Query 001552
Match_columns 1055
No_of_seqs 257 out of 392
Neff 3.0
Searched_HMMs 46136
Date Fri Mar 29 03:38:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001552.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001552hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2116 Protein involved in pl 100.0 3E-134 6E-139 1134.0 36.7 258 797-1054 475-738 (738)
2 COG5083 SMP2 Uncharacterized p 100.0 4E-94 8.7E-99 783.7 29.4 244 801-1050 327-576 (580)
3 PF08235 LNS2: LNS2 (Lipin/Ned 100.0 1.3E-58 2.7E-63 455.8 13.9 157 854-1010 1-157 (157)
4 smart00775 LNS2 LNS2 domain. T 100.0 6.5E-43 1.4E-47 340.0 15.0 156 854-1009 1-156 (157)
5 PF04571 Lipin_N: lipin, N-ter 100.0 3.7E-38 7.9E-43 295.6 8.2 93 1-96 1-94 (110)
6 COG4850 Uncharacterized conser 99.3 1.1E-11 2.4E-16 135.2 12.5 172 816-1001 127-308 (373)
7 PF09949 DUF2183: Uncharacteri 98.9 6.6E-09 1.4E-13 97.3 9.5 94 898-1001 1-95 (100)
8 PHA02530 pseT polynucleotide k 98.9 2.3E-09 4.9E-14 112.0 7.0 178 807-995 108-292 (300)
9 cd01427 HAD_like Haloacid deha 98.7 1.2E-07 2.7E-12 83.3 9.5 128 854-994 1-135 (139)
10 TIGR01675 plant-AP plant acid 98.6 3.8E-07 8.3E-12 96.3 11.5 128 850-1001 75-221 (229)
11 TIGR01689 EcbF-BcbF capsule bi 98.4 8.5E-07 1.8E-11 86.2 9.2 107 853-969 2-121 (126)
12 TIGR01680 Veg_Stor_Prot vegeta 98.4 1.3E-06 2.8E-11 94.7 10.1 127 851-1001 100-248 (275)
13 PRK11009 aphA acid phosphatase 98.4 8.5E-07 1.9E-11 93.7 7.7 123 853-1000 64-212 (237)
14 PF03767 Acid_phosphat_B: HAD 98.3 2.7E-07 5.9E-12 96.3 1.1 135 850-1000 70-220 (229)
15 TIGR01533 lipo_e_P4 5'-nucleot 98.1 1E-05 2.2E-10 87.0 9.1 116 850-990 73-206 (266)
16 TIGR01662 HAD-SF-IIIA HAD-supe 98.0 3.9E-05 8.5E-10 71.5 9.3 121 853-995 1-127 (132)
17 TIGR01672 AphA HAD superfamily 97.8 0.0001 2.3E-09 78.1 10.7 122 853-998 64-210 (237)
18 TIGR01491 HAD-SF-IB-PSPlk HAD- 97.8 0.00014 3.1E-09 70.9 10.5 108 882-1009 82-196 (201)
19 TIGR00338 serB phosphoserine p 97.7 0.00015 3.2E-09 72.6 8.3 109 881-1007 86-199 (219)
20 TIGR01664 DNA-3'-Pase DNA 3'-p 97.5 0.00048 1E-08 68.8 10.0 129 850-995 11-158 (166)
21 PLN02954 phosphoserine phospha 97.5 0.00038 8.2E-09 69.9 8.2 100 882-994 86-191 (224)
22 TIGR00213 GmhB_yaeD D,D-heptos 97.4 0.0009 2E-08 66.2 9.2 130 853-995 2-146 (176)
23 PRK10976 putative hydrolase; P 97.3 0.00081 1.7E-08 69.6 8.9 65 853-937 3-67 (266)
24 TIGR01656 Histidinol-ppas hist 97.3 0.00069 1.5E-08 65.4 7.6 126 853-994 1-140 (147)
25 PRK08942 D,D-heptose 1,7-bisph 97.3 0.0017 3.8E-08 64.2 10.2 129 852-994 3-142 (181)
26 TIGR01670 YrbI-phosphatas 3-de 97.2 0.00085 1.8E-08 65.7 7.5 120 853-1007 2-124 (154)
27 PRK13582 thrH phosphoserine ph 97.2 0.0012 2.5E-08 65.5 8.1 94 882-994 70-166 (205)
28 PRK09484 3-deoxy-D-manno-octul 97.1 0.0012 2.6E-08 66.3 7.2 110 851-994 20-134 (183)
29 TIGR01489 DKMTPPase-SF 2,3-dik 97.1 0.0022 4.7E-08 61.9 8.2 100 882-993 74-183 (188)
30 PRK15126 thiamin pyrimidine py 97.0 0.0025 5.4E-08 66.5 8.6 66 853-938 3-68 (272)
31 TIGR01261 hisB_Nterm histidino 97.0 0.0038 8.2E-08 62.4 9.3 129 852-995 1-143 (161)
32 PRK10513 sugar phosphate phosp 96.9 0.0028 6.1E-08 65.6 8.0 70 852-938 3-72 (270)
33 TIGR01488 HAD-SF-IB Haloacid D 96.9 0.0028 6.1E-08 60.9 7.3 98 882-991 75-177 (177)
34 COG0560 SerB Phosphoserine pho 96.9 0.0033 7E-08 65.6 8.2 115 882-1010 79-194 (212)
35 PRK09552 mtnX 2-hydroxy-3-keto 96.9 0.003 6.4E-08 64.4 7.5 96 881-993 75-181 (219)
36 TIGR01487 SPP-like sucrose-pho 96.8 0.0024 5.2E-08 64.5 6.6 49 853-912 2-50 (215)
37 PF08282 Hydrolase_3: haloacid 96.7 0.0037 8.1E-08 61.5 7.1 52 855-917 1-52 (254)
38 PRK11133 serB phosphoserine ph 96.7 0.0037 8.1E-08 69.0 7.8 111 882-1008 183-296 (322)
39 PRK01158 phosphoglycolate phos 96.7 0.0036 7.7E-08 63.1 6.8 49 853-912 4-52 (230)
40 COG0561 Cof Predicted hydrolas 96.7 0.0038 8.2E-08 64.8 7.0 80 852-952 3-82 (264)
41 PRK10530 pyridoxal phosphate ( 96.7 0.006 1.3E-07 62.8 8.2 69 852-940 3-71 (272)
42 PRK10444 UMP phosphatase; Prov 96.7 0.0032 7E-08 66.7 6.3 68 853-935 2-69 (248)
43 TIGR01663 PNK-3'Pase polynucle 96.6 0.008 1.7E-07 70.7 9.6 127 850-992 166-304 (526)
44 TIGR02463 MPGP_rel mannosyl-3- 96.6 0.0053 1.2E-07 61.9 7.0 66 854-938 1-66 (221)
45 TIGR01545 YfhB_g-proteo haloac 96.6 0.0051 1.1E-07 63.6 6.9 109 882-1009 96-208 (210)
46 PRK13478 phosphonoacetaldehyde 96.6 0.012 2.7E-07 61.6 9.7 97 882-995 103-199 (267)
47 PRK03669 mannosyl-3-phosphogly 96.5 0.0077 1.7E-07 63.4 7.9 69 851-938 6-74 (271)
48 TIGR01458 HAD-SF-IIA-hyp3 HAD- 96.5 0.0046 1E-07 65.4 6.2 56 853-917 2-58 (257)
49 PRK08238 hypothetical protein; 96.5 0.015 3.2E-07 67.7 10.6 129 851-1008 9-171 (479)
50 PF15017 AF1Q: Drug resistance 96.4 0.0015 3.2E-08 61.2 1.7 30 1026-1055 5-35 (87)
51 TIGR01482 SPP-subfamily Sucros 96.4 0.006 1.3E-07 61.1 5.8 49 855-914 1-49 (225)
52 PTZ00174 phosphomannomutase; P 96.4 0.0071 1.5E-07 63.2 6.5 53 851-917 4-56 (247)
53 PF12710 HAD: haloacid dehalog 96.3 0.0014 3E-08 63.4 1.1 93 883-989 88-192 (192)
54 PF13344 Hydrolase_6: Haloacid 96.3 0.0069 1.5E-07 56.3 5.6 52 855-918 1-52 (101)
55 PRK13226 phosphoglycolate phos 96.3 0.019 4.2E-07 59.1 9.1 92 882-995 97-191 (229)
56 PRK05446 imidazole glycerol-ph 96.3 0.028 6.1E-07 63.3 11.0 139 852-1005 2-151 (354)
57 TIGR01422 phosphonatase phosph 96.2 0.032 7E-07 57.8 10.4 97 882-995 101-197 (253)
58 PLN02645 phosphoglycolate phos 96.2 0.0094 2E-07 64.7 6.7 55 851-917 27-81 (311)
59 TIGR01428 HAD_type_II 2-haloal 96.2 0.025 5.5E-07 56.1 9.1 100 882-1006 94-196 (198)
60 PRK13222 phosphoglycolate phos 96.2 0.03 6.5E-07 56.0 9.6 95 881-995 94-189 (226)
61 TIGR01668 YqeG_hyp_ppase HAD s 96.1 0.036 7.9E-07 55.3 9.7 108 850-994 23-131 (170)
62 TIGR03333 salvage_mtnX 2-hydro 96.1 0.019 4.1E-07 58.6 7.9 96 881-993 71-177 (214)
63 PRK12702 mannosyl-3-phosphogly 96.1 0.039 8.5E-07 61.4 10.6 54 853-917 2-55 (302)
64 TIGR01486 HAD-SF-IIB-MPGP mann 96.0 0.013 2.9E-07 60.9 6.6 64 854-937 1-64 (256)
65 PRK00192 mannosyl-3-phosphogly 96.0 0.013 2.9E-07 61.7 6.6 50 852-912 4-53 (273)
66 PF08645 PNK3P: Polynucleotide 95.9 0.0094 2E-07 59.6 4.7 52 853-905 1-54 (159)
67 TIGR01681 HAD-SF-IIIC HAD-supe 95.9 0.016 3.5E-07 55.4 6.0 59 853-911 1-61 (128)
68 TIGR00099 Cof-subfamily Cof su 95.9 0.015 3.2E-07 60.2 6.1 51 854-918 1-51 (256)
69 PRK06769 hypothetical protein; 95.8 0.033 7.2E-07 55.7 8.2 124 852-995 4-133 (173)
70 TIGR01549 HAD-SF-IA-v1 haloaci 95.8 0.034 7.4E-07 52.8 7.9 87 882-992 66-154 (154)
71 PLN03243 haloacid dehalogenase 95.8 0.03 6.6E-07 59.8 8.2 94 882-994 111-204 (260)
72 TIGR01457 HAD-SF-IIA-hyp2 HAD- 95.8 0.019 4.1E-07 60.5 6.4 54 853-918 2-55 (249)
73 TIGR02461 osmo_MPG_phos mannos 95.7 0.021 4.6E-07 59.5 6.2 45 854-910 1-45 (225)
74 TIGR01452 PGP_euk phosphoglyco 95.6 0.022 4.7E-07 60.7 6.4 44 853-908 3-46 (279)
75 TIGR02252 DREG-2 REG-2-like, H 95.6 0.052 1.1E-06 54.0 8.6 89 882-994 107-200 (203)
76 TIGR01484 HAD-SF-IIB HAD-super 95.6 0.026 5.5E-07 56.3 6.1 48 854-911 1-48 (204)
77 smart00577 CPDc catalytic doma 95.5 0.026 5.6E-07 55.0 5.9 123 852-997 2-140 (148)
78 PLN02779 haloacid dehalogenase 95.5 0.059 1.3E-06 58.1 9.0 94 882-995 146-242 (286)
79 TIGR02726 phenyl_P_delta pheny 95.4 0.032 6.9E-07 56.7 6.3 109 852-994 7-120 (169)
80 PHA02597 30.2 hypothetical pro 95.4 0.037 8E-07 55.0 6.6 92 881-994 75-169 (197)
81 PRK14988 GMP/IMP nucleotidase; 95.3 0.095 2E-06 54.3 9.6 105 882-1008 95-201 (224)
82 PRK13288 pyrophosphatase PpaX; 95.2 0.043 9.3E-07 55.3 6.4 93 882-995 84-178 (214)
83 COG0546 Gph Predicted phosphat 95.1 0.16 3.4E-06 52.4 10.3 95 881-994 90-184 (220)
84 PLN02887 hydrolase family prot 95.0 0.039 8.4E-07 65.8 6.5 58 842-910 298-355 (580)
85 TIGR01459 HAD-SF-IIA-hyp4 HAD- 94.9 0.17 3.7E-06 52.8 9.9 55 851-918 7-61 (242)
86 TIGR01990 bPGM beta-phosphoglu 94.8 0.042 9E-07 53.3 5.0 90 882-994 89-180 (185)
87 PRK13223 phosphoglycolate phos 94.8 0.1 2.2E-06 55.8 8.3 91 882-995 103-197 (272)
88 TIGR02137 HSK-PSP phosphoserin 94.5 0.17 3.6E-06 52.5 8.9 123 881-1026 69-196 (203)
89 TIGR01685 MDP-1 magnesium-depe 94.5 0.13 2.8E-06 52.8 7.9 132 852-995 2-153 (174)
90 PRK13225 phosphoglycolate phos 94.4 0.095 2.1E-06 56.6 7.0 90 882-995 144-235 (273)
91 COG0241 HisB Histidinol phosph 94.4 0.4 8.6E-06 50.2 11.1 132 851-994 4-144 (181)
92 TIGR01485 SPP_plant-cyano sucr 94.3 0.055 1.2E-06 56.3 4.9 53 853-913 2-54 (249)
93 PRK10187 trehalose-6-phosphate 94.1 0.1 2.2E-06 55.8 6.5 54 852-911 14-68 (266)
94 PLN02940 riboflavin kinase 93.8 0.16 3.4E-06 57.3 7.5 93 882-994 95-189 (382)
95 TIGR01490 HAD-SF-IB-hyp1 HAD-s 93.7 0.4 8.7E-06 47.6 9.4 113 882-1007 89-202 (202)
96 PRK14502 bifunctional mannosyl 93.6 0.13 2.7E-06 62.8 6.7 56 851-917 415-470 (694)
97 TIGR02254 YjjG/YfnB HAD superf 93.5 0.36 7.8E-06 48.2 8.6 93 882-995 99-194 (224)
98 PF11019 DUF2608: Protein of u 93.4 0.45 9.7E-06 51.4 9.7 78 851-931 19-129 (252)
99 COG0647 NagD Predicted sugar p 93.3 0.15 3.3E-06 55.9 6.1 70 852-935 8-77 (269)
100 TIGR01460 HAD-SF-IIA Haloacid 93.2 0.11 2.3E-06 54.5 4.6 39 855-905 1-39 (236)
101 PRK09449 dUMP phosphatase; Pro 93.1 0.33 7.1E-06 49.1 7.8 91 882-995 97-192 (224)
102 TIGR01456 CECR5 HAD-superfamil 92.9 0.1 2.2E-06 57.2 4.1 41 854-906 2-46 (321)
103 PF05116 S6PP: Sucrose-6F-phos 92.3 0.15 3.3E-06 54.0 4.3 48 852-913 2-52 (247)
104 PLN02423 phosphomannomutase 92.1 0.3 6.6E-06 51.7 6.3 51 852-917 6-57 (245)
105 PLN02575 haloacid dehalogenase 92.1 0.48 1E-05 54.4 8.2 94 882-994 218-311 (381)
106 PHA03398 viral phosphatase sup 92.0 0.55 1.2E-05 52.7 8.4 120 852-1000 128-256 (303)
107 TIGR01684 viral_ppase viral ph 91.6 0.42 9.2E-06 53.5 6.8 62 845-918 120-181 (301)
108 PLN02919 haloacid dehalogenase 91.4 0.58 1.3E-05 59.5 8.7 92 882-994 163-257 (1057)
109 TIGR01686 FkbH FkbH-like domai 90.9 1.7 3.7E-05 47.7 10.6 122 851-993 2-124 (320)
110 PLN02382 probable sucrose-phos 90.0 0.46 1E-05 54.5 5.5 58 852-917 9-66 (413)
111 TIGR02471 sucr_syn_bact_C sucr 89.9 0.23 5E-06 51.2 2.8 45 854-911 1-45 (236)
112 TIGR02251 HIF-SF_euk Dullard-l 89.8 0.28 6.1E-06 49.1 3.2 63 853-917 2-78 (162)
113 PF03031 NIF: NLI interacting 89.7 0.64 1.4E-05 45.2 5.5 65 853-918 1-73 (159)
114 PF06941 NT5C: 5' nucleotidase 89.0 0.39 8.5E-06 48.5 3.7 38 881-918 74-115 (191)
115 TIGR01449 PGP_bact 2-phosphogl 87.0 3.1 6.8E-05 41.5 8.5 95 881-995 86-181 (213)
116 PRK11590 hypothetical protein; 86.8 2.3 5E-05 43.7 7.7 110 882-1008 97-208 (211)
117 COG2503 Predicted secreted aci 86.8 2.8 6E-05 46.5 8.6 75 849-928 76-166 (274)
118 PRK14501 putative bifunctional 86.4 1.2 2.7E-05 54.1 6.3 59 851-918 491-550 (726)
119 cd03016 PRX_1cys Peroxiredoxin 85.8 5 0.00011 41.6 9.5 79 855-937 9-97 (203)
120 TIGR00685 T6PP trehalose-phosp 85.7 1.5 3.2E-05 46.2 5.7 50 852-907 3-53 (244)
121 COG4359 Uncharacterized conser 84.7 1 2.2E-05 48.2 4.0 37 882-921 75-111 (220)
122 TIGR01509 HAD-SF-IA-v3 haloaci 83.5 1.9 4.2E-05 41.5 5.0 16 854-869 1-16 (183)
123 PLN03017 trehalose-phosphatase 83.3 2.1 4.5E-05 49.3 5.9 54 850-913 109-165 (366)
124 PF00578 AhpC-TSA: AhpC/TSA fa 82.1 6.5 0.00014 35.9 7.6 74 855-937 9-91 (124)
125 PRK10826 2-deoxyglucose-6-phos 81.7 5.3 0.00011 40.8 7.6 100 882-1002 94-193 (222)
126 COG3700 AphA Acid phosphatase 81.0 4.1 9E-05 43.7 6.7 125 851-999 62-211 (237)
127 PF13419 HAD_2: Haloacid dehal 80.4 4.5 9.8E-05 37.8 6.1 95 880-995 77-173 (176)
128 COG3769 Predicted hydrolase (H 80.1 4.4 9.6E-05 44.7 6.6 55 851-917 6-60 (274)
129 PRK13190 putative peroxiredoxi 79.2 11 0.00023 39.3 8.9 76 858-937 15-99 (202)
130 COG5663 Uncharacterized conser 79.0 2.5 5.4E-05 44.8 4.3 70 897-995 88-157 (194)
131 TIGR01544 HAD-SF-IE haloacid d 78.9 11 0.00025 41.9 9.6 130 881-1025 122-260 (277)
132 PF12689 Acid_PPase: Acid Phos 78.8 6.4 0.00014 40.8 7.2 130 851-995 2-147 (169)
133 TIGR02253 CTE7 HAD superfamily 76.8 3 6.4E-05 42.0 4.0 15 853-867 3-17 (221)
134 KOG1615 Phosphoserine phosphat 76.5 7.6 0.00017 42.2 7.0 121 881-1020 89-216 (227)
135 TIGR01511 ATPase-IB1_Cu copper 75.8 14 0.0003 44.1 9.8 101 854-994 387-488 (562)
136 PLN02151 trehalose-phosphatase 75.4 5.3 0.00011 45.9 5.9 55 849-910 95-149 (354)
137 PRK13599 putative peroxiredoxi 75.3 21 0.00046 37.9 10.0 104 882-1028 48-155 (215)
138 TIGR01454 AHBA_synth_RP 3-amin 75.1 11 0.00025 37.9 7.6 94 881-995 76-171 (205)
139 TIGR02540 gpx7 putative glutat 75.1 11 0.00024 36.8 7.4 62 857-918 8-82 (153)
140 PRK11590 hypothetical protein; 74.4 1.6 3.4E-05 44.9 1.5 19 851-869 5-23 (211)
141 cd03015 PRX_Typ2cys Peroxiredo 74.3 38 0.00081 33.9 11.0 131 854-1028 8-156 (173)
142 PLN02770 haloacid dehalogenase 72.9 14 0.0003 39.0 7.9 93 882-995 110-204 (248)
143 TIGR03351 PhnX-like phosphonat 72.2 25 0.00054 35.7 9.3 99 881-995 88-186 (220)
144 PTZ00056 glutathione peroxidas 71.6 19 0.00042 37.5 8.5 64 855-918 23-99 (199)
145 PRK11587 putative phosphatase; 71.1 16 0.00034 37.5 7.6 92 882-995 85-178 (218)
146 PLN02205 alpha,alpha-trehalose 71.1 7.5 0.00016 49.0 6.4 57 851-918 595-652 (854)
147 PRK10725 fructose-1-P/6-phosph 71.0 2.2 4.8E-05 41.9 1.5 16 852-867 5-20 (188)
148 TIGR03351 PhnX-like phosphonat 70.3 2.4 5.1E-05 42.9 1.6 15 853-867 2-16 (220)
149 TIGR02009 PGMB-YQAB-SF beta-ph 69.8 13 0.00028 36.3 6.4 94 880-994 88-181 (185)
150 TIGR01525 ATPase-IB_hvy heavy 69.5 28 0.0006 41.4 10.2 86 878-993 382-468 (556)
151 PF09419 PGP_phosphatase: Mito 68.7 15 0.00032 38.4 6.9 52 847-908 36-89 (168)
152 PRK09456 ?-D-glucose-1-phospha 67.0 17 0.00038 36.7 6.9 91 882-995 86-181 (199)
153 PF00702 Hydrolase: haloacid d 66.6 12 0.00026 36.8 5.6 91 877-992 124-215 (215)
154 TIGR01691 enolase-ppase 2,3-di 66.4 17 0.00037 38.7 7.0 95 881-995 96-192 (220)
155 TIGR02009 PGMB-YQAB-SF beta-ph 66.2 3.2 6.8E-05 40.5 1.4 16 853-868 2-17 (185)
156 TIGR01509 HAD-SF-IA-v3 haloaci 65.9 27 0.00059 33.7 7.7 90 880-994 85-179 (183)
157 PF02358 Trehalose_PPase: Treh 65.8 8.8 0.00019 40.1 4.7 48 856-909 1-49 (235)
158 PLN02580 trehalose-phosphatase 65.4 12 0.00026 43.5 6.1 53 851-910 118-170 (384)
159 PRK11587 putative phosphatase; 64.0 3.7 8.1E-05 42.0 1.6 15 853-867 4-18 (218)
160 PRK09437 bcp thioredoxin-depen 64.0 1.2E+02 0.0026 29.5 11.7 46 882-936 50-95 (154)
161 COG4996 Predicted phosphatase 63.7 8.5 0.00018 39.8 3.9 20 853-872 1-20 (164)
162 PTZ00256 glutathione peroxidas 63.3 39 0.00084 34.5 8.6 61 858-918 27-101 (183)
163 cd03018 PRX_AhpE_like Peroxire 63.0 75 0.0016 30.2 10.0 34 882-918 48-81 (149)
164 TIGR02250 FCP1_euk FCP1-like p 62.1 19 0.00042 36.4 6.2 67 850-917 4-94 (156)
165 cd03017 PRX_BCP Peroxiredoxin 61.8 66 0.0014 30.2 9.2 34 882-918 43-76 (140)
166 cd00340 GSH_Peroxidase Glutath 61.5 51 0.0011 32.3 8.8 62 857-918 8-81 (152)
167 cd02971 PRX_family Peroxiredox 60.9 75 0.0016 29.7 9.4 34 882-918 42-75 (140)
168 TIGR01106 ATPase-IIC_X-K sodiu 60.7 28 0.0006 44.6 8.5 113 875-994 562-707 (997)
169 TIGR01548 HAD-SF-IA-hyp1 haloa 60.7 4.1 8.8E-05 41.0 1.1 15 853-867 1-15 (197)
170 PRK10671 copA copper exporting 60.7 31 0.00066 43.2 8.7 86 878-993 648-733 (834)
171 COG4087 Soluble P-type ATPase 60.5 30 0.00066 35.9 7.1 105 857-1005 19-123 (152)
172 cd03012 TlpA_like_DipZ_like Tl 60.0 20 0.00043 33.7 5.5 37 882-918 42-81 (126)
173 TIGR01490 HAD-SF-IB-hyp1 HAD-s 59.6 4 8.7E-05 40.6 0.9 17 854-870 1-17 (202)
174 PLN02770 haloacid dehalogenase 58.4 5.3 0.00011 42.1 1.6 16 852-867 22-37 (248)
175 TIGR02247 HAD-1A3-hyp Epoxide 58.2 16 0.00035 36.8 4.9 95 881-995 95-192 (211)
176 PLN02412 probable glutathione 57.4 64 0.0014 32.6 8.8 51 856-906 14-72 (167)
177 TIGR02253 CTE7 HAD superfamily 56.6 47 0.001 33.6 7.9 94 881-995 95-191 (221)
178 PRK13191 putative peroxiredoxi 56.1 75 0.0016 33.9 9.5 104 882-1028 53-160 (215)
179 TIGR01116 ATPase-IIA1_Ca sarco 55.9 43 0.00093 42.6 9.0 106 875-993 531-651 (917)
180 PF06888 Put_Phosphatase: Puta 55.5 23 0.0005 38.6 5.8 48 882-937 73-124 (234)
181 COG1877 OtsB Trehalose-6-phosp 55.0 21 0.00046 39.6 5.5 54 849-908 15-69 (266)
182 PF00702 Hydrolase: haloacid d 54.6 7.4 0.00016 38.3 1.8 41 957-1000 133-173 (215)
183 TIGR01497 kdpB K+-transporting 54.3 54 0.0012 40.8 9.2 87 878-994 444-530 (675)
184 cd02969 PRX_like1 Peroxiredoxi 54.2 65 0.0014 31.9 8.2 48 883-936 45-97 (171)
185 PRK06698 bifunctional 5'-methy 53.8 50 0.0011 38.3 8.4 91 882-994 332-422 (459)
186 COG1778 Low specificity phosph 53.5 55 0.0012 34.8 7.8 112 851-995 7-122 (170)
187 COG0637 Predicted phosphatase/ 53.5 7.1 0.00015 40.9 1.5 92 881-994 87-181 (221)
188 TIGR01993 Pyr-5-nucltdase pyri 52.8 7.9 0.00017 38.3 1.7 14 854-867 2-15 (184)
189 PRK13189 peroxiredoxin; Provis 51.5 1.3E+02 0.0029 32.1 10.5 104 882-1028 55-162 (222)
190 PRK10563 6-phosphogluconate ph 50.7 8.6 0.00019 39.1 1.6 18 978-995 165-182 (221)
191 PRK10826 2-deoxyglucose-6-phos 50.7 8.3 0.00018 39.4 1.4 17 851-867 6-22 (222)
192 TIGR03137 AhpC peroxiredoxin. 50.2 1.1E+02 0.0024 31.5 9.4 26 882-907 51-76 (187)
193 PRK10748 flavin mononucleotide 50.2 8.2 0.00018 40.4 1.4 25 977-1004 185-210 (238)
194 TIGR01493 HAD-SF-IA-v2 Haloaci 50.0 7 0.00015 38.1 0.8 14 854-867 1-14 (175)
195 TIGR01459 HAD-SF-IIA-hyp4 HAD- 48.2 45 0.00097 35.1 6.4 92 880-994 138-236 (242)
196 TIGR01449 PGP_bact 2-phosphogl 47.9 7.5 0.00016 38.9 0.6 13 855-867 1-13 (213)
197 TIGR02247 HAD-1A3-hyp Epoxide 47.1 10 0.00022 38.2 1.5 15 853-867 3-17 (211)
198 TIGR01512 ATPase-IB2_Cd heavy 46.1 75 0.0016 37.9 8.5 86 878-993 360-446 (536)
199 PF13464 DUF4115: Domain of un 45.6 25 0.00054 31.5 3.5 25 43-75 37-61 (77)
200 TIGR01522 ATPase-IIA2_Ca golgi 44.1 90 0.002 39.6 9.1 103 878-993 526-638 (884)
201 PTZ00445 p36-lilke protein; Pr 43.6 1.2E+02 0.0026 33.5 8.7 140 847-995 38-201 (219)
202 KOG2134 Polynucleotide kinase 43.4 22 0.00048 41.9 3.5 78 849-928 72-156 (422)
203 TIGR01454 AHBA_synth_RP 3-amin 42.8 10 0.00022 38.3 0.6 26 979-1004 128-157 (205)
204 PLN02177 glycerol-3-phosphate 42.6 14 0.00029 44.2 1.8 41 954-1003 175-215 (497)
205 TIGR01524 ATPase-IIIB_Mg magne 41.9 69 0.0015 40.6 7.7 100 878-992 513-622 (867)
206 PLN02811 hydrolase 40.8 73 0.0016 32.9 6.5 98 881-995 79-180 (220)
207 PF10307 DUF2410: Hypothetical 40.2 1.8E+02 0.0039 31.6 9.3 100 877-992 51-153 (197)
208 PLN03063 alpha,alpha-trehalose 40.2 53 0.0011 41.4 6.3 61 851-917 506-567 (797)
209 PLN03064 alpha,alpha-trehalose 40.1 54 0.0012 42.3 6.4 62 851-917 590-657 (934)
210 TIGR01647 ATPase-IIIA_H plasma 39.9 1.1E+02 0.0024 38.3 8.9 104 878-995 440-559 (755)
211 PTZ00253 tryparedoxin peroxida 39.0 1.6E+02 0.0035 30.5 8.6 25 883-907 57-81 (199)
212 PRK14010 potassium-transportin 38.5 1.3E+02 0.0029 37.6 9.2 88 878-995 439-528 (673)
213 TIGR02245 HAD_IIID1 HAD-superf 38.1 77 0.0017 33.8 6.3 63 850-917 19-81 (195)
214 cd02970 PRX_like2 Peroxiredoxi 36.8 1.4E+02 0.0031 28.0 7.2 49 882-939 43-91 (149)
215 PRK06698 bifunctional 5'-methy 35.8 16 0.00034 42.3 0.9 16 853-868 242-257 (459)
216 PRK15122 magnesium-transportin 35.4 1E+02 0.0022 39.5 7.7 106 875-995 544-662 (903)
217 PF08534 Redoxin: Redoxin; In 35.3 2.2E+02 0.0047 27.2 8.3 58 858-918 15-81 (146)
218 PRK09456 ?-D-glucose-1-phospha 34.8 22 0.00049 35.9 1.7 27 978-1004 137-167 (199)
219 PRK01122 potassium-transportin 34.2 1.6E+02 0.0035 36.9 9.0 88 878-995 443-532 (679)
220 TIGR01517 ATPase-IIB_Ca plasma 33.9 1.8E+02 0.0039 37.4 9.5 103 878-995 577-693 (941)
221 PRK11033 zntA zinc/cadmium/mer 33.7 1.4E+02 0.003 37.5 8.3 83 878-992 566-648 (741)
222 PF13419 HAD_2: Haloacid dehal 33.5 19 0.00041 33.7 0.9 14 855-868 1-14 (176)
223 TIGR01452 PGP_euk phosphoglyco 33.5 1.2E+02 0.0025 32.9 6.9 26 880-906 143-168 (279)
224 PRK00522 tpx lipid hydroperoxi 32.9 5.3E+02 0.011 26.1 10.9 70 855-934 28-106 (167)
225 TIGR01548 HAD-SF-IA-hyp1 haloa 32.7 1.5E+02 0.0032 30.0 7.0 90 881-990 107-196 (197)
226 PTZ00137 2-Cys peroxiredoxin; 31.0 2.5E+02 0.0054 31.4 9.0 101 882-1027 118-223 (261)
227 COG1011 Predicted hydrolase (H 30.9 28 0.0006 35.1 1.6 18 851-868 3-20 (229)
228 PF05152 DUF705: Protein of un 29.2 89 0.0019 35.8 5.2 63 846-920 117-179 (297)
229 cd03014 PRX_Atyp2cys Peroxired 28.0 5.4E+02 0.012 24.6 10.6 59 855-918 10-77 (143)
230 TIGR01523 ATPase-IID_K-Na pota 27.4 2.4E+02 0.0051 37.0 9.1 103 878-994 644-769 (1053)
231 cd02071 MM_CoA_mut_B12_BD meth 26.6 5.9E+02 0.013 24.6 10.1 96 877-994 8-104 (122)
232 PRK03147 thiol-disulfide oxido 26.6 5.8E+02 0.013 24.9 9.8 35 882-918 80-114 (173)
233 cd02966 TlpA_like_family TlpA- 26.5 64 0.0014 27.8 2.9 36 973-1010 78-113 (116)
234 KOG0207 Cation transport ATPas 26.2 2.7E+02 0.0058 36.5 9.0 104 852-994 703-809 (951)
235 COG1225 Bcp Peroxiredoxin [Pos 25.0 4.2E+02 0.0091 27.9 8.8 69 858-936 17-95 (157)
236 PF10340 DUF2424: Protein of u 24.6 4.1E+02 0.0088 31.5 9.5 146 855-1007 156-314 (374)
237 PRK10856 cytoskeletal protein 24.6 55 0.0012 37.4 2.7 28 43-78 290-317 (331)
238 TIGR01494 ATPase_P-type ATPase 24.1 4.1E+02 0.0089 31.3 9.6 82 878-992 345-426 (499)
239 TIGR01458 HAD-SF-IIA-hyp3 HAD- 24.0 1.3E+02 0.0027 32.6 5.1 30 879-908 119-148 (257)
240 PRK15000 peroxidase; Provision 24.0 4.9E+02 0.011 27.5 9.2 102 882-1027 54-160 (200)
241 COG1654 BirA Biotin operon rep 23.3 72 0.0016 30.0 2.7 39 881-937 32-70 (79)
242 PRK10382 alkyl hydroperoxide r 23.0 4.2E+02 0.009 27.9 8.5 33 883-918 52-84 (187)
243 KOG2882 p-Nitrophenyl phosphat 22.7 1E+02 0.0022 35.5 4.2 58 853-925 23-80 (306)
244 KOG1618 Predicted phosphatase 22.3 1.1E+02 0.0023 35.9 4.3 73 849-935 32-108 (389)
245 PLN02499 glycerol-3-phosphate 21.9 49 0.0011 40.1 1.7 79 892-985 105-185 (498)
246 PRK10517 magnesium-transportin 21.7 3.3E+02 0.0071 35.2 8.7 103 878-995 548-662 (902)
247 COG4229 Predicted enolase-phos 21.5 1.2E+02 0.0026 33.3 4.2 66 853-925 5-79 (229)
248 PRK10513 sugar phosphate phosp 20.2 83 0.0018 33.1 2.8 40 954-994 195-234 (270)
No 1
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=100.00 E-value=2.7e-134 Score=1133.97 Aligned_cols=258 Identities=56% Similarity=0.977 Sum_probs=251.3
Q ss_pred ccccccccccccCCCHHHHHhcCCCCCccEEEEEEeeecCcceeeeEEEEEecCCCcEEEEecCCccccccccccccccc
Q 001552 797 KTNMAKKKIKVLTPTSEQLASLNLKEGKNSVTFTFSTAMLGKQQVDARIYLWKWNTRIVISDVDGTITKSDVLGQFMPLV 876 (1055)
Q Consensus 797 ~p~~~kk~~rsLrpTSeQL~kLNLk~G~N~V~FsVtT~yqG~~~Vea~IYLW~~~dKIVISDIDGTITKSDvlGhIlP~L 876 (1055)
++..+++++|+||||+|||++||||+|.|.|+|+|+|+|||+|+|+|+||||+|++||||||||||||||||+|||+|+|
T Consensus 475 se~~~~qy~rtLrltSEQL~sLnLk~G~N~v~FsisT~~~Gt~~c~~~IYlWkWn~kIVISDIDGTITKSDvLGh~lp~i 554 (738)
T KOG2116|consen 475 SENPRPQYVRTLRLTSEQLKSLNLKDGKNDVVFSISTQYQGTAQCEGNIYLWKWNDKIVISDIDGTITKSDVLGHVLPMI 554 (738)
T ss_pred CCCcchhhhhhcccCHHHHhhcCCccCCceeEEEEEecccceEEEeeEEEEEecCCcEEEecCCCceEhhhhhhhhhhhh
Confidence 33667888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCchHHH
Q 001552 877 GVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFK 956 (1055)
Q Consensus 877 GkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFK 956 (1055)
||||||.|||+||++|++|||||||||||+|+||++||.||+||+|+|+.||+|||+|||++||+||+||||.|+||+||
T Consensus 555 GkDWTh~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPViLSPd~lf~Al~REVI~RkPe~FK 634 (738)
T KOG2116|consen 555 GKDWTHTGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPVILSPDSLFAALHREVIERKPEVFK 634 (738)
T ss_pred cCcchhhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCEEeCCCcchHHHHHHHHHcCchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCCCcEEEECCCCceeeeccc-CCcchhhHHhhhcccCCCCCCC
Q 001552 957 IACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPRGKIFIINPKGEVVVNHRV-DSKTYSSIHALVHGMFPHTTST 1035 (1055)
Q Consensus 957 IacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~sRIFiINpkGel~~e~~~-~~sSY~~L~dlVD~~FPpl~~~ 1035 (1055)
||||++|++|||+.+||||||||||+||+++|++||||.+|||||||+|||++++.. .++||.+|+++|||||||++..
T Consensus 635 IAcL~DIk~LF~p~~nPFYAgFGNR~TDviSY~~VgVP~~RIFtINpkGEv~~e~~~~~~~SY~~l~elVd~mFPplS~~ 714 (738)
T KOG2116|consen 635 IACLTDIKNLFPPSGNPFYAGFGNRITDVISYRQVGVPLSRIFTINPKGEVIQELLKTLKSSYVRLNELVDHMFPPLSRS 714 (738)
T ss_pred HHHHHHHHHhcCCCCCceeeecCCCcccceeeeeecCCccceEEECCCceehHHHHhhhhhhhhhHHHHHHHhCCCcccc
Confidence 999999999999999999999999999999999999999999999999999999876 6799999999999999999998
Q ss_pred CCc-----ccccccccCCCCCCCC
Q 001552 1036 EQE-----DFNQWNYWKLPPPNID 1054 (1055)
Q Consensus 1036 ~~~-----efs~f~yWr~plp~id 1054 (1055)
+++ +|++|||||+|+|+++
T Consensus 715 ~~~~~~~~~fs~fnfWr~p~~~v~ 738 (738)
T KOG2116|consen 715 TSDDFPNPEFSNFNFWREPLPEVD 738 (738)
T ss_pred ccccCCccccCCceeecCCCccCC
Confidence 766 8999999999999986
No 2
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=100.00 E-value=4e-94 Score=783.71 Aligned_cols=244 Identities=43% Similarity=0.768 Sum_probs=227.4
Q ss_pred ccccccccCCCHHHHHhcCCCCCccEEEEEEeeecCcceeeeEEEEEecCCCcEEEEecCCcccccccccccccccCCCC
Q 001552 801 AKKKIKVLTPTSEQLASLNLKEGKNSVTFTFSTAMLGKQQVDARIYLWKWNTRIVISDVDGTITKSDVLGQFMPLVGVDW 880 (1055)
Q Consensus 801 ~kk~~rsLrpTSeQL~kLNLk~G~N~V~FsVtT~yqG~~~Vea~IYLW~~~dKIVISDIDGTITKSDvlGhIlP~LGkDW 880 (1055)
.+.+.++|+++++||..|||++|.|.+.|.|.. |.+.|.++||+|.|+.|+|||||||||||||++||+..++||||
T Consensus 327 ~~d~~~tiklnsdqLr~LnLkyGkn~lkf~V~g---~~a~~t~~ifvwr~n~kiVVsDiDGTITkSD~~Ghv~~miGkdw 403 (580)
T COG5083 327 VTDYNGTIKLNSDQLRNLNLKYGKNLLKFYVEG---GKAIATMYIFVWRNNKKIVVSDIDGTITKSDALGHVKQMIGKDW 403 (580)
T ss_pred eecccceEEcCChHHhcccCccCcceEEEEEcC---CccEEEEEEEEEeCCCcEEEEecCCcEEehhhHHHHHHHhccch
Confidence 445567899999999999999999999999984 66899999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCchHHHHHHH
Q 001552 881 SQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFKIACL 960 (1055)
Q Consensus 881 TH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL 960 (1055)
||.|||+||.+|.+|||+|+|||||+.||++.||.||+++.|+|+.||+||++|+|++.++||+||+|.++||.|||+||
T Consensus 404 th~gVAkLYtdI~rNGYkI~YltsR~~Gqa~sTrsylrnieQngykLpdgpviLspd~t~aal~relIlrkpE~FKiayL 483 (580)
T COG5083 404 THNGVAKLYTDIDRNGYKIKYLTSRSYGQADSTRSYLRNIEQNGYKLPDGPVILSPDRTMAALYRELILRKPEVFKIAYL 483 (580)
T ss_pred hhcchhhhhhhhccCceEEEEEecccccchhhhhhHHHhhhhcCccCCCCCEeeccchhhhhhhhhhhhcChHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCCCcEEEECCCCceeeeccc--CCcchhhHHhhhcccCCCCCCCCC-
Q 001552 961 EDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPRGKIFIINPKGEVVVNHRV--DSKTYSSIHALVHGMFPHTTSTEQ- 1037 (1055)
Q Consensus 961 ~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~sRIFiINpkGel~~e~~~--~~sSY~~L~dlVD~~FPpl~~~~~- 1037 (1055)
++|+.+|.. .+|||||||||.||+++|+.||||++||||||.+|||+.+... ++++|..|+++|||||||+..+.-
T Consensus 484 ndl~slf~e-~~PFyAGFGNriTDvisY~~vgIp~SrIFTIn~~gev~~ell~~sy~~sy~~mne~VDhfFPp~s~~t~d 562 (580)
T COG5083 484 NDLKSLFIE-FDPFYAGFGNRITDVISYSNVGIPKSRIFTINKNGEVHGELLIVSYRSSYKQMNELVDHFFPPLSPKTID 562 (580)
T ss_pred HHHHHhhCc-CChhhccccccchhheeeccccCChhheEEeccCCcEEEEEEEeehhhHHHHHhhhhhhcCCCCCCcccc
Confidence 999999976 5799999999999999999999999999999999999998643 689999999999999999986542
Q ss_pred ---cccccccccCCCC
Q 001552 1038 ---EDFNQWNYWKLPP 1050 (1055)
Q Consensus 1038 ---~efs~f~yWr~pl 1050 (1055)
.-|+.| |..+-
T Consensus 563 ~~~~~~~v~--~Sp~n 576 (580)
T COG5083 563 FIDHSFSVF--WSPQN 576 (580)
T ss_pred ccccccccc--CCCcc
Confidence 234444 87643
No 3
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=100.00 E-value=1.3e-58 Score=455.80 Aligned_cols=157 Identities=61% Similarity=1.094 Sum_probs=154.9
Q ss_pred EEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCcee
Q 001552 854 IVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVV 933 (1055)
Q Consensus 854 IVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVL 933 (1055)
|||||||||||+||++||+++++|+||+|+|||+||++|++|||+||||||||++|+++||+||++++|++++||+|||+
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~ 80 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVL 80 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEE
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCccchhhhhccCchHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCCCcEEEECCCCceeee
Q 001552 934 ISPDGLFPSLFREVIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPRGKIFIINPKGEVVVN 1010 (1055)
Q Consensus 934 LSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~sRIFiINpkGel~~e 1010 (1055)
++|++|++||+||++.++|++||++||++|+++||...+|||||||||.||+.||++||||++|||||||+|++++|
T Consensus 81 ~sP~~l~~al~rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip~~rIF~I~~~g~~~~~ 157 (157)
T PF08235_consen 81 LSPDSLFSALHREVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIPKSRIFIINPKGEVKQE 157 (157)
T ss_pred ECCcchhhhhhccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCChhhEEEECCCCeEecC
Confidence 99999999999999999999999999999999999989999999999999999999999999999999999999865
No 4
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=100.00 E-value=6.5e-43 Score=339.97 Aligned_cols=156 Identities=63% Similarity=1.074 Sum_probs=152.3
Q ss_pred EEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCcee
Q 001552 854 IVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVV 933 (1055)
Q Consensus 854 IVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVL 933 (1055)
+||||||||||+||++||+++++|++|.|+|++++|++++++||+|+|+||||++++..||.||+.+.|.+++||.||++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li 80 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVL 80 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEE
Confidence 59999999999999999999999999999999999999999999999999999999999999999999888999999999
Q ss_pred cCCCCCCccchhhhhccCchHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCCCcEEEECCCCceee
Q 001552 934 ISPDGLFPSLFREVIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPRGKIFIINPKGEVVV 1009 (1055)
Q Consensus 934 LSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~sRIFiINpkGel~~ 1009 (1055)
+++++++.++.+|++.++|++||+++|+.|+++||...+|||+|||||++|+.||+++|||++|||+|||+|+|++
T Consensus 81 ~~~g~~~~~~~~e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~~~i~~i~~~~~~~~ 156 (157)
T smart00775 81 LSPDRLFAALHREVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPPSRIFTINPKGEVHQ 156 (157)
T ss_pred EcCCcchhhhhcccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCChhhEEEECCCCcccc
Confidence 9999999999999999999999999999999999988899999999999999999999999999999999999975
No 5
>PF04571 Lipin_N: lipin, N-terminal conserved region; InterPro: IPR007651 Mutations in the lipin gene lead to fatty liver dystrophy in mice. The protein has been shown to be phosphorylated by the TOR Ser/Thr protein kinases in response to insulin stimulation. This entry represents a conserved domain found at the N terminus of the member proteins [, ].
Probab=100.00 E-value=3.7e-38 Score=295.57 Aligned_cols=93 Identities=55% Similarity=0.876 Sum_probs=87.5
Q ss_pred Cccc-cccccccccceeeccCCCcCCCCceeEEEEecCCCccccCCceEeccccccccccCCcEEEEEECCeecceeeee
Q 001552 1 MYTV-GRIGSYISRGVYTVSAPFHPFGGAVDIIVVEQPDGSFKSSPWYVRFGKFQGVLKTKEKVVTINVNGVDANFNMYL 79 (1055)
Q Consensus 1 M~yV-gr~~s~is~~~y~~s~p~~tLSGAIDVIVVeqpDGsl~sSPFHVRFGK~qgvLr~~eK~V~i~VNG~~~~~~MkL 79 (1055)
|||| ||+.++|+ .+|+..|| +||||||||||||||||+|+||||||||||+ |+||+++|+|+|.|||++++++|||
T Consensus 1 M~yv~~~i~~~v~-~~~~~~np-atlSGAiDVIVV~q~DGs~~sSPFhVRFGk~-~vl~~~ek~V~I~VNG~~~~~~MkL 77 (110)
T PF04571_consen 1 MNYVAGRIFSSVS-EVYNPINP-ATLSGAIDVIVVEQPDGSLKSSPFHVRFGKL-GVLRPREKVVDIEVNGKPVDFHMKL 77 (110)
T ss_pred CceehHhHhhhHH-HHhccCCc-ccccCceeEEEEecCCCCEecCccEEEEcce-eeecccCcEEEEEECCEEcceEEEE
Confidence 9999 99999997 57777788 8999999999999999999999999999999 5999999999999999999999999
Q ss_pred CCCccEEEEeecccccc
Q 001552 80 DHKGEAYFLKEADVEEG 96 (1055)
Q Consensus 80 g~~GEAfFv~e~~~~~~ 96 (1055)
|++|||||+++++++..
T Consensus 78 g~~GeAfFv~e~~~~~~ 94 (110)
T PF04571_consen 78 GENGEAFFVEETEDDEE 94 (110)
T ss_pred CCCcEEEEEEecCCCcc
Confidence 99999999999987643
No 6
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=99.31 E-value=1.1e-11 Score=135.19 Aligned_cols=172 Identities=16% Similarity=0.184 Sum_probs=130.9
Q ss_pred HhcCCCCCccEEEEEEeeecCcceeeeEEEEEecCCCcEEEEecCCcccccccccccc-------cccCCCCChhhHHHH
Q 001552 816 ASLNLKEGKNSVTFTFSTAMLGKQQVDARIYLWKWNTRIVISDVDGTITKSDVLGQFM-------PLVGVDWSQTGVAHL 888 (1055)
Q Consensus 816 ~kLNLk~G~N~V~FsVtT~yqG~~~Vea~IYLW~~~dKIVISDIDGTITKSDvlGhIl-------P~LGkDWTH~GVAkL 888 (1055)
.-+++.+|+++|...+.+. + ...-.+.+-+.+...-.+|||||+||..+++.+... -+--..|+.|||..+
T Consensus 127 ~~~~~~~g~~av~lq~eg~-~-~~Ae~~~~~v~~~a~igiISDiDDTV~~T~V~~~~r~~~~s~~l~~~tr~~ipGV~~~ 204 (373)
T COG4850 127 IPFPPTKGNHAVRLQSEGE-K-IKAEAAPVPVLNRAGIGIISDIDDTVKVTGVTEGPRKAGRSLLLHALTRQVIPGVSAW 204 (373)
T ss_pred cccCCCCCceeEEeecCCC-C-cchhcccceeecccceeeeeccccceEecccccchHHHHHHhhhcccccCCCCCHHHH
Confidence 3467888998988877653 1 211223333445666679999999999999976321 123468999999999
Q ss_pred HHHHHHcC-CeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCC-CCccchhhhhccCchHHHHHHHHHHHhh
Q 001552 889 FSAIKENG-YQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDG-LFPSLFREVIRRAPHEFKIACLEDIKAL 966 (1055)
Q Consensus 889 YskI~~NG-YkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~-Lf~AL~REVI~KkPeeFKIacL~dIk~L 966 (1055)
|+.+++-| .+|+|||..||.....+.+||. .++||.||+||..-+ .+.-+ ...-...|...|+.|..-
T Consensus 205 yr~l~~~~~apvfYvSnSPw~~f~~L~efi~-----~~~~P~GPl~L~~~g~~~~~i-----~~sga~rK~~~l~nil~~ 274 (373)
T COG4850 205 YRALTNLGDAPVFYVSNSPWQLFPTLQEFIT-----NRNFPYGPLLLRRWGGVLDNI-----IESGAARKGQSLRNILRR 274 (373)
T ss_pred HHHHHhcCCCCeEEecCChhHhHHHHHHHHh-----cCCCCCCchhHhhcCCccccc-----ccchhhhcccHHHHHHHh
Confidence 99999999 9999999999999999999994 778999999997432 22222 223446688888878888
Q ss_pred CCCCCCCEEEccCCCchhHHHHHhcC-CCCCcEEEE
Q 001552 967 FPSDCNPFYAGFGNRDTDEISYLKVG-IPRGKIFII 1001 (1055)
Q Consensus 967 FP~~~nPFyAGFGNR~TDv~AYraVG-IP~sRIFiI 1001 (1055)
||.. .|+.-.++..+|.++|..+- -.++||.-|
T Consensus 275 ~p~~--kfvLVGDsGE~DpeIYae~v~~fP~RIl~I 308 (373)
T COG4850 275 YPDR--KFVLVGDSGEHDPEIYAEMVRCFPNRILGI 308 (373)
T ss_pred CCCc--eEEEecCCCCcCHHHHHHHHHhCccceeeE
Confidence 8875 78889999999999999965 788887544
No 7
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=98.90 E-value=6.6e-09 Score=97.31 Aligned_cols=94 Identities=21% Similarity=0.307 Sum_probs=76.7
Q ss_pred eEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCchHHHHHHHHHHHhhCCCCCCCEEEc
Q 001552 898 QLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKALFPSDCNPFYAG 977 (1055)
Q Consensus 898 kILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~LFP~~~nPFyAG 977 (1055)
+|+|||+.||.++...++||. .+++|.||++|..-+.. .+..+....++.|...|+.|...||.. +|+..
T Consensus 1 pf~YvS~SPwnly~~l~~Fl~-----~~~~P~G~~~Lr~~~~~---~~~~~~~~~~~~K~~~i~~i~~~fP~~--kfiLI 70 (100)
T PF09949_consen 1 PFFYVSNSPWNLYPFLRDFLR-----RNGFPAGPLLLRDYGPS---LSGLFKSGAEEHKRDNIERILRDFPER--KFILI 70 (100)
T ss_pred CEEEEcCCHHHHHHHHHHHHH-----hcCCCCCceEcccCCcc---ccccccCCchhHHHHHHHHHHHHCCCC--cEEEE
Confidence 589999999999999999995 57899999999876311 222222233369999999999999975 89999
Q ss_pred cCCCchhHHHHHhcC-CCCCcEEEE
Q 001552 978 FGNRDTDEISYLKVG-IPRGKIFII 1001 (1055)
Q Consensus 978 FGNR~TDv~AYraVG-IP~sRIFiI 1001 (1055)
.+|.+.|+++|.++- -.++||-.|
T Consensus 71 GDsgq~DpeiY~~ia~~~P~~i~ai 95 (100)
T PF09949_consen 71 GDSGQHDPEIYAEIARRFPGRILAI 95 (100)
T ss_pred eeCCCcCHHHHHHHHHHCCCCEEEE
Confidence 999999999999976 778887654
No 8
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=98.89 E-value=2.3e-09 Score=111.97 Aligned_cols=178 Identities=20% Similarity=0.167 Sum_probs=117.3
Q ss_pred ccCCCHHHHHhcCCCCCccEEEEE-EeeecCcc-eeeeE--EEEE-ecCCCcEEEEecCCccccccccccccc-ccCCCC
Q 001552 807 VLTPTSEQLASLNLKEGKNSVTFT-FSTAMLGK-QQVDA--RIYL-WKWNTRIVISDVDGTITKSDVLGQFMP-LVGVDW 880 (1055)
Q Consensus 807 sLrpTSeQL~kLNLk~G~N~V~Fs-VtT~yqG~-~~Vea--~IYL-W~~~dKIVISDIDGTITKSDvlGhIlP-~LGkDW 880 (1055)
-|..+.+++..++.++|.+.+.-. +..++.-. .+.+. -+|. .....+++++|+||||....-..+.-+ ....+-
T Consensus 108 ~l~~~~e~~~~R~~~R~~~~~~~~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~ 187 (300)
T PHA02530 108 VFDVPVEELVKRNRKRGERAVPEDVLRSMFKQMKEYRGLVWPVYTADPGLPKAVIFDIDGTLAKMGGRSPYDWTKVKEDK 187 (300)
T ss_pred EeCCCHHHHHHHHHccCcCCCCHHHHHHHHHHHHHhcCCCCceeccCCCCCCEEEEECCCcCcCCCCCCccchhhcccCC
Confidence 355678888888888877766543 34333222 22222 2222 233457899999999997432211111 122334
Q ss_pred ChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCch-HHHHHH
Q 001552 881 SQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPH-EFKIAC 959 (1055)
Q Consensus 881 TH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPe-eFKIac 959 (1055)
..+|+.++.+.++++||+++++|+|+..++..|.+||.. .+.+--.++..+. ...++|+...++|+ +.+..+
T Consensus 188 ~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~-----~~~~f~~i~~~~~--~~~~~~~~~~~kp~p~~~~~~ 260 (300)
T PHA02530 188 PNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQ-----TDIWFDDLIGRPP--DMHFQREQGDKRPDDVVKEEI 260 (300)
T ss_pred CChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHH-----cCCchhhhhCCcc--hhhhcccCCCCCCcHHHHHHH
Confidence 589999999999999999999999999999999999952 2211122333331 23357887777888 788888
Q ss_pred HHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCC
Q 001552 960 LEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPR 995 (1055)
Q Consensus 960 L~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~ 995 (1055)
|+.+....| . -...||++.+|+.+++++||++
T Consensus 261 l~~~~~~~~---~-~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 261 FWEKIAPKY---D-VLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred HHHHhccCc---e-EEEEEcCcHHHHHHHHHhCCeE
Confidence 887532111 1 2336999999999999999975
No 9
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.67 E-value=1.2e-07 Score=83.33 Aligned_cols=128 Identities=18% Similarity=0.061 Sum_probs=78.7
Q ss_pred EEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCcee
Q 001552 854 IVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVV 933 (1055)
Q Consensus 854 IVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVL 933 (1055)
++|||+||||+..+...+. .......+|+.+++..++++||+|+.+|+|+ ...++.|+..+ +...+...++
T Consensus 1 ~~vfD~D~tl~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~---~~~~~~~~~~~---~~~~~~~~i~ 71 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAE---IEELELYPGVKEALKELKEKGIKLALATNKS---RREVLELLEEL---GLDDYFDPVI 71 (139)
T ss_pred CeEEccCCceEccCccccc---cccCCcCcCHHHHHHHHHHCCCeEEEEeCch---HHHHHHHHHHc---CCchhhhhee
Confidence 4899999999997654332 3345668999999999999999999999998 44556666421 1111323333
Q ss_pred cCCCCCC-------ccchhhhhccCchHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCC
Q 001552 934 ISPDGLF-------PSLFREVIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIP 994 (1055)
Q Consensus 934 LSPd~Lf-------~AL~REVI~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP 994 (1055)
.+.+... ......++..+|...+...+.+....- ....+ .+|++.+|+.+.+.+|++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~igD~~~d~~~~~~~g~~ 135 (139)
T cd01427 72 TSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVD---PEEVL-MVGDSLNDIEMAKAAGGL 135 (139)
T ss_pred ccchhhhhcccccccccccccccCCCCHHHHHHHHHHcCCC---hhhEE-EeCCCHHHHHHHHHcCCc
Confidence 2221111 001112233356554444433333321 22333 699999999999999875
No 10
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=98.57 E-value=3.8e-07 Score=96.28 Aligned_cols=128 Identities=18% Similarity=0.192 Sum_probs=92.4
Q ss_pred CCCcEEEEecCCccccccc------cc-cccc--------ccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHH
Q 001552 850 WNTRIVISDVDGTITKSDV------LG-QFMP--------LVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTR 914 (1055)
Q Consensus 850 ~~dKIVISDIDGTITKSDv------lG-hIlP--------~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR 914 (1055)
....+||+|||.|+..+-- .| .-.. ..|+..+-||+.+||+.++++|++|+|||+|+..+...|.
T Consensus 75 dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 75 DGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHH
Confidence 3456799999999985431 11 1111 2466678999999999999999999999999999999999
Q ss_pred HHHHhcccCCcCCCC-CceecCCCCCCccchhhhhccC-c-hHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhc
Q 001552 915 RFLFTLKQDGKALPD-GPVVISPDGLFPSLFREVIRRA-P-HEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKV 991 (1055)
Q Consensus 915 ~yL~~i~Q~g~~LP~-GPVLLSPd~Lf~AL~REVI~Kk-P-eeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraV 991 (1055)
+||. ..++|. .-|+|.+ .-+.+ . -+||.++.+.|..- +--+.+-+|+..+|. .
T Consensus 155 ~nL~-----~~G~~~~~~LiLR~----------~~d~~~~~~~yKs~~R~~l~~~----GYrIv~~iGDq~sDl-----~ 210 (229)
T TIGR01675 155 DNLI-----NAGFTGWKHLILRG----------LEDSNKTVVTYKSEVRKSLMEE----GYRIWGNIGDQWSDL-----L 210 (229)
T ss_pred HHHH-----HcCCCCcCeeeecC----------CCCCCchHhHHHHHHHHHHHhC----CceEEEEECCChHHh-----c
Confidence 9996 356773 3344433 11222 2 37899998887754 345678999999998 4
Q ss_pred CCCCC-cEEEE
Q 001552 992 GIPRG-KIFII 1001 (1055)
Q Consensus 992 GIP~s-RIFiI 1001 (1055)
|-+.+ |+|-.
T Consensus 211 G~~~~~RtFKL 221 (229)
T TIGR01675 211 GSPPGRRTFKL 221 (229)
T ss_pred CCCccCceeeC
Confidence 55665 88853
No 11
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=98.44 E-value=8.5e-07 Score=86.17 Aligned_cols=107 Identities=17% Similarity=0.194 Sum_probs=77.1
Q ss_pred cEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHH------------HHHHHHHhc
Q 001552 853 RIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAY------------HTRRFLFTL 920 (1055)
Q Consensus 853 KIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd------------~TR~yL~~i 920 (1055)
|+|++||||||+..+ .| ++. .+-.++++.+..+.++++|+.|+++|||+..... .|..||.
T Consensus 2 K~i~~DiDGTL~~~~-~~---~y~-~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~-- 74 (126)
T TIGR01689 2 KRLVMDLDNTITLTE-NG---DYA-NVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLN-- 74 (126)
T ss_pred CEEEEeCCCCcccCC-CC---ccc-ccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHH--
Confidence 689999999998643 11 111 1336789999999999999999999999998877 9999996
Q ss_pred ccCCcCCCCCceecCCCC-CCccchhhhhccCchHHHHHHHHHHHhhCCC
Q 001552 921 KQDGKALPDGPVVISPDG-LFPSLFREVIRRAPHEFKIACLEDIKALFPS 969 (1055)
Q Consensus 921 ~Q~g~~LP~GPVLLSPd~-Lf~AL~REVI~KkPeeFKIacL~dIk~LFP~ 969 (1055)
.+++|--.|++.... ....|++.=-.=||++|..--...|+.|...
T Consensus 75 ---k~~ipYd~l~~~kp~~~~~~~~~dD~~ir~~~~~~~~~~~~~~~~~~ 121 (126)
T TIGR01689 75 ---QHNVPYDEIYVGKPWCGHDGFYVDDRAIRPSEFSSLTYDEINTLTKI 121 (126)
T ss_pred ---HcCCCCceEEeCCCcCCCCCceecchhhCHHHHHhcCHHHHHHHHhh
Confidence 588997666665421 1112333322237889987778888877643
No 12
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=98.39 E-value=1.3e-06 Score=94.67 Aligned_cols=127 Identities=15% Similarity=0.132 Sum_probs=87.4
Q ss_pred CCcEEEEecCCccccc-cccc-ccc---c-----------ccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHH
Q 001552 851 NTRIVISDVDGTITKS-DVLG-QFM---P-----------LVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTR 914 (1055)
Q Consensus 851 ~dKIVISDIDGTITKS-DvlG-hIl---P-----------~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR 914 (1055)
+.-+||+|||+|+..+ .-.+ |.. + ..++..+-||+.+||+.++++|++|+|||+|+..+...|.
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~ 179 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTE 179 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH
Confidence 3468999999999831 1111 111 0 1234445899999999999999999999999999999999
Q ss_pred HHHHhcccCCcCCCC-CceecCCCCCCccchhhhhcc--Cc-hHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHh
Q 001552 915 RFLFTLKQDGKALPD-GPVVISPDGLFPSLFREVIRR--AP-HEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLK 990 (1055)
Q Consensus 915 ~yL~~i~Q~g~~LP~-GPVLLSPd~Lf~AL~REVI~K--kP-eeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYra 990 (1055)
+||. ..++|. --|+|.+ .-+. .. -.||.+..+.+..- +--+.+.+|+.-+|.
T Consensus 180 ~NL~-----kaGy~~~~~LiLR~----------~~D~~~~~av~yKs~~R~~li~e----GYrIv~~iGDq~sDl----- 235 (275)
T TIGR01680 180 ANLK-----KAGYHTWEKLILKD----------PQDNSAENAVEYKTAARAKLIQE----GYNIVGIIGDQWNDL----- 235 (275)
T ss_pred HHHH-----HcCCCCcceeeecC----------CCCCccchhHHHHHHHHHHHHHc----CceEEEEECCCHHhc-----
Confidence 9996 356763 2244432 2121 12 27898887776653 345677899999998
Q ss_pred cCCCC--CcEEEE
Q 001552 991 VGIPR--GKIFII 1001 (1055)
Q Consensus 991 VGIP~--sRIFiI 1001 (1055)
.|-+. .|.|=+
T Consensus 236 ~G~~~g~~RtFKL 248 (275)
T TIGR01680 236 KGEHRGAIRSFKL 248 (275)
T ss_pred cCCCccCcceecC
Confidence 46553 577753
No 13
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=98.36 E-value=8.5e-07 Score=93.68 Aligned_cols=123 Identities=20% Similarity=0.265 Sum_probs=80.9
Q ss_pred cEEEEecCCccccc-cc--cc-c-ccc----cc------------CC--CCChhhHHHHHHHHHHcCCeEEEEccchhhH
Q 001552 853 RIVISDVDGTITKS-DV--LG-Q-FMP----LV------------GV--DWSQTGVAHLFSAIKENGYQLLFLSARAIVQ 909 (1055)
Q Consensus 853 KIVISDIDGTITKS-Dv--lG-h-IlP----~L------------Gk--DWTH~GVAkLYskI~~NGYkILYLSARpIgq 909 (1055)
..|++||||||+.| .. .| + +.| ++ .. --+.+|+.+|++.++++|++|+|+|+|+-..
T Consensus 64 ~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k 143 (237)
T PRK11009 64 MAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGRTATK 143 (237)
T ss_pred cEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcc
Confidence 37999999999974 31 22 1 111 10 11 1246679999999999999999999998777
Q ss_pred HHHHHHHHHhcccCCcCCCCC---ceecCCCCCCccchhhhhccCchHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHH
Q 001552 910 AYHTRRFLFTLKQDGKALPDG---PVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEI 986 (1055)
Q Consensus 910 Ad~TR~yL~~i~Q~g~~LP~G---PVLLSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~ 986 (1055)
.+.|..+|. +..+||.- ++++.-+. ..+|+ |..++++ + ...+| +|++.+|+.
T Consensus 144 ~~~t~~~Ll----k~~gip~~~~f~vil~gd~----------~~K~~--K~~~l~~---~----~i~I~--IGDs~~Di~ 198 (237)
T PRK11009 144 TETVSKTLA----DDFHIPADNMNPVIFAGDK----------PGQYT--KTQWLKK---K----NIRIF--YGDSDNDIT 198 (237)
T ss_pred cHHHHHHHH----HHcCCCcccceeEEEcCCC----------CCCCC--HHHHHHh---c----CCeEE--EcCCHHHHH
Confidence 777777775 25678733 23332211 11232 3344442 2 12344 999999999
Q ss_pred HHHhcCCCCCcEEE
Q 001552 987 SYLKVGIPRGKIFI 1000 (1055)
Q Consensus 987 AYraVGIP~sRIFi 1000 (1055)
+-+++|+..-|++-
T Consensus 199 aA~~AGi~~I~v~~ 212 (237)
T PRK11009 199 AAREAGARGIRILR 212 (237)
T ss_pred HHHHcCCcEEEEec
Confidence 99999999877743
No 14
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=98.25 E-value=2.7e-07 Score=96.28 Aligned_cols=135 Identities=19% Similarity=0.278 Sum_probs=90.5
Q ss_pred CCCcEEEEecCCcccccc-ccc-c------ccc-------ccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHH
Q 001552 850 WNTRIVISDVDGTITKSD-VLG-Q------FMP-------LVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTR 914 (1055)
Q Consensus 850 ~~dKIVISDIDGTITKSD-vlG-h------IlP-------~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR 914 (1055)
....+||+|||+|+..+- ..+ + +.+ .-|++.+-||+.+||+.++++|.+|+|||+|+..+...|.
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~ 149 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQREATE 149 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHH
Confidence 456789999999987321 101 1 112 2366677899999999999999999999999999999999
Q ss_pred HHHHhcccCCcCCCC-CceecCCCCCCccchhhhhccCchHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCC
Q 001552 915 RFLFTLKQDGKALPD-GPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGI 993 (1055)
Q Consensus 915 ~yL~~i~Q~g~~LP~-GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGI 993 (1055)
.+|.. .++|. -.++|.+..-. -.+.--.||......|..- +.-+.+-||+..+|....+..+.
T Consensus 150 ~nL~~-----~G~~~~~~l~lr~~~~~-------~~~~~~~yK~~~r~~i~~~----Gy~Ii~~iGD~~~D~~~~~~~~~ 213 (229)
T PF03767_consen 150 KNLKK-----AGFPGWDHLILRPDKDP-------SKKSAVEYKSERRKEIEKK----GYRIIANIGDQLSDFSGAKTAGA 213 (229)
T ss_dssp HHHHH-----HTTSTBSCGEEEEESST-------SS------SHHHHHHHHHT----TEEEEEEEESSGGGCHCTHHHHH
T ss_pred HHHHH-----cCCCccchhcccccccc-------ccccccccchHHHHHHHHc----CCcEEEEeCCCHHHhhccccccc
Confidence 99972 23543 33333332210 0112237899999999876 23567789999999998444444
Q ss_pred CCCcEEE
Q 001552 994 PRGKIFI 1000 (1055)
Q Consensus 994 P~sRIFi 1000 (1055)
...|.|+
T Consensus 214 ~~~r~f~ 220 (229)
T PF03767_consen 214 RAERWFK 220 (229)
T ss_dssp HHTTEEE
T ss_pred ccceEEE
Confidence 3366665
No 15
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.09 E-value=1e-05 Score=87.04 Aligned_cols=116 Identities=16% Similarity=0.206 Sum_probs=80.6
Q ss_pred CCCcEEEEecCCccccccc-cc-cc---ccc----------cCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHH
Q 001552 850 WNTRIVISDVDGTITKSDV-LG-QF---MPL----------VGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTR 914 (1055)
Q Consensus 850 ~~dKIVISDIDGTITKSDv-lG-hI---lP~----------LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR 914 (1055)
....+||+|||+|+..+.- .| |+ .|. .+...+.||+.++++.++++|++++|+|+|+..+...|.
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~ 152 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATL 152 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHH
Confidence 3467999999999986541 11 11 121 122335799999999999999999999999999999999
Q ss_pred HHHHhcccCCcCCCC---CceecCCCCCCccchhhhhccCchHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHh
Q 001552 915 RFLFTLKQDGKALPD---GPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLK 990 (1055)
Q Consensus 915 ~yL~~i~Q~g~~LP~---GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYra 990 (1055)
.+|. ..+||. -+|++.+++ ..|-..+..|..- + .+++-+|++..|......
T Consensus 153 ~~Lk-----k~Gi~~~~~d~lllr~~~---------------~~K~~rr~~I~~~----y-~Ivl~vGD~~~Df~~~~~ 206 (266)
T TIGR01533 153 KNLK-----RFGFPQADEEHLLLKKDK---------------SSKESRRQKVQKD----Y-EIVLLFGDNLLDFDDFFY 206 (266)
T ss_pred HHHH-----HcCcCCCCcceEEeCCCC---------------CCcHHHHHHHHhc----C-CEEEEECCCHHHhhhhhc
Confidence 9996 467764 355554321 1344555556543 3 346679999999977544
No 16
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=97.97 E-value=3.9e-05 Score=71.49 Aligned_cols=121 Identities=18% Similarity=0.221 Sum_probs=71.1
Q ss_pred cEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhH-----HHHHHHHHHhcccCCcCC
Q 001552 853 RIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQ-----AYHTRRFLFTLKQDGKAL 927 (1055)
Q Consensus 853 KIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgq-----Ad~TR~yL~~i~Q~g~~L 927 (1055)
|++++|+||||+.+ .+.+. ..+.-...+||.++...+++.||++..+|.++... ...++.+|. ..++
T Consensus 1 k~~~~D~dgtL~~~--~~~~~-~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~-----~~~l 72 (132)
T TIGR01662 1 KGVVLDLDGTLTDD--VPYVD-DEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLE-----ELGV 72 (132)
T ss_pred CEEEEeCCCceecC--CCCCC-CHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHH-----HCCC
Confidence 68999999999942 11111 11222347999999999999999999999998443 334555554 2344
Q ss_pred CCCceecCCCCCCccchhhhhccCchHHHHHHHHHHHhhCCCCCCCEEEccCC-CchhHHHHHhcCCCC
Q 001552 928 PDGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGN-RDTDEISYLKVGIPR 995 (1055)
Q Consensus 928 P~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGN-R~TDv~AYraVGIP~ 995 (1055)
+.=.+..+ . ....++|+.|+..+ +.+.. +++ ...+| +|+ ..+|+.+-+++|+..
T Consensus 73 ~~~~~~~~------~---~~~KP~~~~~~~~~-~~~~~-~~~-~~~v~--IGD~~~~Di~~A~~~Gi~~ 127 (132)
T TIGR01662 73 PIDVLYAC------P---HCRKPKPGMFLEAL-KRFNE-IDP-EESVY--VGDQDLTDLQAAKRAGLAF 127 (132)
T ss_pred CEEEEEEC------C---CCCCCChHHHHHHH-HHcCC-CCh-hheEE--EcCCCcccHHHHHHCCCeE
Confidence 31011111 1 11123344454322 22111 222 23444 788 599999999999863
No 17
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.83 E-value=0.0001 Score=78.10 Aligned_cols=122 Identities=19% Similarity=0.197 Sum_probs=74.8
Q ss_pred cEEEEecCCccccccc---cccc--cc-----ccCCC-----------CCh--hhHHHHHHHHHHcCCeEEEEccchhh-
Q 001552 853 RIVISDVDGTITKSDV---LGQF--MP-----LVGVD-----------WSQ--TGVAHLFSAIKENGYQLLFLSARAIV- 908 (1055)
Q Consensus 853 KIVISDIDGTITKSDv---lGhI--lP-----~LGkD-----------WTH--~GVAkLYskI~~NGYkILYLSARpIg- 908 (1055)
..|||||||||+.|.. .|.- .+ ..|.+ -+- +|+.+|+..++++|+++.|+|+|...
T Consensus 64 ~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k 143 (237)
T TIGR01672 64 IAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGK 143 (237)
T ss_pred eEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCc
Confidence 3799999999999987 5532 11 11222 123 34999999999999999999999543
Q ss_pred HHHHHHHHHHhcccCCcCCCCC-ceecCCCCCCccchhhhhccCchHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHH
Q 001552 909 QAYHTRRFLFTLKQDGKALPDG-PVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEIS 987 (1055)
Q Consensus 909 qAd~TR~yL~~i~Q~g~~LP~G-PVLLSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~A 987 (1055)
-...++..++ ..+||.- ++++..+.. ..++|+ |..+++ .. ...+ -||++.+|+.+
T Consensus 144 ~~~~a~~ll~-----~lGi~~~f~~i~~~d~~--------~~~Kp~--~~~~l~---~~----~i~i--~vGDs~~DI~a 199 (237)
T TIGR01672 144 TDTVSKTLAK-----NFHIPAMNPVIFAGDKP--------GQYQYT--KTQWIQ---DK----NIRI--HYGDSDNDITA 199 (237)
T ss_pred CHHHHHHHHH-----HhCCchheeEEECCCCC--------CCCCCC--HHHHHH---hC----CCeE--EEeCCHHHHHH
Confidence 1223333332 3455531 333332211 113455 333343 21 1234 49999999999
Q ss_pred HHhcCCCCCcE
Q 001552 988 YLKVGIPRGKI 998 (1055)
Q Consensus 988 YraVGIP~sRI 998 (1055)
-+++|+..-++
T Consensus 200 Ak~AGi~~I~V 210 (237)
T TIGR01672 200 AKEAGARGIRI 210 (237)
T ss_pred HHHCCCCEEEE
Confidence 99999987666
No 18
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=97.81 E-value=0.00014 Score=70.88 Aligned_cols=108 Identities=16% Similarity=0.158 Sum_probs=62.9
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecC-------CCCCCccchhhhhccCchH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVIS-------PDGLFPSLFREVIRRAPHE 954 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLS-------Pd~Lf~AL~REVI~KkPee 954 (1055)
.+|+.++...++++||++..+|+........+-..+. +.. .+ +-.++. |+... . . .++
T Consensus 82 ~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g-~~~---~~--~~~~~~~~~g~~~p~~~~---~---~--~~~- 146 (201)
T TIGR01491 82 RDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLN-PDY---VY--SNELVFDEKGFIQPDGIV---R---V--TFD- 146 (201)
T ss_pred CccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhC-CCe---EE--EEEEEEcCCCeEecceee---E---E--ccc-
Confidence 5788888899999999999999987655544433331 100 00 000111 11100 0 0 001
Q ss_pred HHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCCCcEEEECCCCceee
Q 001552 955 FKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPRGKIFIINPKGEVVV 1009 (1055)
Q Consensus 955 FKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~sRIFiINpkGel~~ 1009 (1055)
-|.+.++.++..+.......+ .+|++.+|+.+-+.+|+ -|.+|+.+.+..
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i-~iGDs~~D~~~a~~ag~----~~a~~~~~~~~~ 196 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETV-AVGDSKNDLPMFEVADI----SISLGDEGHADY 196 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEE-EEcCCHhHHHHHHhcCC----eEEECCCccchh
Confidence 144455555544322111222 48999999999999998 479999998853
No 19
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=97.66 E-value=0.00015 Score=72.60 Aligned_cols=109 Identities=16% Similarity=0.166 Sum_probs=57.5
Q ss_pred ChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecC----CCCCCcc-chhhhhccCchHH
Q 001552 881 SQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVIS----PDGLFPS-LFREVIRRAPHEF 955 (1055)
Q Consensus 881 TH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLS----Pd~Lf~A-L~REVI~KkPeeF 955 (1055)
..+|+.++++.++++||++.-+|+.... ..+.+++ ..+++. ++-+ .++.+.. .......+. -
T Consensus 86 ~~~g~~~~l~~l~~~g~~~~IvS~~~~~---~~~~~l~-----~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~ 152 (219)
T TIGR00338 86 LTEGAEELVKTLKEKGYKVAVISGGFDL---FAEHVKD-----KLGLDA--AFANRLEVEDGKLTGLVEGPIVDAS---Y 152 (219)
T ss_pred cCCCHHHHHHHHHHCCCEEEEECCCcHH---HHHHHHH-----HcCCCc--eEeeEEEEECCEEEEEecCcccCCc---c
Confidence 3678888999999999999999996543 3334442 122332 1111 0111100 011111111 1
Q ss_pred HHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCCCcEEEECCCCce
Q 001552 956 KIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPRGKIFIINPKGEV 1007 (1055)
Q Consensus 956 KIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~sRIFiINpkGel 1007 (1055)
|...++.+...+.-...-.+ .+|+..+|+.+.+++|++ +.+|+.-.+
T Consensus 153 k~~~~~~~~~~~~~~~~~~i-~iGDs~~Di~aa~~ag~~----i~~~~~~~~ 199 (219)
T TIGR00338 153 KGKTLLILLRKEGISPENTV-AVGDGANDLSMIKAAGLG----IAFNAKPKL 199 (219)
T ss_pred cHHHHHHHHHHcCCCHHHEE-EEECCHHHHHHHHhCCCe----EEeCCCHHH
Confidence 33333333333321111233 388999999999999997 356765433
No 20
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=97.54 E-value=0.00048 Score=68.77 Aligned_cols=129 Identities=16% Similarity=0.340 Sum_probs=78.3
Q ss_pred CCCcEEEEecCCcccccccccccccccCCCCC--hhhHHHHHHHHHHcCCeEEEEccchhh---------HHHHHHHHHH
Q 001552 850 WNTRIVISDVDGTITKSDVLGQFMPLVGVDWS--QTGVAHLFSAIKENGYQLLFLSARAIV---------QAYHTRRFLF 918 (1055)
Q Consensus 850 ~~dKIVISDIDGTITKSDvlGhIlP~LGkDWT--H~GVAkLYskI~~NGYkILYLSARpIg---------qAd~TR~yL~ 918 (1055)
...|++++|+||||+..+- ++..+.-=.+|. .+||.+++..++++||++.-+|+.+.. ....++..|+
T Consensus 11 ~~~k~~~~D~Dgtl~~~~~-~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~ 89 (166)
T TIGR01664 11 PQSKVAAFDLDGTLITTRS-GKVFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLE 89 (166)
T ss_pred CcCcEEEEeCCCceEecCC-CCcccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHH
Confidence 3579999999999998542 223444445884 699999999999999999999976532 2234555664
Q ss_pred hcccCCcCCCCCceecCCCCCCccchhhhhccCchHHHHHHHHHHHhhCCCCCCCEEEccCCCc--------hhHHHHHh
Q 001552 919 TLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRD--------TDEISYLK 990 (1055)
Q Consensus 919 ~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGNR~--------TDv~AYra 990 (1055)
..+++. -.+...+.. ..| .++|+.|+.++ +.+...+.+ ..-+| .|++. +|+.+=++
T Consensus 90 -----~~gl~~-~~ii~~~~~---~~~---KP~p~~~~~~~-~~~~~~~~~-~~~v~--VGD~~~~~~~~~~~Di~aA~~ 153 (166)
T TIGR01664 90 -----KLKVPI-QVLAATHAG---LYR---KPMTGMWEYLQ-SQYNSPIKM-TRSFY--VGDAAGRKLDFSDADIKFAKN 153 (166)
T ss_pred -----HcCCCE-EEEEecCCC---CCC---CCccHHHHHHH-HHcCCCCCc-hhcEE--EECCCCCCCCCchhHHHHHHH
Confidence 345553 122222110 111 22334555332 222100112 24566 67775 69999999
Q ss_pred cCCCC
Q 001552 991 VGIPR 995 (1055)
Q Consensus 991 VGIP~ 995 (1055)
+||+.
T Consensus 154 aGi~~ 158 (166)
T TIGR01664 154 LGLEF 158 (166)
T ss_pred CCCCc
Confidence 99875
No 21
>PLN02954 phosphoserine phosphatase
Probab=97.47 E-value=0.00038 Score=69.90 Aligned_cols=100 Identities=15% Similarity=0.169 Sum_probs=56.9
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCcee-----cCCCCCCccc-hhhhhccCchHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVV-----ISPDGLFPSL-FREVIRRAPHEF 955 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVL-----LSPd~Lf~AL-~REVI~KkPeeF 955 (1055)
.||+.++++.++++|+++.-+|+..-..+....+.+ +++.=+++ +..++.+..+ ..+.. ....-
T Consensus 86 ~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~--------gi~~~~~~~~~~~~~~~g~~~g~~~~~~~--~~~~~ 155 (224)
T PLN02954 86 SPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAIL--------GIPPENIFANQILFGDSGEYAGFDENEPT--SRSGG 155 (224)
T ss_pred CccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHh--------CCChhhEEEeEEEEcCCCcEECccCCCcc--cCCcc
Confidence 589999999999999999999998765554443333 34321122 2222211111 00000 00122
Q ss_pred HHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCC
Q 001552 956 KIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIP 994 (1055)
Q Consensus 956 KIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP 994 (1055)
|-++++.++..... ...+ .||++.+|+.|.++.|+.
T Consensus 156 K~~~i~~~~~~~~~-~~~i--~iGDs~~Di~aa~~~~~~ 191 (224)
T PLN02954 156 KAEAVQHIKKKHGY-KTMV--MIGDGATDLEARKPGGAD 191 (224)
T ss_pred HHHHHHHHHHHcCC-CceE--EEeCCHHHHHhhhcCCCC
Confidence 55666666665432 2233 599999999995555553
No 22
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=97.36 E-value=0.0009 Score=66.22 Aligned_cols=130 Identities=15% Similarity=0.184 Sum_probs=74.9
Q ss_pred cEEEEecCCcccccccccccccccC--CCC-ChhhHHHHHHHHHHcCCeEEEEccchh--------hHHHHHHHHHHhcc
Q 001552 853 RIVISDVDGTITKSDVLGQFMPLVG--VDW-SQTGVAHLFSAIKENGYQLLFLSARAI--------VQAYHTRRFLFTLK 921 (1055)
Q Consensus 853 KIVISDIDGTITKSDvlGhIlP~LG--kDW-TH~GVAkLYskI~~NGYkILYLSARpI--------gqAd~TR~yL~~i~ 921 (1055)
|++.+|.||||++. + +++. .+| .-|||.++...++++||++.-+|+-+- ......+.|+.++.
T Consensus 2 ~~~~~D~Dgtl~~~----~--~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l 75 (176)
T TIGR00213 2 KAIFLDRDGTINID----H--GYVHEIDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSL 75 (176)
T ss_pred CEEEEeCCCCEeCC----C--CCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHH
Confidence 78999999999952 1 2222 244 368999999999999999999998652 22334456665543
Q ss_pred cCCcCCCCCceecCCCCCCc--cchhhhhccCc--hHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCC
Q 001552 922 QDGKALPDGPVVISPDGLFP--SLFREVIRRAP--HEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPR 995 (1055)
Q Consensus 922 Q~g~~LP~GPVLLSPd~Lf~--AL~REVI~KkP--eeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~ 995 (1055)
+ ..+++---++.++..... -+..+...+|| +.|+.++ +.+ .+ .+ ..-+| +|++.+|+.+=+++|+..
T Consensus 76 ~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~-~~~-~~-~~-~~~v~--VGDs~~Di~aA~~aG~~~ 146 (176)
T TIGR00213 76 A-ERDVDLDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQAR-KEL-HI-DM-AQSYM--VGDKLEDMQAGVAAKVKT 146 (176)
T ss_pred H-HcCCCccEEEECCCCCcccccccCCCCCCCCCHHHHHHHH-HHc-Cc-Ch-hhEEE--EcCCHHHHHHHHHCCCcE
Confidence 2 123331122222211000 00011222344 4555443 221 11 11 22344 899999999999999873
No 23
>PRK10976 putative hydrolase; Provisional
Probab=97.33 E-value=0.00081 Score=69.58 Aligned_cols=65 Identities=20% Similarity=0.331 Sum_probs=47.1
Q ss_pred cEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCce
Q 001552 853 RIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPV 932 (1055)
Q Consensus 853 KIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPV 932 (1055)
|+|++|+||||..++- .+. +...+..++++++|++|+..|+|+...+ +.++..+ ++ .+|+
T Consensus 3 kli~~DlDGTLl~~~~--~is---------~~~~~ai~~l~~~G~~~~iaTGR~~~~~---~~~~~~l-----~~-~~~~ 62 (266)
T PRK10976 3 QVVASDLDGTLLSPDH--TLS---------PYAKETLKLLTARGIHFVFATGRHHVDV---GQIRDNL-----EI-KSYM 62 (266)
T ss_pred eEEEEeCCCCCcCCCC--cCC---------HHHHHHHHHHHHCCCEEEEEcCCChHHH---HHHHHhc-----CC-CCeE
Confidence 7899999999998652 232 5567888999999999999999998743 4555422 23 3566
Q ss_pred ecCCC
Q 001552 933 VISPD 937 (1055)
Q Consensus 933 LLSPd 937 (1055)
++.-.
T Consensus 63 I~~NG 67 (266)
T PRK10976 63 ITSNG 67 (266)
T ss_pred EEcCC
Confidence 55443
No 24
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=97.31 E-value=0.00069 Score=65.37 Aligned_cols=126 Identities=17% Similarity=0.236 Sum_probs=71.1
Q ss_pred cEEEEecCCcccccccccccccccCCCC-ChhhHHHHHHHHHHcCCeEEEEccchhh------HH------HHHHHHHHh
Q 001552 853 RIVISDVDGTITKSDVLGQFMPLVGVDW-SQTGVAHLFSAIKENGYQLLFLSARAIV------QA------YHTRRFLFT 919 (1055)
Q Consensus 853 KIVISDIDGTITKSDvlGhIlP~LGkDW-TH~GVAkLYskI~~NGYkILYLSARpIg------qA------d~TR~yL~~ 919 (1055)
+++|+|+||||+..... .... ...+| ..+|+.+++..++++||++.-+|+.+.. .. ..++..|+
T Consensus 1 ~~~~~d~dgtl~~~~~~-~~~~-~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~- 77 (147)
T TIGR01656 1 PALFLDRDGVINEDTVS-DYPR-SLDDWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLR- 77 (147)
T ss_pred CeEEEeCCCceeccCCc-ccCC-CHHHeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHH-
Confidence 57999999999975432 1111 22233 3799999999999999999999997631 11 34444443
Q ss_pred cccCCcCCCCCceecCCCCCCccchhhhhccCchHHHHHHHHHHHhhCCCC-CCCEEEccCCCchhHHHHHhcCCC
Q 001552 920 LKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKALFPSD-CNPFYAGFGNRDTDEISYLKVGIP 994 (1055)
Q Consensus 920 i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~LFP~~-~nPFyAGFGNR~TDv~AYraVGIP 994 (1055)
..+|+.=..+... .+.+-....-.++|+.|... +..++.. ..-+| +|++..|+.+=+++||.
T Consensus 78 ----~~~l~~~~~~~~~--~~~~~~~~~~KP~~~~~~~~-----~~~~~~~~~e~i~--IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 78 ----QLGVAVDGVLFCP--HHPADNCSCRKPKPGLILEA-----LKRLGVDASRSLV--VGDRLRDLQAARNAGLA 140 (147)
T ss_pred ----hCCCceeEEEECC--CCCCCCCCCCCCCHHHHHHH-----HHHcCCChHHEEE--EcCCHHHHHHHHHCCCC
Confidence 2344410111111 00000000012333334333 3333322 23444 89999999999999985
No 25
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.28 E-value=0.0017 Score=64.22 Aligned_cols=129 Identities=13% Similarity=0.140 Sum_probs=72.7
Q ss_pred CcEEEEecCCcccccccccccccccCCCC-ChhhHHHHHHHHHHcCCeEEEEccchh--------hHHHHHHHHHHhccc
Q 001552 852 TRIVISDVDGTITKSDVLGQFMPLVGVDW-SQTGVAHLFSAIKENGYQLLFLSARAI--------VQAYHTRRFLFTLKQ 922 (1055)
Q Consensus 852 dKIVISDIDGTITKSDvlGhIlP~LGkDW-TH~GVAkLYskI~~NGYkILYLSARpI--------gqAd~TR~yL~~i~Q 922 (1055)
-|++++|-||||... .. .+...+ ..| ..+||.++.+.++++||++.-+|..+- .+....++|+..+-+
T Consensus 3 ~~~~~~d~~~t~~~~-~~-~~~~~~-~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 79 (181)
T PRK08942 3 MKAIFLDRDGVINVD-SD-GYVKSP-DEWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLA 79 (181)
T ss_pred ccEEEEECCCCcccC-Cc-cccCCH-HHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHH
Confidence 489999999999763 11 111111 133 489999999999999999999998752 122233444443222
Q ss_pred CCcCCCCCceecCCCCCCccchhhhhccCch--HHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCC
Q 001552 923 DGKALPDGPVVISPDGLFPSLFREVIRRAPH--EFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIP 994 (1055)
Q Consensus 923 ~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPe--eFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP 994 (1055)
..+++--.++.+.+.. ..++..++|+ .|..++ +.+ .+ ++ ..-+ .+|++.+|+.+-+++|+.
T Consensus 80 -~~g~~f~~i~~~~~~~----~~~~~~~KP~p~~~~~~~-~~l-~~-~~-~~~~--~VgDs~~Di~~A~~aG~~ 142 (181)
T PRK08942 80 -DRGGRLDGIYYCPHHP----EDGCDCRKPKPGMLLSIA-ERL-NI-DL-AGSP--MVGDSLRDLQAAAAAGVT 142 (181)
T ss_pred -HcCCccceEEECCCCC----CCCCcCCCCCHHHHHHHH-HHc-CC-Ch-hhEE--EEeCCHHHHHHHHHCCCe
Confidence 1233222233332110 0112233454 454433 222 22 22 1233 489999999999999983
No 26
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=97.25 E-value=0.00085 Score=65.74 Aligned_cols=120 Identities=15% Similarity=0.179 Sum_probs=69.2
Q ss_pred cEEEEecCCcccccccc-cccccccCCCC-ChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCC
Q 001552 853 RIVISDVDGTITKSDVL-GQFMPLVGVDW-SQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDG 930 (1055)
Q Consensus 853 KIVISDIDGTITKSDvl-GhIlP~LGkDW-TH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~G 930 (1055)
|+|++||||||+...+. ..-...+++ | ..++. ..+.++++||++..+|+++-..+ +.+|. ..+++.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~-~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~---~~~l~-----~~gi~~- 69 (154)
T TIGR01670 2 RLLILDVDGVLTDGKIYYTNNGEEIKA-FNVRDGY--GIRCALKSGIEVAIITGRKAKLV---EDRCK-----TLGITH- 69 (154)
T ss_pred eEEEEeCceeEEcCeEEECCCCcEEEE-EechhHH--HHHHHHHCCCEEEEEECCCCHHH---HHHHH-----HcCCCE-
Confidence 78999999999963321 000011222 3 22343 68889999999999999987644 34453 233431
Q ss_pred ceecCCCCCCccchhhhhccCchHHHHHHHHHHHhhCCCC-CCCEEEccCCCchhHHHHHhcCCCCCcEEEECCCCce
Q 001552 931 PVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKALFPSD-CNPFYAGFGNRDTDEISYLKVGIPRGKIFIINPKGEV 1007 (1055)
Q Consensus 931 PVLLSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~LFP~~-~nPFyAGFGNR~TDv~AYraVGIP~sRIFiINpkGel 1007 (1055)
+ |.. ...+|+ .+..++..+.-. ...+ .+|++.+|+.+-+.+|++ +.+-|.+..+
T Consensus 70 -~-------~~~-----~~~k~~-----~~~~~~~~~~~~~~~~~--~vGDs~~D~~~~~~ag~~---~~v~~~~~~~ 124 (154)
T TIGR01670 70 -L-------YQG-----QSNKLI-----AFSDILEKLALAPENVA--YIGDDLIDWPVMEKVGLS---VAVADAHPLL 124 (154)
T ss_pred -E-------Eec-----ccchHH-----HHHHHHHHcCCCHHHEE--EECCCHHHHHHHHHCCCe---EecCCcCHHH
Confidence 1 111 122333 333333322211 1233 499999999999999985 5444555443
No 27
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=97.21 E-value=0.0012 Score=65.47 Aligned_cols=94 Identities=17% Similarity=0.213 Sum_probs=56.9
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCC---CceecCCCCCCccchhhhhccCchHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPD---GPVVISPDGLFPSLFREVIRRAPHEFKIA 958 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~---GPVLLSPd~Lf~AL~REVI~KkPeeFKIa 958 (1055)
.||+.++...++++ |++..+|+.....+. .+|. ..+++. -.+....+..+. +.. ...|+ -|..
T Consensus 70 ~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~---~~l~-----~~gl~~~f~~~~~~~~~~~i~---~~~-~~~p~-~k~~ 135 (205)
T PRK13582 70 LPGAVEFLDWLRER-FQVVILSDTFYEFAG---PLMR-----QLGWPTLFCHSLEVDEDGMIT---GYD-LRQPD-GKRQ 135 (205)
T ss_pred CCCHHHHHHHHHhc-CCEEEEeCCcHHHHH---HHHH-----HcCCchhhcceEEECCCCeEE---Ccc-ccccc-hHHH
Confidence 59999999999999 999999998766444 4553 123331 112222222111 110 11232 4666
Q ss_pred HHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCC
Q 001552 959 CLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIP 994 (1055)
Q Consensus 959 cL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP 994 (1055)
+++.+... + ...+ .+|++.+|+.+.+++|+.
T Consensus 136 ~l~~~~~~-~--~~~v--~iGDs~~D~~~~~aa~~~ 166 (205)
T PRK13582 136 AVKALKSL-G--YRVI--AAGDSYNDTTMLGEADAG 166 (205)
T ss_pred HHHHHHHh-C--CeEE--EEeCCHHHHHHHHhCCCC
Confidence 67666543 2 2233 589999999999999974
No 28
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=97.11 E-value=0.0012 Score=66.33 Aligned_cols=110 Identities=18% Similarity=0.242 Sum_probs=64.5
Q ss_pred CCcEEEEecCCcccccccccccccc--cCCCCCh---hhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCc
Q 001552 851 NTRIVISDVDGTITKSDVLGQFMPL--VGVDWSQ---TGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGK 925 (1055)
Q Consensus 851 ~dKIVISDIDGTITKSDvlGhIlP~--LGkDWTH---~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~ 925 (1055)
.-|+|++|||||||...+ ++.+. .-..|.. .++ +.++++|+++..+|+|+...+ +.+++. .
T Consensus 20 ~ikli~~D~Dgtl~~~~i--~~~~~~~~~~~~~~~d~~~i----~~L~~~Gi~v~I~T~~~~~~v---~~~l~~-----l 85 (183)
T PRK09484 20 NIRLLICDVDGVFSDGLI--YMGNNGEELKAFNVRDGYGI----RCLLTSGIEVAIITGRKSKLV---EDRMTT-----L 85 (183)
T ss_pred CceEEEEcCCeeeecCEE--EEcCCCCEEEEEeccchHHH----HHHHHCCCEEEEEeCCCcHHH---HHHHHH-----c
Confidence 468899999999998643 11111 0112222 344 344579999999999976544 445531 2
Q ss_pred CCCCCceecCCCCCCccchhhhhccCchHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCC
Q 001552 926 ALPDGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIP 994 (1055)
Q Consensus 926 ~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP 994 (1055)
+++. +|.. ... |...|..++..+.-...- .+.+|+..+|+.+-+.+|+.
T Consensus 86 gl~~---------~f~g-----~~~-----k~~~l~~~~~~~gl~~~e-v~~VGDs~~D~~~a~~aG~~ 134 (183)
T PRK09484 86 GITH---------LYQG-----QSN-----KLIAFSDLLEKLAIAPEQ-VAYIGDDLIDWPVMEKVGLS 134 (183)
T ss_pred CCce---------eecC-----CCc-----HHHHHHHHHHHhCCCHHH-EEEECCCHHHHHHHHHCCCe
Confidence 2321 1111 011 445555555544322112 23599999999999999986
No 29
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.06 E-value=0.0022 Score=61.91 Aligned_cols=100 Identities=15% Similarity=0.082 Sum_probs=54.4
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCC--CceecC-----CCCCCccchhh--hhccCc
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPD--GPVVIS-----PDGLFPSLFRE--VIRRAP 952 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~--GPVLLS-----Pd~Lf~AL~RE--VI~KkP 952 (1055)
.+|+.+++..++++||++..+|+............+ +++. -.++.+ .++.+.....+ +....+
T Consensus 74 ~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~--------~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~ 145 (188)
T TIGR01489 74 DPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGI--------GEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCP 145 (188)
T ss_pred CccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHc--------CChhheeEEeccCceECCCCcEEEecCCCCccCcCC
Confidence 466777777888999999999997654333322221 1211 012222 22222111111 000111
Q ss_pred h-HHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCC
Q 001552 953 H-EFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGI 993 (1055)
Q Consensus 953 e-eFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGI 993 (1055)
. ..|.++++.++..+| ...+| +|++.+|+.|=+++++
T Consensus 146 ~g~~K~~~~~~~~~~~~--~~~i~--iGD~~~D~~aa~~~d~ 183 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPKY--QHIIY--IGDGVTDVCPAKLSDV 183 (188)
T ss_pred CCCCHHHHHHHHHhhcC--ceEEE--ECCCcchhchHhcCCc
Confidence 1 347778888776542 22444 7999999999877754
No 30
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=97.00 E-value=0.0025 Score=66.51 Aligned_cols=66 Identities=21% Similarity=0.374 Sum_probs=47.8
Q ss_pred cEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCce
Q 001552 853 RIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPV 932 (1055)
Q Consensus 853 KIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPV 932 (1055)
|+|++|+||||..++- ++ .+-..+..++++++|++|+..|+|+... ++.+++.+ ++ .+|+
T Consensus 3 kli~~DlDGTLl~~~~--~i---------~~~~~~ai~~l~~~G~~~~iaTGR~~~~---~~~~~~~l-----~~-~~~~ 62 (272)
T PRK15126 3 RLAAFDMDGTLLMPDH--HL---------GEKTLSTLARLRERDITLTFATGRHVLE---MQHILGAL-----SL-DAYL 62 (272)
T ss_pred cEEEEeCCCcCcCCCC--cC---------CHHHHHHHHHHHHCCCEEEEECCCCHHH---HHHHHHHc-----CC-CCcE
Confidence 7899999999998652 22 3556788889999999999999999874 45566422 33 3566
Q ss_pred ecCCCC
Q 001552 933 VISPDG 938 (1055)
Q Consensus 933 LLSPd~ 938 (1055)
++.-..
T Consensus 63 I~~NGa 68 (272)
T PRK15126 63 ITGNGT 68 (272)
T ss_pred EecCCc
Confidence 655433
No 31
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=96.98 E-value=0.0038 Score=62.42 Aligned_cols=129 Identities=19% Similarity=0.201 Sum_probs=74.1
Q ss_pred CcEEEEecCCcccccccccccccccCCC-CChhhHHHHHHHHHHcCCeEEEEccch--------h----hHHHHHHHHHH
Q 001552 852 TRIVISDVDGTITKSDVLGQFMPLVGVD-WSQTGVAHLFSAIKENGYQLLFLSARA--------I----VQAYHTRRFLF 918 (1055)
Q Consensus 852 dKIVISDIDGTITKSDvlGhIlP~LGkD-WTH~GVAkLYskI~~NGYkILYLSARp--------I----gqAd~TR~yL~ 918 (1055)
+|++.+|.||||+..-. +......-.+ +..+||.++...++++||++..+|..+ . .....++..|.
T Consensus 1 ~~~~~~d~dg~l~~~~~-~~~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~ 79 (161)
T TIGR01261 1 QKILFIDRDGTLIEEPP-SDFQVDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFR 79 (161)
T ss_pred CCEEEEeCCCCccccCC-CccccCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHH
Confidence 48999999999998321 2222222223 357999999999999999999999852 1 12334455553
Q ss_pred hcccCCcCCCCCceecCCCCCCccchhhhhccCchHHHHHHHHHHHhhCCCC-CCCEEEccCCCchhHHHHHhcCCCC
Q 001552 919 TLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKALFPSD-CNPFYAGFGNRDTDEISYLKVGIPR 995 (1055)
Q Consensus 919 ~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~LFP~~-~nPFyAGFGNR~TDv~AYraVGIP~ 995 (1055)
..+++-=-++.+|...- -++..++|+.-. +..+...+... ...+| +|++.+|+.+=+++|+..
T Consensus 80 -----~~gl~fd~ii~~~~~~~----~~~~~~KP~~~~---~~~~~~~~~~~~~e~l~--IGD~~~Di~~A~~aGi~~ 143 (161)
T TIGR01261 80 -----SQGIIFDDVLICPHFPD----DNCDCRKPKIKL---LEPYLKKNLIDKARSYV--IGDRETDMQLAENLGIRG 143 (161)
T ss_pred -----HCCCceeEEEECCCCCC----CCCCCCCCCHHH---HHHHHHHcCCCHHHeEE--EeCCHHHHHHHHHCCCeE
Confidence 34554111233331100 122233554221 22222222211 12444 789999999999999874
No 32
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=96.91 E-value=0.0028 Score=65.60 Aligned_cols=70 Identities=19% Similarity=0.355 Sum_probs=48.5
Q ss_pred CcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCc
Q 001552 852 TRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGP 931 (1055)
Q Consensus 852 dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GP 931 (1055)
-|+|++|+||||..++- .+ .+-..+..++++++|++|+..|+|+... ++.+++.+ +...|.+|
T Consensus 3 ~kli~~DlDGTLl~~~~--~i---------~~~~~~ai~~l~~~G~~~~iaTGR~~~~---~~~~~~~l---~~~~~~~~ 65 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDH--TI---------SPAVKQAIAAARAKGVNVVLTTGRPYAG---VHRYLKEL---HMEQPGDY 65 (270)
T ss_pred eEEEEEecCCcCcCCCC--cc---------CHHHHHHHHHHHHCCCEEEEecCCChHH---HHHHHHHh---CCCCCCCe
Confidence 37899999999998642 22 2556788999999999999999999874 45566422 22223345
Q ss_pred eecCCCC
Q 001552 932 VVISPDG 938 (1055)
Q Consensus 932 VLLSPd~ 938 (1055)
+++.-..
T Consensus 66 ~I~~NGa 72 (270)
T PRK10513 66 CITNNGA 72 (270)
T ss_pred EEEcCCe
Confidence 6555433
No 33
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=96.89 E-value=0.0028 Score=60.89 Aligned_cols=98 Identities=16% Similarity=0.150 Sum_probs=56.0
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCC--C-ceecCCCCCCccchhhhhc-cCc-hHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPD--G-PVVISPDGLFPSLFREVIR-RAP-HEFK 956 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~--G-PVLLSPd~Lf~AL~REVI~-KkP-eeFK 956 (1055)
.+|+.+++..++++|+++..+|+..-. .++.++.. .+++. + .+....++.+. ..... ..+ ..-|
T Consensus 75 ~~g~~~~l~~l~~~g~~~~ivS~~~~~---~i~~~~~~-----~g~~~~~~~~~~~~~~g~~~---g~~~~~~~~~~~~K 143 (177)
T TIGR01488 75 RPGARELISWLKERGIDTVIVSGGFDF---FVEPVAEK-----LGIDDVFANRLEFDDNGLLT---GPIEGQVNPEGECK 143 (177)
T ss_pred CcCHHHHHHHHHHCCCEEEEECCCcHH---HHHHHHHH-----cCCchheeeeEEECCCCEEe---CccCCcccCCcchH
Confidence 588999999999999999999997654 34444431 12221 0 11111121110 00001 112 2558
Q ss_pred HHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhc
Q 001552 957 IACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKV 991 (1055)
Q Consensus 957 IacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraV 991 (1055)
...|+.++...+..... ...||+..+|+.+.+.|
T Consensus 144 ~~~l~~~~~~~~~~~~~-~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 144 GKVLKELLEESKITLKK-IIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHHhCCCHHH-EEEEeCCHHHHHHHhcC
Confidence 88888877654322112 33699999999987653
No 34
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=96.88 E-value=0.0033 Score=65.57 Aligned_cols=115 Identities=19% Similarity=0.200 Sum_probs=83.0
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCch-HHHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPH-EFKIACL 960 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPe-eFKIacL 960 (1055)
.||+.+|...+++.|++++-+||-+..+++...+.|. ...=-+..+...++ -|...++...-. +-|...|
T Consensus 79 ~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg------~d~~~an~l~~~dG---~ltG~v~g~~~~~~~K~~~l 149 (212)
T COG0560 79 TPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLG------IDYVVANELEIDDG---KLTGRVVGPICDGEGKAKAL 149 (212)
T ss_pred CccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhC------CchheeeEEEEeCC---EEeceeeeeecCcchHHHHH
Confidence 6888889999999999999999999999999888883 22223344444443 122333333223 5699999
Q ss_pred HHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCCCcEEEECCCCceeee
Q 001552 961 EDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPRGKIFIINPKGEVVVN 1010 (1055)
Q Consensus 961 ~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~sRIFiINpkGel~~e 1010 (1055)
+++...+.....-. .+||+..+|.-+-..+|.+ +.+||++++...
T Consensus 150 ~~~~~~~g~~~~~~-~a~gDs~nDlpml~~ag~~----ia~n~~~~l~~~ 194 (212)
T COG0560 150 RELAAELGIPLEET-VAYGDSANDLPMLEAAGLP----IAVNPKPKLRAL 194 (212)
T ss_pred HHHHHHcCCCHHHe-EEEcCchhhHHHHHhCCCC----eEeCcCHHHHHH
Confidence 88888764421224 4899999999999999987 488999998643
No 35
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=96.86 E-value=0.003 Score=64.37 Aligned_cols=96 Identities=15% Similarity=0.147 Sum_probs=57.8
Q ss_pred ChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCch--H----
Q 001552 881 SQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPH--E---- 954 (1055)
Q Consensus 881 TH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPe--e---- 954 (1055)
..||+.+++..++++|+++.-+|+..-. .++..|+ .. ++.-.++.+...+-. ..+...+|+ .
T Consensus 75 l~pG~~e~l~~l~~~g~~~~IvS~~~~~---~i~~il~-----~~-~~~~~i~~n~~~~~~---~~~~~~kp~p~~~~~~ 142 (219)
T PRK09552 75 IREGFHEFVQFVKENNIPFYVVSGGMDF---FVYPLLQ-----GL-IPKEQIYCNGSDFSG---EYITITWPHPCDEHCQ 142 (219)
T ss_pred cCcCHHHHHHHHHHcCCeEEEECCCcHH---HHHHHHH-----Hh-CCcCcEEEeEEEecC---CeeEEeccCCcccccc
Confidence 3689999999999999999999998643 4445553 12 333233322110000 011112232 1
Q ss_pred -----HHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCC
Q 001552 955 -----FKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGI 993 (1055)
Q Consensus 955 -----FKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGI 993 (1055)
-|..+++.+... + .+.+ .+|++.+|+.|=+++|+
T Consensus 143 ~~~~~~K~~~l~~~~~~-~--~~~i--~iGDs~~Di~aa~~Ag~ 181 (219)
T PRK09552 143 NHCGCCKPSLIRKLSDT-N--DFHI--VIGDSITDLEAAKQADK 181 (219)
T ss_pred ccCCCchHHHHHHhccC-C--CCEE--EEeCCHHHHHHHHHCCc
Confidence 277777766532 1 2334 48999999999999998
No 36
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=96.83 E-value=0.0024 Score=64.46 Aligned_cols=49 Identities=16% Similarity=0.295 Sum_probs=39.8
Q ss_pred cEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHH
Q 001552 853 RIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYH 912 (1055)
Q Consensus 853 KIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~ 912 (1055)
|+|++|+||||+.++- . -++...+..++++++|++|+.+|+|+......
T Consensus 2 k~v~~DlDGTLl~~~~--~---------i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~ 50 (215)
T TIGR01487 2 KLVAIDIDGTLTEPNR--M---------ISERAIEAIRKAEKKGIPVSLVTGNTVPFARA 50 (215)
T ss_pred cEEEEecCCCcCCCCc--c---------cCHHHHHHHHHHHHCCCEEEEEcCCcchhHHH
Confidence 7899999999997542 1 24677888999999999999999998865443
No 37
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=96.75 E-value=0.0037 Score=61.49 Aligned_cols=52 Identities=23% Similarity=0.362 Sum_probs=41.0
Q ss_pred EEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHH
Q 001552 855 VISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFL 917 (1055)
Q Consensus 855 VISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL 917 (1055)
|++||||||..++- . -.+-..+.++.++++|++|+..|+|++..+..+...|
T Consensus 1 i~~DlDGTLl~~~~----------~-i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~ 52 (254)
T PF08282_consen 1 IFSDLDGTLLNSDG----------K-ISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKEL 52 (254)
T ss_dssp EEEECCTTTCSTTS----------S-SCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHT
T ss_pred cEEEECCceecCCC----------e-eCHHHHHHHHhhcccceEEEEEccCcccccccccccc
Confidence 78999999988542 1 2377888999999999999999999988655444433
No 38
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=96.74 E-value=0.0037 Score=69.00 Aligned_cols=111 Identities=15% Similarity=0.174 Sum_probs=68.4
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCC---ceecCCCCCCccchhhhhccCchHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDG---PVVISPDGLFPSLFREVIRRAPHEFKIA 958 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~G---PVLLSPd~Lf~AL~REVI~KkPeeFKIa 958 (1055)
.||+.++++.++++||++.-+|+-....++..++-| ++... .+-+....+...+..++... .-|-+
T Consensus 183 ~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~L--------gld~~~an~lei~dg~ltg~v~g~iv~~---k~K~~ 251 (322)
T PRK11133 183 MPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKL--------RLDAAVANELEIMDGKLTGNVLGDIVDA---QYKAD 251 (322)
T ss_pred ChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHc--------CCCeEEEeEEEEECCEEEeEecCccCCc---ccHHH
Confidence 689999999999999999999998876655444433 22210 01111111111111111111 34778
Q ss_pred HHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCCCcEEEECCCCcee
Q 001552 959 CLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPRGKIFIINPKGEVV 1008 (1055)
Q Consensus 959 cL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~sRIFiINpkGel~ 1008 (1055)
+|+.++..+.-.....+ +||+..+|+.+-+.+|+.. ..|++=.|+
T Consensus 252 ~L~~la~~lgi~~~qtI-aVGDg~NDl~m~~~AGlgi----A~nAkp~Vk 296 (322)
T PRK11133 252 TLTRLAQEYEIPLAQTV-AIGDGANDLPMIKAAGLGI----AYHAKPKVN 296 (322)
T ss_pred HHHHHHHHcCCChhhEE-EEECCHHHHHHHHHCCCeE----EeCCCHHHH
Confidence 88888776643222233 6999999999999999843 348887765
No 39
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=96.71 E-value=0.0036 Score=63.10 Aligned_cols=49 Identities=18% Similarity=0.321 Sum_probs=39.3
Q ss_pred cEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHH
Q 001552 853 RIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYH 912 (1055)
Q Consensus 853 KIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~ 912 (1055)
|+|++|+||||..++- .+ .+...+..++++++|.+|+.+|+|+...+..
T Consensus 4 kli~~DlDGTLl~~~~--~i---------~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~ 52 (230)
T PRK01158 4 KAIAIDIDGTITDKDR--RL---------SLKAVEAIRKAEKLGIPVILATGNVLCFARA 52 (230)
T ss_pred eEEEEecCCCcCCCCC--cc---------CHHHHHHHHHHHHCCCEEEEEcCCchHHHHH
Confidence 7899999999997542 11 2566778889999999999999999875543
No 40
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=96.69 E-value=0.0038 Score=64.76 Aligned_cols=80 Identities=20% Similarity=0.373 Sum_probs=55.8
Q ss_pred CcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCc
Q 001552 852 TRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGP 931 (1055)
Q Consensus 852 dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GP 931 (1055)
.|+|++||||||+.++-. -++-..+..++++++|++|+..|+|+...+......| ++ .||
T Consensus 3 ~kli~~DlDGTLl~~~~~-----------i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l--------~~-~~~ 62 (264)
T COG0561 3 IKLLAFDLDGTLLDSNKT-----------ISPETKEALARLREKGVKVVLATGRPLPDVLSILEEL--------GL-DGP 62 (264)
T ss_pred eeEEEEcCCCCccCCCCc-----------cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHc--------CC-Ccc
Confidence 488999999999997642 3577888888999999999999999995544444444 23 237
Q ss_pred eecCCCCCCccchhhhhccCc
Q 001552 932 VVISPDGLFPSLFREVIRRAP 952 (1055)
Q Consensus 932 VLLSPd~Lf~AL~REVI~KkP 952 (1055)
+++.-..+.... .|++..++
T Consensus 63 ~I~~NGa~i~~~-~~~i~~~~ 82 (264)
T COG0561 63 LITFNGALIYNG-GELLFQKP 82 (264)
T ss_pred EEEeCCeEEecC-CcEEeeec
Confidence 777665544333 44444433
No 41
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=96.66 E-value=0.006 Score=62.84 Aligned_cols=69 Identities=23% Similarity=0.430 Sum_probs=49.2
Q ss_pred CcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCc
Q 001552 852 TRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGP 931 (1055)
Q Consensus 852 dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GP 931 (1055)
-|++++||||||..++- ++ .+-..+..++++++|++|+..|+|+... ++.+++.+ ++ .+|
T Consensus 3 ~kli~~DlDGTLl~~~~--~i---------~~~~~~ai~~~~~~G~~~~iaTGR~~~~---~~~~~~~l-----~~-~~~ 62 (272)
T PRK10530 3 YRVIALDLDGTLLTPKK--TI---------LPESLEALARAREAGYKVIIVTGRHHVA---IHPFYQAL-----AL-DTP 62 (272)
T ss_pred ccEEEEeCCCceECCCC--cc---------CHHHHHHHHHHHHCCCEEEEEcCCChHH---HHHHHHhc-----CC-CCC
Confidence 37899999999997642 22 2455678889999999999999999764 45566422 23 357
Q ss_pred eecCCCCCC
Q 001552 932 VVISPDGLF 940 (1055)
Q Consensus 932 VLLSPd~Lf 940 (1055)
+++.-..+.
T Consensus 63 ~I~~NGa~i 71 (272)
T PRK10530 63 AICCNGTYL 71 (272)
T ss_pred EEEcCCcEE
Confidence 666654433
No 42
>PRK10444 UMP phosphatase; Provisional
Probab=96.65 E-value=0.0032 Score=66.73 Aligned_cols=68 Identities=24% Similarity=0.391 Sum_probs=52.1
Q ss_pred cEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCce
Q 001552 853 RIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPV 932 (1055)
Q Consensus 853 KIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPV 932 (1055)
|.|++|+||||..++. ..||+.++.+.++++|.+|++||.|+..-.....+-|. .-|..+++.-+
T Consensus 2 ~~v~~DlDGtL~~~~~------------~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~---~~G~~~~~~~i 66 (248)
T PRK10444 2 KNVICDIDGVLMHDNV------------AVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFA---TAGVDVPDSVF 66 (248)
T ss_pred cEEEEeCCCceEeCCe------------eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHH---HcCCCCCHhhE
Confidence 6799999999998642 25899999999999999999999999765555555553 33555566666
Q ss_pred ecC
Q 001552 933 VIS 935 (1055)
Q Consensus 933 LLS 935 (1055)
+++
T Consensus 67 ~ts 69 (248)
T PRK10444 67 YTS 69 (248)
T ss_pred ecH
Confidence 554
No 43
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=96.60 E-value=0.008 Score=70.72 Aligned_cols=127 Identities=17% Similarity=0.268 Sum_probs=75.6
Q ss_pred CCCcEEEEecCCcccccccccccccccCCCCC--hhhHHHHHHHHHHcCCeEEEEccchhh-----HHHHHHHHHHhccc
Q 001552 850 WNTRIVISDVDGTITKSDVLGQFMPLVGVDWS--QTGVAHLFSAIKENGYQLLFLSARAIV-----QAYHTRRFLFTLKQ 922 (1055)
Q Consensus 850 ~~dKIVISDIDGTITKSDvlGhIlP~LGkDWT--H~GVAkLYskI~~NGYkILYLSARpIg-----qAd~TR~yL~~i~Q 922 (1055)
...|++.||.||||.+... |..+|.--.||. .+||.++...|+++||+|+-+|.-+.- =....+.++..+-+
T Consensus 166 ~~~Kia~fD~DGTLi~t~s-g~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~ 244 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKS-GKVFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVA 244 (526)
T ss_pred ccCcEEEEECCCCccccCC-CccCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHH
Confidence 4569999999999997432 555555555774 899999999999999999999986441 01111222332221
Q ss_pred CCcCCCCCceecCCCCCCccchhhhhccCchHHHHHHHHHHHhhCC-----CCCCCEEEccCCCchhHHHHHhcC
Q 001552 923 DGKALPDGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKALFP-----SDCNPFYAGFGNRDTDEISYLKVG 992 (1055)
Q Consensus 923 ~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~LFP-----~~~nPFyAGFGNR~TDv~AYraVG 992 (1055)
..++|-= ++..++. ..-++|+.- +|..+...++ ....-|| .|++..|+.+=+.+|
T Consensus 245 -~lgipfd-viia~~~--------~~~RKP~pG---m~~~a~~~~~~~~~Id~~~S~~--VGDaagr~~~g~~ag 304 (526)
T TIGR01663 245 -KLGVPFQ-VFIAIGA--------GFYRKPLTG---MWDHLKEEANDGTEIQEDDCFF--VGDAAGRPANGKAAG 304 (526)
T ss_pred -HcCCceE-EEEeCCC--------CCCCCCCHH---HHHHHHHhcCcccCCCHHHeEE--eCCcccchHHHHhcC
Confidence 3456622 3334432 123456422 2333333332 1134566 888998887755555
No 44
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=96.57 E-value=0.0053 Score=61.95 Aligned_cols=66 Identities=21% Similarity=0.334 Sum_probs=46.3
Q ss_pred EEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCcee
Q 001552 854 IVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVV 933 (1055)
Q Consensus 854 IVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVL 933 (1055)
.|++|+||||+.++-. + ..+ ..+..++++++|++|+.+|+|+......+..-| +++..|++
T Consensus 1 ~i~~DlDGTLL~~~~~--~--------~~~-~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l--------~~~~~~~I 61 (221)
T TIGR02463 1 WVFSDLDGTLLDSHSY--D--------WQP-AAPWLTRLQEAGIPVILCTSKTAAEVEYLQKAL--------GLTGDPYI 61 (221)
T ss_pred CEEEeCCCCCcCCCCC--C--------cHH-HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc--------CCCCCcEE
Confidence 3799999999986531 1 123 568888899999999999999987655444444 24335666
Q ss_pred cCCCC
Q 001552 934 ISPDG 938 (1055)
Q Consensus 934 LSPd~ 938 (1055)
+.-..
T Consensus 62 ~~NGa 66 (221)
T TIGR02463 62 AENGA 66 (221)
T ss_pred EeCCc
Confidence 65544
No 45
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.56 E-value=0.0051 Score=63.62 Aligned_cols=109 Identities=13% Similarity=0.020 Sum_probs=63.7
Q ss_pred hhhHHHHHH-HHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCch---HHHH
Q 001552 882 QTGVAHLFS-AIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPH---EFKI 957 (1055)
Q Consensus 882 H~GVAkLYs-kI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPe---eFKI 957 (1055)
.|||.++.. .+++.|++++-+|+.+-.++...-..+..+ +.. -+|.+.-..- -...+. .+. +-|.
T Consensus 96 ~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~-----~~~--~~i~t~le~~--~gg~~~--g~~c~g~~Kv 164 (210)
T TIGR01545 96 FPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFI-----HRL--NLIASQIERG--NGGWVL--PLRCLGHEKV 164 (210)
T ss_pred CccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccc-----ccC--cEEEEEeEEe--CCceEc--CccCCChHHH
Confidence 566777774 566789999999999877766665443110 000 1221110000 001111 122 3455
Q ss_pred HHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCCCcEEEECCCCceee
Q 001552 958 ACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPRGKIFIINPKGEVVV 1009 (1055)
Q Consensus 958 acL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~sRIFiINpkGel~~ 1009 (1055)
..|+ ..+..+ ...+.+||+..+|..+...||-| |.|||+..|++
T Consensus 165 ~rl~---~~~~~~-~~~~~aYsDS~~D~pmL~~a~~~----~~Vnp~~~L~~ 208 (210)
T TIGR01545 165 AQLE---QKIGSP-LKLYSGYSDSKQDNPLLAFCEHR----WRVSKRGELQQ 208 (210)
T ss_pred HHHH---HHhCCC-hhheEEecCCcccHHHHHhCCCc----EEECcchHhcc
Confidence 5444 444322 23345899999999999999977 79999998863
No 46
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.55 E-value=0.012 Score=61.62 Aligned_cols=97 Identities=10% Similarity=0.040 Sum_probs=55.2
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCchHHHHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFKIACLE 961 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL~ 961 (1055)
.|||.++...++++||++.-+|+.+-... +..|+...- ..+..-.++.+. ... + -.+.|+.|..++ +
T Consensus 103 ~pg~~elL~~L~~~g~~l~I~T~~~~~~~---~~~l~~~~l--~~~~~d~i~~~~-~~~----~--~KP~p~~~~~a~-~ 169 (267)
T PRK13478 103 IPGVLEVIAALRARGIKIGSTTGYTREMM---DVVVPLAAA--QGYRPDHVVTTD-DVP----A--GRPYPWMALKNA-I 169 (267)
T ss_pred CCCHHHHHHHHHHCCCEEEEEcCCcHHHH---HHHHHHHhh--cCCCceEEEcCC-cCC----C--CCCChHHHHHHH-H
Confidence 67888888999999999999998766543 333332111 122212344432 211 0 123344554332 2
Q ss_pred HHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCC
Q 001552 962 DIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPR 995 (1055)
Q Consensus 962 dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~ 995 (1055)
.+ .+-|+ ...+| +|++.+|+.+=+++|++.
T Consensus 170 ~l-~~~~~-~e~l~--IGDs~~Di~aA~~aG~~~ 199 (267)
T PRK13478 170 EL-GVYDV-AACVK--VDDTVPGIEEGLNAGMWT 199 (267)
T ss_pred Hc-CCCCC-cceEE--EcCcHHHHHHHHHCCCEE
Confidence 11 11111 12344 899999999999999953
No 47
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.51 E-value=0.0077 Score=63.38 Aligned_cols=69 Identities=17% Similarity=0.338 Sum_probs=47.5
Q ss_pred CCcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCC
Q 001552 851 NTRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDG 930 (1055)
Q Consensus 851 ~dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~G 930 (1055)
..++|++||||||+.++- . ..+-..+..++++++|.+|+..|+|+.... +.+++.+ +++..
T Consensus 6 ~~~lI~~DlDGTLL~~~~---~--------i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i---~~~~~~l-----~~~~~ 66 (271)
T PRK03669 6 DPLLIFTDLDGTLLDSHT---Y--------DWQPAAPWLTRLREAQVPVILCSSKTAAEM---LPLQQTL-----GLQGL 66 (271)
T ss_pred CCeEEEEeCccCCcCCCC---c--------CcHHHHHHHHHHHHcCCeEEEEcCCCHHHH---HHHHHHh-----CCCCC
Confidence 568899999999997532 1 124455778899999999999999998654 4455322 24334
Q ss_pred ceecCCCC
Q 001552 931 PVVISPDG 938 (1055)
Q Consensus 931 PVLLSPd~ 938 (1055)
|++..-..
T Consensus 67 ~~I~~NGa 74 (271)
T PRK03669 67 PLIAENGA 74 (271)
T ss_pred cEEEeCCC
Confidence 66655443
No 48
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=96.49 E-value=0.0046 Score=65.39 Aligned_cols=56 Identities=14% Similarity=0.175 Sum_probs=43.6
Q ss_pred cEEEEecCCcccccccccccccccCCCC-ChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHH
Q 001552 853 RIVISDVDGTITKSDVLGQFMPLVGVDW-SQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFL 917 (1055)
Q Consensus 853 KIVISDIDGTITKSDvlGhIlP~LGkDW-TH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL 917 (1055)
|+|+||+||||...+- +.+ ..||+.+..+.++++|++++++|.|+..-.......|
T Consensus 2 k~i~~D~DGtl~~~~~---------~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l 58 (257)
T TIGR01458 2 KGVLLDISGVLYISDA---------KSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERL 58 (257)
T ss_pred CEEEEeCCCeEEeCCC---------cccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHH
Confidence 6899999999997542 112 3589999999999999999999998766544444444
No 49
>PRK08238 hypothetical protein; Validated
Probab=96.47 E-value=0.015 Score=67.66 Aligned_cols=129 Identities=22% Similarity=0.259 Sum_probs=85.8
Q ss_pred CCcEEEEecCCcccccccccc--------------ccc----------------ccCCCC----ChhhHHHHHHHHHHcC
Q 001552 851 NTRIVISDVDGTITKSDVLGQ--------------FMP----------------LVGVDW----SQTGVAHLFSAIKENG 896 (1055)
Q Consensus 851 ~dKIVISDIDGTITKSDvlGh--------------IlP----------------~LGkDW----TH~GVAkLYskI~~NG 896 (1055)
..+..|+|+|||++++|.+=. .+| .++-|- -++|+.++.+.++++|
T Consensus 9 ~~~pl~~DlDgTLi~td~l~e~~~~~l~~~p~~~~~l~~~~~~g~a~lK~~~a~~~~~d~~~lp~~pga~e~L~~lk~~G 88 (479)
T PRK08238 9 RDLPLVVDLDGTLIRTDLLHESIFALLRRNPLALLRLPLWLLRGKAALKRRLARRVDLDVATLPYNEEVLDYLRAERAAG 88 (479)
T ss_pred CCCCEEEeCCCCccccchHHHHHHHHHHhChHHHHHHHHHHHhcHHHHHHHHHhhcCCChhhCCCChhHHHHHHHHHHCC
Confidence 445799999999999997511 000 122222 2689999999999999
Q ss_pred CeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCchHHHHHHHHHHHhhCCCCCCCEEE
Q 001552 897 YQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKALFPSDCNPFYA 976 (1055)
Q Consensus 897 YkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~LFP~~~nPFyA 976 (1055)
+++.-+|+++...++...+.+ |. + -.++.+.+. ...+|+. |.+.+. +.++.+ .-.|
T Consensus 89 ~~v~LaTas~~~~a~~i~~~l------Gl-F--d~Vigsd~~---------~~~kg~~-K~~~l~---~~l~~~-~~~y- 144 (479)
T PRK08238 89 RKLVLATASDERLAQAVAAHL------GL-F--DGVFASDGT---------TNLKGAA-KAAALV---EAFGER-GFDY- 144 (479)
T ss_pred CEEEEEeCCCHHHHHHHHHHc------CC-C--CEEEeCCCc---------cccCCch-HHHHHH---HHhCcc-CeeE-
Confidence 999999999988777666655 21 1 123333221 1233333 555444 444432 2233
Q ss_pred ccCCCchhHHHHHhcCCCCCcEEEECCCCcee
Q 001552 977 GFGNRDTDEISYLKVGIPRGKIFIINPKGEVV 1008 (1055)
Q Consensus 977 GFGNR~TDv~AYraVGIP~sRIFiINpkGel~ 1008 (1055)
+||+.+|..+++.+| +-+.|||...+.
T Consensus 145 -vGDS~~Dlp~~~~A~----~av~Vn~~~~l~ 171 (479)
T PRK08238 145 -AGNSAADLPVWAAAR----RAIVVGASPGVA 171 (479)
T ss_pred -ecCCHHHHHHHHhCC----CeEEECCCHHHH
Confidence 599999999999999 557999997764
No 50
>PF15017 AF1Q: Drug resistance and apoptosis regulator
Probab=96.40 E-value=0.0015 Score=61.15 Aligned_cols=30 Identities=33% Similarity=0.707 Sum_probs=21.9
Q ss_pred cccCCCCCC-CCCcccccccccCCCCCCCCC
Q 001552 1026 HGMFPHTTS-TEQEDFNQWNYWKLPPPNIDV 1055 (1055)
Q Consensus 1026 D~~FPpl~~-~~~~efs~f~yWr~plp~id~ 1055 (1055)
+..+++... ....+|++|+|||.|||+||+
T Consensus 5 ~~~~~~~~~~~~~~~f~sF~fWR~PlP~id~ 35 (87)
T PF15017_consen 5 DWDKPPPQHDPEDEEFNSFLFWRNPLPDIDL 35 (87)
T ss_pred cccCCCccCCcccccccceeeccCCCCCCCH
Confidence 334554433 345789999999999999974
No 51
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=96.36 E-value=0.006 Score=61.14 Aligned_cols=49 Identities=16% Similarity=0.305 Sum_probs=38.1
Q ss_pred EEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHH
Q 001552 855 VISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTR 914 (1055)
Q Consensus 855 VISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR 914 (1055)
|+||+||||+.++- .+ .+-..+..++++++|++|+.+|+|+........
T Consensus 1 i~~DlDGTLl~~~~--~i---------~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~ 49 (225)
T TIGR01482 1 IASDIDGTLTDPNR--AI---------NESALEAIRKAESVGIPVVLVTGNSVQFARALA 49 (225)
T ss_pred CeEeccCccCCCCc--cc---------CHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHH
Confidence 58999999998652 11 255667788899999999999999987665433
No 52
>PTZ00174 phosphomannomutase; Provisional
Probab=96.35 E-value=0.0071 Score=63.20 Aligned_cols=53 Identities=21% Similarity=0.385 Sum_probs=41.8
Q ss_pred CCcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHH
Q 001552 851 NTRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFL 917 (1055)
Q Consensus 851 ~dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL 917 (1055)
.-|+|++|+||||..++- ++. +...+..++++++|++|+..|+|+... ++..|
T Consensus 4 ~~klia~DlDGTLL~~~~--~is---------~~~~~ai~~l~~~Gi~~viaTGR~~~~---i~~~l 56 (247)
T PTZ00174 4 KKTILLFDVDGTLTKPRN--PIT---------QEMKDTLAKLKSKGFKIGVVGGSDYPK---IKEQL 56 (247)
T ss_pred CCeEEEEECcCCCcCCCC--CCC---------HHHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHH
Confidence 358999999999998763 333 445678889999999999999998773 35555
No 53
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=96.33 E-value=0.0014 Score=63.42 Aligned_cols=93 Identities=15% Similarity=0.128 Sum_probs=55.1
Q ss_pred hhHH----HHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCc---cchhhhhccCchH-
Q 001552 883 TGVA----HLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFP---SLFREVIRRAPHE- 954 (1055)
Q Consensus 883 ~GVA----kLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~---AL~REVI~KkPee- 954 (1055)
+|+. ++++.++++|++++-+|+.+..++...-. ..++|.=.++.+.. .-. ..... + .+..
T Consensus 88 ~~~~~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~--------~~~i~~~~v~~~~~-~~~~~~~~~~~-~--~~~~~ 155 (192)
T PF12710_consen 88 PGFIPDAMELIRELKDNGIKVVIVSGSPDEIIEPIAE--------RLGIDDDNVIGNEL-FDNGGGIFTGR-I--TGSNC 155 (192)
T ss_dssp TTCHTTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHH--------HTTSSEGGEEEEEE-ECTTCCEEEEE-E--EEEEE
T ss_pred cCchhhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHH--------HcCCCceEEEEEee-eecccceeeee-E--CCCCC
Confidence 5555 99999999999999999987655544433 24566544544432 000 00000 0 1112
Q ss_pred -HHHHHHHHH---HhhCCCCCCCEEEccCCCchhHHHHH
Q 001552 955 -FKIACLEDI---KALFPSDCNPFYAGFGNRDTDEISYL 989 (1055)
Q Consensus 955 -FKIacL~dI---k~LFP~~~nPFyAGFGNR~TDv~AYr 989 (1055)
-|..+|+.+ ... +....++ .++|+..+|+.+-+
T Consensus 156 ~~K~~~l~~~~~~~~~-~~~~~~~-~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 156 GGKAEALKELYIRDEE-DIDPDRV-IAIGDSINDLPMLR 192 (192)
T ss_dssp SHHHHHHHHHHHHHHH-THTCCEE-EEEESSGGGHHHHH
T ss_pred CcHHHHHHHHHHHhhc-CCCCCeE-EEEECCHHHHHHhC
Confidence 389999888 221 2222334 48999999998753
No 54
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=96.32 E-value=0.0069 Score=56.34 Aligned_cols=52 Identities=19% Similarity=0.333 Sum_probs=39.4
Q ss_pred EEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHH
Q 001552 855 VISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLF 918 (1055)
Q Consensus 855 VISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~ 918 (1055)
|++|+||||...+- +-||++++.+.|+++|+++++||..+-.-.....+.|.
T Consensus 1 ~l~D~dGvl~~g~~------------~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~ 52 (101)
T PF13344_consen 1 FLFDLDGVLYNGNE------------PIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLK 52 (101)
T ss_dssp EEEESTTTSEETTE------------E-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHH
T ss_pred CEEeCccEeEeCCC------------cCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHH
Confidence 68999999997322 35999999999999999999999987665444444443
No 55
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.28 E-value=0.019 Score=59.06 Aligned_cols=92 Identities=22% Similarity=0.351 Sum_probs=53.1
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCC-CceecCCCCCCccchhhhhccCch--HHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPD-GPVVISPDGLFPSLFREVIRRAPH--EFKIA 958 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~-GPVLLSPd~Lf~AL~REVI~KkPe--eFKIa 958 (1055)
.||+.++...++++|+++..+|+.+...+ +..|. ..++.. =.++..-+ ++...||+ .|...
T Consensus 97 ~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~---~~~l~-----~~~l~~~f~~i~~~~--------~~~~~KP~p~~~~~~ 160 (229)
T PRK13226 97 FDGVEGMLQRLECAGCVWGIVTNKPEYLA---RLILP-----QLGWEQRCAVLIGGD--------TLAERKPHPLPLLVA 160 (229)
T ss_pred CCCHHHHHHHHHHCCCeEEEECCCCHHHH---HHHHH-----HcCchhcccEEEecC--------cCCCCCCCHHHHHHH
Confidence 67888888899999999999999876443 33342 122221 01122111 11123444 44433
Q ss_pred HHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCC
Q 001552 959 CLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPR 995 (1055)
Q Consensus 959 cL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~ 995 (1055)
+ +.+ .+ ++ ..-+| +|++.+|+.+-+++|+..
T Consensus 161 ~-~~l-~~-~p-~~~l~--IGDs~~Di~aA~~aG~~~ 191 (229)
T PRK13226 161 A-ERI-GV-AP-TDCVY--VGDDERDILAARAAGMPS 191 (229)
T ss_pred H-HHh-CC-Ch-hhEEE--eCCCHHHHHHHHHCCCcE
Confidence 2 221 12 12 23344 999999999999999964
No 56
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=96.25 E-value=0.028 Score=63.34 Aligned_cols=139 Identities=17% Similarity=0.232 Sum_probs=77.2
Q ss_pred CcEEEEecCCccccccccccccc-ccCCCCChhhHHHHHHHHHHcCCeEEEEccc-hhhHHH-------HHHHHHHhccc
Q 001552 852 TRIVISDVDGTITKSDVLGQFMP-LVGVDWSQTGVAHLFSAIKENGYQLLFLSAR-AIVQAY-------HTRRFLFTLKQ 922 (1055)
Q Consensus 852 dKIVISDIDGTITKSDvlGhIlP-~LGkDWTH~GVAkLYskI~~NGYkILYLSAR-pIgqAd-------~TR~yL~~i~Q 922 (1055)
.|++.+|.||||+..-. ++... .+.+--..|||.+++..++++||++.-+|.. .++... ..+.++..+-+
T Consensus 2 ~k~l~lDrDgtl~~~~~-~~y~~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~ 80 (354)
T PRK05446 2 QKILFIDRDGTLIEEPP-TDFQVDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFE 80 (354)
T ss_pred CcEEEEeCCCCccCCCC-ccccccCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHH
Confidence 58999999999998532 22222 2222234799999999999999999999984 111111 11222222211
Q ss_pred CCcCCCCCceecCCCCCCccchhhhhccCch--HHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCCCcEEE
Q 001552 923 DGKALPDGPVVISPDGLFPSLFREVIRRAPH--EFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPRGKIFI 1000 (1055)
Q Consensus 923 ~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPe--eFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~sRIFi 1000 (1055)
..+++---++++++..- .+...++|+ .|...+ +.+ . +.+ .+.+| +|++.+|+.+=+.+|+. .+.
T Consensus 81 -~~gl~fd~i~i~~~~~s----d~~~~rKP~p~~l~~a~-~~l-~-v~~-~~svm--IGDs~sDi~aAk~aGi~---~I~ 146 (354)
T PRK05446 81 -SQGIKFDEVLICPHFPE----DNCSCRKPKTGLVEEYL-AEG-A-IDL-ANSYV--IGDRETDVQLAENMGIK---GIR 146 (354)
T ss_pred -HcCCceeeEEEeCCcCc----ccCCCCCCCHHHHHHHH-HHc-C-CCc-ccEEE--EcCCHHHHHHHHHCCCe---EEE
Confidence 23454222333332110 011123454 443332 211 1 111 34666 78999999999999996 334
Q ss_pred ECCCC
Q 001552 1001 INPKG 1005 (1055)
Q Consensus 1001 INpkG 1005 (1055)
||+.+
T Consensus 147 v~~~~ 151 (354)
T PRK05446 147 YARET 151 (354)
T ss_pred EECCC
Confidence 56643
No 57
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.21 E-value=0.032 Score=57.78 Aligned_cols=97 Identities=11% Similarity=0.023 Sum_probs=54.9
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCchHHHHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFKIACLE 961 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL~ 961 (1055)
.|||.++...++++||++.-+|+.+..++...-+-+. - ..+..-.++.+ +... + -.+.|+.|..++ +
T Consensus 101 ~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~g---l--~~~f~d~ii~~-~~~~----~--~KP~p~~~~~a~-~ 167 (253)
T TIGR01422 101 IPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAA---L--QGYRPDYNVTT-DDVP----A--GRPAPWMALKNA-I 167 (253)
T ss_pred CCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHH---h--cCCCCceEEcc-ccCC----C--CCCCHHHHHHHH-H
Confidence 5688888889999999999999987654443332221 1 11211123332 2211 0 123444554332 2
Q ss_pred HHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCC
Q 001552 962 DIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPR 995 (1055)
Q Consensus 962 dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~ 995 (1055)
.+ .+-++ ...+| +|++.+|+.|=+++|+..
T Consensus 168 ~l-~~~~~-~~~l~--IGDs~~Di~aA~~aGi~~ 197 (253)
T TIGR01422 168 EL-GVYDV-AACVK--VGDTVPDIEEGRNAGMWT 197 (253)
T ss_pred Hc-CCCCc-hheEE--ECCcHHHHHHHHHCCCeE
Confidence 21 11111 12344 899999999999999964
No 58
>PLN02645 phosphoglycolate phosphatase
Probab=96.20 E-value=0.0094 Score=64.73 Aligned_cols=55 Identities=22% Similarity=0.346 Sum_probs=43.0
Q ss_pred CCcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHH
Q 001552 851 NTRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFL 917 (1055)
Q Consensus 851 ~dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL 917 (1055)
.-++|+|||||||...+ + .-+|+.++++.++++|++|+++|+|+........+-|
T Consensus 27 ~~~~~~~D~DGtl~~~~---~---------~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l 81 (311)
T PLN02645 27 SVETFIFDCDGVIWKGD---K---------LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKF 81 (311)
T ss_pred hCCEEEEeCcCCeEeCC---c---------cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHH
Confidence 34789999999998743 2 2489999999999999999999999855444433344
No 59
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.19 E-value=0.025 Score=56.09 Aligned_cols=100 Identities=23% Similarity=0.302 Sum_probs=58.8
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCc-CCCCCceecCCCCCCccchhhhhccCc--hHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGK-ALPDGPVVISPDGLFPSLFREVIRRAP--HEFKIA 958 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~-~LP~GPVLLSPd~Lf~AL~REVI~KkP--eeFKIa 958 (1055)
++|+..+...++++||++.-+|.-+... .+..|... |. .+-+ -++.+. ++-..|| +.|+..
T Consensus 94 ~~~~~~~L~~L~~~g~~~~i~Sn~~~~~---~~~~l~~~---gl~~~fd-~i~~s~---------~~~~~KP~~~~~~~~ 157 (198)
T TIGR01428 94 HPDVPAGLRALKERGYRLAILSNGSPAM---LKSLVKHA---GLDDPFD-AVLSAD---------AVRAYKPAPQVYQLA 157 (198)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHHH---HHHHHHHC---CChhhhh-eeEehh---------hcCCCCCCHHHHHHH
Confidence 6899999999999999999999876543 33444311 11 1111 133322 1222344 456555
Q ss_pred HHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCCCcEEEECCCCc
Q 001552 959 CLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPRGKIFIINPKGE 1006 (1055)
Q Consensus 959 cL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~sRIFiINpkGe 1006 (1055)
+ +.+ .+=|. .-++ +|++.+|+.+-+++|+.. ..|+..|+
T Consensus 158 ~-~~~-~~~p~--~~~~--vgD~~~Di~~A~~~G~~~---i~v~r~~~ 196 (198)
T TIGR01428 158 L-EAL-GVPPD--EVLF--VASNPWDLGGAKKFGFKT---AWVNRPGE 196 (198)
T ss_pred H-HHh-CCChh--hEEE--EeCCHHHHHHHHHCCCcE---EEecCCCC
Confidence 4 111 22122 2344 889999999999999974 34566554
No 60
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=96.18 E-value=0.03 Score=55.95 Aligned_cols=95 Identities=22% Similarity=0.261 Sum_probs=53.8
Q ss_pred ChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCC-CceecCCCCCCccchhhhhccCchHHHHHH
Q 001552 881 SQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPD-GPVVISPDGLFPSLFREVIRRAPHEFKIAC 959 (1055)
Q Consensus 881 TH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~-GPVLLSPd~Lf~AL~REVI~KkPeeFKIac 959 (1055)
..+|+.++...+++.||++..+|+...... +.+|.. .+|.. -..+++.+.. ....++|+.|+..
T Consensus 94 ~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~---~~~l~~-----~~l~~~f~~~~~~~~~------~~~kp~~~~~~~~- 158 (226)
T PRK13222 94 LYPGVKETLAALKAAGYPLAVVTNKPTPFV---APLLEA-----LGIADYFSVVIGGDSL------PNKKPDPAPLLLA- 158 (226)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCCHHHH---HHHHHH-----cCCccCccEEEcCCCC------CCCCcChHHHHHH-
Confidence 468888888999999999999999875433 344431 22221 0111211110 0112233444433
Q ss_pred HHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCC
Q 001552 960 LEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPR 995 (1055)
Q Consensus 960 L~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~ 995 (1055)
...+.......+ .+|++.+|+.+=+++|++.
T Consensus 159 ----~~~~~~~~~~~i-~igD~~~Di~~a~~~g~~~ 189 (226)
T PRK13222 159 ----CEKLGLDPEEML-FVGDSRNDIQAARAAGCPS 189 (226)
T ss_pred ----HHHcCCChhheE-EECCCHHHHHHHHHCCCcE
Confidence 222222112233 4999999999999999964
No 61
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.10 E-value=0.036 Score=55.28 Aligned_cols=108 Identities=20% Similarity=0.214 Sum_probs=68.3
Q ss_pred CCCcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCC
Q 001552 850 WNTRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPD 929 (1055)
Q Consensus 850 ~~dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~ 929 (1055)
.+-++|++|+|||++..+. .-.++|+.++...++++|+++.-+|..+. ...++.+++ ..++.
T Consensus 23 ~~v~~vv~D~Dgtl~~~~~----------~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~--~~~~~~~~~-----~~gl~- 84 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPDH----------NEAYPALRDWIEELKAAGRKLLIVSNNAG--EQRAKAVEK-----ALGIP- 84 (170)
T ss_pred CCCCEEEEecCCccccCCC----------CCcChhHHHHHHHHHHcCCEEEEEeCCch--HHHHHHHHH-----HcCCE-
Confidence 5678999999999996432 12368999999999999999999999872 123333442 12222
Q ss_pred CceecCCCCCCccchhhhhccCchHHHHHHHHHHHhhCCCCCCCEEEccCCCc-hhHHHHHhcCCC
Q 001552 930 GPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRD-TDEISYLKVGIP 994 (1055)
Q Consensus 930 GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGNR~-TDv~AYraVGIP 994 (1055)
.+ + . ...+.|+.|+..+ +.+ .+ ++ ..-+ -+|++. +|+.+=+++|+.
T Consensus 85 --~~------~---~--~~KP~p~~~~~~l-~~~-~~-~~-~~~l--~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 85 --VL------P---H--AVKPPGCAFRRAH-PEM-GL-TS-EQVA--VVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred --EE------c---C--CCCCChHHHHHHH-HHc-CC-CH-HHEE--EECCcchHHHHHHHHcCCe
Confidence 11 0 0 1133455555433 211 11 11 1234 489998 899999999995
No 62
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=96.10 E-value=0.019 Score=58.58 Aligned_cols=96 Identities=13% Similarity=0.150 Sum_probs=57.4
Q ss_pred ChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCc--hH----
Q 001552 881 SQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAP--HE---- 954 (1055)
Q Consensus 881 TH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkP--ee---- 954 (1055)
..||+.++...++++|+++.-+|+..- ..++.+|..+ .+.-+++.++-. +. ...+...+| +.
T Consensus 71 l~pg~~e~l~~l~~~g~~~~IvS~~~~---~~i~~il~~~------~~~~~i~~n~~~-~~--~~~~~~~~p~~~~~~~~ 138 (214)
T TIGR03333 71 IREGFREFVAFINEHGIPFYVISGGMD---FFVYPLLEGI------VEKDRIYCNEAD-FS--NEYIHIDWPHPCDGTCQ 138 (214)
T ss_pred ccccHHHHHHHHHHCCCeEEEECCCcH---HHHHHHHHhh------CCcccEEeceeE-ee--CCeeEEeCCCCCccccc
Confidence 458888999999999999999999844 3444444311 111233322211 10 001111223 33
Q ss_pred -----HHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCC
Q 001552 955 -----FKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGI 993 (1055)
Q Consensus 955 -----FKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGI 993 (1055)
.|..+++.+... + ...+ .+|+..+|+.+=+.+|+
T Consensus 139 ~~cg~~K~~~l~~~~~~-~--~~~i--~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 139 NQCGCCKPSLIRKLSEP-N--DYHI--VIGDSVTDVEAAKQSDL 177 (214)
T ss_pred cCCCCCHHHHHHHHhhc-C--CcEE--EEeCCHHHHHHHHhCCe
Confidence 388888887752 1 2233 58999999999888876
No 63
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.05 E-value=0.039 Score=61.39 Aligned_cols=54 Identities=24% Similarity=0.396 Sum_probs=42.4
Q ss_pred cEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHH
Q 001552 853 RIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFL 917 (1055)
Q Consensus 853 KIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL 917 (1055)
|+|++|+||||..++- +.| +-+....++++++|.+|+..|+|+..-....+.-|
T Consensus 2 KLIftDLDGTLLd~~~---------~~~--~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~L 55 (302)
T PRK12702 2 RLVLSSLDGSLLDLEF---------NSY--GAARQALAALERRSIPLVLYSLRTRAQLEHLCRQL 55 (302)
T ss_pred cEEEEeCCCCCcCCCC---------cCC--HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHh
Confidence 7899999999998653 122 44678889999999999999999887655555544
No 64
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=96.03 E-value=0.013 Score=60.90 Aligned_cols=64 Identities=14% Similarity=0.268 Sum_probs=44.4
Q ss_pred EEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCcee
Q 001552 854 IVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVV 933 (1055)
Q Consensus 854 IVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVL 933 (1055)
+|++|+||||+.++- +. . +...+..++++++|++|+.+|+|+...+ +.+++ ..+++ .|++
T Consensus 1 li~~DlDGTll~~~~---------~~-~-~~~~~~i~~l~~~g~~~~~~TgR~~~~~---~~~~~-----~~~~~-~~~I 60 (256)
T TIGR01486 1 WIFTDLDGTLLDPHG---------YD-W-GPAKEVLERLQELGIPVIPCTSKTAAEV---EYLRK-----ELGLE-DPFI 60 (256)
T ss_pred CEEEcCCCCCcCCCC---------cC-c-hHHHHHHHHHHHCCCeEEEEcCCCHHHH---HHHHH-----HcCCC-CcEE
Confidence 478999999998652 01 1 2467888899999999999999998753 44553 23344 4555
Q ss_pred cCCC
Q 001552 934 ISPD 937 (1055)
Q Consensus 934 LSPd 937 (1055)
+.-.
T Consensus 61 ~~NG 64 (256)
T TIGR01486 61 VENG 64 (256)
T ss_pred EcCC
Confidence 5443
No 65
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.01 E-value=0.013 Score=61.70 Aligned_cols=50 Identities=20% Similarity=0.345 Sum_probs=40.6
Q ss_pred CcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHH
Q 001552 852 TRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYH 912 (1055)
Q Consensus 852 dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~ 912 (1055)
-|+|++||||||+.++- -..+++.+..++++++|++|+-+|+|+......
T Consensus 4 ~kli~~DlDGTLl~~~~-----------~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~ 53 (273)
T PRK00192 4 KLLVFTDLDGTLLDHHT-----------YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEV 53 (273)
T ss_pred ceEEEEcCcccCcCCCC-----------cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHH
Confidence 47899999999998542 123678889999999999999999998865443
No 66
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=95.91 E-value=0.0094 Score=59.63 Aligned_cols=52 Identities=27% Similarity=0.609 Sum_probs=38.7
Q ss_pred cEEEEecCCcccccccccccccccCCCC--ChhhHHHHHHHHHHcCCeEEEEccc
Q 001552 853 RIVISDVDGTITKSDVLGQFMPLVGVDW--SQTGVAHLFSAIKENGYQLLFLSAR 905 (1055)
Q Consensus 853 KIVISDIDGTITKSDvlGhIlP~LGkDW--TH~GVAkLYskI~~NGYkILYLSAR 905 (1055)
||..+|.||||.+... |...+.=-.|| -+++|.+..+.++++||+|+-+|--
T Consensus 1 Kia~fD~DgTLi~~~s-~~~f~~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ 54 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKS-GKKFPKDPDDWKFFPPGVPEALRELHKKGYKIVIVTNQ 54 (159)
T ss_dssp SEEEE-SCTTTEE-ST-STTS-SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEEE-
T ss_pred CEEEEeCCCCccCCCC-CCcCcCCHHHhhhcchhHHHHHHHHHhcCCeEEEEeCc
Confidence 7899999999988654 44444445576 4789999999999999999999953
No 67
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=95.90 E-value=0.016 Score=55.38 Aligned_cols=59 Identities=19% Similarity=0.352 Sum_probs=42.5
Q ss_pred cEEEEecCCccccccccc-ccccccCCCCChhhHHHHHHHHHHcCCeEEEEccc-hhhHHH
Q 001552 853 RIVISDVDGTITKSDVLG-QFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSAR-AIVQAY 911 (1055)
Q Consensus 853 KIVISDIDGTITKSDvlG-hIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSAR-pIgqAd 911 (1055)
|++++|+||||+-....- +-.+.+..+-..+|+.++.+.++++||++.-+|++ +...+.
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~ 61 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKNGFLLALASYNDDPHVAY 61 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHH
Confidence 689999999999653100 11122333346799999999999999999999998 554443
No 68
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=95.90 E-value=0.015 Score=60.23 Aligned_cols=51 Identities=18% Similarity=0.419 Sum_probs=39.9
Q ss_pred EEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHH
Q 001552 854 IVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLF 918 (1055)
Q Consensus 854 IVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~ 918 (1055)
+|++||||||+.++- . -.+...+.+++++++|++|+.+|+|+... ++.++.
T Consensus 1 li~~DlDGTLl~~~~--~---------i~~~~~~~i~~l~~~G~~~~iaTGR~~~~---~~~~~~ 51 (256)
T TIGR00099 1 LIFIDLDGTLLNDDH--T---------ISPSTKEALAKLREKGIKVVLATGRPYKE---VKNILK 51 (256)
T ss_pred CEEEeCCCCCCCCCC--c---------cCHHHHHHHHHHHHCCCeEEEEeCCCHHH---HHHHHH
Confidence 478999999997531 1 23678889999999999999999999653 455554
No 69
>PRK06769 hypothetical protein; Validated
Probab=95.85 E-value=0.033 Score=55.71 Aligned_cols=124 Identities=16% Similarity=0.122 Sum_probs=70.5
Q ss_pred CcEEEEecCCcccccccccccccccC-CCC-ChhhHHHHHHHHHHcCCeEEEEccchhhHHH--HHHHHHHhcccCCcCC
Q 001552 852 TRIVISDVDGTITKSDVLGQFMPLVG-VDW-SQTGVAHLFSAIKENGYQLLFLSARAIVQAY--HTRRFLFTLKQDGKAL 927 (1055)
Q Consensus 852 dKIVISDIDGTITKSDvlGhIlP~LG-kDW-TH~GVAkLYskI~~NGYkILYLSARpIgqAd--~TR~yL~~i~Q~g~~L 927 (1055)
-|++++|.||||-. |.. ... .++ ..|||.+++..++++||++..+|..+-.++. ..+.++..+. ..+|
T Consensus 4 ~~~~~~d~d~~~~~-----~~~-~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~--~~g~ 75 (173)
T PRK06769 4 IQAIFIDRDGTIGG-----DTT-IHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELK--GFGF 75 (173)
T ss_pred CcEEEEeCCCcccC-----CCC-CCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHH--hCCc
Confidence 47899999999943 322 111 122 3699999999999999999999987532110 0112222111 2334
Q ss_pred CCCceecCCCCCCccchhhh--hccCchHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCC
Q 001552 928 PDGPVVISPDGLFPSLFREV--IRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPR 995 (1055)
Q Consensus 928 P~GPVLLSPd~Lf~AL~REV--I~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~ 995 (1055)
. .++.+.... ..++ -.++|+.|+..+- .+ .+ .+ ...+| +|++.+|+.+-+++|+..
T Consensus 76 ~--~~~~~~~~~----~~~~~~~KP~p~~~~~~~~-~l-~~-~p-~~~i~--IGD~~~Di~aA~~aGi~~ 133 (173)
T PRK06769 76 D--DIYLCPHKH----GDGCECRKPSTGMLLQAAE-KH-GL-DL-TQCAV--IGDRWTDIVAAAKVNATT 133 (173)
T ss_pred C--EEEECcCCC----CCCCCCCCCCHHHHHHHHH-Hc-CC-CH-HHeEE--EcCCHHHHHHHHHCCCeE
Confidence 3 223322100 0111 1334556765542 22 22 11 23555 889999999999999953
No 70
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=95.84 E-value=0.034 Score=52.79 Aligned_cols=87 Identities=21% Similarity=0.164 Sum_probs=54.2
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCc--hHHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAP--HEFKIAC 959 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkP--eeFKIac 959 (1055)
-+|+.+++..|+++||++.-+|++....+......+ +. . +.. .++++.+ + ..+| +.|...+
T Consensus 66 ~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~--l~---~-~f~-~i~~~~~---------~-~~Kp~~~~~~~~~ 128 (154)
T TIGR01549 66 IRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH--LG---D-YFD-LILGSDE---------F-GAKPEPEIFLAAL 128 (154)
T ss_pred ccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH--HH---h-cCc-EEEecCC---------C-CCCcCHHHHHHHH
Confidence 389999999999999999999999877766554442 21 1 111 2344332 1 1344 4444443
Q ss_pred HHHHHhhCCCCCCCEEEccCCCchhHHHHHhcC
Q 001552 960 LEDIKALFPSDCNPFYAGFGNRDTDEISYLKVG 992 (1055)
Q Consensus 960 L~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVG 992 (1055)
..+.-....+| +|++..|+.+=+++|
T Consensus 129 -----~~~~~~~~~l~--iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 129 -----ESLGLPPEVLH--VGDNLNDIEGARNAG 154 (154)
T ss_pred -----HHcCCCCCEEE--EeCCHHHHHHHHHcc
Confidence 22221112344 899999999988876
No 71
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=95.80 E-value=0.03 Score=59.80 Aligned_cols=94 Identities=16% Similarity=0.192 Sum_probs=55.1
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCchHHHHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFKIACLE 961 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL~ 961 (1055)
.+|+.++...+++.||++.-+|+.+...+...-..+. + ..+-+. ++.+.+. . ...+.|+.|..++ +
T Consensus 111 ~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~g-l----~~~Fd~-ii~~~d~-~------~~KP~Pe~~~~a~-~ 176 (260)
T PLN03243 111 RPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVG-M----EGFFSV-VLAAEDV-Y------RGKPDPEMFMYAA-E 176 (260)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcC-C----HhhCcE-EEecccC-C------CCCCCHHHHHHHH-H
Confidence 5777888888999999999999987654444433331 1 111121 2222211 1 0133445666544 2
Q ss_pred HHHhhCCCCCCCEEEccCCCchhHHHHHhcCCC
Q 001552 962 DIKALFPSDCNPFYAGFGNRDTDEISYLKVGIP 994 (1055)
Q Consensus 962 dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP 994 (1055)
.+ .+-|. .-+ .+|++.+|+.|=+++|+.
T Consensus 177 ~l-~~~p~--~~l--~IgDs~~Di~aA~~aG~~ 204 (260)
T PLN03243 177 RL-GFIPE--RCI--VFGNSNSSVEAAHDGCMK 204 (260)
T ss_pred Hh-CCChH--HeE--EEcCCHHHHHHHHHcCCE
Confidence 21 22221 234 499999999999999996
No 72
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=95.76 E-value=0.019 Score=60.47 Aligned_cols=54 Identities=15% Similarity=0.239 Sum_probs=40.0
Q ss_pred cEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHH
Q 001552 853 RIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLF 918 (1055)
Q Consensus 853 KIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~ 918 (1055)
+.|++||||||...+- ..+|+.++.++++++|.+|+++|..+.-........|.
T Consensus 2 ~~~~~D~DGtl~~~~~------------~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~ 55 (249)
T TIGR01457 2 KGYLIDLDGTMYKGKE------------RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLA 55 (249)
T ss_pred CEEEEeCCCceEcCCe------------eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHH
Confidence 6899999999998532 23688999999999999999999633222233455554
No 73
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=95.66 E-value=0.021 Score=59.48 Aligned_cols=45 Identities=18% Similarity=0.474 Sum_probs=37.0
Q ss_pred EEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHH
Q 001552 854 IVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQA 910 (1055)
Q Consensus 854 IVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqA 910 (1055)
+|++|+||||..++- .-+...+..++++++|.+|+.+|+|+...+
T Consensus 1 li~~DlDGTLl~~~~------------~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~ 45 (225)
T TIGR02461 1 VIFTDLDGTLLPPGY------------EPGPAREALEELKDLGFPIVFVSSKTRAEQ 45 (225)
T ss_pred CEEEeCCCCCcCCCC------------CchHHHHHHHHHHHCCCEEEEEeCCCHHHH
Confidence 489999999997321 225688999999999999999999987753
No 74
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=95.64 E-value=0.022 Score=60.65 Aligned_cols=44 Identities=20% Similarity=0.321 Sum_probs=37.3
Q ss_pred cEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhh
Q 001552 853 RIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIV 908 (1055)
Q Consensus 853 KIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIg 908 (1055)
++|+|||||||..++- +-+|+.++++.++++|+++.++|+|+..
T Consensus 3 ~~~~~D~DGtl~~~~~------------~~~ga~e~l~~L~~~g~~~~~~Tnns~~ 46 (279)
T TIGR01452 3 QGFIFDCDGVLWLGER------------VVPGAPELLDRLARAGKAALFVTNNSTK 46 (279)
T ss_pred cEEEEeCCCceEcCCe------------eCcCHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 6899999999987421 3478999999999999999999998643
No 75
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=95.63 E-value=0.052 Score=53.97 Aligned_cols=89 Identities=22% Similarity=0.162 Sum_probs=49.6
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCC--CCceecCCCCCCccchhhhhccCch--HHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALP--DGPVVISPDGLFPSLFREVIRRAPH--EFKI 957 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP--~GPVLLSPd~Lf~AL~REVI~KkPe--eFKI 957 (1055)
.||+.++.+.++++||++.-+|+.+.. .+..|.. .+|. --.++.+. ++...||+ .|..
T Consensus 107 ~~g~~~~l~~L~~~g~~~~i~Sn~~~~----~~~~l~~-----~~l~~~fd~i~~s~---------~~~~~KP~~~~~~~ 168 (203)
T TIGR02252 107 YPDAIKLLKDLRERGLILGVISNFDSR----LRGLLEA-----LGLLEYFDFVVTSY---------EVGAEKPDPKIFQE 168 (203)
T ss_pred CcCHHHHHHHHHHCCCEEEEEeCCchh----HHHHHHH-----CCcHHhcceEEeec---------ccCCCCCCHHHHHH
Confidence 578888888888999999989886532 2344431 1221 01233322 11223444 4544
Q ss_pred HHHHHHHhhCCCCCCCEEEccCCCc-hhHHHHHhcCCC
Q 001552 958 ACLEDIKALFPSDCNPFYAGFGNRD-TDEISYLKVGIP 994 (1055)
Q Consensus 958 acL~dIk~LFP~~~nPFyAGFGNR~-TDv~AYraVGIP 994 (1055)
.+ +.+ .+ .+ ...+ -+|++. +|+.+-+++|+.
T Consensus 169 ~~-~~~-~~-~~-~~~~--~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 169 AL-ERA-GI-SP-EEAL--HIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HH-HHc-CC-Ch-hHEE--EECCCchHHHHHHHHcCCe
Confidence 33 221 11 11 1233 388886 899999999975
No 76
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=95.56 E-value=0.026 Score=56.31 Aligned_cols=48 Identities=15% Similarity=0.364 Sum_probs=38.5
Q ss_pred EEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHH
Q 001552 854 IVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAY 911 (1055)
Q Consensus 854 IVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd 911 (1055)
+|++|+||||+.++. + -..+.+.+...+++++|.+|+.+|+|+.....
T Consensus 1 li~~D~DgTL~~~~~-~---------~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~ 48 (204)
T TIGR01484 1 LLFFDLDGTLLDPNA-H---------ELSPETIEALERLREAGVKVVLVTGRSLAEIK 48 (204)
T ss_pred CEEEeCcCCCcCCCC-C---------cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHH
Confidence 489999999998542 1 12478889999999999999999999986444
No 77
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=95.51 E-value=0.026 Score=55.03 Aligned_cols=123 Identities=15% Similarity=0.049 Sum_probs=71.7
Q ss_pred CcEEEEecCCccccccc---ccccccccCC------------CCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHH
Q 001552 852 TRIVISDVDGTITKSDV---LGQFMPLVGV------------DWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRF 916 (1055)
Q Consensus 852 dKIVISDIDGTITKSDv---lGhIlP~LGk------------DWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~y 916 (1055)
.+.+|.|+||||-.+-. .+-..+.... -+..||+.++...++ +||++.-.|+.+-..+...-..
T Consensus 2 k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~ 80 (148)
T smart00577 2 KKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDL 80 (148)
T ss_pred CcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHH
Confidence 46799999999998631 2211111111 134799999999998 6799999999877766654433
Q ss_pred HHhcccCCcCCCCCceecCCCCCCccchhhhhccCchHHHHHHHHHHHhh-CCCCCCCEEEccCCCchhHHHHHhcCCCC
Q 001552 917 LFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKAL-FPSDCNPFYAGFGNRDTDEISYLKVGIPR 995 (1055)
Q Consensus 917 L~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~L-FP~~~nPFyAGFGNR~TDv~AYraVGIP~ 995 (1055)
|. +. ..+ ...++... ++...+|+ +++.+..+ .++ .+-+ .+|++..|+.+-.+.||+.
T Consensus 81 l~-~~---~~~-f~~i~~~~---------d~~~~KP~-----~~k~l~~l~~~p-~~~i--~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 81 LD-PK---KYF-GYRRLFRD---------ECVFVKGK-----YVKDLSLLGRDL-SNVI--IIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred hC-cC---CCE-eeeEEECc---------cccccCCe-----EeecHHHcCCCh-hcEE--EEECCHHHhhcCccCEEEe
Confidence 31 00 001 01122221 22234565 33333322 112 2344 4999999999998889876
Q ss_pred Cc
Q 001552 996 GK 997 (1055)
Q Consensus 996 sR 997 (1055)
..
T Consensus 139 ~~ 140 (148)
T smart00577 139 KP 140 (148)
T ss_pred cC
Confidence 54
No 78
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.49 E-value=0.059 Score=58.12 Aligned_cols=94 Identities=16% Similarity=0.217 Sum_probs=53.0
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCC-ceecCCCCCCccchhhhhccCch--HHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDG-PVVISPDGLFPSLFREVIRRAPH--EFKIA 958 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~G-PVLLSPd~Lf~AL~REVI~KkPe--eFKIa 958 (1055)
.|||.++...++++||++.-+|+.+..........+. +..+..+ .++ ..+ ++...+|+ .|..+
T Consensus 146 ~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~-----~~~~~~~~~~v-~~~--------~~~~~KP~p~~~~~a 211 (286)
T PLN02779 146 RPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLL-----GPERAQGLDVF-AGD--------DVPKKKPDPDIYNLA 211 (286)
T ss_pred hhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhc-----cccccCceEEE-ecc--------ccCCCCCCHHHHHHH
Confidence 5688888888999999999999975544433222220 1112221 122 111 12233554 55544
Q ss_pred HHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCC
Q 001552 959 CLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPR 995 (1055)
Q Consensus 959 cL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~ 995 (1055)
+ +.+ .+ .+ ...+ .+|++.+|+.|=+++|++.
T Consensus 212 ~-~~~-~~-~p-~~~l--~IGDs~~Di~aA~~aG~~~ 242 (286)
T PLN02779 212 A-ETL-GV-DP-SRCV--VVEDSVIGLQAAKAAGMRC 242 (286)
T ss_pred H-HHh-Cc-Ch-HHEE--EEeCCHHhHHHHHHcCCEE
Confidence 3 211 11 11 1233 4899999999999999863
No 79
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=95.41 E-value=0.032 Score=56.75 Aligned_cols=109 Identities=16% Similarity=0.269 Sum_probs=62.4
Q ss_pred CcEEEEecCCcccccccccccccccCCCCC----hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCC
Q 001552 852 TRIVISDVDGTITKSDVLGQFMPLVGVDWS----QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKAL 927 (1055)
Q Consensus 852 dKIVISDIDGTITKSDvlGhIlP~LGkDWT----H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~L 927 (1055)
-|++||||||++|.--+. ...-|.-+. +.|.+ ...+++.||++..+|+.+-..+...-+.| ++
T Consensus 7 i~~~v~d~dGv~tdg~~~---~~~~g~~~~~~~~~D~~~--~~~L~~~Gi~laIiT~k~~~~~~~~l~~l--------gi 73 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRIV---INDEGIESRNFDIKDGMG--VIVLQLCGIDVAIITSKKSGAVRHRAEEL--------KI 73 (169)
T ss_pred CeEEEEeCceeeECCeEE---EcCCCcEEEEEecchHHH--HHHHHHCCCEEEEEECCCcHHHHHHHHHC--------CC
Confidence 689999999999973221 112232221 22322 34667899999999999766554444433 23
Q ss_pred CCCceecCCCCCCccchhhhhccCchHHHHHHHHHHHhhCCCC-CCCEEEccCCCchhHHHHHhcCCC
Q 001552 928 PDGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKALFPSD-CNPFYAGFGNRDTDEISYLKVGIP 994 (1055)
Q Consensus 928 P~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~LFP~~-~nPFyAGFGNR~TDv~AYraVGIP 994 (1055)
. .+|.. +.++|+.|+.. ...+.-. .+.+ .||+..+|+.+-+.+|+.
T Consensus 74 ~---------~~f~~-----~kpkp~~~~~~-----~~~l~~~~~ev~--~iGD~~nDi~~~~~ag~~ 120 (169)
T TIGR02726 74 K---------RFHEG-----IKKKTEPYAQM-----LEEMNISDAEVC--YVGDDLVDLSMMKRVGLA 120 (169)
T ss_pred c---------EEEec-----CCCCHHHHHHH-----HHHcCcCHHHEE--EECCCHHHHHHHHHCCCe
Confidence 3 11111 12345444333 2222111 1233 599999999999999964
No 80
>PHA02597 30.2 hypothetical protein; Provisional
Probab=95.38 E-value=0.037 Score=55.04 Aligned_cols=92 Identities=13% Similarity=0.109 Sum_probs=47.2
Q ss_pred ChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccc-hhhhhccCchHHHHHH
Q 001552 881 SQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSL-FREVIRRAPHEFKIAC 959 (1055)
Q Consensus 881 TH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL-~REVI~KkPeeFKIac 959 (1055)
..||+.++.++++++ |+++.+|+.+-.........+. +. ..+| + .|... ..+...++|+.|+.++
T Consensus 75 ~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~~-l~---~~f~-~--------~f~~i~~~~~~~~kp~~~~~a~ 140 (197)
T PHA02597 75 AYDDALDVINKLKED-YDFVAVTALGDSIDALLNRQFN-LN---ALFP-G--------AFSEVLMCGHDESKEKLFIKAK 140 (197)
T ss_pred CCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhCC-HH---HhCC-C--------cccEEEEeccCcccHHHHHHHH
Confidence 367888888888886 6777788754332221111110 00 1111 1 11000 0111123455444433
Q ss_pred HHHHHhhCCCCCCCEEEccCCCchhHHHHHhc--CCC
Q 001552 960 LEDIKALFPSDCNPFYAGFGNRDTDEISYLKV--GIP 994 (1055)
Q Consensus 960 L~dIk~LFP~~~nPFyAGFGNR~TDv~AYraV--GIP 994 (1055)
..+.+ ...+ -+|++.+|+.|=+++ ||+
T Consensus 141 -----~~~~~-~~~v--~vgDs~~di~aA~~a~~Gi~ 169 (197)
T PHA02597 141 -----EKYGD-RVVC--FVDDLAHNLDAAHEALSQLP 169 (197)
T ss_pred -----HHhCC-CcEE--EeCCCHHHHHHHHHHHcCCc
Confidence 33321 1122 499999999999998 998
No 81
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=95.34 E-value=0.095 Score=54.33 Aligned_cols=105 Identities=11% Similarity=0.073 Sum_probs=59.2
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCc--hHHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAP--HEFKIAC 959 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkP--eeFKIac 959 (1055)
.+|+.++...++++||++.-+|+-+...+......+. + ..+-+ -++.+. ++...|| +.|..++
T Consensus 95 ~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~-l----~~~fd-~iv~s~---------~~~~~KP~p~~~~~~~ 159 (224)
T PRK14988 95 REDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTG-L----DAHLD-LLLSTH---------TFGYPKEDQRLWQAVA 159 (224)
T ss_pred CCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCC-c----HHHCC-EEEEee---------eCCCCCCCHHHHHHHH
Confidence 5899999999999999999999855433333222220 1 01112 122222 1122344 5565544
Q ss_pred HHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCCCcEEEECCCCcee
Q 001552 960 LEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPRGKIFIINPKGEVV 1008 (1055)
Q Consensus 960 L~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~sRIFiINpkGel~ 1008 (1055)
=+ ..+ ++ ..-+ .+|++..|+.+=+++|+.. -|.+-++.+...
T Consensus 160 ~~--~~~-~p-~~~l--~igDs~~di~aA~~aG~~~-~~~v~~~~~~~~ 201 (224)
T PRK14988 160 EH--TGL-KA-ERTL--FIDDSEPILDAAAQFGIRY-CLGVTNPDSGIA 201 (224)
T ss_pred HH--cCC-Ch-HHEE--EEcCCHHHHHHHHHcCCeE-EEEEeCCCCCcc
Confidence 11 122 22 1234 4899999999999999965 122345665543
No 82
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=95.19 E-value=0.043 Score=55.26 Aligned_cols=93 Identities=15% Similarity=0.163 Sum_probs=53.1
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCC--CceecCCCCCCccchhhhhccCchHHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPD--GPVVISPDGLFPSLFREVIRRAPHEFKIAC 959 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~--GPVLLSPd~Lf~AL~REVI~KkPeeFKIac 959 (1055)
.||+.++...++++|+++.-+|+.+.. .++..|+. .+|.. -.++.+. .. .+ -.++|+.|...+
T Consensus 84 ~~g~~~~l~~L~~~g~~~~i~S~~~~~---~~~~~l~~-----~gl~~~f~~i~~~~-~~----~~--~Kp~p~~~~~~~ 148 (214)
T PRK13288 84 YETVYETLKTLKKQGYKLGIVTTKMRD---TVEMGLKL-----TGLDEFFDVVITLD-DV----EH--AKPDPEPVLKAL 148 (214)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHH-----cCChhceeEEEecC-cC----CC--CCCCcHHHHHHH
Confidence 478888888999999999999998743 33334431 12221 1122211 10 11 123445555433
Q ss_pred HHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCC
Q 001552 960 LEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPR 995 (1055)
Q Consensus 960 L~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~ 995 (1055)
+.+ . +++ ...+| +|++.+|+.|=+++|++.
T Consensus 149 -~~~-~-~~~-~~~~~--iGDs~~Di~aa~~aG~~~ 178 (214)
T PRK13288 149 -ELL-G-AKP-EEALM--VGDNHHDILAGKNAGTKT 178 (214)
T ss_pred -HHc-C-CCH-HHEEE--ECCCHHHHHHHHHCCCeE
Confidence 221 1 111 22344 999999999999999963
No 83
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=95.09 E-value=0.16 Score=52.37 Aligned_cols=95 Identities=22% Similarity=0.227 Sum_probs=59.8
Q ss_pred ChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCchHHHHHHH
Q 001552 881 SQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFKIACL 960 (1055)
Q Consensus 881 TH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL 960 (1055)
..+||.++...++..||++.-+|+++-..+..+-+.+ |..-.-.-++. . ...-.+||+.-.+..+
T Consensus 90 ~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~------gl~~~F~~i~g-~--------~~~~~~KP~P~~l~~~ 154 (220)
T COG0546 90 LFPGVKELLAALKSAGYKLGIVTNKPERELDILLKAL------GLADYFDVIVG-G--------DDVPPPKPDPEPLLLL 154 (220)
T ss_pred cCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHh------CCccccceEEc-C--------CCCCCCCcCHHHHHHH
Confidence 4789999999999999999999999877666665554 21111111111 1 2233457775444432
Q ss_pred HHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCC
Q 001552 961 EDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIP 994 (1055)
Q Consensus 961 ~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP 994 (1055)
-.-...=|. .-+ ..|++..|+.|=+++|++
T Consensus 155 ~~~~~~~~~--~~l--~VGDs~~Di~aA~~Ag~~ 184 (220)
T COG0546 155 LEKLGLDPE--EAL--MVGDSLNDILAAKAAGVP 184 (220)
T ss_pred HHHhCCChh--heE--EECCCHHHHHHHHHcCCC
Confidence 222222121 124 489999999999999966
No 84
>PLN02887 hydrolase family protein
Probab=95.04 E-value=0.039 Score=65.80 Aligned_cols=58 Identities=17% Similarity=0.286 Sum_probs=46.2
Q ss_pred eEEEEEecCCCcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHH
Q 001552 842 DARIYLWKWNTRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQA 910 (1055)
Q Consensus 842 ea~IYLW~~~dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqA 910 (1055)
.+.+-+++..-|+|++||||||..++- .| .+...+..++++++|++|+..|+|+...+
T Consensus 298 ~~~~~~~~~~iKLIa~DLDGTLLn~d~--~I---------s~~t~eAI~kl~ekGi~~vIATGR~~~~i 355 (580)
T PLN02887 298 EGSLRFYKPKFSYIFCDMDGTLLNSKS--QI---------SETNAKALKEALSRGVKVVIATGKARPAV 355 (580)
T ss_pred hcchhhhccCccEEEEeCCCCCCCCCC--cc---------CHHHHHHHHHHHHCCCeEEEEcCCCHHHH
Confidence 345556677789999999999998652 22 25567889999999999999999998754
No 85
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=94.86 E-value=0.17 Score=52.75 Aligned_cols=55 Identities=16% Similarity=0.200 Sum_probs=42.1
Q ss_pred CCcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHH
Q 001552 851 NTRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLF 918 (1055)
Q Consensus 851 ~dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~ 918 (1055)
.-++|++|+|||+.... .+-||+.++.+.++++|+++.+||..+-..+... ..|.
T Consensus 7 ~~~~~~~D~dG~l~~~~------------~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~-~~L~ 61 (242)
T TIGR01459 7 DYDVFLLDLWGVIIDGN------------HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLH-KTLK 61 (242)
T ss_pred cCCEEEEecccccccCC------------ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHH-HHHH
Confidence 34689999999998632 2359999999999999999999999765443332 3453
No 86
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=94.83 E-value=0.042 Score=53.32 Aligned_cols=90 Identities=17% Similarity=0.202 Sum_probs=48.6
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhh--ccCchHHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVI--RRAPHEFKIAC 959 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI--~KkPeeFKIac 959 (1055)
.|||.++...++++||++.-+|+.... +..|.. .+|-. . .+..+.+ -++. .+.|+.|+.++
T Consensus 89 ~pg~~~~L~~L~~~g~~~~i~s~~~~~-----~~~l~~-----~~l~~--~---f~~~~~~--~~~~~~kp~p~~~~~~~ 151 (185)
T TIGR01990 89 LPGIKNLLDDLKKNNIKIALASASKNA-----PTVLEK-----LGLID--Y---FDAIVDP--AEIKKGKPDPEIFLAAA 151 (185)
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCccH-----HHHHHh-----cCcHh--h---CcEEEeh--hhcCCCCCChHHHHHHH
Confidence 478888888898999998888875321 223431 11110 0 0111111 1112 23444566543
Q ss_pred HHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCC
Q 001552 960 LEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIP 994 (1055)
Q Consensus 960 L~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP 994 (1055)
-+ + .+ ++ ...+| +|++.+|+.+=+++|++
T Consensus 152 ~~-~-~~-~~-~~~v~--vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 152 EG-L-GV-SP-SECIG--IEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HH-c-CC-CH-HHeEE--EecCHHHHHHHHHcCCE
Confidence 21 1 11 11 12344 88999999999999985
No 87
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=94.80 E-value=0.1 Score=55.79 Aligned_cols=91 Identities=13% Similarity=0.205 Sum_probs=51.7
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCC--CceecCCCCCCccchhhhhccCch--HHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPD--GPVVISPDGLFPSLFREVIRRAPH--EFKI 957 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~--GPVLLSPd~Lf~AL~REVI~KkPe--eFKI 957 (1055)
.+|+.++...++++||++.-+|+.+...+. ..|.. .+|.. ..++.+ +. +-.++|+ .|+.
T Consensus 103 ~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~---~~l~~-----~~i~~~f~~i~~~-d~--------~~~~Kp~p~~~~~ 165 (272)
T PRK13223 103 YPGVRDTLKWLKKQGVEMALITNKPERFVA---PLLDQ-----MKIGRYFRWIIGG-DT--------LPQKKPDPAALLF 165 (272)
T ss_pred CCCHHHHHHHHHHCCCeEEEEECCcHHHHH---HHHHH-----cCcHhhCeEEEec-CC--------CCCCCCCcHHHHH
Confidence 588888888999999999999997654322 22221 11210 112222 11 1123444 3443
Q ss_pred HHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCC
Q 001552 958 ACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPR 995 (1055)
Q Consensus 958 acL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~ 995 (1055)
.+ +. ..+-|. .-+ .+|++.+|+.+=+++|+..
T Consensus 166 ~~-~~-~g~~~~--~~l--~IGD~~~Di~aA~~aGi~~ 197 (272)
T PRK13223 166 VM-KM-AGVPPS--QSL--FVGDSRSDVLAAKAAGVQC 197 (272)
T ss_pred HH-HH-hCCChh--HEE--EECCCHHHHHHHHHCCCeE
Confidence 33 21 122111 233 4999999999999999973
No 88
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=94.54 E-value=0.17 Score=52.53 Aligned_cols=123 Identities=15% Similarity=0.137 Sum_probs=73.4
Q ss_pred ChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCC---CceecCCCCCCccchhhhhccCchHHHH
Q 001552 881 SQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPD---GPVVISPDGLFPSLFREVIRRAPHEFKI 957 (1055)
Q Consensus 881 TH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~---GPVLLSPd~Lf~AL~REVI~KkPeeFKI 957 (1055)
..||+.++...++++| +++-+|+-.-..+....+.| +++. -.+....++.+ ..+.+. ...-|.
T Consensus 69 l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~l--------gi~~~~an~l~~~~~g~~---tG~~~~--~~~~K~ 134 (203)
T TIGR02137 69 PLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQL--------GFPTLLCHKLEIDDSDRV---VGYQLR--QKDPKR 134 (203)
T ss_pred CCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHc--------CCchhhceeeEEecCCee---ECeeec--CcchHH
Confidence 4899999999999985 99999998666555443333 2331 00111110111 111111 123477
Q ss_pred HHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCCCcEEEECCCCceeeeccc--CCcchhhHHhhhc
Q 001552 958 ACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPRGKIFIINPKGEVVVNHRV--DSKTYSSIHALVH 1026 (1055)
Q Consensus 958 acL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~sRIFiINpkGel~~e~~~--~~sSY~~L~dlVD 1026 (1055)
.+++.++.. ....+ ++|+..+|+.+.+.+|++. .++++-.|...... -..+|..|-+..+
T Consensus 135 ~~l~~l~~~----~~~~v-~vGDs~nDl~ml~~Ag~~i----a~~ak~~~~~~~~~~~~~~~~~~~~~~~~ 196 (203)
T TIGR02137 135 QSVIAFKSL----YYRVI-AAGDSYNDTTMLSEAHAGI----LFHAPENVIREFPQFPAVHTYEDLKREFL 196 (203)
T ss_pred HHHHHHHhh----CCCEE-EEeCCHHHHHHHHhCCCCE----EecCCHHHHHhCCCCCcccCHHHHHHHHH
Confidence 777777654 11344 7999999999999999873 56676666533211 1367777666554
No 89
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=94.50 E-value=0.13 Score=52.84 Aligned_cols=132 Identities=17% Similarity=0.256 Sum_probs=70.3
Q ss_pred CcEEEEecCCccccccccc----ccc----------cccCCC-CChhhHHHHHHHHHHcCCeEEEEccc-hhhHHHHHHH
Q 001552 852 TRIVISDVDGTITKSDVLG----QFM----------PLVGVD-WSQTGVAHLFSAIKENGYQLLFLSAR-AIVQAYHTRR 915 (1055)
Q Consensus 852 dKIVISDIDGTITKSDvlG----hIl----------P~LGkD-WTH~GVAkLYskI~~NGYkILYLSAR-pIgqAd~TR~ 915 (1055)
+|+||||.|+|+...-.-. -+- -..+.. -..+||.++...|+++||++.-+|+. +...+...-+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~ 81 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILG 81 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHH
Confidence 5899999999997532111 111 112222 23799999999999999999999987 6554433323
Q ss_pred HHHhcccCCcCCCCCceecCCCCCCccchhhhhccCchHHHHHHHHHHHhhC----CCCCCCEEEccCCCchhHHHHHhc
Q 001552 916 FLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKALF----PSDCNPFYAGFGNRDTDEISYLKV 991 (1055)
Q Consensus 916 yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~LF----P~~~nPFyAGFGNR~TDv~AYraV 991 (1055)
.+. +...+...|.=..+ +....+ .+. .++..+. .+++.+...+ .+ ...+| +|++..|+.+=+++
T Consensus 82 ~~~-l~~~~~~~~~~~~F---d~iv~~--~~~--~~~kp~~-~i~~~~~~~~~~gl~p-~e~l~--VgDs~~di~aA~~a 149 (174)
T TIGR01685 82 TFE-ITYAGKTVPMHSLF---DDRIEI--YKP--NKAKQLE-MILQKVNKVDPSVLKP-AQILF--FDDRTDNVREVWGY 149 (174)
T ss_pred hCC-cCCCCCcccHHHhc---eeeeec--cCC--chHHHHH-HHHHHhhhcccCCCCH-HHeEE--EcChhHhHHHHHHh
Confidence 321 10111111100000 000100 111 1111111 2244444332 22 23455 99999999999999
Q ss_pred CCCC
Q 001552 992 GIPR 995 (1055)
Q Consensus 992 GIP~ 995 (1055)
|+..
T Consensus 150 Gi~~ 153 (174)
T TIGR01685 150 GVTS 153 (174)
T ss_pred CCEE
Confidence 9865
No 90
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=94.39 E-value=0.095 Score=56.55 Aligned_cols=90 Identities=19% Similarity=0.118 Sum_probs=50.4
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCC-CceecCCCCCCccchhhhhccCchHHHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPD-GPVVISPDGLFPSLFREVIRRAPHEFKIACL 960 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~-GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL 960 (1055)
.|||.++...++++|+++..+|+..-..+...-+.+ +|.. =..+.+.+ + ...+|+ .+
T Consensus 144 ~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~--------gl~~~F~~vi~~~--------~-~~~k~~-----~~ 201 (273)
T PRK13225 144 FPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQ--------GLRSLFSVVQAGT--------P-ILSKRR-----AL 201 (273)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc--------CChhheEEEEecC--------C-CCCCHH-----HH
Confidence 578888888999999999999987644333332222 1210 00111111 1 112333 33
Q ss_pred HHHHhhCCCC-CCCEEEccCCCchhHHHHHhcCCCC
Q 001552 961 EDIKALFPSD-CNPFYAGFGNRDTDEISYLKVGIPR 995 (1055)
Q Consensus 961 ~dIk~LFP~~-~nPFyAGFGNR~TDv~AYraVGIP~ 995 (1055)
..+...+.-. ..-+ -+|++..|+.+=+++|+..
T Consensus 202 ~~~l~~~~~~p~~~l--~IGDs~~Di~aA~~AG~~~ 235 (273)
T PRK13225 202 SQLVAREGWQPAAVM--YVGDETRDVEAARQVGLIA 235 (273)
T ss_pred HHHHHHhCcChhHEE--EECCCHHHHHHHHHCCCeE
Confidence 3333332211 1234 4899999999999999854
No 91
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=94.37 E-value=0.4 Score=50.20 Aligned_cols=132 Identities=20% Similarity=0.208 Sum_probs=82.1
Q ss_pred CCcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccc--------hhhHHHHHHH-HHHhcc
Q 001552 851 NTRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSAR--------AIVQAYHTRR-FLFTLK 921 (1055)
Q Consensus 851 ~dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSAR--------pIgqAd~TR~-yL~~i~ 921 (1055)
..|++..|-||||-+-.-- .+. .+-+=+-.+|+.....++.+.||+++-+|-- +........+ -++.++
T Consensus 4 ~~k~lflDRDGtin~d~~~-yv~-~~~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~ 81 (181)
T COG0241 4 DQKALFLDRDGTINIDKGD-YVD-SLDDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILA 81 (181)
T ss_pred CCcEEEEcCCCceecCCCc-ccC-cHHHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHH
Confidence 4789999999999974321 111 1122234899999999999999999999972 2222222223 333445
Q ss_pred cCCcCCCCCceecCCCCCCccchhhhhccCchHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCC
Q 001552 922 QDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIP 994 (1055)
Q Consensus 922 Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP 994 (1055)
+.|..|. + +++.|..--. .-.-|+| |..+|..+..-|..+-.-.| -.|+|.+|+.+=.++||.
T Consensus 82 ~~gv~id-~-i~~Cph~p~~----~c~cRKP---~~gm~~~~~~~~~iD~~~s~-~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 82 SQGVKID-G-ILYCPHHPED----NCDCRKP---KPGMLLSALKEYNIDLSRSY-VVGDRLTDLQAAENAGIK 144 (181)
T ss_pred HcCCccc-e-EEECCCCCCC----CCcccCC---ChHHHHHHHHHhCCCccceE-EecCcHHHHHHHHHCCCC
Confidence 6676664 2 4444532110 0123445 55666666655554444444 478999999999999998
No 92
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=94.33 E-value=0.055 Score=56.33 Aligned_cols=53 Identities=15% Similarity=0.211 Sum_probs=38.8
Q ss_pred cEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHH
Q 001552 853 RIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHT 913 (1055)
Q Consensus 853 KIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~T 913 (1055)
.+|++|+|||++.++- + ..-.-+..-+++++++++|-+|+++|+|+...+...
T Consensus 2 ~li~tDlDGTLl~~~~-~-------~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~ 54 (249)
T TIGR01485 2 LLLVSDLDNTLVDHTD-G-------DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKEL 54 (249)
T ss_pred eEEEEcCCCcCcCCCC-C-------ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHH
Confidence 4789999999997431 0 011126667778888999999999999998765544
No 93
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=94.12 E-value=0.1 Score=55.83 Aligned_cols=54 Identities=19% Similarity=0.216 Sum_probs=39.7
Q ss_pred CcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHH-cCCeEEEEccchhhHHH
Q 001552 852 TRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKE-NGYQLLFLSARAIVQAY 911 (1055)
Q Consensus 852 dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~-NGYkILYLSARpIgqAd 911 (1055)
..+|++|+||||+..- +.-..-...+...+...++++ +|.+|+.+|+|+.....
T Consensus 14 ~~li~~D~DGTLl~~~------~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~ 68 (266)
T PRK10187 14 NYAWFFDLDGTLAEIK------PHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELD 68 (266)
T ss_pred CEEEEEecCCCCCCCC------CCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHH
Confidence 4789999999999620 000111234788888999987 79999999999887653
No 94
>PLN02940 riboflavin kinase
Probab=93.78 E-value=0.16 Score=57.30 Aligned_cols=93 Identities=15% Similarity=0.148 Sum_probs=52.8
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCc--hHHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAP--HEFKIAC 959 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkP--eeFKIac 959 (1055)
.+|+.++...++++|+++.-+|+.+-..+. ..|.....-...|. .++. .+ ++..++| +.|..++
T Consensus 95 ~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~---~~l~~~~gl~~~Fd--~ii~-~d--------~v~~~KP~p~~~~~a~ 160 (382)
T PLN02940 95 LPGANRLIKHLKSHGVPMALASNSPRANIE---AKISCHQGWKESFS--VIVG-GD--------EVEKGKPSPDIFLEAA 160 (382)
T ss_pred CcCHHHHHHHHHHCCCcEEEEeCCcHHHHH---HHHHhccChHhhCC--EEEe-hh--------hcCCCCCCHHHHHHHH
Confidence 588888889999999999999998644332 23320000001111 2222 22 2223345 4555443
Q ss_pred HHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCC
Q 001552 960 LEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIP 994 (1055)
Q Consensus 960 L~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP 994 (1055)
+.+ .+ ++ ...+ .+|++..|+.|=+++|+.
T Consensus 161 -~~l-gv-~p-~~~l--~VGDs~~Di~aA~~aGi~ 189 (382)
T PLN02940 161 -KRL-NV-EP-SNCL--VIEDSLPGVMAGKAAGME 189 (382)
T ss_pred -HHc-CC-Ch-hHEE--EEeCCHHHHHHHHHcCCE
Confidence 222 22 22 1233 489999999999999997
No 95
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=93.74 E-value=0.4 Score=47.62 Aligned_cols=113 Identities=20% Similarity=0.245 Sum_probs=66.5
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCc-hHHHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAP-HEFKIACL 960 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkP-eeFKIacL 960 (1055)
.+|+.++...++++|+++.-+|+.+-.+....-+.|. +. +.+.. .+....++.+ ..++..... ..-|...+
T Consensus 89 ~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg-~~---~~~~~-~l~~~~~g~~---~g~~~~~~~~g~~K~~~l 160 (202)
T TIGR01490 89 YPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILG-ID---NAIGT-RLEESEDGIY---TGNIDGNNCKGEGKVHAL 160 (202)
T ss_pred cHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcC-Cc---ceEec-ceEEcCCCEE---eCCccCCCCCChHHHHHH
Confidence 5688888888999999999999988766555544441 11 11110 0122122222 111111111 14577777
Q ss_pred HHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCCCcEEEECCCCce
Q 001552 961 EDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPRGKIFIINPKGEV 1007 (1055)
Q Consensus 961 ~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~sRIFiINpkGel 1007 (1055)
+.+........... .+||++.+|+.+-+.+|.+ +.|||+..|
T Consensus 161 ~~~~~~~~~~~~~~-~~~gDs~~D~~~~~~a~~~----~~v~~~~~l 202 (202)
T TIGR01490 161 AELLAEEQIDLKDS-YAYGDSISDLPLLSLVGHP----YVVNPDKKL 202 (202)
T ss_pred HHHHHHcCCCHHHc-EeeeCCcccHHHHHhCCCc----EEeCCCCCC
Confidence 77665433221123 3699999999999999965 478887653
No 96
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=93.62 E-value=0.13 Score=62.80 Aligned_cols=56 Identities=23% Similarity=0.344 Sum_probs=42.3
Q ss_pred CCcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHH
Q 001552 851 NTRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFL 917 (1055)
Q Consensus 851 ~dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL 917 (1055)
..|+|++|+||||+.++-. .+ +-..+..++++++|++|+..|+|+.........-|
T Consensus 415 ~~KLIfsDLDGTLLd~d~~---------i~--~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~L 470 (694)
T PRK14502 415 FKKIVYTDLDGTLLNPLTY---------SY--STALDALRLLKDKELPLVFCSAKTMGEQDLYRNEL 470 (694)
T ss_pred eeeEEEEECcCCCcCCCCc---------cC--HHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHc
Confidence 3488999999999986531 12 33567888999999999999999988655544444
No 97
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=93.49 E-value=0.36 Score=48.19 Aligned_cols=93 Identities=16% Similarity=0.221 Sum_probs=50.4
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCc--hHHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAP--HEFKIAC 959 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkP--eeFKIac 959 (1055)
.+|+.++.+.++++ |++.-+|+.....+......+. + ..+-+ -++.+. ++...+| +.|..++
T Consensus 99 ~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~-l----~~~fd-~i~~~~---------~~~~~KP~~~~~~~~~ 162 (224)
T TIGR02254 99 LPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSG-L----FPFFD-DIFVSE---------DAGIQKPDKEIFNYAL 162 (224)
T ss_pred CccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCC-c----HhhcC-EEEEcC---------ccCCCCCCHHHHHHHH
Confidence 56777777788888 8888888875544433322221 0 01111 122221 1222344 4555333
Q ss_pred HHHHHhhCCCCCCCEEEccCCCc-hhHHHHHhcCCCC
Q 001552 960 LEDIKALFPSDCNPFYAGFGNRD-TDEISYLKVGIPR 995 (1055)
Q Consensus 960 L~dIk~LFP~~~nPFyAGFGNR~-TDv~AYraVGIP~ 995 (1055)
+.+..+=|. .-+| +|++. +|+.+-+++|++.
T Consensus 163 -~~~~~~~~~--~~v~--igD~~~~di~~A~~~G~~~ 194 (224)
T TIGR02254 163 -ERMPKFSKE--EVLM--IGDSLTADIKGGQNAGLDT 194 (224)
T ss_pred -HHhcCCCch--heEE--ECCCcHHHHHHHHHCCCcE
Confidence 222122122 2344 88887 7999999999986
No 98
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=93.40 E-value=0.45 Score=51.39 Aligned_cols=78 Identities=19% Similarity=0.308 Sum_probs=57.8
Q ss_pred CCcEEEEecCCcccccc-cccc----------ccc----------ccC------------CCCChhhHHHHHHHHHHcCC
Q 001552 851 NTRIVISDVDGTITKSD-VLGQ----------FMP----------LVG------------VDWSQTGVAHLFSAIKENGY 897 (1055)
Q Consensus 851 ~dKIVISDIDGTITKSD-vlGh----------IlP----------~LG------------kDWTH~GVAkLYskI~~NGY 897 (1055)
.+-.||+|||.||..+. .+|+ +.+ .+. ..-.++.+..+.+.|++.|.
T Consensus 19 ~~tLvvfDiDdTLi~~~~~lg~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~lie~~~~~~i~~lq~~~~ 98 (252)
T PF11019_consen 19 QDTLVVFDIDDTLITPKQPLGSPAWYQWQLGKLQKRGKSEYKAVECIFEEWLSLIFELRKMELIESDVPNIINSLQNKGI 98 (252)
T ss_pred CCeEEEEEcchhhhcCccccCCchhHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhhcceEEcchhHHHHHHHHHHCCC
Confidence 55679999999998776 4453 201 011 12347788888999999999
Q ss_pred eEEEEccchhhHHHHHHHHHHhcccCCcCCCCCc
Q 001552 898 QLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGP 931 (1055)
Q Consensus 898 kILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GP 931 (1055)
++|=||+|+..+...|-..|+. .|..|-.-+
T Consensus 99 ~v~alT~~~~~~~~~t~~~Lk~---~gi~fs~~~ 129 (252)
T PF11019_consen 99 PVIALTARGPNMEDWTLRELKS---LGIDFSSSS 129 (252)
T ss_pred cEEEEcCCChhhHHHHHHHHHH---CCCCccccc
Confidence 9999999999999999999974 366665443
No 99
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=93.29 E-value=0.15 Score=55.89 Aligned_cols=70 Identities=20% Similarity=0.280 Sum_probs=52.3
Q ss_pred CcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCc
Q 001552 852 TRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGP 931 (1055)
Q Consensus 852 dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GP 931 (1055)
-+++++|+||||-+. ..+-||++++.+.|+++|-+++|||..+.--......-|.++ .+...+..-
T Consensus 8 y~~~l~DlDGvl~~G------------~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~--~~~~~~~~~ 73 (269)
T COG0647 8 YDGFLFDLDGVLYRG------------NEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSL--GGVDVTPDD 73 (269)
T ss_pred cCEEEEcCcCceEeC------------CccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhh--cCCCCCHHH
Confidence 356999999999963 345799999999999999999999999887777666666421 233345444
Q ss_pred eecC
Q 001552 932 VVIS 935 (1055)
Q Consensus 932 VLLS 935 (1055)
+++|
T Consensus 74 i~TS 77 (269)
T COG0647 74 IVTS 77 (269)
T ss_pred eecH
Confidence 5554
No 100
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=93.23 E-value=0.11 Score=54.45 Aligned_cols=39 Identities=21% Similarity=0.440 Sum_probs=33.2
Q ss_pred EEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccc
Q 001552 855 VISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSAR 905 (1055)
Q Consensus 855 VISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSAR 905 (1055)
||||+||||..++- ..+|+.+.+..++++|++++++|..
T Consensus 1 ~lfD~DGvL~~~~~------------~~~~a~e~i~~l~~~g~~~~~~tN~ 39 (236)
T TIGR01460 1 FLFDIDGVLWLGHK------------PIPGAAEALNRLRAKGKPVVFLTNN 39 (236)
T ss_pred CEEeCcCccCcCCc------------cCcCHHHHHHHHHHCCCeEEEEECC
Confidence 68999999998532 2579999999999999999999943
No 101
>PRK09449 dUMP phosphatase; Provisional
Probab=93.11 E-value=0.33 Score=49.09 Aligned_cols=91 Identities=21% Similarity=0.246 Sum_probs=49.0
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCC--CceecCCCCCCccchhhhhccCch--HHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPD--GPVVISPDGLFPSLFREVIRRAPH--EFKI 957 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~--GPVLLSPd~Lf~AL~REVI~KkPe--eFKI 957 (1055)
.||+.++...|+ +||++..+|..+.. .++..|.. .+|.. -.++.+- ++..+||+ .|..
T Consensus 97 ~~g~~~~L~~L~-~~~~~~i~Tn~~~~---~~~~~l~~-----~~l~~~fd~v~~~~---------~~~~~KP~p~~~~~ 158 (224)
T PRK09449 97 LPGAVELLNALR-GKVKMGIITNGFTE---LQQVRLER-----TGLRDYFDLLVISE---------QVGVAKPDVAIFDY 158 (224)
T ss_pred CccHHHHHHHHH-hCCeEEEEeCCcHH---HHHHHHHh-----CChHHHcCEEEEEC---------ccCCCCCCHHHHHH
Confidence 577778888888 57998888885433 33333421 11210 1122221 22223454 4443
Q ss_pred HHHHHHHhhCCCCCCCEEEccCCCc-hhHHHHHhcCCCC
Q 001552 958 ACLEDIKALFPSDCNPFYAGFGNRD-TDEISYLKVGIPR 995 (1055)
Q Consensus 958 acL~dIk~LFP~~~nPFyAGFGNR~-TDv~AYraVGIP~ 995 (1055)
. ++.+ .+.|+ ..-+| +|++. +|+.+=+++|+..
T Consensus 159 ~-~~~~-~~~~~-~~~~~--vgD~~~~Di~~A~~aG~~~ 192 (224)
T PRK09449 159 A-LEQM-GNPDR-SRVLM--VGDNLHSDILGGINAGIDT 192 (224)
T ss_pred H-HHHc-CCCCc-ccEEE--EcCCcHHHHHHHHHCCCcE
Confidence 2 2222 22222 12344 78897 6999999999964
No 102
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=92.86 E-value=0.1 Score=57.18 Aligned_cols=41 Identities=17% Similarity=0.336 Sum_probs=35.7
Q ss_pred EEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHc----CCeEEEEccch
Q 001552 854 IVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKEN----GYQLLFLSARA 906 (1055)
Q Consensus 854 IVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~N----GYkILYLSARp 906 (1055)
+||||+||||..+.. .++|+.+.++.+..+ |+++++||...
T Consensus 2 ~~ifD~DGvL~~g~~------------~i~ga~eal~~L~~~~~~~g~~~~flTNn~ 46 (321)
T TIGR01456 2 GFAFDIDGVLFRGKK------------PIAGASDALRRLNRNQGQLKIPYIFLTNGG 46 (321)
T ss_pred EEEEeCcCceECCcc------------ccHHHHHHHHHHhccccccCCCEEEEecCC
Confidence 589999999998532 279999999999999 99999999764
No 103
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=92.28 E-value=0.15 Score=54.00 Aligned_cols=48 Identities=21% Similarity=0.442 Sum_probs=35.2
Q ss_pred CcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHH---HcCCeEEEEccchhhHHHHH
Q 001552 852 TRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIK---ENGYQLLFLSARAIVQAYHT 913 (1055)
Q Consensus 852 dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~---~NGYkILYLSARpIgqAd~T 913 (1055)
.++++||+|||++..+ ..+.+.|+.-++ ..+-.|+|+|+|.+.++...
T Consensus 2 ~~ll~sDlD~Tl~~~~--------------~~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~~~ 52 (247)
T PF05116_consen 2 PRLLASDLDGTLIDGD--------------DEALARLEELLEQQARPEILFVYVTGRSLESVLRL 52 (247)
T ss_dssp SEEEEEETBTTTBHCH--------------HHHHHHHHHHHHHHHCCGEEEEEE-SS-HHHHHHH
T ss_pred CEEEEEECCCCCcCCC--------------HHHHHHHHHHHHHhhCCCceEEEECCCCHHHHHHH
Confidence 4689999999999222 256677777666 67899999999999877644
No 104
>PLN02423 phosphomannomutase
Probab=92.10 E-value=0.3 Score=51.67 Aligned_cols=51 Identities=14% Similarity=0.239 Sum_probs=36.5
Q ss_pred CcE-EEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHH
Q 001552 852 TRI-VISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFL 917 (1055)
Q Consensus 852 dKI-VISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL 917 (1055)
.|+ +.+|||||++.++- ++ .+...+.+++++++ ++|+-.|+|++ ...+..+
T Consensus 6 ~~~i~~~D~DGTLl~~~~--~i---------~~~~~~ai~~l~~~-i~fviaTGR~~---~~~~~~~ 57 (245)
T PLN02423 6 PGVIALFDVDGTLTAPRK--EA---------TPEMLEFMKELRKV-VTVGVVGGSDL---SKISEQL 57 (245)
T ss_pred cceEEEEeccCCCcCCCC--cC---------CHHHHHHHHHHHhC-CEEEEECCcCH---HHHHHHh
Confidence 354 55999999998652 22 25667889999977 99999999944 3444444
No 105
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=92.10 E-value=0.48 Score=54.38 Aligned_cols=94 Identities=14% Similarity=0.165 Sum_probs=54.5
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCchHHHHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFKIACLE 961 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL~ 961 (1055)
.+||.+++..|+++||++.-+|+++...+...-+-+. + ..+-+ .++.+.+. . + ..+.|+.|..++ +
T Consensus 218 ~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lg-L----~~yFd-~Iv~sddv-~----~--~KP~Peifl~A~-~ 283 (381)
T PLN02575 218 RTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIG-I----RGFFS-VIVAAEDV-Y----R--GKPDPEMFIYAA-Q 283 (381)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcC-C----HHHce-EEEecCcC-C----C--CCCCHHHHHHHH-H
Confidence 4688889999999999999999987544443332220 1 01111 23332221 0 0 123444555443 2
Q ss_pred HHHhhCCCCCCCEEEccCCCchhHHHHHhcCCC
Q 001552 962 DIKALFPSDCNPFYAGFGNRDTDEISYLKVGIP 994 (1055)
Q Consensus 962 dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP 994 (1055)
.+ .+ .+ ..-+ .||++.+|+.|=+++|+.
T Consensus 284 ~l-gl-~P-eecl--~IGDS~~DIeAAk~AGm~ 311 (381)
T PLN02575 284 LL-NF-IP-ERCI--VFGNSNQTVEAAHDARMK 311 (381)
T ss_pred Hc-CC-Cc-ccEE--EEcCCHHHHHHHHHcCCE
Confidence 22 22 22 2244 499999999999999994
No 106
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=92.03 E-value=0.55 Score=52.66 Aligned_cols=120 Identities=18% Similarity=0.194 Sum_probs=70.5
Q ss_pred CcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCC--
Q 001552 852 TRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPD-- 929 (1055)
Q Consensus 852 dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~-- 929 (1055)
.++|+||+||||..++- ++ .-.-|||.++...++++|+++.-+|+.+-..+ +..|. ..+|+.
T Consensus 128 ~~~i~~D~D~TL~~~~~--~v------~irdp~V~EtL~eLkekGikLaIvTNg~Re~v---~~~Le-----~lgL~~yF 191 (303)
T PHA03398 128 PHVIVFDLDSTLITDEE--PV------RIRDPFVYDSLDELKERGCVLVLWSYGNREHV---VHSLK-----ETKLEGYF 191 (303)
T ss_pred ccEEEEecCCCccCCCC--cc------ccCChhHHHHHHHHHHCCCEEEEEcCCChHHH---HHHHH-----HcCCCccc
Confidence 58999999999998643 11 01139999999999999999999997644433 55564 344542
Q ss_pred CceecCCCCCCccchhhhhccCchHHHHHHHHHHHhhCCCCCCCEEEccCC------CchhHHHHHh-cCCCCCcEEE
Q 001552 930 GPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGN------RDTDEISYLK-VGIPRGKIFI 1000 (1055)
Q Consensus 930 GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGN------R~TDv~AYra-VGIP~sRIFi 1000 (1055)
-.++.+.+....+-.|+..+.+- ...|- ..|||.-... .++.+.-|.+ .||.--+.+|
T Consensus 192 DvII~~g~i~~k~~~~~~~d~~~-----------~~~~~--~~~f~~d~~~~~~lPKSprvVl~yL~~~gvn~~KtiT 256 (303)
T PHA03398 192 DIIICGGRKAGEYSRRVIVDNKY-----------KMVFV--KKPFYLDVTDVKNLPKSPRVVLWYLRKKGVNYFKTIT 256 (303)
T ss_pred cEEEECCCcccccccceeecccc-----------eeEEe--cCceeEeCCcccCCCCCCeehHHHHHHcCcceeccEE
Confidence 13455544444443444334321 12232 2488855442 2445555544 4555544443
No 107
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=91.56 E-value=0.42 Score=53.51 Aligned_cols=62 Identities=13% Similarity=0.149 Sum_probs=45.6
Q ss_pred EEEecCCCcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHH
Q 001552 845 IYLWKWNTRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLF 918 (1055)
Q Consensus 845 IYLW~~~dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~ 918 (1055)
.++|.. .++|+||+||||....-.. .-..|||.++...++++|+++.-+|+++-..+. ..|.
T Consensus 120 ~~~~~~-~kvIvFDLDgTLi~~~~~v--------~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~---~~L~ 181 (301)
T TIGR01684 120 SKVFEP-PHVVVFDLDSTLITDEEPV--------RIRDPRIYDSLTELKKRGCILVLWSYGDRDHVV---ESMR 181 (301)
T ss_pred cccccc-ceEEEEecCCCCcCCCCcc--------ccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHH---HHHH
Confidence 355643 5799999999999864211 112499999999999999999999977655443 4553
No 108
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=91.42 E-value=0.58 Score=59.49 Aligned_cols=92 Identities=15% Similarity=0.146 Sum_probs=55.0
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCC---CCceecCCCCCCccchhhhhccCchHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALP---DGPVVISPDGLFPSLFREVIRRAPHEFKIA 958 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP---~GPVLLSPd~Lf~AL~REVI~KkPeeFKIa 958 (1055)
.||+.++.+.|+++||++..+|+.....++.. |+ ..+|+ --.++.+.+- .+ ..+.|+.|..
T Consensus 163 ~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~---L~-----~~gl~~~~Fd~iv~~~~~-----~~--~KP~Pe~~~~- 226 (1057)
T PLN02919 163 FPGALELITQCKNKGLKVAVASSADRIKVDAN---LA-----AAGLPLSMFDAIVSADAF-----EN--LKPAPDIFLA- 226 (1057)
T ss_pred CccHHHHHHHHHhCCCeEEEEeCCcHHHHHHH---HH-----HcCCChhHCCEEEECccc-----cc--CCCCHHHHHH-
Confidence 56778888889999999999999766555433 32 11232 0123322211 11 1334567754
Q ss_pred HHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCC
Q 001552 959 CLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIP 994 (1055)
Q Consensus 959 cL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP 994 (1055)
+++.+. +-|. ..+| +|++..|+.|=+++|+.
T Consensus 227 a~~~lg-v~p~--e~v~--IgDs~~Di~AA~~aGm~ 257 (1057)
T PLN02919 227 AAKILG-VPTS--ECVV--IEDALAGVQAARAAGMR 257 (1057)
T ss_pred HHHHcC-cCcc--cEEE--EcCCHHHHHHHHHcCCE
Confidence 344332 2222 2444 99999999999999984
No 109
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=90.90 E-value=1.7 Score=47.75 Aligned_cols=122 Identities=15% Similarity=0.160 Sum_probs=68.7
Q ss_pred CCcEEEEecCCccccccccccccc-ccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCC
Q 001552 851 NTRIVISDVDGTITKSDVLGQFMP-LVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPD 929 (1055)
Q Consensus 851 ~dKIVISDIDGTITKSDvlGhIlP-~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~ 929 (1055)
.-|+||.|.|+||.. .++|--.+ .+...-.++|+.++...+++.|+++--+|..+.. .++..|+. .-.|.
T Consensus 2 ~~k~~v~DlDnTlw~-gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~---~a~~~l~~----~~~~~- 72 (320)
T TIGR01686 2 ALKVLVLDLDNTLWG-GVLGEDGIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDED---DAKKVFER----RKDFI- 72 (320)
T ss_pred CeEEEEEcCCCCCCC-CEEccCCccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHH---HHHHHHHh----Ccccc-
Confidence 358999999999995 33331111 0111124899999999999999999999998663 44555631 00011
Q ss_pred CceecCCCCCCccchhhhhccCchHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCC
Q 001552 930 GPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGI 993 (1055)
Q Consensus 930 GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGI 993 (1055)
++ + ..|..+. +..+| |-..+..|+..+.-...-++ -+|++..|+.+-++++.
T Consensus 73 ---~~-~-~~f~~~~---~~~~p---k~~~i~~~~~~l~i~~~~~v-fidD~~~d~~~~~~~lp 124 (320)
T TIGR01686 73 ---LQ-A-EDFDARS---INWGP---KSESLRKIAKKLNLGTDSFL-FIDDNPAERANVKITLP 124 (320)
T ss_pred ---Cc-H-HHeeEEE---EecCc---hHHHHHHHHHHhCCCcCcEE-EECCCHHHHHHHHHHCC
Confidence 01 1 1222221 12234 23333333333322112233 48999999999888653
No 110
>PLN02382 probable sucrose-phosphatase
Probab=89.95 E-value=0.46 Score=54.48 Aligned_cols=58 Identities=19% Similarity=0.173 Sum_probs=38.6
Q ss_pred CcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHH
Q 001552 852 TRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFL 917 (1055)
Q Consensus 852 dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL 917 (1055)
..+|+||+|||+..++-- +..+-.-...++.++.++|-.|++.|+|+..++...+.-+
T Consensus 9 ~~lI~sDLDGTLL~~~~~--------~~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~ 66 (413)
T PLN02382 9 RLMIVSDLDHTMVDHHDP--------ENLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEK 66 (413)
T ss_pred CEEEEEcCCCcCcCCCCc--------cchhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhC
Confidence 456999999999975210 0112233445566778899999999999877665554433
No 111
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=89.89 E-value=0.23 Score=51.20 Aligned_cols=45 Identities=18% Similarity=0.287 Sum_probs=32.0
Q ss_pred EEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHH
Q 001552 854 IVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAY 911 (1055)
Q Consensus 854 IVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd 911 (1055)
+|++|+|||++.++- .+. ...++.+ .+++|.+|+.+|+|+...+.
T Consensus 1 li~~DlDgTLl~~~~--~~~----------~~~~~~~-~~~~gi~~viaTGR~~~~v~ 45 (236)
T TIGR02471 1 LIITDLDNTLLGDDE--GLA----------SFVELLR-GSGDAVGFGIATGRSVESAK 45 (236)
T ss_pred CeEEeccccccCCHH--HHH----------HHHHHHH-hcCCCceEEEEeCCCHHHHH
Confidence 478999999998542 121 1225555 48889999999999986543
No 112
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=89.78 E-value=0.28 Score=49.10 Aligned_cols=63 Identities=19% Similarity=0.284 Sum_probs=46.5
Q ss_pred cEEEEecCCcccccccccccc-------c-ccC------CCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHH
Q 001552 853 RIVISDVDGTITKSDVLGQFM-------P-LVG------VDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFL 917 (1055)
Q Consensus 853 KIVISDIDGTITKSDvlGhIl-------P-~LG------kDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL 917 (1055)
+.+|.|+|+||-.|... ... + ..+ .=+-+||+.++...++++ |.|+-.|+-+-..|...-+.|
T Consensus 2 ~~lvlDLDeTLi~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~l 78 (162)
T TIGR02251 2 KTLVLDLDETLVHSTFK-MPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDIL 78 (162)
T ss_pred cEEEEcCCCCcCCCCCC-CCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHH
Confidence 57999999999987432 100 0 001 013579999999999998 999999998877777776666
No 113
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=89.71 E-value=0.64 Score=45.19 Aligned_cols=65 Identities=14% Similarity=0.165 Sum_probs=45.1
Q ss_pred cEEEEecCCcccccccccccc-------ccc-CCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHH
Q 001552 853 RIVISDVDGTITKSDVLGQFM-------PLV-GVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLF 918 (1055)
Q Consensus 853 KIVISDIDGTITKSDvlGhIl-------P~L-GkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~ 918 (1055)
|++|.|+||||..+......- ... ..=+.+||+.+|...+.+. |.++-.|+.....|...-.+|.
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ld 73 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALD 73 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHT
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhh
Confidence 689999999999877654220 000 1123479999999999555 9999999999888888888883
No 114
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=89.04 E-value=0.39 Score=48.51 Aligned_cols=38 Identities=18% Similarity=0.382 Sum_probs=33.2
Q ss_pred ChhhHHHHHHHHHHcCCeEEEEccchhh----HHHHHHHHHH
Q 001552 881 SQTGVAHLFSAIKENGYQLLFLSARAIV----QAYHTRRFLF 918 (1055)
Q Consensus 881 TH~GVAkLYskI~~NGYkILYLSARpIg----qAd~TR~yL~ 918 (1055)
+.+|+.+.+++|.+.||.++|+|+|+.. .+..|++||+
T Consensus 74 p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~ 115 (191)
T PF06941_consen 74 PIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLE 115 (191)
T ss_dssp B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHH
Confidence 5789999999999999999999999887 6889999996
No 115
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=86.97 E-value=3.1 Score=41.51 Aligned_cols=95 Identities=15% Similarity=0.138 Sum_probs=55.8
Q ss_pred ChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCchHHHHHHH
Q 001552 881 SQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFKIACL 960 (1055)
Q Consensus 881 TH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL 960 (1055)
..+||.++.+.++++||++..+|+.+... ++.+|+.+. -..+.+ .++.+.+. .+ -.+.|+.|..++
T Consensus 86 ~~~g~~~~L~~l~~~g~~~~i~S~~~~~~---~~~~l~~~~--l~~~f~-~~~~~~~~-----~~--~Kp~p~~~~~~~- 151 (213)
T TIGR01449 86 VFPGVEATLGALRAKGLRLGLVTNKPTPL---ARPLLELLG--LAKYFS-VLIGGDSL-----AQ--RKPHPDPLLLAA- 151 (213)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCCHHH---HHHHHHHcC--cHhhCc-EEEecCCC-----CC--CCCChHHHHHHH-
Confidence 46899999999999999999999976543 444554211 011111 22222211 01 123344554333
Q ss_pred HHHHhhCCCC-CCCEEEccCCCchhHHHHHhcCCCC
Q 001552 961 EDIKALFPSD-CNPFYAGFGNRDTDEISYLKVGIPR 995 (1055)
Q Consensus 961 ~dIk~LFP~~-~nPFyAGFGNR~TDv~AYraVGIP~ 995 (1055)
..+.-. ..-+ .+|++.+|+.+-+++|++.
T Consensus 152 ----~~~~~~~~~~~--~igDs~~d~~aa~~aG~~~ 181 (213)
T TIGR01449 152 ----ERLGVAPQQMV--YVGDSRVDIQAARAAGCPS 181 (213)
T ss_pred ----HHcCCChhHeE--EeCCCHHHHHHHHHCCCeE
Confidence 222211 1233 4999999999999999964
No 116
>PRK11590 hypothetical protein; Provisional
Probab=86.83 E-value=2.3 Score=43.73 Aligned_cols=110 Identities=10% Similarity=0.080 Sum_probs=65.4
Q ss_pred hhhHHHHH-HHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCC-ceecCCCCCCccchhhhhccCchHHHHHH
Q 001552 882 QTGVAHLF-SAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDG-PVVISPDGLFPSLFREVIRRAPHEFKIAC 959 (1055)
Q Consensus 882 H~GVAkLY-skI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~G-PVLLSPd~Lf~AL~REVI~KkPeeFKIac 959 (1055)
.|||.++. ..+++.||+++-+|+.+-..+...-..|. . ++ | .++.+. +-.-+...+. .+.-+..+.
T Consensus 97 ~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~------~-~~-~~~~i~t~--l~~~~tg~~~--g~~c~g~~K 164 (211)
T PRK11590 97 FPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTP------W-LP-RVNLIASQ--MQRRYGGWVL--TLRCLGHEK 164 (211)
T ss_pred CccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcc------c-cc-cCceEEEE--EEEEEccEEC--CccCCChHH
Confidence 46777777 45677899999999998876665555542 1 00 1 122222 1001111221 233333333
Q ss_pred HHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCCCcEEEECCCCcee
Q 001552 960 LEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPRGKIFIINPKGEVV 1008 (1055)
Q Consensus 960 L~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~sRIFiINpkGel~ 1008 (1055)
++.|+..++. ...-+.+||+..+|.-+...||-| |.|||...|.
T Consensus 165 ~~~l~~~~~~-~~~~~~aY~Ds~~D~pmL~~a~~~----~~vnp~~~l~ 208 (211)
T PRK11590 165 VAQLERKIGT-PLRLYSGYSDSKQDNPLLYFCQHR----WRVTPRGELQ 208 (211)
T ss_pred HHHHHHHhCC-CcceEEEecCCcccHHHHHhCCCC----EEECccHHhh
Confidence 3444444432 223345899999999999999976 7899988775
No 117
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=86.83 E-value=2.8 Score=46.50 Aligned_cols=75 Identities=23% Similarity=0.402 Sum_probs=55.5
Q ss_pred cCCCcEEEEecCCccccccc-cc-cccc---ccCCCC----------ChhhHHHHHHHHHHcCCeEEEEccchhhH-HHH
Q 001552 849 KWNTRIVISDVDGTITKSDV-LG-QFMP---LVGVDW----------SQTGVAHLFSAIKENGYQLLFLSARAIVQ-AYH 912 (1055)
Q Consensus 849 ~~~dKIVISDIDGTITKSDv-lG-hIlP---~LGkDW----------TH~GVAkLYskI~~NGYkILYLSARpIgq-Ad~ 912 (1055)
+-..++||.|||-||...-. -| ++.. .-.++| +-||+.+|.+-...||-+|+|+|-|.-.. .+.
T Consensus 76 k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~ 155 (274)
T COG2503 76 KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDG 155 (274)
T ss_pred cCCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHhcCcEEEEEeccchhcccch
Confidence 34556899999999986543 23 3332 224455 46899999999999999999999998766 888
Q ss_pred HHHHHHhcccCCcCCC
Q 001552 913 TRRFLFTLKQDGKALP 928 (1055)
Q Consensus 913 TR~yL~~i~Q~g~~LP 928 (1055)
|.+=|. ..+||
T Consensus 156 T~~nLk-----~~g~~ 166 (274)
T COG2503 156 TIENLK-----SEGLP 166 (274)
T ss_pred hHHHHH-----HcCcc
Confidence 888775 34566
No 118
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=86.37 E-value=1.2 Score=54.06 Aligned_cols=59 Identities=17% Similarity=0.278 Sum_probs=42.7
Q ss_pred CCcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHc-CCeEEEEccchhhHHHHHHHHHH
Q 001552 851 NTRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKEN-GYQLLFLSARAIVQAYHTRRFLF 918 (1055)
Q Consensus 851 ~dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~N-GYkILYLSARpIgqAd~TR~yL~ 918 (1055)
..+++++|+||||+..+.. | ...-+++.+.+..+++.+. |+.++.+|+|+... .+.|+.
T Consensus 491 ~~rLi~~D~DGTL~~~~~~----~--~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~---l~~~~~ 550 (726)
T PRK14501 491 SRRLLLLDYDGTLVPFAPD----P--ELAVPDKELRDLLRRLAADPNTDVAIISGRDRDT---LERWFG 550 (726)
T ss_pred cceEEEEecCccccCCCCC----c--ccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHH---HHHHhC
Confidence 4689999999999963211 1 1123468899999999995 99999999998543 345553
No 119
>cd03016 PRX_1cys Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine. They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by reducing and detoxifying hydrogen peroxide, peroxynitrite, and organic hydroperoxides. As with all other PRXs, a cysteine sulfenic acid intermediate is formed upon reaction of 1-cys PRX with its substrates. Having no resolving cysteine, the oxidized enzyme is resolved by an external small-molecule or protein reductant such as thioredoxin or glutaredoxin. Similar to typical 2-cys PRX, 1-cys PRX forms a functional dimeric unit with a B-type interface, as well as a decameric structure which is stabilized in the reduced form of the enzyme. Other oligomeric forms, tetramers and hexamers, have also been reported. Mammalian 1-cys PRX is localized cellularly in the cytosol and is expressed at high levels in brain, eye, testes an
Probab=85.82 E-value=5 Score=41.58 Aligned_cols=79 Identities=22% Similarity=0.355 Sum_probs=50.4
Q ss_pred EEEecCCccccccccc-c--cccccCCCCC------hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccC-C
Q 001552 855 VISDVDGTITKSDVLG-Q--FMPLVGVDWS------QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQD-G 924 (1055)
Q Consensus 855 VISDIDGTITKSDvlG-h--IlP~LGkDWT------H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~-g 924 (1055)
.+-|.+|+++.+|..| . ++=..-.+|+ .+..+++|..+++.|.+|+-||.-+. ...++|+..+++. +
T Consensus 9 ~~~~~~g~~~l~d~~g~k~vvlf~~pa~~cp~C~~el~~l~~~~~~f~~~gv~vigvS~D~~---~~~~~~~~~i~~~~~ 85 (203)
T cd03016 9 EADTTHGPIKFHDYLGDSWGILFSHPADFTPVCTTELGAFAKLAPEFKKRNVKLIGLSVDSV---ESHIKWIEDIEEYTG 85 (203)
T ss_pred EEecCCCcEeHHHHcCCCEEEEEEecCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEECCCH---HHHHHHHhhHHHhcC
Confidence 3446677777777777 3 1212344554 56778899999999999999997653 3455576655432 2
Q ss_pred cCCCCCceecCCC
Q 001552 925 KALPDGPVVISPD 937 (1055)
Q Consensus 925 ~~LP~GPVLLSPd 937 (1055)
.++| -|++.-++
T Consensus 86 ~~~~-fpil~D~~ 97 (203)
T cd03016 86 VEIP-FPIIADPD 97 (203)
T ss_pred CCCc-eeEEECch
Confidence 3454 56766554
No 120
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=85.72 E-value=1.5 Score=46.15 Aligned_cols=50 Identities=16% Similarity=0.244 Sum_probs=35.5
Q ss_pred CcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHc-CCeEEEEccchh
Q 001552 852 TRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKEN-GYQLLFLSARAI 907 (1055)
Q Consensus 852 dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~N-GYkILYLSARpI 907 (1055)
.+++++|+||||+... +.-....+.+++.++...|.+. +..+..+|+|++
T Consensus 3 ~~~l~lD~DGTL~~~~------~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~ 53 (244)
T TIGR00685 3 KRAFFFDYDGTLSEIV------PDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKF 53 (244)
T ss_pred cEEEEEecCccccCCc------CCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCCh
Confidence 4679999999999621 1111223468899999888776 466778999965
No 121
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=84.75 E-value=1 Score=48.21 Aligned_cols=37 Identities=14% Similarity=0.151 Sum_probs=27.2
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcc
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLK 921 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~ 921 (1055)
.||.-++|..|++++-+|+-+|| ||--..+..|.++.
T Consensus 75 dp~fKef~e~ike~di~fiVvSs---Gm~~fI~~lfe~iv 111 (220)
T COG4359 75 DPGFKEFVEWIKEHDIPFIVVSS---GMDPFIYPLFEGIV 111 (220)
T ss_pred CccHHHHHHHHHHcCCCEEEEeC---CCchHHHHHHHhhc
Confidence 47777777788888888888887 55666666666553
No 122
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=83.48 E-value=1.9 Score=41.49 Aligned_cols=16 Identities=19% Similarity=0.484 Sum_probs=13.5
Q ss_pred EEEEecCCcccccccc
Q 001552 854 IVISDVDGTITKSDVL 869 (1055)
Q Consensus 854 IVISDIDGTITKSDvl 869 (1055)
+||||+||||..++..
T Consensus 1 ~vlFDlDgtLv~~~~~ 16 (183)
T TIGR01509 1 AILFDLDGVLVDTSSA 16 (183)
T ss_pred CeeeccCCceechHHH
Confidence 4899999999998653
No 123
>PLN03017 trehalose-phosphatase
Probab=83.26 E-value=2.1 Score=49.25 Aligned_cols=54 Identities=15% Similarity=0.306 Sum_probs=40.3
Q ss_pred CCCcEEEEecCCcccccccccccccccC---CCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHH
Q 001552 850 WNTRIVISDVDGTITKSDVLGQFMPLVG---VDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHT 913 (1055)
Q Consensus 850 ~~dKIVISDIDGTITKSDvlGhIlP~LG---kDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~T 913 (1055)
....+|++|+||||+- .+. .....+...+...+++ +|+++.-+|+|++......
T Consensus 109 ~k~~llflD~DGTL~P---------iv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~ 165 (366)
T PLN03017 109 GKQIVMFLDYDGTLSP---------IVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNF 165 (366)
T ss_pred CCCeEEEEecCCcCcC---------CcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHh
Confidence 3456788999999991 111 1134588888999999 8899999999998765544
No 124
>PF00578 AhpC-TSA: AhpC/TSA family; InterPro: IPR000866 Peroxiredoxins (Prxs) are a ubiquitous family of antioxidant enzymes that also control cytokine-induced peroxide levels which mediate signal transduction in mammalian cells. Prxs can be regulated by changes to phosphorylation, redox and possibly oligomerisation states. Prxs are divided into three classes: typical 2-Cys Prxs; atypical 2-Cys Prxs; and 1-Cys Prxs. All Prxs share the same basic catalytic mechanism, in which an active-site cysteine (the peroxidatic cysteine) is oxidised to a sulphenic acid by the peroxide substrate. The recycling of the sulphenic acid back to a thiol is what distinguishes the three enzyme classes. Using crystal structures, a detailed catalytic cycle has been derived for typical 2-Cys Prxs, including a model for the redox-regulated oligomeric state proposed to control enzyme activity []. Alkyl hydroperoxide reductase (AhpC) is responsible for directly reducing organic hyperoxides in its reduced dithiol form. Thiol specific antioxidant (TSA) is a physiologically important antioxidant which constitutes an enzymatic defence against sulphur-containing radicals. This family contains AhpC and TSA, as well as related proteins.; GO: 0016209 antioxidant activity, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1QMV_A 1PRX_B 3HJP_C 3HA9_A 2V41_G 2V32_C 2V2G_C 3LWA_A 3IA1_B 1ZYE_G ....
Probab=82.15 E-value=6.5 Score=35.87 Aligned_cols=74 Identities=26% Similarity=0.440 Sum_probs=49.6
Q ss_pred EEEecCC-cccccccccc--cccccCCCCC------hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCc
Q 001552 855 VISDVDG-TITKSDVLGQ--FMPLVGVDWS------QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGK 925 (1055)
Q Consensus 855 VISDIDG-TITKSDvlGh--IlP~LGkDWT------H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~ 925 (1055)
..-|+|| +++.++..|. ++-.....|. .+...++|.+++++|++|+-+|.-+.. .++.|++. +
T Consensus 9 ~l~~~~g~~~~l~~l~gk~~vl~f~~~~~c~~c~~~l~~l~~~~~~~~~~~~~vi~is~d~~~---~~~~~~~~-----~ 80 (124)
T PF00578_consen 9 TLTDSDGKTVSLSDLKGKPVVLFFWPTAWCPFCQAELPELNELYKKYKDKGVQVIGISTDDPE---EIKQFLEE-----Y 80 (124)
T ss_dssp EEETTTSEEEEGGGGTTSEEEEEEESTTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESSSHH---HHHHHHHH-----H
T ss_pred EeECCCCCEEEHHHHCCCcEEEEEeCccCccccccchhHHHHHhhhhccceEEeeeccccccc---chhhhhhh-----h
Confidence 4457885 7788888773 2223344465 366778899999999999999996555 67778752 2
Q ss_pred CCCCCceecCCC
Q 001552 926 ALPDGPVVISPD 937 (1055)
Q Consensus 926 ~LP~GPVLLSPd 937 (1055)
+ .+-|++.-++
T Consensus 81 ~-~~~~~~~D~~ 91 (124)
T PF00578_consen 81 G-LPFPVLSDPD 91 (124)
T ss_dssp T-CSSEEEEETT
T ss_pred c-cccccccCcc
Confidence 2 3456666543
No 125
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=81.67 E-value=5.3 Score=40.81 Aligned_cols=100 Identities=13% Similarity=0.132 Sum_probs=55.8
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCchHHHHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFKIACLE 961 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL~ 961 (1055)
.|||.++...++++||++.-+|+..... ++.+|+... -..+.. .++.+.+ .. ...++|+.|...| +
T Consensus 94 ~~g~~~~l~~l~~~g~~~~i~S~~~~~~---~~~~l~~~~--l~~~f~-~~~~~~~-~~------~~Kp~~~~~~~~~-~ 159 (222)
T PRK10826 94 LPGVREALALCKAQGLKIGLASASPLHM---LEAVLTMFD--LRDYFD-ALASAEK-LP------YSKPHPEVYLNCA-A 159 (222)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCcHHH---HHHHHHhCc--chhccc-EEEEccc-CC------CCCCCHHHHHHHH-H
Confidence 5788888889999999999999965443 333443110 011221 2222211 10 1233445554433 1
Q ss_pred HHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCCCcEEEEC
Q 001552 962 DIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPRGKIFIIN 1002 (1055)
Q Consensus 962 dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~sRIFiIN 1002 (1055)
.+ .+-|. ..+ .+|++.+|+.+-+++|++. |++-+
T Consensus 160 ~~-~~~~~--~~~--~igDs~~Di~aA~~aG~~~--i~v~~ 193 (222)
T PRK10826 160 KL-GVDPL--TCV--ALEDSFNGMIAAKAARMRS--IVVPA 193 (222)
T ss_pred Hc-CCCHH--HeE--EEcCChhhHHHHHHcCCEE--EEecC
Confidence 11 22111 233 4899999999999999964 55443
No 126
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=81.03 E-value=4.1 Score=43.72 Aligned_cols=125 Identities=20% Similarity=0.297 Sum_probs=76.9
Q ss_pred CCcEEEEecCCccccccc---ccc--ccc-------------ccCCCCChhhH-----HHHHHHHHHcCCeEEEEccchh
Q 001552 851 NTRIVISDVDGTITKSDV---LGQ--FMP-------------LVGVDWSQTGV-----AHLFSAIKENGYQLLFLSARAI 907 (1055)
Q Consensus 851 ~dKIVISDIDGTITKSDv---lGh--IlP-------------~LGkDWTH~GV-----AkLYskI~~NGYkILYLSARpI 907 (1055)
-+-.|-||||.|+.-|-- .|+ +.| .+...|-.-.| .+|-.+=.+.|-+|+|+|+|.-
T Consensus 62 ~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt~ 141 (237)
T COG3700 62 PPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIYFVTGRTP 141 (237)
T ss_pred CCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcCCeEEEEecCCC
Confidence 345689999999986642 121 333 23444543333 3455566788999999999988
Q ss_pred hHHHHHHHHHHhcccCCcCC-CCCceecCCCCCCccchhhhhccCchH-HHHHHHHHHHhhCCCCCCCEEEccCCCchhH
Q 001552 908 VQAYHTRRFLFTLKQDGKAL-PDGPVVISPDGLFPSLFREVIRRAPHE-FKIACLEDIKALFPSDCNPFYAGFGNRDTDE 985 (1055)
Q Consensus 908 gqAd~TR~yL~~i~Q~g~~L-P~GPVLLSPd~Lf~AL~REVI~KkPee-FKIacL~dIk~LFP~~~nPFyAGFGNR~TDv 985 (1055)
+-.+.+-.-|. +...+ -+-||.+.-|+ .+|.. -|..+|. .- ..-++ ||+.++|+
T Consensus 142 gk~d~vsk~La----k~F~i~~m~pv~f~Gdk-----------~k~~qy~Kt~~i~---~~----~~~Ih--YGDSD~Di 197 (237)
T COG3700 142 GKTDTVSKTLA----KNFHITNMNPVIFAGDK-----------PKPGQYTKTQWIQ---DK----NIRIH--YGDSDNDI 197 (237)
T ss_pred CcccccchhHH----hhcccCCCcceeeccCC-----------CCcccccccHHHH---hc----CceEE--ecCCchhh
Confidence 87776666664 22222 22344443321 13443 3555544 22 12333 89999999
Q ss_pred HHHHhcCCCCCcEE
Q 001552 986 ISYLKVGIPRGKIF 999 (1055)
Q Consensus 986 ~AYraVGIP~sRIF 999 (1055)
.|-+.+|+-.=||.
T Consensus 198 ~AAkeaG~RgIRil 211 (237)
T COG3700 198 TAAKEAGARGIRIL 211 (237)
T ss_pred hHHHhcCccceeEE
Confidence 99999999888874
No 127
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=80.42 E-value=4.5 Score=37.80 Aligned_cols=95 Identities=23% Similarity=0.321 Sum_probs=56.2
Q ss_pred CChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCch--HHHH
Q 001552 880 WSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPH--EFKI 957 (1055)
Q Consensus 880 WTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPe--eFKI 957 (1055)
...+|+.++.+.++++||++.-+|..+-. ..+..|..+.- ..+++ -++.+. +.-..+|+ .|+.
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~---~~~~~l~~~~~--~~~f~-~i~~~~---------~~~~~Kp~~~~~~~ 141 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRE---RIERVLERLGL--DDYFD-EIISSD---------DVGSRKPDPDAYRR 141 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHH---HHHHHHHHTTH--GGGCS-EEEEGG---------GSSSSTTSHHHHHH
T ss_pred chhhhhhhhhhhcccccceeEEeecCCcc---ccccccccccc--ccccc-cccccc---------hhhhhhhHHHHHHH
Confidence 35789999999999999999999999744 34444432211 12333 222221 12223453 4443
Q ss_pred HHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCC
Q 001552 958 ACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPR 995 (1055)
Q Consensus 958 acL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~ 995 (1055)
.+ +.+ .+ ++ ...+ -+|++..|+.+=+++|+..
T Consensus 142 ~~-~~~-~~-~p-~~~~--~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 142 AL-EKL-GI-PP-EEIL--FVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp HH-HHH-TS-SG-GGEE--EEESSHHHHHHHHHTTSEE
T ss_pred HH-HHc-CC-Cc-ceEE--EEeCCHHHHHHHHHcCCeE
Confidence 32 222 22 22 1233 4899999999999999864
No 128
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=80.06 E-value=4.4 Score=44.67 Aligned_cols=55 Identities=18% Similarity=0.407 Sum_probs=41.1
Q ss_pred CCcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHH
Q 001552 851 NTRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFL 917 (1055)
Q Consensus 851 ~dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL 917 (1055)
..++|-.|||||+.. -|.+| .-++..|..+++.||+|+.+|+...--.-..++-|
T Consensus 6 ~~~lIFtDlD~TLl~----------~~ye~--~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l 60 (274)
T COG3769 6 MPLLIFTDLDGTLLP----------HSYEW--QPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSL 60 (274)
T ss_pred cceEEEEcccCcccC----------CCCCC--CccchHHHHHHHcCCeEEEeccchHHHHHHHHHhc
Confidence 356788899999975 23466 45677899999999999999998765544444444
No 129
>PRK13190 putative peroxiredoxin; Provisional
Probab=79.17 E-value=11 Score=39.33 Aligned_cols=76 Identities=24% Similarity=0.378 Sum_probs=46.2
Q ss_pred ecCCccccccccccc--ccccCCCCC------hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccC-CcCCC
Q 001552 858 DVDGTITKSDVLGQF--MPLVGVDWS------QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQD-GKALP 928 (1055)
Q Consensus 858 DIDGTITKSDvlGhI--lP~LGkDWT------H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~-g~~LP 928 (1055)
|.+|+++.++..|.. +-..-.+|+ .+..+++|.+++++|.+++-+|.-.. ..-++|++.+.+. +..+|
T Consensus 15 ~~~g~v~l~d~~gk~vvL~~~p~~~cp~C~~El~~l~~~~~~f~~~~~~vi~vS~D~~---~~~~~w~~~~~~~~g~~~~ 91 (202)
T PRK13190 15 TTKGPIDLSKYKGKWVLLFSHPADFTPVCTTEFIAFSRRYEDFKKLGVELVGLSVDSI---YSHIAWLRDIEERFGIKIP 91 (202)
T ss_pred cCCCcEeHHHhCCCEEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCH---HHHHHHHHhHHHhcCCCce
Confidence 456777777766641 111233554 56778889999999999999997643 2234566544332 22233
Q ss_pred CCceecCCC
Q 001552 929 DGPVVISPD 937 (1055)
Q Consensus 929 ~GPVLLSPd 937 (1055)
-|++.-++
T Consensus 92 -fPll~D~~ 99 (202)
T PRK13190 92 -FPVIADID 99 (202)
T ss_pred -EEEEECCC
Confidence 46776654
No 130
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=78.99 E-value=2.5 Score=44.82 Aligned_cols=70 Identities=20% Similarity=0.241 Sum_probs=44.8
Q ss_pred CeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCchHHHHHHHHHHHhhCCCCCCCEEE
Q 001552 897 YQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKALFPSDCNPFYA 976 (1055)
Q Consensus 897 YkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~LFP~~~nPFyA 976 (1055)
.+++|+|||.--+...|..||. ...+| -++++ ++.. ..|+.|.+...--| +|-
T Consensus 88 ~~L~~itar~~dl~~iT~~~l~-----~q~ih-------~~~l~------i~g~---h~KV~~vrth~idl-----f~e- 140 (194)
T COG5663 88 HRLIYITARKADLTRITYAWLF-----IQNIH-------YDHLE------IVGL---HHKVEAVRTHNIDL-----FFE- 140 (194)
T ss_pred ceeeeeehhhHHHHHHHHHHHH-----Hhccc-------hhhhh------hhcc---cccchhhHhhccCc-----ccc-
Confidence 8999999999999999999996 34677 33332 2222 22688877654322 121
Q ss_pred ccCCCchhHHHHHhcCCCC
Q 001552 977 GFGNRDTDEISYLKVGIPR 995 (1055)
Q Consensus 977 GFGNR~TDv~AYraVGIP~ 995 (1055)
++-++=..+=+.+|+|.
T Consensus 141 --d~~~na~~iAk~~~~~v 157 (194)
T COG5663 141 --DSHDNAGQIAKNAGIPV 157 (194)
T ss_pred --ccCchHHHHHHhcCCcE
Confidence 33344456666688864
No 131
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=78.94 E-value=11 Score=41.90 Aligned_cols=130 Identities=17% Similarity=0.157 Sum_probs=69.0
Q ss_pred ChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCcee-----cCCCCCCccchhhhhccCchHH
Q 001552 881 SQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVV-----ISPDGLFPSLFREVIRRAPHEF 955 (1055)
Q Consensus 881 TH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVL-----LSPd~Lf~AL~REVI~KkPeeF 955 (1055)
..||+.+|+..++++|+++.-+||-.. ..++..|+.. +..-|.-+++ .+.++.+..+.-.++.. .-
T Consensus 122 l~pG~~efl~~L~~~GIpv~IvS~G~~---~~Ie~vL~~l---gl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~---~~ 192 (277)
T TIGR01544 122 LKDGYENFFDKLQQHSIPVFIFSAGIG---NVLEEVLRQA---GVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHT---FN 192 (277)
T ss_pred cCcCHHHHHHHHHHCCCcEEEEeCCcH---HHHHHHHHHc---CCCCcCceEEeeeEEECCCCeEeCCCCCcccc---cc
Confidence 469999999999999999999998554 4445555421 2111333441 22333332221111100 12
Q ss_pred HHHH-HHHHHhhCC--CCCCCEEEccCCCchhHHHHHhcCCCC-CcEEEECCCCceeeecccCCcchhhHHhhh
Q 001552 956 KIAC-LEDIKALFP--SDCNPFYAGFGNRDTDEISYLKVGIPR-GKIFIINPKGEVVVNHRVDSKTYSSIHALV 1025 (1055)
Q Consensus 956 KIac-L~dIk~LFP--~~~nPFyAGFGNR~TDv~AYraVGIP~-sRIFiINpkGel~~e~~~~~sSY~~L~dlV 1025 (1055)
|.+. +...+..|. ......+ .+|+..+|+.| +-|+|. +.|..|+ =|..........|....|+|
T Consensus 193 K~~~v~~~~~~~~~~~~~~~~vI-~vGDs~~Dl~m--a~g~~~~~~~l~ig---fln~~~e~~l~~y~~~~Div 260 (277)
T TIGR01544 193 KNHDVALRNTEYFNQLKDRSNII-LLGDSQGDLRM--ADGVANVEHILKIG---YLNDRVDELLEKYMDSYDIV 260 (277)
T ss_pred cHHHHHHHHHHHhCccCCcceEE-EECcChhhhhH--hcCCCcccceEEEE---ecccCHHHHHHHHHHhCCEE
Confidence 4433 223444443 1122233 69999999998 778865 5665552 11111111136677777766
No 132
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=78.83 E-value=6.4 Score=40.85 Aligned_cols=130 Identities=19% Similarity=0.144 Sum_probs=65.4
Q ss_pred CCcEEEEecCCccccccccccccc-------------ccCCCC-ChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHH
Q 001552 851 NTRIVISDVDGTITKSDVLGQFMP-------------LVGVDW-SQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRF 916 (1055)
Q Consensus 851 ~dKIVISDIDGTITKSDvlGhIlP-------------~LGkDW-TH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~y 916 (1055)
.+|+||||.|+|+.---.--|+.| .-|..- -+|+|....+.|+.+|++|-..|.-+.. +..|+.
T Consensus 2 ~PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P--~~A~~~ 79 (169)
T PF12689_consen 2 LPKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEP--DWAREL 79 (169)
T ss_dssp S-SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-H--HHHHHH
T ss_pred CCcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCCh--HHHHHH
Confidence 468999999999985433333332 234433 3899999999999999999999842221 555666
Q ss_pred HHhcccCCcCCC--CCceecCCCCCCccchhhhhccCchHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCC
Q 001552 917 LFTLKQDGKALP--DGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIP 994 (1055)
Q Consensus 917 L~~i~Q~g~~LP--~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP 994 (1055)
|.- ..++ .|+..... .+|.. -| |.+. =|+.-++.|+..-.-.+.-+. -|+|...-+..=+++||.
T Consensus 80 L~~-----l~i~~~~~~~~~~~-~~F~~--~e-I~~g---sK~~Hf~~i~~~tgI~y~eMl-FFDDe~~N~~~v~~lGV~ 146 (169)
T PF12689_consen 80 LKL-----LEIDDADGDGVPLI-EYFDY--LE-IYPG---SKTTHFRRIHRKTGIPYEEML-FFDDESRNIEVVSKLGVT 146 (169)
T ss_dssp HHH-----TT-C-----------CCECE--EE-ESSS----HHHHHHHHHHHH---GGGEE-EEES-HHHHHHHHTTT-E
T ss_pred HHh-----cCCCccccccccch-hhcch--hh-eecC---chHHHHHHHHHhcCCChhHEE-EecCchhcceeeEecCcE
Confidence 642 2333 22222222 23322 23 2222 366666666654333333333 489988888887778875
Q ss_pred C
Q 001552 995 R 995 (1055)
Q Consensus 995 ~ 995 (1055)
+
T Consensus 147 ~ 147 (169)
T PF12689_consen 147 C 147 (169)
T ss_dssp E
T ss_pred E
Confidence 5
No 133
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=76.77 E-value=3 Score=42.02 Aligned_cols=15 Identities=20% Similarity=0.483 Sum_probs=13.6
Q ss_pred cEEEEecCCcccccc
Q 001552 853 RIVISDVDGTITKSD 867 (1055)
Q Consensus 853 KIVISDIDGTITKSD 867 (1055)
++||||+||||..+.
T Consensus 3 ~~viFDlDGTL~ds~ 17 (221)
T TIGR02253 3 KAIFFDLDDTLIDTS 17 (221)
T ss_pred eEEEEeCCCCCcCCC
Confidence 689999999999875
No 134
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=76.45 E-value=7.6 Score=42.18 Aligned_cols=121 Identities=17% Similarity=0.237 Sum_probs=80.5
Q ss_pred ChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCC-----CceecCCCCCCccchhhhhccCch-H
Q 001552 881 SQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPD-----GPVVISPDGLFPSLFREVIRRAPH-E 954 (1055)
Q Consensus 881 TH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~-----GPVLLSPd~Lf~AL~REVI~KkPe-e 954 (1055)
--|||-+|.+.|+++|-++.-+|+-=..++...++-| +||. --+++..++-|..| .+.....+ .
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~L--------gi~~~n~yAN~l~fd~~Gk~~gf--d~~~ptsdsg 158 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQL--------GIPKSNIYANELLFDKDGKYLGF--DTNEPTSDSG 158 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHh--------CCcHhhhhhheeeeccCCccccc--ccCCccccCC
Confidence 3799999999999999999999999888888888877 3554 33445555544332 22233333 4
Q ss_pred HHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCCCcEEEECCCCceeeecccC-Ccchhh
Q 001552 955 FKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPRGKIFIINPKGEVVVNHRVD-SKTYSS 1020 (1055)
Q Consensus 955 FKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~sRIFiINpkGel~~e~~~~-~sSY~~ 1020 (1055)
-|-+.|..|+.-++- .-....|+..||..|- |+..-| |..-|.++.+..+. .++|..
T Consensus 159 gKa~~i~~lrk~~~~---~~~~mvGDGatDlea~-----~pa~af-i~~~g~~~r~~vk~nak~~~~ 216 (227)
T KOG1615|consen 159 GKAEVIALLRKNYNY---KTIVMVGDGATDLEAM-----PPADAF-IGFGGNVIREGVKANAKWYVT 216 (227)
T ss_pred ccHHHHHHHHhCCCh---heeEEecCCccccccC-----Cchhhh-hccCCceEcHhhHhccHHHHH
Confidence 588889999986543 2345789999999874 554444 45556665543322 356643
No 135
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=75.79 E-value=14 Score=44.14 Aligned_cols=101 Identities=19% Similarity=0.246 Sum_probs=67.7
Q ss_pred EEEEecCCcccccccccccccccC-CCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCce
Q 001552 854 IVISDVDGTITKSDVLGQFMPLVG-VDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPV 932 (1055)
Q Consensus 854 IVISDIDGTITKSDvlGhIlP~LG-kDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPV 932 (1055)
+|..+.||++.. .++ +|-..||+.++.+.++++||++.-+|+..-..+...-+.| +++ +
T Consensus 387 ~~~~~~~~~~~g---------~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~l--------gi~---~ 446 (562)
T TIGR01511 387 SVLVAVNGELAG---------VFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKEL--------GIN---V 446 (562)
T ss_pred EEEEEECCEEEE---------EEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHc--------CCc---E
Confidence 344566776653 111 3556799999999999999999999999876555555444 332 1
Q ss_pred ecCCCCCCccchhhhhccCchHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCC
Q 001552 933 VISPDGLFPSLFREVIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIP 994 (1055)
Q Consensus 933 LLSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP 994 (1055)
|. ++ .| +=|.+.++.++.. . .-.+.+|+..+|+.|-+++||.
T Consensus 447 -------~~----~~---~p-~~K~~~v~~l~~~----~-~~v~~VGDg~nD~~al~~A~vg 488 (562)
T TIGR01511 447 -------RA----EV---LP-DDKAALIKELQEK----G-RVVAMVGDGINDAPALAQADVG 488 (562)
T ss_pred -------Ec----cC---Ch-HHHHHHHHHHHHc----C-CEEEEEeCCCccHHHHhhCCEE
Confidence 11 11 12 2366777777652 1 2244699999999999999974
No 136
>PLN02151 trehalose-phosphatase
Probab=75.38 E-value=5.3 Score=45.88 Aligned_cols=55 Identities=11% Similarity=0.169 Sum_probs=40.0
Q ss_pred cCCCcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHH
Q 001552 849 KWNTRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQA 910 (1055)
Q Consensus 849 ~~~dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqA 910 (1055)
.....++++|+||||+- |-+.-..-..+++.......|+ +++++..+|+|+....
T Consensus 95 ~~~~~ll~lDyDGTL~P------Iv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l 149 (354)
T PLN02151 95 EGKQIVMFLDYDGTLSP------IVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKV 149 (354)
T ss_pred cCCceEEEEecCccCCC------CCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHH
Confidence 34456789999999992 1122222345789999999998 5689999999987644
No 137
>PRK13599 putative peroxiredoxin; Provisional
Probab=75.31 E-value=21 Score=37.92 Aligned_cols=104 Identities=19% Similarity=0.255 Sum_probs=60.7
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccC-CcCCCCCceecCCCCCCccchhhhhccCchHHHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQD-GKALPDGPVVISPDGLFPSLFREVIRRAPHEFKIACL 960 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~-g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL 960 (1055)
.+..+++|.++.+.|.+++-||.-..- ..+.|...+++. ++.+| =|++..+++
T Consensus 48 l~~l~~~~~~f~~~gv~vigIS~D~~~---~~~~w~~~i~~~~~~~i~-fPil~D~~~---------------------- 101 (215)
T PRK13599 48 FVEFARKANDFKELNTELIGLSVDQVF---SHIKWVEWIKDNTNIAIP-FPVIADDLG---------------------- 101 (215)
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCHH---HHHHHHHhHHHhcCCCCc-eeEEECCCc----------------------
Confidence 578889999999999999999976542 334454444432 34454 456665543
Q ss_pred HHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCCCcEEEECCCCceeeeccc---CCcchhhHHhhhccc
Q 001552 961 EDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPRGKIFIINPKGEVVVNHRV---DSKTYSSIHALVHGM 1028 (1055)
Q Consensus 961 ~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~sRIFiINpkGel~~e~~~---~~sSY~~L~dlVD~~ 1028 (1055)
.+...|.-. .+ +.| +.+.--+|+||++|.|+..... ....+..+-+.++.+
T Consensus 102 -~va~~yg~~-~~---~~~------------~~~~R~tfIID~dG~Ir~~~~~p~~~gr~~~eilr~l~~l 155 (215)
T PRK13599 102 -KVSNQLGMI-HP---GKG------------TNTVRAVFIVDDKGTIRLIMYYPQEVGRNVDEILRALKAL 155 (215)
T ss_pred -hHHHHcCCC-cc---CCC------------CceeeEEEEECCCCEEEEEEEcCCCCCCCHHHHHHHHHHh
Confidence 112222110 00 001 0145678999999999854321 124566666666653
No 138
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=75.14 E-value=11 Score=37.86 Aligned_cols=94 Identities=22% Similarity=0.190 Sum_probs=54.6
Q ss_pred ChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCch--HHHHH
Q 001552 881 SQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPH--EFKIA 958 (1055)
Q Consensus 881 TH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPe--eFKIa 958 (1055)
..+|+.++.+.++++||++.-+|+.....+...-..+. + ..+.+ -++.+. . +..++|+ .|+.+
T Consensus 76 ~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~-l----~~~f~-~i~~~~-~--------~~~~KP~~~~~~~~ 140 (205)
T TIGR01454 76 VFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALG-L----LPLFD-HVIGSD-E--------VPRPKPAPDIVREA 140 (205)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcC-C----hhhee-eEEecC-c--------CCCCCCChHHHHHH
Confidence 35899999999999999999999976554443323221 0 01111 122222 1 1123443 44332
Q ss_pred HHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCC
Q 001552 959 CLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPR 995 (1055)
Q Consensus 959 cL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~ 995 (1055)
+ +.+ .+-| ...+| +|++.+|+.+=+++|++.
T Consensus 141 ~-~~~-~~~~--~~~l~--igD~~~Di~aA~~~Gi~~ 171 (205)
T TIGR01454 141 L-RLL-DVPP--EDAVM--VGDAVTDLASARAAGTAT 171 (205)
T ss_pred H-HHc-CCCh--hheEE--EcCCHHHHHHHHHcCCeE
Confidence 2 221 1111 22344 899999999999999974
No 139
>TIGR02540 gpx7 putative glutathione peroxidase Gpx7. This model represents one of several families of known and probable glutathione peroxidases. This family is restricted to animals and designated GPX7.
Probab=75.13 E-value=11 Score=36.76 Aligned_cols=62 Identities=11% Similarity=0.155 Sum_probs=40.0
Q ss_pred EecCC-cccccccccccc-cccCCCCC------hhhHHHHHHHHHHcCCeEEEEccchh-----hHHHHHHHHHH
Q 001552 857 SDVDG-TITKSDVLGQFM-PLVGVDWS------QTGVAHLFSAIKENGYQLLFLSARAI-----VQAYHTRRFLF 918 (1055)
Q Consensus 857 SDIDG-TITKSDvlGhIl-P~LGkDWT------H~GVAkLYskI~~NGYkILYLSARpI-----gqAd~TR~yL~ 918 (1055)
-|.|| |++.++..|+.. =..-..|. .+...++|.++.++|..|+-+++... .-....+.|++
T Consensus 8 ~~~~G~~~~l~~~~Gk~vvv~~~as~C~~c~~~~~~l~~l~~~~~~~~~~v~~i~~~~~~~~~~d~~~~~~~f~~ 82 (153)
T TIGR02540 8 KDARGRTVSLEKYRGKVSLVVNVASECGFTDQNYRALQELHRELGPSHFNVLAFPCNQFGESEPDSSKEIESFAR 82 (153)
T ss_pred ECCCCCEecHHHhCCCEEEEEEeCCCCCchhhhHHHHHHHHHHHhhCCeEEEEEeccccccCCCCCHHHHHHHHH
Confidence 46777 777788888631 12233443 34566899999999999999986322 11345677774
No 140
>PRK11590 hypothetical protein; Provisional
Probab=74.45 E-value=1.6 Score=44.88 Aligned_cols=19 Identities=37% Similarity=0.753 Sum_probs=15.3
Q ss_pred CCcEEEEecCCcccccccc
Q 001552 851 NTRIVISDVDGTITKSDVL 869 (1055)
Q Consensus 851 ~dKIVISDIDGTITKSDvl 869 (1055)
.-|+||||.|||||..|..
T Consensus 5 ~~k~~iFD~DGTL~~~d~~ 23 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQDMF 23 (211)
T ss_pred cceEEEEecCCCCcccchH
Confidence 3578999999999976643
No 141
>cd03015 PRX_Typ2cys Peroxiredoxin (PRX) family, Typical 2-Cys PRX subfamily; PRXs are thiol-specific antioxidant (TSA) proteins, which confer a protective role in cells through its peroxidase activity by reducing hydrogen peroxide, peroxynitrite, and organic hydroperoxides. The functional unit of typical 2-cys PRX is a homodimer. A unique intermolecular redox-active disulfide center is utilized for its activity. Upon reaction with peroxides, its peroxidatic cysteine is oxidized into a sulfenic acid intermediate which is resolved by bonding with the resolving cysteine from the other subunit of the homodimer. This intermolecular disulfide bond is then reduced by thioredoxin, tryparedoxin or AhpF. Typical 2-cys PRXs, like 1-cys PRXs, form decamers which are stabilized by reduction of the active site cysteine. Typical 2-cys PRX interacts through beta strands at one edge of the monomer (B-type interface) to form the functional homodimer, and uses an A-type interface (similar to the dimeric
Probab=74.34 E-value=38 Score=33.90 Aligned_cols=131 Identities=15% Similarity=0.222 Sum_probs=71.8
Q ss_pred EEEEecCC-----ccccccccccc--ccccCCCCC------hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhc
Q 001552 854 IVISDVDG-----TITKSDVLGQF--MPLVGVDWS------QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTL 920 (1055)
Q Consensus 854 IVISDIDG-----TITKSDvlGhI--lP~LGkDWT------H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i 920 (1055)
..+.|++| +++.++..|+. +-.....|+ .+...++|.++++.|..|+-+|.-+. ...+.|+...
T Consensus 8 f~~~~~~g~~~~~~~~l~~~~Gk~vvl~F~~~~~c~~C~~~l~~l~~~~~~~~~~~v~vv~Is~d~~---~~~~~~~~~~ 84 (173)
T cd03015 8 FKATAVVPNGEFKEISLSDYKGKWVVLFFYPLDFTFVCPTEIIAFSDRYEEFKKLNAEVLGVSTDSH---FSHLAWRNTP 84 (173)
T ss_pred CEeecccCCCCceEEehHHhCCCEEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEecCCH---HHHHHHHHhh
Confidence 34456666 66667766642 111113342 45667889999999999999987543 2344666533
Q ss_pred ccC--CcCCCCCceecCCCCCCccchhhhhccCchHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCCCcE
Q 001552 921 KQD--GKALPDGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPRGKI 998 (1055)
Q Consensus 921 ~Q~--g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~sRI 998 (1055)
... ..++| -|++.-+++ .+...|.- ++. + .|++.-.+
T Consensus 85 ~~~~~~~~~~-f~~l~D~~~-----------------------~~~~~~gv----~~~-------~------~~~~~p~~ 123 (173)
T cd03015 85 RKEGGLGKIN-FPLLADPKK-----------------------KISRDYGV----LDE-------E------EGVALRGT 123 (173)
T ss_pred hhhCCccCcc-eeEEECCch-----------------------hHHHHhCC----ccc-------c------CCceeeEE
Confidence 211 12343 456654432 11112110 000 0 14444589
Q ss_pred EEECCCCceeeeccc---CCcchhhHHhhhccc
Q 001552 999 FIINPKGEVVVNHRV---DSKTYSSIHALVHGM 1028 (1055)
Q Consensus 999 FiINpkGel~~e~~~---~~sSY~~L~dlVD~~ 1028 (1055)
|+||++|.|+..... ....+..|-+.++.+
T Consensus 124 ~lID~~G~I~~~~~~~~~~~~~~~~il~~l~~~ 156 (173)
T cd03015 124 FIIDPEGIIRHITVNDLPVGRSVDETLRVLDAL 156 (173)
T ss_pred EEECCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 999999999855421 124566677777665
No 142
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=72.86 E-value=14 Score=39.04 Aligned_cols=93 Identities=18% Similarity=0.223 Sum_probs=55.6
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCch--HHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPH--EFKIAC 959 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPe--eFKIac 959 (1055)
.|||.++...++++||++.-+|+.+...+....+.+. + ..+.+ .++.+.+ +-..||+ .|..++
T Consensus 110 ~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~g-l----~~~Fd-~iv~~~~---------~~~~KP~p~~~~~a~ 174 (248)
T PLN02770 110 LNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLG-L----SDFFQ-AVIIGSE---------CEHAKPHPDPYLKAL 174 (248)
T ss_pred CccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcC-C----hhhCc-EEEecCc---------CCCCCCChHHHHHHH
Confidence 5688888899999999999999987665544333331 1 11111 2333321 1123454 444333
Q ss_pred HHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCC
Q 001552 960 LEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPR 995 (1055)
Q Consensus 960 L~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~ 995 (1055)
+.+ .+ .+ ...+| +|++..|+.|=+++|++.
T Consensus 175 -~~~-~~-~~-~~~l~--vgDs~~Di~aA~~aGi~~ 204 (248)
T PLN02770 175 -EVL-KV-SK-DHTFV--FEDSVSGIKAGVAAGMPV 204 (248)
T ss_pred -HHh-CC-Ch-hHEEE--EcCCHHHHHHHHHCCCEE
Confidence 222 11 11 22455 999999999999999974
No 143
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=72.16 E-value=25 Score=35.68 Aligned_cols=99 Identities=17% Similarity=0.105 Sum_probs=58.4
Q ss_pred ChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCchHHHHHHH
Q 001552 881 SQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFKIACL 960 (1055)
Q Consensus 881 TH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL 960 (1055)
..+|+.++...+++.||++.-+|+.........-.-+. +.. +.-++ .++.+.+. . + ..+.|+.|..++
T Consensus 88 l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~-l~~-~~~f~--~i~~~~~~-~----~--~KP~p~~~~~a~- 155 (220)
T TIGR03351 88 ALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLG-WTV-GDDVD--AVVCPSDV-A----A--GRPAPDLILRAM- 155 (220)
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhh-hhh-hccCC--EEEcCCcC-C----C--CCCCHHHHHHHH-
Confidence 45788999999999999999999987665554433331 110 02232 34444321 1 1 123445555432
Q ss_pred HHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCC
Q 001552 961 EDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPR 995 (1055)
Q Consensus 961 ~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~ 995 (1055)
+.+ .+=++ ...+| +|++.+|+.+=+++|++.
T Consensus 156 ~~~-~~~~~-~~~~~--igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 156 ELT-GVQDV-QSVAV--AGDTPNDLEAGINAGAGA 186 (220)
T ss_pred HHc-CCCCh-hHeEE--eCCCHHHHHHHHHCCCCe
Confidence 211 11011 23455 889999999999999984
No 144
>PTZ00056 glutathione peroxidase; Provisional
Probab=71.59 E-value=19 Score=37.53 Aligned_cols=64 Identities=14% Similarity=0.220 Sum_probs=42.1
Q ss_pred EEEecCC-ccccccccccccc-ccCCCCC------hhhHHHHHHHHHHcCCeEEEEccchh-----hHHHHHHHHHH
Q 001552 855 VISDVDG-TITKSDVLGQFMP-LVGVDWS------QTGVAHLFSAIKENGYQLLFLSARAI-----VQAYHTRRFLF 918 (1055)
Q Consensus 855 VISDIDG-TITKSDvlGhIlP-~LGkDWT------H~GVAkLYskI~~NGYkILYLSARpI-----gqAd~TR~yL~ 918 (1055)
-+-|+|| +++.++..|++.- .....|. .|...+||++++++|+.|+-++.... .-....+.|+.
T Consensus 23 ~l~d~~G~~vsL~~~kGkvvlv~fwAswC~~C~~e~p~L~~l~~~~~~~g~~vvgv~~~~~~~~e~d~~e~~~~f~~ 99 (199)
T PTZ00056 23 TVKTLEGTTVPMSSLKNKVLMITNSASKCGLTKKHVDQMNRLHSVFNPLGLEILAFPTSQFLNQEFPNTKDIRKFND 99 (199)
T ss_pred EEECCCCCEEeHHHhCCCEEEEEEECCCCCChHHHHHHHHHHHHHHhcCceEEEEecchhccCCCCCCHHHHHHHHH
Confidence 3456777 4666777675321 2233553 56778899999999999999986421 22466788885
No 145
>PRK11587 putative phosphatase; Provisional
Probab=71.10 E-value=16 Score=37.54 Aligned_cols=92 Identities=16% Similarity=0.252 Sum_probs=54.7
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCch--HHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPH--EFKIAC 959 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPe--eFKIac 959 (1055)
.||+.++...++++||++..+|+.+.... +..|. ..+...+. .+.+. .++..++|+ .|..++
T Consensus 85 ~pg~~e~L~~L~~~g~~~~ivTn~~~~~~---~~~l~---~~~l~~~~--~i~~~--------~~~~~~KP~p~~~~~~~ 148 (218)
T PRK11587 85 LPGAIALLNHLNKLGIPWAIVTSGSVPVA---SARHK---AAGLPAPE--VFVTA--------ERVKRGKPEPDAYLLGA 148 (218)
T ss_pred CcCHHHHHHHHHHcCCcEEEEcCCCchHH---HHHHH---hcCCCCcc--EEEEH--------HHhcCCCCCcHHHHHHH
Confidence 58899999999999999999999765433 33332 11222221 22221 122233454 554443
Q ss_pred HHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCC
Q 001552 960 LEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPR 995 (1055)
Q Consensus 960 L~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~ 995 (1055)
+.+ .+-|. ..+| +|++..|+.+=+++|+..
T Consensus 149 -~~~-g~~p~--~~l~--igDs~~di~aA~~aG~~~ 178 (218)
T PRK11587 149 -QLL-GLAPQ--ECVV--VEDAPAGVLSGLAAGCHV 178 (218)
T ss_pred -HHc-CCCcc--cEEE--EecchhhhHHHHHCCCEE
Confidence 211 22222 3454 899999999999999953
No 146
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=71.06 E-value=7.5 Score=49.02 Aligned_cols=57 Identities=16% Similarity=0.304 Sum_probs=41.8
Q ss_pred CCcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHH-HHcCCeEEEEccchhhHHHHHHHHHH
Q 001552 851 NTRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAI-KENGYQLLFLSARAIVQAYHTRRFLF 918 (1055)
Q Consensus 851 ~dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI-~~NGYkILYLSARpIgqAd~TR~yL~ 918 (1055)
..+++++|+||||+..... .-.+.+++.+++++| ++.|..++-+|+|++. ..+.|+.
T Consensus 595 ~~rlI~LDyDGTLlp~~~~--------~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~---~L~~~f~ 652 (854)
T PLN02205 595 TTRAILLDYDGTLMPQASI--------DKSPSSKSIDILNTLCRDKNNMVFIVSARSRK---TLADWFS 652 (854)
T ss_pred cCeEEEEecCCcccCCccc--------cCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHH---HHHHHhC
Confidence 5688999999999954321 112347889999987 7789999999999764 3455553
No 147
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=71.01 E-value=2.2 Score=41.87 Aligned_cols=16 Identities=38% Similarity=0.491 Sum_probs=14.0
Q ss_pred CcEEEEecCCcccccc
Q 001552 852 TRIVISDVDGTITKSD 867 (1055)
Q Consensus 852 dKIVISDIDGTITKSD 867 (1055)
-|+||||+||||..|.
T Consensus 5 ~~~viFD~DGTLiDs~ 20 (188)
T PRK10725 5 YAGLIFDMDGTILDTE 20 (188)
T ss_pred ceEEEEcCCCcCccCH
Confidence 4789999999999874
No 148
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=70.29 E-value=2.4 Score=42.90 Aligned_cols=15 Identities=33% Similarity=0.598 Sum_probs=13.3
Q ss_pred cEEEEecCCcccccc
Q 001552 853 RIVISDVDGTITKSD 867 (1055)
Q Consensus 853 KIVISDIDGTITKSD 867 (1055)
|+||||+||||..|.
T Consensus 2 k~iiFD~DGTL~ds~ 16 (220)
T TIGR03351 2 SLVVLDMAGTTVDED 16 (220)
T ss_pred cEEEEecCCCeeccC
Confidence 689999999999764
No 149
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=69.80 E-value=13 Score=36.34 Aligned_cols=94 Identities=16% Similarity=0.167 Sum_probs=53.3
Q ss_pred CChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCchHHHHHH
Q 001552 880 WSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFKIAC 959 (1055)
Q Consensus 880 WTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIac 959 (1055)
...|||.++.+.++++||++.-+|++ ...+..|+...- ..+.+ .++.+.+. ....+.|+.|...
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~-----~~~~~~l~~~~l--~~~f~-~v~~~~~~-------~~~kp~~~~~~~~- 151 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS-----KNADRILAKLGL--TDYFD-AIVDADEV-------KEGKPHPETFLLA- 151 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc-----hhHHHHHHHcCh--HHHCC-EeeehhhC-------CCCCCChHHHHHH-
Confidence 45789999999999999999999987 224445532111 11122 12221110 0112233445432
Q ss_pred HHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCC
Q 001552 960 LEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIP 994 (1055)
Q Consensus 960 L~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP 994 (1055)
++.+ .+ ++ ...+| +|++..|+.+=+++|++
T Consensus 152 ~~~~-~~-~~-~~~v~--IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 152 AELL-GV-SP-NECVV--FEDALAGVQAARAAGMF 181 (185)
T ss_pred HHHc-CC-CH-HHeEE--EeCcHhhHHHHHHCCCe
Confidence 2222 12 11 22444 89999999999999985
No 150
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=69.46 E-value=28 Score=41.44 Aligned_cols=86 Identities=17% Similarity=0.204 Sum_probs=61.2
Q ss_pred CCCChhhHHHHHHHHHHcC-CeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCchHHH
Q 001552 878 VDWSQTGVAHLFSAIKENG-YQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFK 956 (1055)
Q Consensus 878 kDWTH~GVAkLYskI~~NG-YkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFK 956 (1055)
+|-..||+.++.+.++++| |++.-+|+.+...+...-+-+ ++. ..|.. + .| +-|
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~l--------gi~---------~~f~~----~---~p-~~K 436 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAEL--------GID---------EVHAE----L---LP-EDK 436 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHh--------CCC---------eeecc----C---CH-HHH
Confidence 3567899999999999999 999999999887666555444 232 11211 1 12 246
Q ss_pred HHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCC
Q 001552 957 IACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGI 993 (1055)
Q Consensus 957 IacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGI 993 (1055)
.+.++.++.. . .-.+.+|++.+|+.|-+++||
T Consensus 437 ~~~v~~l~~~----~-~~v~~vGDg~nD~~al~~A~v 468 (556)
T TIGR01525 437 LAIVKELQEE----G-GVVAMVGDGINDAPALAAADV 468 (556)
T ss_pred HHHHHHHHHc----C-CEEEEEECChhHHHHHhhCCE
Confidence 6777777753 1 245579999999999999985
No 151
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=68.68 E-value=15 Score=38.35 Aligned_cols=52 Identities=25% Similarity=0.162 Sum_probs=39.7
Q ss_pred EecCCCcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCC--eEEEEccchhh
Q 001552 847 LWKWNTRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGY--QLLFLSARAIV 908 (1055)
Q Consensus 847 LW~~~dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGY--kILYLSARpIg 908 (1055)
|-+.+=|+||+|.|.|||.-+. +-.++-+++.++++++.+- +|+-+|..+..
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~~----------~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs 89 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPYE----------DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGS 89 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCCc----------CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCc
Confidence 3345668899999999997332 3446788999999998864 69999998643
No 152
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=66.98 E-value=17 Score=36.66 Aligned_cols=91 Identities=15% Similarity=0.312 Sum_probs=53.7
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHH---hcccCCcCCCCCceecCCCCCCccchhhhhccCc--hHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLF---TLKQDGKALPDGPVVISPDGLFPSLFREVIRRAP--HEFK 956 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~---~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkP--eeFK 956 (1055)
.|||.++.+.++++||++.-+|..+...... ++. .+. .-+ + -++.+. ++..+|| +.|+
T Consensus 86 ~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~---~~~~~~~l~---~~f-d-~v~~s~---------~~~~~KP~p~~~~ 148 (199)
T PRK09456 86 RPEVIAIMHKLREQGHRVVVLSNTNRLHTTF---WPEEYPEVR---AAA-D-HIYLSQ---------DLGMRKPEARIYQ 148 (199)
T ss_pred CHHHHHHHHHHHhCCCcEEEEcCCchhhHHH---HHhhchhHH---Hhc-C-EEEEec---------ccCCCCCCHHHHH
Confidence 5899999999999999999999986543321 221 000 001 1 122221 2223344 4665
Q ss_pred HHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCC
Q 001552 957 IACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPR 995 (1055)
Q Consensus 957 IacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~ 995 (1055)
.+ ++.+ .+ ++ ..-+| +|++..|+.+=+++|+..
T Consensus 149 ~~-~~~~-~~-~p-~~~l~--vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 149 HV-LQAE-GF-SA-ADAVF--FDDNADNIEAANALGITS 181 (199)
T ss_pred HH-HHHc-CC-Ch-hHeEE--eCCCHHHHHHHHHcCCEE
Confidence 43 2222 22 12 12355 789999999999999964
No 153
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=66.59 E-value=12 Score=36.82 Aligned_cols=91 Identities=19% Similarity=0.248 Sum_probs=59.7
Q ss_pred CCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCchH-H
Q 001552 877 GVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHE-F 955 (1055)
Q Consensus 877 GkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPee-F 955 (1055)
-.|...+|+.++.+.+++.|+++.-+|+-...-+......| +|++ .+ .|+ ++. .+|+. .
T Consensus 124 ~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~l--------gi~~-~~------v~a----~~~-~kP~~k~ 183 (215)
T PF00702_consen 124 LRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQL--------GIFD-SI------VFA----RVI-GKPEPKI 183 (215)
T ss_dssp EEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHT--------TSCS-EE------EEE----SHE-TTTHHHH
T ss_pred ecCcchhhhhhhhhhhhccCcceeeeecccccccccccccc--------cccc-cc------ccc----ccc-ccccchh
Confidence 34677899999999999999999999998877776666655 2421 00 111 111 35542 2
Q ss_pred HHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcC
Q 001552 956 KIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVG 992 (1055)
Q Consensus 956 KIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVG 992 (1055)
-..+++.++. . .. -++.+|+..||+.|=+++|
T Consensus 184 ~~~~i~~l~~--~--~~-~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 184 FLRIIKELQV--K--PG-EVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHHHHHHTC--T--GG-GEEEEESSGGHHHHHHHSS
T ss_pred HHHHHHHHhc--C--CC-EEEEEccCHHHHHHHHhCc
Confidence 2444555441 1 12 3457999999999999886
No 154
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=66.35 E-value=17 Score=38.74 Aligned_cols=95 Identities=13% Similarity=0.115 Sum_probs=55.5
Q ss_pred ChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCch--HHHHH
Q 001552 881 SQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPH--EFKIA 958 (1055)
Q Consensus 881 TH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPe--eFKIa 958 (1055)
..+||.++.+.|+++||++.-+|+.+..........+. ...|. +. -+..|. .++..+|+ .|...
T Consensus 96 lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~-----~~~L~--~~---f~~~fd----~~~g~KP~p~~y~~i 161 (220)
T TIGR01691 96 LYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSD-----AGNLT--PY---FSGYFD----TTVGLKTEAQSYVKI 161 (220)
T ss_pred cCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhcc-----ccchh--hh---cceEEE----eCcccCCCHHHHHHH
Confidence 46999999999999999999999986654433322221 01111 11 011221 12234454 44433
Q ss_pred HHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCC
Q 001552 959 CLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPR 995 (1055)
Q Consensus 959 cL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~ 995 (1055)
+ +.+ .+ ++ ...+| +|++..|+.|=+++|+..
T Consensus 162 ~-~~l-gv-~p-~e~lf--VgDs~~Di~AA~~AG~~t 192 (220)
T TIGR01691 162 A-GQL-GS-PP-REILF--LSDIINELDAARKAGLHT 192 (220)
T ss_pred H-HHh-Cc-Ch-hHEEE--EeCCHHHHHHHHHcCCEE
Confidence 2 222 22 22 12444 889999999999999864
No 155
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=66.16 E-value=3.2 Score=40.48 Aligned_cols=16 Identities=38% Similarity=0.584 Sum_probs=14.0
Q ss_pred cEEEEecCCccccccc
Q 001552 853 RIVISDVDGTITKSDV 868 (1055)
Q Consensus 853 KIVISDIDGTITKSDv 868 (1055)
|+||||+||||..|.-
T Consensus 2 ~~iiFD~DGTL~ds~~ 17 (185)
T TIGR02009 2 KAVIFDMDGVIVDTAP 17 (185)
T ss_pred CeEEEcCCCcccCChH
Confidence 6899999999998853
No 156
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=65.92 E-value=27 Score=33.71 Aligned_cols=90 Identities=19% Similarity=0.241 Sum_probs=54.3
Q ss_pred CChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCC---CCCceecCCCCCCccchhhhhccCch--H
Q 001552 880 WSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKAL---PDGPVVISPDGLFPSLFREVIRRAPH--E 954 (1055)
Q Consensus 880 WTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~L---P~GPVLLSPd~Lf~AL~REVI~KkPe--e 954 (1055)
...||+.++.+.++++||++.-+|+.+... . ..+. ..+| .+. ++.+ .++..++|+ .
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~---~~~~-----~~~l~~~f~~-i~~~---------~~~~~~KP~~~~ 145 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-A---VLVQ-----ELGLRDLFDV-VIFS---------GDVGRGKPDPDI 145 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-H---HHHH-----hcCCHHHCCE-EEEc---------CCCCCCCCCHHH
Confidence 356999999999999999999999977654 2 1221 0112 111 2222 123334554 4
Q ss_pred HHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCC
Q 001552 955 FKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIP 994 (1055)
Q Consensus 955 FKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP 994 (1055)
|+..+ +.+ .+ .+ ...++ +|++..|+.+=+++|+.
T Consensus 146 ~~~~~-~~~-~~-~~-~~~~~--vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 146 YLLAL-KKL-GL-KP-EECLF--VDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHH-HHc-CC-Cc-ceEEE--EcCCHHHHHHHHHcCCE
Confidence 55432 222 22 22 22344 89999999999999984
No 157
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=65.78 E-value=8.8 Score=40.10 Aligned_cols=48 Identities=17% Similarity=0.233 Sum_probs=28.6
Q ss_pred EEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcC-CeEEEEccchhhH
Q 001552 856 ISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENG-YQLLFLSARAIVQ 909 (1055)
Q Consensus 856 ISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NG-YkILYLSARpIgq 909 (1055)
.+|+||||+.- .+.-..-.+++++..+.++|.+.. ..+.-+|+|+...
T Consensus 1 ~lDyDGTL~p~------~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~ 49 (235)
T PF02358_consen 1 FLDYDGTLAPI------VDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDD 49 (235)
T ss_dssp EEE-TTTSS---------S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHH
T ss_pred CcccCCccCCC------CCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHH
Confidence 47999999962 222333456799999999999886 4677889998876
No 158
>PLN02580 trehalose-phosphatase
Probab=65.43 E-value=12 Score=43.46 Aligned_cols=53 Identities=11% Similarity=0.159 Sum_probs=39.8
Q ss_pred CCcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHH
Q 001552 851 NTRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQA 910 (1055)
Q Consensus 851 ~dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqA 910 (1055)
...++++|.||||+- |.+.-..-...+++..+.+.|++. +++.-+|+|+.-..
T Consensus 118 k~~~LfLDyDGTLaP------Iv~~Pd~A~~s~~~~~aL~~La~~-~~VAIVSGR~~~~L 170 (384)
T PLN02580 118 KKIALFLDYDGTLSP------IVDDPDRALMSDAMRSAVKNVAKY-FPTAIISGRSRDKV 170 (384)
T ss_pred CCeEEEEecCCccCC------CCCCcccccCCHHHHHHHHHHhhC-CCEEEEeCCCHHHH
Confidence 345688899999984 223334445678999999999988 58999999986543
No 159
>PRK11587 putative phosphatase; Provisional
Probab=64.04 E-value=3.7 Score=41.96 Aligned_cols=15 Identities=33% Similarity=0.448 Sum_probs=13.7
Q ss_pred cEEEEecCCcccccc
Q 001552 853 RIVISDVDGTITKSD 867 (1055)
Q Consensus 853 KIVISDIDGTITKSD 867 (1055)
|.||||+||||+.|.
T Consensus 4 k~viFDlDGTL~Ds~ 18 (218)
T PRK11587 4 KGFLFDLDGTLVDSL 18 (218)
T ss_pred CEEEEcCCCCcCcCH
Confidence 789999999999984
No 160
>PRK09437 bcp thioredoxin-dependent thiol peroxidase; Reviewed
Probab=64.01 E-value=1.2e+02 Score=29.45 Aligned_cols=46 Identities=17% Similarity=0.224 Sum_probs=31.9
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCC
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISP 936 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSP 936 (1055)
.+...++++.++++|..|+-+|... ....+.|++ + +++ ..|++.-+
T Consensus 50 ~~~l~~~~~~~~~~~v~vi~Is~d~---~~~~~~~~~---~--~~~-~~~~l~D~ 95 (154)
T PRK09437 50 ACGLRDNMDELKKAGVVVLGISTDK---PEKLSRFAE---K--ELL-NFTLLSDE 95 (154)
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHH---H--hCC-CCeEEECC
Confidence 3556789999999999999999753 366678875 2 334 35565533
No 161
>COG4996 Predicted phosphatase [General function prediction only]
Probab=63.71 E-value=8.5 Score=39.78 Aligned_cols=20 Identities=20% Similarity=0.358 Sum_probs=14.3
Q ss_pred cEEEEecCCccccccccccc
Q 001552 853 RIVISDVDGTITKSDVLGQF 872 (1055)
Q Consensus 853 KIVISDIDGTITKSDvlGhI 872 (1055)
+++++|.|||+...+-...+
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl 20 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSL 20 (164)
T ss_pred CcEEEeCCCcccccccchhc
Confidence 46899999999875544333
No 162
>PTZ00256 glutathione peroxidase; Provisional
Probab=63.27 E-value=39 Score=34.51 Aligned_cols=61 Identities=18% Similarity=0.284 Sum_probs=37.9
Q ss_pred ecCC-cccccccccccc-ccc-CCCCC------hhhHHHHHHHHHHcCCeEEEEccch-h----hHHHHHHHHHH
Q 001552 858 DVDG-TITKSDVLGQFM-PLV-GVDWS------QTGVAHLFSAIKENGYQLLFLSARA-I----VQAYHTRRFLF 918 (1055)
Q Consensus 858 DIDG-TITKSDvlGhIl-P~L-GkDWT------H~GVAkLYskI~~NGYkILYLSARp-I----gqAd~TR~yL~ 918 (1055)
|+|| |++.++..|+.. =.+ -..|. .|...+||.+++++|..|+-++.-. . .-....+.|+.
T Consensus 27 d~~G~~vsLs~~~Gk~vvlv~n~atwCp~C~~e~p~l~~l~~~~~~~gv~vv~vs~~~~~~~~~~~~~~~~~f~~ 101 (183)
T PTZ00256 27 DIDGQLVQLSKFKGKKAIIVVNVACKCGLTSDHYTQLVELYKQYKSQGLEILAFPCNQFMEQEPWDEPEIKEYVQ 101 (183)
T ss_pred cCCCCEEeHHHhCCCcEEEEEEECCCCCchHHHHHHHHHHHHHHhhCCcEEEEEecccccccCCCCHHHHHHHHH
Confidence 5565 466666666521 011 24453 4677889999999999999998531 1 12356777773
No 163
>cd03018 PRX_AhpE_like Peroxiredoxin (PRX) family, AhpE-like subfamily; composed of proteins similar to Mycobacterium tuberculosis AhpE. AhpE is described as a 1-cys PRX because of the absence of a resolving cysteine. The structure and sequence of AhpE, however, show greater similarity to 2-cys PRXs than 1-cys PRXs. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. The first step of catalysis is the nucleophilic attack by the peroxidatic cysteine on the peroxide leading to the formation of a cysteine sulfenic acid intermediate. The absence of a resolving cysteine suggests that functional AhpE is regenerated by an external reductant. The solution behavior and crystal structure of AhpE show that it forms dimers and octamers.
Probab=63.04 E-value=75 Score=30.22 Aligned_cols=34 Identities=12% Similarity=0.197 Sum_probs=26.2
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLF 918 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~ 918 (1055)
-+.+.+++.++.+.|.+|+-+|.-+ ....+.|++
T Consensus 48 ~~~l~~~~~~~~~~~v~vi~vs~d~---~~~~~~~~~ 81 (149)
T cd03018 48 LCALRDSLELFEAAGAEVLGISVDS---PFSLRAWAE 81 (149)
T ss_pred HHHHHHHHHHHHhCCCEEEEecCCC---HHHHHHHHH
Confidence 3667788999999999999998754 345778875
No 164
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=62.06 E-value=19 Score=36.42 Aligned_cols=67 Identities=9% Similarity=0.096 Sum_probs=49.7
Q ss_pred CCCcEEEEecCCccccccccccccc--------------------ccC----CCCChhhHHHHHHHHHHcCCeEEEEccc
Q 001552 850 WNTRIVISDVDGTITKSDVLGQFMP--------------------LVG----VDWSQTGVAHLFSAIKENGYQLLFLSAR 905 (1055)
Q Consensus 850 ~~dKIVISDIDGTITKSDvlGhIlP--------------------~LG----kDWTH~GVAkLYskI~~NGYkILYLSAR 905 (1055)
...+++|.|+|.||..|-....+.. .++ .-...||+.++...++++ |++.-.|+-
T Consensus 4 ~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~-yel~I~T~~ 82 (156)
T TIGR02250 4 EKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKL-YEMHVYTMG 82 (156)
T ss_pred CCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhh-cEEEEEeCC
Confidence 3456799999999999876532110 011 011369999999999865 999999999
Q ss_pred hhhHHHHHHHHH
Q 001552 906 AIVQAYHTRRFL 917 (1055)
Q Consensus 906 pIgqAd~TR~yL 917 (1055)
+-..|+..-++|
T Consensus 83 ~~~yA~~vl~~l 94 (156)
T TIGR02250 83 TRAYAQAIAKLI 94 (156)
T ss_pred cHHHHHHHHHHh
Confidence 999888888888
No 165
>cd03017 PRX_BCP Peroxiredoxin (PRX) family, Bacterioferritin comigratory protein (BCP) subfamily; composed of thioredoxin-dependent thiol peroxidases, widely expressed in pathogenic bacteria, that protect cells against toxicity from reactive oxygen species by reducing and detoxifying hydroperoxides. The protein was named BCP based on its electrophoretic mobility before its function was known. BCP shows substrate selectivity toward fatty acid hydroperoxides rather than hydrogen peroxide or alkyl hydroperoxides. BCP contains the peroxidatic cysteine but appears not to possess a resolving cysteine (some sequences, not all, contain a second cysteine but its role is still unknown). Unlike other PRXs, BCP exists as a monomer. The plant homolog of BCP is PRX Q, which is expressed only in leaves and is cellularly localized in the chloroplasts and the guard cells of stomata. Also included in this subfamily is the fungal nuclear protein, Dot5p (for disrupter of telomere silencing protein 5), w
Probab=61.76 E-value=66 Score=30.20 Aligned_cols=34 Identities=15% Similarity=0.179 Sum_probs=26.5
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLF 918 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~ 918 (1055)
.+.+.+++.++.+.|..|+-+|... ....++|++
T Consensus 43 ~~~l~~~~~~~~~~~~~vv~is~d~---~~~~~~~~~ 76 (140)
T cd03017 43 ACDFRDLYEEFKALGAVVIGVSPDS---VESHAKFAE 76 (140)
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHH
Confidence 4567788889999999999999754 355678875
No 166
>cd00340 GSH_Peroxidase Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue per subunit, which is involved in catalysis. Different isoenzymes are known in mammals,which are involved in protection against reactive oxygen species, redox regulation of many metabolic processes, peroxinitrite scavenging, and modulation of inflammatory processes.
Probab=61.51 E-value=51 Score=32.27 Aligned_cols=62 Identities=18% Similarity=0.278 Sum_probs=37.9
Q ss_pred EecCC-cccccccccccc-cccCCCCC-----hhhHHHHHHHHHHcCCeEEEEccchh-----hHHHHHHHHHH
Q 001552 857 SDVDG-TITKSDVLGQFM-PLVGVDWS-----QTGVAHLFSAIKENGYQLLFLSARAI-----VQAYHTRRFLF 918 (1055)
Q Consensus 857 SDIDG-TITKSDvlGhIl-P~LGkDWT-----H~GVAkLYskI~~NGYkILYLSARpI-----gqAd~TR~yL~ 918 (1055)
-|.|| |++.++..|+.. =.....|. -|...+||++++++|..|+-++.... .-....+.|++
T Consensus 8 ~d~~G~~v~l~~~~Gk~vvl~fwatwC~C~~e~p~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~f~~ 81 (152)
T cd00340 8 KDIDGEPVSLSKYKGKVLLIVNVASKCGFTPQYEGLEALYEKYKDRGLVVLGFPCNQFGGQEPGSNEEIKEFCE 81 (152)
T ss_pred ECCCCCEEeHHHhCCCEEEEEEEcCCCCchHHHHHHHHHHHHhcCCCEEEEEeccCccccCCCCCHHHHHHHHH
Confidence 45666 455566666421 12233442 35667789999889999999986431 22356778874
No 167
>cd02971 PRX_family Peroxiredoxin (PRX) family; composed of the different classes of PRXs including many proteins originally known as bacterioferritin comigratory proteins (BCP), based on their electrophoretic mobility before their function was identified. PRXs are thiol-specific antioxidant (TSA) proteins also known as TRX peroxidases and alkyl hydroperoxide reductase C22 (AhpC) proteins. They confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either TRX, glutathione, trypanothione and AhpF. They are distinct from other peroxidases in that they have no cofactors such as metals or prosthetic groups. The first step of catalysis, common to all PRXs, is the nucleophilic attack by the catalytic cysteine (also known as the peroxidatic cysteine) on the peroxide leading to cleavage of the oxygen-oxygen bond and the formation of a
Probab=60.85 E-value=75 Score=29.74 Aligned_cols=34 Identities=12% Similarity=0.193 Sum_probs=26.8
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLF 918 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~ 918 (1055)
.+...++|.++.+.|..|+-+|.-. ....+.|+.
T Consensus 42 ~~~l~~~~~~~~~~~~~~i~is~d~---~~~~~~~~~ 75 (140)
T cd02971 42 LCAFRDLAEEFAKGGAEVLGVSVDS---PFSHKAWAE 75 (140)
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCC---HHHHHHHHh
Confidence 5778889999988999999998743 345677774
No 168
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=60.74 E-value=28 Score=44.60 Aligned_cols=113 Identities=17% Similarity=0.242 Sum_probs=70.6
Q ss_pred ccC-CCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCC---------cCCC-------C--CceecC
Q 001552 875 LVG-VDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDG---------KALP-------D--GPVVIS 935 (1055)
Q Consensus 875 ~LG-kDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g---------~~LP-------~--GPVLLS 935 (1055)
.+| .|..+++|.+..+.++++|.+++.+|+|....+..+..=+.-+..+. ..++ + ..++.-
T Consensus 562 li~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G 641 (997)
T TIGR01106 562 LISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHG 641 (997)
T ss_pred EEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEh
Confidence 444 58889999999999999999999999998877755554442111000 0000 0 011111
Q ss_pred CCCCCccch----hh--------hhccCchHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhc--CCC
Q 001552 936 PDGLFPSLF----RE--------VIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKV--GIP 994 (1055)
Q Consensus 936 Pd~Lf~AL~----RE--------VI~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraV--GIP 994 (1055)
+ -+..+. .+ |..|-..+-|..+++.++.. .-.+|..|+..||+-|-+++ ||.
T Consensus 642 ~--~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-----g~vv~~~GDG~ND~paLk~AdVGia 707 (997)
T TIGR01106 642 S--DLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ-----GAIVAVTGDGVNDSPALKKADIGVA 707 (997)
T ss_pred H--HhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC-----CCEEEEECCCcccHHHHhhCCccee
Confidence 1 011110 11 33443446788888888875 24778999999999998875 564
No 169
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=60.70 E-value=4.1 Score=40.97 Aligned_cols=15 Identities=20% Similarity=0.539 Sum_probs=13.0
Q ss_pred cEEEEecCCcccccc
Q 001552 853 RIVISDVDGTITKSD 867 (1055)
Q Consensus 853 KIVISDIDGTITKSD 867 (1055)
.+||||+||||..|.
T Consensus 1 ~~viFD~DGTLiDs~ 15 (197)
T TIGR01548 1 QALVLDMDGVMADVS 15 (197)
T ss_pred CceEEecCceEEech
Confidence 368999999999875
No 170
>PRK10671 copA copper exporting ATPase; Provisional
Probab=60.68 E-value=31 Score=43.16 Aligned_cols=86 Identities=14% Similarity=0.209 Sum_probs=62.1
Q ss_pred CCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCchHHHH
Q 001552 878 VDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFKI 957 (1055)
Q Consensus 878 kDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKI 957 (1055)
.|-.++|+.++...+++.||+++-+|+.....+....+.+ +++. .+.. + .|+ -|.
T Consensus 648 ~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~l--------gi~~---------~~~~----~---~p~-~K~ 702 (834)
T PRK10671 648 RDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEA--------GIDE---------VIAG----V---LPD-GKA 702 (834)
T ss_pred cCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc--------CCCE---------EEeC----C---CHH-HHH
Confidence 4666899999999999999999999998776665554444 3431 1111 1 243 388
Q ss_pred HHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCC
Q 001552 958 ACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGI 993 (1055)
Q Consensus 958 acL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGI 993 (1055)
++++.++.. .. -.+.+|+..+|+.|-+++|+
T Consensus 703 ~~i~~l~~~----~~-~v~~vGDg~nD~~al~~Agv 733 (834)
T PRK10671 703 EAIKRLQSQ----GR-QVAMVGDGINDAPALAQADV 733 (834)
T ss_pred HHHHHHhhc----CC-EEEEEeCCHHHHHHHHhCCe
Confidence 888888754 11 34579999999999999987
No 171
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=60.45 E-value=30 Score=35.89 Aligned_cols=105 Identities=18% Similarity=0.260 Sum_probs=69.9
Q ss_pred EecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCC
Q 001552 857 SDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISP 936 (1055)
Q Consensus 857 SDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSP 936 (1055)
-++++||+. -|+++ +-|.+-.+.+++. ..|+--|+--.+--....+++ ++| -
T Consensus 19 ~~v~~tiat---gGklf---------~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~--------gi~-------~ 70 (152)
T COG4087 19 GKVLYTIAT---GGKLF---------SEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFV--------GIP-------V 70 (152)
T ss_pred ceEEEEEcc---CcEEc---------HhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHc--------CCc-------e
Confidence 468899997 56666 4556666777777 788877775555444333333 466 3
Q ss_pred CCCCccchhhhhccCchHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCCCcEEEECCCC
Q 001552 937 DGLFPSLFREVIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPRGKIFIINPKG 1005 (1055)
Q Consensus 937 d~Lf~AL~REVI~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~sRIFiINpkG 1005 (1055)
.+.|. ....+-|...++.|+.- +-+..+.||..||+.|-+++.+- |-+|.+.|
T Consensus 71 ~rv~a--------~a~~e~K~~ii~eLkk~-----~~k~vmVGnGaND~laLr~ADlG---I~tiq~e~ 123 (152)
T COG4087 71 ERVFA--------GADPEMKAKIIRELKKR-----YEKVVMVGNGANDILALREADLG---ICTIQQEG 123 (152)
T ss_pred eeeec--------ccCHHHHHHHHHHhcCC-----CcEEEEecCCcchHHHhhhcccc---eEEeccCC
Confidence 33332 12235689989988862 35778999999999999998654 45666633
No 172
>cd03012 TlpA_like_DipZ_like TlpA-like family, DipZ-like subfamily; composed uncharacterized proteins containing a TlpA-like TRX domain. Some members show domain architectures similar to that of E. coli DipZ protein (also known as DsbD). The only eukaryotic members of the TlpA family belong to this subfamily. TlpA is a disulfide reductase known to have a crucial role in the biogenesis of cytochrome aa3.
Probab=59.97 E-value=20 Score=33.75 Aligned_cols=37 Identities=8% Similarity=0.116 Sum_probs=24.3
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchh---hHHHHHHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAI---VQAYHTRRFLF 918 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpI---gqAd~TR~yL~ 918 (1055)
.+.+.+||+++++.|..++.++.-.. .-....+.|++
T Consensus 42 ~p~l~~l~~~~~~~~~~vi~i~~~~~~~~~~~~~~~~~~~ 81 (126)
T cd03012 42 LPYLTDLEQKYKDDGLVVIGVHSPEFAFERDLANVKSAVL 81 (126)
T ss_pred HHHHHHHHHHcCcCCeEEEEeccCccccccCHHHHHHHHH
Confidence 46677888888888888888875321 12445556664
No 173
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=59.64 E-value=4 Score=40.65 Aligned_cols=17 Identities=41% Similarity=0.554 Sum_probs=14.4
Q ss_pred EEEEecCCccccccccc
Q 001552 854 IVISDVDGTITKSDVLG 870 (1055)
Q Consensus 854 IVISDIDGTITKSDvlG 870 (1055)
+++||+||||+..|..-
T Consensus 1 ~a~FD~DgTL~~~~s~~ 17 (202)
T TIGR01490 1 LAFFDFDGTLTAKDTLF 17 (202)
T ss_pred CeEEccCCCCCCCchHH
Confidence 47999999999988753
No 174
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=58.38 E-value=5.3 Score=42.11 Aligned_cols=16 Identities=50% Similarity=0.694 Sum_probs=14.1
Q ss_pred CcEEEEecCCcccccc
Q 001552 852 TRIVISDVDGTITKSD 867 (1055)
Q Consensus 852 dKIVISDIDGTITKSD 867 (1055)
-|.||||+||||..|.
T Consensus 22 ~k~viFDlDGTLiDs~ 37 (248)
T PLN02770 22 LEAVLFDVDGTLCDSD 37 (248)
T ss_pred cCEEEEcCCCccCcCH
Confidence 3789999999999875
No 175
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=58.21 E-value=16 Score=36.85 Aligned_cols=95 Identities=13% Similarity=0.205 Sum_probs=52.3
Q ss_pred ChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHH-hcccCCcCCCCCceecCCCCCCccchhhhhccCc--hHHHH
Q 001552 881 SQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLF-TLKQDGKALPDGPVVISPDGLFPSLFREVIRRAP--HEFKI 957 (1055)
Q Consensus 881 TH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~-~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkP--eeFKI 957 (1055)
..||+.++.+.++++||++.-+|+.+..........+. .+. ..| + .++.+- ++..+|| +.|+.
T Consensus 95 ~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~---~~f-d-~v~~s~---------~~~~~KP~p~~~~~ 160 (211)
T TIGR02247 95 LRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIM---ALF-D-AVVESC---------LEGLRKPDPRIYQL 160 (211)
T ss_pred cChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhH---hhC-C-EEEEee---------ecCCCCCCHHHHHH
Confidence 36999999999999999999999864332111111110 000 001 1 122211 1222344 45654
Q ss_pred HHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCC
Q 001552 958 ACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPR 995 (1055)
Q Consensus 958 acL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~ 995 (1055)
.+ +.+ .+-|. .-+| +|++..|+.+=+++|+..
T Consensus 161 ~~-~~~-g~~~~--~~l~--i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 161 ML-ERL-GVAPE--ECVF--LDDLGSNLKPAAALGITT 192 (211)
T ss_pred HH-HHc-CCCHH--HeEE--EcCCHHHHHHHHHcCCEE
Confidence 33 222 12121 2344 699999999999999853
No 176
>PLN02412 probable glutathione peroxidase
Probab=57.44 E-value=64 Score=32.57 Aligned_cols=51 Identities=16% Similarity=0.359 Sum_probs=32.6
Q ss_pred EEecCC-ccccccccccccc-ccCCCCC------hhhHHHHHHHHHHcCCeEEEEccch
Q 001552 856 ISDVDG-TITKSDVLGQFMP-LVGVDWS------QTGVAHLFSAIKENGYQLLFLSARA 906 (1055)
Q Consensus 856 ISDIDG-TITKSDvlGhIlP-~LGkDWT------H~GVAkLYskI~~NGYkILYLSARp 906 (1055)
.-|++| +++.++..|+..- ..-..|. .+...+||++++++|..|+-+++-+
T Consensus 14 l~d~~G~~v~l~~~~gk~vlv~f~a~~C~~c~~e~~~l~~l~~~~~~~g~~vvgv~~~~ 72 (167)
T PLN02412 14 VKDIGGNDVSLNQYKGKVLLIVNVASKCGLTDSNYKELNVLYEKYKEQGFEILAFPCNQ 72 (167)
T ss_pred EECCCCCEEeHHHhCCCEEEEEEeCCCCCChHHHHHHHHHHHHHHhhCCcEEEEecccc
Confidence 345666 4666666664211 1122332 3667789999999999999999753
No 177
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=56.60 E-value=47 Score=33.55 Aligned_cols=94 Identities=20% Similarity=0.241 Sum_probs=55.1
Q ss_pred ChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCc--hHHHHH
Q 001552 881 SQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAP--HEFKIA 958 (1055)
Q Consensus 881 TH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkP--eeFKIa 958 (1055)
..|||.++...++++||++.-+|+.+-.. .+..|+.+.= ..+-+ .++++.+ +...+| +.|+.+
T Consensus 95 ~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~---~~~~l~~~~l--~~~f~-~i~~~~~---------~~~~KP~~~~~~~~ 159 (221)
T TIGR02253 95 VYPGVRDTLMELRESGYRLGIITDGLPVK---QWEKLERLGV--RDFFD-AVITSEE---------EGVEKPHPKIFYAA 159 (221)
T ss_pred CCCCHHHHHHHHHHCCCEEEEEeCCchHH---HHHHHHhCCh--HHhcc-EEEEecc---------CCCCCCCHHHHHHH
Confidence 36899999999999999999999986432 2334432100 01112 1333321 122344 455544
Q ss_pred HHHHHHhhCCCCCCCEEEccCCCc-hhHHHHHhcCCCC
Q 001552 959 CLEDIKALFPSDCNPFYAGFGNRD-TDEISYLKVGIPR 995 (1055)
Q Consensus 959 cL~dIk~LFP~~~nPFyAGFGNR~-TDv~AYraVGIP~ 995 (1055)
+ +.+ . +++ ...+ -+|++. +|+.+=+++|+..
T Consensus 160 ~-~~~-~-~~~-~~~~--~igDs~~~di~~A~~aG~~~ 191 (221)
T TIGR02253 160 L-KRL-G-VKP-EEAV--MVGDRLDKDIKGAKNLGMKT 191 (221)
T ss_pred H-HHc-C-CCh-hhEE--EECCChHHHHHHHHHCCCEE
Confidence 3 221 1 122 1234 489997 8999999999876
No 178
>PRK13191 putative peroxiredoxin; Provisional
Probab=56.12 E-value=75 Score=33.85 Aligned_cols=104 Identities=14% Similarity=0.229 Sum_probs=62.0
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccC-CcCCCCCceecCCCCCCccchhhhhccCchHHHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQD-GKALPDGPVVISPDGLFPSLFREVIRRAPHEFKIACL 960 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~-g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL 960 (1055)
.+..+++|..+++.|.+++=+|.-+. ..-++|...+++. ++.+| -|++.-+++
T Consensus 53 l~~l~~~~~ef~~~g~~VigvS~Ds~---~~h~aw~~~~~~~~~~~i~-fPllsD~~~---------------------- 106 (215)
T PRK13191 53 FYSFAKKYEEFKKLNTELIGLSVDSN---ISHIEWVMWIEKNLKVEVP-FPIIADPMG---------------------- 106 (215)
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCH---HHHHHHHhhHHHhcCCCCc-eEEEECCch----------------------
Confidence 56788899999999999999998654 2234555444432 34454 466665532
Q ss_pred HHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCCCcEEEECCCCceeeeccc---CCcchhhHHhhhccc
Q 001552 961 EDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPRGKIFIINPKGEVVVNHRV---DSKTYSSIHALVHGM 1028 (1055)
Q Consensus 961 ~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~sRIFiINpkGel~~e~~~---~~sSY~~L~dlVD~~ 1028 (1055)
.+...|.- +... ..|...--.|+||++|.|+..... ...++..+-..++.+
T Consensus 107 -~ia~~ygv--------~~~~--------~~~~~~r~tfIID~~G~Ir~~~~~~~~~gr~~~eilr~l~al 160 (215)
T PRK13191 107 -NVAKRLGM--------IHAE--------SSTATVRAVFIVDDKGTVRLILYYPMEIGRNIDEILRAIRAL 160 (215)
T ss_pred -HHHHHcCC--------cccc--------cCCceeEEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 22223211 0000 013355578999999999864321 124677777777654
No 179
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=55.92 E-value=43 Score=42.56 Aligned_cols=106 Identities=18% Similarity=0.164 Sum_probs=68.3
Q ss_pred ccC-CCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCc----eecCCCCCCccchh----
Q 001552 875 LVG-VDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGP----VVISPDGLFPSLFR---- 945 (1055)
Q Consensus 875 ~LG-kDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GP----VLLSPd~Lf~AL~R---- 945 (1055)
.+| .|..+++|.+....+++.|.+++.+|+....-|..+..-+. ..-+... .+..+ .+..+..
T Consensus 531 l~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~g------i~~~~~~v~~~~~~g~--~l~~~~~~~~~ 602 (917)
T TIGR01116 531 VVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIG------IFSPDEDVTFKSFTGR--EFDEMGPAKQR 602 (917)
T ss_pred EeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcC------CCCCCccccceeeeHH--HHhhCCHHHHH
Confidence 444 58889999999999999999999999997766666665552 1111111 11100 0111100
Q ss_pred ------hhhccCchHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCC
Q 001552 946 ------EVIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGI 993 (1055)
Q Consensus 946 ------EVI~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGI 993 (1055)
-|..|-..+.|..+++.++.. .-.+|..|+..||+.|-++++|
T Consensus 603 ~~~~~~~v~ar~~P~~K~~iV~~lq~~-----g~~va~iGDG~ND~~alk~AdV 651 (917)
T TIGR01116 603 AACRSAVLFSRVEPSHKSELVELLQEQ-----GEIVAMTGDGVNDAPALKKADI 651 (917)
T ss_pred HhhhcCeEEEecCHHHHHHHHHHHHhc-----CCeEEEecCCcchHHHHHhCCe
Confidence 022222335688888877753 2466779999999999999876
No 180
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=55.48 E-value=23 Score=38.59 Aligned_cols=48 Identities=19% Similarity=0.465 Sum_probs=29.9
Q ss_pred hhhHHHHHHHH--HHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCC--ceecCCC
Q 001552 882 QTGVAHLFSAI--KENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDG--PVVISPD 937 (1055)
Q Consensus 882 H~GVAkLYskI--~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~G--PVLLSPd 937 (1055)
+||+.++++.+ +.+|+.++-||- +..-.+..||+ .++|-.- .|+++|-
T Consensus 73 ~pgm~~~l~~l~~~~~~~~~~IiSD---aNs~fI~~iL~-----~~gl~~~f~~I~TNpa 124 (234)
T PF06888_consen 73 DPGMKELLRFLAKNQRGFDLIIISD---ANSFFIETILE-----HHGLRDCFSEIFTNPA 124 (234)
T ss_pred CccHHHHHHHHHhcCCCceEEEEeC---CcHhHHHHHHH-----hCCCccccceEEeCCc
Confidence 56667777777 346888888875 33455666774 4555432 5677763
No 181
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=54.96 E-value=21 Score=39.63 Aligned_cols=54 Identities=19% Similarity=0.340 Sum_probs=41.0
Q ss_pred cCCCcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCC-eEEEEccchhh
Q 001552 849 KWNTRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGY-QLLFLSARAIV 908 (1055)
Q Consensus 849 ~~~dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGY-kILYLSARpIg 908 (1055)
+...+.+++|.|||||. +.+.--..++-++...+.++|....- .+..+|+|..-
T Consensus 15 ~a~~~~~~lDyDGTl~~------i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~ 69 (266)
T COG1877 15 NARKRLLFLDYDGTLTE------IVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLA 69 (266)
T ss_pred cccceEEEEeccccccc------cccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHH
Confidence 45678899999999985 44455556677899999999988843 46667888753
No 182
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=54.62 E-value=7.4 Score=38.31 Aligned_cols=41 Identities=17% Similarity=0.139 Sum_probs=25.5
Q ss_pred HHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCCCcEEE
Q 001552 957 IACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPRGKIFI 1000 (1055)
Q Consensus 957 IacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~sRIFi 1000 (1055)
.++|+.|+.. ......+-.+|+.+-....+.+||+...+|-
T Consensus 133 ~~~l~~L~~~---Gi~~~i~TGD~~~~a~~~~~~lgi~~~~v~a 173 (215)
T PF00702_consen 133 KEALQELKEA---GIKVAILTGDNESTASAIAKQLGIFDSIVFA 173 (215)
T ss_dssp HHHHHHHHHT---TEEEEEEESSEHHHHHHHHHHTTSCSEEEEE
T ss_pred hhhhhhhhcc---Ccceeeeeccccccccccccccccccccccc
Confidence 3456667665 1123444556666667777889997766665
No 183
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=54.30 E-value=54 Score=40.84 Aligned_cols=87 Identities=17% Similarity=0.233 Sum_probs=64.8
Q ss_pred CCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCchHHHH
Q 001552 878 VDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFKI 957 (1055)
Q Consensus 878 kDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKI 957 (1055)
+|-.++|+.+.++.+++.|++++-+|+....-+.....-| ++.. .+ .| -.| +-|.
T Consensus 444 ~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~l--------GI~~---------v~---a~----~~P-edK~ 498 (675)
T TIGR01497 444 KDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEA--------GVDD---------FI---AE----ATP-EDKI 498 (675)
T ss_pred cccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc--------CCCE---------EE---cC----CCH-HHHH
Confidence 4778999999999999999999999998776666665555 2321 11 11 134 4499
Q ss_pred HHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCC
Q 001552 958 ACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIP 994 (1055)
Q Consensus 958 acL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP 994 (1055)
++++.+++. . -.++..|+..||+-|-+++++.
T Consensus 499 ~~v~~lq~~----g-~~VamvGDG~NDapAL~~AdvG 530 (675)
T TIGR01497 499 ALIRQEQAE----G-KLVAMTGDGTNDAPALAQADVG 530 (675)
T ss_pred HHHHHHHHc----C-CeEEEECCCcchHHHHHhCCEe
Confidence 999998875 2 3567899999999999988643
No 184
>cd02969 PRX_like1 Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a conserved cysteine that aligns to the first cysteine in the CXXC motif of TRX. This does not correspond to the peroxidatic cysteine found in PRXs, which aligns to the second cysteine in the CXXC motif of TRX. In addition, these proteins do not contain the other two conserved residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF.
Probab=54.20 E-value=65 Score=31.94 Aligned_cols=48 Identities=10% Similarity=0.147 Sum_probs=32.9
Q ss_pred hhHHHHHHHHHHcCCeEEEEccchh-----hHHHHHHHHHHhcccCCcCCCCCceecCC
Q 001552 883 TGVAHLFSAIKENGYQLLFLSARAI-----VQAYHTRRFLFTLKQDGKALPDGPVVISP 936 (1055)
Q Consensus 883 ~GVAkLYskI~~NGYkILYLSARpI-----gqAd~TR~yL~~i~Q~g~~LP~GPVLLSP 936 (1055)
+.+.+|+.++.+.+.+|+-+|.-+. .-....+.|++ .+++| .|++..+
T Consensus 45 ~~l~~l~~~~~~~~v~~v~is~d~~~~~~~d~~~~~~~~~~-----~~~~~-~~~l~D~ 97 (171)
T cd02969 45 DRLNRLAKEYGAKGVAVVAINSNDIEAYPEDSPENMKAKAK-----EHGYP-FPYLLDE 97 (171)
T ss_pred HHHHHHHHHHhhCCeEEEEEecCccccccccCHHHHHHHHH-----HCCCC-ceEEECC
Confidence 5788899999888999998887553 22456666664 34555 5666544
No 185
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=53.85 E-value=50 Score=38.30 Aligned_cols=91 Identities=14% Similarity=0.051 Sum_probs=57.3
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCchHHHHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFKIACLE 961 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL~ 961 (1055)
.||+.++...++++||++.-+|+.+-..+...-+.+. +. .-|. .++...+. - ..++|+.|..++ +
T Consensus 332 ~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~-l~---~~f~--~i~~~d~v-~-------~~~kP~~~~~al-~ 396 (459)
T PRK06698 332 YPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYD-LD---QWVT--ETFSIEQI-N-------SLNKSDLVKSIL-N 396 (459)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCC-cH---hhcc--eeEecCCC-C-------CCCCcHHHHHHH-H
Confidence 5899999999999999999999987665555444431 10 1121 13332211 0 134677665443 2
Q ss_pred HHHhhCCCCCCCEEEccCCCchhHHHHHhcCCC
Q 001552 962 DIKALFPSDCNPFYAGFGNRDTDEISYLKVGIP 994 (1055)
Q Consensus 962 dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP 994 (1055)
. +.+ ...+ .+|++.+|+.+=+++|+.
T Consensus 397 ~----l~~-~~~v--~VGDs~~Di~aAk~AG~~ 422 (459)
T PRK06698 397 K----YDI-KEAA--VVGDRLSDINAAKDNGLI 422 (459)
T ss_pred h----cCc-ceEE--EEeCCHHHHHHHHHCCCe
Confidence 2 233 2233 599999999999999985
No 186
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=53.54 E-value=55 Score=34.79 Aligned_cols=112 Identities=21% Similarity=0.290 Sum_probs=66.7
Q ss_pred CCcEEEEecCCccccccc----ccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcC
Q 001552 851 NTRIVISDVDGTITKSDV----LGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKA 926 (1055)
Q Consensus 851 ~dKIVISDIDGTITKSDv----lGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~ 926 (1055)
.-|.+|+|||||+|.--. -|+.++..-. ..|.. ...|.+.|-++--+|+|.-.....--.=| +
T Consensus 7 ~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv---~DG~G--ik~l~~~Gi~vAIITGr~s~ive~Ra~~L--------G 73 (170)
T COG1778 7 NIKLLILDVDGVLTDGKLYYDENGEEIKAFNV---RDGHG--IKLLLKSGIKVAIITGRDSPIVEKRAKDL--------G 73 (170)
T ss_pred hceEEEEeccceeecCeEEEcCCCceeeeeec---cCcHH--HHHHHHcCCeEEEEeCCCCHHHHHHHHHc--------C
Confidence 457899999999996321 2333332221 12221 24667899999999999655443322222 2
Q ss_pred CCCCceecCCCCCCccchhhhhccCchHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCC
Q 001552 927 LPDGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPR 995 (1055)
Q Consensus 927 LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~ 995 (1055)
++ .+| .- -.=|.+++.+|+.-..-... =.|-.|+-..|.-+.+++|++-
T Consensus 74 I~---------~~~----qG------~~dK~~a~~~L~~~~~l~~e-~~ayiGDD~~Dlpvm~~vGls~ 122 (170)
T COG1778 74 IK---------HLY----QG------ISDKLAAFEELLKKLNLDPE-EVAYVGDDLVDLPVMEKVGLSV 122 (170)
T ss_pred Cc---------eee----ec------hHhHHHHHHHHHHHhCCCHH-HhhhhcCccccHHHHHHcCCcc
Confidence 33 111 11 11278887787755433211 1234788999999999999864
No 187
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=53.49 E-value=7.1 Score=40.89 Aligned_cols=92 Identities=20% Similarity=0.227 Sum_probs=49.4
Q ss_pred ChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCc--hHHHHH
Q 001552 881 SQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAP--HEFKIA 958 (1055)
Q Consensus 881 TH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkP--eeFKIa 958 (1055)
+-+||.++...++.+|.++.-.|+++-..+..+..=+ + -++.-+.+... -++...|| +.|=.+
T Consensus 87 ~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~------g-l~~~f~~~v~~--------~dv~~~KP~Pd~yL~A 151 (221)
T COG0637 87 PIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARL------G-LLDYFDVIVTA--------DDVARGKPAPDIYLLA 151 (221)
T ss_pred CCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHc------c-ChhhcchhccH--------HHHhcCCCCCHHHHHH
Confidence 4578888888888888777777776533333222222 1 01111111111 12333344 455333
Q ss_pred HHHHHHhh-CCCCCCCEEEccCCCchhHHHHHhcCCC
Q 001552 959 CLEDIKAL-FPSDCNPFYAGFGNRDTDEISYLKVGIP 994 (1055)
Q Consensus 959 cL~dIk~L-FP~~~nPFyAGFGNR~TDv~AYraVGIP 994 (1055)
.+.| +.+. -. .+|.+..+.+.|-+++|+.
T Consensus 152 ----a~~Lgv~P~--~C-vviEDs~~Gi~Aa~aAGm~ 181 (221)
T COG0637 152 ----AERLGVDPE--EC-VVVEDSPAGIQAAKAAGMR 181 (221)
T ss_pred ----HHHcCCChH--He-EEEecchhHHHHHHHCCCE
Confidence 2332 3221 22 2699999999999999974
No 188
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=52.77 E-value=7.9 Score=38.33 Aligned_cols=14 Identities=21% Similarity=0.321 Sum_probs=12.5
Q ss_pred EEEEecCCcccccc
Q 001552 854 IVISDVDGTITKSD 867 (1055)
Q Consensus 854 IVISDIDGTITKSD 867 (1055)
+||||.||||..|.
T Consensus 2 ~viFDlDGTL~ds~ 15 (184)
T TIGR01993 2 VWFFDLDNTLYPHS 15 (184)
T ss_pred eEEEeCCCCCCCCc
Confidence 69999999999874
No 189
>PRK13189 peroxiredoxin; Provisional
Probab=51.55 E-value=1.3e+02 Score=32.12 Aligned_cols=104 Identities=19% Similarity=0.308 Sum_probs=59.3
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccC-CcCCCCCceecCCCCCCccchhhhhccCchHHHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQD-GKALPDGPVVISPDGLFPSLFREVIRRAPHEFKIACL 960 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~-g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL 960 (1055)
.+..+++|..+++.|.+|+-+|.-+. ...+.|++.+.+. +..+| -|++.-+++
T Consensus 55 l~~l~~~~~ef~~~~v~VigvS~D~~---~~h~aw~~~~~~~~g~~i~-fPllsD~~~---------------------- 108 (222)
T PRK13189 55 FVAFQKRYDEFRELNTELIGLSIDQV---FSHIKWVEWIKEKLGVEIE-FPIIADDRG---------------------- 108 (222)
T ss_pred HHHHHHHHHHHHHcCCEEEEEECCCH---HHHHHHHHhHHHhcCcCcc-eeEEEcCcc----------------------
Confidence 45667888999999999999986432 2345666654432 33343 355554432
Q ss_pred HHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCCCcEEEECCCCceeeeccc---CCcchhhHHhhhccc
Q 001552 961 EDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPRGKIFIINPKGEVVVNHRV---DSKTYSSIHALVHGM 1028 (1055)
Q Consensus 961 ~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~sRIFiINpkGel~~e~~~---~~sSY~~L~dlVD~~ 1028 (1055)
.|...|.- .....+ +...--+|+|||+|.|+..... .-.++..+-.+++.+
T Consensus 109 -~ia~~ygv----~~~~~~------------~~~~r~tfIID~~G~Ir~~~~~~~~~gr~~~eilr~l~al 162 (222)
T PRK13189 109 -EIAKKLGM----ISPGKG------------TNTVRAVFIIDPKGIIRAILYYPQEVGRNMDEILRLVKAL 162 (222)
T ss_pred -HHHHHhCC----CccccC------------CCceeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 22223211 000111 1244568999999999754321 124677777777754
No 190
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=50.71 E-value=8.6 Score=39.08 Aligned_cols=18 Identities=11% Similarity=0.165 Sum_probs=15.8
Q ss_pred cCCCchhHHHHHhcCCCC
Q 001552 978 FGNRDTDEISYLKVGIPR 995 (1055)
Q Consensus 978 FGNR~TDv~AYraVGIP~ 995 (1055)
+|++..|+.+=+++|++.
T Consensus 165 igDs~~di~aA~~aG~~~ 182 (221)
T PRK10563 165 VDDSSAGAQSGIAAGMEV 182 (221)
T ss_pred EeCcHhhHHHHHHCCCEE
Confidence 788999999999999873
No 191
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=50.66 E-value=8.3 Score=39.42 Aligned_cols=17 Identities=29% Similarity=0.438 Sum_probs=14.4
Q ss_pred CCcEEEEecCCcccccc
Q 001552 851 NTRIVISDVDGTITKSD 867 (1055)
Q Consensus 851 ~dKIVISDIDGTITKSD 867 (1055)
.-|.||||+||||+.+.
T Consensus 6 ~~k~iiFD~DGTL~d~~ 22 (222)
T PRK10826 6 QILAAIFDMDGLLIDSE 22 (222)
T ss_pred cCcEEEEcCCCCCCcCH
Confidence 35789999999999774
No 192
>TIGR03137 AhpC peroxiredoxin. This gene contains two invariant cysteine residues, one near the N-terminus and one near the C-terminus, each followed immediately by a proline residue.
Probab=50.24 E-value=1.1e+02 Score=31.46 Aligned_cols=26 Identities=15% Similarity=0.261 Sum_probs=21.0
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchh
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAI 907 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpI 907 (1055)
-+..+++|.++.+.|.+|+-+|.-+-
T Consensus 51 l~~l~~~~~~~~~~gv~vi~VS~D~~ 76 (187)
T TIGR03137 51 LEDLADKYAELKKLGVEVYSVSTDTH 76 (187)
T ss_pred HHHHHHHHHHHHhcCCcEEEEeCCCH
Confidence 35667788899989999999997653
No 193
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=50.21 E-value=8.2 Score=40.39 Aligned_cols=25 Identities=28% Similarity=0.571 Sum_probs=18.9
Q ss_pred ccCCC-chhHHHHHhcCCCCCcEEEECCC
Q 001552 977 GFGNR-DTDEISYLKVGIPRGKIFIINPK 1004 (1055)
Q Consensus 977 GFGNR-~TDv~AYraVGIP~sRIFiINpk 1004 (1055)
-+|++ .+|+.+=+++|+.. |++ +..
T Consensus 185 ~VGD~~~~Di~~A~~aG~~~--i~v-~~~ 210 (238)
T PRK10748 185 HVGDDLTTDVAGAIRCGMQA--CWI-NPE 210 (238)
T ss_pred EEcCCcHHHHHHHHHCCCeE--EEE-cCC
Confidence 38888 59999999999965 544 443
No 194
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=50.03 E-value=7 Score=38.07 Aligned_cols=14 Identities=29% Similarity=0.434 Sum_probs=12.5
Q ss_pred EEEEecCCcccccc
Q 001552 854 IVISDVDGTITKSD 867 (1055)
Q Consensus 854 IVISDIDGTITKSD 867 (1055)
+||||+||||..+.
T Consensus 1 ~viFD~DGTL~D~~ 14 (175)
T TIGR01493 1 AMVFDVYGTLVDVH 14 (175)
T ss_pred CeEEecCCcCcccH
Confidence 48999999999876
No 195
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=48.17 E-value=45 Score=35.12 Aligned_cols=92 Identities=17% Similarity=0.144 Sum_probs=52.0
Q ss_pred CChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccc---hhhh-hccCch--
Q 001552 880 WSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSL---FREV-IRRAPH-- 953 (1055)
Q Consensus 880 WTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL---~REV-I~KkPe-- 953 (1055)
++.+|+..+++.+.++|+++ ++|..+..++... + ..+-.|+ ++.++ .++. ...||+
T Consensus 138 ~~~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~---~-------~~~~~g~-------~~~~i~~~g~~~~~~gKP~~~ 199 (242)
T TIGR01459 138 LDLDEFDELFAPIVARKIPN-ICANPDRGINQHG---I-------YRYGAGY-------YAELIKQLGGKVIYSGKPYPA 199 (242)
T ss_pred CCHHHHHHHHHHHHhCCCcE-EEECCCEeccCCC---c-------eEecccH-------HHHHHHHhCCcEecCCCCCHH
Confidence 88999999999999999997 7788655433211 1 1111222 12211 1122 234555
Q ss_pred HHHHHHHHHHHhhCCCCCCCEEEccCCC-chhHHHHHhcCCC
Q 001552 954 EFKIACLEDIKALFPSDCNPFYAGFGNR-DTDEISYLKVGIP 994 (1055)
Q Consensus 954 eFKIacL~dIk~LFP~~~nPFyAGFGNR-~TDv~AYraVGIP 994 (1055)
.|+.+ ++.+ ..-+. ...+ .+|++ .+|+.+-+++|+.
T Consensus 200 ~~~~~-~~~~-~~~~~-~~~~--~vGD~~~~Di~~a~~~G~~ 236 (242)
T TIGR01459 200 IFHKA-LKEC-SNIPK-NRML--MVGDSFYTDILGANRLGID 236 (242)
T ss_pred HHHHH-HHHc-CCCCc-ccEE--EECCCcHHHHHHHHHCCCe
Confidence 34432 3322 11111 1223 47889 6999999999985
No 196
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=47.91 E-value=7.5 Score=38.87 Aligned_cols=13 Identities=46% Similarity=0.741 Sum_probs=11.7
Q ss_pred EEEecCCcccccc
Q 001552 855 VISDVDGTITKSD 867 (1055)
Q Consensus 855 VISDIDGTITKSD 867 (1055)
||||+||||..|.
T Consensus 1 viFD~DGTL~Ds~ 13 (213)
T TIGR01449 1 VLFDLDGTLVDSA 13 (213)
T ss_pred CeecCCCccccCH
Confidence 6999999999875
No 197
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=47.15 E-value=10 Score=38.24 Aligned_cols=15 Identities=33% Similarity=0.454 Sum_probs=13.7
Q ss_pred cEEEEecCCcccccc
Q 001552 853 RIVISDVDGTITKSD 867 (1055)
Q Consensus 853 KIVISDIDGTITKSD 867 (1055)
|+||||.||||..++
T Consensus 3 k~viFDldGtL~d~~ 17 (211)
T TIGR02247 3 KAVIFDFGGVLLPSP 17 (211)
T ss_pred eEEEEecCCceecCH
Confidence 689999999999886
No 198
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=46.13 E-value=75 Score=37.89 Aligned_cols=86 Identities=17% Similarity=0.239 Sum_probs=59.1
Q ss_pred CCCChhhHHHHHHHHHHcCC-eEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCchHHH
Q 001552 878 VDWSQTGVAHLFSAIKENGY-QLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFK 956 (1055)
Q Consensus 878 kDWTH~GVAkLYskI~~NGY-kILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFK 956 (1055)
.|-..+|+.++.+.+++.|+ ++.-+|+.+...+...-+-| +++ ..|... .| .-|
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~l--------gi~---------~~f~~~-------~p-~~K 414 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVAREL--------GID---------EVHAEL-------LP-EDK 414 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHc--------CCh---------hhhhcc-------Cc-HHH
Confidence 35667999999999999999 99999998765444333332 332 122111 12 236
Q ss_pred HHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCC
Q 001552 957 IACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGI 993 (1055)
Q Consensus 957 IacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGI 993 (1055)
.+.++.++... --.+.+|+..+|+.|-+++|+
T Consensus 415 ~~~i~~l~~~~-----~~v~~vGDg~nD~~al~~A~v 446 (536)
T TIGR01512 415 LEIVKELREKY-----GPVAMVGDGINDAPALAAADV 446 (536)
T ss_pred HHHHHHHHhcC-----CEEEEEeCCHHHHHHHHhCCE
Confidence 77777777541 234569999999999999996
No 199
>PF13464 DUF4115: Domain of unknown function (DUF4115)
Probab=45.58 E-value=25 Score=31.47 Aligned_cols=25 Identities=28% Similarity=0.604 Sum_probs=22.1
Q ss_pred cCCceEeccccccccccCCcEEEEEECCeecce
Q 001552 43 SSPWYVRFGKFQGVLKTKEKVVTINVNGVDANF 75 (1055)
Q Consensus 43 sSPFHVRFGK~qgvLr~~eK~V~i~VNG~~~~~ 75 (1055)
-.||.||+|+.. .|+|.+||+++++
T Consensus 37 ~~~~~i~iGna~--------~v~v~~nG~~~~~ 61 (77)
T PF13464_consen 37 KEPFRIRIGNAG--------AVEVTVNGKPVDL 61 (77)
T ss_pred CCCEEEEEeCCC--------cEEEEECCEECCC
Confidence 579999999985 3899999999987
No 200
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=44.11 E-value=90 Score=39.62 Aligned_cols=103 Identities=17% Similarity=0.192 Sum_probs=68.5
Q ss_pred CCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchh----------hh
Q 001552 878 VDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFR----------EV 947 (1055)
Q Consensus 878 kDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~R----------EV 947 (1055)
.|..++|+.+....+++.|+++.-+|+-...-|.....-+ ++.. +.+.++.-. -+..+.. .|
T Consensus 526 ~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~-Gi~~-----~~~~~v~g~--~l~~~~~~~l~~~~~~~~V 597 (884)
T TIGR01522 526 NDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRL-GMPS-----KTSQSVSGE--KLDAMDDQQLSQIVPKVAV 597 (884)
T ss_pred cCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCCC-----CCCceeEhH--HhHhCCHHHHHHHhhcCeE
Confidence 5888999999999999999999999999887777666555 1211 111111100 0001110 12
Q ss_pred hccCchHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCC
Q 001552 948 IRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGI 993 (1055)
Q Consensus 948 I~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGI 993 (1055)
..+-..+-|..+++.++.. .-.++..|+..+|+-|-++++|
T Consensus 598 far~~P~~K~~iv~~lq~~-----g~~v~mvGDGvND~pAl~~AdV 638 (884)
T TIGR01522 598 FARASPEHKMKIVKALQKR-----GDVVAMTGDGVNDAPALKLADI 638 (884)
T ss_pred EEECCHHHHHHHHHHHHHC-----CCEEEEECCCcccHHHHHhCCe
Confidence 2333346688888888865 2457789999999999999864
No 201
>PTZ00445 p36-lilke protein; Provisional
Probab=43.59 E-value=1.2e+02 Score=33.48 Aligned_cols=140 Identities=16% Similarity=0.089 Sum_probs=79.6
Q ss_pred EecCCCcEEEEecCCcccccccccccccc-cCCCC---ChhhHHHHHHHHHHcCCeEEEEccchh------------hHH
Q 001552 847 LWKWNTRIVISDVDGTITKSDVLGQFMPL-VGVDW---SQTGVAHLFSAIKENGYQLLFLSARAI------------VQA 910 (1055)
Q Consensus 847 LW~~~dKIVISDIDGTITKSDvlGhIlP~-LGkDW---TH~GVAkLYskI~~NGYkILYLSARpI------------gqA 910 (1055)
|...+-|+|++|.|-||.--+.-|-.-|. -+.+. .-|..-.+..++.+.|.+|+-+|=.+- .=.
T Consensus 38 L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~ 117 (219)
T PTZ00445 38 LNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGD 117 (219)
T ss_pred HHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechH
Confidence 35667799999999998875655655553 11111 135577788999999999999986543 224
Q ss_pred HHHHHHHHhc------ccCCcCCCCCceecCCCCCCccchhhhhccCch-HHHHHHHHHHHhhCCCCCC-CEEEccCCCc
Q 001552 911 YHTRRFLFTL------KQDGKALPDGPVVISPDGLFPSLFREVIRRAPH-EFKIACLEDIKALFPSDCN-PFYAGFGNRD 982 (1055)
Q Consensus 911 d~TR~yL~~i------~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPe-eFKIacL~dIk~LFP~~~n-PFyAGFGNR~ 982 (1055)
.+.+.-|+.- ++-...-|+ .- -.+..++-+-..+|+ ..|.--|+.+..-+.-... -+| |+++.
T Consensus 118 ~li~~~lk~s~~~~~i~~~~~yyp~--~w-----~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LF--IDD~~ 188 (219)
T PTZ00445 118 RMVEAALKKSKCDFKIKKVYAYYPK--FW-----QEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILF--IDDDM 188 (219)
T ss_pred HHHHHHHHhcCccceeeeeeeeCCc--cc-----CChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEe--ecCCH
Confidence 4555555421 110111221 00 001112222344565 4565555666655533211 333 78888
Q ss_pred hhHHHHHhcCCCC
Q 001552 983 TDEISYLKVGIPR 995 (1055)
Q Consensus 983 TDv~AYraVGIP~ 995 (1055)
..+.+=+++|+..
T Consensus 189 ~NVeaA~~lGi~a 201 (219)
T PTZ00445 189 NNCKNALKEGYIA 201 (219)
T ss_pred HHHHHHHHCCCEE
Confidence 8888888888643
No 202
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=43.37 E-value=22 Score=41.87 Aligned_cols=78 Identities=17% Similarity=0.411 Sum_probs=54.3
Q ss_pred cCCCcEEEEecCCcccccccccccccccCCCCC--hhhHHHHHHHHHHcCCeEEEEccc-----hhhHHHHHHHHHHhcc
Q 001552 849 KWNTRIVISDVDGTITKSDVLGQFMPLVGVDWS--QTGVAHLFSAIKENGYQLLFLSAR-----AIVQAYHTRRFLFTLK 921 (1055)
Q Consensus 849 ~~~dKIVISDIDGTITKSDvlGhIlP~LGkDWT--H~GVAkLYskI~~NGYkILYLSAR-----pIgqAd~TR~yL~~i~ 921 (1055)
+.+.|++.||.||||.+.+. |.+.|.---||. ++-|..=+..+..+||+++.-|-- .-.-++.++.=.+.|.
T Consensus 72 ~~~~K~i~FD~dgtlI~t~s-g~vf~~~~~dw~~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~ 150 (422)
T KOG2134|consen 72 NGGSKIIMFDYDGTLIDTKS-GKVFPKGSMDWRILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIV 150 (422)
T ss_pred CCCcceEEEecCCceeecCC-cceeeccCccceeeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHH
Confidence 45789999999999998764 577776666775 777777777888999999988753 2233444444444444
Q ss_pred cCCcCCC
Q 001552 922 QDGKALP 928 (1055)
Q Consensus 922 Q~g~~LP 928 (1055)
.+ .++|
T Consensus 151 an-l~vP 156 (422)
T KOG2134|consen 151 AN-LGVP 156 (422)
T ss_pred Hh-cCCc
Confidence 43 4555
No 203
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=42.76 E-value=10 Score=38.25 Aligned_cols=26 Identities=4% Similarity=0.073 Sum_probs=18.8
Q ss_pred CCCchhHHHHHh----cCCCCCcEEEECCC
Q 001552 979 GNRDTDEISYLK----VGIPRGKIFIINPK 1004 (1055)
Q Consensus 979 GNR~TDv~AYra----VGIP~sRIFiINpk 1004 (1055)
+.+.-+...|.. .|+.+++++.|+-.
T Consensus 128 ~~~KP~~~~~~~~~~~~~~~~~~~l~igD~ 157 (205)
T TIGR01454 128 PRPKPAPDIVREALRLLDVPPEDAVMVGDA 157 (205)
T ss_pred CCCCCChHHHHHHHHHcCCChhheEEEcCC
Confidence 334556777776 58989998888765
No 204
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=42.63 E-value=14 Score=44.19 Aligned_cols=41 Identities=20% Similarity=0.222 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCCCcEEEECC
Q 001552 954 EFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPRGKIFIINP 1003 (1055)
Q Consensus 954 eFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~sRIFiINp 1003 (1055)
+-|...|+ ..+..+ .+-| |||++.+|..+-..++- -|.|++
T Consensus 175 e~Kv~rl~---~~~g~~-~~~~-aYgDS~sD~plL~~a~e----~y~V~~ 215 (497)
T PLN02177 175 DHKRDAVL---KEFGDA-LPDL-GLGDRETDHDFMSICKE----GYMVPR 215 (497)
T ss_pred HHHHHHHH---HHhCCC-CceE-EEECCccHHHHHHhCCc----cEEeCC
Confidence 34666665 444332 2334 89999999999887772 355555
No 205
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=41.94 E-value=69 Score=40.64 Aligned_cols=100 Identities=13% Similarity=0.127 Sum_probs=68.8
Q ss_pred CCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchh----------hh
Q 001552 878 VDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFR----------EV 947 (1055)
Q Consensus 878 kDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~R----------EV 947 (1055)
.|..++++.+..+.+++.|.+++-+|+-...-|.....-+ ++..+.+++-.+ +..+.. .|
T Consensus 513 ~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~l--------GI~~~~v~~g~~--l~~~~~~el~~~~~~~~v 582 (867)
T TIGR01524 513 LDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEV--------GIDANDFLLGAD--IEELSDEELARELRKYHI 582 (867)
T ss_pred eCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc--------CCCCCCeeecHh--hhhCCHHHHHHHhhhCeE
Confidence 5888999999999999999999999998776665554444 344444443321 111100 23
Q ss_pred hccCchHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcC
Q 001552 948 IRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVG 992 (1055)
Q Consensus 948 I~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVG 992 (1055)
..+-.-+-|..+++.++.. .-.+|..|+..||+-|-+++.
T Consensus 583 fAr~~Pe~K~~iV~~lq~~-----G~vVam~GDGvNDapALk~Ad 622 (867)
T TIGR01524 583 FARLTPMQKSRIIGLLKKA-----GHTVGFLGDGINDAPALRKAD 622 (867)
T ss_pred EEECCHHHHHHHHHHHHhC-----CCEEEEECCCcccHHHHHhCC
Confidence 3333446688888888864 346788999999998888754
No 206
>PLN02811 hydrolase
Probab=40.84 E-value=73 Score=32.86 Aligned_cols=98 Identities=18% Similarity=0.151 Sum_probs=54.0
Q ss_pred ChhhHHHHHHHHHHcCCeEEEEccchhhHHH-HHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhc--cCchHHHH
Q 001552 881 SQTGVAHLFSAIKENGYQLLFLSARAIVQAY-HTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIR--RAPHEFKI 957 (1055)
Q Consensus 881 TH~GVAkLYskI~~NGYkILYLSARpIgqAd-~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~--KkPeeFKI 957 (1055)
..+||.++.+.++++||++.-+|+....... .+..++. + ..+.+ .++. .+ -+++-. +.|+.|..
T Consensus 79 l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~-l----~~~f~-~i~~-~~------~~~~~~~KP~p~~~~~ 145 (220)
T PLN02811 79 LMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGE-L----FSLMH-HVVT-GD------DPEVKQGKPAPDIFLA 145 (220)
T ss_pred CCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHH-H----HhhCC-EEEE-CC------hhhccCCCCCcHHHHH
Confidence 3699999999999999999999986543221 1111110 0 01111 1222 22 012222 34445544
Q ss_pred HHHHHHHh-hCCCCCCCEEEccCCCchhHHHHHhcCCCC
Q 001552 958 ACLEDIKA-LFPSDCNPFYAGFGNRDTDEISYLKVGIPR 995 (1055)
Q Consensus 958 acL~dIk~-LFP~~~nPFyAGFGNR~TDv~AYraVGIP~ 995 (1055)
++ +++.. -+.+ ..-+ .+|++..|+.|=+++|++.
T Consensus 146 a~-~~~~~~~~~~-~~~v--~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 146 AA-RRFEDGPVDP-GKVL--VFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred HH-HHhCCCCCCc-cceE--EEeccHhhHHHHHHCCCeE
Confidence 43 22210 0222 2234 4999999999999999964
No 207
>PF10307 DUF2410: Hypothetical protein (DUF2410); InterPro: IPR018812 This entry represents a family of proteins conserved in fungi whose function is not known. There are two characteristic sequence motifs, GGWW and TGR.
Probab=40.19 E-value=1.8e+02 Score=31.56 Aligned_cols=100 Identities=18% Similarity=0.270 Sum_probs=73.9
Q ss_pred CCCCChhhHHHHHH-HHHHcCCeEEEEccch-hhHHHHHHHHHHhcccCCcCCCCCceecCCC-CCCccchhhhhccCch
Q 001552 877 GVDWSQTGVAHLFS-AIKENGYQLLFLSARA-IVQAYHTRRFLFTLKQDGKALPDGPVVISPD-GLFPSLFREVIRRAPH 953 (1055)
Q Consensus 877 GkDWTH~GVAkLYs-kI~~NGYkILYLSARp-IgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd-~Lf~AL~REVI~KkPe 953 (1055)
-++|=...|++|.+ .+++..---+-||+|. ..++...+.-|. ..+|--=-|.|.|. +.+ ...=
T Consensus 51 w~gwWNe~Iv~la~~S~~~~dtltVLLTGR~e~~F~~lI~~ml~-----s~~L~Fd~v~LKp~~~~~---------~sTm 116 (197)
T PF10307_consen 51 WEGWWNENIVELARLSMQDPDTLTVLLTGRRESKFSSLIERMLA-----SKGLEFDAVCLKPENQRF---------SSTM 116 (197)
T ss_pred ccchhhHHHHHHHHHhhcCCCeeEEEEeCCCchhHHHHHHHHHh-----cCCCCccEEEeCcccccC---------cccc
Confidence 45677899999997 4777788889999999 488888888874 44555445666664 111 1234
Q ss_pred HHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcC
Q 001552 954 EFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVG 992 (1055)
Q Consensus 954 eFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVG 992 (1055)
.||..+|.++...|+.- .-+ ..|.+|..=+..++..-
T Consensus 117 ~fK~~~l~~ll~~Y~~~-~eI-~IYeDR~~hvk~Fr~Ff 153 (197)
T PF10307_consen 117 DFKQAFLEDLLHTYKNA-EEI-RIYEDRPKHVKGFRDFF 153 (197)
T ss_pred HHHHHHHHHHHHhcCCC-CEE-EEEcCCHHHHHHHHHHH
Confidence 79999999999998753 233 37999999999998864
No 208
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=40.17 E-value=53 Score=41.38 Aligned_cols=61 Identities=16% Similarity=0.108 Sum_probs=40.5
Q ss_pred CCcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHc-CCeEEEEccchhhHHHHHHHHH
Q 001552 851 NTRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKEN-GYQLLFLSARAIVQAYHTRRFL 917 (1055)
Q Consensus 851 ~dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~N-GYkILYLSARpIgqAd~TR~yL 917 (1055)
..+++++|.||||+--.- ....| ..-.+++++.++.+.|.+. +..+.-+|+|+.. ....||
T Consensus 506 ~~rll~LDyDGTL~~~~~-~~~~p--~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~---~L~~~~ 567 (797)
T PLN03063 506 NNRLLILGFYGTLTEPRN-SQIKE--MDLGLHPELKETLKALCSDPKTTVVVLSRSGKD---ILDKNF 567 (797)
T ss_pred cCeEEEEecCccccCCCC-Ccccc--ccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHH---HHHHHh
Confidence 457899999999993100 00011 1124578999999988876 6888889999764 344555
No 209
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=40.08 E-value=54 Score=42.31 Aligned_cols=62 Identities=15% Similarity=0.126 Sum_probs=41.8
Q ss_pred CCcEEEEecCCcccccccc-----cccccccCCCCChhhHHHHHHHHHHc-CCeEEEEccchhhHHHHHHHHH
Q 001552 851 NTRIVISDVDGTITKSDVL-----GQFMPLVGVDWSQTGVAHLFSAIKEN-GYQLLFLSARAIVQAYHTRRFL 917 (1055)
Q Consensus 851 ~dKIVISDIDGTITKSDvl-----GhIlP~LGkDWTH~GVAkLYskI~~N-GYkILYLSARpIgqAd~TR~yL 917 (1055)
..+++++|.||||+--.-. .++.++ .-.+++++..+.+.|.+. +..+.-+|+|+... ...||
T Consensus 590 ~~RLlfLDyDGTLap~~~~P~~~~~~~~~~--~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~---Le~~f 657 (934)
T PLN03064 590 NNRLLILGFNATLTEPVDTPGRRGDQIKEM--ELRLHPELKEPLRALCSDPKTTIVVLSGSDRSV---LDENF 657 (934)
T ss_pred cceEEEEecCceeccCCCCccccccccccc--ccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHH---HHHHh
Confidence 4578999999999852100 011111 234679999999988775 78899999998653 34455
No 210
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=39.87 E-value=1.1e+02 Score=38.28 Aligned_cols=104 Identities=18% Similarity=0.180 Sum_probs=67.3
Q ss_pred CCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCC----CceecCCCCCCccc----hhh---
Q 001552 878 VDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPD----GPVVISPDGLFPSL----FRE--- 946 (1055)
Q Consensus 878 kDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~----GPVLLSPd~Lf~AL----~RE--- 946 (1055)
.|.+++++.+..+.+++.|.+++-||+....-|..+-.-+ +++. |.-+...+.+ ..+ ..+
T Consensus 440 ~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~l--------GI~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~ 510 (755)
T TIGR01647 440 FDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRL--------GLGTNIYTADVLLKGDNR-DDLPSGELGEMVE 510 (755)
T ss_pred cCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc--------CCCCCCcCHHHhcCCcch-hhCCHHHHHHHHH
Confidence 5888999999999999999999999999877666665544 2332 1111110000 000 001
Q ss_pred ---hhccCchHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhc--CCCC
Q 001552 947 ---VIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKV--GIPR 995 (1055)
Q Consensus 947 ---VI~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraV--GIP~ 995 (1055)
+..+-.-+-|..+++.++.. .-.+|--|+..||+-|-+++ ||..
T Consensus 511 ~~~vfAr~~Pe~K~~iV~~lq~~-----G~~VamvGDGvNDapAL~~AdVGIAm 559 (755)
T TIGR01647 511 DADGFAEVFPEHKYEIVEILQKR-----GHLVGMTGDGVNDAPALKKADVGIAV 559 (755)
T ss_pred hCCEEEecCHHHHHHHHHHHHhc-----CCEEEEEcCCcccHHHHHhCCeeEEe
Confidence 22222224599988888864 34678899999998888775 5554
No 211
>PTZ00253 tryparedoxin peroxidase; Provisional
Probab=38.97 E-value=1.6e+02 Score=30.49 Aligned_cols=25 Identities=12% Similarity=0.044 Sum_probs=21.5
Q ss_pred hhHHHHHHHHHHcCCeEEEEccchh
Q 001552 883 TGVAHLFSAIKENGYQLLFLSARAI 907 (1055)
Q Consensus 883 ~GVAkLYskI~~NGYkILYLSARpI 907 (1055)
...++++..+.+.|.+|+-+|..+.
T Consensus 57 ~~l~~~~~~f~~~g~~vv~IS~d~~ 81 (199)
T PTZ00253 57 IQFSDSVKRFNELNCEVLACSMDSE 81 (199)
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCCH
Confidence 4677899999999999999998654
No 212
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=38.48 E-value=1.3e+02 Score=37.56 Aligned_cols=88 Identities=16% Similarity=0.211 Sum_probs=66.4
Q ss_pred CCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCchHHHH
Q 001552 878 VDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFKI 957 (1055)
Q Consensus 878 kDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKI 957 (1055)
+|..++++.+.++.+++.|.+++-+|+-...-|.....-+ ++.+ ++.+-.-+-|.
T Consensus 439 ~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~el--------GI~~-----------------v~A~~~PedK~ 493 (673)
T PRK14010 439 KDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEA--------GVDR-----------------FVAECKPEDKI 493 (673)
T ss_pred ecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc--------CCce-----------------EEcCCCHHHHH
Confidence 4888999999999999999999999998777666665555 3331 11222345699
Q ss_pred HHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhc--CCCC
Q 001552 958 ACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKV--GIPR 995 (1055)
Q Consensus 958 acL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraV--GIP~ 995 (1055)
+.++.+++. .-.+|--|+..||+-|-+++ ||..
T Consensus 494 ~iV~~lQ~~-----G~~VaMtGDGvNDAPALa~ADVGIAM 528 (673)
T PRK14010 494 NVIREEQAK-----GHIVAMTGDGTNDAPALAEANVGLAM 528 (673)
T ss_pred HHHHHHHhC-----CCEEEEECCChhhHHHHHhCCEEEEe
Confidence 999988864 34677889999999988886 5544
No 213
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=38.14 E-value=77 Score=33.84 Aligned_cols=63 Identities=14% Similarity=0.171 Sum_probs=45.1
Q ss_pred CCCcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHH
Q 001552 850 WNTRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFL 917 (1055)
Q Consensus 850 ~~dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL 917 (1055)
.+-|++|-|+|+||..+-... .-+.-.-+||+-+|.+.+.+ .|.|+--||.....|...-.-|
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~----~~~~~~kRP~l~eFL~~~~~-~feIvVwTAa~~~ya~~~l~~l 81 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPA----ETGEELMRPYLHEFLTSAYE-DYDIVIWSATSMKWIEIKMTEL 81 (195)
T ss_pred CCCcEEEEeCCCceEcccccC----CCceEEeCCCHHHHHHHHHh-CCEEEEEecCCHHHHHHHHHHh
Confidence 466899999999999642211 12334557999999999988 6999999997665555544443
No 214
>cd02970 PRX_like2 Peroxiredoxin (PRX)-like 2 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a CXXC motif, similar to TRX. The second cysteine in the motif corresponds to the peroxidatic cysteine of PRX, however, these proteins do not contain the other two residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. TRXs alter the redox state of target proteins by catalyzing the reduction of their disulfide bonds via the CXXC motif using reducing equivalents derived from either NADPH or ferredoxins.
Probab=36.81 E-value=1.4e+02 Score=28.04 Aligned_cols=49 Identities=24% Similarity=0.346 Sum_probs=34.3
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCC
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGL 939 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~L 939 (1055)
.+...+++..+.+.|..|+-++.-... ..+.|.+ .+.+| .|++.-|++.
T Consensus 43 ~~~l~~~~~~~~~~~v~vv~V~~~~~~---~~~~~~~-----~~~~~-~p~~~D~~~~ 91 (149)
T cd02970 43 LRALSKLLPELDALGVELVAVGPESPE---KLEAFDK-----GKFLP-FPVYADPDRK 91 (149)
T ss_pred HHHHHHHHHHHHhcCeEEEEEeCCCHH---HHHHHHH-----hcCCC-CeEEECCchh
Confidence 356677888898899999999976542 2346664 34554 6888888753
No 215
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=35.80 E-value=16 Score=42.30 Aligned_cols=16 Identities=38% Similarity=0.634 Sum_probs=13.9
Q ss_pred cEEEEecCCccccccc
Q 001552 853 RIVISDVDGTITKSDV 868 (1055)
Q Consensus 853 KIVISDIDGTITKSDv 868 (1055)
+.||||+||||..|.-
T Consensus 242 k~vIFDlDGTLiDs~~ 257 (459)
T PRK06698 242 QALIFDMDGTLFQTDK 257 (459)
T ss_pred hheeEccCCceecchh
Confidence 6799999999998753
No 216
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=35.36 E-value=1e+02 Score=39.48 Aligned_cols=106 Identities=18% Similarity=0.213 Sum_probs=70.6
Q ss_pred ccC-CCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchh--------
Q 001552 875 LVG-VDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFR-------- 945 (1055)
Q Consensus 875 ~LG-kDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~R-------- 945 (1055)
.++ .|..++++.+..+.+++.|.+++-+|+=...-|...-.-+ ++..+.++.-.+ +..+..
T Consensus 544 li~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~l--------GI~~~~vi~G~e--l~~~~~~el~~~v~ 613 (903)
T PRK15122 544 FLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREV--------GLEPGEPLLGTE--IEAMDDAALAREVE 613 (903)
T ss_pred EEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc--------CCCCCCccchHh--hhhCCHHHHHHHhh
Confidence 444 5888999999999999999999999997665555554444 344344332211 111111
Q ss_pred --hhhccCchHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHh--cCCCC
Q 001552 946 --EVIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLK--VGIPR 995 (1055)
Q Consensus 946 --EVI~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYra--VGIP~ 995 (1055)
.|..+-.-+-|..+++.++.. .-.+|--|+..||+-|-++ |||..
T Consensus 614 ~~~VfAr~sPe~K~~iV~~Lq~~-----G~vVamtGDGvNDaPALk~ADVGIAm 662 (903)
T PRK15122 614 ERTVFAKLTPLQKSRVLKALQAN-----GHTVGFLGDGINDAPALRDADVGISV 662 (903)
T ss_pred hCCEEEEeCHHHHHHHHHHHHhC-----CCEEEEECCCchhHHHHHhCCEEEEe
Confidence 233333446699999988874 3467889999999888777 46654
No 217
>PF08534 Redoxin: Redoxin; InterPro: IPR013740 This redoxin domain is found in peroxiredoxin, thioredoxin and glutaredoxin proteins. Peroxiredoxins (Prxs) constitute a family of thiol peroxidases that reduce hydrogen peroxide, peroxinitrite, and hydroperoxides using a strictly conserved cysteine []. Chloroplast thioredoxin systems in plants regulate the enzymes involved in photosynthetic carbon assimilation []. It is thought that redoxins have a large role to play in anti-oxidant defence. Cadmium-sensitive proteins are also regulated via thioredoxin and glutaredoxin thiol redox systems [].; GO: 0016491 oxidoreductase activity; PDB: 2H30_A 1TP9_A 1Y25_A 1XVQ_A 2B1K_A 2G0F_A 2B1L_B 3K8N_A 1Z5Y_E 3OR5_A ....
Probab=35.34 E-value=2.2e+02 Score=27.21 Aligned_cols=58 Identities=24% Similarity=0.364 Sum_probs=38.5
Q ss_pred ecCC-ccccccccccc--ccccCCCCC------hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHH
Q 001552 858 DVDG-TITKSDVLGQF--MPLVGVDWS------QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLF 918 (1055)
Q Consensus 858 DIDG-TITKSDvlGhI--lP~LGkDWT------H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~ 918 (1055)
|.|| ++..++..|+. +-....-|. ++-+.+|+.+++++|..++.|++..... .++|+.
T Consensus 15 ~~~g~~~~l~~~~gk~~vv~f~~~~~Cp~C~~~~p~l~~l~~~~~~~~v~~v~v~~~~~~~---~~~~~~ 81 (146)
T PF08534_consen 15 DLDGKPVSLSDFKGKPVVVNFWASAWCPPCRKELPYLNELQEKYKDKGVDVVGVSSDDDPP---VREFLK 81 (146)
T ss_dssp ETTSEEEEGGGGTTSEEEEEEESTTTSHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSSHH---HHHHHH
T ss_pred cCCCCEecHHHhCCCeEEEEEEccCCCCcchhhhhhHHhhhhhhccCceEEEEecccCCHH---HHHHHH
Confidence 4667 45555555542 111222254 5566888888999999999999886665 788886
No 218
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=34.84 E-value=22 Score=35.90 Aligned_cols=27 Identities=15% Similarity=0.336 Sum_probs=20.2
Q ss_pred cCCCchhHHHHHh----cCCCCCcEEEECCC
Q 001552 978 FGNRDTDEISYLK----VGIPRGKIFIINPK 1004 (1055)
Q Consensus 978 FGNR~TDv~AYra----VGIP~sRIFiINpk 1004 (1055)
+|.+.-|+..|.. .|+++++++.|+-.
T Consensus 137 ~~~~KP~p~~~~~~~~~~~~~p~~~l~vgD~ 167 (199)
T PRK09456 137 LGMRKPEARIYQHVLQAEGFSAADAVFFDDN 167 (199)
T ss_pred cCCCCCCHHHHHHHHHHcCCChhHeEEeCCC
Confidence 6677778888865 48888888888743
No 219
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=34.18 E-value=1.6e+02 Score=36.87 Aligned_cols=88 Identities=17% Similarity=0.242 Sum_probs=63.5
Q ss_pred CCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCchHHHH
Q 001552 878 VDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFKI 957 (1055)
Q Consensus 878 kDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKI 957 (1055)
+|-.++|+.+.++.+++.|.+++-||+=...-|.....=+ ++.+ ++.+-.-+-|.
T Consensus 443 ~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~el--------GId~-----------------v~A~~~PedK~ 497 (679)
T PRK01122 443 KDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA--------GVDD-----------------FLAEATPEDKL 497 (679)
T ss_pred eccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc--------CCcE-----------------EEccCCHHHHH
Confidence 4778899999999999999999999996655444443333 3431 12222335699
Q ss_pred HHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhc--CCCC
Q 001552 958 ACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKV--GIPR 995 (1055)
Q Consensus 958 acL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraV--GIP~ 995 (1055)
++++.+++. .-.+|--|+..||+-|-+++ ||..
T Consensus 498 ~iV~~lQ~~-----G~~VaMtGDGvNDAPALa~ADVGIAM 532 (679)
T PRK01122 498 ALIRQEQAE-----GRLVAMTGDGTNDAPALAQADVGVAM 532 (679)
T ss_pred HHHHHHHHc-----CCeEEEECCCcchHHHHHhCCEeEEe
Confidence 999999875 24678899999999888875 5543
No 220
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=33.88 E-value=1.8e+02 Score=37.36 Aligned_cols=103 Identities=17% Similarity=0.137 Sum_probs=69.7
Q ss_pred CCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCC-C-CceecCCCCCCccch----h------
Q 001552 878 VDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALP-D-GPVVISPDGLFPSLF----R------ 945 (1055)
Q Consensus 878 kDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP-~-GPVLLSPd~Lf~AL~----R------ 945 (1055)
.|..++++.+....+++.|.+++-+|+-...-|..+..-+ ++. . +-++.-. . +..+. +
T Consensus 577 ~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~--------GI~~~~~~vi~G~-~-~~~l~~~el~~~i~~~ 646 (941)
T TIGR01517 577 KDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNC--------GILTFGGLAMEGK-E-FRRLVYEEMDPILPKL 646 (941)
T ss_pred cCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHc--------CCCCCCceEeeHH-H-hhhCCHHHHHHHhccC
Confidence 5888999999999999999999999999777666665554 221 1 1122111 0 11110 1
Q ss_pred hhhccCchHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhc--CCCC
Q 001552 946 EVIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKV--GIPR 995 (1055)
Q Consensus 946 EVI~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraV--GIP~ 995 (1055)
.|..+-.-+-|..+++.++.. ...+|.-|+..||+-|-+++ ||..
T Consensus 647 ~Vfar~sPe~K~~iV~~lq~~-----g~vVam~GDGvNDapALk~AdVGIAm 693 (941)
T TIGR01517 647 RVLARSSPLDKQLLVLMLKDM-----GEVVAVTGDGTNDAPALKLADVGFSM 693 (941)
T ss_pred eEEEECCHHHHHHHHHHHHHC-----CCEEEEECCCCchHHHHHhCCcceec
Confidence 133344446799999988874 24678999999999999885 6643
No 221
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=33.71 E-value=1.4e+02 Score=37.46 Aligned_cols=83 Identities=16% Similarity=0.119 Sum_probs=60.2
Q ss_pred CCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCchHHHH
Q 001552 878 VDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFKI 957 (1055)
Q Consensus 878 kDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKI 957 (1055)
.|-.++|+.+..+.+++.|+++..||+....-+......| | +. .. +. -.|+ -|.
T Consensus 566 ~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~l------g--i~---~~------~~--------~~p~-~K~ 619 (741)
T PRK11033 566 QDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGEL------G--ID---FR------AG--------LLPE-DKV 619 (741)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc------C--CC---ee------cC--------CCHH-HHH
Confidence 3666899999999999999999999999877666666655 2 32 00 10 1233 488
Q ss_pred HHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcC
Q 001552 958 ACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVG 992 (1055)
Q Consensus 958 acL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVG 992 (1055)
.+++.++.- .. ++-.|+..||+.|-++++
T Consensus 620 ~~v~~l~~~----~~--v~mvGDgiNDapAl~~A~ 648 (741)
T PRK11033 620 KAVTELNQH----AP--LAMVGDGINDAPAMKAAS 648 (741)
T ss_pred HHHHHHhcC----CC--EEEEECCHHhHHHHHhCC
Confidence 888887742 22 456899999999988875
No 222
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=33.51 E-value=19 Score=33.68 Aligned_cols=14 Identities=43% Similarity=0.769 Sum_probs=12.1
Q ss_pred EEEecCCccccccc
Q 001552 855 VISDVDGTITKSDV 868 (1055)
Q Consensus 855 VISDIDGTITKSDv 868 (1055)
||||+||||..++.
T Consensus 1 iifD~dgtL~d~~~ 14 (176)
T PF13419_consen 1 IIFDLDGTLVDTDP 14 (176)
T ss_dssp EEEESBTTTEEHHH
T ss_pred cEEECCCCcEeCHH
Confidence 79999999997664
No 223
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=33.50 E-value=1.2e+02 Score=32.93 Aligned_cols=26 Identities=19% Similarity=0.364 Sum_probs=20.2
Q ss_pred CChhhHHHHHHHHHHcCCeEEEEccch
Q 001552 880 WSQTGVAHLFSAIKENGYQLLFLSARA 906 (1055)
Q Consensus 880 WTH~GVAkLYskI~~NGYkILYLSARp 906 (1055)
++.+|+.+++..++++|+ ++.+|..+
T Consensus 143 ~~y~~i~~~l~~L~~~g~-~~i~Tn~d 168 (279)
T TIGR01452 143 FSYAKLREACAHLREPGC-LFVATNRD 168 (279)
T ss_pred CCHHHHHHHHHHHhcCCC-EEEEeCCC
Confidence 456999999999999998 44566654
No 224
>PRK00522 tpx lipid hydroperoxide peroxidase; Provisional
Probab=32.92 E-value=5.3e+02 Score=26.08 Aligned_cols=70 Identities=13% Similarity=0.117 Sum_probs=38.2
Q ss_pred EEEecCCc-ccccccccc-cccccCCCC-C------hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCc
Q 001552 855 VISDVDGT-ITKSDVLGQ-FMPLVGVDW-S------QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGK 925 (1055)
Q Consensus 855 VISDIDGT-ITKSDvlGh-IlP~LGkDW-T------H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~ 925 (1055)
.+-|.+|. ++.++..|+ ++=.....| + .+...++|.++ .|.+|+-+|.-.. ...+.|++ .+
T Consensus 28 ~l~~~~g~~v~l~~~~Gk~vvl~f~~s~~cp~C~~e~~~l~~~~~~~--~~~~vv~vs~D~~---~~~~~f~~-----~~ 97 (167)
T PRK00522 28 TLVANDLSDVSLADFAGKRKVLNIFPSIDTGVCATSVRKFNQEAAEL--DNTVVLCISADLP---FAQKRFCG-----AE 97 (167)
T ss_pred EEEcCCCcEEehHHhCCCEEEEEEEcCCCCCccHHHHHHHHHHHHHc--CCcEEEEEeCCCH---HHHHHHHH-----hC
Confidence 44566663 677776664 111222333 2 34445555554 4899999986432 33588885 35
Q ss_pred CCCCCceec
Q 001552 926 ALPDGPVVI 934 (1055)
Q Consensus 926 ~LP~GPVLL 934 (1055)
+++.-|++.
T Consensus 98 ~~~~~~~ls 106 (167)
T PRK00522 98 GLENVITLS 106 (167)
T ss_pred CCCCceEee
Confidence 566434444
No 225
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=32.75 E-value=1.5e+02 Score=30.02 Aligned_cols=90 Identities=16% Similarity=0.127 Sum_probs=50.3
Q ss_pred ChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCchHHHHHHH
Q 001552 881 SQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFKIACL 960 (1055)
Q Consensus 881 TH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIacL 960 (1055)
+.+++.++.+.++++||++.-+|+++...+...-+.+. + ..+.+ .++..+... ..+.|+.|+.++
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~g-l----~~~f~--~~~~~~~~~-------~KP~p~~~~~~~- 171 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHG-L----EILFP--VQIWMEDCP-------PKPNPEPLILAA- 171 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcC-c----hhhCC--EEEeecCCC-------CCcCHHHHHHHH-
Confidence 34567899999999999999999997665554433331 1 11222 222221111 123455555543
Q ss_pred HHHHhhCCCCCCCEEEccCCCchhHHHHHh
Q 001552 961 EDIKALFPSDCNPFYAGFGNRDTDEISYLK 990 (1055)
Q Consensus 961 ~dIk~LFP~~~nPFyAGFGNR~TDv~AYra 990 (1055)
+.+ .+ .+ ...+| +|++.+|+.|=++
T Consensus 172 ~~~-~~-~~-~~~i~--vGD~~~Di~aA~~ 196 (197)
T TIGR01548 172 KAL-GV-EA-CHAAM--VGDTVDDIITGRK 196 (197)
T ss_pred HHh-Cc-Cc-ccEEE--EeCCHHHHHHHHh
Confidence 322 11 12 23455 8899999987543
No 226
>PTZ00137 2-Cys peroxiredoxin; Provisional
Probab=30.97 E-value=2.5e+02 Score=31.36 Aligned_cols=101 Identities=15% Similarity=0.212 Sum_probs=58.2
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHh-cccC-CcCCCCCceecCCCCCCccchhhhhccCchHHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFT-LKQD-GKALPDGPVVISPDGLFPSLFREVIRRAPHEFKIAC 959 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~-i~Q~-g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIac 959 (1055)
-+...++|.++++.|..|+-+|.-.. ..-+.|... +++. ..++| -|++.-+++
T Consensus 118 l~~l~~~~~ef~~~gv~VigIS~Ds~---~~h~aw~~~~~~~~g~~~l~-fPlLsD~~~--------------------- 172 (261)
T PTZ00137 118 LLGFSERLKEFEERGVKVLGVSVDSP---FSHKAWKELDVRQGGVSPLK-FPLFSDISR--------------------- 172 (261)
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCH---HHHHHHHhhhhhhccccCcc-eEEEEcCCh---------------------
Confidence 36677899999999999999997442 234556542 2221 12343 355554421
Q ss_pred HHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCCCcEEEECCCCceeeecccC---CcchhhHHhhhcc
Q 001552 960 LEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPRGKIFIINPKGEVVVNHRVD---SKTYSSIHALVHG 1027 (1055)
Q Consensus 960 L~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~sRIFiINpkGel~~e~~~~---~sSY~~L~dlVD~ 1027 (1055)
.+...| |-.. ..|++.--+|+||++|.|+...... ..+...+-+.++.
T Consensus 173 --~iakay-----------Gv~~-------~~g~a~R~tFIID~dG~I~~~~~~~~~~gr~v~eiLr~l~a 223 (261)
T PTZ00137 173 --EVSKSF-----------GLLR-------DEGFSHRASVLVDKAGVVKHVAVYDLGLGRSVDETLRLFDA 223 (261)
T ss_pred --HHHHHc-----------CCCC-------cCCceecEEEEECCCCEEEEEEEeCCCCCCCHHHHHHHHHH
Confidence 233332 2110 0256777899999999998643211 2355555555553
No 227
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=30.88 E-value=28 Score=35.12 Aligned_cols=18 Identities=28% Similarity=0.471 Sum_probs=14.8
Q ss_pred CCcEEEEecCCccccccc
Q 001552 851 NTRIVISDVDGTITKSDV 868 (1055)
Q Consensus 851 ~dKIVISDIDGTITKSDv 868 (1055)
.-|+|+||+||||...+.
T Consensus 3 ~~k~i~FD~d~TL~d~~~ 20 (229)
T COG1011 3 MIKAILFDLDGTLLDFDS 20 (229)
T ss_pred ceeEEEEecCCcccccch
Confidence 357899999999998654
No 228
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=29.16 E-value=89 Score=35.77 Aligned_cols=63 Identities=22% Similarity=0.299 Sum_probs=41.7
Q ss_pred EEecCCCcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhc
Q 001552 846 YLWKWNTRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTL 920 (1055)
Q Consensus 846 YLW~~~dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i 920 (1055)
++|.. +.+|++|+|.||..+.-.. +-+.+.|.+-.+.+++.|.- +||= +.|-++..+.=|..+
T Consensus 117 ~~~~~-phVIVfDlD~TLItd~~~v--------~Ir~~~v~~sL~~Lk~~g~v-LvLW--SyG~~eHV~~sl~~~ 179 (297)
T PF05152_consen 117 LVWEP-PHVIVFDLDSTLITDEGDV--------RIRDPAVYDSLRELKEQGCV-LVLW--SYGNREHVRHSLKEL 179 (297)
T ss_pred ccCCC-CcEEEEECCCcccccCCcc--------ccCChHHHHHHHHHHHcCCE-EEEe--cCCCHHHHHHHHHHh
Confidence 34433 5699999999998764321 22348899999999999963 3332 235566667667533
No 229
>cd03014 PRX_Atyp2cys Peroxiredoxin (PRX) family, Atypical 2-cys PRX subfamily; composed of PRXs containing peroxidatic and resolving cysteines, similar to the homodimeric thiol specific antioxidant (TSA) protein also known as TRX-dependent thiol peroxidase (Tpx). Tpx is a bacterial periplasmic peroxidase which differs from other PRXs in that it shows substrate specificity toward alkyl hydroperoxides over hydrogen peroxide. As with all other PRXs, the peroxidatic cysteine (N-terminal) of Tpx is oxidized into a sulfenic acid intermediate upon reaction with peroxides. Tpx is able to resolve this intermediate by forming an intramolecular disulfide bond with a conserved C-terminal cysteine (the resolving cysteine), which can then be reduced by thioredoxin. This differs from the typical 2-cys PRX which resolves the oxidized cysteine by forming an intermolecular disulfide bond with the resolving cysteine from the other subunit of the homodimer. Atypical 2-cys PRX homodimers have a loop-based
Probab=28.04 E-value=5.4e+02 Score=24.56 Aligned_cols=59 Identities=14% Similarity=0.138 Sum_probs=33.9
Q ss_pred EEEecCC-ccccccccccc-ccccCCCC-------ChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHH
Q 001552 855 VISDVDG-TITKSDVLGQF-MPLVGVDW-------SQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLF 918 (1055)
Q Consensus 855 VISDIDG-TITKSDvlGhI-lP~LGkDW-------TH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~ 918 (1055)
-+.|.|| +++.++..|+. +=..-.-| ..+...++|.++ .|+.|+-+|.-. ....++|.+
T Consensus 10 ~l~~~~g~~~~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~~~vi~Is~d~---~~~~~~~~~ 77 (143)
T cd03014 10 TLVTSDLSEVSLADFAGKVKVISVFPSIDTPVCATQTKRFNKEAAKL--DNTVVLTISADL---PFAQKRWCG 77 (143)
T ss_pred EEECCCCcEEeHHHhCCCeEEEEEEcCCCCCcCHHHHHHHHHHHHhc--CCCEEEEEECCC---HHHHHHHHH
Confidence 4456665 56666666641 11111111 245666777775 389999998633 334588885
No 230
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=27.36 E-value=2.4e+02 Score=37.04 Aligned_cols=103 Identities=19% Similarity=0.189 Sum_probs=67.9
Q ss_pred CCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCc-----------eecCCCCCCccchh-
Q 001552 878 VDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGP-----------VVISPDGLFPSLFR- 945 (1055)
Q Consensus 878 kDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GP-----------VLLSPd~Lf~AL~R- 945 (1055)
.|..+++|.+..+.+++.|.+++-+|+....-|..+..=+ +|.... ..++-. -+..+..
T Consensus 644 ~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~--------Gi~~~~~~~~~~~~~~~~vitG~-~l~~l~~~ 714 (1053)
T TIGR01523 644 YDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEV--------GIIPPNFIHDRDEIMDSMVMTGS-QFDALSDE 714 (1053)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHc--------CCCCccccccccccccceeeehH-HhhhcCHH
Confidence 5888999999999999999999999999776666554444 232110 111100 0111110
Q ss_pred ---------hhhccCchHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhc--CCC
Q 001552 946 ---------EVIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKV--GIP 994 (1055)
Q Consensus 946 ---------EVI~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraV--GIP 994 (1055)
.|..+-.-+-|..+++.++.. ...++..|+..||+-|-+++ ||.
T Consensus 715 ~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~-----g~~Vam~GDGvNDapaLk~AdVGIA 769 (1053)
T TIGR01523 715 EVDDLKALCLVIARCAPQTKVKMIEALHRR-----KAFCAMTGDGVNDSPSLKMANVGIA 769 (1053)
T ss_pred HHHHHhhcCeEEEecCHHHHHHHHHHHHhc-----CCeeEEeCCCcchHHHHHhCCccEe
Confidence 123333446788888888875 24677899999999999886 554
No 231
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=26.62 E-value=5.9e+02 Score=24.59 Aligned_cols=96 Identities=13% Similarity=0.113 Sum_probs=49.9
Q ss_pred CCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCchHHH
Q 001552 877 GVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFK 956 (1055)
Q Consensus 877 GkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFK 956 (1055)
+-|+-.-|.--+-..++.+||+++||-.+ ....+..+...+ . ..--|.+|-. . ....+.=
T Consensus 8 ~gd~H~lG~~~~~~~l~~~G~~vi~lG~~-vp~e~~~~~a~~----~----~~d~V~iS~~--~---------~~~~~~~ 67 (122)
T cd02071 8 GLDGHDRGAKVIARALRDAGFEVIYTGLR-QTPEEIVEAAIQ----E----DVDVIGLSSL--S---------GGHMTLF 67 (122)
T ss_pred CCChhHHHHHHHHHHHHHCCCEEEECCCC-CCHHHHHHHHHH----c----CCCEEEEccc--c---------hhhHHHH
Confidence 33544445544555788999999999887 444444444442 1 1222333321 0 0111111
Q ss_pred HHHHHHHHhhCCCCCCCEEEccCCCch-hHHHHHhcCCC
Q 001552 957 IACLEDIKALFPSDCNPFYAGFGNRDT-DEISYLKVGIP 994 (1055)
Q Consensus 957 IacL~dIk~LFP~~~nPFyAGFGNR~T-Dv~AYraVGIP 994 (1055)
.+.++.|+..-++ .-++++|. +..+ +...|++.|+.
T Consensus 68 ~~~~~~L~~~~~~-~i~i~~GG-~~~~~~~~~~~~~G~d 104 (122)
T cd02071 68 PEVIELLRELGAG-DILVVGGG-IIPPEDYELLKEMGVA 104 (122)
T ss_pred HHHHHHHHhcCCC-CCEEEEEC-CCCHHHHHHHHHCCCC
Confidence 3345556665232 33555444 4444 47889999954
No 232
>PRK03147 thiol-disulfide oxidoreductase; Provisional
Probab=26.55 E-value=5.8e+02 Score=24.91 Aligned_cols=35 Identities=14% Similarity=0.322 Sum_probs=22.6
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLF 918 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~ 918 (1055)
.+.+.+++.++.+.+.+++.++.-. .....+.|++
T Consensus 80 ~~~l~~~~~~~~~~~~~vi~i~~d~--~~~~~~~~~~ 114 (173)
T PRK03147 80 MPYMNELYPKYKEKGVEIIAVNVDE--TELAVKNFVN 114 (173)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEcCC--CHHHHHHHHH
Confidence 3566677778877788888887632 2345555553
No 233
>cd02966 TlpA_like_family TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.
Probab=26.52 E-value=64 Score=27.83 Aligned_cols=36 Identities=19% Similarity=0.334 Sum_probs=23.1
Q ss_pred CEEEccCCCchhHHHHHhcCCCCCcEEEECCCCceeee
Q 001552 973 PFYAGFGNRDTDEISYLKVGIPRGKIFIINPKGEVVVN 1010 (1055)
Q Consensus 973 PFyAGFGNR~TDv~AYraVGIP~sRIFiINpkGel~~e 1010 (1055)
+|...+++...-..+|.-.++| .+|+||++|+|+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~P--~~~l~d~~g~v~~~ 113 (116)
T cd02966 78 TFPVLLDPDGELAKAYGVRGLP--TTFLIDRDGRIRAR 113 (116)
T ss_pred CcceEEcCcchHHHhcCcCccc--eEEEECCCCcEEEE
Confidence 3333466544455555555555 68999999998743
No 234
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=26.25 E-value=2.7e+02 Score=36.45 Aligned_cols=104 Identities=20% Similarity=0.285 Sum_probs=71.0
Q ss_pred CcEEEEecCCcccccccccccccccC-CCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCC
Q 001552 852 TRIVISDVDGTITKSDVLGQFMPLVG-VDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDG 930 (1055)
Q Consensus 852 dKIVISDIDGTITKSDvlGhIlP~LG-kDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~G 930 (1055)
.-+|..-|||+++- .++ .|-..++++...+.|+++|++.+-||+-.+.-|..+..=+ | +-
T Consensus 703 ~tvv~v~vn~~l~g---------v~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~V------G--i~-- 763 (951)
T KOG0207|consen 703 QTVVYVAVNGQLVG---------VFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQV------G--ID-- 763 (951)
T ss_pred ceEEEEEECCEEEE---------EEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhh------C--cc--
Confidence 33455556666553 222 3677899999999999999999999999888777766555 2 11
Q ss_pred ceecCCCCCCccchhhhhccCchHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhc--CCC
Q 001552 931 PVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKV--GIP 994 (1055)
Q Consensus 931 PVLLSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraV--GIP 994 (1055)
.. +-|+ .| +-|.+.+++|+.- . +-+|-.|+..||.-|-.++ ||.
T Consensus 764 -------~V----~aev---~P-~~K~~~Ik~lq~~----~-~~VaMVGDGINDaPALA~AdVGIa 809 (951)
T KOG0207|consen 764 -------NV----YAEV---LP-EQKAEKIKEIQKN----G-GPVAMVGDGINDAPALAQADVGIA 809 (951)
T ss_pred -------eE----Eecc---Cc-hhhHHHHHHHHhc----C-CcEEEEeCCCCccHHHHhhcccee
Confidence 00 1121 12 3488888888875 2 4457899999998888774 543
No 235
>COG1225 Bcp Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=25.04 E-value=4.2e+02 Score=27.91 Aligned_cols=69 Identities=23% Similarity=0.363 Sum_probs=42.8
Q ss_pred ecCC-cccccccccc-ccccc-CCCCChhh----HH---HHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCC
Q 001552 858 DVDG-TITKSDVLGQ-FMPLV-GVDWSQTG----VA---HLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKAL 927 (1055)
Q Consensus 858 DIDG-TITKSDvlGh-IlP~L-GkDWTH~G----VA---kLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~L 927 (1055)
|.|| ||+.||..|+ +.-+. =+||| || ++ ++|..+.+.|+.++=+|.-+.. ..+.|-. .++|
T Consensus 17 ~~~g~~v~Lsd~~Gk~VVLyFYPk~~T-pgCT~Ea~~Frd~~~ef~~~~a~V~GIS~Ds~~---~~~~F~~-----k~~L 87 (157)
T COG1225 17 DQDGETVSLSDLRGKPVVLYFYPKDFT-PGCTTEACDFRDLLEEFEKLGAVVLGISPDSPK---SHKKFAE-----KHGL 87 (157)
T ss_pred cCCCCEEehHHhcCCcEEEEECCCCCC-CcchHHHHHHHHHHHHHHhCCCEEEEEeCCCHH---HHHHHHH-----HhCC
Confidence 4566 7889999997 11111 24554 22 33 5667888999999999987654 4455553 4567
Q ss_pred CCCceecCC
Q 001552 928 PDGPVVISP 936 (1055)
Q Consensus 928 P~GPVLLSP 936 (1055)
| =|||-.+
T Consensus 88 ~-f~LLSD~ 95 (157)
T COG1225 88 T-FPLLSDE 95 (157)
T ss_pred C-ceeeECC
Confidence 6 3444443
No 236
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=24.62 E-value=4.1e+02 Score=31.48 Aligned_cols=146 Identities=17% Similarity=0.172 Sum_probs=82.6
Q ss_pred EEEecCCcccccccccccccccCCCCChhhHHHHHHHHH-HcCCeEEEEccchhhHHHHHHHHHHhccc-CCcCCCCCce
Q 001552 855 VISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIK-ENGYQLLFLSARAIVQAYHTRRFLFTLKQ-DGKALPDGPV 932 (1055)
Q Consensus 855 VISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~-~NGYkILYLSARpIgqAd~TR~yL~~i~Q-~g~~LP~GPV 932 (1055)
-|.=+|=++|-|+.-|+..|.= -.-.+..|+.+. ..|++=|.|-+-+-| .+..-.||.-+++ +...+|+.-+
T Consensus 156 SILvLDYsLt~~~~~~~~yPtQ-----L~qlv~~Y~~Lv~~~G~~nI~LmGDSAG-GnL~Ls~LqyL~~~~~~~~Pk~~i 229 (374)
T PF10340_consen 156 SILVLDYSLTSSDEHGHKYPTQ-----LRQLVATYDYLVESEGNKNIILMGDSAG-GNLALSFLQYLKKPNKLPYPKSAI 229 (374)
T ss_pred eEEEEeccccccccCCCcCchH-----HHHHHHHHHHHHhccCCCeEEEEecCcc-HHHHHHHHHHHhhcCCCCCCceeE
Confidence 3333566777767667766621 134678899888 889988888776443 3333344444444 4557999999
Q ss_pred ecCCCCCCccchhhhh-----ccCchHHHHHHHHHHHhhCCCC----CCCEEEccCCCch--hHHHHHhcCCCCCcEEEE
Q 001552 933 VISPDGLFPSLFREVI-----RRAPHEFKIACLEDIKALFPSD----CNPFYAGFGNRDT--DEISYLKVGIPRGKIFII 1001 (1055)
Q Consensus 933 LLSPd~Lf~AL~REVI-----~KkPeeFKIacL~dIk~LFP~~----~nPFyAGFGNR~T--Dv~AYraVGIP~sRIFiI 1001 (1055)
|+||=--.......-. ..+-+..-...+....+.|-.. ....+..|.|... |..-|+.+ ++...+|+|
T Consensus 230 LISPWv~l~~~~~~~~~~~~~n~~~D~l~~~~~~~~~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I-~~~~~vfVi 308 (374)
T PF10340_consen 230 LISPWVNLVPQDSQEGSSYHDNEKRDMLSYKGLSMFGDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDI-LKKYSVFVI 308 (374)
T ss_pred EECCCcCCcCCCCCCCccccccccccccchhhHHHHHHhhccccccccccccCCccCcccCCChhHHHHh-ccCCcEEEE
Confidence 9999542221110000 0001111122233344444332 1123345667666 88999999 888899998
Q ss_pred CCCCce
Q 001552 1002 NPKGEV 1007 (1055)
Q Consensus 1002 NpkGel 1007 (1055)
=-..|+
T Consensus 309 ~Ge~Ev 314 (374)
T PF10340_consen 309 YGEDEV 314 (374)
T ss_pred ECCccc
Confidence 444444
No 237
>PRK10856 cytoskeletal protein RodZ; Provisional
Probab=24.57 E-value=55 Score=37.37 Aligned_cols=28 Identities=18% Similarity=0.468 Sum_probs=23.4
Q ss_pred cCCceEeccccccccccCCcEEEEEECCeecceeee
Q 001552 43 SSPWYVRFGKFQGVLKTKEKVVTINVNGVDANFNMY 78 (1055)
Q Consensus 43 sSPFHVRFGK~qgvLr~~eK~V~i~VNG~~~~~~Mk 78 (1055)
..||.|++|... .|+|++||+++++.=+
T Consensus 290 ~~p~~v~iG~~~--------~v~i~~nG~~vdl~~~ 317 (331)
T PRK10856 290 QAPYKLKIGAPA--------AVQIQYQGKPVDLSRF 317 (331)
T ss_pred CceEEEEEcCCC--------ceEEEECCEEccCCcc
Confidence 359999999985 3899999999998643
No 238
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=24.08 E-value=4.1e+02 Score=31.30 Aligned_cols=82 Identities=22% Similarity=0.267 Sum_probs=61.9
Q ss_pred CCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchhhhhccCchHHHH
Q 001552 878 VDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFREVIRRAPHEFKI 957 (1055)
Q Consensus 878 kDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKI 957 (1055)
.|-.++++......+++.|++++-+|+....-+..+...+ | + + .+-..+.|.
T Consensus 345 ~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~l------g--i------------~--------~~~~p~~K~ 396 (499)
T TIGR01494 345 EDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKEL------G--I------------F--------ARVTPEEKA 396 (499)
T ss_pred cCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc------C--c------------e--------eccCHHHHH
Confidence 3666799999999999999999999999988888888877 2 1 1 112235588
Q ss_pred HHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcC
Q 001552 958 ACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVG 992 (1055)
Q Consensus 958 acL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVG 992 (1055)
++++.++.. + -..+.-|+..+|+.|-++++
T Consensus 397 ~~v~~l~~~----g-~~v~~vGDg~nD~~al~~Ad 426 (499)
T TIGR01494 397 ALVEALQKK----G-RVVAMTGDGVNDAPALKKAD 426 (499)
T ss_pred HHHHHHHHC----C-CEEEEECCChhhHHHHHhCC
Confidence 888887654 1 34567888899998888764
No 239
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=23.99 E-value=1.3e+02 Score=32.55 Aligned_cols=30 Identities=13% Similarity=0.172 Sum_probs=25.0
Q ss_pred CCChhhHHHHHHHHHHcCCeEEEEccchhh
Q 001552 879 DWSQTGVAHLFSAIKENGYQLLFLSARAIV 908 (1055)
Q Consensus 879 DWTH~GVAkLYskI~~NGYkILYLSARpIg 908 (1055)
.++.+++.+.++.+++.|++++..|+.+..
T Consensus 119 ~~~y~~l~~a~~~L~~~~~~~~iatn~~~~ 148 (257)
T TIGR01458 119 HFSYQILNQAFRLLLDGAKPLLIAIGKGRY 148 (257)
T ss_pred ccCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 356899999999999999999998876543
No 240
>PRK15000 peroxidase; Provisional
Probab=23.96 E-value=4.9e+02 Score=27.46 Aligned_cols=102 Identities=13% Similarity=0.174 Sum_probs=58.6
Q ss_pred hhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhccc-CCc-CCCCCceecCCCCCCccchhhhhccCchHHHHHH
Q 001552 882 QTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQ-DGK-ALPDGPVVISPDGLFPSLFREVIRRAPHEFKIAC 959 (1055)
Q Consensus 882 H~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q-~g~-~LP~GPVLLSPd~Lf~AL~REVI~KkPeeFKIac 959 (1055)
.+..+++|.+++++|.+|+-+|.-..- .-+.|.+.+.+ .+. .+ .-|++.-+++
T Consensus 54 l~~l~~~~~~f~~~g~~vigvS~D~~~---~~~~w~~~~~~~~g~~~i-~fpllsD~~~--------------------- 108 (200)
T PRK15000 54 LIAFDKRYEEFQKRGVEVVGVSFDSEF---VHNAWRNTPVDKGGIGPV-KYAMVADVKR--------------------- 108 (200)
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCHH---HHHHHHhhHHHhCCcccc-CceEEECCCc---------------------
Confidence 366788999999999999999976432 22455443222 222 23 2456554432
Q ss_pred HHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCCCCcEEEECCCCceeeeccc---CCcchhhHHhhhcc
Q 001552 960 LEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPRGKIFIINPKGEVVVNHRV---DSKTYSSIHALVHG 1027 (1055)
Q Consensus 960 L~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP~sRIFiINpkGel~~e~~~---~~sSY~~L~dlVD~ 1027 (1055)
.+...| |-... ..|+..--.|+|||+|.|+..... ...++..+-++++.
T Consensus 109 --~ia~~y-----------gv~~~------~~g~~~r~tfiID~~G~I~~~~~~~~~~gr~~~eilr~l~a 160 (200)
T PRK15000 109 --EIQKAY-----------GIEHP------DEGVALRGSFLIDANGIVRHQVVNDLPLGRNIDEMLRMVDA 160 (200)
T ss_pred --HHHHHc-----------CCccC------CCCcEEeEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHH
Confidence 222222 11110 125566788999999999864321 12456666666654
No 241
>COG1654 BirA Biotin operon repressor [Transcription]
Probab=23.34 E-value=72 Score=29.95 Aligned_cols=39 Identities=23% Similarity=0.443 Sum_probs=32.5
Q ss_pred ChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCC
Q 001552 881 SQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPD 937 (1055)
Q Consensus 881 TH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd 937 (1055)
+...|-|.-..|++.||.|. .+.++|+.||.+|.++.+.
T Consensus 32 SRtaVwK~Iq~Lr~~G~~I~------------------s~~~kGY~L~~~~~ll~~~ 70 (79)
T COG1654 32 SRTAVWKHIQQLREEGVDIE------------------SVRGKGYLLPQLPDLLPQE 70 (79)
T ss_pred cHHHHHHHHHHHHHhCCceE------------------ecCCCceeccCccccCcHH
Confidence 46788899999999999998 4556799999999888653
No 242
>PRK10382 alkyl hydroperoxide reductase subunit C; Provisional
Probab=23.00 E-value=4.2e+02 Score=27.91 Aligned_cols=33 Identities=12% Similarity=0.251 Sum_probs=24.9
Q ss_pred hhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHH
Q 001552 883 TGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLF 918 (1055)
Q Consensus 883 ~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~ 918 (1055)
+...+++.++.+.|..++-+|.-+. ..-+.|.+
T Consensus 52 ~~l~~~~~~f~~~g~~vigIS~D~~---~~~~a~~~ 84 (187)
T PRK10382 52 GDVADHYEELQKLGVDVYSVSTDTH---FTHKAWHS 84 (187)
T ss_pred HHHHHHHHHHHhCCCEEEEEeCCCH---HHHHHHHH
Confidence 5677889999999999999996443 34566664
No 243
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=22.74 E-value=1e+02 Score=35.50 Aligned_cols=58 Identities=17% Similarity=0.300 Sum_probs=41.2
Q ss_pred cEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCc
Q 001552 853 RIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGK 925 (1055)
Q Consensus 853 KIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~ 925 (1055)
-.||||-||-|..- +-+-||+++.++.|+..|-+++++|--+. ..-++|++.++.-|.
T Consensus 23 DtfifDcDGVlW~g------------~~~ipGs~e~l~~L~~~gK~i~fvTNNSt---ksr~~y~kK~~~lG~ 80 (306)
T KOG2882|consen 23 DTFIFDCDGVLWLG------------EKPIPGSPEALNLLKSLGKQIIFVTNNST---KSREQYMKKFAKLGF 80 (306)
T ss_pred CEEEEcCCcceeec------------CCCCCChHHHHHHHHHcCCcEEEEeCCCc---chHHHHHHHHHHhCc
Confidence 34999999999861 22359999999999999999999997643 233444444433343
No 244
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=22.33 E-value=1.1e+02 Score=35.90 Aligned_cols=73 Identities=18% Similarity=0.186 Sum_probs=48.6
Q ss_pred cCCCcEEEEecCCcccccccccccccccCCCCChhhHHHHHHHHHHc----CCeEEEEccchhhHHHHHHHHHHhcccCC
Q 001552 849 KWNTRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKEN----GYQLLFLSARAIVQAYHTRRFLFTLKQDG 924 (1055)
Q Consensus 849 ~~~dKIVISDIDGTITKSDvlGhIlP~LGkDWTH~GVAkLYskI~~N----GYkILYLSARpIgqAd~TR~yL~~i~Q~g 924 (1055)
...+-++.+||||-|.+ || -+-+|+.+.++.|.+| -.++++||.-.-...+.-.+.|. .+-+
T Consensus 32 s~~~fgfafDIDGVL~R----G~--------~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS--~~Lg 97 (389)
T KOG1618|consen 32 SPPTFGFAFDIDGVLFR----GH--------RPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELS--ALLG 97 (389)
T ss_pred CCCceeEEEecccEEEe----cC--------CCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHH--HhhC
Confidence 34556799999999986 32 2348899999999999 68999999754333333334443 2236
Q ss_pred cCCCCCceecC
Q 001552 925 KALPDGPVVIS 935 (1055)
Q Consensus 925 ~~LP~GPVLLS 935 (1055)
..++.=-|+.|
T Consensus 98 v~Vs~dqviqS 108 (389)
T KOG1618|consen 98 VEVSADQVIQS 108 (389)
T ss_pred CccCHHHHHhh
Confidence 66765555554
No 245
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=21.91 E-value=49 Score=40.07 Aligned_cols=79 Identities=13% Similarity=0.193 Sum_probs=39.6
Q ss_pred HHHcCCeEEEEccchhh-HHHHHHHHHHhcccCCcCCCCCcee-cCCCCCCccchhhhhccCchHHHHHHHHHHHhhCCC
Q 001552 892 IKENGYQLLFLSARAIV-QAYHTRRFLFTLKQDGKALPDGPVV-ISPDGLFPSLFREVIRRAPHEFKIACLEDIKALFPS 969 (1055)
Q Consensus 892 I~~NGYkILYLSARpIg-qAd~TR~yL~~i~Q~g~~LP~GPVL-LSPd~Lf~AL~REVI~KkPeeFKIacL~dIk~LFP~ 969 (1055)
++..| +.+-+||-|-- ...-.|+|| |...=-|.=| ..-.+.+..+...+ .-++.|.. .++++|..
T Consensus 105 ~~~~g-~~vVVTAsPrvmVEpFake~L------G~D~VvGTEL~v~~~G~~TG~~~G~---n~~ek~~~---rl~~~~g~ 171 (498)
T PLN02499 105 FSSCD-KRVVVTRMPRVMVERFAKEHL------RADEVIGSELVVNRFGFATGFIRGT---DVDQSVAN---RVANLFVD 171 (498)
T ss_pred HHcCC-eEEEEeCCHHHHHHHHHHHhc------CCceEEeeeEEEeeccEEEEEEecC---ccHHHHHH---HHHHHhCc
Confidence 45677 88888887654 344555555 2221113322 22124444444432 22333344 45566654
Q ss_pred CCCCEEEccCCCchhH
Q 001552 970 DCNPFYAGFGNRDTDE 985 (1055)
Q Consensus 970 ~~nPFyAGFGNR~TDv 985 (1055)
. .| +-|+|.+.+|-
T Consensus 172 ~-~~-~vg~~~~~~~~ 185 (498)
T PLN02499 172 E-RP-QLGLGRISASS 185 (498)
T ss_pred c-Cc-eecccCCcccc
Confidence 2 34 55899887554
No 246
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=21.73 E-value=3.3e+02 Score=35.20 Aligned_cols=103 Identities=19% Similarity=0.195 Sum_probs=68.5
Q ss_pred CCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccCCcCCCCCceecCCCCCCccchh----------hh
Q 001552 878 VDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQDGKALPDGPVVISPDGLFPSLFR----------EV 947 (1055)
Q Consensus 878 kDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~g~~LP~GPVLLSPd~Lf~AL~R----------EV 947 (1055)
.|.+.+++.+..+.+++.|.+++-+|+=...-|...-.=+ ++..+.++.-.+ +..+.. .|
T Consensus 548 ~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~l--------GI~~~~v~~G~e--l~~l~~~el~~~~~~~~V 617 (902)
T PRK10517 548 LDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEV--------GLDAGEVLIGSD--IETLSDDELANLAERTTL 617 (902)
T ss_pred hCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc--------CCCccCceeHHH--HHhCCHHHHHHHHhhCcE
Confidence 5888999999999999999999999997655554444333 343333333211 111111 23
Q ss_pred hccCchHHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhc--CCCC
Q 001552 948 IRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKV--GIPR 995 (1055)
Q Consensus 948 I~KkPeeFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraV--GIP~ 995 (1055)
..+-.-+-|..+++.++.. .-.+|--|+..||+-|-+++ ||..
T Consensus 618 fAr~sPe~K~~IV~~Lq~~-----G~vVam~GDGvNDaPALk~ADVGIAm 662 (902)
T PRK10517 618 FARLTPMHKERIVTLLKRE-----GHVVGFMGDGINDAPALRAADIGISV 662 (902)
T ss_pred EEEcCHHHHHHHHHHHHHC-----CCEEEEECCCcchHHHHHhCCEEEEe
Confidence 3333446699999988874 34677899999998888875 5554
No 247
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=21.45 E-value=1.2e+02 Score=33.34 Aligned_cols=66 Identities=18% Similarity=0.254 Sum_probs=43.6
Q ss_pred cEEEEecCCcccc-ccccccccc--------ccCCCCChhhHHHHHHHHHHcCCeEEEEccchhhHHHHHHHHHHhcccC
Q 001552 853 RIVISDVDGTITK-SDVLGQFMP--------LVGVDWSQTGVAHLFSAIKENGYQLLFLSARAIVQAYHTRRFLFTLKQD 923 (1055)
Q Consensus 853 KIVISDIDGTITK-SDvlGhIlP--------~LGkDWTH~GVAkLYskI~~NGYkILYLSARpIgqAd~TR~yL~~i~Q~ 923 (1055)
|.+.-||.||+.- |=|.-.++| .+.++|-|+-|++....+.+- ++++........-+|+||.++
T Consensus 5 kaiLlDIEGTv~~iSFVkdvlFPYa~~~lp~fv~e~~e~~~v~~~v~~v~~e-------~g~~~s~E~lva~~~~wiaed 77 (229)
T COG4229 5 KAILLDIEGTVSPISFVKDVLFPYAARKLPDFVRENTEDSEVKKIVDEVLSE-------FGIANSEEALVALLLEWIAED 77 (229)
T ss_pred hhheeeccccccchhHHHhhhhHHHHHHhHHHHHhhccCChhhHHHHHHHHH-------hCccchHHHHHHHHHHHHhcc
Confidence 6788999999874 223334555 457788888888877765432 345555566666677777765
Q ss_pred Cc
Q 001552 924 GK 925 (1055)
Q Consensus 924 g~ 925 (1055)
.+
T Consensus 78 ~K 79 (229)
T COG4229 78 SK 79 (229)
T ss_pred cc
Confidence 54
No 248
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=20.24 E-value=83 Score=33.12 Aligned_cols=40 Identities=10% Similarity=0.086 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhhCCCCCCCEEEccCCCchhHHHHHhcCCC
Q 001552 954 EFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIP 994 (1055)
Q Consensus 954 eFKIacL~dIk~LFP~~~nPFyAGFGNR~TDv~AYraVGIP 994 (1055)
.=|-..|+.|+..+.-.....+ +||+..||+.+.+.+|+.
T Consensus 195 vsKg~al~~l~~~~gi~~~~v~-afGD~~NDi~Ml~~ag~~ 234 (270)
T PRK10513 195 VNKGTGVKSLAEHLGIKPEEVM-AIGDQENDIAMIEYAGVG 234 (270)
T ss_pred CChHHHHHHHHHHhCCCHHHEE-EECCchhhHHHHHhCCce
Confidence 5588889999888765433454 999999999999999963
Done!