235.9
Q ss_pred ccccccccccccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCC
Q 001548 721 ADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVS 800 (1056)
Q Consensus 721 ~~~~~l~gh~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~D 800 (1056)
.-...+.||.+-|-.++.. ....-.-+++.|.+.++|.+.++.|...+ .||.+.|+++.|++.+.+++|++.|
T Consensus 139 ~lvre~~GHkDGiW~Vaa~--~tqpi~gtASADhTA~iWs~Esg~CL~~Y-----~GH~GSVNsikfh~s~~L~lTaSGD 211 (481)
T KOG0300|consen 139 RLVRELEGHKDGIWHVAAD--STQPICGTASADHTARIWSLESGACLATY-----TGHTGSVNSIKFHNSGLLLLTASGD 211 (481)
T ss_pred eehhhhcccccceeeehhh--cCCcceeecccccceeEEeeccccceeee-----cccccceeeEEeccccceEEEccCC
Confidence 3455678888766544431 11222337889999999999998887655 4999999999999999999999999
Q ss_pred CcEEEEEcC----CCC--------------------C--C---Cccc---ccc-eEeecCCCCeEEEEEecCCCCEEEEE
Q 001548 801 KKIKIFEFN----ALF--------------------N--D---SVDV---YYP-AVEMSNRSKLSCVCWNNYIKNYLASA 847 (1056)
Q Consensus 801 g~I~Iwdl~----t~~--------------------~--~---~~~~---~~~-~~~~~h~~~V~~l~~~~~~~~~LaSg 847 (1056)
++..||... ... . + ..+. ..| ....+|.+.|.+..|-.. +..++++
T Consensus 212 ~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~g-g~Q~vTa 290 (481)
T KOG0300|consen 212 ETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAG-GQQMVTA 290 (481)
T ss_pred cchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcC-cceeeee
Confidence 999999731 100 0 0 0111 112 234579999999999887 8899999
Q ss_pred ECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCc-eeEEEe-CCCCeEEEEEccCC
Q 001548 848 DYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKN-SLATIK-NIANVCCVQFSAHS 925 (1056)
Q Consensus 848 s~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~-~~~~~~-~~~~V~sv~fsp~~ 925 (1056)
++|.+-.+||+++|..+..+.+|....+.++-+| ..+++++.|.|.+.++||.|..- .+..|. |...|+++.|.-+.
T Consensus 291 SWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHp-tQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd 369 (481)
T KOG0300|consen 291 SWDRTANLWDVETGEVVNILTGHDSELTHCSTHP-TQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDD 369 (481)
T ss_pred eccccceeeeeccCceeccccCcchhccccccCC-cceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCC
Confidence 9999999999999999999999999999999999 88999999999999999999543 445555 67789999999887
Q ss_pred CcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCC-EEEEEECCCeEEEEECCCCCCCCCCCCceeEEecC
Q 001548 926 SHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSG-TLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSG 1004 (1056)
Q Consensus 926 ~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs~~~-~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~g 1004 (1056)
+ +++||+|.+|++||+|+.+.|+.++.. ..+++.++.+.+. .|+.--....|++||++..-... -+-..-.|
T Consensus 370 ~--vVSgSDDrTvKvWdLrNMRsplATIRt-dS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaR----lPrtsRqg 442 (481)
T KOG0300|consen 370 R--VVSGSDDRTVKVWDLRNMRSPLATIRT-DSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLAR----LPRTSRQG 442 (481)
T ss_pred c--eeecCCCceEEEeeeccccCcceeeec-CCccceeEeecCCceEEeccCCceEEEEecCCCcccc----CCcccccc
Confidence 5 889999999999999999999888874 6789999999665 55556667889999997322110 11123358
Q ss_pred CCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCCe
Q 001548 1005 HTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWGC 1050 (1056)
Q Consensus 1005 H~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~~ 1050 (1056)
|.-.|.+.+..+ -+|- +-|.+||+|..+.-|++....
T Consensus 443 HrRMV~c~AW~e--------ehp~-cnLftcGFDR~v~gW~in~p~ 479 (481)
T KOG0300|consen 443 HRRMVTCCAWLE--------EHPA-CNLFTCGFDRMVAGWKINTPT 479 (481)
T ss_pred cceeeeeeeccc--------cCcc-cccccccccceeeeeEecccC
Confidence 888887666332 2333 567899999999999987654
No 386
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.93 E-value=1.3e-25 Score=252.01 Aligned_cols=207 Identities=14% Similarity=0.107 Sum_probs=154.8
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...++...|||++.+........ ....++++++|++|.+++.+. .++..+++.++.||+.||
T Consensus 67 ~~~l~~l~hp~i~~~~~~~~~~~----------------~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al 128 (293)
T cd06647 67 ILVMRENKHPNIVNYLDSYLVGD----------------ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQAL 128 (293)
T ss_pred HHHHhhcCCCCeeehhheeeeCC----------------cEEEEEecCCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHH
Confidence 34677788999887655432111 112488999999999999754 466778999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+|+||||+||+++.++.+|++|||++.......
T Consensus 129 ~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~--------------------------------------- 169 (293)
T cd06647 129 EFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--------------------------------------- 169 (293)
T ss_pred HHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccc---------------------------------------
Confidence 99999999999999999999999999999999876543100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......|++.|+|||
T Consensus 170 ----------------------------------------------------------------~~~~~~~~~~~y~~PE 185 (293)
T cd06647 170 ----------------------------------------------------------------SKRSTMVGTPYWMAPE 185 (293)
T ss_pred ----------------------------------------------------------------cccccccCChhhcCch
Confidence 0001345788899999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCCCC---cHHHHHHHHHhhccCC-CCCCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGRFD---SERALAAAMSDLRDRI-LPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~f~---~~~~~~~~~~~~~~~~-lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~e 578 (1056)
.+.+..++.++|+|||||++|+|+++.. ..............+. ..+.....++.+.+|+.+||..+|.+||++.+
T Consensus 186 ~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~ 265 (293)
T cd06647 186 VVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKE 265 (293)
T ss_pred hhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHH
Confidence 9998889999999999999999998733 3222222111111111 11122234677899999999999999999999
Q ss_pred Hhhhhhhhhhhh
Q 001548 579 ILQSEVTNEFQE 590 (1056)
Q Consensus 579 il~~~~~~~~~~ 590 (1056)
++.|+||.....
T Consensus 266 il~h~~~~~~~~ 277 (293)
T cd06647 266 LLQHPFLKIAKP 277 (293)
T ss_pred HhcCHHHhcCcc
Confidence 999999987653
No 387
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.93 E-value=1.3e-25 Score=257.16 Aligned_cols=214 Identities=19% Similarity=0.236 Sum_probs=153.4
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....||||+.+.+......... +.....+++++. ++|.++++..+ .+++..++.++.||+.||
T Consensus 55 ~~~l~~l~h~ni~~~~~~~~~~~~~~-----------~~~~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL 121 (337)
T cd07858 55 IKLLRHLDHENVIAIKDIMPPPHREA-----------FNDVYIVYELMD-TDLHQIIRSSQ-TLSDDHCQYFLYQLLRGL 121 (337)
T ss_pred HHHHHhcCCCCccchHHheecccccc-----------cCcEEEEEeCCC-CCHHHHHhcCC-CCCHHHHHHHHHHHHHHH
Confidence 45667778999998665433211100 001123677775 68999997654 477779999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 122 ~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~--------------------------------------- 162 (337)
T cd07858 122 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG--------------------------------------- 162 (337)
T ss_pred HHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCc---------------------------------------
Confidence 99999999999999999999999999999999886543100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......+|.+|+|||
T Consensus 163 ----------------------------------------------------------------~~~~~~~~~~~y~aPE 178 (337)
T cd07858 163 ----------------------------------------------------------------DFMTEYVVTRWYRAPE 178 (337)
T ss_pred ----------------------------------------------------------------ccccccccccCccChH
Confidence 0001345788899999
Q ss_pred cccC-CCCCccchhHHHHHHHHHHhCCCCcH---HH--HHHHHHhhcc------------------------C---CCCC
Q 001548 503 ELSG-GVCTTSSNIYSLGVLFFELFGRFDSE---RA--LAAAMSDLRD------------------------R---ILPP 549 (1056)
Q Consensus 503 ~l~~-~~~t~~sDIwSLGvlL~eLlt~f~~~---~~--~~~~~~~~~~------------------------~---~lp~ 549 (1056)
.+.+ ..++.++|||||||++|+|+++..++ +. ....+..... . .+..
T Consensus 179 ~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (337)
T cd07858 179 LLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFAR 258 (337)
T ss_pred HHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHH
Confidence 8875 46899999999999999999873322 11 0000000000 0 0011
Q ss_pred CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhhhc
Q 001548 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (1056)
Q Consensus 550 ~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~~~ 592 (1056)
.....++.+.+|+.+||+++|++|||+.++++||||.......
T Consensus 259 ~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~ 301 (337)
T cd07858 259 LFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPS 301 (337)
T ss_pred HcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcc
Confidence 2345678889999999999999999999999999998765554
No 388
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.93 E-value=1.8e-25 Score=242.55 Aligned_cols=201 Identities=16% Similarity=0.221 Sum_probs=152.1
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....||+++.+......+. ....++++++|++|.+++......++...+..++.||+.||
T Consensus 48 ~~~l~~l~~~~i~~~~~~~~~~~----------------~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l 111 (253)
T cd05122 48 IQILKKCKHPNIVKYYGSYLKKD----------------ELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGL 111 (253)
T ss_pred HHHHHhCCCCCEeEEEEEEecCC----------------eEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHH
Confidence 44566777999887555433221 12248899999999999977655678889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||.+|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 112 ~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~--------------------------------------- 152 (253)
T cd05122 112 EYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK--------------------------------------- 152 (253)
T ss_pred HHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccc---------------------------------------
Confidence 99999999999999999999999999999999876643100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
. .....++..|+|||
T Consensus 153 --------------------------------------------------------------~---~~~~~~~~~~~~PE 167 (253)
T cd05122 153 --------------------------------------------------------------A---RNTMVGTPYWMAPE 167 (253)
T ss_pred --------------------------------------------------------------c---ccceecCCcccCHH
Confidence 0 01345677899999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCC--CCChhHHHHHHhccccCCCCCCCHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFL--SENPKEAGFCLWQLHPEPLSRPTTR 577 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~--~~~~~~~~li~~lL~~dP~~Rpt~~ 577 (1056)
.+.+..++.++|+|||||++|+|+++ |.............. ...+.... ..+..+.+|+.+||..||++|||+.
T Consensus 168 ~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ 246 (253)
T cd05122 168 VINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT-NGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAE 246 (253)
T ss_pred HHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh-cCCCCcCcccccCHHHHHHHHHHccCChhhCCCHH
Confidence 99988899999999999999999986 332212222222111 22222111 2267789999999999999999999
Q ss_pred HHhhhhh
Q 001548 578 EILQSEV 584 (1056)
Q Consensus 578 eil~~~~ 584 (1056)
++++|||
T Consensus 247 ~~l~~~~ 253 (253)
T cd05122 247 QLLKHPF 253 (253)
T ss_pred HHhcCCC
Confidence 9999998
No 389
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.93 E-value=4.5e-26 Score=233.84 Aligned_cols=257 Identities=15% Similarity=0.094 Sum_probs=167.5
Q ss_pred HHHhhhcc--ccceeeeCC--CCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCC
Q 001548 214 FFVKTTLK--GKGIVCRGP--PLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1056)
Q Consensus 214 ~~~k~~~~--g~Gvv~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1056)
|.|.+.|+ |+--||.++ ..+.+|+ -+++.+.. ..+..+.-..+..-+.-++||++.+.+-.+-... |
T Consensus 23 yri~~~LgeGGfsfv~LV~~~s~~~~YA-lKkI~c~~------~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~-D- 93 (302)
T KOG2345|consen 23 YRIQRLLGEGGFSFVDLVKGLSTGHLYA-LKKILCHS------QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEK-D- 93 (302)
T ss_pred EEEeeeecCCCceeeeeecccCcccchh-hheeeccc------hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhc-c-
Confidence 44444444 666666554 4444555 33333311 1222222223334555577888765443221110 0
Q ss_pred CcCCCCCcccccCCCcccccCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhhhcC--cccccCCCCCEEEcc
Q 001548 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVALVDYHHTQG--VTFLDLKPSSFKLLQ 364 (1056)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~QIl~gL~ylHs~g--IvHrDLKP~NILl~~ 364 (1056)
+. +.-..+..|+..|+|.+.|+. .|..+++.+++.||.+|++||.+||... ++||||||.|||+..
T Consensus 94 -------~~--~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~ 164 (302)
T KOG2345|consen 94 -------GK--HEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSD 164 (302)
T ss_pred -------Cc--eeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecC
Confidence 00 112246778899999998844 5668999999999999999999999999 999999999999999
Q ss_pred CCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccc
Q 001548 365 SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANES 444 (1056)
Q Consensus 365 ~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (1056)
++.+++.|||.+....-..
T Consensus 165 ~~~~vl~D~GS~~~a~i~i------------------------------------------------------------- 183 (302)
T KOG2345|consen 165 SGLPVLMDLGSATQAPIQI------------------------------------------------------------- 183 (302)
T ss_pred CCceEEEeccCccccceEe-------------------------------------------------------------
Confidence 9999999999886643000
Q ss_pred cccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccC---CCCCccchhHHHHHH
Q 001548 445 DINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG---GVCTTSSNIYSLGVL 521 (1056)
Q Consensus 445 ~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~---~~~t~~sDIwSLGvl 521 (1056)
..+......+.-.....|..|+|||.+.- ...+.++|||||||+
T Consensus 184 ---------------------------------~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCt 230 (302)
T KOG2345|consen 184 ---------------------------------EGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCT 230 (302)
T ss_pred ---------------------------------echHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHH
Confidence 00000112233335667888999999875 346899999999999
Q ss_pred HHHHhCCCCcHHHHHHH-----HHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001548 522 FFELFGRFDSERALAAA-----MSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 522 L~eLlt~f~~~~~~~~~-----~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~ 582 (1056)
||+|+.+-.+++..... ........-.|.-...+..+..|+.+||+.||.+||++.+++.+
T Consensus 231 LYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 231 LYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred HHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 99999764444332221 11112112223333478889999999999999999999999874
No 390
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.93 E-value=2.1e-25 Score=247.98 Aligned_cols=240 Identities=17% Similarity=0.155 Sum_probs=163.3
Q ss_pred ccccceeeeCCCCCc-cccccccccccccccccCCchhHHHHhhhhhhccCC-CCCCCcccceeeecCCCCCCcCCCCCc
Q 001548 220 LKGKGIVCRGPPLNA-FKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNA-SPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1056)
Q Consensus 220 ~~g~Gvv~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1056)
.+|.|.||+|...+. ..+ ..+.........+..........+.... |||++.+......+..
T Consensus 9 ~g~~g~v~~~~~~~~~~~~-----~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~----------- 72 (283)
T cd07830 9 DGTFGSVYLARNKETGELV-----AIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDE----------- 72 (283)
T ss_pred cCCceEEEEEEECCCCcEE-----EEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCc-----------
Confidence 457899999987421 111 1111111111112222222334555666 9999876655432111
Q ss_pred ccccCCCcccccCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchh
Q 001548 298 SCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1056)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla 376 (1056)
-..+|+++ +++|.+++.... ..++...++.++.||+.+|.|||++||+|+||||+||+++.++.++++|||++
T Consensus 73 -----~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~ 146 (283)
T cd07830 73 -----LYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLA 146 (283)
T ss_pred -----EEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccc
Confidence 12488888 889999887654 56788899999999999999999999999999999999999999999999987
Q ss_pred hcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCC
Q 001548 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1056)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~ 456 (1056)
+.....
T Consensus 147 ~~~~~~-------------------------------------------------------------------------- 152 (283)
T cd07830 147 REIRSR-------------------------------------------------------------------------- 152 (283)
T ss_pred eeccCC--------------------------------------------------------------------------
Confidence 654310
Q ss_pred CcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccC-CCCCccchhHHHHHHHHHHhCC---CCcH
Q 001548 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSE 532 (1056)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~t~~sDIwSLGvlL~eLlt~---f~~~ 532 (1056)
...+...++..|+|||++.+ ..++.++|||||||++|||+++ |+..
T Consensus 153 ------------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~ 202 (283)
T cd07830 153 ------------------------------PPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGS 202 (283)
T ss_pred ------------------------------CCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCC
Confidence 00013457888999998865 4578999999999999999986 3222
Q ss_pred HHHHHHHHhhc--------------------cCCCC--------CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhh
Q 001548 533 RALAAAMSDLR--------------------DRILP--------PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEV 584 (1056)
Q Consensus 533 ~~~~~~~~~~~--------------------~~~lp--------~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~ 584 (1056)
........... ...++ ..+...++.+.+|+.+||+.||.+|||+.|++.|||
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~ 282 (283)
T cd07830 203 SEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPY 282 (283)
T ss_pred ChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCC
Confidence 21111111100 00001 112233577899999999999999999999999999
Q ss_pred h
Q 001548 585 T 585 (1056)
Q Consensus 585 ~ 585 (1056)
|
T Consensus 283 ~ 283 (283)
T cd07830 283 F 283 (283)
T ss_pred C
Confidence 7
No 391
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.93 E-value=2e-26 Score=249.69 Aligned_cols=195 Identities=18% Similarity=0.217 Sum_probs=147.3
Q ss_pred cccCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccC
Q 001548 307 GSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASL 385 (1056)
Q Consensus 307 ~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~ 385 (1056)
..+..|-++.++|+.++ ..++...++.+.+||+.+|.|||+.+++|.||||+|||+.++...+.-.-+...
T Consensus 169 vfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~-------- 240 (415)
T KOG0671|consen 169 VFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKV-------- 240 (415)
T ss_pred EEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCcc--------
Confidence 45668889999997744 467778999999999999999999999999999999999888777764332210
Q ss_pred CCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccC
Q 001548 386 DIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNA 465 (1056)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~ 465 (1056)
+..+......+++.|||.|+.+....
T Consensus 241 ------------------------------------------------~~~r~~ks~~I~vIDFGsAtf~~e~h------ 266 (415)
T KOG0671|consen 241 ------------------------------------------------CFIRPLKSTAIKVIDFGSATFDHEHH------ 266 (415)
T ss_pred ------------------------------------------------ceeccCCCcceEEEecCCcceeccCc------
Confidence 00111122356788999887665422
Q ss_pred CCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCC---CCcHH--HHHHHHH
Q 001548 466 GFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER--ALAAAMS 540 (1056)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~--~~~~~~~ 540 (1056)
+..+.|..|+|||++.|-+++.++||||+||||+||.+| |.+.+ ++.++|.
T Consensus 267 ------------------------s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMe 322 (415)
T KOG0671|consen 267 ------------------------STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMME 322 (415)
T ss_pred ------------------------ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHH
Confidence 267889999999999999999999999999999999998 44432 4445555
Q ss_pred hhccCCCCCC----------------------------------------CCC---CChhHHHHHHhccccCCCCCCCHH
Q 001548 541 DLRDRILPPS----------------------------------------FLS---ENPKEAGFCLWQLHPEPLSRPTTR 577 (1056)
Q Consensus 541 ~~~~~~lp~~----------------------------------------~~~---~~~~~~~li~~lL~~dP~~Rpt~~ 577 (1056)
.+.+ ++|.. ... +..++.+|+++||..||.+|+|++
T Consensus 323 rIlG-p~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~ 401 (415)
T KOG0671|consen 323 RILG-PIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLR 401 (415)
T ss_pred HhhC-CCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHH
Confidence 5444 22211 001 112367999999999999999999
Q ss_pred HHhhhhhhhhh
Q 001548 578 EILQSEVTNEF 588 (1056)
Q Consensus 578 eil~~~~~~~~ 588 (1056)
|+|.||||+..
T Consensus 402 EAL~HpFF~~~ 412 (415)
T KOG0671|consen 402 EALSHPFFARL 412 (415)
T ss_pred HHhcCHHhhcC
Confidence 99999999875
No 392
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.93 E-value=1.8e-25 Score=243.78 Aligned_cols=203 Identities=21% Similarity=0.240 Sum_probs=157.0
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR---GHKGKRIECLYIFRQIV 339 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~---~~~~~~~~~~~i~~QIl 339 (1056)
...++..+|||++.+........ . ...++++++|++|.+++... +..++...+..++.||+
T Consensus 50 ~~~l~~l~~~~~~~~~~~~~~~~-----------~-----~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~ 113 (258)
T cd08215 50 VKILKKLNHPNIIKYYESFEEKG-----------K-----LCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLC 113 (258)
T ss_pred HHHHHhcCCCChhheEEEEecCC-----------E-----EEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHH
Confidence 34567778999887554432211 1 12488999999999999775 36688889999999999
Q ss_pred HHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccc
Q 001548 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (1056)
Q Consensus 340 ~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 419 (1056)
.||.|||++||+|+||+|+||+++.++.++++|||++.......
T Consensus 114 ~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~------------------------------------ 157 (258)
T cd08215 114 LALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV------------------------------------ 157 (258)
T ss_pred HHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc------------------------------------
Confidence 99999999999999999999999999999999999886543100
Q ss_pred cccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCcc
Q 001548 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (1056)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 499 (1056)
.......|++.|+
T Consensus 158 -------------------------------------------------------------------~~~~~~~~~~~y~ 170 (258)
T cd08215 158 -------------------------------------------------------------------DLAKTVVGTPYYL 170 (258)
T ss_pred -------------------------------------------------------------------ceecceeeeeccc
Confidence 0001345788899
Q ss_pred CcccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCH
Q 001548 500 SPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT 576 (1056)
Q Consensus 500 APE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~ 576 (1056)
|||.+.+..++.++|+||||+++|+|+++ |.... .......+....+++.....+..+.+++.+||..+|.+||++
T Consensus 171 ~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~ 249 (258)
T cd08215 171 SPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN-LLELALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSI 249 (258)
T ss_pred ChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc-HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence 99999988899999999999999999987 32222 222333333333444444667889999999999999999999
Q ss_pred HHHhhhhhh
Q 001548 577 REILQSEVT 585 (1056)
Q Consensus 577 ~eil~~~~~ 585 (1056)
.++|+||||
T Consensus 250 ~~ll~~~~~ 258 (258)
T cd08215 250 AQILQSPFI 258 (258)
T ss_pred HHHhcCCCC
Confidence 999999997
No 393
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.93 E-value=9.9e-26 Score=278.25 Aligned_cols=220 Identities=21% Similarity=0.219 Sum_probs=149.7
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC----------CCCCHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG----------HKGKRIECL 332 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~----------~~~~~~~~~ 332 (1056)
...+....|||++.+......+... ..+|+|++|++|.++|.... ...+...++
T Consensus 53 i~ILs~L~HPNIVkl~~v~~d~~~l----------------yLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL 116 (932)
T PRK13184 53 AKIAADLIHPGIVPVYSICSDGDPV----------------YYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFL 116 (932)
T ss_pred HHHHHhCCCcCcCeEEEEEeeCCEE----------------EEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHH
Confidence 5567788999999876553322111 13899999999999996421 123445678
Q ss_pred HHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccc
Q 001548 333 YIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASA 412 (1056)
Q Consensus 333 ~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (1056)
.++.||+.||+|||++||+||||||+|||++.++.+|++|||+++.......... . .
T Consensus 117 ~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~-~------------------l---- 173 (932)
T PRK13184 117 SIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLL-D------------------I---- 173 (932)
T ss_pred HHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcceeccccccccc-c------------------c----
Confidence 9999999999999999999999999999999999999999999987531100000 0 0
Q ss_pred ccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCcccccccccccccccc
Q 001548 413 KKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQ 492 (1056)
Q Consensus 413 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (1056)
.....+. ...........
T Consensus 174 --------------------------------~~~~~~s------------------------------~~s~~t~~g~~ 191 (932)
T PRK13184 174 --------------------------------DVDERNI------------------------------CYSSMTIPGKI 191 (932)
T ss_pred --------------------------------ccccccc------------------------------cccccccCCCC
Confidence 0000000 00000011145
Q ss_pred ccCCCccCcccccCCCCCccchhHHHHHHHHHHhCCCCcH---HHHHHHHHh-hccCCCCCCCCCCChhHHHHHHhcccc
Q 001548 493 LEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSE---RALAAAMSD-LRDRILPPSFLSENPKEAGFCLWQLHP 568 (1056)
Q Consensus 493 ~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~f~~~---~~~~~~~~~-~~~~~lp~~~~~~~~~~~~li~~lL~~ 568 (1056)
+||+.|+|||++.+..++.++|||||||++|||++|..++ ......... +........+...++.+.+++.+||++
T Consensus 192 vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~ 271 (932)
T PRK13184 192 VGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAV 271 (932)
T ss_pred CCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccC
Confidence 7999999999999999999999999999999999873332 221111111 111111112335678889999999999
Q ss_pred CCCCCCCHHHHhhhh
Q 001548 569 EPLSRPTTREILQSE 583 (1056)
Q Consensus 569 dP~~Rpt~~eil~~~ 583 (1056)
||.+||+..+.+...
T Consensus 272 DP~kR~ss~eeLl~~ 286 (932)
T PRK13184 272 DPAERYSSVQELKQD 286 (932)
T ss_pred ChhhCcCHHHHHHHH
Confidence 999998877766554
No 394
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.93 E-value=1.4e-25 Score=249.21 Aligned_cols=203 Identities=19% Similarity=0.263 Sum_probs=150.6
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...++...||+++.+......... -..+++++++ +|.+++......++...++.++.||+.||
T Consensus 49 ~~~l~~l~~~~i~~~~~~~~~~~~----------------~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l 111 (283)
T cd05118 49 IKLLKELNHPNIIKLLDVFRHKGD----------------LYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGL 111 (283)
T ss_pred HHHHHHhcCCCcchHHHhhccCCC----------------EEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHH
Confidence 345667779999876655332211 1137788875 89998877656778889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+|+||||+||+++.++.+|++|||.+.......
T Consensus 112 ~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--------------------------------------- 152 (283)
T cd05118 112 AFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--------------------------------------- 152 (283)
T ss_pred HHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc---------------------------------------
Confidence 99999999999999999999999999999999876543100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......++.+|+|||
T Consensus 153 ----------------------------------------------------------------~~~~~~~~~~~~~~PE 168 (283)
T cd05118 153 ----------------------------------------------------------------RPYTHYVVTRWYRAPE 168 (283)
T ss_pred ----------------------------------------------------------------ccccCccCcccccCcH
Confidence 0011345778899999
Q ss_pred cccCC-CCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhcc--CC--------------------------CCCC
Q 001548 503 ELSGG-VCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRD--RI--------------------------LPPS 550 (1056)
Q Consensus 503 ~l~~~-~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~--~~--------------------------lp~~ 550 (1056)
.+.+. .++.++|||||||++|+|+++ |............... .. .+..
T Consensus 169 ~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (283)
T cd05118 169 LLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKL 248 (283)
T ss_pred HHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHh
Confidence 99876 789999999999999999987 3332222211111110 00 0011
Q ss_pred CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 551 FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 551 ~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
....+.++.+||.+||++||.+||++.+++.||||
T Consensus 249 ~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 249 FPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred hhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 22356788999999999999999999999999997
No 395
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.93 E-value=2.8e-25 Score=244.05 Aligned_cols=206 Identities=20% Similarity=0.187 Sum_probs=152.7
Q ss_pred hhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Q 001548 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (1056)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ 343 (1056)
..++...|+||+.+......... -..++++++|++|.+++...+ .+++..++.++.||+.||.
T Consensus 51 ~~~~~l~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~ 113 (264)
T cd06626 51 KVLELLKHPNLVKYYGVEVHREK----------------VYIFMEYCSGGTLEELLEHGR-ILDEHVIRVYTLQLLEGLA 113 (264)
T ss_pred HHHHhCCCCChhheeeeEecCCE----------------EEEEEecCCCCcHHHHHhhcC-CCChHHHHHHHHHHHHHHH
Confidence 45777789998876655321111 123889999999999997654 4677789999999999999
Q ss_pred HhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccc
Q 001548 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (1056)
Q Consensus 344 ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 423 (1056)
|||+.||+|+||||+||+++.++.+|++|||++.........
T Consensus 114 ~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~-------------------------------------- 155 (264)
T cd06626 114 YLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT-------------------------------------- 155 (264)
T ss_pred HHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCc--------------------------------------
Confidence 999999999999999999999999999999998765411000
Q ss_pred cccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCccc
Q 001548 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (1056)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 503 (1056)
.........++..|+|||.
T Consensus 156 -------------------------------------------------------------~~~~~~~~~~~~~~~~PE~ 174 (264)
T cd06626 156 -------------------------------------------------------------MGEEVQSLAGTPAYMAPEV 174 (264)
T ss_pred -------------------------------------------------------------ccccccCCcCCcCccChhh
Confidence 0000012456778999999
Q ss_pred ccCCC---CCccchhHHHHHHHHHHhCCCCcH---HHHHHHHHhhccCCCC--CCCCCCChhHHHHHHhccccCCCCCCC
Q 001548 504 LSGGV---CTTSSNIYSLGVLFFELFGRFDSE---RALAAAMSDLRDRILP--PSFLSENPKEAGFCLWQLHPEPLSRPT 575 (1056)
Q Consensus 504 l~~~~---~t~~sDIwSLGvlL~eLlt~f~~~---~~~~~~~~~~~~~~lp--~~~~~~~~~~~~li~~lL~~dP~~Rpt 575 (1056)
+.+.. ++.++|||||||++|||+++..++ .........+.....+ |.....++.+.+|+.+||+.+|.+||+
T Consensus 175 ~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~ 254 (264)
T cd06626 175 ITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPT 254 (264)
T ss_pred ccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCC
Confidence 98866 899999999999999999873332 1122222222222222 223344788899999999999999999
Q ss_pred HHHHhhhhhh
Q 001548 576 TREILQSEVT 585 (1056)
Q Consensus 576 ~~eil~~~~~ 585 (1056)
+.+++.|||+
T Consensus 255 ~~~i~~~~~~ 264 (264)
T cd06626 255 ASELLQHPFV 264 (264)
T ss_pred HHHHhcCCCC
Confidence 9999999996
No 396
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.93 E-value=3.2e-25 Score=242.30 Aligned_cols=244 Identities=17% Similarity=0.148 Sum_probs=167.6
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCCc-hhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcc
Q 001548 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS-DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1056)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1056)
.+|+|+||++...+...........+.. ...... ....-......+....||+++.+......+..
T Consensus 9 ~g~~g~v~~~~~~~~~~~~~~~vaiK~~-~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~------------ 75 (258)
T smart00219 9 EGAFGEVYKGTLKGLSGEKEVEVAVKTL-KEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEP------------ 75 (258)
T ss_pred cCCCcceEEEEecCCCCCCCceEEEEEc-cCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCe------------
Confidence 3578999999875421000011111111 111111 11111222456667789998876655332211
Q ss_pred cccCCCcccccCCCCCHHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhh
Q 001548 299 CWIGGLRQGSSDHGVNLREWLNARGHK-GKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1056)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~-~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~ 377 (1056)
....|+++.|++|.+++...... +++..++.++.||+.||.|||+.||+|+||||+||+++.++.++++|||+++
T Consensus 76 ----~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~ 151 (258)
T smart00219 76 ----LMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSR 151 (258)
T ss_pred ----eEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCce
Confidence 12389999999999999765444 7888999999999999999999999999999999999999999999999887
Q ss_pred cccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCC
Q 001548 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1056)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~ 457 (1056)
........
T Consensus 152 ~~~~~~~~------------------------------------------------------------------------ 159 (258)
T smart00219 152 DLYDDDYY------------------------------------------------------------------------ 159 (258)
T ss_pred eccccccc------------------------------------------------------------------------
Confidence 65411000
Q ss_pred cccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-CCCcH--HH
Q 001548 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSE--RA 534 (1056)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~f~~~--~~ 534 (1056)
.. ....+++.|+|||.+.+..++.++|||||||++|+|++ +..+. ..
T Consensus 160 ----------------------------~~--~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~ 209 (258)
T smart00219 160 ----------------------------KK--KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS 209 (258)
T ss_pred ----------------------------cc--ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 00 01125677999999988889999999999999999997 32222 12
Q ss_pred HHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001548 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 535 ~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~ 582 (1056)
.......+.....++.....+..+.+++.+||..||.+|||+.++++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 257 (258)
T smart00219 210 NEEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEI 257 (258)
T ss_pred HHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhh
Confidence 223333333333444445578889999999999999999999999863
No 397
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.93 E-value=9.2e-26 Score=247.55 Aligned_cols=201 Identities=15% Similarity=0.111 Sum_probs=153.8
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...++...|||++.+......... ...+++++.|++|.+++... ..+++..+..++.||+.||
T Consensus 51 ~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l 113 (258)
T cd05578 51 RRILQELNHPFLVNLWYSFQDEEN----------------MYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLAL 113 (258)
T ss_pred HHHHHhCCCCChHHHHHhhcCCCe----------------EEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHH
Confidence 456778899999876544321111 12388999999999999776 4567779999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||.+||+|+||||+||+++.++.++++|||++.......
T Consensus 114 ~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--------------------------------------- 154 (258)
T cd05578 114 EYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT--------------------------------------- 154 (258)
T ss_pred HHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc---------------------------------------
Confidence 99999999999999999999999999999999876543100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
......|+..|+|||
T Consensus 155 -----------------------------------------------------------------~~~~~~~~~~y~~PE 169 (258)
T cd05578 155 -----------------------------------------------------------------LTTSTSGTPGYMAPE 169 (258)
T ss_pred -----------------------------------------------------------------cccccCCChhhcCHH
Confidence 000334677899999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCCCCc---HHH--HHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCH-
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGRFDS---ERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT- 576 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~f~~---~~~--~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~- 576 (1056)
.+.+..++.++|+|||||++|+|++|..+ ... .......... ..+......++.+.+++.+||..||.+||++
T Consensus 170 ~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~ 248 (258)
T cd05578 170 VLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET-ADVLYPATWSTEAIDAINKLLERDPQKRLGDN 248 (258)
T ss_pred HHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc-ccccCcccCcHHHHHHHHHHccCChhHcCCcc
Confidence 99988899999999999999999987322 221 2222222221 2223333456889999999999999999999
Q ss_pred -HHHhhhhhh
Q 001548 577 -REILQSEVT 585 (1056)
Q Consensus 577 -~eil~~~~~ 585 (1056)
.|++.||||
T Consensus 249 ~~~l~~~~~~ 258 (258)
T cd05578 249 LKDLKNHPYF 258 (258)
T ss_pred HHHHhcCCCC
Confidence 999999997
No 398
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=7.1e-26 Score=259.19 Aligned_cols=240 Identities=23% Similarity=0.212 Sum_probs=166.9
Q ss_pred hhccccceeeeCCCCCccccccccccccccccccCCc-hhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCC
Q 001548 218 TTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS-DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1056)
Q Consensus 218 ~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1056)
...+|+|.||||...|+..+ +.+ ........ +.. -...+..+.+..|||++.++.-......
T Consensus 83 ig~Ggfg~VYkG~l~~~~~v-----AVK-~~~~~~~~~~~e-F~~Ei~~ls~l~H~Nlv~LlGyC~e~~~---------- 145 (361)
T KOG1187|consen 83 IGEGGFGTVYKGVLSDGTVV-----AVK-RLSSNSGQGERE-FLNEVEILSRLRHPNLVKLLGYCLEGGE---------- 145 (361)
T ss_pred eecCCCeEEEEEEECCCCEE-----EEE-EecCCCCcchhH-HHHHHHHHhcCCCcCcccEEEEEecCCc----------
Confidence 34568999999999876322 111 11111111 111 2233567788889999976554332221
Q ss_pred cccccCCCcccccCCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHhhhcC---cccccCCCCCEEEccCCcEEEeC
Q 001548 297 ASCWIGGLRQGSSDHGVNLREWLNARGH-KGKRIECLYIFRQIVALVDYHHTQG---VTFLDLKPSSFKLLQSNQVKYIG 372 (1056)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~~-~~~~~~~~~i~~QIl~gL~ylHs~g---IvHrDLKP~NILl~~~~~vkl~D 372 (1056)
....+.||+..|+|.++|..... .+++...++|+.+++.||+|||... ||||||||+||||+.+...|++|
T Consensus 146 -----~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD 220 (361)
T KOG1187|consen 146 -----HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD 220 (361)
T ss_pred -----eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence 02458889999999999976654 7899999999999999999999865 99999999999999999999999
Q ss_pred cchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCC
Q 001548 373 PIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIP 452 (1056)
Q Consensus 373 fgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~ 452 (1056)
||+|+.....
T Consensus 221 FGLa~~~~~~---------------------------------------------------------------------- 230 (361)
T KOG1187|consen 221 FGLAKLGPEG---------------------------------------------------------------------- 230 (361)
T ss_pred ccCcccCCcc----------------------------------------------------------------------
Confidence 9999654310
Q ss_pred CCCCCcccccccCCCCCCCCCCCCcccccccccccccccc-ccCCCccCcccccCCCCCccchhHHHHHHHHHHhCCCCc
Q 001548 453 HSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQ-LEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDS 531 (1056)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~f~~ 531 (1056)
....... .||..|+|||.+..+..+.++|||||||+|.||+++-..
T Consensus 231 ---------------------------------~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~ 277 (361)
T KOG1187|consen 231 ---------------------------------DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKA 277 (361)
T ss_pred ---------------------------------ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcc
Confidence 0000022 799999999999988999999999999999999986211
Q ss_pred --------HHHHHHH-HHhhccC----CCCCCCC-CC------ChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001548 532 --------ERALAAA-MSDLRDR----ILPPSFL-SE------NPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 532 --------~~~~~~~-~~~~~~~----~lp~~~~-~~------~~~~~~li~~lL~~dP~~Rpt~~eil~~ 582 (1056)
......+ ...+..+ ++.|... .. -.++..+..+|++.+|..||++.|+++.
T Consensus 278 ~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~ 348 (361)
T KOG1187|consen 278 VDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKE 348 (361)
T ss_pred cCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHH
Confidence 1112222 1122221 1222222 12 2235688899999999999999998654
No 399
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.93 E-value=3.3e-25 Score=254.68 Aligned_cols=213 Identities=17% Similarity=0.262 Sum_probs=152.4
Q ss_pred hhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Q 001548 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~g 341 (1056)
....+.+.+||||+.+........... .....| ..+++.|++|.++++.. .+++..++.++.||+.|
T Consensus 66 Ei~~l~~l~h~~iv~~~~~~~~~~~~~-----~~~~~~------lv~~~~~~~L~~~~~~~--~l~~~~~~~i~~qi~~a 132 (345)
T cd07877 66 ELRLLKHMKHENVIGLLDVFTPARSLE-----EFNDVY------LVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRG 132 (345)
T ss_pred HHHHHHHcCCCcccceeeeeeeccccc-----ccccEE------EEehhcccCHHHHHhcC--CCCHHHHHHHHHHHHHH
Confidence 345678889999998665432111110 001112 34455689999988653 47777899999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|.|||++||+||||||+||+++.++.+|++|||+++.....
T Consensus 133 L~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~--------------------------------------- 173 (345)
T cd07877 133 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------------------------------------- 173 (345)
T ss_pred HHHHHHCCeeecCCChHHEEEcCCCCEEEeccccccccccc---------------------------------------
Confidence 99999999999999999999999999999999987653200
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
.....+|++|+||
T Consensus 174 -------------------------------------------------------------------~~~~~~~~~y~aP 186 (345)
T cd07877 174 -------------------------------------------------------------------MTGYVATRWYRAP 186 (345)
T ss_pred -------------------------------------------------------------------ccccccCCCccCH
Confidence 0134578889999
Q ss_pred ccccC-CCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhc--c----------------------CCCC-----
Q 001548 502 EELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLR--D----------------------RILP----- 548 (1056)
Q Consensus 502 E~l~~-~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~--~----------------------~~lp----- 548 (1056)
|.+.+ ..++.++|||||||++|||+++ |............++ . ...|
T Consensus 187 E~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (345)
T cd07877 187 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFA 266 (345)
T ss_pred HHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchh
Confidence 99876 5689999999999999999986 332211111100000 0 0001
Q ss_pred CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhhhch
Q 001548 549 PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCA 593 (1056)
Q Consensus 549 ~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~~~~ 593 (1056)
..+...++.+.+||.+||++||.+||++.++++||||.....+..
T Consensus 267 ~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~~~ 311 (345)
T cd07877 267 NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDD 311 (345)
T ss_pred hhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCCCc
Confidence 112245778899999999999999999999999999997655443
No 400
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.93 E-value=7.8e-24 Score=229.88 Aligned_cols=269 Identities=18% Similarity=0.244 Sum_probs=226.0
Q ss_pred CCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEe
Q 001548 745 TDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVE 824 (1056)
Q Consensus 745 ~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~ 824 (1056)
+..+++..|....++|....+...++ .||+..|+.+.|+|+...+++++.|..|+||.... ...+...
T Consensus 232 ~~ilTGG~d~~av~~d~~s~q~l~~~-----~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~-------~s~~~~~ 299 (506)
T KOG0289|consen 232 SKILTGGEDKTAVLFDKPSNQILATL-----KGHTKKITSVKFHKDLDTVITASADEIIRVWSVPL-------SSEPTSS 299 (506)
T ss_pred CcceecCCCCceEEEecchhhhhhhc-----cCcceEEEEEEeccchhheeecCCcceEEeecccc-------ccCcccc
Confidence 56789999988889998776655444 49999999999999999999999999999999874 3456667
Q ss_pred ecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEec--CCCcEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 001548 825 MSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIE--HEKRAWSVDFSQVHPTKLASGSDDCSVKLWNIN 902 (1056)
Q Consensus 825 ~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~--H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr 902 (1056)
..|..+|+.+..+|. +.+|++++.||++.+.|++++.++..... ..-.+++..||| ||.+|++|..|+.|+|||+.
T Consensus 300 ~~h~~~V~~ls~h~t-geYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHp-DgLifgtgt~d~~vkiwdlk 377 (506)
T KOG0289|consen 300 RPHEEPVTGLSLHPT-GEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHP-DGLIFGTGTPDGVVKIWDLK 377 (506)
T ss_pred ccccccceeeeeccC-CcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcC-CceEEeccCCCceEEEEEcC
Confidence 789999999999998 99999999999999999999998776653 223589999999 99999999999999999999
Q ss_pred CCceeEEEe-CCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEec-CCCCCeEEEEEc-CCCEEEEEECCCe
Q 001548 903 EKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLA-GHEKAVSYVKFL-DSGTLVTASTDNK 979 (1056)
Q Consensus 903 ~~~~~~~~~-~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~-gH~~~V~~l~fs-~~~~L~SgS~Dg~ 979 (1056)
++..+..|. |.++|..|+|+-+| ++||++++|+.|++||+|..+. +.++. .....|.++.|. .+.+|+.++.|=+
T Consensus 378 s~~~~a~Fpght~~vk~i~FsENG-Y~Lat~add~~V~lwDLRKl~n-~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~ 455 (506)
T KOG0289|consen 378 SQTNVAKFPGHTGPVKAISFSENG-YWLATAADDGSVKLWDLRKLKN-FKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQ 455 (506)
T ss_pred CccccccCCCCCCceeEEEeccCc-eEEEEEecCCeEEEEEehhhcc-cceeeccccccceeEEEcCCCCeEEeecceeE
Confidence 999888886 77899999999888 7999999999999999999875 34432 334579999998 6777888887777
Q ss_pred EEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeC
Q 001548 980 LKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRT 1046 (1056)
Q Consensus 980 IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v 1046 (1056)
|.+++-.+. ...++..+..|++...++. |+....+++++|.|...+++..
T Consensus 456 Vy~~~k~~k------~W~~~~~~~~~sg~st~v~-----------Fg~~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 456 VYICKKKTK------SWTEIKELADHSGLSTGVR-----------FGEHAQYLASTSMDAILRLYAL 505 (506)
T ss_pred EEEEecccc------cceeeehhhhcccccceee-----------ecccceEEeeccchhheEEeec
Confidence 777764422 4577888888987776666 7778889999999999888753
No 401
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.93 E-value=3.8e-25 Score=231.14 Aligned_cols=275 Identities=16% Similarity=0.250 Sum_probs=231.4
Q ss_pred CCCCc--EEEECCCeEEEEEccCceEEeEEEe---eeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcc
Q 001548 743 NPTDR--LGAFFDGLCKYARYSKFEVQGMLRT---GEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVD 817 (1056)
Q Consensus 743 ~~~~~--ls~s~D~~ikiw~~~~~~~~~~l~~---~~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~ 817 (1056)
+|++. +++|.||.+.+|+|.+++....++. ..|.-+..+|.|+.|+.|.+.+|+|+.||+|+||.+.+.
T Consensus 222 SPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG------ 295 (508)
T KOG0275|consen 222 SPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETG------ 295 (508)
T ss_pred CCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecc------
Confidence 55554 5889999999999999887776642 346678999999999999999999999999999999863
Q ss_pred cccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEE
Q 001548 818 VYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVK 897 (1056)
Q Consensus 818 ~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~ 897 (1056)
.........|...|+|+.|+.+ +..+++++.|.+|++.-+.+|++++.|++|.+.|+.+.|.+ +|..++++|.||+|+
T Consensus 296 ~ClRrFdrAHtkGvt~l~FSrD-~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~-dG~~iisaSsDgtvk 373 (508)
T KOG0275|consen 296 QCLRRFDRAHTKGVTCLSFSRD-NSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTD-DGHHIISASSDGTVK 373 (508)
T ss_pred hHHHHhhhhhccCeeEEEEccC-cchhhcccccceEEEeccccchhHHHhcCccccccceEEcC-CCCeEEEecCCccEE
Confidence 1222233478999999999998 88999999999999999999999999999999999999999 999999999999999
Q ss_pred EEECCCCceeEEEeC---CCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEec-CC---CCCeEEEEEcCCCE
Q 001548 898 LWNINEKNSLATIKN---IANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLA-GH---EKAVSYVKFLDSGT 970 (1056)
Q Consensus 898 IWDlr~~~~~~~~~~---~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~-gH---~~~V~~l~fs~~~~ 970 (1056)
+|+..+..|+.+|+. ..+|++|-.-|.++..++++...++|++.++...- +..|. |. ...|.++--..++.
T Consensus 374 vW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQv--VrsfsSGkREgGdFi~~~lSpkGew 451 (508)
T KOG0275|consen 374 VWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQV--VRSFSSGKREGGDFINAILSPKGEW 451 (508)
T ss_pred EecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccceE--EeeeccCCccCCceEEEEecCCCcE
Confidence 999999999999984 45799999999988889999999999999986532 34442 21 22344443336788
Q ss_pred EEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeC
Q 001548 971 LVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRT 1046 (1056)
Q Consensus 971 L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v 1046 (1056)
++..+.|+.+..+.+. +|..-+++.-|..-|+++. .+|...-+++-+.|+.+++|..
T Consensus 452 iYcigED~vlYCF~~~--------sG~LE~tl~VhEkdvIGl~-----------HHPHqNllAsYsEDgllKLWkp 508 (508)
T KOG0275|consen 452 IYCIGEDGVLYCFSVL--------SGKLERTLPVHEKDVIGLT-----------HHPHQNLLASYSEDGLLKLWKP 508 (508)
T ss_pred EEEEccCcEEEEEEee--------cCceeeeeecccccccccc-----------cCcccchhhhhcccchhhhcCC
Confidence 9999999999999998 6788899999999999998 5666666788899999999963
No 402
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.93 E-value=2.5e-25 Score=253.68 Aligned_cols=217 Identities=17% Similarity=0.190 Sum_probs=156.5
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....|||++.+......... .++.....+|+++. ++|.+++...+ .+++..++.++.||+.||
T Consensus 50 ~~~l~~l~~~~i~~~~~~~~~~~~-----------~~~~~~~lv~e~~~-~~l~~~l~~~~-~l~~~~~~~i~~~l~~~l 116 (330)
T cd07834 50 IKLLRHLRHENIIGLLDILRPPSP-----------EDFNDVYIVTELME-TDLHKVIKSPQ-PLTDDHIQYFLYQILRGL 116 (330)
T ss_pred HHHHHhcCCcchhhhhhhhcccCc-----------ccccceEEEecchh-hhHHHHHhCCC-CCCHHHHHHHHHHHHHHH
Confidence 445677789998876655332111 11112234777777 48999997655 677879999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+|+||||+||+++.++.++++|||++........
T Consensus 117 ~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~-------------------------------------- 158 (330)
T cd07834 117 KYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDED-------------------------------------- 158 (330)
T ss_pred HHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccccc--------------------------------------
Confidence 999999999999999999999999999999998876541100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.........+|++|+|||
T Consensus 159 --------------------------------------------------------------~~~~~~~~~~~~~y~aPE 176 (330)
T cd07834 159 --------------------------------------------------------------EKGFLTEYVVTRWYRAPE 176 (330)
T ss_pred --------------------------------------------------------------ccccccccccccCcCCce
Confidence 000112456889999999
Q ss_pred cccCC-CCCccchhHHHHHHHHHHhCCCC---cHHHHHHHHHhhc--cC---------------------------CCCC
Q 001548 503 ELSGG-VCTTSSNIYSLGVLFFELFGRFD---SERALAAAMSDLR--DR---------------------------ILPP 549 (1056)
Q Consensus 503 ~l~~~-~~t~~sDIwSLGvlL~eLlt~f~---~~~~~~~~~~~~~--~~---------------------------~lp~ 549 (1056)
.+.+. .++.++|||||||++|+|+++.. +............ .. .+..
T Consensus 177 ~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (330)
T cd07834 177 LLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSK 256 (330)
T ss_pred eeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHH
Confidence 99987 78999999999999999998733 2221111111000 00 0001
Q ss_pred CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhhhc
Q 001548 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (1056)
Q Consensus 550 ~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~~~ 592 (1056)
.....++.+.+|+.+||+++|.+||++.++++||||.......
T Consensus 257 ~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~ 299 (330)
T cd07834 257 LFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPE 299 (330)
T ss_pred hcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcccc
Confidence 1234577889999999999999999999999999999876654
No 403
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.93 E-value=3.6e-25 Score=247.30 Aligned_cols=207 Identities=20% Similarity=0.186 Sum_probs=151.2
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIV 339 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~QIl 339 (1056)
...+....||||+.+......... . .. ..+|+|++|++|.+++.. ....++...+..++.||+
T Consensus 50 ~~~l~~l~h~~iv~~~~~~~~~~~-~--------~~-----~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~ 115 (287)
T cd06621 50 LEINKSCKSPYIVKYYGAFLDESS-S--------SI-----GIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVL 115 (287)
T ss_pred HHHHHhCCCCCeeeeeeEEEccCC-C--------eE-----EEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 456777899999875543221110 0 01 137999999999998753 344567778999999999
Q ss_pred HHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccc
Q 001548 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (1056)
Q Consensus 340 ~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 419 (1056)
.||.|||+.||+|+||+|+||+++.++.++++|||++.......
T Consensus 116 ~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~------------------------------------ 159 (287)
T cd06621 116 KGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL------------------------------------ 159 (287)
T ss_pred HHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccccc------------------------------------
Confidence 99999999999999999999999999999999999875533100
Q ss_pred cccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCcc
Q 001548 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (1056)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 499 (1056)
.....++..|+
T Consensus 160 ---------------------------------------------------------------------~~~~~~~~~y~ 170 (287)
T cd06621 160 ---------------------------------------------------------------------AGTFTGTSFYM 170 (287)
T ss_pred ---------------------------------------------------------------------cccccCCcccc
Confidence 00234567799
Q ss_pred CcccccCCCCCccchhHHHHHHHHHHhCCCCcHH-------HHHHHHHhhcc---CCCCCCC---CCCChhHHHHHHhcc
Q 001548 500 SPEELSGGVCTTSSNIYSLGVLFFELFGRFDSER-------ALAAAMSDLRD---RILPPSF---LSENPKEAGFCLWQL 566 (1056)
Q Consensus 500 APE~l~~~~~t~~sDIwSLGvlL~eLlt~f~~~~-------~~~~~~~~~~~---~~lp~~~---~~~~~~~~~li~~lL 566 (1056)
|||.+.+..++.++|||||||++|+|++|..++. ........+.. ..++... ...++.+.+|+.+||
T Consensus 171 ~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 250 (287)
T cd06621 171 APERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCL 250 (287)
T ss_pred CHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHc
Confidence 9999999899999999999999999998732211 11112222222 1111111 123467889999999
Q ss_pred ccCCCCCCCHHHHhhhhhhhhh
Q 001548 567 HPEPLSRPTTREILQSEVTNEF 588 (1056)
Q Consensus 567 ~~dP~~Rpt~~eil~~~~~~~~ 588 (1056)
+++|++|||+.|++.||||...
T Consensus 251 ~~~p~~Rpt~~eil~~~~~~~~ 272 (287)
T cd06621 251 EKDPTRRPTPWDMLEHPWIKAQ 272 (287)
T ss_pred CCCcccCCCHHHHHhCcccccc
Confidence 9999999999999999999553
No 404
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.93 E-value=1.9e-25 Score=256.41 Aligned_cols=211 Identities=18% Similarity=0.239 Sum_probs=151.7
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...++...|||++.+......+.... .. ..-..+++++ |++|.+++... .+++..++.++.||+.||
T Consensus 65 ~~~l~~l~h~~iv~~~~~~~~~~~~~----~~------~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~ql~~aL 131 (343)
T cd07851 65 LRLLKHMDHENVIGLLDVFTPASSLE----DF------QDVYLVTHLM-GADLNNIVKCQ--KLSDDHIQFLVYQILRGL 131 (343)
T ss_pred HHHHHhccCCCHHHHHHHhhcccccc----cc------ccEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHH
Confidence 45677778999987654422211110 00 0011355555 77999999753 578889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 132 ~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~---------------------------------------- 171 (343)
T cd07851 132 KYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE---------------------------------------- 171 (343)
T ss_pred HHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccccc----------------------------------------
Confidence 9999999999999999999999999999999988654310
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.....+|.+|+|||
T Consensus 172 ------------------------------------------------------------------~~~~~~~~~y~aPE 185 (343)
T cd07851 172 ------------------------------------------------------------------MTGYVATRWYRAPE 185 (343)
T ss_pred ------------------------------------------------------------------ccCCcccccccCHH
Confidence 01345778899999
Q ss_pred cccC-CCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccC-----------------------------CCCC
Q 001548 503 ELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDR-----------------------------ILPP 549 (1056)
Q Consensus 503 ~l~~-~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~-----------------------------~lp~ 549 (1056)
.+.+ ..++.++|||||||++|||++| |............+... .++.
T Consensus 186 ~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (343)
T cd07851 186 IMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKE 265 (343)
T ss_pred HHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHH
Confidence 9876 4678999999999999999987 33222221111111100 0011
Q ss_pred CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhhhc
Q 001548 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (1056)
Q Consensus 550 ~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~~~ 592 (1056)
.+...++++.+|+.+||++||.+|||+.+|++||||.......
T Consensus 266 ~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~~ 308 (343)
T cd07851 266 VFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDPE 308 (343)
T ss_pred HhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCCc
Confidence 1234578899999999999999999999999999998765443
No 405
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.93 E-value=2.6e-25 Score=242.35 Aligned_cols=207 Identities=19% Similarity=0.148 Sum_probs=157.3
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...++...|||++.+......... .. ...++++++|++|.+++.... .+++..+..++.|++.||
T Consensus 50 ~~~l~~l~~~~i~~~~~~~~~~~~-------~~-------~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l 114 (260)
T cd06606 50 IRILSSLQHPNIVRYYGSERDEEK-------NT-------LNIFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGL 114 (260)
T ss_pred HHHHHHcCCCCEeeEEEEEecCCC-------Ce-------EEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHH
Confidence 456777789999876655443210 00 124789999999999997765 677779999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||+.|++|+||+|+||+++.++.+||+|||.+.........
T Consensus 115 ~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~------------------------------------- 157 (260)
T cd06606 115 AYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG------------------------------------- 157 (260)
T ss_pred HHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc-------------------------------------
Confidence 9999999999999999999999999999999988665411000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......++..|+|||
T Consensus 158 ----------------------------------------------------------------~~~~~~~~~~~y~~pE 173 (260)
T cd06606 158 ----------------------------------------------------------------EGTGSVRGTPYWMAPE 173 (260)
T ss_pred ----------------------------------------------------------------ccccCCCCCccccCHh
Confidence 0001345677899999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhcc-CCCCCCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRD-RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~-~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~e 578 (1056)
.+.+..++.++|||||||++|+|++| |.........+..+.. ...+......++.+.+|+.+||.++|.+||++.+
T Consensus 174 ~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ 253 (260)
T cd06606 174 VIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADE 253 (260)
T ss_pred hhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHH
Confidence 99988899999999999999999986 3333222222223322 3333334455788999999999999999999999
Q ss_pred Hhhhhhh
Q 001548 579 ILQSEVT 585 (1056)
Q Consensus 579 il~~~~~ 585 (1056)
+++||||
T Consensus 254 ll~~~~~ 260 (260)
T cd06606 254 LLQHPFL 260 (260)
T ss_pred HhhCCCC
Confidence 9999997
No 406
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.93 E-value=2.8e-25 Score=254.95 Aligned_cols=210 Identities=17% Similarity=0.245 Sum_probs=150.5
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..+++...||||+.+........... .. .....+++++. .+|..++. ..++...+..++.||+.||
T Consensus 65 ~~~l~~l~h~niv~~~~~~~~~~~~~-----~~-----~~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~~~~qi~~aL 130 (342)
T cd07879 65 LTLLKHMQHENVIGLLDVFTSAVSGD-----EF-----QDFYLVMPYMQ-TDLQKIMG---HPLSEDKVQYLVYQMLCGL 130 (342)
T ss_pred HHHHHhcCCCCccchhheecccccCC-----CC-----ceEEEEecccc-cCHHHHHc---CCCCHHHHHHHHHHHHHHH
Confidence 45677889999997665533221111 00 01123566665 47877652 3467778999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+||+++.++.+|++|||+++.....
T Consensus 131 ~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~---------------------------------------- 170 (342)
T cd07879 131 KYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAE---------------------------------------- 170 (342)
T ss_pred HHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC----------------------------------------
Confidence 9999999999999999999999999999999987543200
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.....+|++|+|||
T Consensus 171 ------------------------------------------------------------------~~~~~~~~~y~aPE 184 (342)
T cd07879 171 ------------------------------------------------------------------MTGYVVTRWYRAPE 184 (342)
T ss_pred ------------------------------------------------------------------CCCceeeecccChh
Confidence 01345788899999
Q ss_pred cccC-CCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhcc------------------------CCCC-----C
Q 001548 503 ELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRD------------------------RILP-----P 549 (1056)
Q Consensus 503 ~l~~-~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~------------------------~~lp-----~ 549 (1056)
.+.+ ..++.++|||||||++|||++| |............+.. ...+ .
T Consensus 185 ~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (342)
T cd07879 185 VILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFST 264 (342)
T ss_pred hhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHH
Confidence 9876 4689999999999999999986 4332221111111100 0001 1
Q ss_pred CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhhhc
Q 001548 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (1056)
Q Consensus 550 ~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~~~ 592 (1056)
.++..++.+.+|+.+||++||.+||++.+++.||||...+...
T Consensus 265 ~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~~ 307 (342)
T cd07879 265 LFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDAD 307 (342)
T ss_pred HhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccccc
Confidence 1234677889999999999999999999999999999876543
No 407
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.93 E-value=1.4e-25 Score=253.56 Aligned_cols=208 Identities=17% Similarity=0.161 Sum_probs=146.1
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC----CCCCHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG----HKGKRIECLYIFRQI 338 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~----~~~~~~~~~~i~~QI 338 (1056)
..++....|||++.+.......... . ...+||++++ +|.+++.... ..+++..++.++.||
T Consensus 53 ~~~l~~l~h~~i~~~~~~~~~~~~~---------~-----~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi 117 (316)
T cd07842 53 IALLRELKHENVVSLVEVFLEHADK---------S-----VYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQI 117 (316)
T ss_pred HHHHHhcCCCCccceEEEEeCCCCc---------e-----EEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHH
Confidence 3467778899999876654322000 0 1137778775 7777774322 256777899999999
Q ss_pred HHHHHHhhhcCcccccCCCCCEEEcc----CCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccc
Q 001548 339 VALVDYHHTQGVTFLDLKPSSFKLLQ----SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (1056)
Q Consensus 339 l~gL~ylHs~gIvHrDLKP~NILl~~----~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 414 (1056)
+.||.|||++||+||||||+||+++. ++.+|++|||+++........
T Consensus 118 ~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~----------------------------- 168 (316)
T cd07842 118 LNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKP----------------------------- 168 (316)
T ss_pred HHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCccc-----------------------------
Confidence 99999999999999999999999999 899999999988765411000
Q ss_pred ccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCcccccccccccccccccc
Q 001548 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (1056)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 494 (1056)
........+
T Consensus 169 -----------------------------------------------------------------------~~~~~~~~~ 177 (316)
T cd07842 169 -----------------------------------------------------------------------LADLDPVVV 177 (316)
T ss_pred -----------------------------------------------------------------------ccccCCccc
Confidence 000013567
Q ss_pred CCCccCcccccC-CCCCccchhHHHHHHHHHHhCCCCcH---HH------------HHHHHHhhc---------------
Q 001548 495 EKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSE---RA------------LAAAMSDLR--------------- 543 (1056)
Q Consensus 495 t~~Y~APE~l~~-~~~t~~sDIwSLGvlL~eLlt~f~~~---~~------------~~~~~~~~~--------------- 543 (1056)
|.+|+|||++.+ ..++.++|||||||+||+|+++..++ .. .......+.
T Consensus 178 ~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 257 (316)
T cd07842 178 TIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPE 257 (316)
T ss_pred cccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhccc
Confidence 889999999877 45799999999999999999862221 10 011111000
Q ss_pred ---------cCCCCC--------CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 544 ---------DRILPP--------SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 544 ---------~~~lp~--------~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
....+. .....++.+.+++.+||++||++|||+.|+++||||
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 258 YDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred chhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 000000 011456678899999999999999999999999998
No 408
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93 E-value=3.5e-25 Score=253.24 Aligned_cols=203 Identities=18% Similarity=0.174 Sum_probs=149.6
Q ss_pred hhhhccC-CCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC---------------CCC
Q 001548 263 AMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------------HKG 326 (1056)
Q Consensus 263 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~---------------~~~ 326 (1056)
..++... .||||+.+......+... ...++|+.+++|.++|.... ..+
T Consensus 68 ~~~l~~l~~h~~iv~~~~~~~~~~~~----------------~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l 131 (334)
T cd05100 68 MEMMKMIGKHKNIINLLGACTQDGPL----------------YVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQL 131 (334)
T ss_pred HHHHHhhcCCCCeeeeeEEEccCCce----------------EEEEecCCCCcHHHHHHhcCCcccccccccccCccccC
Confidence 3455555 799999766553221111 13789999999999997542 235
Q ss_pred CHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccc
Q 001548 327 KRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFT 406 (1056)
Q Consensus 327 ~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (1056)
....++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 132 ~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~--------------------- 190 (334)
T cd05100 132 TFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYY--------------------- 190 (334)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCcccceeccccccc---------------------
Confidence 66678899999999999999999999999999999999999999999998764410000
Q ss_pred ccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCcccccccccc
Q 001548 407 TGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQS 486 (1056)
Q Consensus 407 ~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (1056)
T Consensus 191 -------------------------------------------------------------------------------- 190 (334)
T cd05100 191 -------------------------------------------------------------------------------- 190 (334)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHH
Q 001548 487 TSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFC 562 (1056)
Q Consensus 487 ~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li 562 (1056)
.......++..|+|||++.+..++.++|||||||+||||++ + |... ........+.....++.....+..+.+|+
T Consensus 191 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li 269 (334)
T cd05100 191 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDKPANCTHELYMIM 269 (334)
T ss_pred ccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCC-CHHHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence 00001223456999999999899999999999999999997 4 3222 22223333333333344456678899999
Q ss_pred HhccccCCCCCCCHHHHhhhh
Q 001548 563 LWQLHPEPLSRPTTREILQSE 583 (1056)
Q Consensus 563 ~~lL~~dP~~Rpt~~eil~~~ 583 (1056)
.+||+++|.+||++.+++.+.
T Consensus 270 ~~cl~~~p~~Rps~~ell~~l 290 (334)
T cd05100 270 RECWHAVPSQRPTFKQLVEDL 290 (334)
T ss_pred HHHcccChhhCcCHHHHHHHH
Confidence 999999999999999999864
No 409
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.93 E-value=4.3e-25 Score=243.36 Aligned_cols=207 Identities=16% Similarity=0.086 Sum_probs=154.2
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+...+|||++.+.......... . -..++++++|++|.+++...+. ++...++.++.||+.||
T Consensus 55 i~~l~~l~h~~i~~~~~~~~~~~~~-------~-------~~~v~e~~~~~~L~~~~~~~~~-l~~~~~~~~~~~i~~al 119 (264)
T cd06653 55 IQLLKNLRHDRIVQYYGCLRDPEEK-------K-------LSIFVEYMPGGSIKDQLKAYGA-LTENVTRRYTRQILQGV 119 (264)
T ss_pred HHHHHHcCCCCcceEEEEEEcCCCC-------E-------EEEEEEeCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHH
Confidence 4567778999998765542211000 0 1137889999999999976554 56768999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+|+||||+||+++.++.++++|||+++.......
T Consensus 120 ~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-------------------------------------- 161 (264)
T cd06653 120 SYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM-------------------------------------- 161 (264)
T ss_pred HHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccc--------------------------------------
Confidence 999999999999999999999999999999998876431000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.....+...++..|+|||
T Consensus 162 --------------------------------------------------------------~~~~~~~~~~~~~y~aPE 179 (264)
T cd06653 162 --------------------------------------------------------------SGTGIKSVTGTPYWMSPE 179 (264)
T ss_pred --------------------------------------------------------------cCccccccCCcccccCHh
Confidence 000011345788899999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCCCCc---HHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGRFDS---ERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~f~~---~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~ei 579 (1056)
.+.+..++.++|+|||||++|+|++|..+ ................+......++.+.+|+..||. +|..||++.++
T Consensus 180 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~ 258 (264)
T cd06653 180 VISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFL 258 (264)
T ss_pred hhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHH
Confidence 99988899999999999999999987333 233333333333332333344567889999999999 57999999999
Q ss_pred hhhhhh
Q 001548 580 LQSEVT 585 (1056)
Q Consensus 580 l~~~~~ 585 (1056)
+.|||.
T Consensus 259 ~~~~~~ 264 (264)
T cd06653 259 LRHPFV 264 (264)
T ss_pred hcCCCC
Confidence 999984
No 410
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.93 E-value=8.9e-25 Score=228.41 Aligned_cols=256 Identities=17% Similarity=0.261 Sum_probs=215.3
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCC-CCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEE
Q 001548 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALF-NDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKL 855 (1056)
Q Consensus 777 ~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~-~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~l 855 (1056)
+..+.+.|..|+|||++|++|+.||.|.|||+.+.- ...........++-+...|.|++|+.+ ..+||+|+.||.|++
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRD-sEMlAsGsqDGkIKv 289 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRD-SEMLASGSQDGKIKV 289 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeeccc-HHHhhccCcCCcEEE
Confidence 567788999999999999999999999999997632 222233344566778999999999998 899999999999999
Q ss_pred EEcCCCceEEEEe-cCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEEEe
Q 001548 856 WDACTGQTVSHYI-EHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGS 933 (1056)
Q Consensus 856 WD~~t~~~v~~~~-~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~lasGs 933 (1056)
|.+.+|+|++.|. .|...|+|+.|+. |+..++++|.|.+++|--+.+|++++.+. |.+-|+.+.|.++|. .++++|
T Consensus 290 Wri~tG~ClRrFdrAHtkGvt~l~FSr-D~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~-~iisaS 367 (508)
T KOG0275|consen 290 WRIETGQCLRRFDRAHTKGVTCLSFSR-DNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGH-HIISAS 367 (508)
T ss_pred EEEecchHHHHhhhhhccCeeEEEEcc-CcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCC-eEEEec
Confidence 9999999999997 8999999999999 88899999999999999999999999997 567799999999996 888999
Q ss_pred CCCeEEEEEcCCCCcceEEec--CCCCCeEEEEEc--CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcE
Q 001548 934 ADYRTYCYDLRNARAPWCVLA--GHEKAVSYVKFL--DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEK 1009 (1056)
Q Consensus 934 ~Dg~V~lwDlr~~~~~~~~l~--gH~~~V~~l~fs--~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~V 1009 (1056)
.||+|++|+..+.++ +.+|+ +..-+|.++-.. +...++.|-..++|.|-++. |..+++|..-.
T Consensus 368 sDgtvkvW~~KtteC-~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q---------GQvVrsfsSGk--- 434 (508)
T KOG0275|consen 368 SDGTVKVWHGKTTEC-LSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ---------GQVVRSFSSGK--- 434 (508)
T ss_pred CCccEEEecCcchhh-hhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEecc---------ceEEeeeccCC---
Confidence 999999999998876 45553 345578887765 45679999999999999986 45666665322
Q ss_pred EEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCCeEEE
Q 001548 1010 VGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWGCLLL 1053 (1056)
Q Consensus 1010 v~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~~~~~ 1053 (1056)
-+++.+...+.||.|.|+.+.+.|+.+..+.+.+|.+--
T Consensus 435 -----REgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE~ 473 (508)
T KOG0275|consen 435 -----REGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLER 473 (508)
T ss_pred -----ccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCceee
Confidence 233444556689999999999999999999999987653
No 411
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.93 E-value=1e-22 Score=204.12 Aligned_cols=289 Identities=20% Similarity=0.209 Sum_probs=220.0
Q ss_pred ceeeecccccCCCCcE--EEECCCeEEEEEccCceE----------EeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCC
Q 001548 733 FLAQQDQEIQNPTDRL--GAFFDGLCKYARYSKFEV----------QGMLRTGEFNNSANVICSISFDRDEDHFAAAGVS 800 (1056)
Q Consensus 733 v~~~~~~~~~~~~~~l--s~s~D~~ikiw~~~~~~~----------~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~D 800 (1056)
|.+++| .|.+.| .++-..+.++..|...-- ........-.+|.+.|.|++|+|+|+++|||+.|
T Consensus 35 irav~f----hp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsnd 110 (350)
T KOG0641|consen 35 IRAVAF----HPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSND 110 (350)
T ss_pred eeeEEe----cCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCCC
Confidence 445555 456655 556677788776642210 0011111345899999999999999999999999
Q ss_pred CcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCC---CCEEEEEE-CCCcEEEEEcCCCceEEEEecCCCcEEE
Q 001548 801 KKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI---KNYLASAD-YDGVVKLWDACTGQTVSHYIEHEKRAWS 876 (1056)
Q Consensus 801 g~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~---~~~LaSgs-~Dg~V~lWD~~t~~~v~~~~~H~~~V~s 876 (1056)
++|++.-++....... -....+..|.+.|.+++|-.+. +.+|++++ .|-.|.+=|-.+|+.+..+.+|++-|.+
T Consensus 111 k~ik~l~fn~dt~~~~--g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtghila 188 (350)
T KOG0641|consen 111 KTIKVLPFNADTCNAT--GHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGHILA 188 (350)
T ss_pred ceEEEEeccccccccc--CcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCcccEEE
Confidence 9999998874221111 1112334589999999995432 45666654 3445555577889999999999999998
Q ss_pred EEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEe---C-----CCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCc
Q 001548 877 VDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK---N-----IANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARA 948 (1056)
Q Consensus 877 v~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~---~-----~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~ 948 (1056)
+- +. ++.+|++||.|.+|+.||+|-..++.++. + .+.|.+|+..|.|. +|++|..|..+.+||+|.++.
T Consensus 189 ly-sw-n~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgr-ll~sg~~dssc~lydirg~r~ 265 (350)
T KOG0641|consen 189 LY-SW-NGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGR-LLASGHADSSCMLYDIRGGRM 265 (350)
T ss_pred EE-Ee-cCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcc-eeeeccCCCceEEEEeeCCce
Confidence 83 32 67899999999999999999999988875 1 25699999999996 999999999999999998875
Q ss_pred ceEEecCCCCCeEEEEEcCCC-EEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeC
Q 001548 949 PWCVLAGHEKAVSYVKFLDSG-TLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNL 1027 (1056)
Q Consensus 949 ~~~~l~gH~~~V~~l~fs~~~-~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~ 1027 (1056)
+..+..|...|.+|.|+|+. ++++||.|..|++-|+...-. ....+.....|.+.++-+. |+|
T Consensus 266 -iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla----~el~~~vv~ehkdk~i~~r-----------wh~ 329 (350)
T KOG0641|consen 266 -IQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLA----HELPIMVVAEHKDKAIQCR-----------WHP 329 (350)
T ss_pred -eeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchh----hcCceEEEEeccCceEEEE-----------ecC
Confidence 78899999999999999765 599999999999999973321 1123445566777776666 999
Q ss_pred CCCEEEEEEcCCcEEEEeC
Q 001548 1028 SDCWLLLVCFDFTTLSFRT 1046 (1056)
Q Consensus 1028 ~g~~l~s~s~D~~v~iW~v 1046 (1056)
.+--+++.+.|.++.+|-.
T Consensus 330 ~d~sfisssadkt~tlwa~ 348 (350)
T KOG0641|consen 330 QDFSFISSSADKTATLWAL 348 (350)
T ss_pred ccceeeeccCcceEEEecc
Confidence 9999999999999999975
No 412
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.92 E-value=1.7e-23 Score=219.71 Aligned_cols=245 Identities=16% Similarity=0.225 Sum_probs=206.0
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCC-CCEEEEEECCCc
Q 001548 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI-KNYLASADYDGV 852 (1056)
Q Consensus 774 ~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~-~~~LaSgs~Dg~ 852 (1056)
.+..|...|++++.+ +.++|+||.|-+|+|||+.+ ....-....|.+.|+++.|.++. .+.|++|+.||.
T Consensus 38 ~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k-------~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~ 108 (362)
T KOG0294|consen 38 AFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRK-------RKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGH 108 (362)
T ss_pred cccccccceeEEEec--ceeEeccCCCCcEEEEeccc-------hhhhcceeccccceEEEEecCCcchhheeeecCCCc
Confidence 466899999999996 99999999999999999975 12233445789999999998762 348999999999
Q ss_pred EEEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEeCCCCeEEEEEccCCCcEEEEE
Q 001548 853 VKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFG 932 (1056)
Q Consensus 853 V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~~~~~V~sv~fsp~~~~~lasG 932 (1056)
|.+|+...-.++.++++|.+.|+.++.+| .+.+-++.+.|+.+++|++-+|+......-....+.|.|+|.|.+ ++.+
T Consensus 109 i~iw~~~~W~~~~slK~H~~~Vt~lsiHP-S~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~-F~v~ 186 (362)
T KOG0294|consen 109 IIIWRVGSWELLKSLKAHKGQVTDLSIHP-SGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQGDH-FVVS 186 (362)
T ss_pred EEEEEcCCeEEeeeecccccccceeEecC-CCceEEEEcCCceeeeehhhcCccceeeccCCcceeeEEcCCCCE-EEEE
Confidence 99999999999999999999999999999 899999999999999999999987666665555566999999984 4444
Q ss_pred eCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEE
Q 001548 933 SADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGI 1012 (1056)
Q Consensus 933 s~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~l 1012 (1056)
+. ..|-+|-+.+... ... ......+.++.|.+++.|++|..|+.|++||.. ...+...|.+|.++|-++
T Consensus 187 ~~-~~i~i~q~d~A~v-~~~-i~~~~r~l~~~~l~~~~L~vG~d~~~i~~~D~d--------s~~~~~~~~AH~~RVK~i 255 (362)
T KOG0294|consen 187 GR-NKIDIYQLDNASV-FRE-IENPKRILCATFLDGSELLVGGDNEWISLKDTD--------SDTPLTEFLAHENRVKDI 255 (362)
T ss_pred ec-cEEEEEecccHhH-hhh-hhccccceeeeecCCceEEEecCCceEEEeccC--------CCccceeeecchhheeee
Confidence 44 4588998877553 111 222356999999999999999999999999998 457889999999999888
Q ss_pred EecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCC
Q 001548 1013 CRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWG 1049 (1056)
Q Consensus 1013 s~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~ 1049 (1056)
.+ +..|.+.+|+|+|.||.|++||++|.
T Consensus 256 ~~---------~~~~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 256 AS---------YTNPEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred EE---------EecCCceEEEEeccCceEEEEEcccc
Confidence 73 35677889999999999999999998
No 413
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.92 E-value=2.7e-25 Score=244.24 Aligned_cols=235 Identities=15% Similarity=0.114 Sum_probs=163.9
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCccc
Q 001548 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1056)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1056)
.+|.|.||++...++..+ ..+.........+ .. .....+++...|||++.+......+ .
T Consensus 16 ~G~~g~v~~~~~~~~~~~-----a~K~~~~~~~~~~-~~-~~E~~~l~~l~h~~i~~~~~~~~~~----------~---- 74 (260)
T cd05067 16 AGQFGEVWMGYYNGHTKV-----AIKSLKQGSMSPE-AF-LAEANLMKQLQHPRLVRLYAVVTQE----------P---- 74 (260)
T ss_pred cCccceEEeeecCCCceE-----EEEEecCCCCcHH-HH-HHHHHHHHhcCCcCeeeEEEEEccC----------C----
Confidence 357899999987544333 1111111111111 11 1224567778899988765432110 0
Q ss_pred ccCCCcccccCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhc
Q 001548 300 WIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1056)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~ 378 (1056)
-..+|+++.|++|.+++... +..++...++.++.||+.||+|||+.||+||||||+||+++.++.++++|||+++.
T Consensus 75 ---~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 151 (260)
T cd05067 75 ---IYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARL 151 (260)
T ss_pred ---cEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceee
Confidence 12489999999999998653 44677778999999999999999999999999999999999999999999998865
Q ss_pred ccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCc
Q 001548 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1056)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~ 458 (1056)
.......
T Consensus 152 ~~~~~~~------------------------------------------------------------------------- 158 (260)
T cd05067 152 IEDNEYT------------------------------------------------------------------------- 158 (260)
T ss_pred cCCCCcc-------------------------------------------------------------------------
Confidence 4310000
Q ss_pred ccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHH
Q 001548 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERA 534 (1056)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~ 534 (1056)
......++..|+|||.+.+..++.++|||||||++|||++ + |.....
T Consensus 159 -----------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~ 209 (260)
T cd05067 159 -----------------------------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN 209 (260)
T ss_pred -----------------------------cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh
Confidence 0002234567999999998889999999999999999997 5 332222
Q ss_pred HHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001548 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1056)
Q Consensus 535 ~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~ 581 (1056)
......+.....++.....+..+.+|+.+||.++|.+||++.+++.
T Consensus 210 -~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 210 -PEVIQNLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred -HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 1222222233233344456678999999999999999999999876
No 414
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.92 E-value=5e-25 Score=249.04 Aligned_cols=204 Identities=14% Similarity=0.103 Sum_probs=152.9
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..+++...|||++.+......... ...+++|+. ++|.+++......++...+..++.||+.||
T Consensus 66 ~~~l~~l~h~~i~~~~~~~~~~~~----------------~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l 128 (308)
T cd06634 66 VRFLQKLRHPNTIQYRGCYLREHT----------------AWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGL 128 (308)
T ss_pred HHHHHhCCCCCcccEEEEEEcCCe----------------eEEEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence 456777889999876655332111 123788886 588888866666678889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+||+++.++.+|++|||++.....
T Consensus 129 ~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~----------------------------------------- 167 (308)
T cd06634 129 AYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP----------------------------------------- 167 (308)
T ss_pred HHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecC-----------------------------------------
Confidence 999999999999999999999999999999998754320
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.....++..|+|||
T Consensus 168 ------------------------------------------------------------------~~~~~~~~~y~aPE 181 (308)
T cd06634 168 ------------------------------------------------------------------ANXFVGTPYWMAPE 181 (308)
T ss_pred ------------------------------------------------------------------cccccCCccccCHH
Confidence 00235677899999
Q ss_pred ccc---CCCCCccchhHHHHHHHHHHhCCCCc---HHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCH
Q 001548 503 ELS---GGVCTTSSNIYSLGVLFFELFGRFDS---ERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT 576 (1056)
Q Consensus 503 ~l~---~~~~t~~sDIwSLGvlL~eLlt~f~~---~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~ 576 (1056)
.+. ...++.++|||||||++|+|+++..+ .......................+..+.+||.+||.++|.+||++
T Consensus 182 ~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~ 261 (308)
T cd06634 182 VILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTS 261 (308)
T ss_pred HHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCH
Confidence 975 35678999999999999999987433 222222222222222222233556778999999999999999999
Q ss_pred HHHhhhhhhhhhhh
Q 001548 577 REILQSEVTNEFQE 590 (1056)
Q Consensus 577 ~eil~~~~~~~~~~ 590 (1056)
.+++.|||+.....
T Consensus 262 ~~ll~~~~~~~~~~ 275 (308)
T cd06634 262 EVLLKHRFVLRERP 275 (308)
T ss_pred HHHhhCccccccCC
Confidence 99999999987533
No 415
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.92 E-value=5.3e-25 Score=248.13 Aligned_cols=222 Identities=16% Similarity=0.177 Sum_probs=151.4
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....||||+.+........... ..... .. ..+|+|+. ++|..++......+++..++.++.||++||
T Consensus 58 ~~~l~~l~h~~i~~~~~~~~~~~~~~-~~~~~--~~-----~lv~~~~~-~~l~~~~~~~~~~~~~~~~~~i~~~l~~al 128 (311)
T cd07866 58 IKILKKLKHPNVVPLIDMAVERPDKS-KRKRG--SV-----YMVTPYMD-HDLSGLLENPSVKLTESQIKCYMLQLLEGI 128 (311)
T ss_pred HHHHHhcCCCCccchhhheecccccc-cccCc--eE-----EEEEecCC-cCHHHHHhccccCCCHHHHHHHHHHHHHHH
Confidence 45677889999998665433211110 00000 11 13566665 478888776666788889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
+|||++||+|+||||+||+++.++.+|++|||+++..........
T Consensus 129 ~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~----------------------------------- 173 (311)
T cd07866 129 NYLHENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPK----------------------------------- 173 (311)
T ss_pred HHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhccCCCcccc-----------------------------------
Confidence 999999999999999999999999999999999876542100000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
. . ........+...++++|+|||
T Consensus 174 ---------------------------------~----~--------------------~~~~~~~~~~~~~~~~y~aPE 196 (311)
T cd07866 174 ---------------------------------G----G--------------------GGGGTRKYTNLVVTRWYRPPE 196 (311)
T ss_pred ---------------------------------c----C--------------------CcccccccccceeccCcCChH
Confidence 0 0 000011223567899999999
Q ss_pred cccCC-CCCccchhHHHHHHHHHHhCCCCcH---HHHHH---HHHhhccC---------------------CCC----CC
Q 001548 503 ELSGG-VCTTSSNIYSLGVLFFELFGRFDSE---RALAA---AMSDLRDR---------------------ILP----PS 550 (1056)
Q Consensus 503 ~l~~~-~~t~~sDIwSLGvlL~eLlt~f~~~---~~~~~---~~~~~~~~---------------------~lp----~~ 550 (1056)
.+.+. .++.++|||||||++|||++|..++ ..... ........ ..+ ..
T Consensus 197 ~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (311)
T cd07866 197 LLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEER 276 (311)
T ss_pred HhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHH
Confidence 88764 5799999999999999999874332 11111 11110000 000 11
Q ss_pred CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 551 FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 551 ~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
+....+.+.+|+.+||..||.+|||+.+++.||||
T Consensus 277 ~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 277 FGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred cccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 23445678899999999999999999999999997
No 416
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.92 E-value=7.3e-26 Score=249.32 Aligned_cols=243 Identities=20% Similarity=0.215 Sum_probs=163.1
Q ss_pred cccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccc
Q 001548 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1056)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1056)
+.+|.||+|.....-......+..+......-..+...-......+...+||||+.+..........
T Consensus 10 G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~------------- 76 (259)
T PF07714_consen 10 GSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPL------------- 76 (259)
T ss_dssp ESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSE-------------
T ss_pred CCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccc-------------
Confidence 4679999988741011101111122221111121222333345567777999999987775522221
Q ss_pred cCCCcccccCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcc
Q 001548 301 IGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1056)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~ 379 (1056)
..++|||.+|+|.++|... ...++......|+.||+.||.|||+++|+|+||+|+||+++.++.+||+|||+++..
T Consensus 77 ---~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~ 153 (259)
T PF07714_consen 77 ---FLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPI 153 (259)
T ss_dssp ---EEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEET
T ss_pred ---ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 1389999999999999887 567888899999999999999999999999999999999999999999999998765
Q ss_pred cccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcc
Q 001548 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1056)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~ 459 (1056)
......
T Consensus 154 ~~~~~~-------------------------------------------------------------------------- 159 (259)
T PF07714_consen 154 SEKSKY-------------------------------------------------------------------------- 159 (259)
T ss_dssp TTSSSE--------------------------------------------------------------------------
T ss_pred cccccc--------------------------------------------------------------------------
Confidence 210000
Q ss_pred cccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHH
Q 001548 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERAL 535 (1056)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~ 535 (1056)
.......+...|+|||.+.+..++.++||||||+++|||++ + |.....
T Consensus 160 ---------------------------~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~- 211 (259)
T PF07714_consen 160 ---------------------------KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN- 211 (259)
T ss_dssp ---------------------------EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH-
T ss_pred ---------------------------cccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence 00002234556999999999889999999999999999998 4 333222
Q ss_pred HHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001548 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1056)
Q Consensus 536 ~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~ 581 (1056)
......+.....++.....+..+.+++..||+.||.+||++.+|++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 212 EEIIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HHHHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred ccccccccccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 2223333433334444566888999999999999999999999986
No 417
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.92 E-value=2.8e-25 Score=253.95 Aligned_cols=221 Identities=16% Similarity=0.159 Sum_probs=154.0
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..+++...|||++.+.+....+.. . ..+||++. ++|.++++... .++...+..++.||+.||
T Consensus 71 ~~~l~~l~h~~iv~~~~~~~~~~~-----------~-----~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~ql~~aL 132 (335)
T PTZ00024 71 LKIMNEIKHENIMGLVDVYVEGDF-----------I-----NLVMDIMA-SDLKKVVDRKI-RLTESQVKCILLQILNGL 132 (335)
T ss_pred HHHHHhCCCcceeeeeEEEecCCc-----------E-----EEEEeccc-cCHHHHHHhcC-CCCHHHHHHHHHHHHHHH
Confidence 446778899999976655332111 1 13788886 59999997654 467779999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+|+||||+||+++.++.+|++|||+++....+........
T Consensus 133 ~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~-------------------------------- 180 (335)
T PTZ00024 133 NVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSK-------------------------------- 180 (335)
T ss_pred HHHHhCCeecccccHHHeEECCCCCEEECCccceeecccccccccccc--------------------------------
Confidence 999999999999999999999999999999999876552110000000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
+.+ .......+...++++|+|||
T Consensus 181 -------------------------~~~--------------------------------~~~~~~~~~~~~~~~y~aPE 203 (335)
T PTZ00024 181 -------------------------DET--------------------------------MQRREEMTSKVVTLWYRAPE 203 (335)
T ss_pred -------------------------ccc--------------------------------ccccccccccccccCCCCCh
Confidence 000 00001112445788999999
Q ss_pred cccCC-CCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhh--ccCCC--------------------C----CCCC
Q 001548 503 ELSGG-VCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDL--RDRIL--------------------P----PSFL 552 (1056)
Q Consensus 503 ~l~~~-~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~--~~~~l--------------------p----~~~~ 552 (1056)
.+.+. .++.++|||||||++|||+++ |............. ..... + ..+.
T Consensus 204 ~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (335)
T PTZ00024 204 LLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFP 283 (335)
T ss_pred hcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCc
Confidence 99874 469999999999999999986 33332222211111 11000 0 0122
Q ss_pred CCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhh
Q 001548 553 SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1056)
Q Consensus 553 ~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~ 590 (1056)
..+.++.+|+.+||+++|++||++.++|.||||.....
T Consensus 284 ~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~ 321 (335)
T PTZ00024 284 NASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPL 321 (335)
T ss_pred CCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCCC
Confidence 34677889999999999999999999999999987643
No 418
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.92 E-value=7.1e-25 Score=242.90 Aligned_cols=201 Identities=16% Similarity=0.131 Sum_probs=149.1
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC--------CCCCHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG--------HKGKRIECLYI 334 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~--------~~~~~~~~~~i 334 (1056)
..++....|||++.+......... ...+|++++|++|.+++.... ..++...++.+
T Consensus 59 ~~~l~~l~h~~iv~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~ 122 (275)
T cd05046 59 LDMFRKLSHKNVVRLLGLCREAEP----------------HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVAL 122 (275)
T ss_pred HHHHHhcCCcceeeeEEEECCCCc----------------ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHH
Confidence 456777789999876654321111 124899999999999997654 14678899999
Q ss_pred HHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccc
Q 001548 335 FRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (1056)
Q Consensus 335 ~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 414 (1056)
+.||+.||.|||++||+||||||+||+++.++.++++|||+++......
T Consensus 123 ~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~------------------------------- 171 (275)
T cd05046 123 CTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSE------------------------------- 171 (275)
T ss_pred HHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccccccCccc-------------------------------
Confidence 9999999999999999999999999999999999999999876432100
Q ss_pred ccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCcccccccccccccccccc
Q 001548 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (1056)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 494 (1056)
........+
T Consensus 172 -----------------------------------------------------------------------~~~~~~~~~ 180 (275)
T cd05046 172 -----------------------------------------------------------------------YYKLRNALI 180 (275)
T ss_pred -----------------------------------------------------------------------ccccCCcee
Confidence 000012345
Q ss_pred CCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCC-CCCCCCCChhHHHHHHhccccC
Q 001548 495 EKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRIL-PPSFLSENPKEAGFCLWQLHPE 569 (1056)
Q Consensus 495 t~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~l-p~~~~~~~~~~~~li~~lL~~d 569 (1056)
+..|+|||.+.+..++.++|||||||++|+|++ + |...... ..........+ .+.....+..+.+++.+||+.+
T Consensus 181 ~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~ 259 (275)
T cd05046 181 PLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE-EVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVN 259 (275)
T ss_pred EEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH-HHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCC
Confidence 667999999988889999999999999999997 3 3222222 22223332222 2233456778899999999999
Q ss_pred CCCCCCHHHHhhh
Q 001548 570 PLSRPTTREILQS 582 (1056)
Q Consensus 570 P~~Rpt~~eil~~ 582 (1056)
|.+||++.+++..
T Consensus 260 p~~Rp~~~~~l~~ 272 (275)
T cd05046 260 PKDRPSFSELVSA 272 (275)
T ss_pred cccCCCHHHHHHH
Confidence 9999999999874
No 419
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.92 E-value=3.1e-25 Score=243.90 Aligned_cols=199 Identities=15% Similarity=0.115 Sum_probs=149.2
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~QIl~g 341 (1056)
..+++...|+||+.+...... .. ...+|++++|++|.+++... +...+...++.++.||+.|
T Consensus 52 ~~~l~~l~~~~i~~~~~~~~~----------~~-------~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~a 114 (260)
T cd05073 52 ANVMKTLQHDKLVKLHAVVTK----------EP-------IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 114 (260)
T ss_pred HHHHHhcCCCCcceEEEEEcC----------CC-------eEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHH
Confidence 456788899999876444221 00 12389999999999999653 4557777899999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|.|||+.||+||||||+||+++..+.+|++|||+++........
T Consensus 115 L~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~------------------------------------ 158 (260)
T cd05073 115 MAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT------------------------------------ 158 (260)
T ss_pred HHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcc------------------------------------
Confidence 99999999999999999999999999999999988654310000
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
......++..|+||
T Consensus 159 ------------------------------------------------------------------~~~~~~~~~~y~~P 172 (260)
T cd05073 159 ------------------------------------------------------------------AREGAKFPIKWTAP 172 (260)
T ss_pred ------------------------------------------------------------------cccCCcccccccCH
Confidence 00012244569999
Q ss_pred ccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHH
Q 001548 502 EELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTR 577 (1056)
Q Consensus 502 E~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~ 577 (1056)
|++.+..++.++|||||||++|+|++ + |..... ......+......+.....+..+.+++.+||+++|.+||++.
T Consensus 173 E~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~ 251 (260)
T cd05073 173 EAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN-PEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFE 251 (260)
T ss_pred hHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH-HHHHHHHhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHH
Confidence 99998889999999999999999997 4 333222 222223333333344456678899999999999999999999
Q ss_pred HHhh
Q 001548 578 EILQ 581 (1056)
Q Consensus 578 eil~ 581 (1056)
+++.
T Consensus 252 ~l~~ 255 (260)
T cd05073 252 YIQS 255 (260)
T ss_pred HHHH
Confidence 8875
No 420
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.92 E-value=5.6e-24 Score=252.51 Aligned_cols=239 Identities=23% Similarity=0.382 Sum_probs=210.8
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceE-eecCCCCeEEEEEecCCCCEEEEEECCCcEEE
Q 001548 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAV-EMSNRSKLSCVCWNNYIKNYLASADYDGVVKL 855 (1056)
Q Consensus 777 ~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~-~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~l 855 (1056)
.+...+.+..|+ +.++++++.|++|++|+..+ ...... ..+|.+.|.++++... +.+|++|+.|.++++
T Consensus 206 ~~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~-------~~~i~~~l~GH~g~V~~l~~~~~-~~~lvsgS~D~t~rv 275 (537)
T KOG0274|consen 206 TDDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNN-------GYLILTRLVGHFGGVWGLAFPSG-GDKLVSGSTDKTERV 275 (537)
T ss_pred cCcchhhhheee--cCeEEecCCCceeEEeeccc-------ceEEEeeccCCCCCceeEEEecC-CCEEEEEecCCcEEe
Confidence 456678888888 77899999999999999874 223333 6799999999999874 789999999999999
Q ss_pred EEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEEEeC
Q 001548 856 WDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSA 934 (1056)
Q Consensus 856 WD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~lasGs~ 934 (1056)
||..+|+|..++.+|...|.+++..+ .++++||.|.+|++|++.++.++.++. |.+.|+||..+ +. ++++|+.
T Consensus 276 Wd~~sg~C~~~l~gh~stv~~~~~~~---~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~-~lvsgs~ 349 (537)
T KOG0274|consen 276 WDCSTGECTHSLQGHTSSVRCLTIDP---FLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EP-LLVSGSY 349 (537)
T ss_pred EecCCCcEEEEecCCCceEEEEEccC---ceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CC-EEEEEec
Confidence 99999999999999999999999854 688999999999999999999999998 89999999998 43 8999999
Q ss_pred CCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEECCCCCCCCCCCC-ceeEEecCCCCcEEEEE
Q 001548 935 DYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTN-ACSLTFSGHTNEKVGIC 1013 (1056)
Q Consensus 935 Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~-~~~~~~~gH~~~Vv~ls 1013 (1056)
|++|++||.++.+. ++.+.||..+|.++.+.....+++||.|++|++||+. +. .|+.++.+|.+.|.++.
T Consensus 350 d~~v~VW~~~~~~c-l~sl~gH~~~V~sl~~~~~~~~~Sgs~D~~IkvWdl~--------~~~~c~~tl~~h~~~v~~l~ 420 (537)
T KOG0274|consen 350 DGTVKVWDPRTGKC-LKSLSGHTGRVYSLIVDSENRLLSGSLDTTIKVWDLR--------TKRKCIHTLQGHTSLVSSLL 420 (537)
T ss_pred CceEEEEEhhhcee-eeeecCCcceEEEEEecCcceEEeeeeccceEeecCC--------chhhhhhhhcCCcccccccc
Confidence 99999999998776 8999999999999988644899999999999999998 45 79999999999985555
Q ss_pred ecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCCeEEE
Q 001548 1014 RLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWGCLLL 1053 (1056)
Q Consensus 1014 ~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~~~~~ 1053 (1056)
..+..|++++.|++|++||...+..+-
T Consensus 421 -------------~~~~~Lvs~~aD~~Ik~WD~~~~~~~~ 447 (537)
T KOG0274|consen 421 -------------LRDNFLVSSSADGTIKLWDAEEGECLR 447 (537)
T ss_pred -------------cccceeEeccccccEEEeecccCceee
Confidence 257888999999999999998877654
No 421
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.92 E-value=5.8e-26 Score=239.33 Aligned_cols=209 Identities=12% Similarity=0.163 Sum_probs=157.7
Q ss_pred CCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcC
Q 001548 270 ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQG 349 (1056)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~g 349 (1056)
.|+||+.++.-...+.... .++|-+.||.|...|.++. .+++.++..+.+.|+.||+|||.+|
T Consensus 134 gh~nilqLiefFEdd~~FY----------------LVfEKm~GGplLshI~~~~-~F~E~EAs~vvkdia~aLdFlH~kg 196 (463)
T KOG0607|consen 134 GHKNILQLIEFFEDDTRFY----------------LVFEKMRGGPLLSHIQKRK-HFNEREASRVVKDIASALDFLHTKG 196 (463)
T ss_pred CCccHHHHHHHhcccceEE----------------EEEecccCchHHHHHHHhh-hccHHHHHHHHHHHHHHHHHHhhcC
Confidence 6888888776644333222 3788999999999997764 4677799999999999999999999
Q ss_pred cccccCCCCCEEEccCCc---EEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccccccc
Q 001548 350 VTFLDLKPSSFKLLQSNQ---VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRW 426 (1056)
Q Consensus 350 IvHrDLKP~NILl~~~~~---vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 426 (1056)
|.||||||+|||-...++ |||+||.|...+.. +..
T Consensus 197 IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~------------------------------------~~~------ 234 (463)
T KOG0607|consen 197 IAHRDLKPENILCESPNKVSPVKICDFDLGSGIKL------------------------------------NND------ 234 (463)
T ss_pred cccccCCccceeecCCCCcCceeeecccccccccc------------------------------------CCC------
Confidence 999999999999987655 89999977644320 000
Q ss_pred ccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccC
Q 001548 427 WSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG 506 (1056)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~ 506 (1056)
++ ...+..+.+.+|+..|||||+..-
T Consensus 235 ----------------------------------------------------~s--pastP~L~tPvGSAEfMAPEVVd~ 260 (463)
T KOG0607|consen 235 ----------------------------------------------------CS--PASTPELLTPVGSAEFMAPEVVDV 260 (463)
T ss_pred ----------------------------------------------------CC--CCCCccccCcccchhhcchhHHhh
Confidence 00 012334567899999999998753
Q ss_pred -----CCCCccchhHHHHHHHHHHhCCCCcHH-----------------HHHHHHHhhccC---CCCCCCCCCChhHHHH
Q 001548 507 -----GVCTTSSNIYSLGVLFFELFGRFDSER-----------------ALAAAMSDLRDR---ILPPSFLSENPKEAGF 561 (1056)
Q Consensus 507 -----~~~t~~sDIwSLGvlL~eLlt~f~~~~-----------------~~~~~~~~~~~~---~lp~~~~~~~~~~~~l 561 (1056)
..|+.++|.|||||+||-||+||+++. -....+..+..+ .....|..++.+..++
T Consensus 261 fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdl 340 (463)
T KOG0607|consen 261 FVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDL 340 (463)
T ss_pred hccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHH
Confidence 458999999999999999998866551 111222223332 2234567788889999
Q ss_pred HHhccccCCCCCCCHHHHhhhhhhhhhhhh
Q 001548 562 CLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (1056)
Q Consensus 562 i~~lL~~dP~~Rpt~~eil~~~~~~~~~~~ 591 (1056)
+..+|..||.+|.++.++++|||+......
T Consensus 341 isnLlvrda~~rlsa~~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 341 ISNLLVRDAKQRLSAAQVLNHPWVQRCAPE 370 (463)
T ss_pred HHHHHhccHHhhhhhhhccCCccccccchh
Confidence 999999999999999999999999876443
No 422
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.92 E-value=3.8e-25 Score=253.84 Aligned_cols=220 Identities=20% Similarity=0.162 Sum_probs=150.2
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCC---CcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDL---GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl 339 (1056)
...+....|||++.+......+..... ........ ...+|+++. ++|.+++... .+++..++.++.||+
T Consensus 53 i~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~lv~e~~~-~~L~~~~~~~--~l~~~~~~~~~~qi~ 124 (342)
T cd07854 53 IKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNS-----VYIVQEYME-TDLANVLEQG--PLSEEHARLFMYQLL 124 (342)
T ss_pred HHHHHhcCCCcchhhHhhhcccccccccccccccccce-----EEEEeeccc-ccHHHHHHcC--CCCHHHHHHHHHHHH
Confidence 456777899999876554332221110 01111111 124777776 5999988643 467779999999999
Q ss_pred HHHHHhhhcCcccccCCCCCEEEcc-CCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccc
Q 001548 340 ALVDYHHTQGVTFLDLKPSSFKLLQ-SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (1056)
Q Consensus 340 ~gL~ylHs~gIvHrDLKP~NILl~~-~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 418 (1056)
.||.|||++||+||||||+||+++. ++.+|++|||+++.+......
T Consensus 125 ~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------- 171 (342)
T cd07854 125 RGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSH--------------------------------- 171 (342)
T ss_pred HHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccceecCCcccc---------------------------------
Confidence 9999999999999999999999974 457899999988654310000
Q ss_pred ccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCc
Q 001548 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (1056)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 498 (1056)
........++.+|
T Consensus 172 -------------------------------------------------------------------~~~~~~~~~~~~y 184 (342)
T cd07854 172 -------------------------------------------------------------------KGYLSEGLVTKWY 184 (342)
T ss_pred -------------------------------------------------------------------ccccccccccccc
Confidence 0000123578889
Q ss_pred cCcccccC-CCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccC----------------------CCC----
Q 001548 499 ASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDR----------------------ILP---- 548 (1056)
Q Consensus 499 ~APE~l~~-~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~----------------------~lp---- 548 (1056)
+|||.+.+ ..++.++|||||||++|+|+++ |............+... ..+
T Consensus 185 ~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (342)
T cd07854 185 RSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRP 264 (342)
T ss_pred cCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCC
Confidence 99998765 5578999999999999999986 43222222211111100 000
Q ss_pred --CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhh
Q 001548 549 --PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1056)
Q Consensus 549 --~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~ 590 (1056)
......+.++.+|+.+||.+||.+|||+.++|.||||.....
T Consensus 265 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~~ 308 (342)
T cd07854 265 LRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYSC 308 (342)
T ss_pred HHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccccC
Confidence 112346678889999999999999999999999999986543
No 423
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.92 E-value=8.3e-25 Score=271.45 Aligned_cols=101 Identities=20% Similarity=0.183 Sum_probs=82.5
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
..++...+||||+.+......... ...+|+|+.|++|.++|...+ .+++..++.|++||+.||
T Consensus 55 ~~~l~~l~hp~Iv~~~~~~~~~~~----------------~~lVmEy~~g~~L~~li~~~~-~l~~~~~~~i~~qil~aL 117 (669)
T cd05610 55 RDALALSKSPFIVHLYYSLQSANN----------------VYLVMEYLIGGDVKSLLHIYG-YFDEEMAVKYISEVALAL 117 (669)
T ss_pred HHHHHhcCCCCcCeEEEEEEECCE----------------EEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHH
Confidence 345667789999976544322111 124899999999999997654 466778999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~ 380 (1056)
+|||++||+||||||+||||+.++.+||+|||+++...
T Consensus 118 ~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~ 155 (669)
T cd05610 118 DYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTL 155 (669)
T ss_pred HHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCcccc
Confidence 99999999999999999999999999999999998543
No 424
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.92 E-value=5.5e-25 Score=244.19 Aligned_cols=202 Identities=17% Similarity=0.240 Sum_probs=148.7
Q ss_pred hhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Q 001548 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (1056)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ 343 (1056)
..++...|+|++.+......+. ....++++++ ++|.+++......++...++.++.||+.||.
T Consensus 50 ~~l~~~~~~~i~~~~~~~~~~~----------------~~~~v~e~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~ 112 (282)
T cd07829 50 SLLKELKHPNIVKLLDVIHTER----------------KLYLVFEYCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLA 112 (282)
T ss_pred HHHHhcCCCCHHHHHhhhhcCC----------------ceEEEecCcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHH
Confidence 3556667899887554432211 1124778887 4999999876556888899999999999999
Q ss_pred HhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccc
Q 001548 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (1056)
Q Consensus 344 ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 423 (1056)
|||++||+|+||+|+||+++.++.+||+|||+++......
T Consensus 113 ~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~---------------------------------------- 152 (282)
T cd07829 113 YCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPL---------------------------------------- 152 (282)
T ss_pred HHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCc----------------------------------------
Confidence 9999999999999999999999999999999886643100
Q ss_pred cccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCccc
Q 001548 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (1056)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 503 (1056)
.......++.+|+|||.
T Consensus 153 ---------------------------------------------------------------~~~~~~~~~~~~~aPE~ 169 (282)
T cd07829 153 ---------------------------------------------------------------RTYTHEVVTLWYRAPEI 169 (282)
T ss_pred ---------------------------------------------------------------cccCccccCcCcCChHH
Confidence 00112345678999999
Q ss_pred ccCC-CCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhc-------------------cCCCC--------CCCC
Q 001548 504 LSGG-VCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLR-------------------DRILP--------PSFL 552 (1056)
Q Consensus 504 l~~~-~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~-------------------~~~lp--------~~~~ 552 (1056)
+.+. .++.++|||||||++|||+++ |.............. ...++ ..++
T Consensus 170 ~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (282)
T cd07829 170 LLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLP 249 (282)
T ss_pred hcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcc
Confidence 9876 789999999999999999986 333322221111110 00011 1123
Q ss_pred CCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 553 SENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 553 ~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
..+..+.+|+.+||..||++||++.+++.||||
T Consensus 250 ~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 250 RLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred cccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 446778999999999999999999999999997
No 425
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.92 E-value=6.7e-25 Score=239.21 Aligned_cols=202 Identities=18% Similarity=0.193 Sum_probs=155.0
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....|||++.+......... ...+|++++|++|.+++... ..+++..+..++.|++.||
T Consensus 50 ~~~l~~l~~~~i~~~~~~~~~~~~----------------~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l 112 (254)
T cd06627 50 IDLLKNLKHPNIVKYIGSIETSDS----------------LYIILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGL 112 (254)
T ss_pred HHHHHhCCCCCccEEEEEEEeCCE----------------EEEEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHH
Confidence 345667789998876555332111 12488999999999999776 4577879999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+|+||||+||+++.++.++|+|||++........
T Consensus 113 ~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-------------------------------------- 154 (254)
T cd06627 113 AYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK-------------------------------------- 154 (254)
T ss_pred HHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc--------------------------------------
Confidence 999999999999999999999999999999998876541000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
......++..|+|||
T Consensus 155 -----------------------------------------------------------------~~~~~~~~~~y~~pe 169 (254)
T cd06627 155 -----------------------------------------------------------------DDASVVGTPYWMAPE 169 (254)
T ss_pred -----------------------------------------------------------------cccccccchhhcCHh
Confidence 001345677899999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHH
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~ei 579 (1056)
.+.+..++.++||||||+++|+|+++ |............. ....++.....++.+.+|+.+||.++|++||++.++
T Consensus 170 ~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~ 248 (254)
T cd06627 170 VIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIV-QDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQL 248 (254)
T ss_pred hhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHh-ccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHH
Confidence 99888889999999999999999986 33222222222222 233333344567889999999999999999999999
Q ss_pred hhhhhh
Q 001548 580 LQSEVT 585 (1056)
Q Consensus 580 l~~~~~ 585 (1056)
+.||||
T Consensus 249 l~~~~~ 254 (254)
T cd06627 249 LKHPWI 254 (254)
T ss_pred hcCCCC
Confidence 999997
No 426
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.92 E-value=6e-25 Score=241.36 Aligned_cols=235 Identities=14% Similarity=0.064 Sum_probs=162.4
Q ss_pred cccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccc
Q 001548 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1056)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1056)
+|.|+||++...+...+ ..+. ........ ..-......+....|||++.+......+..
T Consensus 17 g~~~~v~~~~~~~~~~~-----~vK~-~~~~~~~~-~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-------------- 75 (261)
T cd05034 17 GQFGEVWMGTWNGTTKV-----AVKT-LKPGTMSP-EAFLQEAQIMKKLRHDKLVQLYAVCSEEEP-------------- 75 (261)
T ss_pred CcceEEEEEEEcCCceE-----EEEE-ecCCccCH-HHHHHHHHHHhhCCCCCEeeeeeeeecCCc--------------
Confidence 57899999875433222 1111 11111111 111222446777789998876544321111
Q ss_pred cCCCcccccCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcc
Q 001548 301 IGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1056)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~ 379 (1056)
...+|++++|++|.+++.... ..++...++.++.||+.||.|||++||+|+||||+||+++.++.+|++|||+++.+
T Consensus 76 --~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~ 153 (261)
T cd05034 76 --IYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLI 153 (261)
T ss_pred --eEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceec
Confidence 123889999999999997643 56788899999999999999999999999999999999999999999999988665
Q ss_pred cccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcc
Q 001548 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1056)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~ 459 (1056)
......
T Consensus 154 ~~~~~~-------------------------------------------------------------------------- 159 (261)
T cd05034 154 EDDEYT-------------------------------------------------------------------------- 159 (261)
T ss_pred cchhhh--------------------------------------------------------------------------
Confidence 410000
Q ss_pred cccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHH
Q 001548 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERAL 535 (1056)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~ 535 (1056)
......++..|+|||.+.+..++.++|||||||++|||++ + |.+....
T Consensus 160 ----------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~ 211 (261)
T cd05034 160 ----------------------------AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR 211 (261)
T ss_pred ----------------------------hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 0001123456999999999889999999999999999997 4 3332222
Q ss_pred HHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001548 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1056)
Q Consensus 536 ~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~ 581 (1056)
. ....+.....++.....+..+.+++.+||..+|.+||++.++++
T Consensus 212 ~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 212 E-VLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred H-HHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 2 22222222223333445778899999999999999999999875
No 427
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.92 E-value=4.9e-25 Score=252.28 Aligned_cols=214 Identities=19% Similarity=0.231 Sum_probs=153.0
Q ss_pred hhhhccC-CCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Q 001548 263 AMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 263 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~g 341 (1056)
..++... .||||+.+......+... . -..+|+++.+ +|..++... .+++..++.++.||+.|
T Consensus 57 ~~~l~~l~~h~ni~~~~~~~~~~~~~-------~-------~~lv~e~~~~-~L~~~~~~~--~~~~~~~~~i~~qi~~~ 119 (337)
T cd07852 57 IMFLQELGDHPNIVKLLNVIKAENDK-------D-------IYLVFEYMET-DLHAVIRAN--ILEDVHKRYIMYQLLKA 119 (337)
T ss_pred HHHHHHhcCCCCccceeeeeccCCCc-------e-------EEEEeccccc-CHHHHHhcC--CCCHHHHHHHHHHHHHH
Confidence 4466677 899998766542211100 0 1137888874 999998765 66777889999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|.|||+.||+||||||+||+++.++.+|++|||+++........
T Consensus 120 L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~------------------------------------ 163 (337)
T cd07852 120 LKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEEN------------------------------------ 163 (337)
T ss_pred HHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccccccc------------------------------------
Confidence 99999999999999999999999999999999998765411000
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
..........||++|+||
T Consensus 164 --------------------------------------------------------------~~~~~~~~~~~~~~y~aP 181 (337)
T cd07852 164 --------------------------------------------------------------PENPVLTDYVATRWYRAP 181 (337)
T ss_pred --------------------------------------------------------------ccCcchhcccccccccCc
Confidence 000111245789999999
Q ss_pred ccccC-CCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHH--------------------------Hhhcc---CCCC
Q 001548 502 EELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERALAAAM--------------------------SDLRD---RILP 548 (1056)
Q Consensus 502 E~l~~-~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~--------------------------~~~~~---~~lp 548 (1056)
|++.+ ..++.++|||||||++|+|+++ |.......... ..+.. ..+.
T Consensus 182 E~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (337)
T cd07852 182 EILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLD 261 (337)
T ss_pred eeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchh
Confidence 98866 4578999999999999999987 32211111100 00000 1111
Q ss_pred CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhhh
Q 001548 549 PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (1056)
Q Consensus 549 ~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~~ 591 (1056)
......+..+.+||.+||+.||++|||+.++++|||+......
T Consensus 262 ~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~~ 304 (337)
T cd07852 262 ELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNP 304 (337)
T ss_pred hhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhccC
Confidence 2233457888999999999999999999999999999886443
No 428
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.92 E-value=6.2e-25 Score=244.75 Aligned_cols=204 Identities=16% Similarity=0.204 Sum_probs=150.0
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....|+|++.+......+... ..+++|++++.|..++... ..++...+..++.||+.||
T Consensus 51 ~~~l~~l~~~~i~~~~~~~~~~~~~----------------~iv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l 113 (288)
T cd07833 51 VKVLRQLRHENIVNLKEAFRRKGRL----------------YLVFEYVERTLLELLEASP-GGLPPDAVRSYIWQLLQAI 113 (288)
T ss_pred HHHHHhcCCCCeeehhheEEECCEE----------------EEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHH
Confidence 4566677899998876664432211 1378899987777666544 3467779999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+|+||||+||+++.++.+||+|||++........
T Consensus 114 ~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~-------------------------------------- 155 (288)
T cd07833 114 AYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA-------------------------------------- 155 (288)
T ss_pred HHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc--------------------------------------
Confidence 999999999999999999999999999999998866441000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
.......++.+|+|||
T Consensus 156 ----------------------------------------------------------------~~~~~~~~~~~~~~PE 171 (288)
T cd07833 156 ----------------------------------------------------------------SPLTDYVATRWYRAPE 171 (288)
T ss_pred ----------------------------------------------------------------ccccCcccccCCcCCc
Confidence 0011456788999999
Q ss_pred cccCC-CCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhh--ccC------------------CCCC---------
Q 001548 503 ELSGG-VCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDL--RDR------------------ILPP--------- 549 (1056)
Q Consensus 503 ~l~~~-~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~--~~~------------------~lp~--------- 549 (1056)
++.+. .++.++|||||||++|+|+++ |............. ... .+++
T Consensus 172 ~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (288)
T cd07833 172 LLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLER 251 (288)
T ss_pred hhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHH
Confidence 99887 789999999999999999986 33221111111100 000 0000
Q ss_pred CCC-CCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 550 SFL-SENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 550 ~~~-~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
.++ ..++++.+|+.+||.++|.+||++.++++||||
T Consensus 252 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 252 RYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred hcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 111 236778999999999999999999999999997
No 429
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.92 E-value=8.4e-25 Score=245.49 Aligned_cols=203 Identities=19% Similarity=0.158 Sum_probs=146.6
Q ss_pred hccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHh
Q 001548 266 VASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYH 345 (1056)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~yl 345 (1056)
.....|||++.+......+.... ..|+++ +++|..++......+++..+..++.||+.||.||
T Consensus 68 ~~~~~~~~i~~~~~~~~~~~~~~----------------~v~e~~-~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~l 130 (296)
T cd06618 68 LKSHDCPYIVKCYGYFITDSDVF----------------ICMELM-STCLDKLLKRIQGPIPEDILGKMTVAIVKALHYL 130 (296)
T ss_pred HhccCCCchHhhheeeecCCeEE----------------EEeecc-CcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 34445899987665533222111 256665 5588888876555788888999999999999999
Q ss_pred hh-cCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccccc
Q 001548 346 HT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFS 424 (1056)
Q Consensus 346 Hs-~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 424 (1056)
|+ .||+||||||+||+++.++.+||+|||++..+....
T Consensus 131 H~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~----------------------------------------- 169 (296)
T cd06618 131 KEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK----------------------------------------- 169 (296)
T ss_pred HhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCC-----------------------------------------
Confidence 97 599999999999999999999999999876543100
Q ss_pred ccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccc
Q 001548 425 RWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEEL 504 (1056)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l 504 (1056)
......++..|+|||.+
T Consensus 170 ---------------------------------------------------------------~~~~~~~~~~y~aPE~~ 186 (296)
T cd06618 170 ---------------------------------------------------------------AKTRSAGCAAYMAPERI 186 (296)
T ss_pred ---------------------------------------------------------------cccCCCCCccccCHhhc
Confidence 00022466779999999
Q ss_pred cCCC----CCccchhHHHHHHHHHHhCCCCcH---HHHHHHH-HhhccC-CCCCCCCCCChhHHHHHHhccccCCCCCCC
Q 001548 505 SGGV----CTTSSNIYSLGVLFFELFGRFDSE---RALAAAM-SDLRDR-ILPPSFLSENPKEAGFCLWQLHPEPLSRPT 575 (1056)
Q Consensus 505 ~~~~----~t~~sDIwSLGvlL~eLlt~f~~~---~~~~~~~-~~~~~~-~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt 575 (1056)
.+.. ++.++|||||||++|||+++..++ ....... ..+... ...+.....+.++.+|+.+||++||.+||+
T Consensus 187 ~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~ 266 (296)
T cd06618 187 DPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPK 266 (296)
T ss_pred CCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCC
Confidence 7653 789999999999999999873332 1212222 222221 111222245778999999999999999999
Q ss_pred HHHHhhhhhhhhhh
Q 001548 576 TREILQSEVTNEFQ 589 (1056)
Q Consensus 576 ~~eil~~~~~~~~~ 589 (1056)
+.++++||||....
T Consensus 267 ~~~il~~~~~~~~~ 280 (296)
T cd06618 267 YRELLQHPFIRRYE 280 (296)
T ss_pred HHHHhcChhhhccc
Confidence 99999999998643
No 430
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.92 E-value=9.6e-25 Score=242.54 Aligned_cols=206 Identities=17% Similarity=0.133 Sum_probs=149.7
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....||||+.+.......... ....+|++++|++|.+++......++...++.++.||+.||
T Consensus 57 i~~l~~l~~~~i~~~~~~~~~~~~~--------------~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL 122 (284)
T cd05038 57 IEILRTLDHENIVKYKGVCEKPGGR--------------SLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGM 122 (284)
T ss_pred HHHHHhCCCCChheEEeeeecCCCC--------------ceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHH
Confidence 4567778899998755432221100 11248999999999999987666688889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+|+||||+||+++.++.+|++|||++.........
T Consensus 123 ~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~------------------------------------- 165 (284)
T cd05038 123 DYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDY------------------------------------- 165 (284)
T ss_pred HHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcc-------------------------------------
Confidence 9999999999999999999999999999999988765411000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
........++..|+|||
T Consensus 166 ---------------------------------------------------------------~~~~~~~~~~~~~~~Pe 182 (284)
T cd05038 166 ---------------------------------------------------------------YYVKEPGESPIFWYAPE 182 (284)
T ss_pred ---------------------------------------------------------------eeccCCCCCcccccCcH
Confidence 00000112344599999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCCCCcHHH-----------------HHHHHHhhccCCCCCCCCCCChhHHHHHHhc
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGRFDSERA-----------------LAAAMSDLRDRILPPSFLSENPKEAGFCLWQ 565 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~f~~~~~-----------------~~~~~~~~~~~~lp~~~~~~~~~~~~li~~l 565 (1056)
.+.+..++.++|||||||++|||+++..+... .......+......+.....+..+.+|+.+|
T Consensus 183 ~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 262 (284)
T cd05038 183 CLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLC 262 (284)
T ss_pred HHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHH
Confidence 99888899999999999999999986322211 1111112222222233345567889999999
Q ss_pred cccCCCCCCCHHHHhhh
Q 001548 566 LHPEPLSRPTTREILQS 582 (1056)
Q Consensus 566 L~~dP~~Rpt~~eil~~ 582 (1056)
|+++|.+|||+.||++.
T Consensus 263 l~~~p~~Rpt~~ei~~~ 279 (284)
T cd05038 263 WEAEPQDRPSFADLILI 279 (284)
T ss_pred hccChhhCCCHHHHHHH
Confidence 99999999999999863
No 431
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.92 E-value=9.2e-25 Score=245.41 Aligned_cols=213 Identities=19% Similarity=0.171 Sum_probs=149.7
Q ss_pred hhhhccCCCCCCCcccceeeecC-CCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNG-SLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~g 341 (1056)
..+++..+|||++.+........ ......... .-..++++++| +|..++......++...++.++.||+.|
T Consensus 57 ~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~-------~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~a 128 (302)
T cd07864 57 IKILRQLNHRNIVNLKEIVTDKQDALDFKKDKG-------AFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEG 128 (302)
T ss_pred HHHHHhCCCCCeeeeeheecCcchhhhccccCC-------cEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 44677778999998655433211 000000000 11247888876 7888887665568888999999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|.|||++||+|+||||+||+++.++.+|++|||+++.......
T Consensus 129 L~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~------------------------------------- 171 (302)
T cd07864 129 LNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEES------------------------------------- 171 (302)
T ss_pred HHHHHhCCeecCCCCHHHEEECCCCcEEeCcccccccccCCcc-------------------------------------
Confidence 9999999999999999999999999999999998866441000
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
.......++..|+||
T Consensus 172 -----------------------------------------------------------------~~~~~~~~~~~y~~P 186 (302)
T cd07864 172 -----------------------------------------------------------------RPYTNKVITLWYRPP 186 (302)
T ss_pred -----------------------------------------------------------------cccccceeccCccCh
Confidence 000123456779999
Q ss_pred ccccC-CCCCccchhHHHHHHHHHHhCCCCcH---HHHHHH--HHhhccCCCC--------------------------C
Q 001548 502 EELSG-GVCTTSSNIYSLGVLFFELFGRFDSE---RALAAA--MSDLRDRILP--------------------------P 549 (1056)
Q Consensus 502 E~l~~-~~~t~~sDIwSLGvlL~eLlt~f~~~---~~~~~~--~~~~~~~~lp--------------------------~ 549 (1056)
|.+.+ ..++.++|||||||++|||+++..++ ...... +........+ .
T Consensus 187 E~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (302)
T cd07864 187 ELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLRE 266 (302)
T ss_pred HHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhh
Confidence 98876 45789999999999999999873222 211111 1111111111 1
Q ss_pred CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 550 ~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
.+...++.+.+|+..||+.||.+||++.+++.||||
T Consensus 267 ~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 267 EFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred hcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 122457788999999999999999999999999997
No 432
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.92 E-value=2e-25 Score=231.18 Aligned_cols=177 Identities=17% Similarity=0.199 Sum_probs=139.4
Q ss_pred ccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhh-cCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCC
Q 001548 308 SSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLD 386 (1056)
Q Consensus 308 ~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs-~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~ 386 (1056)
.++.+.-+..+|+.-...+++..+-++..-++.||.||.. +||||||+||+|||++..|+||++|||++-.+.++-+
T Consensus 170 MelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA-- 247 (391)
T KOG0983|consen 170 MELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA-- 247 (391)
T ss_pred HHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccc--
Confidence 3445566677777766678887888999999999999986 6999999999999999999999999999877653210
Q ss_pred CCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCC
Q 001548 387 IPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAG 466 (1056)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~ 466 (1056)
T Consensus 248 -------------------------------------------------------------------------------- 247 (391)
T KOG0983|consen 248 -------------------------------------------------------------------------------- 247 (391)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCccccccccccccccccccCCCccCcccccC---CCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHH
Q 001548 467 FGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG---GVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMS 540 (1056)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~---~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~ 540 (1056)
-+...|-+.|||||.|.- ..|+.++||||||++|+||.|+ |.+.......+.
T Consensus 248 ----------------------htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~lt 305 (391)
T KOG0983|consen 248 ----------------------HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLT 305 (391)
T ss_pred ----------------------cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHH
Confidence 114567888999999875 4589999999999999999986 555434444444
Q ss_pred hhccCCCC--CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001548 541 DLRDRILP--PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1056)
Q Consensus 541 ~~~~~~lp--~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~ 588 (1056)
.+.+...| +.....+|.+.+|+..||.+|+.+||...++|+|||+...
T Consensus 306 kvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~y 355 (391)
T KOG0983|consen 306 KVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRY 355 (391)
T ss_pred HHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeec
Confidence 44332112 2223479999999999999999999999999999998654
No 433
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.92 E-value=5.8e-25 Score=246.84 Aligned_cols=171 Identities=14% Similarity=0.151 Sum_probs=125.3
Q ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCc
Q 001548 312 GVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSE 391 (1056)
Q Consensus 312 GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~ 391 (1056)
+.++.+.++... ..++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.........
T Consensus 110 ~~~~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~----- 183 (294)
T PHA02882 110 VENTKEIFKRIK-CKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHI----- 183 (294)
T ss_pred ccCHHHHHHhhc-cCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCccc-----
Confidence 346777765543 34566889999999999999999999999999999999999999999999997754110000
Q ss_pred hhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCC
Q 001548 392 NYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYS 471 (1056)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~ 471 (1056)
T Consensus 184 -------------------------------------------------------------------------------- 183 (294)
T PHA02882 184 -------------------------------------------------------------------------------- 183 (294)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHH--------HHH
Q 001548 472 KSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAA--------AMS 540 (1056)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~--------~~~ 540 (1056)
...........||+.|+|||++.+..++.++|||||||+||||+++ |........ ...
T Consensus 184 -----------~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~ 252 (294)
T PHA02882 184 -----------EYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIK 252 (294)
T ss_pred -----------ccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHH
Confidence 0000001134699999999999999999999999999999999986 332211111 112
Q ss_pred hhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001548 541 DLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1056)
Q Consensus 541 ~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~ 581 (1056)
.+..... .....++.+.+++..|+..+|.+||++.+|++
T Consensus 253 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 253 RLHEGKI--KIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred Hhhhhhh--ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 2222111 12344677889999999999999999999986
No 434
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.92 E-value=3.4e-25 Score=262.46 Aligned_cols=242 Identities=19% Similarity=0.164 Sum_probs=187.3
Q ss_pred ccceeeeCCCCCcccccccc-ccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccc
Q 001548 222 GKGIVCRGPPLNAFKERRGM-IDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1056)
Q Consensus 222 g~Gvv~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1056)
-+|.||+|...+..+....+ ++.|+.+...-...+..--....+++...|||||.++.+..-..++..
T Consensus 498 aFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~M----------- 566 (774)
T KOG1026|consen 498 AFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCM----------- 566 (774)
T ss_pred hhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEE-----------
Confidence 57999999987666552222 333555444433233333444668999999999999988776666652
Q ss_pred cCCCcccccCCCCCHHHHHHhcCC---------C----CCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCc
Q 001548 301 IGGLRQGSSDHGVNLREWLNARGH---------K----GKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ 367 (1056)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~---------~----~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~ 367 (1056)
+.||+.-|||.+||+...+ . ++..+.++|+.||+.|++||-++.+|||||-..|+||.+.-.
T Consensus 567 -----vFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~ 641 (774)
T KOG1026|consen 567 -----VFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLV 641 (774)
T ss_pred -----EEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceE
Confidence 7899999999999976543 2 667789999999999999999999999999999999999999
Q ss_pred EEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCccccccccccc
Q 001548 368 VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDIN 447 (1056)
Q Consensus 368 vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 447 (1056)
|||+||||+|+.-..+... +.+
T Consensus 642 VKIsDfGLsRdiYssDYYk------------------------------~~~---------------------------- 663 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSDYYK------------------------------VRG---------------------------- 663 (774)
T ss_pred EEecccccchhhhhhhhhc------------------------------ccC----------------------------
Confidence 9999999999866321110 000
Q ss_pred ccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC
Q 001548 448 EVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG 527 (1056)
Q Consensus 448 d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt 527 (1056)
..+-...|||||.|.-+.||++|||||+||+|||+++
T Consensus 664 -------------------------------------------~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFs 700 (774)
T KOG1026|consen 664 -------------------------------------------NTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFS 700 (774)
T ss_pred -------------------------------------------CceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhc
Confidence 0111235999999999999999999999999999997
Q ss_pred ----CCCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001548 528 ----RFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1056)
Q Consensus 528 ----~f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~ 581 (1056)
|+.+. ...+.+..++.+.+.+....+++++..|+..||+.+|++||++.||-.
T Consensus 701 yG~QPy~gl-Sn~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~ 757 (774)
T KOG1026|consen 701 YGKQPYYGL-SNQEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHS 757 (774)
T ss_pred cccCccccc-chHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 23333 344566677777777888889999999999999999999999999843
No 435
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.92 E-value=8.1e-25 Score=242.42 Aligned_cols=220 Identities=14% Similarity=0.104 Sum_probs=154.1
Q ss_pred hhhccCC-CCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 264 MMVASNA-SPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 264 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
.++.... ||||+.+......+.. ...+|++++|++|.+++...+ .++...++.++.||+.||
T Consensus 53 ~~~~~l~~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l 115 (280)
T cd05581 53 EVLTRLNGHPGIIKLYYTFQDEEN----------------LYFVLEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLAL 115 (280)
T ss_pred HHHHhcccCCCchhHHHHhcCCce----------------EEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHH
Confidence 4455555 9999876544221111 124899999999999997765 577779999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||+.|++|+||||+||+++.++.++++|||++............. .++
T Consensus 116 ~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~-~~~----------------------------- 165 (280)
T cd05581 116 EYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNK-GDA----------------------------- 165 (280)
T ss_pred HHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCC-CCC-----------------------------
Confidence 99999999999999999999999999999999987765221110000 000
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
..++. ... ..........++..|+|||
T Consensus 166 -----------------------~~~~~--------~~~----------------------~~~~~~~~~~~~~~~~~Pe 192 (280)
T cd05581 166 -----------------------TNIDS--------QIE----------------------KNRRRFASFVGTAEYVSPE 192 (280)
T ss_pred -----------------------ccccc--------ccc----------------------ccccccccccCCccccCHH
Confidence 00000 000 0001112456888999999
Q ss_pred cccCCCCCccchhHHHHHHHHHHhCCCCcH---HHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCH---
Q 001548 503 ELSGGVCTTSSNIYSLGVLFFELFGRFDSE---RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT--- 576 (1056)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvlL~eLlt~f~~~---~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~--- 576 (1056)
.+.+..++.++|||||||++|+|+++..+. ....... .+.... .......++.+.+|+.+||+.+|.+||++
T Consensus 193 ~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~ 270 (280)
T cd05581 193 LLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQ-KILKLE-YSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEG 270 (280)
T ss_pred HhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHH-HHHhcC-CCCCCccCHHHHHHHHHHhcCCHhhCCCcccC
Confidence 998888999999999999999999873332 2211111 111111 11223447889999999999999999999
Q ss_pred -HHHhhhhhh
Q 001548 577 -REILQSEVT 585 (1056)
Q Consensus 577 -~eil~~~~~ 585 (1056)
.++++||||
T Consensus 271 ~~~ll~~~~~ 280 (280)
T cd05581 271 YDELKAHPFF 280 (280)
T ss_pred HHHHhcCCCC
Confidence 999999997
No 436
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.92 E-value=9.1e-25 Score=242.92 Aligned_cols=206 Identities=18% Similarity=0.204 Sum_probs=148.7
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....|||++.+......+. ... ...+++|+++ +|.+++......+++..++.++.||+.||
T Consensus 49 ~~~l~~l~~~~i~~~~~~~~~~~-------~~~-------~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al 113 (287)
T cd07840 49 IKLLQKLRHPNIVRLKEIVTSKG-------KGS-------IYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGL 113 (287)
T ss_pred HHHHHhccCCCeeeheeeEecCC-------CCc-------EEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHH
Confidence 34566667999887666543321 000 1237777765 99999977656788889999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++|++|+||||+||+++.++.+|++|||++.......
T Consensus 114 ~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~--------------------------------------- 154 (287)
T cd07840 114 QYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRN--------------------------------------- 154 (287)
T ss_pred HHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCC---------------------------------------
Confidence 99999999999999999999999999999999886644100
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
....+...++.+|+|||
T Consensus 155 ---------------------------------------------------------------~~~~~~~~~~~~y~~PE 171 (287)
T cd07840 155 ---------------------------------------------------------------SADYTNRVITLWYRPPE 171 (287)
T ss_pred ---------------------------------------------------------------cccccccccccccCCce
Confidence 00011345678899999
Q ss_pred cccC-CCCCccchhHHHHHHHHHHhCCCCc---HHHHHHHHHhhc--cCC----C----------------------CCC
Q 001548 503 ELSG-GVCTTSSNIYSLGVLFFELFGRFDS---ERALAAAMSDLR--DRI----L----------------------PPS 550 (1056)
Q Consensus 503 ~l~~-~~~t~~sDIwSLGvlL~eLlt~f~~---~~~~~~~~~~~~--~~~----l----------------------p~~ 550 (1056)
.+.+ ..++.++|||||||++|||+++..+ ............ ... + ...
T Consensus 172 ~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (287)
T cd07840 172 LLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREF 251 (287)
T ss_pred eeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHH
Confidence 8776 4579999999999999999987322 221111111100 000 0 001
Q ss_pred CCC-CChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001548 551 FLS-ENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1056)
Q Consensus 551 ~~~-~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~ 585 (1056)
+.. .++.+.+++.+||..+|.+||++.++++||||
T Consensus 252 ~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 252 FKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred hcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 112 27788899999999999999999999999997
No 437
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.92 E-value=2.2e-24 Score=238.18 Aligned_cols=195 Identities=14% Similarity=0.191 Sum_probs=146.3
Q ss_pred cCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHH
Q 001548 268 SNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVALVDY 344 (1056)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~QIl~gL~y 344 (1056)
...|||++.+......+.. -..+|||++|++|.+++.. .+..++...++.++.||+.||.|
T Consensus 65 ~~~h~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 128 (269)
T cd08528 65 QLRHPNIVRYYKTFLENDR----------------LYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRY 128 (269)
T ss_pred cCCCCCeeeEEeeEccCCe----------------EEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence 4679998876554332211 1248999999999998843 44567888999999999999999
Q ss_pred hhh-cCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccc
Q 001548 345 HHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (1056)
Q Consensus 345 lHs-~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 423 (1056)
||+ .||+|+||||+||+++.++.+|++|||++.......
T Consensus 129 lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~---------------------------------------- 168 (269)
T cd08528 129 LHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES---------------------------------------- 168 (269)
T ss_pred hccCCceeecCCCHHHEEECCCCcEEEecccceeeccccc----------------------------------------
Confidence 996 789999999999999999999999999886543100
Q ss_pred cccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCccc
Q 001548 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (1056)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 503 (1056)
..+...|+..|+|||.
T Consensus 169 ----------------------------------------------------------------~~~~~~~~~~~~~Pe~ 184 (269)
T cd08528 169 ----------------------------------------------------------------KLTSVVGTILYSCPEI 184 (269)
T ss_pred ----------------------------------------------------------------ccccccCcccCcChhh
Confidence 0113457778999999
Q ss_pred ccCCCCCccchhHHHHHHHHHHhCCCCcHH--HHHHHHHhhccCCCCCC-CCCCChhHHHHHHhccccCCCCCCCHHHHh
Q 001548 504 LSGGVCTTSSNIYSLGVLFFELFGRFDSER--ALAAAMSDLRDRILPPS-FLSENPKEAGFCLWQLHPEPLSRPTTREIL 580 (1056)
Q Consensus 504 l~~~~~t~~sDIwSLGvlL~eLlt~f~~~~--~~~~~~~~~~~~~lp~~-~~~~~~~~~~li~~lL~~dP~~Rpt~~eil 580 (1056)
+.+..++.++|||||||++|||+++..++. ........+.....++. ....++.+.+|+.+||+.||.+||++.|+.
T Consensus 185 ~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~ 264 (269)
T cd08528 185 VKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVS 264 (269)
T ss_pred hcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHH
Confidence 999889999999999999999998633321 11112222222322222 225678899999999999999999999987
Q ss_pred hh
Q 001548 581 QS 582 (1056)
Q Consensus 581 ~~ 582 (1056)
.+
T Consensus 265 ~~ 266 (269)
T cd08528 265 AM 266 (269)
T ss_pred HH
Confidence 64
No 438
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.92 E-value=1.9e-24 Score=219.91 Aligned_cols=248 Identities=20% Similarity=0.283 Sum_probs=204.3
Q ss_pred ccccccccccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCc
Q 001548 723 NDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKK 802 (1056)
Q Consensus 723 ~~~l~gh~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg~ 802 (1056)
..+..||.+.|-..... .+-....+++.|=+-|+||.-+++..-. ..|...|.+++|+.|.++|+|||.++-
T Consensus 52 igtfeghkgavw~~~l~--~na~~aasaaadftakvw~a~tgdelhs------f~hkhivk~~af~~ds~~lltgg~ekl 123 (334)
T KOG0278|consen 52 IGTFEGHKGAVWSATLN--KNATRAASAAADFTAKVWDAVTGDELHS------FEHKHIVKAVAFSQDSNYLLTGGQEKL 123 (334)
T ss_pred EEeeeccCcceeeeecC--chhhhhhhhcccchhhhhhhhhhhhhhh------hhhhheeeeEEecccchhhhccchHHH
Confidence 44566777766433221 1112223677888999999766654322 368999999999999999999999999
Q ss_pred EEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecC
Q 001548 803 IKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQV 882 (1056)
Q Consensus 803 I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~ 882 (1056)
++|||++.. ...|....+|.+.|..+.|... .+.++|+++|++||+||.+++..++++. ....|+++..++
T Consensus 124 lrvfdln~p------~App~E~~ghtg~Ir~v~wc~e-D~~iLSSadd~tVRLWD~rTgt~v~sL~-~~s~VtSlEvs~- 194 (334)
T KOG0278|consen 124 LRVFDLNRP------KAPPKEISGHTGGIRTVLWCHE-DKCILSSADDKTVRLWDHRTGTEVQSLE-FNSPVTSLEVSQ- 194 (334)
T ss_pred hhhhhccCC------CCCchhhcCCCCcceeEEEecc-CceEEeeccCCceEEEEeccCcEEEEEe-cCCCCcceeecc-
Confidence 999999852 2344455689999999999987 7788899999999999999999999886 668899999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceeEEEeCCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEE
Q 001548 883 HPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSY 962 (1056)
Q Consensus 883 d~~~laSgs~Dg~V~IWDlr~~~~~~~~~~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~ 962 (1056)
++++|.+ .+-++|+.||..+-..++.++...+|.+..++|+.. ++++|+.|+.++.||..++...-..-++|-++|.|
T Consensus 195 dG~ilTi-a~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~-~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhc 272 (334)
T KOG0278|consen 195 DGRILTI-AYGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKKE-FFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHC 272 (334)
T ss_pred CCCEEEE-ecCceeEEeccccccceeeccCccccccccccCCCc-eEEecCcceEEEEEeccCCceeeecccCCCCceEE
Confidence 8886544 577899999999999999999999999999999985 99999999999999999998744435999999999
Q ss_pred EEEc-CCCEEEEEECCCeEEEEECCCCC
Q 001548 963 VKFL-DSGTLVTASTDNKLKLWDLKRTS 989 (1056)
Q Consensus 963 l~fs-~~~~L~SgS~Dg~IkiWdl~~~~ 989 (1056)
|.|+ ++...++||.||+|+||.+...+
T Consensus 273 VrFSPdGE~yAsGSEDGTirlWQt~~~~ 300 (334)
T KOG0278|consen 273 VRFSPDGELYASGSEDGTIRLWQTTPGK 300 (334)
T ss_pred EEECCCCceeeccCCCceEEEEEecCCC
Confidence 9999 56668899999999999987443
No 439
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.92 E-value=2.2e-22 Score=240.83 Aligned_cols=276 Identities=12% Similarity=0.121 Sum_probs=189.0
Q ss_pred eEEeEEEeeeecCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCE
Q 001548 765 EVQGMLRTGEFNNSANVICSISFDRDE-DHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNY 843 (1056)
Q Consensus 765 ~~~~~l~~~~l~~h~~~V~sv~fspdg-~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~ 843 (1056)
.+.+.+.. .+..|+..|..++.++.. .+|+|||.||+||+|+.....................+.+.++...+. ++.
T Consensus 1035 ~p~G~lVA-hL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~-~~~ 1112 (1431)
T KOG1240|consen 1035 NPRGILVA-HLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGN-GDQ 1112 (1431)
T ss_pred CccceEee-hhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccC-CCe
Confidence 45556654 466888888888887654 999999999999999998644332222222222235788889888887 889
Q ss_pred EEEEECCCcEEEEEcCCC-------ceEEEEecCC-Cc-EEEEEEecCCCC-EEEEEeCCCcEEEEECCCCceeEEEeC-
Q 001548 844 LASADYDGVVKLWDACTG-------QTVSHYIEHE-KR-AWSVDFSQVHPT-KLASGSDDCSVKLWNINEKNSLATIKN- 912 (1056)
Q Consensus 844 LaSgs~Dg~V~lWD~~t~-------~~v~~~~~H~-~~-V~sv~fsp~d~~-~laSgs~Dg~V~IWDlr~~~~~~~~~~- 912 (1056)
+|.|+.||.|++.++... .+.+....+. +. |..-+|...... .++.+..-+.|..||+|+...++++++
T Consensus 1113 ~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~ 1192 (1431)
T KOG1240|consen 1113 FAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQ 1192 (1431)
T ss_pred EEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcC
Confidence 999999999999998651 1222222222 22 333344433445 778888889999999999888887764
Q ss_pred --CCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc--CC--CEEEEE-E-CCCeEEEEE
Q 001548 913 --IANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL--DS--GTLVTA-S-TDNKLKLWD 984 (1056)
Q Consensus 913 --~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs--~~--~~L~Sg-S-~Dg~IkiWd 984 (1056)
++.|++++.+|.++ .++.|+..|.+.+||+|-......-..+|..++..|..+ .. ...+++ + ..+.|.+|+
T Consensus 1193 ~~hG~vTSi~idp~~~-WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn 1271 (1431)
T KOG1240|consen 1193 LRHGLVTSIVIDPWCN-WLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWN 1271 (1431)
T ss_pred ccccceeEEEecCCce-EEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeee
Confidence 57899999999997 999999999999999997665333445667788877776 22 444444 4 578899999
Q ss_pred CCCCCCCCCCCCceeEEecCCCC-cE-EEEEec-----CCccee-eEEeeCCCCEEEEEEcCCcEEEEeCCCCeE
Q 001548 985 LKRTSHTGPSTNACSLTFSGHTN-EK-VGICRL-----EHNLFP-FTIFNLSDCWLLLVCFDFTTLSFRTSWGCL 1051 (1056)
Q Consensus 985 l~~~~~~~~~~~~~~~~~~gH~~-~V-v~ls~~-----~~~~~~-~~~~s~~g~~l~s~s~D~~v~iW~v~~~~~ 1051 (1056)
+.. |.|..+|..-.+ +. ....+. +..+.. +++..-.+..+++++.|.+|+.||..|.+.
T Consensus 1272 ~~~--------g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ 1338 (1431)
T KOG1240|consen 1272 MET--------GLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEI 1338 (1431)
T ss_pred ccc--------CcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCccc
Confidence 983 444455543311 11 111111 222222 233444557789999999999999998764
No 440
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.92 E-value=2.9e-25 Score=255.79 Aligned_cols=242 Identities=15% Similarity=0.141 Sum_probs=177.2
Q ss_pred cccceeeeCCCCCcccccccccccccccc-ccCCch-hHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcc
Q 001548 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVT-TTMPSD-AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1056)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1056)
+-+|.||+|...-.-......++.+.... .....+ ...--..+.+|+...||||+.+...++-..++.+
T Consensus 168 GaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~i--------- 238 (474)
T KOG0194|consen 168 GAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLML--------- 238 (474)
T ss_pred ccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEE---------
Confidence 35699999987211110000012221111 112222 2223344568899999999999999887777763
Q ss_pred cccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhc
Q 001548 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1056)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~ 378 (1056)
+||+|.||+|.++|++.+..++..+...++.|.+.||+|||++++|||||-..|+|+..++.+||+|||+++.
T Consensus 239 -------vmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~ 311 (474)
T KOG0194|consen 239 -------VMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRA 311 (474)
T ss_pred -------EEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccC
Confidence 9999999999999998877788889999999999999999999999999999999999999999999999866
Q ss_pred ccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCc
Q 001548 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1056)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~ 458 (1056)
...-... ++
T Consensus 312 ~~~~~~~--------------------------------------------------------------~~--------- 320 (474)
T KOG0194|consen 312 GSQYVMK--------------------------------------------------------------KF--------- 320 (474)
T ss_pred Ccceeec--------------------------------------------------------------cc---------
Confidence 3200000 00
Q ss_pred ccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC----CCCcHHH
Q 001548 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG----RFDSERA 534 (1056)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt----~f~~~~~ 534 (1056)
..--...|+|||.+..+.|++++||||+||++||+++ ||++...
T Consensus 321 --------------------------------~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~ 368 (474)
T KOG0194|consen 321 --------------------------------LKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKN 368 (474)
T ss_pred --------------------------------cccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCH
Confidence 0001123999999999999999999999999999996 4666655
Q ss_pred HHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001548 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1056)
Q Consensus 535 ~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~ 581 (1056)
.......+......+.....++....++..|+..+|++||++.++.+
T Consensus 369 ~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 369 YEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred HHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 55555554555444444455666779999999999999999999876
No 441
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.91 E-value=3.2e-24 Score=237.22 Aligned_cols=208 Identities=13% Similarity=0.093 Sum_probs=147.1
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcC-----CCCCHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-----HKGKRIECLYIFRQ 337 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-----~~~~~~~~~~i~~Q 337 (1056)
...++...|||++.+........... ...++ ...++|+.+++|.+++.... ..++...++.++.|
T Consensus 52 ~~~l~~l~h~~i~~~~~~~~~~~~~~---~~~~~-------~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~ 121 (273)
T cd05074 52 AACMKEFDHPNVIKLIGVSLRSRAKG---RLPIP-------MVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMID 121 (273)
T ss_pred HHHHhcCCCCCcceEEEEEccCCCCC---cccce-------EEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHH
Confidence 45678889999998766533221111 00111 12577899999999874321 23577789999999
Q ss_pred HHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccc
Q 001548 338 IVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (1056)
Q Consensus 338 Il~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 417 (1056)
|+.||+|||+.||+||||||+||+++.++.+|++|||+++........
T Consensus 122 i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~-------------------------------- 169 (273)
T cd05074 122 IASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYY-------------------------------- 169 (273)
T ss_pred HHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccccccccCCcce--------------------------------
Confidence 999999999999999999999999999999999999988764310000
Q ss_pred cccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCC
Q 001548 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (1056)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 497 (1056)
.......+++.
T Consensus 170 ---------------------------------------------------------------------~~~~~~~~~~~ 180 (273)
T cd05074 170 ---------------------------------------------------------------------RQGCASKLPVK 180 (273)
T ss_pred ---------------------------------------------------------------------ecCCCccCchh
Confidence 00001223456
Q ss_pred ccCcccccCCCCCccchhHHHHHHHHHHhC-C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCC
Q 001548 498 YASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (1056)
Q Consensus 498 Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~R 573 (1056)
|++||.+.+..++.++|||||||++|||++ + |....... ....+.....++.....++.+.+++.+||.++|.+|
T Consensus 181 ~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R 259 (273)
T cd05074 181 WLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE-IYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCR 259 (273)
T ss_pred hcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH-HHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhC
Confidence 999999998889999999999999999997 4 32222221 222222222222223557889999999999999999
Q ss_pred CCHHHHhhh
Q 001548 574 PTTREILQS 582 (1056)
Q Consensus 574 pt~~eil~~ 582 (1056)
|++.++++.
T Consensus 260 ps~~~~~~~ 268 (273)
T cd05074 260 PSFQHLRDQ 268 (273)
T ss_pred cCHHHHHHH
Confidence 999999874
No 442
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.91 E-value=1.9e-24 Score=236.23 Aligned_cols=201 Identities=21% Similarity=0.189 Sum_probs=154.6
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR---GHKGKRIECLYIFRQIV 339 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~---~~~~~~~~~~~i~~QIl 339 (1056)
...++...||||+.+......+. ....++++++|++|.+++... +..+++..+..++.||+
T Consensus 50 ~~~l~~l~~~~i~~~~~~~~~~~----------------~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~ 113 (256)
T cd08530 50 IRILASVNHPNIISYKEAFLDGN----------------KLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLL 113 (256)
T ss_pred HHHHHhCCCCCchhhhhhhccCC----------------EEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHH
Confidence 45677778999887544322110 112488899999999998652 34577778999999999
Q ss_pred HHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccc
Q 001548 340 ALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (1056)
Q Consensus 340 ~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 419 (1056)
.||.|||++||+|+||+|+||+++.++.+|++|||+++.....
T Consensus 114 ~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~------------------------------------- 156 (256)
T cd08530 114 RGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN------------------------------------- 156 (256)
T ss_pred HHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC-------------------------------------
Confidence 9999999999999999999999999999999999988664410
Q ss_pred cccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCcc
Q 001548 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (1056)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 499 (1056)
......+++.|+
T Consensus 157 --------------------------------------------------------------------~~~~~~~~~~~~ 168 (256)
T cd08530 157 --------------------------------------------------------------------MAKTQIGTPHYM 168 (256)
T ss_pred --------------------------------------------------------------------CcccccCCcccc
Confidence 000234677899
Q ss_pred CcccccCCCCCccchhHHHHHHHHHHhCCC---CcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCH
Q 001548 500 SPEELSGGVCTTSSNIYSLGVLFFELFGRF---DSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT 576 (1056)
Q Consensus 500 APE~l~~~~~t~~sDIwSLGvlL~eLlt~f---~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~ 576 (1056)
|||.+.+..++.++|+||||+++|||+++. ...... .....+.....++.....+..+.+++.+||+++|.+||++
T Consensus 169 ~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~ 247 (256)
T cd08530 169 APEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ-DLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNC 247 (256)
T ss_pred CHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCH
Confidence 999999988999999999999999999863 322222 1222233344444444667889999999999999999999
Q ss_pred HHHhhhhhh
Q 001548 577 REILQSEVT 585 (1056)
Q Consensus 577 ~eil~~~~~ 585 (1056)
.++++||++
T Consensus 248 ~~~l~~p~~ 256 (256)
T cd08530 248 DKILASPAV 256 (256)
T ss_pred HHHhcCCCC
Confidence 999999974
No 443
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.91 E-value=7.2e-25 Score=253.67 Aligned_cols=192 Identities=20% Similarity=0.183 Sum_probs=147.3
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcc
Q 001548 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1056)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1056)
..+|+|-||+|.+ +..+..++.+.........+..+--.....++..+|||||...+......+ .+.++.+-.
T Consensus 22 G~Ga~g~V~rgrn----ketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~---~~~~~~~vl 94 (732)
T KOG4250|consen 22 GKGAFGNVYRGRN----KETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFL---GLVTRLPVL 94 (732)
T ss_pred cCCccceeeeecc----cccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCcccc---CcccccceE
Confidence 3468899999995 121233444444443444454554455667888999999986665333222 334555554
Q ss_pred cccCCCcccccCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccC--Cc--EEEeC
Q 001548 299 CWIGGLRQGSSDHGVNLREWLNAR--GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS--NQ--VKYIG 372 (1056)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~--~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~--~~--vkl~D 372 (1056)
+||||.||+|+..|++. ...+++.+.+.++..+..||.|||.+|||||||||.||++... |+ .||+|
T Consensus 95 -------vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtD 167 (732)
T KOG4250|consen 95 -------VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTD 167 (732)
T ss_pred -------EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeec
Confidence 89999999999999663 3468888999999999999999999999999999999999643 33 79999
Q ss_pred cchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCC
Q 001548 373 PIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIP 452 (1056)
Q Consensus 373 fgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~ 452 (1056)
||.||.+.+.
T Consensus 168 fG~Arel~d~---------------------------------------------------------------------- 177 (732)
T KOG4250|consen 168 FGAARELDDN---------------------------------------------------------------------- 177 (732)
T ss_pred ccccccCCCC----------------------------------------------------------------------
Confidence 9999987621
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccC-CCCCccchhHHHHHHHHHHhCC
Q 001548 453 HSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR 528 (1056)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~t~~sDIwSLGvlL~eLlt~ 528 (1056)
..+++.+||+.|.+||++.. +.|+.-+|.|||||++|++.||
T Consensus 178 ----------------------------------s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG 220 (732)
T KOG4250|consen 178 ----------------------------------SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATG 220 (732)
T ss_pred ----------------------------------CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhcc
Confidence 12347899999999999994 8899999999999999999997
No 444
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.91 E-value=2.2e-25 Score=247.08 Aligned_cols=252 Identities=17% Similarity=0.182 Sum_probs=182.0
Q ss_pred HHHhhhcc--ccceeeeCCCCCccccccccccccccccccCCchhHH-HHhhhhhhccCCCCCCCcccceeeecCCCCCC
Q 001548 214 FFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAAL-KAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1056)
Q Consensus 214 ~~~k~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1056)
-|--..|+ -+|+||-|.- +...+..++ +..-+.+|+.-+.. --..++++....||-||.+.-...
T Consensus 566 if~devLGSGQFG~VYgg~h--RktGrdVAv--KvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~E-------- 633 (888)
T KOG4236|consen 566 IFADEVLGSGQFGTVYGGKH--RKTGRDVAV--KVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFE-------- 633 (888)
T ss_pred hhhHhhccCCcceeeeccee--cccCceeee--eeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeec--------
Confidence 33344444 4599999986 222222222 22333345554332 122356788889999886432211
Q ss_pred cCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccC---Cc
Q 001548 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS---NQ 367 (1056)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~---~~ 367 (1056)
-.+.. .++||-..|.=|.-.|.+....+++...+.++.|||.||.|||-+||+|+||||+|||+.+. -+
T Consensus 634 ---T~erv-----FVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQ 705 (888)
T KOG4236|consen 634 ---TPERV-----FVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQ 705 (888)
T ss_pred ---CCceE-----EEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCc
Confidence 11112 24788888766666666665667777899999999999999999999999999999999643 57
Q ss_pred EEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCccccccccccc
Q 001548 368 VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDIN 447 (1056)
Q Consensus 368 vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 447 (1056)
+||+|||.||.+++...
T Consensus 706 vKlCDFGfARiIgEksF--------------------------------------------------------------- 722 (888)
T KOG4236|consen 706 VKLCDFGFARIIGEKSF--------------------------------------------------------------- 722 (888)
T ss_pred eeeccccceeecchhhh---------------------------------------------------------------
Confidence 99999999999873110
Q ss_pred ccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC
Q 001548 448 EVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG 527 (1056)
Q Consensus 448 d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt 527 (1056)
-.+.+|||.|.|||++..+.|..+-|+||+|||+|--|.
T Consensus 723 -----------------------------------------RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLS 761 (888)
T KOG4236|consen 723 -----------------------------------------RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLS 761 (888)
T ss_pred -----------------------------------------hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEec
Confidence 016799999999999999999999999999999999997
Q ss_pred C---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001548 528 R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1056)
Q Consensus 528 ~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~ 589 (1056)
| |..+++....+....--..|..|...++...+||..+|+..-.+|.+....|.|||+++..
T Consensus 762 GTFPFNEdEdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq 826 (888)
T KOG4236|consen 762 GTFPFNEDEDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQ 826 (888)
T ss_pred ccccCCCccchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcch
Confidence 6 4333333333332222234556778899999999999999999999999999999998753
No 445
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.91 E-value=1.8e-24 Score=241.77 Aligned_cols=181 Identities=19% Similarity=0.179 Sum_probs=139.8
Q ss_pred cccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhccccccc
Q 001548 305 RQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESAS 384 (1056)
Q Consensus 305 ~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~ 384 (1056)
.++++++|++|.++|.... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+|++|||+++.......
T Consensus 82 lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (290)
T cd05613 82 LILDYINGGELFTHLSQRE-RFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV 160 (290)
T ss_pred EEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccc
Confidence 4899999999999997654 466778999999999999999999999999999999999999999999998865431000
Q ss_pred CCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCccccccc
Q 001548 385 LDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTN 464 (1056)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~ 464 (1056)
T Consensus 161 -------------------------------------------------------------------------------- 160 (290)
T cd05613 161 -------------------------------------------------------------------------------- 160 (290)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCCccccccccccccccccccCCCccCcccccC--CCCCccchhHHHHHHHHHHhCCCCcHH------HHH
Q 001548 465 AGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG--GVCTTSSNIYSLGVLFFELFGRFDSER------ALA 536 (1056)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~--~~~t~~sDIwSLGvlL~eLlt~f~~~~------~~~ 536 (1056)
.......|+..|+|||.+.+ ..++.++|||||||++|+|+++..++. ...
T Consensus 161 ----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~ 218 (290)
T cd05613 161 ----------------------ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQA 218 (290)
T ss_pred ----------------------cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHH
Confidence 00013467888999999876 346889999999999999998743321 111
Q ss_pred HHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCC-----CHHHHhhhhhhhhhh
Q 001548 537 AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP-----TTREILQSEVTNEFQ 589 (1056)
Q Consensus 537 ~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rp-----t~~eil~~~~~~~~~ 589 (1056)
.....+... .++.....++.+.+|+.+||..||.+|| ++.+++.||||....
T Consensus 219 ~~~~~~~~~-~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 219 EISRRILKS-EPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred HHHHHhhcc-CCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence 122222111 2233345678899999999999999997 889999999998764
No 446
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.91 E-value=2e-23 Score=229.30 Aligned_cols=257 Identities=21% Similarity=0.297 Sum_probs=207.7
Q ss_pred ccccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEE-----eeeecCCCCCEEEEEEcCC-CCEEEEEeCCCc
Q 001548 729 RENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLR-----TGEFNNSANVICSISFDRD-EDHFAAAGVSKK 802 (1056)
Q Consensus 729 h~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~-----~~~l~~h~~~V~sv~fspd-g~~latg~~Dg~ 802 (1056)
|.+.|..+++. .++|.-+.+.+..+.+.|||+.+........ .-.+.+|...=.+++|++. .-.+++|+.|++
T Consensus 123 h~gEVnRaRym-PQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~ 201 (422)
T KOG0264|consen 123 HDGEVNRARYM-PQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHT 201 (422)
T ss_pred CCccchhhhhC-CCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCCc
Confidence 66677666662 2344433455778889999998664433211 1146789888888999985 457899999999
Q ss_pred EEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcC--CCceEEEEecCCCcEEEEEEe
Q 001548 803 IKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDAC--TGQTVSHYIEHEKRAWSVDFS 880 (1056)
Q Consensus 803 I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~--t~~~v~~~~~H~~~V~sv~fs 880 (1056)
|.+||+...............+.+|...|.+++|++.+..+|++++.|+.+.|||++ +.++.....+|..+|+|++|+
T Consensus 202 i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fn 281 (422)
T KOG0264|consen 202 ICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFN 281 (422)
T ss_pred EEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeC
Confidence 999999863222222334456778999999999999989999999999999999999 566777888999999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCc-eeEEEe-CCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCc----------
Q 001548 881 QVHPTKLASGSDDCSVKLWNINEKN-SLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARA---------- 948 (1056)
Q Consensus 881 p~d~~~laSgs~Dg~V~IWDlr~~~-~~~~~~-~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~---------- 948 (1056)
|.++.+|||||.|++|.+||+|+-. ++.++. |...|.+|.|+|+...+||+++.|+.+.+||+..-..
T Consensus 282 p~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dg 361 (422)
T KOG0264|consen 282 PFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDG 361 (422)
T ss_pred CCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccC
Confidence 9999999999999999999999864 566665 7788999999999999999999999999999975322
Q ss_pred ---ceEEecCCCCCeEEEEEcCC--CEEEEEECCCeEEEEECC
Q 001548 949 ---PWCVLAGHEKAVSYVKFLDS--GTLVTASTDNKLKLWDLK 986 (1056)
Q Consensus 949 ---~~~~l~gH~~~V~~l~fs~~--~~L~SgS~Dg~IkiWdl~ 986 (1056)
++.+..||+..|+.+.|+|. -.|+|.+.|+.+.||...
T Consensus 362 ppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 362 PPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred CcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 34667899999999999954 459999999999999986
No 447
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.91 E-value=3e-24 Score=233.85 Aligned_cols=200 Identities=20% Similarity=0.214 Sum_probs=152.5
Q ss_pred hhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Q 001548 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (1056)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ 343 (1056)
.+++...|||++.+......+... ...|++++|++|.+++...+ .+++..+..++.||+.||.
T Consensus 45 ~~l~~l~h~~i~~~~~~~~~~~~~----------------~~v~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~ 107 (250)
T cd05123 45 NILSRINHPFIVKLHYAFQTEEKL----------------YLVLEYAPGGELFSHLSKEG-RFSEERARFYAAEIVLALE 107 (250)
T ss_pred HHHHHcCCCcHHHHHHHeecCCee----------------EEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHH
Confidence 467777899988765443211111 23889999999999997764 4677799999999999999
Q ss_pred HhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccc
Q 001548 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (1056)
Q Consensus 344 ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 423 (1056)
|+|+.|++|+||||+||+++.++.++++|||++.......
T Consensus 108 ~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~---------------------------------------- 147 (250)
T cd05123 108 YLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG---------------------------------------- 147 (250)
T ss_pred HHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC----------------------------------------
Confidence 9999999999999999999999999999999886643100
Q ss_pred cccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCccc
Q 001548 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (1056)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 503 (1056)
.......++..|+|||.
T Consensus 148 ---------------------------------------------------------------~~~~~~~~~~~~~~Pe~ 164 (250)
T cd05123 148 ---------------------------------------------------------------SRTNTFCGTPEYLAPEV 164 (250)
T ss_pred ---------------------------------------------------------------CcccCCcCCccccChHH
Confidence 00013456778999999
Q ss_pred ccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCH---H
Q 001548 504 LSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT---R 577 (1056)
Q Consensus 504 l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~---~ 577 (1056)
+.+..++.++|+|||||++|+|+++ |...... .....+.... ++.....+..+.+|+.+||..||.+||++ .
T Consensus 165 ~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~-~~~~~~~~~~-~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~ 242 (250)
T cd05123 165 LLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRK-EIYEKILKDP-LRFPEFLSPEARDLISGLLQKDPTKRLGSGGAE 242 (250)
T ss_pred hCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHhcCC-CCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHH
Confidence 9988889999999999999999986 3332221 2222222211 22223347888999999999999999999 9
Q ss_pred HHhhhhhh
Q 001548 578 EILQSEVT 585 (1056)
Q Consensus 578 eil~~~~~ 585 (1056)
+++.||||
T Consensus 243 ~l~~~~~f 250 (250)
T cd05123 243 EIKAHPFF 250 (250)
T ss_pred HHHhCCCC
Confidence 99999997
No 448
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.91 E-value=3.7e-23 Score=235.85 Aligned_cols=280 Identities=19% Similarity=0.254 Sum_probs=220.0
Q ss_pred ccccccccccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEE-EEEcC-CCCEEEEEeCC
Q 001548 723 NDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICS-ISFDR-DEDHFAAAGVS 800 (1056)
Q Consensus 723 ~~~l~gh~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~s-v~fsp-dg~~latg~~D 800 (1056)
.+.|.||..-|.+++.- .+.-.++++.|+++++|+-... ..+.++.+.+|.+.|.+ ++|.+ ++..+++|+.|
T Consensus 7 s~~l~gH~~DVr~v~~~---~~~~i~s~sRd~t~~vw~~~~~---~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D 80 (745)
T KOG0301|consen 7 SHELEGHKSDVRAVAVT---DGVCIISGSRDGTVKVWAKKGK---QYLETHAFEGPKGFIANSICYAESDKGRLVVGGMD 80 (745)
T ss_pred EEEeccCccchheeEec---CCeEEeecCCCCceeeeeccCc---ccccceecccCcceeeccceeccccCcceEeeccc
Confidence 35678898877766541 2233678999999999984322 23333456678888777 88875 55679999999
Q ss_pred CcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEe
Q 001548 801 KKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFS 880 (1056)
Q Consensus 801 g~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fs 880 (1056)
.+|.+|.... ........+|++.|.|++...+ + .++|||+|.++++|-. +++...+.+|+..||+|.+-
T Consensus 81 ~~i~v~~~~~-------~~P~~~LkgH~snVC~ls~~~~-~-~~iSgSWD~TakvW~~--~~l~~~l~gH~asVWAv~~l 149 (745)
T KOG0301|consen 81 TTIIVFKLSQ-------AEPLYTLKGHKSNVCSLSIGED-G-TLISGSWDSTAKVWRI--GELVYSLQGHTASVWAVASL 149 (745)
T ss_pred ceEEEEecCC-------CCchhhhhccccceeeeecCCc-C-ceEecccccceEEecc--hhhhcccCCcchheeeeeec
Confidence 9999999874 2233456789999999997664 3 4999999999999965 56777799999999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCC
Q 001548 881 QVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKA 959 (1056)
Q Consensus 881 p~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~ 959 (1056)
| +. .++|||.|++|++|.- ++++++|. |..-|..+++-+++. |++++.||.|++||+ ++.. +..+.||++-
T Consensus 150 ~-e~-~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~~--flScsNDg~Ir~w~~-~ge~-l~~~~ghtn~ 221 (745)
T KOG0301|consen 150 P-EN-TYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDSH--FLSCSNDGSIRLWDL-DGEV-LLEMHGHTNF 221 (745)
T ss_pred C-CC-cEEeccCcceeeeccC--CchhhhhccchhheeeeEEecCCC--eEeecCCceEEEEec-cCce-eeeeeccceE
Confidence 8 44 8999999999999987 67788887 677899999999974 889999999999999 4444 6788999999
Q ss_pred eEEEEE-cCCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcC
Q 001548 960 VSYVKF-LDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFD 1038 (1056)
Q Consensus 960 V~~l~f-s~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D 1038 (1056)
|++++. .+++.++|++.|++++||+.. .|.+.+.-.+-.+.+.+.. ++| -++++|.|
T Consensus 222 vYsis~~~~~~~Ivs~gEDrtlriW~~~----------e~~q~I~lPttsiWsa~~L-----------~Ng-DIvvg~SD 279 (745)
T KOG0301|consen 222 VYSISMALSDGLIVSTGEDRTLRIWKKD----------ECVQVITLPTTSIWSAKVL-----------LNG-DIVVGGSD 279 (745)
T ss_pred EEEEEecCCCCeEEEecCCceEEEeecC----------ceEEEEecCccceEEEEEe-----------eCC-CEEEeccC
Confidence 999995 488999999999999999975 5666665444455555522 233 34899999
Q ss_pred CcEEEEeCCCC
Q 001548 1039 FTTLSFRTSWG 1049 (1056)
Q Consensus 1039 ~~v~iW~v~~~ 1049 (1056)
+.|+||.++..
T Consensus 280 G~VrVfT~~k~ 290 (745)
T KOG0301|consen 280 GRVRVFTVDKD 290 (745)
T ss_pred ceEEEEEeccc
Confidence 99999998743
No 449
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.91 E-value=1.1e-22 Score=222.91 Aligned_cols=293 Identities=15% Similarity=0.175 Sum_probs=221.4
Q ss_pred ccccccccccceeeecccccCCCCcEEEECCCeEEEEEccCceEE-eEEEe----------eee--cCCCCCEEEEEEcC
Q 001548 723 NDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQ-GMLRT----------GEF--NNSANVICSISFDR 789 (1056)
Q Consensus 723 ~~~l~gh~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~-~~l~~----------~~l--~~h~~~V~sv~fsp 789 (1056)
...+..|.-.+.+++.. ......++++.|+++.-|+..++... ..+.+ ... .+|...|.+++.++
T Consensus 135 ~~~~~~H~~s~~~vals--~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~ 212 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALS--PDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSS 212 (479)
T ss_pred ceeeccccCcceEEEee--ccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcC
Confidence 45677788888877652 22335679999999999998766533 11111 112 28999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEec
Q 001548 790 DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIE 869 (1056)
Q Consensus 790 dg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~ 869 (1056)
||++||||+.|..|.||+..+. .....+.+|.+.|.+++|... .+.+++++.|++|++|++.....+.++-+
T Consensus 213 Dgkylatgg~d~~v~Iw~~~t~-------ehv~~~~ghr~~V~~L~fr~g-t~~lys~s~Drsvkvw~~~~~s~vetlyG 284 (479)
T KOG0299|consen 213 DGKYLATGGRDRHVQIWDCDTL-------EHVKVFKGHRGAVSSLAFRKG-TSELYSASADRSVKVWSIDQLSYVETLYG 284 (479)
T ss_pred CCcEEEecCCCceEEEecCccc-------chhhcccccccceeeeeeecC-ccceeeeecCCceEEEehhHhHHHHHHhC
Confidence 9999999999999999999862 233346789999999999887 78899999999999999998888999999
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEeCCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcc
Q 001548 870 HEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAP 949 (1056)
Q Consensus 870 H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~ 949 (1056)
|.+.|.+++... -.+.+.+|+.|+++++|++.....+....+.+.+-|++|-.+. .|++||+||.|.+|++-+.++.
T Consensus 285 Hqd~v~~IdaL~-reR~vtVGgrDrT~rlwKi~eesqlifrg~~~sidcv~~In~~--HfvsGSdnG~IaLWs~~KKkpl 361 (479)
T KOG0299|consen 285 HQDGVLGIDALS-RERCVTVGGRDRTVRLWKIPEESQLIFRGGEGSIDCVAFINDE--HFVSGSDNGSIALWSLLKKKPL 361 (479)
T ss_pred Cccceeeechhc-ccceEEeccccceeEEEeccccceeeeeCCCCCeeeEEEeccc--ceeeccCCceEEEeeecccCce
Confidence 999999999886 5666777779999999999665555555577799999998875 6999999999999999887653
Q ss_pred eEEecCC-----------CCCeEEEEEc-CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCC
Q 001548 950 WCVLAGH-----------EKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEH 1017 (1056)
Q Consensus 950 ~~~l~gH-----------~~~V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~ 1017 (1056)
...-.+| ..+|++|+.. ..++++|||.+|.||+|-+..+.. .-.++..+. -.+.|.+++
T Consensus 362 f~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r----~i~~l~~ls-~~GfVNsl~---- 432 (479)
T KOG0299|consen 362 FTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLR----AINLLYSLS-LVGFVNSLA---- 432 (479)
T ss_pred eEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCcc----ccceeeecc-cccEEEEEE----
Confidence 2222222 2389999988 567899999999999999984321 223444444 445565665
Q ss_pred cceeeEEeeCCCCEEEEEE-cCCcEEEE
Q 001548 1018 NLFPFTIFNLSDCWLLLVC-FDFTTLSF 1044 (1056)
Q Consensus 1018 ~~~~~~~~s~~g~~l~s~s-~D~~v~iW 1044 (1056)
|+++|++++++. ...++--|
T Consensus 433 -------f~~sgk~ivagiGkEhRlGRW 453 (479)
T KOG0299|consen 433 -------FSNSGKRIVAGIGKEHRLGRW 453 (479)
T ss_pred -------EccCCCEEEEeccccccccee
Confidence 667777665553 33333334
No 450
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.91 E-value=3.6e-24 Score=231.55 Aligned_cols=252 Identities=17% Similarity=0.240 Sum_probs=209.3
Q ss_pred ecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEE
Q 001548 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVK 854 (1056)
Q Consensus 775 l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~ 854 (1056)
+..|.+.|..+.|-++...|+|||.|..|++|+.... .........+..+.|+.+.|.++ +.+++++++|+.++
T Consensus 171 ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~-----k~~~~~tLaGs~g~it~~d~d~~-~~~~iAas~d~~~r 244 (459)
T KOG0288|consen 171 LDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGE-----KSELISTLAGSLGNITSIDFDSD-NKHVIAASNDKNLR 244 (459)
T ss_pred hhccccccceeEEccCcchhhhcchhhhhhhhhcccc-----hhhhhhhhhccCCCcceeeecCC-CceEEeecCCCcee
Confidence 5589999999999999999999999999999998641 12233344567888999999998 88999999999999
Q ss_pred EEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEeCCCCeEEEEEccCCCcEEEEEeC
Q 001548 855 LWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSA 934 (1056)
Q Consensus 855 lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~~~~~V~sv~fsp~~~~~lasGs~ 934 (1056)
+|++...+...++.+|.+.|+++.|.. ....+++|+.|.+||+||+....|..++...+.+..|+.++ ..+++|..
T Consensus 245 ~Wnvd~~r~~~TLsGHtdkVt~ak~~~-~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~cnDI~~~~---~~~~SgH~ 320 (459)
T KOG0288|consen 245 LWNVDSLRLRHTLSGHTDKVTAAKFKL-SHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQCNDIVCSI---SDVISGHF 320 (459)
T ss_pred eeeccchhhhhhhcccccceeeehhhc-cccceeeccccchhhhhhhhhhheeccccccccccceEecc---eeeeeccc
Confidence 999999999999999999999999997 44459999999999999999999999988877777777762 36899999
Q ss_pred CCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEE
Q 001548 935 DYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGIC 1013 (1056)
Q Consensus 935 Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls 1013 (1056)
|++|++||.|+... ......|. .|++|..+ ++..|.|++.|.++++.|++. .....+|..-. +..+
T Consensus 321 DkkvRfwD~Rs~~~-~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt--------~eI~~~~sA~g---~k~a 387 (459)
T KOG0288|consen 321 DKKVRFWDIRSADK-TRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRT--------KEIRQTFSAEG---FKCA 387 (459)
T ss_pred ccceEEEeccCCce-eeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeeccc--------ccEEEEeeccc---cccc
Confidence 99999999999886 45555544 89999999 666799999999999999983 34444444221 1111
Q ss_pred ecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCCeEEE
Q 001548 1014 RLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWGCLLL 1053 (1056)
Q Consensus 1014 ~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~~~~~ 1053 (1056)
.-++..+|||++.|+++||.|+.|.||++..+.+..
T Consensus 388 ----sDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~ 423 (459)
T KOG0288|consen 388 ----SDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEK 423 (459)
T ss_pred ----cccceeEECCCCceeeeccCCCcEEEEEccCceEEE
Confidence 126677899999999999999999999999987653
No 451
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.91 E-value=1e-22 Score=209.00 Aligned_cols=253 Identities=14% Similarity=0.206 Sum_probs=222.1
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001548 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1056)
Q Consensus 774 ~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V 853 (1056)
++.+|...|.+++|..+|..+|+|+.|+++++|++... .........+|.+.|-.++|+|.+..+|++++.|.+|
T Consensus 15 ~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~-----r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~i 89 (313)
T KOG1407|consen 15 ELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERD-----RFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTI 89 (313)
T ss_pred HhhhhhhcceEEEEcccCceeeecccCCceEEEEecch-----hhhhhhcccCCCcchhhheeCCCCCcceEEecCCceE
Confidence 56789999999999999999999999999999999852 2223345568999999999999989999999999999
Q ss_pred EEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEeCCCCeEEEEEccCCCcEEEEEe
Q 001548 854 KLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGS 933 (1056)
Q Consensus 854 ~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~~~~~V~sv~fsp~~~~~lasGs 933 (1056)
++||+++++++.... ....-.-+.|+| ++.+++.|+.|..|.+.|.|+.+.+...+....++-++|+.++. +++...
T Consensus 90 r~wd~r~~k~~~~i~-~~~eni~i~wsp-~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd-~Fflt~ 166 (313)
T KOG1407|consen 90 RIWDIRSGKCTARIE-TKGENINITWSP-DGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSND-LFFLTN 166 (313)
T ss_pred EEEEeccCcEEEEee-ccCcceEEEEcC-CCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCC-EEEEec
Confidence 999999999998876 445556778999 89999999999999999999999998888888899999996665 666677
Q ss_pred CCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEE
Q 001548 934 ADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGI 1012 (1056)
Q Consensus 934 ~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~l 1012 (1056)
..|+|.|......++ +..+.+|.....|+.|+ ++.+|++||.|-.+.+||+. .-.|++.+.-|.=+|..+
T Consensus 167 GlG~v~ILsypsLkp-v~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~--------ELiC~R~isRldwpVRTl 237 (313)
T KOG1407|consen 167 GLGCVEILSYPSLKP-VQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVD--------ELICERCISRLDWPVRTL 237 (313)
T ss_pred CCceEEEEecccccc-ccccccCCcceEEEEECCCCceEeeccccceeeccChh--------HhhhheeeccccCceEEE
Confidence 789999999987775 88999999999999999 67889999999999999998 567899999999899888
Q ss_pred EecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCCeEEEE
Q 001548 1013 CRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWGCLLLM 1054 (1056)
Q Consensus 1013 s~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~~~~~~ 1054 (1056)
+ ||.+|++|+++|-|.-|=|=.+.+|..++-
T Consensus 238 S-----------FS~dg~~lASaSEDh~IDIA~vetGd~~~e 268 (313)
T KOG1407|consen 238 S-----------FSHDGRMLASASEDHFIDIAEVETGDRVWE 268 (313)
T ss_pred E-----------eccCcceeeccCccceEEeEecccCCeEEE
Confidence 8 888999999999999998877777766653
No 452
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.91 E-value=3.7e-23 Score=228.41 Aligned_cols=245 Identities=22% Similarity=0.286 Sum_probs=200.0
Q ss_pred CCCCEEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEE
Q 001548 778 SANVICSISFDRDED-HFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLW 856 (1056)
Q Consensus 778 h~~~V~sv~fspdg~-~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lW 856 (1056)
..+.|.+++|+|... -+|+++ .-.+.||+..+. .....+...+..|++++|..+ |.+|++|+..|.|+|+
T Consensus 25 e~~~vssl~fsp~~P~d~aVt~-S~rvqly~~~~~-------~~~k~~srFk~~v~s~~fR~D-G~LlaaGD~sG~V~vf 95 (487)
T KOG0310|consen 25 EHNSVSSLCFSPKHPYDFAVTS-SVRVQLYSSVTR-------SVRKTFSRFKDVVYSVDFRSD-GRLLAAGDESGHVKVF 95 (487)
T ss_pred ccCcceeEecCCCCCCceEEec-ccEEEEEecchh-------hhhhhHHhhccceeEEEeecC-CeEEEccCCcCcEEEe
Confidence 346799999999654 355444 467999997641 112223345788999999998 9999999999999999
Q ss_pred EcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEEEeCC
Q 001548 857 DACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSAD 935 (1056)
Q Consensus 857 D~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~lasGs~D 935 (1056)
|..+...++.+.+|+.+|..+.|+|.+...|++|++|+.+++||+.+......+. |...|.|.+|+|...+++++||.|
T Consensus 96 D~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYD 175 (487)
T KOG0310|consen 96 DMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYD 175 (487)
T ss_pred ccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCC
Confidence 9877778899999999999999999999999999999999999999988643444 778899999999999999999999
Q ss_pred CeEEEEEcCCCCcceEEecCCCCCeEEEEEcCC-CEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEe
Q 001548 936 YRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDS-GTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICR 1014 (1056)
Q Consensus 936 g~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs~~-~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~ 1014 (1056)
|+|++||+|.....+..+ .|..+|..+.|.++ ..|+||+ .+.||+||+..+ +..+..+..|...|.+|.
T Consensus 176 g~vrl~DtR~~~~~v~el-nhg~pVe~vl~lpsgs~iasAg-Gn~vkVWDl~~G-------~qll~~~~~H~KtVTcL~- 245 (487)
T KOG0310|consen 176 GKVRLWDTRSLTSRVVEL-NHGCPVESVLALPSGSLIASAG-GNSVKVWDLTTG-------GQLLTSMFNHNKTVTCLR- 245 (487)
T ss_pred ceEEEEEeccCCceeEEe-cCCCceeeEEEcCCCCEEEEcC-CCeEEEEEecCC-------ceehhhhhcccceEEEEE-
Confidence 999999999986544444 58999999999855 6677776 578999999832 344555566999999998
Q ss_pred cCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCCeE
Q 001548 1015 LEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWGCL 1051 (1056)
Q Consensus 1015 ~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~~~ 1051 (1056)
...++..|+++|.|+.+++|++..-.+
T Consensus 246 ----------l~s~~~rLlS~sLD~~VKVfd~t~~Kv 272 (487)
T KOG0310|consen 246 ----------LASDSTRLLSGSLDRHVKVFDTTNYKV 272 (487)
T ss_pred ----------eecCCceEeecccccceEEEEccceEE
Confidence 444779999999999999999554433
No 453
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.91 E-value=1.7e-23 Score=213.02 Aligned_cols=287 Identities=13% Similarity=0.123 Sum_probs=235.4
Q ss_pred ccccccccceeeecccccCCCC--cEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCc
Q 001548 725 LLRDRENLFLAQQDQEIQNPTD--RLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKK 802 (1056)
Q Consensus 725 ~l~gh~~~v~~~~~~~~~~~~~--~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg~ 802 (1056)
+-.||...|..++|.. ..|++ .++++.|+.--+-+-++++-++++ .+|.+.|++...+.+....|+++.|=+
T Consensus 9 ~c~ghtrpvvdl~~s~-itp~g~flisa~kd~~pmlr~g~tgdwigtf-----eghkgavw~~~l~~na~~aasaaadft 82 (334)
T KOG0278|consen 9 TCHGHTRPVVDLAFSP-ITPDGYFLISASKDGKPMLRNGDTGDWIGTF-----EGHKGAVWSATLNKNATRAASAAADFT 82 (334)
T ss_pred EEcCCCcceeEEeccC-CCCCceEEEEeccCCCchhccCCCCCcEEee-----eccCcceeeeecCchhhhhhhhcccch
Confidence 4568999999888833 23443 458888887766555566555554 499999999999999999999999999
Q ss_pred EEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCc-eEEEEecCCCcEEEEEEec
Q 001548 803 IKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQ-TVSHYIEHEKRAWSVDFSQ 881 (1056)
Q Consensus 803 I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~-~v~~~~~H~~~V~sv~fsp 881 (1056)
.+|||.-+. .....+.|+-.|..++|+.+ .++|++|+.+..+||||++..+ +..++.+|.+.|..+-|..
T Consensus 83 akvw~a~tg--------delhsf~hkhivk~~af~~d-s~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~ 153 (334)
T KOG0278|consen 83 AKVWDAVTG--------DELHSFEHKHIVKAVAFSQD-SNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCH 153 (334)
T ss_pred hhhhhhhhh--------hhhhhhhhhheeeeEEeccc-chhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEec
Confidence 999997652 11234578889999999998 8899999999999999998754 6788999999999999998
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCceeEEEeCCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeE
Q 001548 882 VHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVS 961 (1056)
Q Consensus 882 ~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~ 961 (1056)
....|+|.++|++|++||.+++..++++..+.+|+++.++++|. +++-...+.|.+||..+... +..+.. ...|.
T Consensus 154 -eD~~iLSSadd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~--ilTia~gssV~Fwdaksf~~-lKs~k~-P~nV~ 228 (334)
T KOG0278|consen 154 -EDKCILSSADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGR--ILTIAYGSSVKFWDAKSFGL-LKSYKM-PCNVE 228 (334)
T ss_pred -cCceEEeeccCCceEEEEeccCcEEEEEecCCCCcceeeccCCC--EEEEecCceeEEeccccccc-eeeccC-ccccc
Confidence 66778888999999999999999999999999999999999996 44455677899999988765 333332 34577
Q ss_pred EEEEcC-CCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEe-cCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCC
Q 001548 962 YVKFLD-SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTF-SGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDF 1039 (1056)
Q Consensus 962 ~l~fs~-~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~-~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~ 1039 (1056)
+...+| .+.++.|+.|..++.||.. ++..+..+ +||.++|.++. |+|+|---+++|-|+
T Consensus 229 SASL~P~k~~fVaGged~~~~kfDy~--------TgeEi~~~nkgh~gpVhcVr-----------FSPdGE~yAsGSEDG 289 (334)
T KOG0278|consen 229 SASLHPKKEFFVAGGEDFKVYKFDYN--------TGEEIGSYNKGHFGPVHCVR-----------FSPDGELYASGSEDG 289 (334)
T ss_pred cccccCCCceEEecCcceEEEEEecc--------CCceeeecccCCCCceEEEE-----------ECCCCceeeccCCCc
Confidence 777774 4668899999999999998 55566666 89999999998 899998889999999
Q ss_pred cEEEEeCCCCe
Q 001548 1040 TTLSFRTSWGC 1050 (1056)
Q Consensus 1040 ~v~iW~v~~~~ 1050 (1056)
++++|.+-.+.
T Consensus 290 TirlWQt~~~~ 300 (334)
T KOG0278|consen 290 TIRLWQTTPGK 300 (334)
T ss_pred eEEEEEecCCC
Confidence 99999976543
No 454
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=1.4e-24 Score=234.95 Aligned_cols=179 Identities=17% Similarity=0.190 Sum_probs=148.7
Q ss_pred CcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccc
Q 001548 304 LRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESA 383 (1056)
Q Consensus 304 ~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~ 383 (1056)
..+|||+.||+|--.|.+-|+.-+. .+..|+..|+.||-|||++|||.||||.+||+|+..|+|||+|||++++-.-+
T Consensus 426 yFVMEyvnGGDLMyhiQQ~GkFKEp-~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~- 503 (683)
T KOG0696|consen 426 YFVMEYVNGGDLMYHIQQVGKFKEP-VAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD- 503 (683)
T ss_pred eeEEEEecCchhhhHHHHhcccCCc-hhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccC-
Confidence 3489999999999999888876555 89999999999999999999999999999999999999999999999873310
Q ss_pred cCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccc
Q 001548 384 SLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHT 463 (1056)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~ 463 (1056)
T Consensus 504 -------------------------------------------------------------------------------- 503 (683)
T KOG0696|consen 504 -------------------------------------------------------------------------------- 503 (683)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHH
Q 001548 464 NAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMS 540 (1056)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~ 540 (1056)
.....+.+|||-|+|||++.-.+|+.++|+||+||+|||||.| |+++++......
T Consensus 504 ----------------------~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~a 561 (683)
T KOG0696|consen 504 ----------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQA 561 (683)
T ss_pred ----------------------CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence 0001178999999999999999999999999999999999975 777665554444
Q ss_pred hhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCH-----HHHhhhhhhhhh
Q 001548 541 DLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT-----REILQSEVTNEF 588 (1056)
Q Consensus 541 ~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~-----~eil~~~~~~~~ 588 (1056)
+..+..-- ..+.+.+..++|..+|.+.|.+|... ++|-.||||...
T Consensus 562 I~ehnvsy--PKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~i 612 (683)
T KOG0696|consen 562 IMEHNVSY--PKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRI 612 (683)
T ss_pred HHHccCcC--cccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhc
Confidence 44444322 23457888899999999999999765 789999999765
No 455
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.91 E-value=8.2e-22 Score=208.33 Aligned_cols=248 Identities=17% Similarity=0.245 Sum_probs=204.9
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEEC--CCcEE
Q 001548 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADY--DGVVK 854 (1056)
Q Consensus 777 ~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~--Dg~V~ 854 (1056)
.-.+.|+++.|+++|.++++++.|.+++|||... .........++-.|..++|... .+.++.++. |.+||
T Consensus 12 ~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~-------g~~~~ti~skkyG~~~~~Fth~-~~~~i~sStk~d~tIr 83 (311)
T KOG1446|consen 12 ETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLS-------GKQVKTINSKKYGVDLACFTHH-SNTVIHSSTKEDDTIR 83 (311)
T ss_pred cCCCceeEEEecCCCCEEEEecCCCeEEEEEcCC-------CceeeEeecccccccEEEEecC-CceEEEccCCCCCceE
Confidence 4577899999999999999999999999999874 2333344455667888888766 556666665 89999
Q ss_pred EEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEeCCCCeEEEEEccCCCcEEEEEeC
Q 001548 855 LWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSA 934 (1056)
Q Consensus 855 lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~~~~~V~sv~fsp~~~~~lasGs~ 934 (1056)
+-++.+.+.++-|.||...|++++.+| -+..|+|+|.|++|++||+|..+|...+...+ -..++|+|+|- ++|+|..
T Consensus 84 yLsl~dNkylRYF~GH~~~V~sL~~sP-~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~-~pi~AfDp~GL-ifA~~~~ 160 (311)
T KOG1446|consen 84 YLSLHDNKYLRYFPGHKKRVNSLSVSP-KDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSG-RPIAAFDPEGL-IFALANG 160 (311)
T ss_pred EEEeecCceEEEcCCCCceEEEEEecC-CCCeEEecccCCeEEeeEecCCCCceEEecCC-CcceeECCCCc-EEEEecC
Confidence 999999999999999999999999999 55899999999999999999988877666443 34578999995 8888888
Q ss_pred CCeEEEEEcCCC-CcceEEec---CCCCCeEEEEEc-CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcE
Q 001548 935 DYRTYCYDLRNA-RAPWCVLA---GHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEK 1009 (1056)
Q Consensus 935 Dg~V~lwDlr~~-~~~~~~l~---gH~~~V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~V 1009 (1056)
...|++||+|+. +.|..++. +-......|.|+ +|+.|+-+...+.+.+.|-- .|..+.+|.+|.+.-
T Consensus 161 ~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf--------~G~~~~tfs~~~~~~ 232 (311)
T KOG1446|consen 161 SELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAF--------DGTVKSTFSGYPNAG 232 (311)
T ss_pred CCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEcc--------CCcEeeeEeeccCCC
Confidence 889999999987 44666654 336678999999 77888888899999999976 567888999887764
Q ss_pred -EEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCCeEE
Q 001548 1010 -VGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWGCLL 1052 (1056)
Q Consensus 1010 -v~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~~~~ 1052 (1056)
..+. .+++|+++++++++.|+++.+|++..|.-+
T Consensus 233 ~~~~~---------a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v 267 (311)
T KOG1446|consen 233 NLPLS---------ATFTPDSKFVLSGSDDGTIHVWNLETGKKV 267 (311)
T ss_pred Cccee---------EEECCCCcEEEEecCCCcEEEEEcCCCcEe
Confidence 2222 349999999999999999999999888654
No 456
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.91 E-value=2.8e-24 Score=240.00 Aligned_cols=206 Identities=20% Similarity=0.170 Sum_probs=150.3
Q ss_pred hhhhccC-CCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Q 001548 263 AMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVAL 341 (1056)
Q Consensus 263 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~g 341 (1056)
..++... .||+++.+......+.. ...+|+|+.|++|.+++...+ .+++..++.++.|++.|
T Consensus 55 ~~~l~~~~~~~~i~~~~~~~~~~~~----------------~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~ql~~~ 117 (288)
T cd05583 55 RQVLEAVRRCPFLVTLHYAFQTDTK----------------LHLILDYVNGGELFTHLYQRE-HFTESEVRVYIAEIVLA 117 (288)
T ss_pred HHHHHhccCCcchhhhheeeecCCE----------------EEEEEecCCCCcHHHHHhhcC-CcCHHHHHHHHHHHHHH
Confidence 3345555 58888876544221111 114889999999999997654 46777899999999999
Q ss_pred HHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 342 VDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 342 L~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
|.|||+.|++||||||+||+++.++.++++|||+++.......
T Consensus 118 l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~------------------------------------- 160 (288)
T cd05583 118 LDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEE------------------------------------- 160 (288)
T ss_pred HHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccccc-------------------------------------
Confidence 9999999999999999999999999999999998765431000
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
.......|+..|+||
T Consensus 161 -----------------------------------------------------------------~~~~~~~~~~~y~aP 175 (288)
T cd05583 161 -----------------------------------------------------------------ERAYSFCGTIEYMAP 175 (288)
T ss_pred -----------------------------------------------------------------cccccccCCccccCH
Confidence 000023577889999
Q ss_pred ccccCCC--CCccchhHHHHHHHHHHhCCCCcHH------HHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCC
Q 001548 502 EELSGGV--CTTSSNIYSLGVLFFELFGRFDSER------ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSR 573 (1056)
Q Consensus 502 E~l~~~~--~t~~sDIwSLGvlL~eLlt~f~~~~------~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~R 573 (1056)
|.+.+.. .+.++|||||||++|||+++..++. ........+.. ..++.....++.+.+|+.+||+.||++|
T Consensus 176 E~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~R 254 (288)
T cd05583 176 EVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILK-SKPPFPKTMSAEARDFIQKLLEKDPKKR 254 (288)
T ss_pred HHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHc-cCCCCCcccCHHHHHHHHHHhcCCHhhc
Confidence 9987754 7889999999999999998743321 11111111111 1233344567889999999999999999
Q ss_pred CC---HHHHhhhhhhhhh
Q 001548 574 PT---TREILQSEVTNEF 588 (1056)
Q Consensus 574 pt---~~eil~~~~~~~~ 588 (1056)
|| +.++|+||||...
T Consensus 255 ~t~~~~~~~l~~~~~~~~ 272 (288)
T cd05583 255 LGANGADEIKNHPFFQGI 272 (288)
T ss_pred cCcchHHHHhcCcccccC
Confidence 98 5678999999775
No 457
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.91 E-value=2.8e-23 Score=211.25 Aligned_cols=254 Identities=19% Similarity=0.222 Sum_probs=201.6
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEe-cCCCCEEEEEECCCcEE
Q 001548 776 NNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWN-NYIKNYLASADYDGVVK 854 (1056)
Q Consensus 776 ~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~-~~~~~~LaSgs~Dg~V~ 854 (1056)
..|.+.|..+..+-.|+.||||+.|++||||..... ..........+|.++|..++|. |.-+.+||||++||.|.
T Consensus 8 t~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n----~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVI 83 (299)
T KOG1332|consen 8 TQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNN----GQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVI 83 (299)
T ss_pred hhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCC----CCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEE
Confidence 378888888888888999999999999999998741 1223445667999999999995 44499999999999999
Q ss_pred EEEcCCCc--eEEEEecCCCcEEEEEEecC-CCCEEEEEeCCCcEEEEECCCC-c-eeE--EEeCCCCeEEEEEccC---
Q 001548 855 LWDACTGQ--TVSHYIEHEKRAWSVDFSQV-HPTKLASGSDDCSVKLWNINEK-N-SLA--TIKNIANVCCVQFSAH--- 924 (1056)
Q Consensus 855 lWD~~t~~--~v~~~~~H~~~V~sv~fsp~-d~~~laSgs~Dg~V~IWDlr~~-~-~~~--~~~~~~~V~sv~fsp~--- 924 (1056)
||.-..++ ....+..|...|++|+|.|. -+-.|++++.||+|.|.+.++. . ... .+.|.-.|++|+|.|.
T Consensus 84 iWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~ 163 (299)
T KOG1332|consen 84 IWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAP 163 (299)
T ss_pred EEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCC
Confidence 99998875 44566789999999999984 2456899999999999998865 2 111 2237788999999997
Q ss_pred CC----------cEEEEEeCCCeEEEEEcCCCCc-ceEEecCCCCCeEEEEEcC-----CCEEEEEECCCeEEEEECCCC
Q 001548 925 SS----------HLLAFGSADYRTYCYDLRNARA-PWCVLAGHEKAVSYVKFLD-----SGTLVTASTDNKLKLWDLKRT 988 (1056)
Q Consensus 925 ~~----------~~lasGs~Dg~V~lwDlr~~~~-~~~~l~gH~~~V~~l~fs~-----~~~L~SgS~Dg~IkiWdl~~~ 988 (1056)
|. .-|++|+.|+.|+||+..+..- .-.+|.+|.+.|..++|.| ..+|+|||.||+|.||-.+..
T Consensus 164 g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e 243 (299)
T KOG1332|consen 164 GSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEE 243 (299)
T ss_pred ccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCc
Confidence 31 3599999999999999988532 2245899999999999974 346999999999999988732
Q ss_pred CCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCC
Q 001548 989 SHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWG 1049 (1056)
Q Consensus 989 ~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~ 1049 (1056)
..+-+.+++ ......+..++ ||+.|..|++++.|.++.+|.-+..
T Consensus 244 --~e~wk~tll---~~f~~~~w~vS-----------WS~sGn~LaVs~GdNkvtlwke~~~ 288 (299)
T KOG1332|consen 244 --YEPWKKTLL---EEFPDVVWRVS-----------WSLSGNILAVSGGDNKVTLWKENVD 288 (299)
T ss_pred --cCccccccc---ccCCcceEEEE-----------EeccccEEEEecCCcEEEEEEeCCC
Confidence 222233333 33556677777 9999999999999999999986543
No 458
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.91 E-value=1.4e-24 Score=254.37 Aligned_cols=236 Identities=17% Similarity=0.204 Sum_probs=157.5
Q ss_pred ceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCC
Q 001548 224 GIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGG 303 (1056)
Q Consensus 224 Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (1056)
++||+|...++ +++++..+.+-.... .+++. -+..+..|||||+.--.-. + -+.-+
T Consensus 524 t~Vf~G~ye~R------~VAVKrll~e~~~~A-~rEi~--lL~eSD~H~NviRyyc~E~-----d----~qF~Y------ 579 (903)
T KOG1027|consen 524 TVVFRGVYEGR------EVAVKRLLEEFFDFA-QREIQ--LLQESDEHPNVIRYYCSEQ-----D----RQFLY------ 579 (903)
T ss_pred cEEEEEeeCCc------eehHHHHhhHhHHHH-HHHHH--HHHhccCCCceEEEEeecc-----C----CceEE------
Confidence 68999998422 233333333222221 22222 2456679999997322211 1 11111
Q ss_pred CcccccCCCCCHHHHHHhcCCCCCH---HHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccC-----CcEEEeCcch
Q 001548 304 LRQGSSDHGVNLREWLNARGHKGKR---IECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS-----NQVKYIGPII 375 (1056)
Q Consensus 304 ~~~~~~~~GgsL~~~l~~~~~~~~~---~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~-----~~vkl~Dfgl 375 (1056)
+..|.|. .+|.++++..+...+. ...+.++.|++.||.+||+-+||||||||.||||+.. ..++|+|||+
T Consensus 580 -IalELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfgl 657 (903)
T KOG1027|consen 580 -IALELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGL 657 (903)
T ss_pred -EEehHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccccc
Confidence 1344444 5999999874222111 3568899999999999999999999999999999863 3589999999
Q ss_pred hhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCC
Q 001548 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1056)
Q Consensus 376 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~ 455 (1056)
++.+...-
T Consensus 658 sKkl~~~~------------------------------------------------------------------------ 665 (903)
T KOG1027|consen 658 SKKLAGGK------------------------------------------------------------------------ 665 (903)
T ss_pred ccccCCCc------------------------------------------------------------------------
Confidence 98876200
Q ss_pred CCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCC----CCc
Q 001548 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR----FDS 531 (1056)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~----f~~ 531 (1056)
..........||..|+|||++....-+.++|||||||++|+.+++ |..
T Consensus 666 ----------------------------sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd 717 (903)
T KOG1027|consen 666 ----------------------------SSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGD 717 (903)
T ss_pred ----------------------------chhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCc
Confidence 001112356799999999999998888899999999999999975 443
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCh--hHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001548 532 ERALAAAMSDLRDRILPPSFLSENP--KEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1056)
Q Consensus 532 ~~~~~~~~~~~~~~~lp~~~~~~~~--~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~ 588 (1056)
.- .....++.+..-- ..+...+ ...+||.+||+++|..||+|.++|.||+|-..
T Consensus 718 ~~--~R~~NIl~~~~~L-~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ 773 (903)
T KOG1027|consen 718 SL--ERQANILTGNYTL-VHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDS 773 (903)
T ss_pred hH--HhhhhhhcCccce-eeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence 32 2222333322111 1111122 67799999999999999999999999999764
No 459
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.91 E-value=1.5e-22 Score=242.28 Aligned_cols=284 Identities=17% Similarity=0.176 Sum_probs=220.8
Q ss_pred CCCCcE--EEE--CCCeEEEEEccCce----EEeE-EE--eeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCC
Q 001548 743 NPTDRL--GAF--FDGLCKYARYSKFE----VQGM-LR--TGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNAL 811 (1056)
Q Consensus 743 ~~~~~l--s~s--~D~~ikiw~~~~~~----~~~~-l~--~~~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~ 811 (1056)
+|++.. ++. .|+.+.+|+.+..- .... +. -.....|.+.|+|+.|+|||.+||+|+.|+.|.||+....
T Consensus 22 ~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~ 101 (942)
T KOG0973|consen 22 HPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEI 101 (942)
T ss_pred cCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcceEEEeeeccc
Confidence 555554 445 78888899865321 1111 11 1245689999999999999999999999999999998831
Q ss_pred -----C------CCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEe
Q 001548 812 -----F------NDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFS 880 (1056)
Q Consensus 812 -----~------~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fs 880 (1056)
+ .............+|.+.|.+++|+|+ +.+||+++.|++|.|||..+..+++.+.+|.+.|-.+.|.
T Consensus 102 ~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~-~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~D 180 (942)
T KOG0973|consen 102 GSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPD-DSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWD 180 (942)
T ss_pred CCcccccccccccccceeeEEEEEecCCCccceeccCCC-ccEEEEecccceEEEEccccceeeeeeecccccccceEEC
Confidence 1 111122344566789999999999997 9999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCceeEEEeC-------CCCeEEEEEccCCCcEEEEEeC----CCeEEEEEcCCCCcc
Q 001548 881 QVHPTKLASGSDDCSVKLWNINEKNSLATIKN-------IANVCCVQFSAHSSHLLAFGSA----DYRTYCYDLRNARAP 949 (1056)
Q Consensus 881 p~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~~-------~~~V~sv~fsp~~~~~lasGs~----Dg~V~lwDlr~~~~~ 949 (1056)
| -|++|||-++|++|+||++.+-...+.+.. ..-+.-+.|+|||. +|++... -.++.|.+-.+.+.
T Consensus 181 P-~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~-~las~nA~n~~~~~~~IieR~tWk~- 257 (942)
T KOG0973|consen 181 P-IGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGH-HLASPNAVNGGKSTIAIIERGTWKV- 257 (942)
T ss_pred C-ccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcC-eecchhhccCCcceeEEEecCCcee-
Confidence 9 899999999999999999888777776652 23478899999997 7776642 34678887654443
Q ss_pred eEEecCCCCCeEEEEEcC------CC------------EEEEEECCCeEEEEECCCCCCCCCCCCceeEEec-CCCCcEE
Q 001548 950 WCVLAGHEKAVSYVKFLD------SG------------TLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFS-GHTNEKV 1010 (1056)
Q Consensus 950 ~~~l~gH~~~V~~l~fs~------~~------------~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~-gH~~~Vv 1010 (1056)
-..|.||.+++.++.|+| .. .+|+||.|++|.||.... .+++.... =....|+
T Consensus 258 ~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~--------~RPl~vi~~lf~~SI~ 329 (942)
T KOG0973|consen 258 DKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTAL--------PRPLFVIHNLFNKSIV 329 (942)
T ss_pred eeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCC--------CCchhhhhhhhcCcee
Confidence 467899999999999973 22 588999999999999862 23333322 1234678
Q ss_pred EEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCC
Q 001548 1011 GICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWG 1049 (1056)
Q Consensus 1011 ~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~ 1049 (1056)
.++ |+|||.-|..||.|++|.+...+-.
T Consensus 330 Dms-----------WspdG~~LfacS~DGtV~~i~Fee~ 357 (942)
T KOG0973|consen 330 DMS-----------WSPDGFSLFACSLDGTVALIHFEEK 357 (942)
T ss_pred eee-----------EcCCCCeEEEEecCCeEEEEEcchH
Confidence 888 9999999999999999998876543
No 460
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=2.3e-24 Score=238.89 Aligned_cols=181 Identities=16% Similarity=0.155 Sum_probs=149.8
Q ss_pred cccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhccccccc
Q 001548 305 RQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESAS 384 (1056)
Q Consensus 305 ~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~ 384 (1056)
-+||-|-||.|...|+.+|.+ +...++.|+..+++|++|||++|||.|||||+|++|+.+|-+||.|||.|+.+....
T Consensus 497 mLmEaClGGElWTiLrdRg~F-dd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~- 574 (732)
T KOG0614|consen 497 MLMEACLGGELWTILRDRGSF-DDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR- 574 (732)
T ss_pred hhHHhhcCchhhhhhhhcCCc-ccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCC-
Confidence 378999999999999988864 555999999999999999999999999999999999999999999999998876210
Q ss_pred CCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCccccccc
Q 001548 385 LDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTN 464 (1056)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~ 464 (1056)
T Consensus 575 -------------------------------------------------------------------------------- 574 (732)
T KOG0614|consen 575 -------------------------------------------------------------------------------- 574 (732)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHh
Q 001548 465 AGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSD 541 (1056)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~ 541 (1056)
.--+.||||.|.|||++.....+.++|+||||+++||||+| |.+-++...+..+
T Consensus 575 -----------------------KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~I 631 (732)
T KOG0614|consen 575 -----------------------KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLI 631 (732)
T ss_pred -----------------------ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHH
Confidence 01178999999999999999999999999999999999986 6665666665555
Q ss_pred hccCCCCCCCCCCChhHHHHHHhccccCCCCCCC-----HHHHhhhhhhhhhhh
Q 001548 542 LRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT-----TREILQSEVTNEFQE 590 (1056)
Q Consensus 542 ~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt-----~~eil~~~~~~~~~~ 590 (1056)
++.-..-.-+........+|++++...+|..|.. +.+|.+|-||.+...
T Consensus 632 LkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdw 685 (732)
T KOG0614|consen 632 LKGIDKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDW 685 (732)
T ss_pred HhhhhhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCCh
Confidence 5543211111233555679999999999999986 799999999987643
No 461
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.90 E-value=4.3e-23 Score=227.83 Aligned_cols=224 Identities=15% Similarity=0.255 Sum_probs=177.1
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001548 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1056)
Q Consensus 774 ~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V 853 (1056)
.+.+|+..|++++++|.|..|+|||.|.+|++||+.... ................|.++.|+++ ++.|++.+.....
T Consensus 162 ~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMd--as~~~fr~l~P~E~h~i~sl~ys~T-g~~iLvvsg~aqa 238 (641)
T KOG0772|consen 162 QLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMD--ASMRSFRQLQPCETHQINSLQYSVT-GDQILVVSGSAQA 238 (641)
T ss_pred eccCCceEEEEeeecCCCceeeeccccceEEEEeccccc--ccchhhhccCcccccccceeeecCC-CCeEEEEecCcce
Confidence 467999999999999999999999999999999998631 1111222233344667999999998 7777777778899
Q ss_pred EEEEcCCCceEE------------EEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCc-eeEEEeCC------C
Q 001548 854 KLWDACTGQTVS------------HYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKN-SLATIKNI------A 914 (1056)
Q Consensus 854 ~lWD~~t~~~v~------------~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~-~~~~~~~~------~ 914 (1056)
+|+|-.....+. .-++|...++|.+|+|.+...|+||+.||+++|||+...+ ..+.|++. -
T Consensus 239 kl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv 318 (641)
T KOG0772|consen 239 KLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRV 318 (641)
T ss_pred eEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCccc
Confidence 999964322221 2247999999999999888899999999999999998654 45556532 3
Q ss_pred CeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCc--ceEEecCCCC--CeEEEEEc-CCCEEEEEECCCeEEEEECCCCC
Q 001548 915 NVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARA--PWCVLAGHEK--AVSYVKFL-DSGTLVTASTDNKLKLWDLKRTS 989 (1056)
Q Consensus 915 ~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~--~~~~l~gH~~--~V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~ 989 (1056)
++++++|+|++. ++|+|+.||.|.+||.++... ..++-.+|.. .|++|.|+ ++++|+|-+.|+++|+||++...
T Consensus 319 ~~tsC~~nrdg~-~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~k 397 (641)
T KOG0772|consen 319 PVTSCAWNRDGK-LIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFK 397 (641)
T ss_pred CceeeecCCCcc-hhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccc
Confidence 589999999997 799999999999999876543 3456678988 89999999 89999999999999999999643
Q ss_pred CCCCCCCceeEEecCCCCc
Q 001548 990 HTGPSTNACSLTFSGHTNE 1008 (1056)
Q Consensus 990 ~~~~~~~~~~~~~~gH~~~ 1008 (1056)
+++.++.|-.+.
T Consensus 398 -------kpL~~~tgL~t~ 409 (641)
T KOG0772|consen 398 -------KPLNVRTGLPTP 409 (641)
T ss_pred -------cchhhhcCCCcc
Confidence 455555554443
No 462
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.90 E-value=7.3e-24 Score=218.88 Aligned_cols=160 Identities=21% Similarity=0.195 Sum_probs=124.4
Q ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCch
Q 001548 313 VNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSEN 392 (1056)
Q Consensus 313 gsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~ 392 (1056)
|+|.++|+.++..+++.+++.|++||+.||.|||+++ ||+|||++.++.+|+ ||+++....
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~----------- 61 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP----------- 61 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc-----------
Confidence 6899999887777899999999999999999999999 999999999999999 998765331
Q ss_pred hhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCC
Q 001548 393 YRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSK 472 (1056)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~ 472 (1056)
T Consensus 62 -------------------------------------------------------------------------------- 61 (176)
T smart00750 62 -------------------------------------------------------------------------------- 61 (176)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCCCCc---HHHHHHHHHhhccCCCCC
Q 001548 473 SSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDS---ERALAAAMSDLRDRILPP 549 (1056)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~f~~---~~~~~~~~~~~~~~~lp~ 549 (1056)
....||+.|+|||++.+..++.++|||||||++|||+++..+ ..........+.....+.
T Consensus 62 -----------------~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 124 (176)
T smart00750 62 -----------------EQSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPAD 124 (176)
T ss_pred -----------------ccCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccC
Confidence 012478899999999999999999999999999999986322 222222222222111111
Q ss_pred ------CCCCCCh--hHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001548 550 ------SFLSENP--KEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1056)
Q Consensus 550 ------~~~~~~~--~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~ 588 (1056)
....... .+.+|+.+||..||.+||++.++++|+|+...
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 125 DPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred CccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 1111122 58899999999999999999999999998753
No 463
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.90 E-value=5.1e-22 Score=204.39 Aligned_cols=254 Identities=16% Similarity=0.179 Sum_probs=210.5
Q ss_pred ecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEE
Q 001548 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVK 854 (1056)
Q Consensus 775 l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~ 854 (1056)
+.+|.-+++-+.|+.+|++|++|+.|.++.||--.. ....-...+|.+.|.|+..+.+ ...++||+.|.+++
T Consensus 6 l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~n-------GerlGty~GHtGavW~~Did~~-s~~liTGSAD~t~k 77 (327)
T KOG0643|consen 6 LQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLN-------GERLGTYDGHTGAVWCCDIDWD-SKHLITGSADQTAK 77 (327)
T ss_pred cccCccccceEEecCCCcEEEEecCCCCceEEEecC-------CceeeeecCCCceEEEEEecCC-cceeeeccccceeE
Confidence 458999999999999999999999999999997532 2334456799999999998877 78999999999999
Q ss_pred EEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCC-----CcEEEEECCC-------CceeEEEe-CCCCeEEEEE
Q 001548 855 LWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDD-----CSVKLWNINE-------KNSLATIK-NIANVCCVQF 921 (1056)
Q Consensus 855 lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~D-----g~V~IWDlr~-------~~~~~~~~-~~~~V~sv~f 921 (1056)
|||+.+|+++..++ -...|..+.|++ ++++++.+.++ +.|.++|++. ..++..+. +.+.++.+-|
T Consensus 78 LWDv~tGk~la~~k-~~~~Vk~~~F~~-~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~W 155 (327)
T KOG0643|consen 78 LWDVETGKQLATWK-TNSPVKRVDFSF-GGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALW 155 (327)
T ss_pred EEEcCCCcEEEEee-cCCeeEEEeecc-CCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeee
Confidence 99999999999997 678999999999 88888777654 5799999993 44455543 6688999999
Q ss_pred ccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEECCCCCC----------
Q 001548 922 SAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSH---------- 990 (1056)
Q Consensus 922 sp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~~---------- 990 (1056)
.|.+. .+++|..||.|..||++++...+..-..|...|+.+.++ +..+++|+|.|.+-++||+..-..
T Consensus 156 g~l~~-~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te~Pv 234 (327)
T KOG0643|consen 156 GPLGE-TIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTTERPV 234 (327)
T ss_pred cccCC-EEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeeecccc
Confidence 99997 888899999999999999988777778899999999999 677899999999999999874110
Q ss_pred ------C---------C----------CCCC------------ceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEE
Q 001548 991 ------T---------G----------PSTN------------ACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLL 1033 (1056)
Q Consensus 991 ------~---------~----------~~~~------------~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~ 1033 (1056)
+ | ...+ +.+..++||-+++.+++ ++|+|+-.+
T Consensus 235 N~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvA-----------fhPdGksYs 303 (327)
T KOG0643|consen 235 NTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVA-----------FHPDGKSYS 303 (327)
T ss_pred cceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeE-----------ECCCCcccc
Confidence 0 0 0011 12344568888887777 899999999
Q ss_pred EEEcCCcEEEEeCCCCe
Q 001548 1034 LVCFDFTTLSFRTSWGC 1050 (1056)
Q Consensus 1034 s~s~D~~v~iW~v~~~~ 1050 (1056)
+||-|+.|++...+..+
T Consensus 304 SGGEDG~VR~h~Fd~~Y 320 (327)
T KOG0643|consen 304 SGGEDGYVRLHHFDSNY 320 (327)
T ss_pred cCCCCceEEEEEeccch
Confidence 99999999987766543
No 464
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.90 E-value=1.3e-23 Score=239.77 Aligned_cols=206 Identities=18% Similarity=0.244 Sum_probs=148.5
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....|||++.+.......... ...+++++ |++|.++++.. .++...+..++.||+.||
T Consensus 60 ~~~l~~l~hpniv~~~~~~~~~~~~---------------~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~ql~~aL 121 (328)
T cd07856 60 LKLLKHLRHENIISLSDIFISPLED---------------IYFVTELL-GTDLHRLLTSR--PLEKQFIQYFLYQILRGL 121 (328)
T ss_pred HHHHHhcCCCCeeeEeeeEecCCCc---------------EEEEeehh-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHH
Confidence 4567778899998755442211100 11366666 67999988643 356668889999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 422 (1056)
.|||++||+||||||+||+++.++.+|++|||+++....
T Consensus 122 ~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~----------------------------------------- 160 (328)
T cd07856 122 KYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDP----------------------------------------- 160 (328)
T ss_pred HHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCC-----------------------------------------
Confidence 999999999999999999999999999999998754220
Q ss_pred ccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcc
Q 001548 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1056)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 502 (1056)
......+++.|+|||
T Consensus 161 -----------------------------------------------------------------~~~~~~~~~~y~aPE 175 (328)
T cd07856 161 -----------------------------------------------------------------QMTGYVSTRYYRAPE 175 (328)
T ss_pred -----------------------------------------------------------------CcCCCcccccccCce
Confidence 000235677899999
Q ss_pred cccC-CCCCccchhHHHHHHHHHHhCC---CCcHHHHHH---HH-----------------------HhhccC-CCC--C
Q 001548 503 ELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERALAA---AM-----------------------SDLRDR-ILP--P 549 (1056)
Q Consensus 503 ~l~~-~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~---~~-----------------------~~~~~~-~lp--~ 549 (1056)
.+.+ ..++.++|||||||++|+|+++ |........ .. ..+... ..| .
T Consensus 176 ~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (328)
T cd07856 176 IMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSE 255 (328)
T ss_pred eeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHH
Confidence 9876 5689999999999999999986 322211100 00 001000 111 1
Q ss_pred CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhhhc
Q 001548 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (1056)
Q Consensus 550 ~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~~~ 592 (1056)
.....++.+.+||.+||+++|.+|||+.+++.||||.....+.
T Consensus 256 ~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~~ 298 (328)
T cd07856 256 KFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPT 298 (328)
T ss_pred HcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCCc
Confidence 1234567899999999999999999999999999998765543
No 465
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.90 E-value=1.4e-23 Score=226.06 Aligned_cols=201 Identities=21% Similarity=0.265 Sum_probs=153.9
Q ss_pred hhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Q 001548 264 MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVD 343 (1056)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ 343 (1056)
..+....|++++.+......+.. ....++++++++|.+++..... ++...+..++.|++.+|.
T Consensus 39 ~~~~~l~~~~i~~~~~~~~~~~~----------------~~l~~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~l~~~l~ 101 (244)
T smart00220 39 SILKKLKHPNIVRLYDVFEDEDK----------------LYLVMEYCDGGDLFDLLKKRGR-LSEDEARFYARQILSALE 101 (244)
T ss_pred HHHHhCCCCcHHHHHhheeeCCE----------------EEEEEeCCCCCCHHHHHHhccC-CCHHHHHHHHHHHHHHHH
Confidence 45556688988875554332211 1247889999999999976544 677799999999999999
Q ss_pred HhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccc
Q 001548 344 YHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNF 423 (1056)
Q Consensus 344 ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 423 (1056)
|||+.||+|+||+|+||+++.++.++++|||.+.......
T Consensus 102 ~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---------------------------------------- 141 (244)
T smart00220 102 YLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---------------------------------------- 141 (244)
T ss_pred HHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc----------------------------------------
Confidence 9999999999999999999999999999999886654110
Q ss_pred cccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCccc
Q 001548 424 SRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEE 503 (1056)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 503 (1056)
......++..|+|||.
T Consensus 142 ----------------------------------------------------------------~~~~~~~~~~~~~pE~ 157 (244)
T smart00220 142 ----------------------------------------------------------------LLTTFVGTPEYMAPEV 157 (244)
T ss_pred ----------------------------------------------------------------ccccccCCcCCCCHHH
Confidence 0013456778999999
Q ss_pred ccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCCCCC--CChhHHHHHHhccccCCCCCCCHHH
Q 001548 504 LSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLS--ENPKEAGFCLWQLHPEPLSRPTTRE 578 (1056)
Q Consensus 504 l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~~~~--~~~~~~~li~~lL~~dP~~Rpt~~e 578 (1056)
+.+..++.++||||||+++|+|+++ |............+.....+..... .+.++.+++.+||..+|.+||++.+
T Consensus 158 ~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ 237 (244)
T smart00220 158 LLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEE 237 (244)
T ss_pred HccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHH
Confidence 9988899999999999999999986 3331223333333433333322221 6778999999999999999999999
Q ss_pred Hhhhhhh
Q 001548 579 ILQSEVT 585 (1056)
Q Consensus 579 il~~~~~ 585 (1056)
+++||||
T Consensus 238 ~~~~~~~ 244 (244)
T smart00220 238 ALQHPFF 244 (244)
T ss_pred HhhCCCC
Confidence 9999997
No 466
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.90 E-value=5.9e-24 Score=215.16 Aligned_cols=206 Identities=14% Similarity=0.199 Sum_probs=151.1
Q ss_pred hhhccCC-CCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 264 MMVASNA-SPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 264 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
+++.-+. +|||+.+.+.+..- ....|+. ..|+.+..+.+.+-. .+...+++.++.|||.||
T Consensus 84 kIL~nL~gg~NIi~L~DiV~Dp-------~SktpaL-------iFE~v~n~Dfk~ly~----tl~d~dIryY~~elLkAL 145 (338)
T KOG0668|consen 84 KILQNLRGGPNIIKLLDIVKDP-------ESKTPSL-------IFEYVNNTDFKQLYP----TLTDYDIRYYIYELLKAL 145 (338)
T ss_pred HHHHhccCCCCeeehhhhhcCc-------cccCchh-------HhhhhccccHHHHhh----hhchhhHHHHHHHHHHHH
Confidence 3444444 99999887764421 1223333 677888888877643 355558999999999999
Q ss_pred HHhhhcCcccccCCCCCEEEccC-CcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccc
Q 001548 343 DYHHTQGVTFLDLKPSSFKLLQS-NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNM 421 (1056)
Q Consensus 343 ~ylHs~gIvHrDLKP~NILl~~~-~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 421 (1056)
+|||++||+|||+||.|++|+.. ..+++||.|||.+..
T Consensus 146 dyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH----------------------------------------- 184 (338)
T KOG0668|consen 146 DYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH----------------------------------------- 184 (338)
T ss_pred hHHHhcCcccccCCcceeeechhhceeeeeecchHhhcC-----------------------------------------
Confidence 99999999999999999999976 459999999997654
Q ss_pred cccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCc
Q 001548 422 NFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASP 501 (1056)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 501 (1056)
|.......+.+..|.-|
T Consensus 185 ---------------------------------------------------------------p~~eYnVRVASRyfKGP 201 (338)
T KOG0668|consen 185 ---------------------------------------------------------------PGKEYNVRVASRYFKGP 201 (338)
T ss_pred ---------------------------------------------------------------CCceeeeeeehhhcCCc
Confidence 11222356777889999
Q ss_pred ccccC-CCCCccchhHHHHHHHHHHhCC----CCcHHHHHHHHHhhcc--------------CCCCCC------------
Q 001548 502 EELSG-GVCTTSSNIYSLGVLFFELFGR----FDSERALAAAMSDLRD--------------RILPPS------------ 550 (1056)
Q Consensus 502 E~l~~-~~~t~~sDIwSLGvlL~eLlt~----f~~~~~~~~~~~~~~~--------------~~lp~~------------ 550 (1056)
|++.. ..|+.+-|+|||||+|..|+.. |.+.++..+..++.+- -.++|.
T Consensus 202 ELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~ 281 (338)
T KOG0668|consen 202 ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKP 281 (338)
T ss_pred hheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhcccccc
Confidence 99987 5589999999999999999953 4444333333221110 012211
Q ss_pred ---------CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhhh
Q 001548 551 ---------FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (1056)
Q Consensus 551 ---------~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~~ 591 (1056)
....+|+..+|+.++|..|-.+|+||.|++.||||....+.
T Consensus 282 w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~~~ 331 (338)
T KOG0668|consen 282 WSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVREA 331 (338)
T ss_pred HHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHHHH
Confidence 12346889999999999999999999999999999876543
No 467
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.90 E-value=3.1e-23 Score=234.68 Aligned_cols=242 Identities=19% Similarity=0.253 Sum_probs=199.9
Q ss_pred EEEEc-CCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCC-
Q 001548 784 SISFD-RDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTG- 861 (1056)
Q Consensus 784 sv~fs-pdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~- 861 (1056)
++..+ |.+++|.|||.||.|++|++....... ...+......|...|+++..... ++.|+|+|.|-+|++|+...+
T Consensus 29 ~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~-s~~~~asme~HsDWVNDiiL~~~-~~tlIS~SsDtTVK~W~~~~~~ 106 (735)
T KOG0308|consen 29 ALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEP-STPYIASMEHHSDWVNDIILCGN-GKTLISASSDTTVKVWNAHKDN 106 (735)
T ss_pred hccccCCCCceEEecCCCceEEEeccccccCCc-ccchhhhhhhhHhHHhhHHhhcC-CCceEEecCCceEEEeecccCc
Confidence 33344 467789999999999999987522110 11133445568899999988776 789999999999999999887
Q ss_pred -ceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCc--eeEEEe----------CCCCeEEEEEccCCCcE
Q 001548 862 -QTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKN--SLATIK----------NIANVCCVQFSAHSSHL 928 (1056)
Q Consensus 862 -~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~--~~~~~~----------~~~~V~sv~fsp~~~~~ 928 (1056)
-|..++..|.+-|.|+++-..+..++||||-|+.|.+||++++. .+.++. +...|++++.++.|. +
T Consensus 107 ~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t-~ 185 (735)
T KOG0308|consen 107 TFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGT-I 185 (735)
T ss_pred chhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcce-E
Confidence 68888999999999999933388899999999999999999873 333332 345799999999995 9
Q ss_pred EEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCC
Q 001548 929 LAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTN 1007 (1056)
Q Consensus 929 lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~ 1007 (1056)
+++|+..+.+++||.|+.+. +..+.||+..|..|..+ ++..++|||.||+|++||+. ..+|++++.-|..
T Consensus 186 ivsGgtek~lr~wDprt~~k-imkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLg--------qQrCl~T~~vH~e 256 (735)
T KOG0308|consen 186 IVSGGTEKDLRLWDPRTCKK-IMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLG--------QQRCLATYIVHKE 256 (735)
T ss_pred EEecCcccceEEeccccccc-eeeeeccccceEEEEEcCCCCeEeecCCCceEEeeecc--------ccceeeeEEeccC
Confidence 99999999999999999887 67778999999999998 77789999999999999998 6799999999999
Q ss_pred cEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCC
Q 001548 1008 EKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSW 1048 (1056)
Q Consensus 1008 ~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~ 1048 (1056)
.|.++.. +|+=..+.+|+.|+.|..-++..
T Consensus 257 ~VWaL~~-----------~~sf~~vYsG~rd~~i~~Tdl~n 286 (735)
T KOG0308|consen 257 GVWALQS-----------SPSFTHVYSGGRDGNIYRTDLRN 286 (735)
T ss_pred ceEEEee-----------CCCcceEEecCCCCcEEecccCC
Confidence 9988883 35556778888999888777665
No 468
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.90 E-value=9.6e-23 Score=232.49 Aligned_cols=238 Identities=20% Similarity=0.303 Sum_probs=203.4
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccc-eEeecCCCCeEE-EEEecCCCCEEEEEECCC
Q 001548 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYP-AVEMSNRSKLSC-VCWNNYIKNYLASADYDG 851 (1056)
Q Consensus 774 ~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~-~~~~~h~~~V~~-l~~~~~~~~~LaSgs~Dg 851 (1056)
.+.+|+..|+.+++.+ +..++++|.||++++|+-.. ..+.. ....+|.+-|.+ +++.+..+..+++|+.|+
T Consensus 9 ~l~gH~~DVr~v~~~~-~~~i~s~sRd~t~~vw~~~~------~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~ 81 (745)
T KOG0301|consen 9 ELEGHKSDVRAVAVTD-GVCIISGSRDGTVKVWAKKG------KQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDT 81 (745)
T ss_pred EeccCccchheeEecC-CeEEeecCCCCceeeeeccC------cccccceecccCcceeeccceeccccCcceEeecccc
Confidence 5679999999999874 55889999999999998643 22333 334567888877 888875466799999999
Q ss_pred cEEEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEE
Q 001548 852 VVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLA 930 (1056)
Q Consensus 852 ~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~la 930 (1056)
+|.+|......++.++++|...|+|++... ++. ++|||.|.++++|-.. ++..++. |.+.|.+|++-|.+ .++
T Consensus 82 ~i~v~~~~~~~P~~~LkgH~snVC~ls~~~-~~~-~iSgSWD~TakvW~~~--~l~~~l~gH~asVWAv~~l~e~--~~v 155 (745)
T KOG0301|consen 82 TIIVFKLSQAEPLYTLKGHKSNVCSLSIGE-DGT-LISGSWDSTAKVWRIG--ELVYSLQGHTASVWAVASLPEN--TYV 155 (745)
T ss_pred eEEEEecCCCCchhhhhccccceeeeecCC-cCc-eEecccccceEEecch--hhhcccCCcchheeeeeecCCC--cEE
Confidence 999999999999999999999999999776 566 9999999999999875 4444454 78999999999997 689
Q ss_pred EEeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEE
Q 001548 931 FGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKV 1010 (1056)
Q Consensus 931 sGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv 1010 (1056)
|||.|.+|++|.-. ..+.+|.||+..|..|++.++..++||+.||.|++|++. +.++.++.||++.|.
T Consensus 156 TgsaDKtIklWk~~---~~l~tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~~---------ge~l~~~~ghtn~vY 223 (745)
T KOG0301|consen 156 TGSADKTIKLWKGG---TLLKTFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDLD---------GEVLLEMHGHTNFVY 223 (745)
T ss_pred eccCcceeeeccCC---chhhhhccchhheeeeEEecCCCeEeecCCceEEEEecc---------CceeeeeeccceEEE
Confidence 99999999999753 246899999999999999999999999999999999984 689999999999998
Q ss_pred EEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCC
Q 001548 1011 GICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTS 1047 (1056)
Q Consensus 1011 ~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~ 1047 (1056)
+++ ...++.-++|+|-|++++||+..
T Consensus 224 sis-----------~~~~~~~Ivs~gEDrtlriW~~~ 249 (745)
T KOG0301|consen 224 SIS-----------MALSDGLIVSTGEDRTLRIWKKD 249 (745)
T ss_pred EEE-----------ecCCCCeEEEecCCceEEEeecC
Confidence 888 34466777999999999999987
No 469
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=1.2e-24 Score=224.55 Aligned_cols=218 Identities=19% Similarity=0.196 Sum_probs=152.6
Q ss_pred HHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHH
Q 001548 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (1056)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QI 338 (1056)
-..+.+++-.-+|.|+.+.++.-+. +. + .||..-. +..+...-+|...|-+.+. ++...++-+++||
T Consensus 99 vFre~kmLcfFkHdNVLSaLDILQP---ph------~--dfFqEiY-V~TELmQSDLHKIIVSPQ~-Ls~DHvKVFlYQI 165 (449)
T KOG0664|consen 99 VFREIKMLSSFRHDNVLSLLDILQP---AN------P--SFFQELY-VLTELMQSDLHKIIVSPQA-LTPDHVKVFVYQI 165 (449)
T ss_pred HHHHHHHHHhhccccHHHHHHhcCC---CC------c--hHHHHHH-HHHHHHHhhhhheeccCCC-CCcchhhhhHHHH
Confidence 3445667777799998876655331 11 1 1111111 1112244567777665554 5555899999999
Q ss_pred HHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccccccc
Q 001548 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (1056)
Q Consensus 339 l~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 418 (1056)
++||.|||+.||.||||||.|+|++++..+||+|||+++.....
T Consensus 166 LRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d------------------------------------ 209 (449)
T KOG0664|consen 166 LRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQR------------------------------------ 209 (449)
T ss_pred HhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchh------------------------------------
Confidence 99999999999999999999999999999999999999874310
Q ss_pred ccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCc
Q 001548 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (1056)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 498 (1056)
....+|..+-|.+|
T Consensus 210 ------------------------------------------------------------------~~~hMTqEVVTQYY 223 (449)
T KOG0664|consen 210 ------------------------------------------------------------------DRLNMTHEVVTQYY 223 (449)
T ss_pred ------------------------------------------------------------------hhhhhHHHHHHHHh
Confidence 11234466778899
Q ss_pred cCcccccC-CCCCccchhHHHHHHHHHHhCC---CCcHHHHHH--------------HH---------HhhccCCCCCCC
Q 001548 499 ASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERALAA--------------AM---------SDLRDRILPPSF 551 (1056)
Q Consensus 499 ~APE~l~~-~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~--------------~~---------~~~~~~~lp~~~ 551 (1056)
+|||++.| ..|+.++||||+||++.|||.+ |.......+ .| ..+|....+|.+
T Consensus 224 RAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~ 303 (449)
T KOG0664|consen 224 RAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDT 303 (449)
T ss_pred ccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCc
Confidence 99999999 4589999999999999999965 322211111 11 123333344443
Q ss_pred C---------CCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhhh
Q 001548 552 L---------SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (1056)
Q Consensus 552 ~---------~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~~~ 591 (1056)
. ....+...++..||++||.+|.+..+.+.|++..+.+..
T Consensus 304 ~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R~r 352 (449)
T KOG0664|consen 304 QRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGRLR 352 (449)
T ss_pred cceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccccccccee
Confidence 2 122345689999999999999999999999998776543
No 470
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.90 E-value=6.4e-21 Score=207.38 Aligned_cols=237 Identities=18% Similarity=0.259 Sum_probs=201.5
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcC
Q 001548 780 NVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDAC 859 (1056)
Q Consensus 780 ~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~ 859 (1056)
..++++...|..+.+.|||.|+++.+||... ........||..+|+.+.|+++ ...+++++.|..|++|...
T Consensus 220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s-------~q~l~~~~Gh~kki~~v~~~~~-~~~v~~aSad~~i~vws~~ 291 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGEDKTAVLFDKPS-------NQILATLKGHTKKITSVKFHKD-LDTVITASADEIIRVWSVP 291 (506)
T ss_pred CCeeEEeecCCCCcceecCCCCceEEEecch-------hhhhhhccCcceEEEEEEeccc-hhheeecCCcceEEeeccc
Confidence 3467777777778999999999999999874 2344567799999999999998 8889999999999999998
Q ss_pred CCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEeCC---CCeEEEEEccCCCcEEEEEeCCC
Q 001548 860 TGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNI---ANVCCVQFSAHSSHLLAFGSADY 936 (1056)
Q Consensus 860 t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~~~---~~V~sv~fsp~~~~~lasGs~Dg 936 (1056)
...+......|+.+|+.+..+| .+.||+++|+|++....|++++.++....+. -.+++.+|+|||- +|.+|..|+
T Consensus 292 ~~s~~~~~~~h~~~V~~ls~h~-tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgL-ifgtgt~d~ 369 (506)
T KOG0289|consen 292 LSSEPTSSRPHEEPVTGLSLHP-TGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGL-IFGTGTPDG 369 (506)
T ss_pred cccCccccccccccceeeeecc-CCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCce-EEeccCCCc
Confidence 8888888889999999999999 9999999999999999999999988777654 3489999999995 999999999
Q ss_pred eEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCC-CcEEEEEe
Q 001548 937 RTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHT-NEKVGICR 1014 (1056)
Q Consensus 937 ~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~-~~Vv~ls~ 1014 (1056)
.|++||+.+... +..|.+|+++|..++|+ +|-+|++++.|+.|++||+++. +...++.-.. -++.+++
T Consensus 370 ~vkiwdlks~~~-~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl--------~n~kt~~l~~~~~v~s~~- 439 (506)
T KOG0289|consen 370 VVKIWDLKSQTN-VAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKL--------KNFKTIQLDEKKEVNSLS- 439 (506)
T ss_pred eEEEEEcCCccc-cccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhh--------cccceeeccccccceeEE-
Confidence 999999999884 78899999999999999 5555999999999999999943 2233333221 1456666
Q ss_pred cCCcceeeEEeeCCCCEEEEEEcCCcEEEEeC
Q 001548 1015 LEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRT 1046 (1056)
Q Consensus 1015 ~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v 1046 (1056)
|...|.+|+.+|.|-+|.+++-
T Consensus 440 ----------fD~SGt~L~~~g~~l~Vy~~~k 461 (506)
T KOG0289|consen 440 ----------FDQSGTYLGIAGSDLQVYICKK 461 (506)
T ss_pred ----------EcCCCCeEEeecceeEEEEEec
Confidence 6778899999999988888873
No 471
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.90 E-value=3.5e-24 Score=241.99 Aligned_cols=219 Identities=14% Similarity=0.102 Sum_probs=146.6
Q ss_pred cccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhccccccc
Q 001548 305 RQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESAS 384 (1056)
Q Consensus 305 ~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~ 384 (1056)
.+|.|+.||++-.+|-+.| .+++..++.|+..+..||++.|.+|+|||||||+||||+.+|+|||+|||||..+.=
T Consensus 706 FVMdYIPGGDmMSLLIrmg-IFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRW--- 781 (1034)
T KOG0608|consen 706 FVMDYIPGGDMMSLLIRMG-IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW--- 781 (1034)
T ss_pred EEEeccCCccHHHHHHHhc-cCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeecccccccee---
Confidence 3899999999999997766 467779999999999999999999999999999999999999999999999976540
Q ss_pred CCCCCCchhhhhhcccccccccccccccccccccccccccccccc-cCCCCCCcccccccccccccCCCCCCCCcccccc
Q 001548 385 LDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSL-FPSKYGNKIETANESDINEVSIPHSHNDTNEHHT 463 (1056)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~ 463 (1056)
.+ .+|.+.++++ .++-++ +|..|+ |.+
T Consensus 782 ---TH-----dskYYq~gdH-------------------~RqDSmep~~e~~------------d~~------------- 809 (1034)
T KOG0608|consen 782 ---TH-----DSKYYQEGDH-------------------HRQDSMEPSPEWA------------DIS------------- 809 (1034)
T ss_pred ---cc-----ccccccCCCc-------------------cccccCCCchhhc------------ccc-------------
Confidence 00 0011100000 000000 000000 000
Q ss_pred cCCCCCCCCCCCCccccccccccc--cccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCC---CCcHHHHHHH
Q 001548 464 NAGFGNYSKSSSPLVSNTAQQQST--SVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAA 538 (1056)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~ 538 (1056)
..-.++.-... .+.+ .....+||+.|+|||+|....|+..+|+||.|||||||+.| |-........
T Consensus 810 --------~~lkvL~~ra~-~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq 880 (1034)
T KOG0608|consen 810 --------KCLKVLERRAM-RQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQ 880 (1034)
T ss_pred --------ccchHHHHHHH-hhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcce
Confidence 00000000000 1111 12267999999999999999999999999999999999975 4444333333
Q ss_pred HHhhccCCC--CCCCCCCChhHHHHHHhccccCCCCCC---CHHHHhhhhhhhhhh
Q 001548 539 MSDLRDRIL--PPSFLSENPKEAGFCLWQLHPEPLSRP---TTREILQSEVTNEFQ 589 (1056)
Q Consensus 539 ~~~~~~~~l--p~~~~~~~~~~~~li~~lL~~dP~~Rp---t~~eil~~~~~~~~~ 589 (1056)
++.+..+.. .+.-...++++.+||.+|. .++++|. .+++|..||||....
T Consensus 881 ~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkgID 935 (1034)
T KOG0608|consen 881 YKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKGID 935 (1034)
T ss_pred eeeeehhhccccccccccCHHHHHHHHHHh-cChhhhhcccchhhhhcCccccccc
Confidence 333332221 1223366888889998876 5788885 457899999998863
No 472
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.90 E-value=1.5e-22 Score=229.29 Aligned_cols=320 Identities=14% Similarity=0.157 Sum_probs=239.8
Q ss_pred cccccccccccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEE-cCCCCEEEEEeCC
Q 001548 722 DNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISF-DRDEDHFAAAGVS 800 (1056)
Q Consensus 722 ~~~~l~gh~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~f-spdg~~latg~~D 800 (1056)
....++.|..||..+.- .......+++|.|-++|+|+..... ....+ .+..|.+.|.|+++ -++..++|+||.|
T Consensus 65 ~~asme~HsDWVNDiiL--~~~~~tlIS~SsDtTVK~W~~~~~~-~~c~s--tir~H~DYVkcla~~ak~~~lvaSgGLD 139 (735)
T KOG0308|consen 65 YIASMEHHSDWVNDIIL--CGNGKTLISASSDTTVKVWNAHKDN-TFCMS--TIRTHKDYVKCLAYIAKNNELVASGGLD 139 (735)
T ss_pred hhhhhhhhHhHHhhHHh--hcCCCceEEecCCceEEEeecccCc-chhHh--hhhcccchheeeeecccCceeEEecCCC
Confidence 35667789999987654 2345577899999999999976542 11111 35589999999999 7889999999999
Q ss_pred CcEEEEEcCCCCC---CCcccccc-eEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEE
Q 001548 801 KKIKIFEFNALFN---DSVDVYYP-AVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWS 876 (1056)
Q Consensus 801 g~I~Iwdl~t~~~---~~~~~~~~-~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~s 876 (1056)
+.|.+||+++... .+...... ....+++..|++++-++. +..|++|+..+.+++||.++++.+-.+.+|++.|.+
T Consensus 140 ~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t-~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ 218 (735)
T KOG0308|consen 140 RKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQT-GTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRV 218 (735)
T ss_pred ccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCc-ceEEEecCcccceEEeccccccceeeeeccccceEE
Confidence 9999999996411 11111111 222288999999999998 889999999999999999999999999999999999
Q ss_pred EEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecC
Q 001548 877 VDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAG 955 (1056)
Q Consensus 877 v~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~g 955 (1056)
+-.++ ||+.++|+|.||+|++||++...|+.++. |...|.++..+|+-. .+++|+.||.|+.=|+++.......+ .
T Consensus 219 ll~~d-DGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~-~vYsG~rd~~i~~Tdl~n~~~~tlic-k 295 (735)
T KOG0308|consen 219 LLVND-DGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFT-HVYSGGRDGNIYRTDLRNPAKSTLIC-K 295 (735)
T ss_pred EEEcC-CCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcc-eEEecCCCCcEEecccCCchhheEee-c
Confidence 99999 99999999999999999999999999987 667799999999886 89999999999999999975533333 3
Q ss_pred CCCCeEEEEEc-CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEE-----ecCCcce-eeEEeeCC
Q 001548 956 HEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGIC-----RLEHNLF-PFTIFNLS 1028 (1056)
Q Consensus 956 H~~~V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls-----~~~~~~~-~~~~~s~~ 1028 (1056)
...+|..+... ..+-+.++++|+.|+=|...-..... ..+.+....+.-.+.+.... +.+++.. .-+..--+
T Consensus 296 ~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~~~~~l~-~s~~~~~~~T~~~~~~~~~~~tp~~vi~Gg~ai~k~~mL~d 374 (735)
T KOG0308|consen 296 EDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLEPDIALS-VSGDLDFFSTDSNNHSCDLTNTPDSVIPGGAAIKKHAMLND 374 (735)
T ss_pred CCCchhhhhhccccCCceeeeccccceecCCccccccc-cCCCCCcccccCCCccccccCCCceeccCchhhhhhhhhcC
Confidence 46678888877 44556889999999999886433221 12333333222222222211 1111111 11223457
Q ss_pred CCEEEEEEcCCcEEEEeCCCCeE
Q 001548 1029 DCWLLLVCFDFTTLSFRTSWGCL 1051 (1056)
Q Consensus 1029 g~~l~s~s~D~~v~iW~v~~~~~ 1051 (1056)
.+.++|-..++.+.+||+--.++
T Consensus 375 kRhVlTkDa~gnv~lwDIl~~~~ 397 (735)
T KOG0308|consen 375 KRHVLTKDAKGNVALWDILACVK 397 (735)
T ss_pred cceEeeecCCCCEEEEEeeeeee
Confidence 78999999999999999865544
No 473
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.90 E-value=6e-22 Score=207.14 Aligned_cols=257 Identities=18% Similarity=0.263 Sum_probs=199.2
Q ss_pred CCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEE
Q 001548 777 NSANVICSISFDR-DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKL 855 (1056)
Q Consensus 777 ~h~~~V~sv~fsp-dg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~l 855 (1056)
...+.|.+++|+| ...++++++.|++|++|++... ....+.....|.+.|.+++|+.+ +..+++|+.|+.+++
T Consensus 25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~-----g~~~~ka~~~~~~PvL~v~Wsdd-gskVf~g~~Dk~~k~ 98 (347)
T KOG0647|consen 25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNS-----GQLVPKAQQSHDGPVLDVCWSDD-GSKVFSGGCDKQAKL 98 (347)
T ss_pred CcccchheeEeccccCceEEecccCCceEEEEEecC-----CcccchhhhccCCCeEEEEEccC-CceEEeeccCCceEE
Confidence 4577899999999 5667779999999999999741 12344555678999999999998 899999999999999
Q ss_pred EEcCCCceEEEEecCCCcEEEEEEecCCCC--EEEEEeCCCcEEEEECCCCceeEEEeCCCCeEEEEEccCCCcEEEEEe
Q 001548 856 WDACTGQTVSHYIEHEKRAWSVDFSQVHPT--KLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGS 933 (1056)
Q Consensus 856 WD~~t~~~v~~~~~H~~~V~sv~fsp~d~~--~laSgs~Dg~V~IWDlr~~~~~~~~~~~~~V~sv~fsp~~~~~lasGs 933 (1056)
||+.+++ +..+..|..+|.++.|-+ ... .|+|||.|++||.||+|+..++.++.....|.++..-. + +++.+.
T Consensus 99 wDL~S~Q-~~~v~~Hd~pvkt~~wv~-~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~~--p-m~vVat 173 (347)
T KOG0647|consen 99 WDLASGQ-VSQVAAHDAPVKTCHWVP-GMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVLY--P-MAVVAT 173 (347)
T ss_pred EEccCCC-eeeeeecccceeEEEEec-CCCcceeEecccccceeecccCCCCeeeeeeccceeeehhccC--c-eeEEEe
Confidence 9999995 556678999999999987 444 79999999999999999999999999988888877643 2 788899
Q ss_pred CCCeEEEEEcCCCCcceEEecC-CCCCeEEEEEc-CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEE
Q 001548 934 ADYRTYCYDLRNARAPWCVLAG-HEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVG 1011 (1056)
Q Consensus 934 ~Dg~V~lwDlr~~~~~~~~l~g-H~~~V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ 1011 (1056)
.+..|.+|.|+++......... -.--+.+|+.. +....+-||..|.+.|..+..+.. +.-++|+.|...-.
T Consensus 174 a~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~------~~nFtFkCHR~~~~- 246 (347)
T KOG0647|consen 174 AERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNP------KDNFTFKCHRSTNS- 246 (347)
T ss_pred cCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCc------cCceeEEEeccCCC-
Confidence 9999999999886542222111 12236777765 666679999999999999984322 44578888874211
Q ss_pred EEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCCeEE
Q 001548 1012 ICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWGCLL 1052 (1056)
Q Consensus 1012 ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~~~~ 1052 (1056)
.. +.-+-+....|+|....|+|.|.||+..+||-+.++-+
T Consensus 247 ~~-~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kL 286 (347)
T KOG0647|consen 247 VN-DDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKL 286 (347)
T ss_pred CC-CceEEecceEeecccceEEEecCCceEEEecchhhhhh
Confidence 00 00111123459999999999999999999998876644
No 474
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.90 E-value=1e-21 Score=210.01 Aligned_cols=248 Identities=15% Similarity=0.246 Sum_probs=203.9
Q ss_pred ecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEE
Q 001548 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVK 854 (1056)
Q Consensus 775 l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~ 854 (1056)
|..|+..|.+++.+|+.+++||||.|....||++.+ ...+....+|+..|+|+.|+.+ +.+||||+.+|.|+
T Consensus 60 F~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~-------ge~~~eltgHKDSVt~~~Fshd-gtlLATGdmsG~v~ 131 (399)
T KOG0296|consen 60 FDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDIST-------GEFAGELTGHKDSVTCCSFSHD-GTLLATGDMSGKVL 131 (399)
T ss_pred hhhcCCceEEEEeCCCCceEEecCCCceEEEEEccC-------CcceeEecCCCCceEEEEEccC-ceEEEecCCCccEE
Confidence 568999999999999999999999999999999985 2356667799999999999998 99999999999999
Q ss_pred EEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEEEe
Q 001548 855 LWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGS 933 (1056)
Q Consensus 855 lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~lasGs 933 (1056)
||+..++.....+..-...+-=+.|+| -+..|+.|+.||.+-+|.+.++...+.+. |+.+++|=.|.|+|+ .+++|.
T Consensus 132 v~~~stg~~~~~~~~e~~dieWl~WHp-~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGK-r~~tgy 209 (399)
T KOG0296|consen 132 VFKVSTGGEQWKLDQEVEDIEWLKWHP-RAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGK-RILTGY 209 (399)
T ss_pred EEEcccCceEEEeecccCceEEEEecc-cccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCc-eEEEEe
Confidence 999999998888876677888899999 89999999999999999999876666665 778999999999997 788999
Q ss_pred CCCeEEEEEcCCCCcceEEec---------------------------------------------------CCCCCeEE
Q 001548 934 ADYRTYCYDLRNARAPWCVLA---------------------------------------------------GHEKAVSY 962 (1056)
Q Consensus 934 ~Dg~V~lwDlr~~~~~~~~l~---------------------------------------------------gH~~~V~~ 962 (1056)
.||+|++|++.+..+ +..+. .|...+.+
T Consensus 210 ~dgti~~Wn~ktg~p-~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~es 288 (399)
T KOG0296|consen 210 DDGTIIVWNPKTGQP-LHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDES 288 (399)
T ss_pred cCceEEEEecCCCce-eEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhh
Confidence 999999999987643 22211 12222333
Q ss_pred EEEcC----CCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcC
Q 001548 963 VKFLD----SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFD 1038 (1056)
Q Consensus 963 l~fs~----~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D 1038 (1056)
|.|.+ =.+.++|+-||+|.|||+... .++..-.|...|+.+. |-+ ..+|++++.|
T Consensus 289 ve~~~~ss~lpL~A~G~vdG~i~iyD~a~~---------~~R~~c~he~~V~~l~-----------w~~-t~~l~t~c~~ 347 (399)
T KOG0296|consen 289 VESIPSSSKLPLAACGSVDGTIAIYDLAAS---------TLRHICEHEDGVTKLK-----------WLN-TDYLLTACAN 347 (399)
T ss_pred hhhcccccccchhhcccccceEEEEecccc---------hhheeccCCCceEEEE-----------EcC-cchheeeccC
Confidence 33321 124778889999999999732 2344556888888888 555 6788999999
Q ss_pred CcEEEEeCCCCeEEEE
Q 001548 1039 FTTLSFRTSWGCLLLM 1054 (1056)
Q Consensus 1039 ~~v~iW~v~~~~~~~~ 1054 (1056)
++|+.||..+|.+...
T Consensus 348 g~v~~wDaRtG~l~~~ 363 (399)
T KOG0296|consen 348 GKVRQWDARTGQLKFT 363 (399)
T ss_pred ceEEeeeccccceEEE
Confidence 9999999999988653
No 475
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.89 E-value=1.4e-23 Score=237.18 Aligned_cols=239 Identities=18% Similarity=0.135 Sum_probs=182.9
Q ss_pred ccceeeeCCCCCccccccccccccccccccCCchhHHHHhhh-hhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccc
Q 001548 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGA-MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1056)
Q Consensus 222 g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1056)
-+|-||+|...+--+..+.+.+.+.-+...-+.+ ..+...+ -+|+.-.||+|+.++...+-+
T Consensus 401 qFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~-tekflqEa~iMrnfdHphIikLIGv~~e~---------------- 463 (974)
T KOG4257|consen 401 QFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDD-TEKFLQEASIMRNFDHPHIIKLIGVCVEQ---------------- 463 (974)
T ss_pred cccceeeeEecccccCcceeeeeehhccCCChhh-HHHHHHHHHHHHhCCCcchhheeeeeecc----------------
Confidence 4599999998765444344444433333223333 4444333 457788999999988884422
Q ss_pred cCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhccc
Q 001548 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1056)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~ 380 (1056)
.-+++||.+.-|.|++||+.+...++......|+.||+.||.|||+.++|||||-..|||+.+..-||++||||+|.+.
T Consensus 464 -P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~e 542 (974)
T KOG4257|consen 464 -PMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLE 542 (974)
T ss_pred -ceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhcc
Confidence 2245999999999999999888888888899999999999999999999999999999999999999999999999877
Q ss_pred ccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCccc
Q 001548 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1056)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~ 460 (1056)
++...
T Consensus 543 d~~yY--------------------------------------------------------------------------- 547 (974)
T KOG4257|consen 543 DDAYY--------------------------------------------------------------------------- 547 (974)
T ss_pred ccchh---------------------------------------------------------------------------
Confidence 42211
Q ss_pred ccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC----CCCcHHHHH
Q 001548 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG----RFDSERALA 536 (1056)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt----~f~~~~~~~ 536 (1056)
..+ ...-..-|||||.+.-..+++++|||-|||++||+|. ||.+-.+.
T Consensus 548 -----------kaS----------------~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNs- 599 (974)
T KOG4257|consen 548 -----------KAS----------------RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNS- 599 (974)
T ss_pred -----------hcc----------------ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccccc-
Confidence 000 0001123999999999999999999999999999984 46554333
Q ss_pred HHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001548 537 AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1056)
Q Consensus 537 ~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~ 581 (1056)
..+..+..+..+|.++.++|.+..|+.+||.+||++||++.+|..
T Consensus 600 DVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~ 644 (974)
T KOG4257|consen 600 DVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKA 644 (974)
T ss_pred ceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence 334456666777888899999999999999999999999988754
No 476
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89 E-value=1.7e-21 Score=204.92 Aligned_cols=264 Identities=14% Similarity=0.254 Sum_probs=208.8
Q ss_pred ccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 001548 731 NLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNA 810 (1056)
Q Consensus 731 ~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t 810 (1056)
..|+.+++. .+.+..|.+++||++++++....+....+ .|..++.+++|.+ ...+++|+.||.|+.+|+++
T Consensus 14 d~IS~v~f~--~~~~~LLvssWDgslrlYdv~~~~l~~~~------~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~ 84 (323)
T KOG1036|consen 14 DGISSVKFS--PSSSDLLVSSWDGSLRLYDVPANSLKLKF------KHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNT 84 (323)
T ss_pred hceeeEEEc--CcCCcEEEEeccCcEEEEeccchhhhhhe------ecCCceeeeeccC-CceEEEeccCceEEEEEecC
Confidence 356777772 44566778999999999998876554444 5789999999995 66788999999999999986
Q ss_pred CCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEE
Q 001548 811 LFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASG 890 (1056)
Q Consensus 811 ~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSg 890 (1056)
. .......|...|.||++++. .+.+++||+|++|++||.+....+..+. ....|.|++.. ++.|+.|
T Consensus 85 ~--------~~~~igth~~~i~ci~~~~~-~~~vIsgsWD~~ik~wD~R~~~~~~~~d-~~kkVy~~~v~---g~~LvVg 151 (323)
T KOG1036|consen 85 G--------NEDQIGTHDEGIRCIEYSYE-VGCVISGSWDKTIKFWDPRNKVVVGTFD-QGKKVYCMDVS---GNRLVVG 151 (323)
T ss_pred C--------cceeeccCCCceEEEEeecc-CCeEEEcccCccEEEEeccccccccccc-cCceEEEEecc---CCEEEEe
Confidence 2 22334568999999999987 7899999999999999999866666665 44589999874 5789999
Q ss_pred eCCCcEEEEECCCCceeEEEe---CCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCC---cceEEecCCCC------
Q 001548 891 SDDCSVKLWNINEKNSLATIK---NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNAR---APWCVLAGHEK------ 958 (1056)
Q Consensus 891 s~Dg~V~IWDlr~~~~~~~~~---~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~---~~~~~l~gH~~------ 958 (1056)
..|..|.+||+|+-....... .+-.+.||++.|.+. =++++|-||.|.+=.+.... .....|+.|..
T Consensus 152 ~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~e-Gy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~ 230 (323)
T KOG1036|consen 152 TSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGE-GYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTE 230 (323)
T ss_pred ecCceEEEEEcccccchhhhccccceeEEEEEEEecCCC-ceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCce
Confidence 999999999999866443222 344689999999765 56779999998876665441 12467888876
Q ss_pred ---CeEEEEEc-CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEE
Q 001548 959 ---AVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLL 1034 (1056)
Q Consensus 959 ---~V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s 1034 (1056)
+|++++|+ -.++|+||+.||.|.+||+. ..+.+..|.+....|.+++ |+.+|..||.
T Consensus 231 ~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~--------~rKrl~q~~~~~~SI~sls-----------fs~dG~~LAi 291 (323)
T KOG1036|consen 231 IIYPVNAIAFHPIHGTFATGGSDGIVNIWDLF--------NRKRLKQLAKYETSISSLS-----------FSMDGSLLAI 291 (323)
T ss_pred EEEEeceeEeccccceEEecCCCceEEEccCc--------chhhhhhccCCCCceEEEE-----------eccCCCeEEE
Confidence 79999999 46789999999999999998 4466778888888888888 6777877777
Q ss_pred EE
Q 001548 1035 VC 1036 (1056)
Q Consensus 1035 ~s 1036 (1056)
++
T Consensus 292 a~ 293 (323)
T KOG1036|consen 292 AS 293 (323)
T ss_pred Ee
Confidence 65
No 477
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.89 E-value=1.8e-23 Score=247.68 Aligned_cols=183 Identities=14% Similarity=0.057 Sum_probs=130.7
Q ss_pred CCcccccCCCCCHHHHHHhcCC-----------------------CCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCC
Q 001548 303 GLRQGSSDHGVNLREWLNARGH-----------------------KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSS 359 (1056)
Q Consensus 303 ~~~~~~~~~GgsL~~~l~~~~~-----------------------~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~N 359 (1056)
-..+++|+++++|.++|..... .++...++.++.||+.||.|||++||+||||||+|
T Consensus 260 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~N 339 (507)
T PLN03224 260 QWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPEN 339 (507)
T ss_pred eEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHh
Confidence 3568999999999999864211 12445688999999999999999999999999999
Q ss_pred EEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCccc
Q 001548 360 FKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIE 439 (1056)
Q Consensus 360 ILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (1056)
||++.++.+||+|||+++.......
T Consensus 340 ILl~~~~~~kL~DFGla~~~~~~~~------------------------------------------------------- 364 (507)
T PLN03224 340 LLVTVDGQVKIIDFGAAVDMCTGIN------------------------------------------------------- 364 (507)
T ss_pred EEECCCCcEEEEeCcCccccccCCc-------------------------------------------------------
Confidence 9999999999999999865431000
Q ss_pred ccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCC-----------
Q 001548 440 TANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV----------- 508 (1056)
Q Consensus 440 ~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~----------- 508 (1056)
.......+|+.|+|||++....
T Consensus 365 -----------------------------------------------~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~ 397 (507)
T PLN03224 365 -----------------------------------------------FNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMA 397 (507)
T ss_pred -----------------------------------------------cCccccCCCcceeChhhhcCCCCCCccchhhhh
Confidence 0000224578899999986432
Q ss_pred ---------CC--ccchhHHHHHHHHHHhCCC-CcHHH-------HH-------HHHHhhccCCCCCCCCCCChhHHHHH
Q 001548 509 ---------CT--TSSNIYSLGVLFFELFGRF-DSERA-------LA-------AAMSDLRDRILPPSFLSENPKEAGFC 562 (1056)
Q Consensus 509 ---------~t--~~sDIwSLGvlL~eLlt~f-~~~~~-------~~-------~~~~~~~~~~lp~~~~~~~~~~~~li 562 (1056)
|+ .+.||||+||+||+|+++. .+... .. .+........-.+.+...++...+|+
T Consensus 398 ~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi 477 (507)
T PLN03224 398 ALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLA 477 (507)
T ss_pred hhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHH
Confidence 22 2479999999999999752 12111 00 00111111111233446678889999
Q ss_pred HhccccCC---CCCCCHHHHhhhhhhhh
Q 001548 563 LWQLHPEP---LSRPTTREILQSEVTNE 587 (1056)
Q Consensus 563 ~~lL~~dP---~~Rpt~~eil~~~~~~~ 587 (1056)
.+||.++| .+|+|+.|+|+||||..
T Consensus 478 ~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 478 CKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred HHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 99999876 68999999999999964
No 478
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.89 E-value=6.8e-23 Score=236.04 Aligned_cols=231 Identities=20% Similarity=0.258 Sum_probs=197.3
Q ss_pred cEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCCCCCcccccceEee
Q 001548 747 RLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRD-EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM 825 (1056)
Q Consensus 747 ~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspd-g~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~ 825 (1056)
+.+++..|.+.+||+++.--...+. .|..|+-.|.++.|++. ..+|++||.||+||+||+.. ......+.
T Consensus 103 IAT~s~nG~i~vWdlnk~~rnk~l~--~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~-------~~S~~t~~ 173 (839)
T KOG0269|consen 103 IATCSTNGVISVWDLNKSIRNKLLT--VFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRS-------KKSKSTFR 173 (839)
T ss_pred heeecCCCcEEEEecCccccchhhh--HhhhhccceeeeeeccCCccEEEecCCCceEEEEeeec-------cccccccc
Confidence 3477889999999998741111111 46799999999999985 57899999999999999974 12233445
Q ss_pred cCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCC-ceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCC
Q 001548 826 SNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTG-QTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEK 904 (1056)
Q Consensus 826 ~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~-~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~ 904 (1056)
+....|.+|.|+|..++.|+++...|.+++||++.. ++...|..|.++|.|+.|+| +..+|||||.|++|+|||+.+.
T Consensus 174 ~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhP-nr~~lATGGRDK~vkiWd~t~~ 252 (839)
T KOG0269|consen 174 SNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHP-NREWLATGGRDKMVKIWDMTDS 252 (839)
T ss_pred ccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecC-CCceeeecCCCccEEEEeccCC
Confidence 577889999999988999999999999999999864 68888999999999999999 9999999999999999999865
Q ss_pred c--eeEEEeCCCCeEEEEEccCCCcEEEEEe--CCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc--CCCEEEEEECCC
Q 001548 905 N--SLATIKNIANVCCVQFSAHSSHLLAFGS--ADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL--DSGTLVTASTDN 978 (1056)
Q Consensus 905 ~--~~~~~~~~~~V~sv~fsp~~~~~lasGs--~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs--~~~~L~SgS~Dg 978 (1056)
. .+.++...++|.+|+|-|...+.||+++ .|..|+|||+|..-.|..++..|+..|+.++|. +...+.|+|.|+
T Consensus 253 ~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~ 332 (839)
T KOG0269|consen 253 RAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRINLWSCSKDG 332 (839)
T ss_pred CccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccceeccCCCceeeEeecCcc
Confidence 4 5677888899999999999999999987 578899999999999999999999999999997 455699999999
Q ss_pred eEEEEECCC
Q 001548 979 KLKLWDLKR 987 (1056)
Q Consensus 979 ~IkiWdl~~ 987 (1056)
+|..-.+++
T Consensus 333 tv~qh~~kn 341 (839)
T KOG0269|consen 333 TVLQHLFKN 341 (839)
T ss_pred HHHHhhhhc
Confidence 997766653
No 479
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.89 E-value=2.2e-21 Score=222.59 Aligned_cols=269 Identities=19% Similarity=0.282 Sum_probs=220.0
Q ss_pred EEEECCCeEEEEEccC-ceE---EeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceE
Q 001548 748 LGAFFDGLCKYARYSK-FEV---QGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAV 823 (1056)
Q Consensus 748 ls~s~D~~ikiw~~~~-~~~---~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~ 823 (1056)
|.-..++++.++.++. ... .....+-++.+|-+.|.+++|+.+...+++|+ .+.|+||+..+. ....
T Consensus 338 lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga-~~SikiWn~~t~--------kciR 408 (888)
T KOG0306|consen 338 LVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASGA-GESIKIWNRDTL--------KCIR 408 (888)
T ss_pred EEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCceeeeecC-CCcEEEEEccCc--------ceeE
Confidence 4446677777776543 111 11123345779999999999998888888776 568999998752 1122
Q ss_pred eecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 001548 824 EMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINE 903 (1056)
Q Consensus 824 ~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~ 903 (1056)
.+. .+.+.|.+|.|. +.++++|...|.+.++|+.+...+.+.+.|++.+|+++..| |+..++|||.|.+|++||..-
T Consensus 409 Ti~-~~y~l~~~Fvpg-d~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~p-D~~g~vT~saDktVkfWdf~l 485 (888)
T KOG0306|consen 409 TIT-CGYILASKFVPG-DRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSP-DNKGFVTGSADKTVKFWDFKL 485 (888)
T ss_pred Eec-cccEEEEEecCC-CceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecC-CCCceEEecCCcEEEEEeEEE
Confidence 222 348899999998 88999999999999999999999999999999999999999 899999999999999999741
Q ss_pred -----Cc--ee------EEEeCCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCC
Q 001548 904 -----KN--SL------ATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSG 969 (1056)
Q Consensus 904 -----~~--~~------~~~~~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs-~~~ 969 (1056)
+. .+ .+++-...|.|+.++|++. +||+|=-|++|++|-+.+.+- .-.+-||.-||.|+..+ ++.
T Consensus 486 ~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk-~LaVsLLdnTVkVyflDtlKF-flsLYGHkLPV~smDIS~DSk 563 (888)
T KOG0306|consen 486 VVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGK-LLAVSLLDNTVKVYFLDTLKF-FLSLYGHKLPVLSMDISPDSK 563 (888)
T ss_pred EeccCcccceeeeeccceEEeccccEEEEEEcCCCc-EEEEEeccCeEEEEEecceee-eeeecccccceeEEeccCCcC
Confidence 11 11 2334567899999999997 999999999999999998876 55678999999999999 788
Q ss_pred EEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCC
Q 001548 970 TLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWG 1049 (1056)
Q Consensus 970 ~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~ 1049 (1056)
.++|||.|.+||||-+. -|.|-.+|-+|.+.|-++. |-|....+.+||.|+.++-||-..-
T Consensus 564 livTgSADKnVKiWGLd--------FGDCHKS~fAHdDSvm~V~-----------F~P~~~~FFt~gKD~kvKqWDg~kF 624 (888)
T KOG0306|consen 564 LIVTGSADKNVKIWGLD--------FGDCHKSFFAHDDSVMSVQ-----------FLPKTHLFFTCGKDGKVKQWDGEKF 624 (888)
T ss_pred eEEeccCCCceEEeccc--------cchhhhhhhcccCceeEEE-----------EcccceeEEEecCcceEEeechhhh
Confidence 89999999999999998 5789999999999997777 6677777889999999999986543
No 480
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.89 E-value=2.1e-22 Score=221.16 Aligned_cols=285 Identities=19% Similarity=0.197 Sum_probs=225.6
Q ss_pred ccccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEc
Q 001548 729 RENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEF 808 (1056)
Q Consensus 729 h~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl 808 (1056)
|...|.++.. .++...+-..--|.+|+||++.-.-+.-...-+..+..+.|.++...|||+.|++||.-.++.|||+
T Consensus 418 HGEvVcAvtI---S~~trhVyTgGkgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDL 494 (705)
T KOG0639|consen 418 HGEVVCAVTI---SNPTRHVYTGGKGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDL 494 (705)
T ss_pred cCcEEEEEEe---cCCcceeEecCCCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeec
Confidence 6666655543 3444444334567899999875432222333334467889999999999999999999999999999
Q ss_pred CCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEE
Q 001548 809 NALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLA 888 (1056)
Q Consensus 809 ~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~la 888 (1056)
..... ..........-.++.++.+|+ .++.++|..||.|.|||+.....++.|.+|.+.+.|++.++ +|..|-
T Consensus 495 AapTp-----rikaeltssapaCyALa~spD-akvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~-dGtklW 567 (705)
T KOG0639|consen 495 AAPTP-----RIKAELTSSAPACYALAISPD-AKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISK-DGTKLW 567 (705)
T ss_pred cCCCc-----chhhhcCCcchhhhhhhcCCc-cceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecC-CCceee
Confidence 75211 111111112234667888998 88889999999999999999999999999999999999999 999999
Q ss_pred EEeCCCcEEEEECCCCceeEEEeCCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-C
Q 001548 889 SGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-D 967 (1056)
Q Consensus 889 Sgs~Dg~V~IWDlr~~~~~~~~~~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs-~ 967 (1056)
||+-|++|+.||+|++..++.....+.|.++..+|.+. .+|.|-.++.|-+........ +.+.-|+..|.+|+|. .
T Consensus 568 TGGlDntvRcWDlregrqlqqhdF~SQIfSLg~cP~~d-WlavGMens~vevlh~skp~k--yqlhlheScVLSlKFa~c 644 (705)
T KOG0639|consen 568 TGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGYCPTGD-WLAVGMENSNVEVLHTSKPEK--YQLHLHESCVLSLKFAYC 644 (705)
T ss_pred cCCCccceeehhhhhhhhhhhhhhhhhheecccCCCcc-ceeeecccCcEEEEecCCccc--eeecccccEEEEEEeccc
Confidence 99999999999999999988888888999999999997 899999999998888776554 6777899999999998 7
Q ss_pred CCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeC
Q 001548 968 SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRT 1046 (1056)
Q Consensus 968 ~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v 1046 (1056)
+..++|.+.|+.+..|..-.+ ..++..+ -+..|++.. .|.++++++||+.|.+-.+|.|
T Consensus 645 GkwfvStGkDnlLnawrtPyG--------asiFqsk-E~SsVlsCD-----------IS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 645 GKWFVSTGKDNLLNAWRTPYG--------ASIFQSK-ESSSVLSCD-----------ISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred CceeeecCchhhhhhccCccc--------cceeecc-ccCcceeee-----------eccCceEEEecCCCcceEEEEE
Confidence 888999999999999998743 2333322 345566555 6789999999999999888875
No 481
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.89 E-value=3.7e-23 Score=232.82 Aligned_cols=234 Identities=18% Similarity=0.136 Sum_probs=180.7
Q ss_pred cceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccC
Q 001548 223 KGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIG 302 (1056)
Q Consensus 223 ~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (1056)
.|-||.|.+- -+ .-.++.++++.++++.+.- .+.+++|...+|||.|.++.+ ++.-+.+|
T Consensus 280 YGeVYeGvWK--ky--slTvAVKtLKEDtMeveEF--LkEAAvMKeikHpNLVqLLGV-----------CT~EpPFY--- 339 (1157)
T KOG4278|consen 280 YGEVYEGVWK--KY--SLTVAVKTLKEDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV-----------CTHEPPFY--- 339 (1157)
T ss_pred ccceeeeeee--cc--ceeeehhhhhhcchhHHHH--HHHHHHHHhhcCccHHHHhhh-----------hccCCCeE---
Confidence 3999999882 11 2234556666666665533 344567889999999977666 23333333
Q ss_pred CCcccccCCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhcccc
Q 001548 303 GLRQGSSDHGVNLREWLNARGH-KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLE 381 (1056)
Q Consensus 303 ~~~~~~~~~GgsL~~~l~~~~~-~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~ 381 (1056)
++.||+.-|+|.+||+...+ .++....+.++.||..|++||..+++|||||-..|+|+..+..||++||||++.+.+
T Consensus 340 --IiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtg 417 (1157)
T KOG4278|consen 340 --IITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTG 417 (1157)
T ss_pred --EEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcC
Confidence 58899999999999987654 466667788899999999999999999999999999999999999999999999774
Q ss_pred cccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccc
Q 001548 382 SASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEH 461 (1056)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~ 461 (1056)
+... .
T Consensus 418 DTYT---------------------------------------------------------------------------A 422 (1157)
T KOG4278|consen 418 DTYT---------------------------------------------------------------------------A 422 (1157)
T ss_pred Ccee---------------------------------------------------------------------------c
Confidence 2110 0
Q ss_pred cccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC----CCCcHHHHHH
Q 001548 462 HTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG----RFDSERALAA 537 (1056)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt----~f~~~~~~~~ 537 (1056)
|..+. -..-|.|||-|.-..++.++|||+|||+|||+.| +|++ -++.+
T Consensus 423 HAGAK---------------------------FPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPG-idlSq 474 (1157)
T KOG4278|consen 423 HAGAK---------------------------FPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQ 474 (1157)
T ss_pred ccCcc---------------------------CcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCC-ccHHH
Confidence 00001 1123899999988889999999999999999986 3544 45666
Q ss_pred HHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001548 538 AMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1056)
Q Consensus 538 ~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~ 581 (1056)
....+..+..-.....++|+...|++.||++.|+.||+++||-+
T Consensus 475 VY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHq 518 (1157)
T KOG4278|consen 475 VYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQ 518 (1157)
T ss_pred HHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHH
Confidence 66677777667778899999999999999999999999999865
No 482
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.89 E-value=8e-22 Score=226.21 Aligned_cols=242 Identities=21% Similarity=0.322 Sum_probs=206.0
Q ss_pred ccccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecC-CCCCEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 001548 729 RENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNN-SANVICSISFDRDEDHFAAAGVSKKIKIFE 807 (1056)
Q Consensus 729 h~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~-h~~~V~sv~fspdg~~latg~~Dg~I~Iwd 807 (1056)
+++.|.++.+ .........|..+|.+.|||....+....+. + |...|-+++|. +..+.+|+.|+.|..+|
T Consensus 216 ~~~~vtSv~w--s~~G~~LavG~~~g~v~iwD~~~~k~~~~~~-----~~h~~rvg~laW~--~~~lssGsr~~~I~~~d 286 (484)
T KOG0305|consen 216 GEELVTSVKW--SPDGSHLAVGTSDGTVQIWDVKEQKKTRTLR-----GSHASRVGSLAWN--SSVLSSGSRDGKILNHD 286 (484)
T ss_pred CCCceEEEEE--CCCCCEEEEeecCCeEEEEehhhcccccccc-----CCcCceeEEEecc--CceEEEecCCCcEEEEE
Confidence 3677888776 2233444477899999999987655444443 5 99999999998 78899999999999999
Q ss_pred cCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecCCCCEE
Q 001548 808 FNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKL 887 (1056)
Q Consensus 808 l~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~l 887 (1056)
+... ........+|...|..++|+++ +.+||+|+.|+.|.|||.....+...|.+|...|-+++|+|....+|
T Consensus 287 vR~~------~~~~~~~~~H~qeVCgLkws~d-~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lL 359 (484)
T KOG0305|consen 287 VRIS------QHVVSTLQGHRQEVCGLKWSPD-GNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLL 359 (484)
T ss_pred Eecc------hhhhhhhhcccceeeeeEECCC-CCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCce
Confidence 9752 1111236679999999999999 99999999999999999988889999999999999999999888999
Q ss_pred EEEe--CCCcEEEEECCCCceeEEEeCCCCeEEEEEccCCCcEEEE-EeCCCeEEEEEcCCCCcceEEecCCCCCeEEEE
Q 001548 888 ASGS--DDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAF-GSADYRTYCYDLRNARAPWCVLAGHEKAVSYVK 964 (1056)
Q Consensus 888 aSgs--~Dg~V~IWDlr~~~~~~~~~~~~~V~sv~fsp~~~~~las-Gs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~ 964 (1056)
|+|+ .|++|++||+.++..+..+...+.||+|.|++..+.++.+ |..++.|.||+..+.+. +..+.+|...|.+++
T Consensus 360 AsGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~-~~~l~gH~~RVl~la 438 (484)
T KOG0305|consen 360 ATGGGSADRCIKFWNTNTGARIDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKL-VAELLGHTSRVLYLA 438 (484)
T ss_pred EEcCCCcccEEEEEEcCCCcEecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccce-eeeecCCcceeEEEE
Confidence 9976 6899999999999999999999999999999998655554 44678999999998765 788999999999999
Q ss_pred Ec-CCCEEEEEECCCeEEEEECCC
Q 001548 965 FL-DSGTLVTASTDNKLKLWDLKR 987 (1056)
Q Consensus 965 fs-~~~~L~SgS~Dg~IkiWdl~~ 987 (1056)
++ ++..++||+.|.+|++|++-.
T Consensus 439 ~SPdg~~i~t~a~DETlrfw~~f~ 462 (484)
T KOG0305|consen 439 LSPDGETIVTGAADETLRFWNLFD 462 (484)
T ss_pred ECCCCCEEEEecccCcEEeccccC
Confidence 99 567899999999999999874
No 483
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.89 E-value=8.5e-22 Score=216.12 Aligned_cols=255 Identities=18% Similarity=0.251 Sum_probs=208.7
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCC--ccc------c-cceEe--ecCCCCeEEEEEecCCCCEEE
Q 001548 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDS--VDV------Y-YPAVE--MSNRSKLSCVCWNNYIKNYLA 845 (1056)
Q Consensus 777 ~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~--~~~------~-~~~~~--~~h~~~V~~l~~~~~~~~~La 845 (1056)
.|.-+|+|++++|++++.++++.+++|.=|++.+..... ... + .+... ..|...+.+++.+++ +.+||
T Consensus 140 ~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~D-gkyla 218 (479)
T KOG0299|consen 140 KHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSD-GKYLA 218 (479)
T ss_pred cccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCC-CcEEE
Confidence 678889999999999999999999999999987632110 000 1 01111 278899999999999 99999
Q ss_pred EEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEE-eCCCCeEEEEEccC
Q 001548 846 SADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATI-KNIANVCCVQFSAH 924 (1056)
Q Consensus 846 Sgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~-~~~~~V~sv~fsp~ 924 (1056)
+|+.|..|.|||..+.+.++.|++|.+.|.+++|-. ....+.++|.|.+|++|++.....+.++ .|++.|..|....-
T Consensus 219 tgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~-gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~r 297 (479)
T KOG0299|consen 219 TGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRK-GTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALSR 297 (479)
T ss_pred ecCCCceEEEecCcccchhhcccccccceeeeeeec-CccceeeeecCCceEEEehhHhHHHHHHhCCccceeeechhcc
Confidence 999999999999999999999999999999999998 7888999999999999999987776665 47888999988777
Q ss_pred CCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEec-
Q 001548 925 SSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFS- 1003 (1056)
Q Consensus 925 ~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~- 1003 (1056)
.. .+.+|+.|.++++|++.... ..++.+|.+.+-|++|-++.+++|||.||.|.+|++.+ .+++++..
T Consensus 298 eR-~vtVGgrDrT~rlwKi~ees--qlifrg~~~sidcv~~In~~HfvsGSdnG~IaLWs~~K--------Kkplf~~~~ 366 (479)
T KOG0299|consen 298 ER-CVTVGGRDRTVRLWKIPEES--QLIFRGGEGSIDCVAFINDEHFVSGSDNGSIALWSLLK--------KKPLFTSRL 366 (479)
T ss_pred cc-eEEeccccceeEEEeccccc--eeeeeCCCCCeeeEEEecccceeeccCCceEEEeeecc--------cCceeEeec
Confidence 64 77778899999999995433 46788999999999999999999999999999999983 34555543
Q ss_pred CCC-----------CcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEEeCCCCeEEEEe
Q 001548 1004 GHT-----------NEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSFRTSWGCLLLMV 1055 (1056)
Q Consensus 1004 gH~-----------~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW~v~~~~~~~~~ 1055 (1056)
.|. -+|.++. .-|....++++++++.+++|.+.-|-..+++
T Consensus 367 AHgv~~~~~~~~~~~Witsla-----------~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~ 418 (479)
T KOG0299|consen 367 AHGVIPELDPVNGNFWITSLA-----------VIPGSDLLASGSWSGCVRLWKIEDGLRAINL 418 (479)
T ss_pred cccccCCccccccccceeeeE-----------ecccCceEEecCCCCceEEEEecCCccccce
Confidence 221 1444444 4566778899999999999999998555554
No 484
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.89 E-value=2.8e-23 Score=244.47 Aligned_cols=247 Identities=17% Similarity=0.167 Sum_probs=184.3
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcc
Q 001548 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1056)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1056)
...|||-+|||.. ....+..+...+..+.|...+..-..+.....|||.+.+-..-..... +.+
T Consensus 30 Gtygkv~k~k~~~-------~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~-------~~~-- 93 (953)
T KOG0587|consen 30 GTYGKVYKGRHVK-------TGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDP-------GNG-- 93 (953)
T ss_pred ccceeEEEEeeee-------cCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecC-------CCC--
Confidence 3446666666665 344555555666777777777777788888899998864333211111 111
Q ss_pred cccCCCcccccCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhh
Q 001548 299 CWIGGLRQGSSDHGVNLREWLNA-RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1056)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~-~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~ 377 (1056)
.--+.+||||.||+.-|+++. .+..+.+..+..|++.++.|+.+||.+.|+|||||-.|||++.++.||+.|||++.
T Consensus 94 --DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSa 171 (953)
T KOG0587|consen 94 --DQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSA 171 (953)
T ss_pred --CeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeee
Confidence 114679999999999999965 46678888999999999999999999999999999999999999999999999987
Q ss_pred cccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCC
Q 001548 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1056)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~ 457 (1056)
.+....
T Consensus 172 QldsT~-------------------------------------------------------------------------- 177 (953)
T KOG0587|consen 172 QLDSTV-------------------------------------------------------------------------- 177 (953)
T ss_pred eeeccc--------------------------------------------------------------------------
Confidence 755100
Q ss_pred cccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccC-----CCCCccchhHHHHHHHHHHhCCCCcH
Q 001548 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-----GVCTTSSNIYSLGVLFFELFGRFDSE 532 (1056)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-----~~~t~~sDIwSLGvlL~eLlt~f~~~ 532 (1056)
..-.+.+|||.|||||++.. ..|+..+|+||||++..||--|-++.
T Consensus 178 -----------------------------grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl 228 (953)
T KOG0587|consen 178 -----------------------------GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPL 228 (953)
T ss_pred -----------------------------ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCc
Confidence 00016789999999999975 34788999999999999999763332
Q ss_pred ---HHHHHHHHhhccCCCCCC---CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001548 533 ---RALAAAMSDLRDRILPPS---FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1056)
Q Consensus 533 ---~~~~~~~~~~~~~~lp~~---~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~ 588 (1056)
.....++.+.+.+ ||. +...+.++.+||..||.+|-.+||++.++|+|||+.+.
T Consensus 229 ~DmHPmraLF~IpRNP--PPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~ 288 (953)
T KOG0587|consen 229 CDMHPMRALFLIPRNP--PPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQ 288 (953)
T ss_pred cCcchhhhhccCCCCC--CccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCccccc
Confidence 2223333333332 332 33456778899999999999999999999999999843
No 485
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.89 E-value=5.5e-24 Score=219.92 Aligned_cols=204 Identities=16% Similarity=0.122 Sum_probs=154.1
Q ss_pred hhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccc-cC-CCcccccCCCCCHHHHHH----hcCCCCCHHHHHHHH
Q 001548 262 GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW-IG-GLRQGSSDHGVNLREWLN----ARGHKGKRIECLYIF 335 (1056)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~GgsL~~~l~----~~~~~~~~~~~~~i~ 335 (1056)
-++.++++.-||||.+-.+ || .| .+.-||.+ ..+|..+-+ -....+++...-+|.
T Consensus 113 ~d~~mks~~cp~IVkfyGa------------------~F~EGdcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~It 173 (361)
T KOG1006|consen 113 HDTVMKSSNCPNIVKFYGA------------------LFSEGDCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHIT 173 (361)
T ss_pred HHHHHhhcCCcHHHHHhhh------------------hhcCCceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhhee
Confidence 3677899999999864433 44 23 23345554 456654432 123457777888999
Q ss_pred HHHHHHHHHhhh-cCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhccccccccccccccccc
Q 001548 336 RQIVALVDYHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKK 414 (1056)
Q Consensus 336 ~QIl~gL~ylHs-~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 414 (1056)
..++.||+||-. ..|||||+||+||||+..|.||+||||++-.+.++.+
T Consensus 174 vatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiA------------------------------ 223 (361)
T KOG1006|consen 174 VATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIA------------------------------ 223 (361)
T ss_pred eeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHH------------------------------
Confidence 999999999986 5899999999999999999999999999977653210
Q ss_pred ccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCcccccccccccccccccc
Q 001548 415 QKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLE 494 (1056)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 494 (1056)
.|...|
T Consensus 224 --------------------------------------------------------------------------kT~daG 229 (361)
T KOG1006|consen 224 --------------------------------------------------------------------------KTVDAG 229 (361)
T ss_pred --------------------------------------------------------------------------hhhccC
Confidence 114456
Q ss_pred CCCccCcccccC--CCCCccchhHHHHHHHHHHhCC---CCcHHHHHHHHHhhccCCCCCC-----CCCCChhHHHHHHh
Q 001548 495 EKWYASPEELSG--GVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPS-----FLSENPKEAGFCLW 564 (1056)
Q Consensus 495 t~~Y~APE~l~~--~~~t~~sDIwSLGvlL~eLlt~---f~~~~~~~~~~~~~~~~~lp~~-----~~~~~~~~~~li~~ 564 (1056)
-..|||||.+.. ..|+.+||+||||++|||+.|| +..+......+..+..+..|.. -...+..+..||.-
T Consensus 230 CrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fint 309 (361)
T KOG1006|consen 230 CRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINT 309 (361)
T ss_pred CccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHH
Confidence 777999999975 4589999999999999999986 5566665555555554443322 12467889999999
Q ss_pred ccccCCCCCCCHHHHhhhhhhhhh
Q 001548 565 QLHPEPLSRPTTREILQSEVTNEF 588 (1056)
Q Consensus 565 lL~~dP~~Rpt~~eil~~~~~~~~ 588 (1056)
||.+|-+.||+..+++.+||+...
T Consensus 310 Cl~Kd~~~Rpky~~Lk~~~fyr~y 333 (361)
T KOG1006|consen 310 CLIKDRSDRPKYDDLKKFPFYRMY 333 (361)
T ss_pred HhhcccccCcchhhhhcCchhhhh
Confidence 999999999999999999998764
No 486
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.89 E-value=2.3e-21 Score=201.50 Aligned_cols=213 Identities=22% Similarity=0.352 Sum_probs=177.9
Q ss_pred CCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCC--CCC------cccccceEeecCCCCeEEEEEecCCCCEEEEE
Q 001548 777 NSANVICSISFDR-DEDHFAAAGVSKKIKIFEFNALF--NDS------VDVYYPAVEMSNRSKLSCVCWNNYIKNYLASA 847 (1056)
Q Consensus 777 ~h~~~V~sv~fsp-dg~~latg~~Dg~I~Iwdl~t~~--~~~------~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSg 847 (1056)
-|.+.|+++.+++ .|+++++|+.||.|.|||+.... ..+ ..........+|+-.|.++.|.|-+..+|.++
T Consensus 41 ~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtss 120 (397)
T KOG4283|consen 41 PHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSS 120 (397)
T ss_pred cCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecc
Confidence 6889999999998 48999999999999999998532 111 00011123346888999999999888999999
Q ss_pred ECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecCC--CCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccC
Q 001548 848 DYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVH--PTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAH 924 (1056)
Q Consensus 848 s~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d--~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~ 924 (1056)
+.|.++++||..|-+....|+ .++.|++-+++|.. ..++|+|..|-.|++.|+.+|.+-.++. |...|.+|.|+|.
T Consensus 121 SFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~ 199 (397)
T KOG4283|consen 121 SFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPS 199 (397)
T ss_pred cccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccC
Confidence 999999999999999888887 67889999999853 3568899999999999999999999887 6789999999999
Q ss_pred CCcEEEEEeCCCeEEEEEcCCCCcce--------------EEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEECCCCC
Q 001548 925 SSHLLAFGSADYRTYCYDLRNARAPW--------------CVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTS 989 (1056)
Q Consensus 925 ~~~~lasGs~Dg~V~lwDlr~~~~~~--------------~~l~gH~~~V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~ 989 (1056)
...+||+|+.||.|++||+|...-.. .+-..|.+.|.+++|+ ++.++++++.|..+++|+..++.
T Consensus 200 ~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~ 279 (397)
T KOG4283|consen 200 SEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGR 279 (397)
T ss_pred ceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecccCc
Confidence 99999999999999999999653212 2234678899999998 88899999999999999998655
Q ss_pred C
Q 001548 990 H 990 (1056)
Q Consensus 990 ~ 990 (1056)
.
T Consensus 280 n 280 (397)
T KOG4283|consen 280 N 280 (397)
T ss_pred c
Confidence 4
No 487
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.89 E-value=9.8e-22 Score=205.44 Aligned_cols=222 Identities=19% Similarity=0.325 Sum_probs=192.1
Q ss_pred CCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEe
Q 001548 745 TDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVE 824 (1056)
Q Consensus 745 ~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~ 824 (1056)
+.+++.|.|+++++- +.+ .+.||.+.|+.++......++.|++.|.+.+||.+++ ..+....
T Consensus 125 srivssFk~~t~~~~----------lvr-e~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Es-------g~CL~~Y 186 (481)
T KOG0300|consen 125 SRIVSSFKDGTVKFR----------LVR-ELEGHKDGIWHVAADSTQPICGTASADHTARIWSLES-------GACLATY 186 (481)
T ss_pred chheeeecCCceeEe----------ehh-hhcccccceeeehhhcCCcceeecccccceeEEeecc-------ccceeee
Confidence 445667777775532 111 4679999999999998888999999999999999985 3556677
Q ss_pred ecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEc------CC------------------------------C----ceE
Q 001548 825 MSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDA------CT------------------------------G----QTV 864 (1056)
Q Consensus 825 ~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~------~t------------------------------~----~~v 864 (1056)
.+|.+.|+|++|++. +.++++++.|++-.||.. .. + .++
T Consensus 187 ~GH~GSVNsikfh~s-~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl 265 (481)
T KOG0300|consen 187 TGHTGSVNSIKFHNS-GLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPL 265 (481)
T ss_pred cccccceeeEEeccc-cceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeee
Confidence 899999999999998 899999999999999962 10 0 156
Q ss_pred EEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEEEeCCCeEEEEEc
Q 001548 865 SHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDL 943 (1056)
Q Consensus 865 ~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDl 943 (1056)
..|++|...|.+.+|-. .+..++++|.|.+..+||+.++..+..+. |....+-++-+|... ++++.|.|-+.++||+
T Consensus 266 ~~ltgH~~vV~a~dWL~-gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQr-LVvTsSrDtTFRLWDF 343 (481)
T KOG0300|consen 266 MRLTGHRAVVSACDWLA-GGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQR-LVVTSSRDTTFRLWDF 343 (481)
T ss_pred eeeeccccceEehhhhc-CcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcce-EEEEeccCceeEeccc
Confidence 67889999999999998 89999999999999999999999999887 567788889999985 9999999999999999
Q ss_pred CCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEECCC
Q 001548 944 RNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKR 987 (1056)
Q Consensus 944 r~~~~~~~~l~gH~~~V~~l~fs~~~~L~SgS~Dg~IkiWdl~~ 987 (1056)
|..-..+.+|.||+..|+++.|..+..++|||.|.+||+||+++
T Consensus 344 ReaI~sV~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvKvWdLrN 387 (481)
T KOG0300|consen 344 REAIQSVAVFQGHTDTVTSVVFNTDDRVVSGSDDRTVKVWDLRN 387 (481)
T ss_pred hhhcceeeeecccccceeEEEEecCCceeecCCCceEEEeeecc
Confidence 96656688999999999999999888999999999999999985
No 488
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.88 E-value=1.4e-21 Score=210.89 Aligned_cols=253 Identities=17% Similarity=0.270 Sum_probs=204.7
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001548 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1056)
Q Consensus 774 ~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V 853 (1056)
.+..|++.|+-+.|+++|++|||++.|.+..||++... . .........+|...|.-+.|+|+ .++|++|+.|..+
T Consensus 219 il~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d---~-~~kl~~tlvgh~~~V~yi~wSPD-dryLlaCg~~e~~ 293 (519)
T KOG0293|consen 219 ILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYD---V-HFKLKKTLVGHSQPVSYIMWSPD-DRYLLACGFDEVL 293 (519)
T ss_pred hHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecC---c-ceeeeeeeecccCceEEEEECCC-CCeEEecCchHhe
Confidence 35689999999999999999999999999999998641 1 12233455689999999999999 8899999999999
Q ss_pred EEEEcCCCceEEEEe-cCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEeC--CCCeEEEEEccCCCcEEE
Q 001548 854 KLWDACTGQTVSHYI-EHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKN--IANVCCVQFSAHSSHLLA 930 (1056)
Q Consensus 854 ~lWD~~t~~~v~~~~-~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~~--~~~V~sv~fsp~~~~~la 930 (1056)
++||+.+|.+...|. +|...+.|++|.| |+..|++|+.|+++..||+.. ..+...+. ...|.+++.++||. .++
T Consensus 294 ~lwDv~tgd~~~~y~~~~~~S~~sc~W~p-Dg~~~V~Gs~dr~i~~wdlDg-n~~~~W~gvr~~~v~dlait~Dgk-~vl 370 (519)
T KOG0293|consen 294 SLWDVDTGDLRHLYPSGLGFSVSSCAWCP-DGFRFVTGSPDRTIIMWDLDG-NILGNWEGVRDPKVHDLAITYDGK-YVL 370 (519)
T ss_pred eeccCCcchhhhhcccCcCCCcceeEEcc-CCceeEecCCCCcEEEecCCc-chhhcccccccceeEEEEEcCCCc-EEE
Confidence 999999999988885 3468899999999 999999999999999999974 33434332 35699999999998 555
Q ss_pred EEeCCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcE
Q 001548 931 FGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEK 1009 (1056)
Q Consensus 931 sGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~V 1009 (1056)
+.+.|..|++|+...... .... ....+|+++..+ ++.++++-=.+..|.+||+. ....++.+.||.-..
T Consensus 371 ~v~~d~~i~l~~~e~~~d-r~li-se~~~its~~iS~d~k~~LvnL~~qei~LWDl~--------e~~lv~kY~Ghkq~~ 440 (519)
T KOG0293|consen 371 LVTVDKKIRLYNREARVD-RGLI-SEEQPITSFSISKDGKLALVNLQDQEIHLWDLE--------ENKLVRKYFGHKQGH 440 (519)
T ss_pred EEecccceeeechhhhhh-hccc-cccCceeEEEEcCCCcEEEEEcccCeeEEeecc--------hhhHHHHhhcccccc
Confidence 566899999999876543 2222 335689999999 77777777789999999998 557888999997654
Q ss_pred EEEEecCCcceeeEEe-eCCCCEEEEEEcCCcEEEEeCCCCeEEE
Q 001548 1010 VGICRLEHNLFPFTIF-NLSDCWLLLVCFDFTTLSFRTSWGCLLL 1053 (1056)
Q Consensus 1010 v~ls~~~~~~~~~~~~-s~~g~~l~s~s~D~~v~iW~v~~~~~~~ 1053 (1056)
.-+. +|| +.+..++++||-|.+|.||+-..|.++.
T Consensus 441 fiIr---------SCFgg~~~~fiaSGSED~kvyIWhr~sgkll~ 476 (519)
T KOG0293|consen 441 FIIR---------SCFGGGNDKFIASGSEDSKVYIWHRISGKLLA 476 (519)
T ss_pred eEEE---------eccCCCCcceEEecCCCceEEEEEccCCceeE
Confidence 2222 245 4455889999999999999999887764
No 489
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.88 E-value=1.6e-21 Score=200.69 Aligned_cols=261 Identities=16% Similarity=0.164 Sum_probs=211.4
Q ss_pred CCCcccccccccccccccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEE
Q 001548 715 SDSTTRADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHF 794 (1056)
Q Consensus 715 ~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~l 794 (1056)
|-+.+.+.+-+++||.+.|-++.. ++.....++++.|.++++||..+++++..++. ..+|..+.|+++|+++
T Consensus 37 w~s~nGerlGty~GHtGavW~~Di--d~~s~~liTGSAD~t~kLWDv~tGk~la~~k~------~~~Vk~~~F~~~gn~~ 108 (327)
T KOG0643|consen 37 WYSLNGERLGTYDGHTGAVWCCDI--DWDSKHLITGSADQTAKLWDVETGKQLATWKT------NSPVKRVDFSFGGNLI 108 (327)
T ss_pred EEecCCceeeeecCCCceEEEEEe--cCCcceeeeccccceeEEEEcCCCcEEEEeec------CCeeEEEeeccCCcEE
Confidence 334455667889999998877765 56777888999999999999999999988874 5689999999999988
Q ss_pred EEEeC-----CCcEEEEEcCCCCCCCccccc-ceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCc-eEEEE
Q 001548 795 AAAGV-----SKKIKIFEFNALFNDSVDVYY-PAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQ-TVSHY 867 (1056)
Q Consensus 795 atg~~-----Dg~I~Iwdl~t~~~~~~~~~~-~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~-~v~~~ 867 (1056)
+.+.. .+.|.+|++.....+ ..... ......+.++++.+-|.|. +..|++|..||.|.+||+++|+ .+..-
T Consensus 109 l~~tD~~mg~~~~v~~fdi~~~~~~-~~s~ep~~kI~t~~skit~a~Wg~l-~~~ii~Ghe~G~is~~da~~g~~~v~s~ 186 (327)
T KOG0643|consen 109 LASTDKQMGYTCFVSVFDIRDDSSD-IDSEEPYLKIPTPDSKITSALWGPL-GETIIAGHEDGSISIYDARTGKELVDSD 186 (327)
T ss_pred EEEehhhcCcceEEEEEEccCChhh-hcccCceEEecCCccceeeeeeccc-CCEEEEecCCCcEEEEEcccCceeeech
Confidence 87663 467999998742211 12222 2344567799999999998 8999999999999999999984 66666
Q ss_pred ecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEeCCCCeEEEEEccCCCcEEEEEeCCCe-EEEEEcCCC
Q 001548 868 IEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYR-TYCYDLRNA 946 (1056)
Q Consensus 868 ~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~~~~~V~sv~fsp~~~~~lasGs~Dg~-V~lwDlr~~ 946 (1056)
+.|...|+.++|++ +..+|+|||.|.+.++||+++-.+++++....+|++.+++|...++++.|+.+-. |.-=+.|.+
T Consensus 187 ~~h~~~Ind~q~s~-d~T~FiT~s~Dttakl~D~~tl~v~Kty~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~G 265 (327)
T KOG0643|consen 187 EEHSSKINDLQFSR-DRTYFITGSKDTTAKLVDVRTLEVLKTYTTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAG 265 (327)
T ss_pred hhhccccccccccC-CcceEEecccCccceeeeccceeeEEEeeecccccceecccccceEEecCCceeeeeeeeccccc
Confidence 88999999999999 9999999999999999999999999999999999999999998867776665422 333333333
Q ss_pred C-----------cceEEecCCCCCeEEEEEcC-CCEEEEEECCCeEEEEECC
Q 001548 947 R-----------APWCVLAGHEKAVSYVKFLD-SGTLVTASTDNKLKLWDLK 986 (1056)
Q Consensus 947 ~-----------~~~~~l~gH~~~V~~l~fs~-~~~L~SgS~Dg~IkiWdl~ 986 (1056)
+ ..+...+||-++|++|+|+| +...+||+.||.||+.-+.
T Consensus 266 KFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd 317 (327)
T KOG0643|consen 266 KFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFD 317 (327)
T ss_pred chhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEEec
Confidence 2 12456789999999999995 5558899999999998665
No 490
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.88 E-value=3.6e-22 Score=230.09 Aligned_cols=247 Identities=21% Similarity=0.291 Sum_probs=189.6
Q ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecC---CCCeEEEEEecCCCCEEEEEECCCcEEEEE
Q 001548 781 VICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSN---RSKLSCVCWNNYIKNYLASADYDGVVKLWD 857 (1056)
Q Consensus 781 ~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h---~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD 857 (1056)
...+|+..++-..++.+|.. ..+||.++... ..........+. ...+.+|.|+....++|||++..|.|-+||
T Consensus 41 ~~nAIs~nr~~~qiv~AGrs-~lklyai~~~~---~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWd 116 (839)
T KOG0269|consen 41 KANAISVNRDINQIVVAGRS-LLKLYAINPND---FSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWD 116 (839)
T ss_pred ccceEeecCCcceeEEeccc-ceeeEeeCccc---CCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEe
Confidence 34566677888888888854 78999887411 111111111111 123456889876689999999999999999
Q ss_pred cCC---CceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEeCC-CCeEEEEEccCCCcEEEEEe
Q 001548 858 ACT---GQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNI-ANVCCVQFSAHSSHLLAFGS 933 (1056)
Q Consensus 858 ~~t---~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~~~-~~V~sv~fsp~~~~~lasGs 933 (1056)
+.. .+.+..|.+|+..+++++|++..+.+|+|||.||+||+||+|..+...++..+ ..|..|+|+|.-.+.|+++.
T Consensus 117 lnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~ 196 (839)
T KOG0269|consen 117 LNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIH 196 (839)
T ss_pred cCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEec
Confidence 987 56777899999999999999999999999999999999999999988888754 56999999999888999999
Q ss_pred CCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcC-CCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCC-CcEEE
Q 001548 934 ADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLD-SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHT-NEKVG 1011 (1056)
Q Consensus 934 ~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs~-~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~-~~Vv~ 1011 (1056)
+.|.+++||+|....+...+.+|.++|.++.|+| ..+||||+.|++|+|||...... ..+ ..-|+ .+|..
T Consensus 197 dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~------~~~--~tInTiapv~r 268 (839)
T KOG0269|consen 197 DSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRA------KPK--HTINTIAPVGR 268 (839)
T ss_pred CCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCc------cce--eEEeecceeee
Confidence 9999999999999988888999999999999994 56799999999999999973211 111 12222 23333
Q ss_pred EEecCCcceeeEEeeCCCCEE-EEEE--cCCcEEEEeCCCCe
Q 001548 1012 ICRLEHNLFPFTIFNLSDCWL-LLVC--FDFTTLSFRTSWGC 1050 (1056)
Q Consensus 1012 ls~~~~~~~~~~~~s~~g~~l-~s~s--~D~~v~iW~v~~~~ 1050 (1056)
+. |-|...+. ++++ .|..|.|||+.-.+
T Consensus 269 Vk-----------WRP~~~~hLAtcsmv~dtsV~VWDvrRPY 299 (839)
T KOG0269|consen 269 VK-----------WRPARSYHLATCSMVVDTSVHVWDVRRPY 299 (839)
T ss_pred ee-----------eccCccchhhhhhccccceEEEEeecccc
Confidence 33 66666554 4443 88889999986443
No 491
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.88 E-value=1.1e-22 Score=229.01 Aligned_cols=236 Identities=14% Similarity=0.108 Sum_probs=169.1
Q ss_pred cceeeeCCCCCccccccccccccccccccCCchh-HHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCCCCccccc
Q 001548 223 KGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDA-ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWI 301 (1056)
Q Consensus 223 ~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (1056)
+|.|-...-..++++ +++..++..-.+. ..--+.++.|.+++||||+.+..+...|.+.++
T Consensus 551 FGEVhLCeveg~lkV------AVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicm------------ 612 (807)
T KOG1094|consen 551 FGEVHLCEVEGPLKV------AVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCM------------ 612 (807)
T ss_pred cceeEEEEecCceEE------EEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHH------------
Confidence 377776665444444 2222332222221 112233678899999999999999888887773
Q ss_pred CCCcccccCCCCCHHHHHHhcCCCC-CHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhccc
Q 001548 302 GGLRQGSSDHGVNLREWLNARGHKG-KRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1056)
Q Consensus 302 ~~~~~~~~~~GgsL~~~l~~~~~~~-~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~ 380 (1056)
++||++.|+|.+||....... +.....+|+.||+.|++||.+-++|||||-|.|+|++.++++||+|||++|.+-
T Consensus 613 ----I~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~ly 688 (807)
T KOG1094|consen 613 ----ITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLY 688 (807)
T ss_pred ----HHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccc
Confidence 899999999999997764433 555788899999999999999999999999999999999999999999998654
Q ss_pred ccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCccc
Q 001548 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1056)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~ 460 (1056)
.-.. +++ +
T Consensus 689 sg~y-----------------------------------------------------------y~v-------------q 696 (807)
T KOG1094|consen 689 SGDY-----------------------------------------------------------YRV-------------Q 696 (807)
T ss_pred cCCc-----------------------------------------------------------eee-------------e
Confidence 1000 000 0
Q ss_pred ccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhC-----CCCcHHHH
Q 001548 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-----RFDSERAL 535 (1056)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt-----~f~~~~~~ 535 (1056)
-..+-...|||||.|.-+++++++|+|++|++|||+++ ||..-...
T Consensus 697 -----------------------------gr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e 747 (807)
T KOG1094|consen 697 -----------------------------GRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE 747 (807)
T ss_pred -----------------------------cceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH
Confidence 02333456999999999999999999999999999873 23222111
Q ss_pred HH---HHHhhcc---CCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001548 536 AA---AMSDLRD---RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1056)
Q Consensus 536 ~~---~~~~~~~---~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~ 581 (1056)
.. .-.-+++ ...++.+.-++.++.++++.|+..|-.+||+++++..
T Consensus 748 ~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~ 799 (807)
T KOG1094|consen 748 QVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHL 799 (807)
T ss_pred HHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence 11 1111222 1233455566778889999999999999999999854
No 492
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.88 E-value=1.5e-22 Score=231.43 Aligned_cols=246 Identities=15% Similarity=0.080 Sum_probs=176.4
Q ss_pred ccccceeeeCCCCCccccccccccc-ccccccc----CCchhHHHHhhhhhhccCCCCCCCcccceeeecCCCCCCcCCC
Q 001548 220 LKGKGIVCRGPPLNAFKERRGMIDT-KAFVTTT----MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTG 294 (1056)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (1056)
.+-+|||.||.+.+ +. ...++. ++-++.. ...|..+++ ..|-++.||+.+++-.++.. .+..
T Consensus 120 ~GsFgvV~rg~Wt~--ps-gk~V~VAVKclr~d~l~~~mddflrEa---s~M~~L~H~hliRLyGvVl~-qp~m------ 186 (1039)
T KOG0199|consen 120 EGSFGVVKRGTWTQ--PS-GKHVNVAVKCLRDDSLNAIMDDFLREA---SHMLKLQHPHLIRLYGVVLD-QPAM------ 186 (1039)
T ss_pred CcceeeEeeccccC--CC-CcEEeEEEEeccCCccchhHHHHHHHH---HHHHhccCcceeEEeeeecc-chhh------
Confidence 34679999998853 11 111111 1111211 222333333 46788899999987666443 2211
Q ss_pred CCcccccCCCcccccCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCc
Q 001548 295 VPASCWIGGLRQGSSDHGVNLREWLNA-RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGP 373 (1056)
Q Consensus 295 ~~~~~~~~~~~~~~~~~GgsL~~~l~~-~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Df 373 (1056)
.++|.+++|+|.+.|.+ ....+.-.....|+.||+.|+.||.++++|||||-..|+||.....|||+||
T Consensus 187 ----------MV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DF 256 (1039)
T KOG0199|consen 187 ----------MVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDF 256 (1039)
T ss_pred ----------HHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecc
Confidence 18899999999999977 3344555577789999999999999999999999999999999999999999
Q ss_pred chhhcccccccCCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCC
Q 001548 374 IIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPH 453 (1056)
Q Consensus 374 gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~ 453 (1056)
||.|.++..+. +..
T Consensus 257 GLmRaLg~ned--------------------~Yv---------------------------------------------- 270 (1039)
T KOG0199|consen 257 GLMRALGENED--------------------MYV---------------------------------------------- 270 (1039)
T ss_pred cceeccCCCCc--------------------ceE----------------------------------------------
Confidence 99998773210 000
Q ss_pred CCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCC----C
Q 001548 454 SHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR----F 529 (1056)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~----f 529 (1056)
... ..---..|+|||.|....++.++|+|++||+|||||+. +
T Consensus 271 -----m~p-----------------------------~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW 316 (1039)
T KOG0199|consen 271 -----MAP-----------------------------QRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPW 316 (1039)
T ss_pred -----ecC-----------------------------CCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCC
Confidence 000 00112249999999999999999999999999999973 3
Q ss_pred CcHHHHHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001548 530 DSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1056)
Q Consensus 530 ~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eil~~~~~~~~~ 589 (1056)
.+... .+.+..+..+...+....++.++.+++..||..+|.+|||+..|....+..+..
T Consensus 317 ~G~~g-~qIL~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l~eaq 375 (1039)
T KOG0199|consen 317 VGCRG-IQILKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAEAQ 375 (1039)
T ss_pred CCCCH-HHHHHhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHHhcC
Confidence 33322 334444556666677778899999999999999999999999998776665543
No 493
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.88 E-value=4e-23 Score=218.39 Aligned_cols=180 Identities=18% Similarity=0.157 Sum_probs=141.2
Q ss_pred cccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccCCcEEEeCcchhhccccccc
Q 001548 305 RQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESAS 384 (1056)
Q Consensus 305 ~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~ 384 (1056)
.+.||..||+|--.+.+ +++++++.++.|...|+.||.|||++|||.||||.+|+||+..|++|++|+|++++-..++
T Consensus 328 fvieyv~ggdlmfhmqr-qrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~g- 405 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPG- 405 (593)
T ss_pred EEEEEecCcceeeehhh-hhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCC-
Confidence 47899999999876644 4567777999999999999999999999999999999999999999999999998744211
Q ss_pred CCCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCccccccc
Q 001548 385 LDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTN 464 (1056)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~ 464 (1056)
T Consensus 406 -------------------------------------------------------------------------------- 405 (593)
T KOG0695|consen 406 -------------------------------------------------------------------------------- 405 (593)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCCCCcH---------HH-
Q 001548 465 AGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSE---------RA- 534 (1056)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~f~~~---------~~- 534 (1056)
...++.+|||.|.|||++.|..|++++|+|+|||++|||+.|-.++ .+
T Consensus 406 ----------------------d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~nt 463 (593)
T KOG0695|consen 406 ----------------------DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNT 463 (593)
T ss_pred ----------------------cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccch
Confidence 0112789999999999999999999999999999999999752221 11
Q ss_pred HHHHHHhhccCCCCCCCCCCChhHHHHHHhccccCCCCCCC------HHHHhhhhhhhhhh
Q 001548 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT------TREILQSEVTNEFQ 589 (1056)
Q Consensus 535 ~~~~~~~~~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt------~~eil~~~~~~~~~ 589 (1056)
.......+..+.+ ..+.+.+-+...++...|.+||..|.. ++++..|+||....
T Consensus 464 edylfqvilekqi-riprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~id 523 (593)
T KOG0695|consen 464 EDYLFQVILEKQI-RIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSID 523 (593)
T ss_pred hHHHHHHHhhhcc-cccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCC
Confidence 1122222222211 112345778889999999999999953 58999999998653
No 494
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.88 E-value=6.1e-22 Score=206.83 Aligned_cols=255 Identities=18% Similarity=0.262 Sum_probs=206.6
Q ss_pred ccccccccccccccceeeecccccCCCCc--EEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEE
Q 001548 719 TRADNDLLRDRENLFLAQQDQEIQNPTDR--LGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAA 796 (1056)
Q Consensus 719 ~~~~~~~l~gh~~~v~~~~~~~~~~~~~~--ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~lat 796 (1056)
..+-+++|-.|...|..+.|+ |... ++++.|+++|++|+++...+..+ +......+|.+++|+|.|++|+.
T Consensus 161 ~hPvIRTlYDH~devn~l~FH----Pre~ILiS~srD~tvKlFDfsK~saKrA~---K~~qd~~~vrsiSfHPsGefllv 233 (430)
T KOG0640|consen 161 RHPVIRTLYDHVDEVNDLDFH----PRETILISGSRDNTVKLFDFSKTSAKRAF---KVFQDTEPVRSISFHPSGEFLLV 233 (430)
T ss_pred CCceEeehhhccCcccceeec----chhheEEeccCCCeEEEEecccHHHHHHH---HHhhccceeeeEeecCCCceEEE
Confidence 356778899999999998874 4333 38899999999999875443332 34567889999999999999999
Q ss_pred EeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEe-cCC-CcE
Q 001548 797 AGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYI-EHE-KRA 874 (1056)
Q Consensus 797 g~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~-~H~-~~V 874 (1056)
|..-.++++||+++... ........+|++.|+++.+++. +++.++||.||.|+|||--+++|+.+|. .|. ..|
T Consensus 234 gTdHp~~rlYdv~T~Qc----fvsanPd~qht~ai~~V~Ys~t-~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsev 308 (430)
T KOG0640|consen 234 GTDHPTLRLYDVNTYQC----FVSANPDDQHTGAITQVRYSST-GSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEV 308 (430)
T ss_pred ecCCCceeEEeccceeE----eeecCcccccccceeEEEecCC-ccEEEEeccCCcEEeeccccHHHHHHHHhhcCCcee
Confidence 99999999999986210 0111123478999999999998 9999999999999999999999999985 454 569
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEeCCC------CeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCc
Q 001548 875 WSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIA------NVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARA 948 (1056)
Q Consensus 875 ~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~~~~------~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~ 948 (1056)
.+..|.. ++.+++|.+.|..|++|.+.++.+++.+.+.+ --+...|+....++|.---..+.+..||.|+...
T Consensus 309 cSa~Ftk-n~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr 387 (430)
T KOG0640|consen 309 CSAVFTK-NGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADR 387 (430)
T ss_pred eeEEEcc-CCeEEeecCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhh
Confidence 9999998 99999999999999999999999999887432 1244557777666666555678899999999887
Q ss_pred ceEEecCCCCCeEEEEEcCCC-EEEEEECCCeEEEEECC
Q 001548 949 PWCVLAGHEKAVSYVKFLDSG-TLVTASTDNKLKLWDLK 986 (1056)
Q Consensus 949 ~~~~l~gH~~~V~~l~fs~~~-~L~SgS~Dg~IkiWdl~ 986 (1056)
....-.||.++|.++..+|.+ -++|||.|..+|+|--+
T Consensus 388 ~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWyrr 426 (430)
T KOG0640|consen 388 VALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWYRR 426 (430)
T ss_pred hhhcccCCCCCceEEEeCCCCCceeeecccceeeeeeec
Confidence 544557999999999999654 59999999999999644
No 495
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.88 E-value=2.4e-23 Score=231.37 Aligned_cols=174 Identities=20% Similarity=0.259 Sum_probs=136.1
Q ss_pred cCCCCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHhhhcCcccccCCCCCEEEccC-CcEEEeCcchhhcccccccC
Q 001548 309 SDHGVNLREWLNARGHK--GKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS-NQVKYIGPIIQKETLESASL 385 (1056)
Q Consensus 309 ~~~GgsL~~~l~~~~~~--~~~~~~~~i~~QIl~gL~ylHs~gIvHrDLKP~NILl~~~-~~vkl~Dfgla~~~~~~~~~ 385 (1056)
+.--.+|+++|++.|+. +....++.|+.|++.||..|-..||+|.||||+|||+..+ +.+||||||.|....+
T Consensus 514 E~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~e---- 589 (752)
T KOG0670|consen 514 EPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFASE---- 589 (752)
T ss_pred hhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCcccccccc----
Confidence 34567999999998764 5555789999999999999999999999999999999876 5699999998866542
Q ss_pred CCCCCchhhhhhcccccccccccccccccccccccccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccC
Q 001548 386 DIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNA 465 (1056)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~ 465 (1056)
T Consensus 590 -------------------------------------------------------------------------------- 589 (752)
T KOG0670|consen 590 -------------------------------------------------------------------------------- 589 (752)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCccccccccccccccccccCCCccCcccccCCCCCccchhHHHHHHHHHHhCC---CCcHHH--HHHHHH
Q 001548 466 GFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERA--LAAAMS 540 (1056)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGvlL~eLlt~---f~~~~~--~~~~~~ 540 (1056)
..+|.++-+.+|+|||+|.|.+|+...|+||+||+||||.|| |++..+ ...++.
T Consensus 590 ---------------------neitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~m 648 (752)
T KOG0670|consen 590 ---------------------NEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFM 648 (752)
T ss_pred ---------------------ccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHH
Confidence 113355667789999999999999999999999999999998 777532 333333
Q ss_pred hhccCC----------------------------------------CCC------------CCCCC----ChhHHHHHHh
Q 001548 541 DLRDRI----------------------------------------LPP------------SFLSE----NPKEAGFCLW 564 (1056)
Q Consensus 541 ~~~~~~----------------------------------------lp~------------~~~~~----~~~~~~li~~ 564 (1056)
.+.+.. ..| .++.. -..+.+|+.+
T Consensus 649 e~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdk 728 (752)
T KOG0670|consen 649 ELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDK 728 (752)
T ss_pred HhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHH
Confidence 333320 000 01111 1336799999
Q ss_pred ccccCCCCCCCHHHHhhhhhhhh
Q 001548 565 QLHPEPLSRPTTREILQSEVTNE 587 (1056)
Q Consensus 565 lL~~dP~~Rpt~~eil~~~~~~~ 587 (1056)
||..||++|.|..++|.||||..
T Consensus 729 ml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 729 MLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred HhccChhhcCCHHHHhcCCcccC
Confidence 99999999999999999999975
No 496
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.88 E-value=7.1e-23 Score=234.08 Aligned_cols=231 Identities=21% Similarity=0.317 Sum_probs=197.0
Q ss_pred ecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEE
Q 001548 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVK 854 (1056)
Q Consensus 775 l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~ 854 (1056)
+..|+..|.++..-..++.+++||.|..+-+|.+... .......+|.+.|-||.|++. ..+|++|+.||+|+
T Consensus 24 ~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp-------~~i~S~~~hespIeSl~f~~~-E~LlaagsasgtiK 95 (825)
T KOG0267|consen 24 FVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKP-------NAITSLTGHESPIESLTFDTS-ERLLAAGSASGTIK 95 (825)
T ss_pred hhhhhhhhceeeeeccceeeccCCCceeeccccccCC-------chhheeeccCCcceeeecCcc-hhhhcccccCCcee
Confidence 4578999999998778899999999999999998741 222236789999999999998 88999999999999
Q ss_pred EEEcCCCceEEEEecCCCcEEEEEEecCCCCEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEEEe
Q 001548 855 LWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGS 933 (1056)
Q Consensus 855 lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~lasGs 933 (1056)
+||+.+++.++++.+|...+.+|+|+| -+.++|+|+.|+.+++||++...|...+. |...|.++.|+|+|. +++.|+
T Consensus 96 ~wDleeAk~vrtLtgh~~~~~sv~f~P-~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr-~v~~g~ 173 (825)
T KOG0267|consen 96 VWDLEEAKIVRTLTGHLLNITSVDFHP-YGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGR-WVASGG 173 (825)
T ss_pred eeehhhhhhhhhhhccccCcceeeecc-ceEEeccccccccceehhhhccCceeeecCCcceeEEEeecCCCc-eeeccC
Confidence 999999999999999999999999999 89999999999999999999999999987 556789999999996 999999
Q ss_pred CCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCCE-EEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEE
Q 001548 934 ADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGT-LVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGI 1012 (1056)
Q Consensus 934 ~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l~fs~~~~-L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~l 1012 (1056)
.|..+++||++.++. ...|.+|+..|.++.|++.++ +++||.|++|++||+++. ..+....+....|.++
T Consensus 174 ed~tvki~d~~agk~-~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletf--------e~I~s~~~~~~~v~~~ 244 (825)
T KOG0267|consen 174 EDNTVKIWDLTAGKL-SKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETF--------EVISSGKPETDGVRSL 244 (825)
T ss_pred Ccceeeeeccccccc-ccccccccccccccccCchhhhhccCCCCceeeeecccee--------EEeeccCCccCCceee
Confidence 999999999998876 688999999999999997766 778999999999999843 3333444455566666
Q ss_pred EecCCcceeeEEeeCCCCEEEEE
Q 001548 1013 CRLEHNLFPFTIFNLSDCWLLLV 1035 (1056)
Q Consensus 1013 s~~~~~~~~~~~~s~~g~~l~s~ 1035 (1056)
. |.++++.++++
T Consensus 245 ~-----------fn~~~~~~~~G 256 (825)
T KOG0267|consen 245 A-----------FNPDGKIVLSG 256 (825)
T ss_pred e-----------ecCCceeeecC
Confidence 6 55555554444
No 497
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.87 E-value=1.4e-20 Score=197.04 Aligned_cols=265 Identities=16% Similarity=0.234 Sum_probs=202.5
Q ss_pred cccceeeecccccCCCCcE-EEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEc
Q 001548 730 ENLFLAQQDQEIQNPTDRL-GAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEF 808 (1056)
Q Consensus 730 ~~~v~~~~~~~~~~~~~~l-s~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl 808 (1056)
++.|.+++|.. .....+ .+|+|+++|+|++..- +.+.......|.++|.+++|+.||..+++|+.|+.+++||+
T Consensus 27 ~DsIS~l~FSP--~~~~~~~A~SWD~tVR~wevq~~---g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL 101 (347)
T KOG0647|consen 27 EDSISALAFSP--QADNLLAAGSWDGTVRIWEVQNS---GQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDL 101 (347)
T ss_pred ccchheeEecc--ccCceEEecccCCceEEEEEecC---CcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEc
Confidence 45677777722 223344 6789999999997652 12222234589999999999999999999999999999999
Q ss_pred CCCCCCCcccccceEeecCCCCeEEEEEecCC-CCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecCCCCEE
Q 001548 809 NALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI-KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKL 887 (1056)
Q Consensus 809 ~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~-~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~~~l 887 (1056)
.+. .......|.+.|.++.|-+.. -..|+|||+|.+||.||.+...++.++. -..+|++++.-. .++
T Consensus 102 ~S~--------Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~-LPeRvYa~Dv~~---pm~ 169 (347)
T KOG0647|consen 102 ASG--------QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQ-LPERVYAADVLY---PMA 169 (347)
T ss_pred cCC--------CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeee-ccceeeehhccC---cee
Confidence 862 334455799999999997652 2489999999999999999999888876 567899998753 478
Q ss_pred EEEeCCCcEEEEECCCCceeE-EEe--CCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCC-cceEEecCCCC-----
Q 001548 888 ASGSDDCSVKLWNINEKNSLA-TIK--NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNAR-APWCVLAGHEK----- 958 (1056)
Q Consensus 888 aSgs~Dg~V~IWDlr~~~~~~-~~~--~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~-~~~~~l~gH~~----- 958 (1056)
+.+..+..|.+|.|+.+.... .+. .+-.+.||+..++.. ..|.|+-.|.+-+..+.... ..-.+|+.|+.
T Consensus 170 vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~-~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~ 248 (347)
T KOG0647|consen 170 VVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKD-GFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVN 248 (347)
T ss_pred EEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCC-ceEeeeecceEEEEecCCCCccCceeEEEeccCCCCC
Confidence 888889999999998765332 222 234589999999987 45889999999888776642 22467788874
Q ss_pred ----CeEEEEEc-CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcce
Q 001548 959 ----AVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLF 1020 (1056)
Q Consensus 959 ----~V~~l~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~ 1020 (1056)
+|++|+|+ -.+.|+|++.||++.+||-. ....+.+...|..+|.+.+++.++-+
T Consensus 249 ~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkd--------ar~kLk~s~~~~qpItcc~fn~~G~i 307 (347)
T KOG0647|consen 249 DDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKD--------ARTKLKTSETHPQPITCCSFNRNGSI 307 (347)
T ss_pred CceEEecceEeecccceEEEecCCceEEEecch--------hhhhhhccCcCCCccceeEecCCCCE
Confidence 68899999 56789999999999999976 33456677788888877775444444
No 498
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.87 E-value=2.8e-20 Score=195.12 Aligned_cols=258 Identities=17% Similarity=0.287 Sum_probs=196.6
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceEeecCCCCeEEEEEecC-CCCEEEEEECCCcEEE
Q 001548 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNY-IKNYLASADYDGVVKL 855 (1056)
Q Consensus 777 ~h~~~V~sv~fspdg~~latg~~Dg~I~Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~-~~~~LaSgs~Dg~V~l 855 (1056)
+|.+-|.++.|++.|+.+|||+.|++|+|||... ++........-..|.+.|..|.|.+. -|+.+|+|++|++++|
T Consensus 11 ~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~---~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~i 87 (361)
T KOG2445|consen 11 GHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTS---DSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSI 87 (361)
T ss_pred CCcceeeeeeecccCceeeeccCCCcEEEEeccC---CCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceee
Confidence 7899999999999999999999999999999853 23334444555679999999999653 3899999999999999
Q ss_pred EEcCC------C---ceEEEEecCCCcEEEEEEecC-CCCEEEEEeCCCcEEEEECCCCceeEE------Ee--------
Q 001548 856 WDACT------G---QTVSHYIEHEKRAWSVDFSQV-HPTKLASGSDDCSVKLWNINEKNSLAT------IK-------- 911 (1056)
Q Consensus 856 WD~~t------~---~~v~~~~~H~~~V~sv~fsp~-d~~~laSgs~Dg~V~IWDlr~~~~~~~------~~-------- 911 (1056)
|.-.. + ....++....+.|++|.|.|. -|-+||+++.||+++||+.-..--+.. +.
T Consensus 88 WEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~ 167 (361)
T KOG2445|consen 88 WEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGK 167 (361)
T ss_pred eeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCccc
Confidence 97521 1 134566667789999999985 356799999999999998765432222 22
Q ss_pred CCCCeEEEEEccCC--CcEEEEEeCC-----CeEEEEEcCCCC-c--ceEEecCCCCCeEEEEEcCC-----CEEEEEEC
Q 001548 912 NIANVCCVQFSAHS--SHLLAFGSAD-----YRTYCYDLRNAR-A--PWCVLAGHEKAVSYVKFLDS-----GTLVTAST 976 (1056)
Q Consensus 912 ~~~~V~sv~fsp~~--~~~lasGs~D-----g~V~lwDlr~~~-~--~~~~l~gH~~~V~~l~fs~~-----~~L~SgS~ 976 (1056)
+.....||.|+|.. ..+||.|+.+ +.++||...... + .+..+.+|..+|+.|+|.|. ..|++|+.
T Consensus 168 ~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~k 247 (361)
T KOG2445|consen 168 NKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATK 247 (361)
T ss_pred ccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeec
Confidence 34567899999753 3488888876 578888765433 1 24567799999999999843 35999999
Q ss_pred CCeEEEEECCCCC----------CCC--CCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcCCcEEEE
Q 001548 977 DNKLKLWDLKRTS----------HTG--PSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFDFTTLSF 1044 (1056)
Q Consensus 977 Dg~IkiWdl~~~~----------~~~--~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D~~v~iW 1044 (1056)
|| |+||.+...- +.. ...-..+..|.+|..+|..++ |...|..|.+.|.||+|++|
T Consensus 248 Dg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~-----------wNmtGtiLsStGdDG~VRLW 315 (361)
T KOG2445|consen 248 DG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVR-----------WNMTGTILSSTGDDGCVRLW 315 (361)
T ss_pred Cc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEE-----------EeeeeeEEeecCCCceeeeh
Confidence 99 9999998311 111 111234566888998998888 88899999999999999999
Q ss_pred eCCCC
Q 001548 1045 RTSWG 1049 (1056)
Q Consensus 1045 ~v~~~ 1049 (1056)
.....
T Consensus 316 kany~ 320 (361)
T KOG2445|consen 316 KANYN 320 (361)
T ss_pred hhhhh
Confidence 86543
No 499
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.87 E-value=2.3e-22 Score=261.85 Aligned_cols=192 Identities=16% Similarity=0.139 Sum_probs=137.5
Q ss_pred hhhhccCCCCCCCcccceeeecCCCCCCcCCCCCcccccCCCcccccCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 001548 263 AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALV 342 (1056)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~QIl~gL 342 (1056)
...+....||||+.+.......... ..+|||++||+|.++++. +++..+..|+.||+.||
T Consensus 734 ~~~l~~l~HpnIv~~~~~~~~~~~~----------------~lv~Ey~~~g~L~~~l~~----l~~~~~~~i~~~ia~~L 793 (968)
T PLN00113 734 IADMGKLQHPNIVKLIGLCRSEKGA----------------YLIHEYIEGKNLSEVLRN----LSWERRRKIAIGIAKAL 793 (968)
T ss_pred HHHHhhCCCCCcceEEEEEEcCCCC----------------EEEEeCCCCCcHHHHHhc----CCHHHHHHHHHHHHHHH
Confidence 4567778999999887664422211 148999999999999963 67778999999999999
Q ss_pred HHhh---hcCcccccCCCCCEEEccCCcEEEeCcchhhcccccccCCCCCCchhhhhhcccccccccccccccccccccc
Q 001548 343 DYHH---TQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNH 419 (1056)
Q Consensus 343 ~ylH---s~gIvHrDLKP~NILl~~~~~vkl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 419 (1056)
+||| +.+|+||||||+||+++.++..++. |+.......
T Consensus 794 ~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~-------------------------------------- 834 (968)
T PLN00113 794 RFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT-------------------------------------- 834 (968)
T ss_pred HHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc--------------------------------------
Confidence 9999 6799999999999999887777764 432211100
Q ss_pred cccccccccccCCCCCCcccccccccccccCCCCCCCCcccccccCCCCCCCCCCCCccccccccccccccccccCCCcc
Q 001548 420 NMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYA 499 (1056)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 499 (1056)
-....||+.|+
T Consensus 835 ---------------------------------------------------------------------~~~~~~t~~y~ 845 (968)
T PLN00113 835 ---------------------------------------------------------------------DTKCFISSAYV 845 (968)
T ss_pred ---------------------------------------------------------------------CCCcccccccc
Confidence 00235788999
Q ss_pred CcccccCCCCCccchhHHHHHHHHHHhCCCCcHH-------HHHHHHHhh---------ccCCCCCCCC---CCChhHHH
Q 001548 500 SPEELSGGVCTTSSNIYSLGVLFFELFGRFDSER-------ALAAAMSDL---------RDRILPPSFL---SENPKEAG 560 (1056)
Q Consensus 500 APE~l~~~~~t~~sDIwSLGvlL~eLlt~f~~~~-------~~~~~~~~~---------~~~~lp~~~~---~~~~~~~~ 560 (1056)
|||++.+..++.++|||||||++|||+++..+.. ....+.... ....+.+... ....++.+
T Consensus 846 aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (968)
T PLN00113 846 APETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMN 925 (968)
T ss_pred CcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHH
Confidence 9999999999999999999999999998733321 111111110 0111111111 11224568
Q ss_pred HHHhccccCCCCCCCHHHHhhh
Q 001548 561 FCLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 561 li~~lL~~dP~~Rpt~~eil~~ 582 (1056)
++.+||+.||.+|||+.|+++.
T Consensus 926 l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 926 LALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred HHHhhCcCCchhCcCHHHHHHH
Confidence 9999999999999999999885
No 500
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.87 E-value=4.1e-20 Score=189.96 Aligned_cols=275 Identities=16% Similarity=0.202 Sum_probs=215.8
Q ss_pred cccccccceeeecccccCCCCcEEEECCCeEEEEEccCceEEeEEEeeeecCCCCCEEEEEEcC-CCCEEEEEeCCCcEE
Q 001548 726 LRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDR-DEDHFAAAGVSKKIK 804 (1056)
Q Consensus 726 l~gh~~~v~~~~~~~~~~~~~~ls~s~D~~ikiw~~~~~~~~~~l~~~~l~~h~~~V~sv~fsp-dg~~latg~~Dg~I~ 804 (1056)
+++|...+.++++. ..+....++++|+++++|++...+.... ....+|.+.|-.++|+| ..+.||+++.|++|+
T Consensus 16 ~~~~~~~v~Sv~wn--~~g~~lasgs~dktv~v~n~e~~r~~~~---~~~~gh~~svdql~w~~~~~d~~atas~dk~ir 90 (313)
T KOG1407|consen 16 LQGHVQKVHSVAWN--CDGTKLASGSFDKTVSVWNLERDRFRKE---LVYRGHTDSVDQLCWDPKHPDLFATASGDKTIR 90 (313)
T ss_pred hhhhhhcceEEEEc--ccCceeeecccCCceEEEEecchhhhhh---hcccCCCcchhhheeCCCCCcceEEecCCceEE
Confidence 45666677777762 2445556889999999999876533222 24569999999999987 467999999999999
Q ss_pred EEEcCCCCCCCcccccceEeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEEecCCCcEEEEEEecCCC
Q 001548 805 IFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHP 884 (1056)
Q Consensus 805 Iwdl~t~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~LaSgs~Dg~V~lWD~~t~~~v~~~~~H~~~V~sv~fsp~d~ 884 (1056)
+||+.. ..+......+..=.-++|+|+ +++++.++.|..|.+.|.++.+.+..++ ....++-++|+- ++
T Consensus 91 ~wd~r~--------~k~~~~i~~~~eni~i~wsp~-g~~~~~~~kdD~it~id~r~~~~~~~~~-~~~e~ne~~w~~-~n 159 (313)
T KOG1407|consen 91 IWDIRS--------GKCTARIETKGENINITWSPD-GEYIAVGNKDDRITFIDARTYKIVNEEQ-FKFEVNEISWNN-SN 159 (313)
T ss_pred EEEecc--------CcEEEEeeccCcceEEEEcCC-CCEEEEecCcccEEEEEecccceeehhc-ccceeeeeeecC-CC
Confidence 999864 222223333444456789998 9999999999999999999988877765 567788999995 66
Q ss_pred CEEEEEeCCCcEEEEECCCCceeEEEe-CCCCeEEEEEccCCCcEEEEEeCCCeEEEEEcCCCCcceEEecCCCCCeEEE
Q 001548 885 TKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYV 963 (1056)
Q Consensus 885 ~~laSgs~Dg~V~IWDlr~~~~~~~~~-~~~~V~sv~fsp~~~~~lasGs~Dg~V~lwDlr~~~~~~~~l~gH~~~V~~l 963 (1056)
.+|.-...-|+|.|...-+-+++++++ |.++..||.|+|+|. +||+|+.|-.+-+||+...-+ ...+.-|.-+|..|
T Consensus 160 d~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~Gr-yfA~GsADAlvSLWD~~ELiC-~R~isRldwpVRTl 237 (313)
T KOG1407|consen 160 DLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGR-YFATGSADALVSLWDVDELIC-ERCISRLDWPVRTL 237 (313)
T ss_pred CEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCc-eEeeccccceeeccChhHhhh-heeeccccCceEEE
Confidence 776666667999999999999999997 778899999999997 999999999999999987655 56778889999999
Q ss_pred EEc-CCCEEEEEECCCeEEEEECCCCCCCCCCCCceeEEecCCCCcEEEEEecCCcceeeEEeeCCCCEEEEEEcC
Q 001548 964 KFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNLFPFTIFNLSDCWLLLVCFD 1038 (1056)
Q Consensus 964 ~fs-~~~~L~SgS~Dg~IkiWdl~~~~~~~~~~~~~~~~~~gH~~~Vv~ls~~~~~~~~~~~~s~~g~~l~s~s~D 1038 (1056)
.|+ ++++|+|||.|..|-|=++. +|..+.... |.++-..++ |+|....|+-++.|
T Consensus 238 SFS~dg~~lASaSEDh~IDIA~ve--------tGd~~~eI~-~~~~t~tVA-----------WHPk~~LLAyA~dd 293 (313)
T KOG1407|consen 238 SFSHDGRMLASASEDHFIDIAEVE--------TGDRVWEIP-CEGPTFTVA-----------WHPKRPLLAYACDD 293 (313)
T ss_pred EeccCcceeeccCccceEEeEecc--------cCCeEEEee-ccCCceeEE-----------ecCCCceeeEEecC
Confidence 999 99999999999999888887 455555443 444445555 77777666665544
Done!