Query 001548
Match_columns 1056
No_of_seqs 690 out of 5366
Neff 7.5
Searched_HMMs 29240
Date Tue Mar 26 18:19:08 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001548.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_844-848//hhsearch_pdb/001548hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fie_A Serine/threonine-protei 1.0 1 1 341.3 15.1 248 215-590 156-409 (423)
2 4g31_A Eukaryotic translation 1.0 1 1 340.2 14.5 270 219-588 14-286 (299)
3 4b9d_A Serine/threonine-protei 1.0 1 1 338.7 13.6 251 214-588 26-283 (350)
4 4fih_A Serine/threonine-protei 1.0 1 1 338.4 16.7 247 216-590 80-332 (346)
5 4g3f_A NF-kappa-beta-inducing 1.0 1 1 332.2 9.2 239 218-582 66-310 (336)
6 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 331.5 11.2 252 213-588 33-297 (311)
7 3fpq_A Serine/threonine-protei 1.0 1 1 327.9 15.6 248 217-587 33-288 (290)
8 3ubd_A Ribosomal protein S6 ki 1.0 1 1 327.2 12.7 254 212-588 24-288 (304)
9 1vyh_C Platelet-activating fac 1.0 1 1 324.8 40.1 291 721-1047 99-410 (410)
10 3uto_A Twitchin; kinase, muscl 1.0 1 1 321.0 14.8 252 214-590 159-419 (573)
No 1
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=341.25 Aligned_cols=248 Identities=18% Similarity=0.197 Sum_probs=184.0
Q ss_pred HHHHHCCCCCEEEECCCC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCC
Q ss_conf 885302566046408999-8431233322333344556770468788431202057999987522103305877888678
Q 001548 215 FVKTTLKGKGIVCRGPPL-NAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGART 293 (1056)
Q Consensus 215 ~~k~~~~g~Gvv~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (1056)
+-+...|++|+||++... ++..+ +.|.. ...-......-...+.+++...||||+.+.+....+....
T Consensus 156 ~~~iG~G~fG~V~~a~~~~tg~~v-----AiK~i-~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~----- 224 (423)
T 4fie_A 156 FIKIGEGSTGIVCIATVRSSGKLV-----AVKKM-DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELW----- 224 (423)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEE-----EEEEE-ESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEE-----
T ss_pred EEEECCCCCCEEEEEEECCCCCEE-----EEEEE-ECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEE-----
T ss_conf 169624818489999999999899-----99998-6255468999999999998579989871689999899999-----
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEECC
Q ss_conf 88963335897545568998789999844999887899999999999999964438211358998779823893898283
Q 001548 294 GVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGP 373 (1056)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~G~sL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIiHrDLkP~Nill~~~~~vki~df 373 (1056)
++||||+||+|.++++.. .+++.+++.|++||+.||+|||++||+||||||+||||+.++.+||+||
T Consensus 225 -----------iVmEy~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DF 291 (423)
T 4fie_A 225 -----------VVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDF 291 (423)
T ss_dssp -----------EEEECCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCC
T ss_pred -----------EEEECCCCCCHHHHHHCC--CCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCCCEEEECC
T ss_conf -----------999698998289887616--9899999999999999999999889044657877789858999898037
Q ss_pred CHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10100012234789987115664010000001124332110002456665543345678778854456656545667788
Q 001548 374 IIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPH 453 (1056)
Q Consensus 374 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 453 (1056)
|+++.+....
T Consensus 292 Gla~~~~~~~---------------------------------------------------------------------- 301 (423)
T 4fie_A 292 GFCAQVSKEV---------------------------------------------------------------------- 301 (423)
T ss_dssp TTCEECCSSC----------------------------------------------------------------------
T ss_pred CCCEECCCCC----------------------------------------------------------------------
T ss_conf 2654777887----------------------------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC---CC
Q ss_conf 889965445557888777899875422000244231232457776684243688789311167899999988079---99
Q 001548 454 SHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FD 530 (1056)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvlL~eLl~~---f~ 530 (1056)
...+..+||++|||||++.+..|+.++|||||||+||||++| |.
T Consensus 302 ---------------------------------~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~ 348 (423)
T 4fie_A 302 ---------------------------------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF 348 (423)
T ss_dssp ---------------------------------CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred ---------------------------------CCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
T ss_conf ---------------------------------64346664747279999779999968999999999999997879989
Q ss_pred CHHHHHHHHHHHCCCCC--CCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 08999999982115789--9977999946999998512349999989899966111001110
Q 001548 531 SERALAAAMSDLRDRIL--PPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1056)
Q Consensus 531 ~~~~~~~~~~~l~~~~l--p~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eiL~h~~f~~~~e 590 (1056)
+....... ..+..... .+.+...++.+.+|+.+||++||.+|||+.|+|+||||.....
T Consensus 349 ~~~~~~~~-~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~~ 409 (423)
T 4fie_A 349 NEPPLKAM-KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 409 (423)
T ss_dssp TSCHHHHH-HHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred CCCHHHHH-HHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCCC
T ss_conf 86999999-99972799887650129999999999986789568909999960987568999
No 2
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=1.00 E-value=1 Score=340.17 Aligned_cols=270 Identities=23% Similarity=0.296 Sum_probs=195.2
Q ss_pred HCCCCCEEEECCCC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
Q ss_conf 02566046408999-84312333223333445567704687884312020579999875221033058778886788896
Q 001548 219 TLKGKGIVCRGPPL-NAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1056)
Q Consensus 219 ~~~g~Gvv~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1056)
..||+|+||++... ++.. .+.|.............-...+..+....||||+.+.+..................
T Consensus 14 G~G~fg~V~~a~~~~~~~~-----vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~ 88 (299)
T 4g31_A 14 GRGGFGVVFEAKNKVDDCN-----YAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKV 88 (299)
T ss_dssp EECC--EEEEEEETTTCCE-----EEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CE
T ss_pred ECCCCEEEEEEEECCCCCE-----EEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCC
T ss_conf 1288939999999899979-----99999953578789999999999998678989873988998368642122567774
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEECCCH
Q ss_conf 3335897545568998789999844999--88789999999999999996443821135899877982389389828310
Q 001548 298 SCWIGGLRQGSSDHGVNLREWLNARGHK--GKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (1056)
Q Consensus 298 ~~~~~~~~~~~~~~G~sL~~~l~~~~~~--~~~~~~~~i~~qil~~l~~lHs~gIiHrDLkP~Nill~~~~~vki~dfg~ 375 (1056)
. -..+||+|+|++|.+++...... .+...++.|++||+.||+|+|++||+||||||+|||++.++.+|++|||+
T Consensus 89 ~----l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGl 164 (299)
T 4g31_A 89 Y----LYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL 164 (299)
T ss_dssp E----EEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred E----EEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEECCCCC
T ss_conf 7----999993679990999997258997667999999999999999999988694354768996787999589804704
Q ss_pred HHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10001223478998711566401000000112433211000245666554334567877885445665654566778888
Q 001548 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1056)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1056)
++.+..........
T Consensus 165 a~~~~~~~~~~~~~------------------------------------------------------------------ 178 (299)
T 4g31_A 165 VTAMDQDEEEQTVL------------------------------------------------------------------ 178 (299)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred CEECCCCCCCCCCC------------------------------------------------------------------
T ss_conf 65657875322213------------------------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 99654455578887778998754220002442312324577766842436887893111678999999880799908999
Q 001548 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL 535 (1056)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvlL~eLl~~f~~~~~~ 535 (1056)
.........+..+||++|||||++.+..|+.++|||||||+||||++||.+....
T Consensus 179 -------------------------~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~Pf~~~~~~ 233 (299)
T 4g31_A 179 -------------------------TPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMER 233 (299)
T ss_dssp --------------------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHSCCSSHHHH
T ss_pred -------------------------CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHH
T ss_conf -------------------------4555433457766682413999986999897899998999999981699986279
Q ss_pred HHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 99998211578999779999469999985123499999898999661110011
Q 001548 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1056)
Q Consensus 536 ~~~~~~l~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eiL~h~~f~~~ 588 (1056)
...+..++...+|+.+...+|.+.+|+.+||++||.+|||+.++++||||.+.
T Consensus 234 ~~~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 286 (299)
T 4g31_A 234 VRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDL 286 (299)
T ss_dssp HHHHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC
T ss_pred HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCC
T ss_conf 99999985689998876469899999999868996689199999619855789
No 3
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=338.74 Aligned_cols=251 Identities=18% Similarity=0.170 Sum_probs=188.2
Q ss_pred HHHHHHC--CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCC
Q ss_conf 8885302--56604640899984312333223333445567704-68788431202057999987522103305877888
Q 001548 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD-AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1056)
Q Consensus 214 ~~~k~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1056)
|-+.+.+ ||+|+||++.... . +...+.|.......... ...-...+.++...+||||+.+.+....+....
T Consensus 26 Y~~~~~lG~G~fg~V~~a~~~~--~--~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~y-- 99 (350)
T 4b9d_A 26 YVRLQKIGEGSFGKAILVKSTE--D--GRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLY-- 99 (350)
T ss_dssp EEEEEEC------CEEEEEETT--T--CCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE--
T ss_pred EEEEEEEECCCCEEEEEEEECC--C--CCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEE--
T ss_conf 5884797027793999999889--9--989999998658789799999999999998779989891999999899999--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEE
Q ss_conf 67888963335897545568998789999844-99988789999999999999996443821135899877982389389
Q 001548 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1056)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~G~sL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIiHrDLkP~Nill~~~~~vk 369 (1056)
.+||||+||+|.++|... +..+++..++.|++||+.||+|+|++||+||||||+||||+.++.+|
T Consensus 100 --------------iVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vK 165 (350)
T 4b9d_A 100 --------------IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQ 165 (350)
T ss_dssp --------------EEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEE
T ss_pred --------------EEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECCCCCEE
T ss_conf --------------999488998399999973899997899999999999999999989915135978997987899989
Q ss_pred EECCCHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 82831010001223478998711566401000000112433211000245666554334567877885445665654566
Q 001548 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1056)
Q Consensus 370 i~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1056)
++|||+++.+....
T Consensus 166 l~DFGla~~~~~~~------------------------------------------------------------------ 179 (350)
T 4b9d_A 166 LGDFGIARVLNSTV------------------------------------------------------------------ 179 (350)
T ss_dssp ECSTTEESCCCHHH------------------------------------------------------------------
T ss_pred ECCCCCCEEECCCC------------------------------------------------------------------
T ss_conf 76465214406885------------------------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC-
Q ss_conf 7788889965445557888777899875422000244231232457776684243688789311167899999988079-
Q 001548 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR- 528 (1056)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvlL~eLl~~- 528 (1056)
...+..+||++|||||++.+..|+.++|||||||+||||++|
T Consensus 180 -------------------------------------~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~ 222 (350)
T 4b9d_A 180 -------------------------------------ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK 222 (350)
T ss_dssp -------------------------------------HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred -------------------------------------CCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf -------------------------------------4101457883603999987999895999999999999999787
Q ss_pred --CCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf --990899999998211578999779999469999985123499999898999661110011
Q 001548 529 --FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1056)
Q Consensus 529 --f~~~~~~~~~~~~l~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eiL~h~~f~~~ 588 (1056)
|.+.......... ....+|+.....++.+.+|+.+||++||.+|||+.++|+||||...
T Consensus 223 ~PF~~~~~~~~~~~i-~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 223 HAFEAGSMKNLVLKI-ISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp CSCCCSSHHHHHHHH-HHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred CCCCCCCHHHHHHHH-HCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHHCC
T ss_conf 998996999999999-8089999975579999999999855896679089999639976167
No 4
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=338.41 Aligned_cols=247 Identities=17% Similarity=0.191 Sum_probs=183.3
Q ss_pred HHHHCCCCCEEEECCCC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCC
Q ss_conf 85302566046408999-84312333223333445567704687884312020579999875221033058778886788
Q 001548 216 VKTTLKGKGIVCRGPPL-NAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTG 294 (1056)
Q Consensus 216 ~k~~~~g~Gvv~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (1056)
-+-..|++|+||++... ++..++-+.+. +... ...+ .-...+.++....||||+.+......+....
T Consensus 80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~---~~~~-~~~~--~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~------ 147 (346)
T 4fih_A 80 IKIGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQ-QRRE--LLFNEVVIMRDYQHENVVEMYNSYLVGDELW------ 147 (346)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEE---GGGC-SSGG--GGHHHHHHHHHCCCTTBCCEEEEEEETTEEE------
T ss_pred EEEECCCCEEEEEEEECCCCCEEEEEEEE---CCCH-HHHH--HHHHHHHHHHHCCCCCCCCEEEEEEECCEEE------
T ss_conf 79602728299999998999899999985---2765-6899--9999999998679989991999999899999------
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEECCC
Q ss_conf 89633358975455689987899998449998878999999999999999644382113589987798238938982831
Q 001548 295 VPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPI 374 (1056)
Q Consensus 295 ~~~~~~~~~~~~~~~~~G~sL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIiHrDLkP~Nill~~~~~vki~dfg 374 (1056)
++||||+||+|.+++... .+++.+++.|++||+.||+|||++||+||||||+||||+.++.+|++|||
T Consensus 148 ----------ivmEy~~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFG 215 (346)
T 4fih_A 148 ----------VVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFG 215 (346)
T ss_dssp ----------EEECCCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCT
T ss_pred ----------EEEECCCCCCHHHHHHCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEECCC
T ss_conf ----------999698998089998718--98999999999999999999998883556278899788799988990275
Q ss_pred HHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 01000122347899871156640100000011243321100024566655433456787788544566565456677888
Q 001548 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (1056)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 454 (1056)
+++.+...
T Consensus 216 la~~~~~~------------------------------------------------------------------------ 223 (346)
T 4fih_A 216 FCAQVSKE------------------------------------------------------------------------ 223 (346)
T ss_dssp TCEECCSS------------------------------------------------------------------------
T ss_pred CCEECCCC------------------------------------------------------------------------
T ss_conf 75366788------------------------------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC---CCC
Q ss_conf 89965445557888777899875422000244231232457776684243688789311167899999988079---990
Q 001548 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDS 531 (1056)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvlL~eLl~~---f~~ 531 (1056)
....+..+||++|||||++.+..|+.++|||||||+||||++| |.+
T Consensus 224 -------------------------------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~ 272 (346)
T 4fih_A 224 -------------------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 272 (346)
T ss_dssp -------------------------------SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred -------------------------------CCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf -------------------------------7753465627582799997799999689999999999999978799898
Q ss_pred HHHHHHHHHHHCCCCC--CCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 8999999982115789--9977999946999998512349999989899966111001110
Q 001548 532 ERALAAAMSDLRDRIL--PPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1056)
Q Consensus 532 ~~~~~~~~~~l~~~~l--p~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eiL~h~~f~~~~e 590 (1056)
....... ..+..... .+.+...++.+.+|+.+||++||.+|||+.|+|+||||.....
T Consensus 273 ~~~~~~~-~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~~ 332 (346)
T 4fih_A 273 EPPLKAM-KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 332 (346)
T ss_dssp SCHHHHH-HHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred CCHHHHH-HHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCCC
T ss_conf 5999999-99971799988750229999999999986799568909999960986568999
No 5
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=1.00 E-value=1 Score=332.18 Aligned_cols=239 Identities=15% Similarity=0.084 Sum_probs=171.8
Q ss_pred HHCCCCCEEEECCCC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
Q ss_conf 302566046408999-8431233322333344556770468788431202057999987522103305877888678889
Q 001548 218 TTLKGKGIVCRGPPL-NAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1056)
Q Consensus 218 ~~~~g~Gvv~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1056)
...+|+|+||++... ++.. .+.|......+. .+ ...++....||||+.+......+....
T Consensus 66 lG~G~fG~Vy~a~~~~~g~~-----vAiK~i~~~~~~---~~---E~~il~~l~HpnIV~l~~~~~~~~~~~-------- 126 (336)
T 4g3f_A 66 VGRGSFGEVHRMKDKQTGFQ-----CAVKKVRLEVFR---VE---ELVACAGLSSPRIVPLYGAVREGPWVN-------- 126 (336)
T ss_dssp EEEETTEEEEEEEETTTCCE-----EEEEEEETTTCC---TH---HHHTTTTCCCTTBCCEEEEEEETTEEE--------
T ss_pred ECCCCCEEEEEEEECCCCCE-----EEEEEECHHHHH---HH---HHHHHHHCCCCCCCCEEEEEEECCEEE--------
T ss_conf 51387809999998899989-----999997888869---99---999998579989993999999899999--------
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCC-CEEEECCCH
Q ss_conf 6333589754556899878999984499988789999999999999996443821135899877982389-389828310
Q 001548 297 ASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN-QVKYIGPII 375 (1056)
Q Consensus 297 ~~~~~~~~~~~~~~~G~sL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIiHrDLkP~Nill~~~~-~vki~dfg~ 375 (1056)
++||||+||+|.++|+..++ +++.+++.|++||+.||+|+|++||+||||||+|||++.++ .+|++|||+
T Consensus 127 --------ivmEy~~gg~L~~~l~~~~~-l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGl 197 (336)
T 4g3f_A 127 --------IFMELLEGGSLGQLIKQMGC-LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGH 197 (336)
T ss_dssp --------EEECCCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTT
T ss_pred --------EEEECCCCCCHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHEEEECCCCEEEEEECCC
T ss_conf --------99966599869999987699-999999999999999999999889042616778879958999799962787
Q ss_pred HHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10001223478998711566401000000112433211000245666554334567877885445665654566778888
Q 001548 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1056)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1056)
++.+......
T Consensus 198 a~~~~~~~~~---------------------------------------------------------------------- 207 (336)
T 4g3f_A 198 ALCLQPDGLG---------------------------------------------------------------------- 207 (336)
T ss_dssp CEEC----------------------------------------------------------------------------
T ss_pred CEECCCCCCC----------------------------------------------------------------------
T ss_conf 7685678765----------------------------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC---CCCH
Q ss_conf 9965445557888777899875422000244231232457776684243688789311167899999988079---9908
Q 001548 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSE 532 (1056)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvlL~eLl~~---f~~~ 532 (1056)
.........+||++|||||++.+..|+.++|||||||+||||++| |...
T Consensus 208 ----------------------------~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~ 259 (336)
T 4g3f_A 208 ----------------------------KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQY 259 (336)
T ss_dssp ----------------------------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTT
T ss_pred ----------------------------CCEECCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf ----------------------------4022178545580200899988999890899999999999999786998998
Q ss_pred HHHHHHHHHHCCCC-CCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 99999998211578-999779999469999985123499999898999661
Q 001548 533 RALAAAMSDLRDRI-LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1056)
Q Consensus 533 ~~~~~~~~~l~~~~-lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eiL~h 582 (1056)
.............. ++..+...++.+.+|+.+||++||.+|||+.|+++|
T Consensus 260 ~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~ 310 (336)
T 4g3f_A 260 FRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRK 310 (336)
T ss_dssp CCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 999999999808998002586679999999999762897689599999999
No 6
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=331.49 Aligned_cols=252 Identities=15% Similarity=0.137 Sum_probs=183.3
Q ss_pred HHHHHHHCC--CCCEEEECCCC--CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCC
Q ss_conf 688853025--66046408999--84312333223333445567704687884312020579999875221033058778
Q 001548 213 EFFVKTTLK--GKGIVCRGPPL--NAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLD 288 (1056)
Q Consensus 213 ~~~~k~~~~--g~Gvv~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1056)
.|-+.+.++ ++|+||++... +..++ -+.+....... .... .+-.....++....||||+.+......+....
T Consensus 33 dy~i~~~lG~G~fg~V~~a~~~~~~~~~A-iK~i~k~~~~~-~~~~--~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~y 108 (311)
T 4aw0_A 33 DFKFGKILGEGSFSTVVLARELATSREYA-IKILEKRHIIK-ENKV--PYVTRERDVMSRLDHPFFVKLYFTFQDDEKLY 108 (311)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTCCEEE-EEEEEHHHHHH-TTCH--HHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred CCEEEEEEECCCCEEEEEEEECCCCCEEE-EEEEEHHHCCC-HHHH--HHHHHHHHHHHHCCCCCCCEEEEEEEECCEEE
T ss_conf 36898898316484999999999998999-99988888779-7899--99999999998679989891999997389899
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCE
Q ss_conf 88678889633358975455689987899998449998878999999999999999644382113589987798238938
Q 001548 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368 (1056)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~G~sL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIiHrDLkP~Nill~~~~~v 368 (1056)
.+||+|+||+|.++|...+. +++.+++.|++||+.||+|+|++||+||||||+|||++.++.+
T Consensus 109 ----------------ivmEy~~gG~L~~~i~~~~~-l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~v 171 (311)
T 4aw0_A 109 ----------------FGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI 171 (311)
T ss_dssp ----------------EEECCCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCE
T ss_pred ----------------EEEECCCCCCHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCE
T ss_conf ----------------99964899899999987499-9999999999999999999998878268787899698589888
Q ss_pred EEECCCHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98283101000122347899871156640100000011243321100024566655433456787788544566565456
Q 001548 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1056)
Q Consensus 369 ki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1056)
|++|||+++.+....
T Consensus 172 Kl~DFGla~~~~~~~----------------------------------------------------------------- 186 (311)
T 4aw0_A 172 QITDFGTAKVLSPES----------------------------------------------------------------- 186 (311)
T ss_dssp EECCCTTCEECCTTT-----------------------------------------------------------------
T ss_pred EEEECCCCEECCCCC-----------------------------------------------------------------
T ss_conf 998768750257787-----------------------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 67788889965445557888777899875422000244231232457776684243688789311167899999988079
Q 001548 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR 528 (1056)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvlL~eLl~~ 528 (1056)
......+.+||++|||||++.+..|+.++|||||||+||||++|
T Consensus 187 ------------------------------------~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G 230 (311)
T 4aw0_A 187 ------------------------------------KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230 (311)
T ss_dssp ------------------------------------TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHS
T ss_pred ------------------------------------CCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf ------------------------------------76543675568030799897689999689899899999999749
Q ss_pred ---CCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHH------HHHHHHHHHH
Q ss_conf ---99089999999821157899977999946999998512349999989899------9661110011
Q 001548 529 ---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE------ILQSEVTNEF 588 (1056)
Q Consensus 529 ---f~~~~~~~~~~~~l~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~e------iL~h~~f~~~ 588 (1056)
|.+..........+....-.| ...++.+.+|+.+||++||.+|||+.| +++||||...
T Consensus 231 ~~PF~~~~~~~~~~~i~~~~~~~p--~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~i 297 (311)
T 4aw0_A 231 LPPFRAGNEGLIFAKIIKLEYDFP--EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297 (311)
T ss_dssp SCSSCCSSHHHHHHHHHHTCCCCC--TTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHCCCCHHHCCCHHHHCCCHHHHCCCCCCCC
T ss_conf 899899799999999971999999--6569999999999762897578096797587798779875898
No 7
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=1.00 E-value=1 Score=327.90 Aligned_cols=248 Identities=14% Similarity=0.087 Sum_probs=181.2
Q ss_pred HHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCC
Q ss_conf 53025660464089998431233322333344556770-46878843120205799998752210330587788867888
Q 001548 217 KTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS-DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGV 295 (1056)
Q Consensus 217 k~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1056)
+-..||+|+||++..... ....+.+......... +..+-...+.++....||||+.+.+.........
T Consensus 33 ~iG~G~fg~Vy~a~~~~~----~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~------- 101 (290)
T 3fpq_A 33 EIGRGSFKTVYKGLDTET----TVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGK------- 101 (290)
T ss_dssp EEEECSSEEEEEEEETTT----CCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTE-------
T ss_pred EEECCCCCEEEEEEECCC----CEEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC-------
T ss_conf 970073859999998899----909999998325479899999999999998679989991988996436788-------
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCCCCEEECC-CCCEEEEC
Q ss_conf 963335897545568998789999844999887899999999999999964438--211358998779823-89389828
Q 001548 296 PASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQG--VTFLDLKPSSFKLLQ-SNQVKYIG 372 (1056)
Q Consensus 296 ~~~~~~~~~~~~~~~~G~sL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~g--IiHrDLkP~Nill~~-~~~vki~d 372 (1056)
... ..+||+|+||+|.++|+..+ .+++..++.|++||+.||.|+|++| |+||||||+|||++. ++.+|++|
T Consensus 102 ~~~-----~lvmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~D 175 (290)
T 3fpq_A 102 KCI-----VLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGD 175 (290)
T ss_dssp EEE-----EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECC
T ss_pred CEE-----EEEEECCCCCCHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHEEEECCCCCEEEEE
T ss_conf 689-----99994879789999998669-999999999999999999999977998871645742665888999889972
Q ss_pred CCHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 31010001223478998711566401000000112433211000245666554334567877885445665654566778
Q 001548 373 PIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIP 452 (1056)
Q Consensus 373 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 452 (1056)
||+++....
T Consensus 176 FGla~~~~~----------------------------------------------------------------------- 184 (290)
T 3fpq_A 176 LGLATLKRA----------------------------------------------------------------------- 184 (290)
T ss_dssp TTGGGGCCT-----------------------------------------------------------------------
T ss_pred CCCCEECCC-----------------------------------------------------------------------
T ss_conf 768876798-----------------------------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC---C
Q ss_conf 8889965445557888777899875422000244231232457776684243688789311167899999988079---9
Q 001548 453 HSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---F 529 (1056)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvlL~eLl~~---f 529 (1056)
...+..+||++|||||++.+ .|+.++|||||||+||||+++ |
T Consensus 185 ----------------------------------~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf 229 (290)
T 3fpq_A 185 ----------------------------------SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPY 229 (290)
T ss_dssp ----------------------------------TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred ----------------------------------CCCCCCCCCCCCCCHHHCCC-CCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf ----------------------------------76677624802018978079-9992788887999999999788999
Q ss_pred CCHHHHHHHHHHHCCCCCCCCCC-CCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 90899999998211578999779-99946999998512349999989899966111001
Q 001548 530 DSERALAAAMSDLRDRILPPSFL-SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1056)
Q Consensus 530 ~~~~~~~~~~~~l~~~~lp~~~~-~~~~~~~~li~~lL~~dP~~Rpt~~eiL~h~~f~~ 587 (1056)
.........+..+.....|+.+. ..++.+.+|+.+||++||.+|||+.++|+||||.+
T Consensus 230 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~ 288 (290)
T 3fpq_A 230 SECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp TTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred CCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCC
T ss_conf 99981999999997389987777657899999999976389657919999956904058
No 8
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=1.00 E-value=1 Score=327.15 Aligned_cols=254 Identities=18% Similarity=0.198 Sum_probs=183.7
Q ss_pred HHHHHHHHCC--CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCC
Q ss_conf 0688853025--66046408999843123332233334455677-04687884312020579999875221033058778
Q 001548 212 SEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLD 288 (1056)
Q Consensus 212 ~~~~~k~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1056)
+.|-+.+.++ |+|+||++.....-.. +...+.|........ .+..+-.....++....||||+.+......+....
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~-~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 102 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDA-RQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY 102 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTT-TCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred CCCEEEEEEECCCCEEEEEEEECCCCCC-CEEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEE
T ss_conf 5658988972188839999998558878-979999998157768478999999999998779979990999999899999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCE
Q ss_conf 88678889633358975455689987899998449998878999999999999999644382113589987798238938
Q 001548 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368 (1056)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~G~sL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIiHrDLkP~Nill~~~~~v 368 (1056)
.+||+|+||+|.++|...+. +++.+++.|++||+.||+|+|++||+||||||+|||++.++.+
T Consensus 103 ----------------ivmEy~~gg~L~~~l~~~~~-l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~v 165 (304)
T 3ubd_A 103 ----------------LILDFLRGGDLFTRLSKEVM-FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHI 165 (304)
T ss_dssp ----------------EEECCCTTCEEHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCE
T ss_pred ----------------EEEECCCCCCHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCE
T ss_conf ----------------99975799888999975599-9999999999999999999997799588887899578689988
Q ss_pred EEECCCHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98283101000122347899871156640100000011243321100024566655433456787788544566565456
Q 001548 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1056)
Q Consensus 369 ki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1056)
|++|||+++...+..
T Consensus 166 Kl~DFGla~~~~~~~----------------------------------------------------------------- 180 (304)
T 3ubd_A 166 KLTDFGLSKESIDHE----------------------------------------------------------------- 180 (304)
T ss_dssp EEESSEEEEC----------------------------------------------------------------------
T ss_pred EECCCCCCEECCCCC-----------------------------------------------------------------
T ss_conf 762366343326887-----------------------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 67788889965445557888777899875422000244231232457776684243688789311167899999988079
Q 001548 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR 528 (1056)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvlL~eLl~~ 528 (1056)
...+..+||++|||||++.+..|+.++|||||||+||||++|
T Consensus 181 --------------------------------------~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG 222 (304)
T 3ubd_A 181 --------------------------------------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222 (304)
T ss_dssp --------------------------------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHS
T ss_pred --------------------------------------CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHC
T ss_conf --------------------------------------630454418150799996568878777636119999999859
Q ss_pred ---CCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCH-----HHHHHHHHHHHH
Q ss_conf ---990899999998211578999779999469999985123499999898-----999661110011
Q 001548 529 ---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT-----REILQSEVTNEF 588 (1056)
Q Consensus 529 ---f~~~~~~~~~~~~l~~~~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~-----~eiL~h~~f~~~ 588 (1056)
|.+..........++.... .+...++.+.+|+.+||++||.+|||+ .++++||||...
T Consensus 223 ~~PF~~~~~~~~~~~i~~~~~~--~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i 288 (304)
T 3ubd_A 223 TLPFQGKDRKETMTMILKAKLG--MPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI 288 (304)
T ss_dssp SCSSCCSSHHHHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred CCCCCCCCHHHHHHHHHCCCCC--CCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCC
T ss_conf 8998984999999999718999--98768999999999986469878799986789999769040378
No 9
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=1.00 E-value=1 Score=324.76 Aligned_cols=291 Identities=21% Similarity=0.305 Sum_probs=256.6
Q ss_pred CCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCEEEEEECCCCEEEEEEEEEEECCCCCCEEEEEECCCCCEEEEEECC
Q ss_conf 34410002223200110233459998499887991999984674498689742102899889999996999999999679
Q 001548 721 ADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVS 800 (1056)
Q Consensus 721 ~~~~~l~gh~~~v~~~~~~~~~~~~~~ls~s~Dg~ikiw~~~~~~~~~~l~~~~l~~h~~~V~si~fspdg~~latgs~D 800 (1056)
+....+.+|...|.++++.. .....++++.|+++++|++.+.+....+ .+|...|.+++|+|++++|++|+.|
T Consensus 99 ~~~~~l~gh~~~V~~~~~~p--~~~~l~s~s~Dg~i~vwd~~~~~~~~~l-----~~h~~~V~~v~~~~~~~~l~sgs~D 171 (410)
T 1vyh_C 99 PEKYALSGHRSPVTRVIFHP--VFSVMVSASEDATIKVWDYETGDFERTL-----KGHTDSVQDISFDHSGKLLASCSAD 171 (410)
T ss_dssp SCSCEEECCSSCEEEEEECS--SSSEEEEEESSSCEEEEETTTCCCCEEE-----CCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCEEEECCCCCCEEEEEECC--CCCEEEEEECCCEEEEEECCCCCEEEEE-----ECCCCCEEEEEECCCCCEEEEEECC
T ss_conf 73076616677689999969--9998999938985999989999377888-----1667868789985999999999189
Q ss_pred CCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCEEEEEEE
Q ss_conf 92999984788788754113417616999738999926999899999879929999948895489970378848999980
Q 001548 801 KKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFS 880 (1056)
Q Consensus 801 g~IkIwd~~t~~~~~~~~~~~~~~~~h~~~I~~i~f~p~~~~~LaSgs~Dg~IriWDi~t~~~i~~~~~H~~~V~sv~fs 880 (1056)
++|++|++.+. .......+|...|.+++|+|+ +.+|++|+.|++|++||+.++.++..+.+|...|.++.|+
T Consensus 172 ~~i~iwd~~~~-------~~~~~~~~h~~~V~~v~~~p~-~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~ 243 (410)
T 1vyh_C 172 MTIKLWDFQGF-------ECIRTMHGHDHNVSSVSIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243 (410)
T ss_dssp SCCCEEETTSS-------CEEECCCCCSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred CEEEEEECCCC-------CEEEEECCCCCCEEEEEEECC-CCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEEC
T ss_conf 81999958998-------266998289997789999679-9999999689969999899994899992788628999998
Q ss_pred CCCCCEEEEEECCCCEEEEECCCCCEEEEEE-CCCCEEEEEECCCC-------------------CCEEEEEECCCEEEE
Q ss_conf 3999989998289919999779996358981-79876999992299-------------------909999967984999
Q 001548 881 QVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHS-------------------SHLLAFGSADYRTYC 940 (1056)
Q Consensus 881 p~dg~~LaSgs~Dg~I~IWDlr~~~~i~~~~-~~~~V~sv~fsp~~-------------------~~~lasGs~Dg~I~i 940 (1056)
+ ++.+|++|+.|++|++||++++.+...+. |...|.+++|+|++ ..++++|+.|+.|++
T Consensus 244 ~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~i 322 (410)
T 1vyh_C 244 Q-DGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKM 322 (410)
T ss_dssp T-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEE
T ss_pred C-CCCEEEEECCCCEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCEEEEEECCCEEEE
T ss_conf 9-999999991899099998989743667337874589999858655431012125555566788889999938984999
Q ss_pred EECCCCCCCEEEECCCCCCEEEEEEC-CCCEEEEEECCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCC
Q ss_conf 98589974528953889986899983-99979999889919999879999889988851289628899689999059952
Q 001548 941 YDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKVGICRLEHNL 1019 (1056)
Q Consensus 941 wDlrs~~~~~~~l~gH~~~V~~i~fs-~~~~LvSgS~Dg~IkiWDl~~~~~~~~~~~~~i~tl~gH~~~Vv~ls~~~~~i 1019 (1056)
||+++... +..+.+|...|.++.|+ ++.+|++|+.|++|++||+. .+.++.++.+|.+.|.+++
T Consensus 323 wd~~~~~~-~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~--------~~~~~~~~~~h~~~v~~l~------ 387 (410)
T 1vyh_C 323 WDVSTGMC-LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK--------NKRCMKTLNAHEHFVTSLD------ 387 (410)
T ss_dssp EETTTTEE-EEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCT--------TSCCCEEEECCSSCEEEEE------
T ss_pred EECCCCCE-EEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECC--------CCCEEEEECCCCCCEEEEE------
T ss_conf 98899966-99997788858999994998999999597929999899--------9906899847778689999------
Q ss_pred EEEEEEECCCCEEEEEECCCCEEEEECC
Q ss_conf 0138760799999999928919999489
Q 001548 1020 FPFTIFNLSDCWLLLVCFDFTTLSFRTS 1047 (1056)
Q Consensus 1020 ~~~~~~s~~~~~lis~s~D~~i~iW~v~ 1047 (1056)
|++++.++++++.|+++++|+..
T Consensus 388 -----~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 388 -----FHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp -----ECSSSSCEEEEETTSEEEEEC--
T ss_pred -----ECCCCCEEEEEECCCCEEEEECC
T ss_conf -----82899999999279948997379
No 10
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=1.00 E-value=1 Score=320.97 Aligned_cols=252 Identities=19% Similarity=0.148 Sum_probs=185.3
Q ss_pred HHHHHHC--CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCC
Q ss_conf 8885302--56604640899984312333223333445567704687884312020579999875221033058778886
Q 001548 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1056)
Q Consensus 214 ~~~k~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1056)
|-+.+.+ |++|+||++.... . +...+.|.. ......+...-.....++....||||+.+......+....
T Consensus 159 Y~i~~~lG~G~fg~V~~~~~~~--t--g~~~AiK~i-~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~--- 230 (573)
T 3uto_A 159 YDIHEELGTGAFGVVHRVTERA--T--GNNFAAKFV-MTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMV--- 230 (573)
T ss_dssp EEEEEEEEEETTEEEEEEEETT--T--CCEEEEEEE-ECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEE---
T ss_pred CEEEEEEEECCCEEEEEEEECC--C--CCEEEEEEE-ECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEE---
T ss_conf 1898899616484999999988--9--989999999-1524205999999999998689989894999999899889---
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCC--CCEE
Q ss_conf 78889633358975455689987899998449998878999999999999999644382113589987798238--9389
Q 001548 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS--NQVK 369 (1056)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~G~sL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIiHrDLkP~Nill~~~--~~vk 369 (1056)
.+||+|+||+|.++|......+++.+++.|++||+.||.|||++||+||||||+|||++.. +.+|
T Consensus 231 -------------iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vK 297 (573)
T 3uto_A 231 -------------MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELK 297 (573)
T ss_dssp -------------EEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEE
T ss_pred -------------EEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHCCCCCCCCCCEE
T ss_conf -------------9986069995999999867999999999999999999999998892305687655121478889789
Q ss_pred EECCCHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 82831010001223478998711566401000000112433211000245666554334567877885445665654566
Q 001548 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1056)
Q Consensus 370 i~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1056)
++|||+++.+...
T Consensus 298 l~DFG~a~~~~~~------------------------------------------------------------------- 310 (573)
T 3uto_A 298 LIDFGLTAHLDPK------------------------------------------------------------------- 310 (573)
T ss_dssp ECCCSSCEECCTT-------------------------------------------------------------------
T ss_pred EEECCCEEECCCC-------------------------------------------------------------------
T ss_conf 9406630685699-------------------------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC-
Q ss_conf 7788889965445557888777899875422000244231232457776684243688789311167899999988079-
Q 001548 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR- 528 (1056)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvlL~eLl~~- 528 (1056)
..+...+||++|||||++.+..|+.++|||||||+||||++|
T Consensus 311 -------------------------------------~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~ 353 (573)
T 3uto_A 311 -------------------------------------QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGL 353 (573)
T ss_dssp -------------------------------------SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSC
T ss_pred -------------------------------------CCEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf -------------------------------------8232347794514999968999896999999999999999787
Q ss_pred --CCCHHHHHHHHHHHCCC--CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf --99089999999821157--899977999946999998512349999989899966111001110
Q 001548 529 --FDSERALAAAMSDLRDR--ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1056)
Q Consensus 529 --f~~~~~~~~~~~~l~~~--~lp~~~~~~~~~~~~li~~lL~~dP~~Rpt~~eiL~h~~f~~~~e 590 (1056)
|.+.............. ..++.+...++.+.+|+.+||++||.+|||+.++|+||||.....
T Consensus 354 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~ 419 (573)
T 3uto_A 354 SPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA 419 (573)
T ss_dssp CSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCC
T ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCCCCC
T ss_conf 997986999999999848999895324689999999999886489568929999953957487989
Done!