Query 001557
Match_columns 1054
No_of_seqs 686 out of 4279
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 03:46:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001557.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001557hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR02468 sucrsPsyn_pln sucros 100.0 2E-209 3E-214 1897.4 90.7 1041 1-1049 1-1050(1050)
2 TIGR02470 sucr_synth sucrose s 100.0 1.4E-55 3.1E-60 533.2 42.9 468 154-664 245-745 (784)
3 PLN00142 sucrose synthase 100.0 1.5E-54 3.3E-59 523.7 38.3 460 163-664 277-768 (815)
4 TIGR02472 sucr_P_syn_N sucrose 100.0 6.4E-52 1.4E-56 490.8 43.4 436 166-665 1-439 (439)
5 PRK14501 putative bifunctional 100.0 3.2E-49 6.9E-54 492.1 42.5 569 269-1004 91-703 (726)
6 PLN03063 alpha,alpha-trehalose 100.0 7.5E-47 1.6E-51 469.1 43.5 542 289-996 135-722 (797)
7 PLN02205 alpha,alpha-trehalose 100.0 1.1E-44 2.3E-49 449.0 42.3 559 288-995 187-801 (854)
8 PLN03064 alpha,alpha-trehalose 100.0 3.5E-44 7.5E-49 441.0 42.6 547 289-995 219-811 (934)
9 PLN02939 transferase, transfer 100.0 8.9E-41 1.9E-45 404.8 43.6 518 75-670 408-970 (977)
10 PRK00654 glgA glycogen synthas 100.0 1.5E-39 3.2E-44 387.9 38.2 444 166-669 1-465 (466)
11 PLN02316 synthase/transferase 100.0 6.6E-39 1.4E-43 396.1 42.7 424 162-668 584-1035(1036)
12 TIGR03449 mycothiol_MshA UDP-N 100.0 1E-38 2.2E-43 374.5 39.9 402 168-668 1-403 (405)
13 PRK14099 glycogen synthase; Pr 100.0 1.8E-38 3.8E-43 378.1 39.9 453 164-670 2-482 (485)
14 TIGR02095 glgA glycogen/starch 100.0 1.4E-38 2.9E-43 380.9 36.6 447 166-667 1-473 (473)
15 PRK14098 glycogen synthase; Pr 100.0 2.2E-38 4.7E-43 377.7 33.7 451 166-668 6-487 (489)
16 cd03800 GT1_Sucrose_synthase T 100.0 1.1E-37 2.3E-42 363.4 38.5 395 167-661 1-397 (398)
17 KOG0853 Glycosyltransferase [C 100.0 9.1E-41 2E-45 380.7 12.0 481 114-707 1-494 (495)
18 PRK10307 putative glycosyl tra 100.0 1E-36 2.2E-41 358.6 42.2 398 166-669 1-410 (412)
19 cd03796 GT1_PIG-A_like This fa 100.0 1.4E-36 2.9E-41 355.9 38.6 366 167-669 1-370 (398)
20 PLN02871 UDP-sulfoquinovose:DA 100.0 1.9E-36 4.1E-41 361.6 39.2 376 163-670 56-438 (465)
21 TIGR02149 glgA_Coryne glycogen 100.0 2.7E-36 5.8E-41 351.4 37.1 377 166-667 1-387 (388)
22 cd03791 GT1_Glycogen_synthase_ 100.0 4.2E-35 9E-40 351.4 37.5 444 167-665 1-475 (476)
23 PRK15427 colanic acid biosynth 100.0 3.3E-34 7.2E-39 335.6 39.8 279 305-667 117-406 (406)
24 TIGR03088 stp2 sugar transfera 100.0 5.9E-34 1.3E-38 330.4 40.0 367 166-667 2-373 (374)
25 cd04962 GT1_like_5 This family 100.0 3.1E-34 6.8E-39 331.4 37.2 366 166-667 1-371 (371)
26 cd03818 GT1_ExpC_like This fam 100.0 5.8E-34 1.2E-38 333.5 36.7 375 197-662 13-396 (396)
27 cd03805 GT1_ALG2_like This fam 100.0 7.1E-33 1.5E-37 323.1 37.7 387 166-660 1-392 (392)
28 PRK15484 lipopolysaccharide 1, 100.0 2.1E-32 4.5E-37 318.2 39.0 368 167-667 4-378 (380)
29 PRK15179 Vi polysaccharide bio 100.0 2.1E-32 4.4E-37 333.2 39.5 391 163-665 278-692 (694)
30 PF05116 S6PP: Sucrose-6F-phos 100.0 3.3E-34 7.1E-39 311.9 20.5 243 769-1050 2-247 (247)
31 cd04955 GT1_like_6 This family 100.0 8.2E-32 1.8E-36 309.6 38.5 360 167-665 1-363 (363)
32 cd05844 GT1_like_7 Glycosyltra 100.0 4E-32 8.6E-37 313.4 34.1 278 305-662 81-366 (367)
33 PRK15490 Vi polysaccharide bio 100.0 8.1E-32 1.8E-36 313.4 35.6 382 191-666 174-575 (578)
34 cd03792 GT1_Trehalose_phosphor 100.0 2.4E-32 5.2E-37 317.0 28.1 284 305-666 84-371 (372)
35 cd03819 GT1_WavL_like This fam 100.0 2.8E-31 6E-36 304.5 35.8 341 190-655 9-354 (355)
36 cd03813 GT1_like_3 This family 100.0 4E-31 8.6E-36 316.2 34.6 293 305-665 172-475 (475)
37 cd03816 GT1_ALG1_like This fam 100.0 1.6E-30 3.5E-35 305.8 38.3 378 191-655 14-405 (415)
38 KOG1111 N-acetylglucosaminyltr 100.0 2.6E-32 5.6E-37 292.1 20.2 367 166-671 1-371 (426)
39 cd03802 GT1_AviGT4_like This f 100.0 1.2E-30 2.6E-35 296.7 35.3 332 166-665 1-335 (335)
40 cd03795 GT1_like_4 This family 100.0 1.4E-30 3E-35 298.5 35.9 352 167-657 1-357 (357)
41 cd03794 GT1_wbuB_like This fam 100.0 2.3E-30 4.9E-35 297.2 37.7 385 167-661 1-394 (394)
42 cd03814 GT1_like_2 This family 100.0 9.8E-31 2.1E-35 299.1 34.5 361 167-664 1-363 (364)
43 cd03821 GT1_Bme6_like This fam 100.0 1.4E-30 3E-35 297.7 34.1 286 305-662 86-375 (375)
44 cd03799 GT1_amsK_like This is 100.0 1.9E-30 4.2E-35 297.0 35.3 268 305-659 78-354 (355)
45 cd03817 GT1_UGDG_like This fam 100.0 6.2E-30 1.3E-34 292.6 36.7 371 167-666 1-373 (374)
46 TIGR03087 stp1 sugar transfera 100.0 1.1E-30 2.4E-35 305.8 31.0 284 305-666 103-396 (397)
47 cd03812 GT1_CapH_like This fam 100.0 2.9E-30 6.3E-35 296.4 33.6 344 167-648 1-346 (358)
48 PRK09922 UDP-D-galactose:(gluc 100.0 2E-30 4.4E-35 299.5 31.7 267 305-668 83-357 (359)
49 cd03801 GT1_YqgM_like This fam 100.0 1.3E-29 2.9E-34 287.4 37.4 289 305-665 84-374 (374)
50 cd03825 GT1_wcfI_like This fam 100.0 3.5E-30 7.6E-35 296.1 32.8 345 166-667 1-365 (365)
51 cd03809 GT1_mtfB_like This fam 100.0 3.4E-30 7.5E-35 295.0 32.4 282 305-662 84-365 (365)
52 PLN02949 transferase, transfer 100.0 3.5E-29 7.7E-34 295.6 41.5 412 156-669 24-459 (463)
53 PLN02846 digalactosyldiacylgly 100.0 9.3E-30 2E-34 296.1 35.9 379 163-666 2-391 (462)
54 PRK10125 putative glycosyl tra 100.0 4.2E-30 9.1E-35 300.2 33.2 282 305-667 93-405 (405)
55 cd03806 GT1_ALG11_like This fa 100.0 1.9E-29 4.1E-34 296.8 38.1 375 191-657 14-417 (419)
56 cd03820 GT1_amsD_like This fam 100.0 1.6E-29 3.5E-34 285.4 36.1 344 167-661 1-347 (348)
57 cd03822 GT1_ecORF704_like This 100.0 3E-29 6.4E-34 287.4 38.6 356 167-665 1-366 (366)
58 cd03807 GT1_WbnK_like This fam 100.0 2.2E-29 4.8E-34 286.6 37.2 350 191-665 12-365 (365)
59 cd04951 GT1_WbdM_like This fam 100.0 2.9E-29 6.2E-34 287.9 38.1 278 305-665 78-359 (360)
60 PF00862 Sucrose_synth: Sucros 100.0 3.5E-32 7.6E-37 304.9 9.8 255 154-441 262-531 (550)
61 cd03808 GT1_cap1E_like This fa 100.0 1E-28 2.3E-33 280.0 37.5 355 167-661 1-358 (359)
62 PLN02382 probable sucrose-phos 100.0 2.6E-30 5.6E-35 299.9 23.8 247 767-1052 7-263 (413)
63 TIGR01485 SPP_plant-cyano sucr 100.0 4.8E-30 1E-34 280.9 24.0 242 769-1051 1-249 (249)
64 cd03798 GT1_wlbH_like This fam 100.0 1.1E-28 2.4E-33 281.0 35.6 283 305-667 92-377 (377)
65 cd03823 GT1_ExpE7_like This fa 100.0 9.1E-29 2E-33 281.9 34.9 261 305-665 95-358 (359)
66 COG0297 GlgA Glycogen synthase 100.0 7E-29 1.5E-33 288.7 30.9 447 166-670 1-481 (487)
67 TIGR02400 trehalose_OtsA alpha 100.0 2.6E-28 5.6E-33 287.4 27.6 346 269-665 85-455 (456)
68 PLN02275 transferase, transfer 100.0 2.8E-27 6.1E-32 274.4 35.8 332 191-631 15-371 (371)
69 cd04946 GT1_AmsK_like This fam 100.0 7.5E-28 1.6E-32 282.5 31.3 276 305-661 126-406 (407)
70 TIGR02471 sucr_syn_bact_C sucr 100.0 6.5E-29 1.4E-33 269.8 20.7 233 771-1050 1-236 (236)
71 cd03811 GT1_WabH_like This fam 100.0 5.8E-27 1.2E-31 264.7 33.8 267 305-652 80-352 (353)
72 cd03804 GT1_wbaZ_like This fam 100.0 4.2E-27 9.1E-32 270.6 33.1 265 305-660 82-350 (351)
73 TIGR02918 accessory Sec system 100.0 2.8E-27 6.2E-32 282.0 32.5 279 305-667 210-500 (500)
74 COG0561 Cof Predicted hydrolas 100.0 1.2E-28 2.5E-33 272.5 19.2 234 768-1051 2-263 (264)
75 PRK10976 putative hydrolase; P 100.0 1.1E-28 2.3E-33 273.2 18.6 244 769-1050 2-265 (266)
76 PRK15126 thiamin pyrimidine py 100.0 2.1E-28 4.6E-33 271.6 20.1 242 769-1049 2-262 (272)
77 PRK10513 sugar phosphate phosp 100.0 1.4E-28 2.9E-33 272.9 16.3 245 769-1049 3-268 (270)
78 PLN02501 digalactosyldiacylgly 100.0 2.7E-26 5.8E-31 269.0 35.0 374 165-665 322-708 (794)
79 cd03793 GT1_Glycogen_synthase_ 100.0 1.6E-26 3.6E-31 269.2 29.2 325 305-669 147-589 (590)
80 cd03788 GT1_TPS Trehalose-6-Ph 100.0 2E-27 4.4E-32 282.0 21.8 357 252-664 67-459 (460)
81 TIGR02398 gluc_glyc_Psyn gluco 99.9 2.5E-26 5.3E-31 268.8 25.4 362 253-665 69-481 (487)
82 PHA01630 putative group 1 glyc 99.9 4.3E-26 9.4E-31 258.9 26.5 255 312-666 52-330 (331)
83 PRK03669 mannosyl-3-phosphogly 99.9 1.5E-26 3.2E-31 256.6 21.6 242 767-1049 5-268 (271)
84 PRK10117 trehalose-6-phosphate 99.9 8.1E-26 1.8E-30 261.4 27.6 422 167-670 3-457 (474)
85 TIGR01482 SPP-subfamily Sucros 99.9 1.1E-26 2.4E-31 250.3 17.4 218 772-1049 1-225 (225)
86 cd04949 GT1_gtfA_like This fam 99.9 2E-25 4.3E-30 258.8 28.5 273 305-660 98-372 (372)
87 PLN02887 hydrolase family prot 99.9 2.5E-26 5.5E-31 274.0 21.2 248 768-1049 307-579 (580)
88 PRK01158 phosphoglycolate phos 99.9 2.2E-26 4.7E-31 249.0 18.8 225 769-1050 3-230 (230)
89 PHA01633 putative glycosyl tra 99.9 3E-24 6.4E-29 241.4 31.8 222 375-662 90-335 (335)
90 PF08282 Hydrolase_3: haloacid 99.9 1.8E-25 4E-30 243.8 18.2 224 772-1045 1-254 (254)
91 PRK10530 pyridoxal phosphate ( 99.9 3.4E-25 7.3E-30 245.9 19.9 246 769-1049 3-271 (272)
92 PRK00726 murG undecaprenyldiph 99.9 7.7E-24 1.7E-28 244.4 31.0 344 166-665 2-356 (357)
93 TIGR01486 HAD-SF-IIB-MPGP mann 99.9 6.3E-25 1.4E-29 241.5 19.4 233 771-1048 1-255 (256)
94 TIGR00099 Cof-subfamily Cof su 99.9 2.5E-24 5.5E-29 236.8 18.2 221 771-1045 1-256 (256)
95 cd03785 GT1_MurG MurG is an N- 99.9 6.3E-23 1.4E-27 235.8 29.8 330 190-658 9-349 (350)
96 TIGR01133 murG undecaprenyldip 99.9 5.8E-23 1.3E-27 235.9 27.9 326 191-658 11-346 (348)
97 KOG1050 Trehalose-6-phosphate 99.9 3.2E-22 6.9E-27 241.5 34.0 529 307-995 141-693 (732)
98 TIGR01487 SPP-like sucrose-pho 99.9 1.2E-23 2.7E-28 225.1 18.0 211 770-1045 2-215 (215)
99 COG0380 OtsA Trehalose-6-phosp 99.9 2.2E-22 4.8E-27 231.4 27.2 347 269-666 105-479 (486)
100 PF00982 Glyco_transf_20: Glyc 99.9 4.3E-23 9.4E-28 242.3 20.5 325 289-665 129-473 (474)
101 PRK00192 mannosyl-3-phosphogly 99.9 8.4E-23 1.8E-27 226.8 19.8 245 769-1049 4-271 (273)
102 PRK10187 trehalose-6-phosphate 99.9 1.1E-21 2.3E-26 216.2 15.7 195 768-1004 13-223 (266)
103 PRK05749 3-deoxy-D-manno-octul 99.9 3.2E-20 6.8E-25 219.6 28.9 283 305-668 123-421 (425)
104 PRK14502 bifunctional mannosyl 99.9 2.8E-20 6.1E-25 220.3 23.9 257 756-1048 403-689 (694)
105 cd04950 GT1_like_1 Glycosyltra 99.9 2.4E-19 5.2E-24 208.3 31.3 266 305-666 101-371 (373)
106 PRK13609 diacylglycerol glucos 99.8 3.8E-19 8.3E-24 207.2 31.2 263 305-667 103-372 (380)
107 PTZ00174 phosphomannomutase; P 99.8 1.9E-20 4E-25 204.7 18.7 206 768-1004 4-234 (247)
108 TIGR02463 MPGP_rel mannosyl-3- 99.8 1.6E-20 3.5E-25 201.9 17.3 204 771-1001 1-221 (221)
109 PLN02605 monogalactosyldiacylg 99.8 9.3E-19 2E-23 204.0 32.5 264 305-664 99-379 (382)
110 PRK13608 diacylglycerol glucos 99.8 9.3E-19 2E-23 204.5 29.0 267 305-671 103-376 (391)
111 TIGR01484 HAD-SF-IIB HAD-super 99.8 6.6E-20 1.4E-24 194.7 15.8 193 771-1000 1-204 (204)
112 PF00534 Glycos_transf_1: Glyc 99.8 3.7E-20 8E-25 190.5 12.9 162 470-647 10-172 (172)
113 KOG1387 Glycosyltransferase [C 99.8 2.1E-16 4.5E-21 169.0 31.5 389 191-670 57-462 (465)
114 TIGR02461 osmo_MPG_phos mannos 99.8 1.1E-18 2.5E-23 187.5 14.1 209 771-1001 1-225 (225)
115 PLN02580 trehalose-phosphatase 99.8 5.3E-18 1.2E-22 191.8 16.2 207 767-1004 117-354 (384)
116 cd01635 Glycosyltransferase_GT 99.8 8.5E-17 1.8E-21 171.2 22.2 119 480-615 109-229 (229)
117 TIGR00685 T6PP trehalose-phosp 99.7 2.3E-17 4.9E-22 180.1 17.8 195 768-1001 2-217 (244)
118 PLN02423 phosphomannomutase 99.7 2.3E-17 5E-22 179.8 17.6 208 766-1004 4-234 (245)
119 COG0438 RfaG Glycosyltransfera 99.7 8.1E-16 1.8E-20 172.3 30.3 289 307-669 84-379 (381)
120 TIGR02094 more_P_ylases alpha- 99.7 8.9E-17 1.9E-21 194.0 22.8 335 305-665 160-599 (601)
121 PRK12702 mannosyl-3-phosphogly 99.7 1.1E-16 2.4E-21 172.9 21.0 251 769-1048 1-293 (302)
122 PLN03017 trehalose-phosphatase 99.7 1.1E-16 2.4E-21 179.5 16.3 205 767-1002 109-334 (366)
123 TIGR00236 wecB UDP-N-acetylglu 99.7 2.1E-16 4.5E-21 183.2 18.5 271 305-660 85-361 (365)
124 PRK09814 beta-1,6-galactofuran 99.7 9.2E-15 2E-19 167.3 29.1 243 305-657 62-322 (333)
125 PRK00025 lpxB lipid-A-disaccha 99.7 3.2E-15 7E-20 174.1 24.7 265 305-666 84-373 (380)
126 cd03786 GT1_UDP-GlcNAc_2-Epime 99.7 2.1E-15 4.5E-20 174.4 21.9 250 305-640 87-344 (363)
127 KOG2941 Beta-1,4-mannosyltrans 99.7 1.4E-13 3E-18 147.8 33.4 381 196-657 28-432 (444)
128 PLN02151 trehalose-phosphatase 99.7 1.2E-15 2.7E-20 170.7 15.5 204 767-1001 96-319 (354)
129 COG1877 OtsB Trehalose-6-phosp 99.6 4.7E-15 1E-19 160.3 15.0 196 765-996 14-219 (266)
130 PF02358 Trehalose_PPase: Treh 99.6 2.5E-15 5.4E-20 163.2 8.7 204 773-1019 1-232 (235)
131 PF05693 Glycogen_syn: Glycoge 99.6 1E-13 2.2E-18 161.4 22.2 325 306-669 143-584 (633)
132 cd04299 GT1_Glycogen_Phosphory 99.6 1.3E-13 2.8E-18 169.4 24.2 330 305-665 247-688 (778)
133 TIGR03713 acc_sec_asp1 accesso 99.5 5.7E-13 1.2E-17 159.4 20.5 166 477-663 321-518 (519)
134 PF13692 Glyco_trans_1_4: Glyc 99.4 7E-13 1.5E-17 130.6 7.0 131 475-633 2-135 (135)
135 TIGR00215 lpxB lipid-A-disacch 99.4 8.2E-11 1.8E-15 137.2 25.3 251 305-649 88-367 (385)
136 COG3769 Predicted hydrolase (H 99.3 1.2E-10 2.5E-15 118.3 15.8 250 769-1049 7-271 (274)
137 PF13579 Glyco_trans_4_4: Glyc 99.2 2.8E-11 6.1E-16 121.5 10.3 160 191-431 1-160 (160)
138 PF13524 Glyco_trans_1_2: Glyc 99.2 3.5E-11 7.6E-16 110.6 9.8 91 570-662 1-92 (92)
139 PRK12446 undecaprenyldiphospho 99.2 9.9E-09 2.1E-13 118.2 32.0 329 189-665 10-350 (352)
140 COG0707 MurG UDP-N-acetylgluco 99.2 1.2E-08 2.5E-13 116.7 31.1 330 189-658 9-349 (357)
141 PF13439 Glyco_transf_4: Glyco 99.2 2.2E-10 4.9E-15 117.0 14.0 169 188-438 9-177 (177)
142 PF08323 Glyco_transf_5: Starc 99.1 4.5E-11 9.8E-16 130.5 5.3 214 167-396 1-234 (245)
143 TIGR02919 accessory Sec system 99.0 2.3E-08 5E-13 117.4 24.2 192 376-652 238-430 (438)
144 TIGR03492 conserved hypothetic 99.0 2.3E-07 4.9E-12 108.7 28.9 150 486-660 219-392 (396)
145 cd03784 GT1_Gtf_like This fami 98.9 3.5E-07 7.5E-12 107.6 25.9 132 468-634 233-373 (401)
146 PF09314 DUF1972: Domain of un 98.8 4.4E-07 9.5E-12 93.5 20.7 180 167-433 3-185 (185)
147 TIGR01670 YrbI-phosphatas 3-de 98.8 1.9E-08 4E-13 101.9 8.2 74 956-1050 76-150 (154)
148 TIGR01426 MGT glycosyltransfer 98.8 6.5E-06 1.4E-10 96.6 30.7 109 543-662 274-388 (392)
149 TIGR03568 NeuC_NnaA UDP-N-acet 98.7 3.9E-06 8.4E-11 97.4 26.0 263 305-663 92-364 (365)
150 TIGR02726 phenyl_P_delta pheny 98.6 1E-07 2.3E-12 97.5 9.3 71 956-1047 82-153 (169)
151 PRK11133 serB phosphoserine ph 98.6 1.5E-08 3.3E-13 114.4 3.4 71 954-1046 246-316 (322)
152 COG1519 KdtA 3-deoxy-D-manno-o 98.6 7.5E-05 1.6E-09 84.9 29.9 264 305-649 122-402 (419)
153 TIGR00661 MJ1255 conserved hyp 98.5 9.6E-06 2.1E-10 92.5 23.0 112 488-634 198-315 (321)
154 PF13477 Glyco_trans_4_2: Glyc 98.5 2.2E-06 4.7E-11 84.8 14.7 128 194-385 10-139 (139)
155 PRK09484 3-deoxy-D-manno-octul 98.5 9.3E-08 2E-12 99.8 4.5 45 957-1004 97-141 (183)
156 PF13528 Glyco_trans_1_3: Glyc 98.5 1.1E-05 2.4E-10 91.6 21.1 118 473-630 191-317 (318)
157 KOG3742 Glycogen synthase [Car 98.4 1.9E-06 4.1E-11 96.0 12.7 318 308-665 176-611 (692)
158 smart00775 LNS2 LNS2 domain. T 98.3 8.3E-07 1.8E-11 90.1 6.6 67 771-844 1-89 (157)
159 TIGR03590 PseG pseudaminic aci 98.3 0.0001 2.2E-09 82.4 22.8 98 475-599 171-268 (279)
160 TIGR01457 HAD-SF-IIA-hyp2 HAD- 98.2 7E-06 1.5E-10 90.1 10.1 70 770-844 2-76 (249)
161 cd01427 HAD_like Haloacid deha 98.1 4.1E-06 9E-11 81.5 6.2 52 771-826 1-63 (139)
162 COG4641 Uncharacterized protei 98.1 0.00043 9.3E-09 77.6 22.4 124 541-670 234-365 (373)
163 KOG3189 Phosphomannomutase [Li 98.1 3.3E-05 7.1E-10 78.0 11.6 195 767-993 9-228 (252)
164 PF04007 DUF354: Protein of un 98.1 0.0014 3.1E-08 74.4 26.4 66 556-632 241-309 (335)
165 COG1778 Low specificity phosph 98.0 2.6E-06 5.7E-11 83.1 2.3 62 956-1038 83-144 (170)
166 PHA03392 egt ecdysteroid UDP-g 98.0 0.0024 5.2E-08 77.3 27.8 164 465-664 286-464 (507)
167 PF02350 Epimerase_2: UDP-N-ac 97.9 0.00015 3.2E-09 83.5 15.6 272 305-664 66-345 (346)
168 COG0560 SerB Phosphoserine pho 97.9 2.5E-05 5.5E-10 83.2 8.1 52 947-1001 135-186 (212)
169 TIGR01684 viral_ppase viral ph 97.9 3.1E-05 6.7E-10 84.6 7.9 72 767-844 124-201 (301)
170 PLN02448 UDP-glycosyltransfera 97.8 0.026 5.6E-07 67.7 33.1 142 474-647 274-430 (459)
171 TIGR01689 EcbF-BcbF capsule bi 97.8 3.3E-05 7.2E-10 74.8 6.7 54 770-827 2-79 (126)
172 COG0381 WecB UDP-N-acetylgluco 97.8 0.0023 4.9E-08 72.6 21.0 274 305-666 91-370 (383)
173 PRK10444 UMP phosphatase; Prov 97.8 0.00033 7.1E-09 76.7 13.9 64 770-838 2-70 (248)
174 PF13844 Glyco_transf_41: Glyc 97.8 0.00018 4E-09 84.3 12.4 185 463-667 273-467 (468)
175 COG1819 Glycosyl transferases, 97.7 0.0023 5E-08 75.3 21.3 105 541-657 281-391 (406)
176 PLN03007 UDP-glucosyltransfera 97.7 0.099 2.2E-06 63.1 35.7 140 474-634 285-441 (482)
177 PLN02208 glycosyltransferase f 97.7 0.085 1.8E-06 62.8 33.5 111 545-664 312-437 (442)
178 PHA03398 viral phosphatase sup 97.6 0.00013 2.8E-09 80.0 7.7 74 766-845 125-204 (303)
179 PLN02670 transferase, transfer 97.5 0.16 3.4E-06 60.9 32.3 185 463-668 265-467 (472)
180 PRK10017 colanic acid biosynth 97.4 0.31 6.7E-06 57.7 33.5 89 549-648 313-407 (426)
181 PF03332 PMM: Eukaryotic phosp 97.3 0.00039 8.4E-09 72.9 6.6 183 789-1004 2-209 (220)
182 PLN02562 UDP-glycosyltransfera 97.3 0.22 4.8E-06 59.5 30.3 137 475-638 274-418 (448)
183 PF02684 LpxB: Lipid-A-disacch 97.3 0.025 5.5E-07 65.3 21.1 145 471-639 180-346 (373)
184 PLN02410 UDP-glucoronosyl/UDP- 97.3 0.35 7.6E-06 57.8 31.4 92 544-645 324-421 (451)
185 COG3914 Spy Predicted O-linked 97.2 0.015 3.2E-07 68.5 17.9 180 470-669 425-616 (620)
186 COG4671 Predicted glycosyl tra 97.1 0.21 4.5E-06 56.0 25.1 336 165-632 9-364 (400)
187 PLN02173 UDP-glucosyl transfer 97.1 0.86 1.9E-05 54.4 32.7 94 544-647 317-421 (449)
188 PLN02863 UDP-glucoronosyl/UDP- 97.1 1.2 2.5E-05 53.8 36.2 170 475-665 284-470 (477)
189 PLN00414 glycosyltransferase f 97.1 0.6 1.3E-05 55.7 30.6 93 546-647 314-417 (446)
190 COG0763 LpxB Lipid A disacchar 97.0 0.045 9.7E-07 62.2 19.0 151 466-643 179-354 (381)
191 TIGR01458 HAD-SF-IIA-hyp3 HAD- 96.9 0.00055 1.2E-08 75.5 3.0 64 770-838 2-74 (257)
192 PF08550 DUF1752: Fungal prote 96.9 0.00041 8.8E-09 48.8 1.1 24 63-86 6-29 (29)
193 cd04300 GT1_Glycogen_Phosphory 96.9 0.005 1.1E-07 76.5 11.2 148 471-625 526-689 (797)
194 PF11997 DUF3492: Domain of un 96.8 0.037 7.9E-07 61.3 16.7 85 306-392 172-260 (268)
195 PLN02210 UDP-glucosyl transfer 96.8 1.8 3.9E-05 51.9 32.2 136 474-635 269-417 (456)
196 PLN02992 coniferyl-alcohol glu 96.8 1.9 4.2E-05 51.9 33.9 81 545-634 339-428 (481)
197 PRK01021 lpxB lipid-A-disaccha 96.8 0.058 1.3E-06 65.3 19.1 154 466-647 404-585 (608)
198 PLN02764 glycosyltransferase f 96.8 1.9 4E-05 51.6 32.9 113 546-667 319-446 (453)
199 PRK02797 4-alpha-L-fucosyltran 96.8 0.18 3.9E-06 56.0 21.2 166 476-669 146-319 (322)
200 PLN02645 phosphoglycolate phos 96.8 0.0017 3.7E-08 73.7 5.6 65 768-837 27-96 (311)
201 PLN00164 glucosyltransferase; 96.8 2.1 4.6E-05 51.6 33.8 93 546-647 341-446 (480)
202 PF12000 Glyco_trans_4_3: Gkyc 96.7 0.017 3.6E-07 59.2 11.9 146 252-437 19-170 (171)
203 PLN02554 UDP-glycosyltransfera 96.7 2.3 5E-05 51.5 35.0 83 544-635 342-443 (481)
204 COG3980 spsG Spore coat polysa 96.7 0.059 1.3E-06 58.4 16.2 93 473-594 157-249 (318)
205 COG0058 GlgP Glucan phosphoryl 96.7 0.016 3.5E-07 71.2 13.3 139 471-616 483-629 (750)
206 TIGR01662 HAD-SF-IIIA HAD-supe 96.6 0.0026 5.6E-08 62.4 5.3 54 770-827 1-73 (132)
207 TIGR01681 HAD-SF-IIIC HAD-supe 96.6 0.0027 5.9E-08 62.1 5.3 52 770-825 1-68 (128)
208 COG0647 NagD Predicted sugar p 96.6 0.014 3E-07 64.2 11.3 66 767-837 6-77 (269)
209 PLN02167 UDP-glycosyltransfera 96.6 2.7 5.8E-05 50.7 34.9 148 466-634 270-435 (475)
210 TIGR02093 P_ylase glycogen/sta 96.6 0.0039 8.4E-08 77.1 7.4 149 471-626 523-687 (794)
211 PF08288 PIGA: PIGA (GPI ancho 96.5 0.0061 1.3E-07 54.3 6.2 72 251-340 13-86 (90)
212 PLN02555 limonoid glucosyltran 96.5 2.5 5.4E-05 51.0 29.9 94 544-647 337-442 (480)
213 TIGR01452 PGP_euk phosphoglyco 96.5 0.0031 6.7E-08 70.5 5.0 68 768-840 1-73 (279)
214 TIGR00338 serB phosphoserine p 96.4 0.0072 1.6E-07 64.7 7.3 43 956-1001 152-194 (219)
215 COG1817 Uncharacterized protei 96.4 0.44 9.6E-06 52.6 20.5 136 465-635 172-316 (346)
216 PF07429 Glyco_transf_56: 4-al 96.3 0.38 8.3E-06 54.1 20.3 144 475-632 185-332 (360)
217 PRK10671 copA copper exporting 96.3 0.022 4.9E-07 73.4 12.4 54 769-826 630-689 (834)
218 PF13344 Hydrolase_6: Haloacid 96.3 0.006 1.3E-07 57.1 5.2 52 772-827 1-57 (101)
219 TIGR01106 ATPase-IIC_X-K sodiu 96.3 0.059 1.3E-06 70.7 15.9 42 781-826 566-607 (997)
220 TIGR01664 DNA-3'-Pase DNA 3'-p 96.1 0.0083 1.8E-07 61.6 5.8 64 768-838 12-102 (166)
221 PLN02954 phosphoserine phospha 96.1 0.031 6.8E-07 60.0 10.3 44 952-1000 151-194 (224)
222 COG3660 Predicted nucleoside-d 96.1 0.86 1.9E-05 49.1 20.2 203 302-601 66-275 (329)
223 TIGR01497 kdpB K+-transporting 96.1 0.05 1.1E-06 67.5 12.9 53 770-826 427-485 (675)
224 PRK14986 glycogen phosphorylas 96.0 0.022 4.7E-07 70.9 9.5 148 471-625 539-702 (815)
225 PRK14985 maltodextrin phosphor 95.7 0.06 1.3E-06 66.9 11.2 140 471-616 525-680 (798)
226 PLN02152 indole-3-acetate beta 95.7 6.9 0.00015 46.9 29.4 146 474-635 261-419 (455)
227 PF00343 Phosphorylase: Carboh 95.5 0.19 4.2E-06 61.9 14.6 146 471-623 440-601 (713)
228 TIGR01460 HAD-SF-IIA Haloacid 95.3 0.013 2.8E-07 63.8 3.5 66 772-842 1-72 (236)
229 TIGR01517 ATPase-IIB_Ca plasma 95.3 0.26 5.6E-06 64.5 16.0 43 781-827 577-619 (941)
230 PRK13222 phosphoglycolate phos 95.3 0.11 2.4E-06 55.7 10.7 46 956-1004 150-196 (226)
231 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.3 0.022 4.8E-07 62.2 5.2 67 767-837 6-76 (242)
232 TIGR01647 ATPase-IIIA_H plasma 95.3 0.12 2.5E-06 65.9 12.4 55 769-827 417-482 (755)
233 TIGR01524 ATPase-IIIB_Mg magne 95.2 0.3 6.4E-06 63.3 15.9 43 781-827 513-555 (867)
234 PRK13223 phosphoglycolate phos 95.2 0.03 6.4E-07 62.4 5.9 51 951-1004 153-204 (272)
235 PRK11590 hypothetical protein; 95.1 0.082 1.8E-06 56.5 8.9 45 951-1001 158-202 (211)
236 TIGR01525 ATPase-IB_hvy heavy 95.1 0.12 2.6E-06 63.6 11.5 54 769-826 364-424 (556)
237 TIGR01523 ATPase-IID_K-Na pota 95.1 0.21 4.5E-06 65.8 14.1 43 781-827 644-686 (1053)
238 TIGR01657 P-ATPase-V P-type AT 95.1 0.099 2.2E-06 69.1 11.2 43 781-827 654-696 (1054)
239 PRK10517 magnesium-transportin 95.1 0.32 6.9E-06 63.1 15.5 42 781-826 548-589 (902)
240 TIGR01511 ATPase-IB1_Cu copper 95.0 0.097 2.1E-06 64.5 10.4 54 769-826 385-444 (562)
241 PRK11033 zntA zinc/cadmium/mer 94.9 0.11 2.4E-06 65.9 10.7 54 769-826 548-607 (741)
242 TIGR01116 ATPase-IIA1_Ca sarco 94.9 0.12 2.7E-06 67.2 11.3 42 781-826 535-576 (917)
243 PF08235 LNS2: LNS2 (Lipin/Ned 94.9 0.062 1.3E-06 54.1 6.6 50 771-824 1-67 (157)
244 PRK13225 phosphoglycolate phos 94.9 0.28 6E-06 54.7 12.4 42 956-1000 196-237 (273)
245 TIGR01672 AphA HAD superfamily 94.8 0.055 1.2E-06 58.7 6.6 36 788-827 119-158 (237)
246 TIGR01522 ATPase-IIA2_Ca golgi 94.8 0.41 8.9E-06 62.3 15.6 55 769-827 503-568 (884)
247 TIGR01675 plant-AP plant acid 94.7 0.071 1.5E-06 57.2 7.0 56 768-827 76-163 (229)
248 PRK13226 phosphoglycolate phos 94.7 0.066 1.4E-06 57.9 6.9 40 957-999 153-192 (229)
249 PRK15122 magnesium-transportin 94.7 0.41 8.9E-06 62.2 15.1 42 781-826 548-589 (903)
250 PRK01122 potassium-transportin 94.6 0.28 6.1E-06 61.1 12.8 53 770-826 426-484 (679)
251 TIGR01685 MDP-1 magnesium-depe 94.6 0.057 1.2E-06 55.8 5.6 53 770-826 3-85 (174)
252 PRK14089 ipid-A-disaccharide s 94.1 1.8 4E-05 49.8 17.2 80 487-598 182-261 (347)
253 TIGR01656 Histidinol-ppas hist 94.0 0.069 1.5E-06 53.5 4.9 53 770-826 1-81 (147)
254 PF06888 Put_Phosphatase: Puta 93.9 4.1 8.8E-05 44.2 18.2 83 950-1048 144-233 (234)
255 TIGR01663 PNK-3'Pase polynucle 93.8 0.1 2.2E-06 63.0 6.6 66 766-838 165-257 (526)
256 PRK13582 thrH phosphoserine ph 93.8 0.14 3E-06 54.1 6.8 40 955-1001 131-170 (205)
257 TIGR01533 lipo_e_P4 5'-nucleot 93.6 0.17 3.7E-06 55.8 7.2 66 768-837 74-171 (266)
258 TIGR01261 hisB_Nterm histidino 93.6 0.11 2.4E-06 53.0 5.4 60 769-835 1-89 (161)
259 PRK10826 2-deoxyglucose-6-phos 93.5 0.41 8.9E-06 51.3 10.0 45 954-1001 147-191 (222)
260 KOG1615 Phosphoserine phosphat 93.4 0.27 5.9E-06 50.4 7.6 36 954-994 157-192 (227)
261 PRK14010 potassium-transportin 93.3 0.55 1.2E-05 58.5 11.9 53 770-826 422-480 (673)
262 PF12038 DUF3524: Domain of un 93.3 1.6 3.4E-05 44.2 12.8 101 306-432 59-168 (168)
263 PF04464 Glyphos_transf: CDP-G 93.3 0.79 1.7E-05 53.3 12.7 109 542-664 250-367 (369)
264 PRK08942 D,D-heptose 1,7-bisph 93.2 0.13 2.7E-06 53.5 5.4 41 769-813 3-55 (181)
265 PLN02534 UDP-glycosyltransfera 93.2 25 0.00054 42.6 34.6 93 545-646 345-458 (491)
266 PLN03015 UDP-glucosyl transfer 93.2 25 0.00054 42.4 32.2 92 546-646 337-440 (470)
267 TIGR01512 ATPase-IB2_Cd heavy 93.1 0.43 9.4E-06 58.5 10.5 53 770-826 343-402 (536)
268 smart00577 CPDc catalytic doma 93.0 0.18 3.9E-06 50.6 5.9 54 768-826 1-83 (148)
269 PF06258 Mito_fiss_Elm1: Mitoc 92.9 3 6.6E-05 47.3 16.0 195 304-601 55-259 (311)
270 TIGR01686 FkbH FkbH-like domai 92.9 0.21 4.6E-06 57.0 6.9 63 769-836 3-83 (320)
271 PHA02530 pseT polynucleotide k 92.8 0.12 2.6E-06 58.2 4.8 56 767-826 156-226 (300)
272 TIGR01668 YqeG_hyp_ppase HAD s 92.8 0.18 3.8E-06 52.0 5.6 54 769-826 25-83 (170)
273 TIGR00213 GmhB_yaeD D,D-heptos 92.7 0.16 3.5E-06 52.5 5.2 40 770-813 2-52 (176)
274 TIGR01491 HAD-SF-IB-PSPlk HAD- 92.7 0.078 1.7E-06 55.7 2.9 45 955-1002 146-190 (201)
275 COG2217 ZntA Cation transport 92.3 0.63 1.4E-05 58.2 10.4 52 771-826 519-576 (713)
276 PRK13288 pyrophosphatase PpaX; 92.2 0.63 1.4E-05 49.6 9.2 45 952-999 135-179 (214)
277 COG0474 MgtA Cation transport 92.0 0.71 1.5E-05 60.1 10.9 43 781-827 545-587 (917)
278 PF04101 Glyco_tran_28_C: Glyc 91.9 0.091 2E-06 53.7 2.2 90 544-643 55-154 (167)
279 PRK08238 hypothetical protein; 91.4 0.4 8.6E-06 57.6 7.1 48 786-841 75-122 (479)
280 PLN02575 haloacid dehalogenase 91.2 0.96 2.1E-05 52.5 9.7 41 957-1000 274-314 (381)
281 COG2179 Predicted hydrolase of 91.0 0.53 1.2E-05 47.4 6.3 57 767-827 26-86 (175)
282 PF00201 UDPGT: UDP-glucoronos 90.9 0.33 7.1E-06 59.0 6.0 92 544-648 323-420 (500)
283 PF11440 AGT: DNA alpha-glucos 90.7 28 0.0006 38.3 19.0 140 479-633 187-353 (355)
284 PRK06769 hypothetical protein; 90.5 0.41 8.9E-06 49.4 5.4 55 768-826 3-75 (173)
285 TIGR01490 HAD-SF-IB-hyp1 HAD-s 90.4 0.17 3.8E-06 53.2 2.5 48 951-1001 150-197 (202)
286 PRK10422 lipopolysaccharide co 90.1 42 0.0009 38.7 24.3 105 474-599 183-289 (352)
287 PRK09552 mtnX 2-hydroxy-3-keto 90.0 0.46 1E-05 50.9 5.5 37 956-999 148-184 (219)
288 TIGR02253 CTE7 HAD superfamily 89.9 1.4 3E-05 47.0 9.0 42 957-1001 152-195 (221)
289 PRK05446 imidazole glycerol-ph 89.6 0.55 1.2E-05 54.0 5.9 55 769-827 2-85 (354)
290 PRK11009 aphA acid phosphatase 89.5 1 2.2E-05 48.9 7.6 36 788-827 119-158 (237)
291 COG4370 Uncharacterized protei 89.0 5 0.00011 44.2 12.1 152 482-658 234-405 (412)
292 PF05152 DUF705: Protein of un 88.8 1.2 2.6E-05 48.8 7.3 67 767-838 120-192 (297)
293 TIGR01456 CECR5 HAD-superfamil 88.6 0.67 1.5E-05 52.9 5.8 66 771-837 2-73 (321)
294 TIGR01488 HAD-SF-IB Haloacid D 88.5 0.22 4.8E-06 51.1 1.6 42 950-994 136-177 (177)
295 TIGR01489 DKMTPPase-SF 2,3-dik 87.9 0.85 1.8E-05 47.1 5.6 40 952-997 145-184 (188)
296 PF03033 Glyco_transf_28: Glyc 87.6 0.63 1.4E-05 45.7 4.2 117 190-339 8-131 (139)
297 PLN03243 haloacid dehalogenase 87.5 1.8 3.8E-05 47.9 8.0 40 957-999 167-206 (260)
298 TIGR01680 Veg_Stor_Prot vegeta 87.3 1.4 3E-05 48.4 6.8 55 769-827 101-188 (275)
299 KOG0203 Na+/K+ ATPase, alpha s 86.8 5.6 0.00012 49.5 12.0 89 922-1037 670-759 (1019)
300 PF08645 PNK3P: Polynucleotide 86.7 0.44 9.6E-06 48.5 2.5 53 770-826 1-82 (159)
301 PLN03190 aminophospholipid tra 86.6 2.9 6.2E-05 55.8 10.5 42 781-826 724-765 (1178)
302 TIGR02137 HSK-PSP phosphoserin 86.4 0.67 1.5E-05 49.2 3.8 54 953-1016 129-182 (203)
303 PF12689 Acid_PPase: Acid Phos 86.2 0.77 1.7E-05 47.1 3.9 53 770-826 4-85 (169)
304 PRK11587 putative phosphatase; 86.1 5.2 0.00011 42.7 10.6 44 957-1003 140-184 (218)
305 PF03767 Acid_phosphat_B: HAD 85.0 0.75 1.6E-05 49.8 3.4 56 768-827 71-158 (229)
306 COG0637 Predicted phosphatase/ 85.0 0.98 2.1E-05 48.6 4.3 45 786-835 89-133 (221)
307 PF12710 HAD: haloacid dehalog 84.8 0.83 1.8E-05 47.4 3.6 38 786-827 92-129 (192)
308 TIGR01652 ATPase-Plipid phosph 84.3 3.7 8E-05 54.7 10.0 42 781-826 629-670 (1057)
309 COG3882 FkbH Predicted enzyme 84.2 2.1 4.5E-05 50.0 6.4 56 766-825 219-293 (574)
310 TIGR02137 HSK-PSP phosphoserin 84.0 1.3 2.9E-05 46.9 4.7 39 784-827 69-107 (203)
311 PLN02207 UDP-glycosyltransfera 83.3 19 0.0004 43.4 14.4 133 474-632 275-425 (468)
312 PTZ00445 p36-lilke protein; Pr 83.2 1.5 3.4E-05 46.1 4.6 50 950-1002 156-206 (219)
313 TIGR03333 salvage_mtnX 2-hydro 83.0 2.2 4.8E-05 45.5 6.0 40 954-1000 142-181 (214)
314 PF09419 PGP_phosphatase: Mito 82.8 2.3 5E-05 43.6 5.6 58 767-827 39-108 (168)
315 KOG4626 O-linked N-acetylgluco 81.7 9.9 0.00021 45.8 10.7 177 473-670 757-944 (966)
316 KOG0202 Ca2+ transporting ATPa 81.5 6.9 0.00015 48.8 9.7 53 769-826 571-623 (972)
317 PF03031 NIF: NLI interacting 80.2 2.4 5.2E-05 42.8 4.8 52 770-826 1-74 (159)
318 PF06437 ISN1: IMP-specific 5' 79.5 3.8 8.3E-05 46.7 6.3 193 769-982 147-378 (408)
319 KOG0210 P-type ATPase [Inorgan 79.1 13 0.00029 45.2 10.8 41 956-1002 768-809 (1051)
320 COG0241 HisB Histidinol phosph 77.5 3.3 7E-05 43.0 4.7 63 769-837 5-94 (181)
321 PF04413 Glycos_transf_N: 3-De 77.4 26 0.00056 36.7 11.5 135 191-394 31-166 (186)
322 PLN03004 UDP-glycosyltransfera 77.2 5.7 0.00012 47.5 7.4 142 474-635 270-426 (451)
323 TIGR03609 S_layer_CsaB polysac 77.1 1.1E+02 0.0024 34.2 17.6 101 475-598 172-276 (298)
324 PF10087 DUF2325: Uncharacteri 76.3 4.9 0.00011 37.2 5.1 80 511-605 3-89 (97)
325 COG4359 Uncharacterized conser 75.6 5.4 0.00012 40.9 5.5 38 784-825 74-111 (220)
326 COG4996 Predicted phosphatase 74.2 6 0.00013 38.3 5.1 40 784-827 42-81 (164)
327 COG5083 SMP2 Uncharacterized p 73.5 1.8 3.9E-05 49.6 1.7 70 764-845 370-453 (580)
328 TIGR02245 HAD_IIID1 HAD-superf 72.4 7.6 0.00016 40.9 6.0 58 764-826 16-83 (195)
329 TIGR02250 FCP1_euk FCP1-like p 72.2 12 0.00026 38.0 7.2 57 765-826 2-96 (156)
330 PF05159 Capsule_synth: Capsul 72.0 28 0.0006 38.5 10.8 123 472-623 114-244 (269)
331 KOG1021 Acetylglucosaminyltran 71.2 25 0.00055 42.3 10.9 86 554-646 334-424 (464)
332 KOG2116 Protein involved in pl 68.5 7.4 0.00016 47.1 5.3 69 768-845 529-614 (738)
333 PF08660 Alg14: Oligosaccharid 63.1 45 0.00097 34.4 9.3 63 305-390 91-159 (170)
334 PF03016 Exostosin: Exostosin 60.4 8.2 0.00018 43.2 3.7 70 555-628 228-300 (302)
335 TIGR02251 HIF-SF_euk Dullard-l 60.3 16 0.00034 37.3 5.4 53 769-826 1-80 (162)
336 PF06941 NT5C: 5' nucleotidase 60.0 8.5 0.00018 40.2 3.5 37 784-824 74-117 (191)
337 PF00702 Hydrolase: haloacid d 59.8 11 0.00025 39.4 4.5 41 782-826 126-166 (215)
338 PF13242 Hydrolase_like: HAD-h 58.9 8 0.00017 33.7 2.6 44 959-1004 8-52 (75)
339 PF06925 MGDG_synth: Monogalac 57.5 61 0.0013 33.0 9.3 61 305-393 88-153 (169)
340 TIGR01548 HAD-SF-IA-hyp1 haloa 57.4 17 0.00037 38.0 5.3 45 788-837 111-155 (197)
341 PRK10725 fructose-1-P/6-phosph 57.0 9.5 0.00021 39.4 3.2 40 956-998 143-182 (188)
342 PLN02770 haloacid dehalogenase 56.5 11 0.00024 41.2 3.8 41 956-999 165-205 (248)
343 KOG0853 Glycosyltransferase [C 56.4 31 0.00067 41.4 7.6 48 371-439 203-250 (495)
344 PLN02770 haloacid dehalogenase 55.0 18 0.0004 39.5 5.2 49 785-838 110-158 (248)
345 COG0546 Gph Predicted phosphat 54.1 17 0.00037 38.9 4.7 47 785-836 91-137 (220)
346 KOG0208 Cation transport ATPas 53.4 21 0.00046 45.5 5.7 43 781-827 703-745 (1140)
347 cd03789 GT1_LPS_heptosyltransf 52.9 51 0.0011 36.5 8.4 100 477-599 124-225 (279)
348 PF00702 Hydrolase: haloacid d 52.9 7.1 0.00015 41.0 1.5 33 960-995 183-215 (215)
349 PF15024 Glyco_transf_18: Glyc 52.8 27 0.00057 42.3 6.3 152 474-665 276-454 (559)
350 TIGR02193 heptsyl_trn_I lipopo 52.8 91 0.002 35.2 10.7 100 474-598 179-280 (319)
351 PRK13288 pyrophosphatase PpaX; 51.5 20 0.00044 37.9 4.7 47 785-836 84-130 (214)
352 TIGR01449 PGP_bact 2-phosphogl 51.0 8.6 0.00019 40.6 1.8 41 957-1000 143-183 (213)
353 TIGR01449 PGP_bact 2-phosphogl 49.7 22 0.00047 37.5 4.6 47 785-836 87-133 (213)
354 TIGR01545 YfhB_g-proteo haloac 49.7 12 0.00026 39.9 2.6 44 952-1001 158-201 (210)
355 TIGR01454 AHBA_synth_RP 3-amin 49.5 17 0.00038 38.1 3.8 48 784-836 76-123 (205)
356 TIGR01662 HAD-SF-IIIA HAD-supe 48.5 44 0.00095 32.3 6.2 41 956-999 86-128 (132)
357 PF13419 HAD_2: Haloacid dehal 48.4 18 0.00039 36.2 3.6 48 785-837 79-126 (176)
358 TIGR02195 heptsyl_trn_II lipop 48.0 1.1E+02 0.0024 34.8 10.5 103 472-598 171-277 (334)
359 KOG1192 UDP-glucuronosyl and U 47.7 1.1E+02 0.0023 37.0 10.7 108 543-660 334-449 (496)
360 PF01075 Glyco_transf_9: Glyco 47.3 50 0.0011 35.7 7.1 104 473-598 104-209 (247)
361 TIGR03351 PhnX-like phosphonat 47.3 20 0.00043 38.1 3.9 49 784-836 88-137 (220)
362 TIGR01544 HAD-SF-IE haloacid d 47.0 17 0.00036 40.5 3.2 38 954-994 190-230 (277)
363 TIGR02253 CTE7 HAD superfamily 44.9 25 0.00053 37.3 4.2 48 785-837 96-143 (221)
364 COG1703 ArgK Putative periplas 44.4 2.5E+02 0.0055 31.6 11.6 118 191-343 62-180 (323)
365 TIGR01261 hisB_Nterm histidino 44.4 26 0.00056 35.7 4.0 72 925-1000 73-145 (161)
366 PF04230 PS_pyruv_trans: Polys 44.1 4.2E+02 0.0092 28.2 14.5 47 543-598 237-283 (286)
367 KOG1618 Predicted phosphatase 43.9 21 0.00046 39.8 3.3 62 767-828 33-100 (389)
368 KOG0204 Calcium transporting A 43.6 86 0.0019 39.8 8.6 42 782-827 646-687 (1034)
369 PRK10826 2-deoxyglucose-6-phos 43.5 27 0.00059 37.2 4.2 49 784-837 93-141 (222)
370 PF10933 DUF2827: Protein of u 43.3 5.8E+02 0.013 29.5 24.0 119 532-663 239-362 (364)
371 TIGR01422 phosphonatase phosph 42.5 31 0.00068 37.6 4.6 48 785-836 101-148 (253)
372 TIGR01656 Histidinol-ppas hist 42.4 31 0.00067 34.3 4.2 42 955-999 101-142 (147)
373 COG4087 Soluble P-type ATPase 42.4 29 0.00062 33.9 3.6 50 773-827 18-69 (152)
374 PLN03243 haloacid dehalogenase 42.0 33 0.00072 37.9 4.7 48 785-837 111-158 (260)
375 PRK13222 phosphoglycolate phos 41.9 36 0.00078 36.1 4.8 48 784-836 94-141 (226)
376 PRK09449 dUMP phosphatase; Pro 41.5 21 0.00046 38.0 3.0 41 957-1000 152-194 (224)
377 TIGR01428 HAD_type_II 2-haloal 41.2 34 0.00075 35.6 4.5 48 785-837 94-141 (198)
378 PRK10748 flavin mononucleotide 41.0 24 0.00052 38.3 3.3 29 767-795 8-39 (238)
379 PLN02575 haloacid dehalogenase 40.6 33 0.00072 40.0 4.5 47 785-836 218-264 (381)
380 TIGR01491 HAD-SF-IB-PSPlk HAD- 40.5 42 0.00092 34.8 5.1 39 785-827 82-120 (201)
381 TIGR03333 salvage_mtnX 2-hydro 40.4 21 0.00045 38.1 2.7 39 784-826 71-109 (214)
382 COG4030 Uncharacterized protei 39.8 22 0.00047 37.7 2.6 35 956-994 191-225 (315)
383 TIGR01454 AHBA_synth_RP 3-amin 39.8 18 0.00038 38.1 2.0 41 956-999 132-172 (205)
384 TIGR02009 PGMB-YQAB-SF beta-ph 38.8 30 0.00066 35.4 3.6 46 784-836 89-134 (185)
385 COG0546 Gph Predicted phosphat 38.7 18 0.00038 38.8 1.8 43 956-1001 146-191 (220)
386 TIGR01489 DKMTPPase-SF 2,3-dik 38.5 30 0.00066 35.4 3.5 39 785-827 74-112 (188)
387 TIGR01490 HAD-SF-IB-hyp1 HAD-s 38.2 53 0.0012 34.2 5.4 40 784-827 88-127 (202)
388 KOG3120 Predicted haloacid deh 37.5 35 0.00076 36.3 3.6 52 948-1001 155-209 (256)
389 COG4087 Soluble P-type ATPase 37.1 31 0.00067 33.7 2.9 27 971-1000 92-118 (152)
390 PHA02597 30.2 hypothetical pro 37.0 17 0.00036 38.0 1.3 39 956-999 131-171 (197)
391 PRK10964 ADP-heptose:LPS hepto 36.5 2.1E+02 0.0045 32.4 10.2 46 545-599 235-280 (322)
392 PRK13478 phosphonoacetaldehyde 36.2 46 0.001 36.7 4.7 49 785-837 103-151 (267)
393 PRK13225 phosphoglycolate phos 36.2 40 0.00088 37.5 4.2 47 785-836 144-190 (273)
394 TIGR01509 HAD-SF-IA-v3 haloaci 35.0 46 0.001 33.8 4.2 47 785-837 87-133 (183)
395 PF04392 ABC_sub_bind: ABC tra 35.0 1.3E+02 0.0029 33.6 8.2 99 489-598 116-218 (294)
396 PRK13223 phosphoglycolate phos 34.4 48 0.001 36.8 4.5 48 785-837 103-150 (272)
397 TIGR03351 PhnX-like phosphonat 34.4 23 0.0005 37.6 1.9 40 957-999 147-187 (220)
398 PRK13226 phosphoglycolate phos 34.3 55 0.0012 35.1 4.8 48 785-837 97-144 (229)
399 PRK02083 imidazole glycerol ph 32.0 7E+02 0.015 27.1 15.9 53 768-826 44-97 (253)
400 PRK11590 hypothetical protein; 31.8 71 0.0015 33.9 5.1 47 786-838 98-145 (211)
401 TIGR01488 HAD-SF-IB Haloacid D 31.3 58 0.0013 33.0 4.2 39 785-827 75-113 (177)
402 PRK09552 mtnX 2-hydroxy-3-keto 30.6 29 0.00063 37.0 1.9 36 785-824 76-111 (219)
403 PRK10563 6-phosphogluconate ph 30.5 42 0.00092 35.6 3.1 29 766-794 1-32 (221)
404 PRK13015 3-dehydroquinate dehy 30.1 1.3E+02 0.0029 30.0 6.1 116 513-631 15-140 (146)
405 COG2204 AtoC Response regulato 30.0 9.8E+02 0.021 28.8 14.4 70 568-637 49-126 (464)
406 TIGR02201 heptsyl_trn_III lipo 30.0 2.8E+02 0.0061 31.6 10.0 102 476-598 183-286 (344)
407 COG0560 SerB Phosphoserine pho 29.9 51 0.0011 35.2 3.6 40 784-827 78-117 (212)
408 PRK14988 GMP/IMP nucleotidase; 29.9 60 0.0013 34.8 4.2 48 785-837 95-142 (224)
409 PRK11587 putative phosphatase; 29.8 70 0.0015 33.9 4.7 46 785-836 85-130 (218)
410 PF02947 Flt3_lig: flt3 ligand 29.0 43 0.00093 32.0 2.4 13 74-86 39-51 (135)
411 COG2327 WcaK Polysaccharide py 28.7 1E+03 0.022 28.0 30.3 70 555-633 277-350 (385)
412 KOG0206 P-type ATPase [General 28.4 46 0.00099 44.1 3.3 40 783-826 651-690 (1151)
413 PRK06698 bifunctional 5'-methy 28.3 47 0.001 39.9 3.3 39 956-999 386-424 (459)
414 TIGR01990 bPGM beta-phosphoglu 27.5 29 0.00063 35.5 1.2 40 956-998 142-181 (185)
415 COG0757 AroQ 3-dehydroquinate 27.4 2.5E+02 0.0055 27.8 7.3 88 507-597 9-98 (146)
416 TIGR01494 ATPase_P-type ATPase 27.2 1E+02 0.0022 37.5 5.9 53 770-826 328-386 (499)
417 PRK08942 D,D-heptose 1,7-bisph 26.7 38 0.00082 34.9 1.9 39 958-999 106-144 (181)
418 PF14980 TIP39: TIP39 peptide 26.4 44 0.00095 26.3 1.6 15 4-18 36-50 (51)
419 PRK06698 bifunctional 5'-methy 26.3 69 0.0015 38.5 4.3 49 784-837 331-379 (459)
420 PF13419 HAD_2: Haloacid dehal 25.9 37 0.0008 33.8 1.6 42 955-999 133-174 (176)
421 TIGR02244 HAD-IG-Ncltidse HAD 25.7 1.1E+02 0.0024 35.2 5.5 37 785-825 186-223 (343)
422 COG1887 TagB Putative glycosyl 25.3 1.1E+03 0.024 27.7 13.8 164 471-664 204-384 (388)
423 KOG0207 Cation transport ATPas 25.3 1.5E+02 0.0032 38.1 6.7 55 768-826 702-762 (951)
424 TIGR01088 aroQ 3-dehydroquinat 25.2 1.8E+02 0.004 28.9 6.0 121 507-631 8-138 (141)
425 COG0859 RfaF ADP-heptose:LPS h 25.1 2.5E+02 0.0053 32.2 8.3 100 475-599 176-278 (334)
426 PF05686 Glyco_transf_90: Glyc 25.1 2.9E+02 0.0063 32.6 9.0 85 583-667 229-318 (395)
427 PRK06769 hypothetical protein; 25.0 1.2E+02 0.0026 31.1 5.2 41 957-1000 95-135 (173)
428 TIGR01493 HAD-SF-IA-v2 Haloaci 25.0 44 0.00096 33.9 2.0 24 771-794 1-27 (175)
429 PLN02940 riboflavin kinase 24.6 76 0.0016 37.2 4.0 49 785-838 95-144 (382)
430 PLN02779 haloacid dehalogenase 24.6 44 0.00096 37.4 2.0 41 958-1001 205-245 (286)
431 PF01975 SurE: Survival protei 24.6 1E+02 0.0022 32.5 4.6 37 166-220 1-37 (196)
432 TIGR01549 HAD-SF-IA-v1 haloaci 24.5 1E+02 0.0023 30.4 4.5 44 787-836 68-111 (154)
433 PRK09449 dUMP phosphatase; Pro 24.0 89 0.0019 33.1 4.2 47 785-837 97-143 (224)
434 TIGR02254 YjjG/YfnB HAD superf 23.5 1.1E+02 0.0023 32.3 4.7 47 785-837 99-145 (224)
435 TIGR00715 precor6x_red precorr 22.9 4.9E+02 0.011 28.7 9.7 86 536-631 166-255 (256)
436 cd00466 DHQase_II Dehydroquina 22.9 1.9E+02 0.0042 28.7 5.7 121 507-631 8-138 (140)
437 TIGR01990 bPGM beta-phosphoglu 22.8 1E+02 0.0022 31.4 4.2 47 784-837 88-134 (185)
438 KOG2882 p-Nitrophenyl phosphat 22.3 78 0.0017 35.4 3.2 43 960-1004 229-272 (306)
439 PF12689 Acid_PPase: Acid Phos 22.3 1.1E+02 0.0024 31.5 4.2 34 947-983 101-134 (169)
440 TIGR01494 ATPase_P-type ATPase 21.8 51 0.0011 40.1 2.0 39 956-1001 394-432 (499)
441 TIGR01361 DAHP_synth_Bsub phos 21.7 5.5E+02 0.012 28.4 9.8 111 480-598 28-139 (260)
442 PRK10916 ADP-heptose:LPS hepto 21.0 3.4E+02 0.0075 31.0 8.5 44 546-598 244-287 (348)
443 TIGR01545 YfhB_g-proteo haloac 21.0 1.6E+02 0.0034 31.4 5.2 47 785-837 96-143 (210)
444 TIGR01509 HAD-SF-IA-v3 haloaci 20.8 75 0.0016 32.2 2.7 39 958-999 143-181 (183)
445 cd07018 S49_SppA_67K_type Sign 20.7 5.8E+02 0.012 27.3 9.6 59 732-811 28-87 (222)
446 PF08496 Peptidase_S49_N: Pept 20.6 1.5E+02 0.0034 30.0 4.7 16 767-782 96-111 (155)
447 TIGR02252 DREG-2 REG-2-like, H 20.2 1.3E+02 0.0027 31.4 4.3 48 785-838 107-154 (203)
448 COG2179 Predicted hydrolase of 20.2 1.5E+02 0.0033 30.3 4.5 68 916-986 44-123 (175)
No 1
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=1.6e-209 Score=1897.35 Aligned_cols=1041 Identities=75% Similarity=1.219 Sum_probs=942.3
Q ss_pred CCCCchhhHHHHHHHhcCCCCCcccch--hhhhccCCCCCcchhhhhhhcccCcchhhHHHHHHHhhcChhhhhhhhhhh
Q 001557 1 MAGNDWVNSYLEAILDVGPGIDDAKSS--LLLRERGRFSPTRYFVEQVITGFDETDLHRSWIRAAATRSPQERNTRLENM 78 (1054)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (1054)
||||||||||||||||+|+|+++++++ +++||+|+||||||||||||||||||||||||+||+|||||||||||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (1050)
T TIGR02468 1 MAGNDWINSYLEAILDVGPGLDDAKSSALLLLRERGRFSPTRYFVEEVITGFDETDLHRTWVKAVATRSPQERNTRLENM 80 (1050)
T ss_pred CCcchHHHHHHHHHHhcCCCcccccccccccccccCccCCceeeEEeecccccchhhhhHHHHHHhhcChhhhhhhhhhh
Confidence 999999999999999999999999998 889999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhhhhhhhchHHHHHHHHHHHHHhhccchhhhhhhhccCCCCCCCCCCccccCCCCC--CCCCCCCCchhhhhh
Q 001557 79 CWRIWNLARKKKQIEGEEAQRKAKRRLERERGRKEASADMSEDLSEGDKGDVSGELSAHGGST--RGRMPRISSVDTMEN 156 (1054)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 156 (1054)
|||||||||||||||||+|||+||||+|||+||||||+|||||||||||+|.+++.++++++. +++|||++|++.|+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (1050)
T TIGR02468 81 CWRIWNLARKKKQLEWEEAQRLAKRRLERERGRREATADMSEDLSEGEKGDVAGDISVAGGEPSTKGRLPRISSNLEMET 160 (1050)
T ss_pred HHHHHHHhhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhHhhcCCcccCcccccccccCCCccccccccccccchhhc
Confidence 999999999999999999999999999999999999999999999999999999999998664 799999999999999
Q ss_pred hhhhccCcceEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccc
Q 001557 157 WAIQYKEKKLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEML 236 (1054)
Q Consensus 157 ~~~~~~~~~mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l 236 (1054)
|+++++.++|||++||.||+|||+||++||++|||||.+||.+||++|+++||||+|+|+|++..+|.++++|++|.+++
T Consensus 161 ~~~~~~~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~ 240 (1050)
T TIGR02468 161 WSDQQKEKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEML 240 (1050)
T ss_pred chhhcccCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999899999999999999
Q ss_pred ccccccccccccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCC
Q 001557 237 NRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYAD 316 (1054)
Q Consensus 237 ~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~ 316 (1054)
++...+++.+++...+|++|+|+|+||.++|++|+.+|||+.+|++.++.++.++.+.|++++..+++.+|||||+|||+
T Consensus 241 ~~~~~~~~~~~~~~~~g~rIvRip~GP~~~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw~ 320 (1050)
T TIGR02468 241 TPRSSENDGDEMGESSGAYIIRIPFGPRDKYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYAD 320 (1050)
T ss_pred cccccccccccccCCCCeEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcch
Confidence 88777777788889999999999999997799999999999999999999999999999999888777789999999999
Q ss_pred chHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhh
Q 001557 317 AGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLY 396 (1054)
Q Consensus 317 a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y 396 (1054)
+|++++.+++.+++|+|+|+|+++..+..+++.+|..+...++..|++.+|+.+|+.++..||.|||+|++++++|+.+|
T Consensus 321 sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~lY 400 (1050)
T TIGR02468 321 AGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGLY 400 (1050)
T ss_pred HHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHHh
Confidence 99999999999999999999999999998888888877778888999999999999999999999999999999999999
Q ss_pred cCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCc
Q 001557 397 DGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKP 476 (1054)
Q Consensus 397 ~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (1054)
+.++|.++++||+|+.+||+|||++++++.|||||||++.|.|.....+..............+.++.++++|+..+++|
T Consensus 401 ~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~~~pdkp 480 (1050)
T TIGR02468 401 DGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEIMRFFTNPRKP 480 (1050)
T ss_pred ccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchhhHHHHhhcccCCCc
Confidence 99999999999999999999999999999999999999999986543322211111123345677888999999999999
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCc
Q 001557 477 MILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSD 556 (1054)
Q Consensus 477 ~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~d 556 (1054)
+|+++||+++.||+..||+||..++.+.+.+++.+|+|++++.+.+......+..++.++++++++.++|.|+|+++.++
T Consensus 481 vIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~FlG~v~~ed 560 (1050)
T TIGR02468 481 MILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYPKHHKQSD 560 (1050)
T ss_pred EEEEEcCCccccCHHHHHHHHHHhHhhccCCCEEEEEecCchhhhhhccchHHHHHHHHHHHHhCCCCeEEecCCCCHHH
Confidence 99999999999999999999999976556678878889988877777667778899999999999999999999999999
Q ss_pred HHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHH
Q 001557 557 VPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQL 636 (1054)
Q Consensus 557 l~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~ 636 (1054)
++.+|+.|++++|+||+||++||||++++||||||+|||+|+.||+.|+|.++.+|++|+|.|+++|+++|.+++++++.
T Consensus 561 vp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~Dpel 640 (1050)
T TIGR02468 561 VPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADKQL 640 (1050)
T ss_pred HHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhCHHH
Confidence 99999999666789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhcCCCCCCCC-CCCCCCCCCCCCCCccccccccccccccccCCCCCCC
Q 001557 637 WERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQRQPRWQRSD-DGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGG 715 (1054)
Q Consensus 637 ~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~~~~~~~~~~~~-~~~~~s~~~~~~~~lr~~~~~~~~~~~~~d~~~~~~~ 715 (1054)
+++|++++++.+++|+|+.++++|++.+..+..++|+|++.. .+.+.++++|+.+++++++||| |+||+||+.....
T Consensus 641 r~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~ 718 (1050)
T TIGR02468 641 WAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEASEDESPGDSLRDIQDIS--LNLSVDGDKESNN 718 (1050)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccCcccccccccccccccccCccccccccccch--hhccccccccccc
Confidence 999999999999889999999999999999999999988643 2345667889999999999999 6677777644321
Q ss_pred -CCCCCCcchhhhhccchhhhHHHHHHhhccccCCCccCccCccCCCCCcccCCCEEEEEEecCCCChhhHHHHHHHHHH
Q 001557 716 -STLDNSLDTEENAVTGKNKLENAVLALSNRTIGGTQKADHNVASGKFPALRRRKYVFVIAADCDTTSDFLEIIKKVVEA 794 (1054)
Q Consensus 716 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~kkLiv~DiDGTL~~~i~~~~~~al~~ 794 (1054)
+.+.+ ......|+..++.+++.++++...++.++.+++++.+|||.++++++|||+++|++.+....+.+++++++
T Consensus 719 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~D~d~~~~~~~~l~~~~~~ 795 (1050)
T TIGR02468 719 GSSNVE---GSGPPADRVAKIENAVRSWSKSPKGSSAKAQQGSGAGKYPALRRRKRLFVIAVDCYDDKDLLQIIKNIFEA 795 (1050)
T ss_pred cccccc---cccchhhHHHHHHHHHhhccccccccccccccccccccCccccccceEEEEEeccCCCCChHHHHHHHHHH
Confidence 01111 11123355666677777777655567889999999999999999999999555544445577778888888
Q ss_pred HhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcCCCC-CCCCCCCccccCccchhhhccccCh
Q 001557 795 AGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSSS-TEDNHGLPFLVDLDYRFHTEYRWGG 873 (1054)
Q Consensus 795 l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~~~~-~~~~~~~~~~~d~~~~~~i~~~w~~ 873 (1054)
+++....+.+.|+|+|||++.++.+++++.++++.+||++||++|++|||+..+ .++. .+.+|..|+.||.++|.+
T Consensus 796 ~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~vGTeIyy~~~~~~~~~---~~~~D~~w~~hI~~rW~g 872 (1050)
T TIGR02468 796 VRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALICNSGSELYYPSLNGSEEG---KLVADQDYHSHIEYRWGG 872 (1050)
T ss_pred HhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCcceeccCcCCCCCC---CceECHHHHHHHHccCCc
Confidence 874333467999999999999999999999997558999999999999997422 1112 678999999999999999
Q ss_pred hhHHHHHHHhhhhccCCCCcc-CcccccccccCcceEEEEEecCCCCCccHHHHHHHHHHhcCeEEEEEeeCCeEEEEec
Q 001557 874 EGLRKTLVRWAASVNDKKGEE-GKIVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIP 952 (1054)
Q Consensus 874 e~l~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~kis~~~~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p 952 (1054)
+.+++++.+++....+.++++ +.++.++...++.||++|++.++...+.+++|++.|++++++|+++||+++.+|||+|
T Consensus 873 e~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k~SY~v~d~~~~~~v~elr~~Lr~~gLr~~~iys~~~~~LDVlP 952 (1050)
T TIGR02468 873 EGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDHCYAFKVKDPSKVPPVKELRKLLRIQGLRCHAVYCRNGTRLNVIP 952 (1050)
T ss_pred HHHHHHHHHHhhhcccccccccccceecChhhCCCceEEEEecCcccCccHHHHHHHHHhCCCceEEEeecCCcEeeeee
Confidence 999999999998766666555 4578888899999999999888888889999999999999999999999866999999
Q ss_pred CCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEecCcc-hhHHhhhhccCCCcccccccCCCceEE
Q 001557 953 VLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVG-ESARKLHANRNYSLEDVISFDSHNVIQ 1031 (1054)
Q Consensus 953 ~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMgNa~-~~~~~~~~~~~~~~~d~~~~~~~~~~~ 1031 (1054)
.+||||+||+||+.+|||++++|+||+||++||||++||.+.+++|++++.+ .+++.+|+++||+++||||.+||||.+
T Consensus 953 ~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~g~~~~~s~~l~~~~sY~~eDVvp~dspni~~ 1032 (1050)
T TIGR02468 953 LLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKGVVSRGSEQLHANRSYPLDDVVPLDSPNIVQ 1032 (1050)
T ss_pred CCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEecccccchhhhcccCCCcccccccCCCCCeEe
Confidence 9999999999999999999999999999999999999999999999999988 566888899999999999999999999
Q ss_pred eccccCHHHHHHHHHHhc
Q 001557 1032 VDEACDSYDIRASLEKLG 1049 (1054)
Q Consensus 1032 ~t~~~~~~gI~~al~~~~ 1049 (1054)
++++|..++|..||++||
T Consensus 1033 ~~~~~~~~di~~aL~~l~ 1050 (1050)
T TIGR02468 1033 ATGGSSSDDISDALKKLS 1050 (1050)
T ss_pred ecCCCCHHHHHHHHHhcC
Confidence 988999999999999986
No 2
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=1.4e-55 Score=533.17 Aligned_cols=468 Identities=28% Similarity=0.478 Sum_probs=355.2
Q ss_pred hhhhhhhccCcceEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHH--------hcCCCce----EEEEEecCcC
Q 001557 154 MENWAIQYKEKKLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARAL--------GSMPGVY----RVDLLTRQVS 221 (1054)
Q Consensus 154 ~~~~~~~~~~~~mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aL--------a~~~Gv~----~V~vvt~~~~ 221 (1054)
++++-... +|.|||++||.||+++++| .+|+ ||||||..||.+||++| +++ | | +|+|+|+.+.
T Consensus 245 ~e~f~~~~-p~~~rIa~lS~Hg~~~~~~-~lG~-~DtGGq~vYV~elaraL~~~~~~~La~~-G-~~v~~~V~I~TR~~~ 319 (784)
T TIGR02470 245 LEAFLGRI-PMVFNVVILSPHGYFGQEN-VLGL-PDTGGQVVYILDQVRALENEMLQRIKLQ-G-LEITPKILIVTRLIP 319 (784)
T ss_pred HHHHHhhC-CccceEEEEecccccCCcc-ccCC-CCCCCceeHHHHHHHHHHHHHHHHHHhc-C-CCccceEEEEecCCC
Confidence 44443333 7789999999999998888 5997 79999999999999985 577 8 7 8889999874
Q ss_pred CCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCC-----cccccccCCCChHHHHHHHHHHHHHHHHHHh
Q 001557 222 APDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKD-----KYVQKELLWPHIPEFVDAALTHIIQISKVLG 296 (1054)
Q Consensus 222 ~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~-----~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~ 296 (1054)
+.. ...|.++.+. +...+|++|+|+|++|.. +|++|+.+|||+..|.+.+..++..-
T Consensus 320 ~~~-~~~~~~~~e~------------~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~----- 381 (784)
T TIGR02470 320 DAE-GTTCNQRLEK------------VYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAE----- 381 (784)
T ss_pred Ccc-cccccccccc------------ccCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-----
Confidence 322 2334444433 344679999999999853 47899999999999999887766421
Q ss_pred hhhcCCCCCcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhc
Q 001557 297 EQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLD 376 (1054)
Q Consensus 297 ~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~ 376 (1054)
.+.+||+||+|||++|++|..+++.+|||+++|.|+++..+.. ..|. .+......|++..++.+|..++.
T Consensus 382 ------~~~~pDlIHahy~d~glva~lla~~lgVP~v~t~HsL~~~K~~---~~g~-~~~~~e~~~~~~~r~~ae~~~~~ 451 (784)
T TIGR02470 382 ------LQGKPDLIIGNYSDGNLVASLLARKLGVTQCTIAHALEKTKYP---DSDI-YWQEFEDKYHFSCQFTADLIAMN 451 (784)
T ss_pred ------cCCCCCEEEECCCchHHHHHHHHHhcCCCEEEECCcchhhccc---cccc-ccccchhHHHhhhhhhHHHHHHh
Confidence 1146999999999999999999999999999999999776632 2222 33334557788888989999999
Q ss_pred cCCEEEecCHHHHH------HHHhhhcCCCh-HHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCccc
Q 001557 377 ASEIVITSTRQEIE------EQWRLYDGFDP-VLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVE 449 (1054)
Q Consensus 377 ~ad~Vi~~S~~~~~------~~~~~y~~~~~-~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~ 449 (1054)
.||.|||+|.+++. .|+..|..|.. .+ .++ ++-.+.+.+|+.|||||+|...|.|........ .
T Consensus 452 ~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~L-----y~v---vnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~-~ 522 (784)
T TIGR02470 452 AADFIITSTYQEIAGTKDSVGQYESHQAFTMPGL-----YRV---VHGIDVFDPKFNIVSPGADESIYFPYSDKEKRL-T 522 (784)
T ss_pred cCCEEEECcHHHhhhhhhhhhhhhhcccccccce-----eee---ecCccCCcCCeEEECCCcChhhcCCCCchhhhh-h
Confidence 99999999998865 34444544432 10 011 122333567999999999999998754321100 0
Q ss_pred ccCCC--CCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCC-chhhhhch
Q 001557 450 RDEGS--PASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDD-IDEMSGTN 526 (1054)
Q Consensus 450 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~-~~~~~~~~ 526 (1054)
..... .....+....+...++..+++|+|+++||+++.||++.+++||..+..+.+..+++ |+|++.+ ......+.
T Consensus 523 ~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LV-IVGGg~~~~~s~d~ee 601 (784)
T TIGR02470 523 NLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLV-VVAGKLDAKESKDREE 601 (784)
T ss_pred hhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEE-EEeCCcccccccchhH
Confidence 00000 00000111112223344678999999999999999999999999876555555663 5565432 22222233
Q ss_pred HHHHHHHHHHHHHcCCCCCEEeCCCC-CCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccc
Q 001557 527 AALLLSILKLIDKYDLYGQVAYPKHH-KQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDI 605 (1054)
Q Consensus 527 ~~~~~~i~~l~~~~~l~~~V~~~g~~-~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~ei 605 (1054)
.....++.++++++++.++|.|+|.. +..++.++|+.++.++|+||+||++|+||++++||||||+|||+|+.||+.|+
T Consensus 602 ~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~Ei 681 (784)
T TIGR02470 602 QAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEI 681 (784)
T ss_pred HHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHH
Confidence 34678899999999999999999975 67789999986544458999999999999999999999999999999999999
Q ss_pred eeeCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHH
Q 001557 606 HRVLDNGLLVDPHDQQSIADALLKLV----SDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRI 664 (1054)
Q Consensus 606 v~~~~~Gllv~p~d~~~la~aI~~ll----~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l 664 (1054)
|.++.+|++|+|.|+++++++|.+++ +|++.|+++++++++.+ ++|||+.++++++.+.
T Consensus 682 V~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 682 IQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred hcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 99999999999999999999999886 69999999999999999 7999999999999876
No 3
>PLN00142 sucrose synthase
Probab=100.00 E-value=1.5e-54 Score=523.74 Aligned_cols=460 Identities=28% Similarity=0.474 Sum_probs=346.3
Q ss_pred CcceEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHH--------HHHhcCCCceEE----EEEecCcCCCCCCCccC
Q 001557 163 EKKLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELA--------RALGSMPGVYRV----DLLTRQVSAPDVDWTYA 230 (1054)
Q Consensus 163 ~~~mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa--------~aLa~~~Gv~~V----~vvt~~~~~p~~~~~~~ 230 (1054)
+|-|||++||+||++++.+ ++|+ ||||||..||.++| ++|+++ | ++| +|+||.+.+.. ...|.
T Consensus 277 p~~~~i~~iS~Hg~~~~~~-~lG~-~DtGGQ~vYVl~~aral~~el~~~l~~~-G-~~v~~~v~i~TR~i~~~~-~~~~~ 351 (815)
T PLN00142 277 PMVFNVVIFSPHGYFGQAN-VLGL-PDTGGQVVYILDQVRALENEMLLRIKQQ-G-LDIKPQILIVTRLIPDAK-GTTCN 351 (815)
T ss_pred hHhHhhheecccccccccc-cCCC-CCCCCceehHHHHHHHHHHHHHHHHHhc-C-CCccceeEEEEeccCCcc-CCccc
Confidence 6778999999999999988 6998 99999999998766 567778 7 765 59999875444 34556
Q ss_pred CcccccccccccccccccCCCCCeEEEEccCCCCC----cccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCc
Q 001557 231 EPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKD----KYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIW 306 (1054)
Q Consensus 231 ~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~----~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~ 306 (1054)
++.+.+ ...++++|+|+|++|.. ++++|+.+|||+..|.+.+..++... ...+
T Consensus 352 ~~~e~v------------~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~~~~-----------~~~~ 408 (815)
T PLN00142 352 QRLEKV------------SGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEILAE-----------LQGK 408 (815)
T ss_pred Ccceec------------cCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHHHHh-----------cCCC
Confidence 655443 44679999999999953 56699999999999999887776431 1145
Q ss_pred ceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCH
Q 001557 307 PVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTR 386 (1054)
Q Consensus 307 pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~ 386 (1054)
||+||+|||++|++|..+++.+|||+|+|+|+++..+.. ..| ..+......|++..|+.+|..++..||.||++|.
T Consensus 409 PDlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~---~~~-~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIasT~ 484 (815)
T PLN00142 409 PDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYP---DSD-IYWKKFDDKYHFSCQFTADLIAMNHADFIITSTY 484 (815)
T ss_pred CCEEEECCccHHHHHHHHHHHhCCCEEEEcccchhhhcc---ccC-CcccccchhhhhhhchHHHHHHHHhhhHHHhCcH
Confidence 999999999999999999999999999999999877753 222 3444566788888999999999999999999999
Q ss_pred HHHH------HHHhhhcCCC-hHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCC--CCC
Q 001557 387 QEIE------EQWRLYDGFD-PVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGS--PAS 457 (1054)
Q Consensus 387 ~~~~------~~~~~y~~~~-~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~--~~~ 457 (1054)
+++. .|+..|..|. |.+ +|+-.| .+.+.+++.|||+|+|...|.|...... ....+-+. ...
T Consensus 485 qEi~g~~~~i~qy~sh~~f~~p~L-----~rvv~G---Id~~~~ki~VVppGvD~~~F~P~~~~~~-rl~~l~n~I~~~l 555 (815)
T PLN00142 485 QEIAGSKDTVGQYESHTAFTLPGL-----YRVVHG---IDVFDPKFNIVSPGADMSIYFPYTEKQK-RLTSLHPSIEELL 555 (815)
T ss_pred HHHhcccchhhhhhcccccccchh-----hhhhcc---ccccccCeeEECCCCChhhcCCCChHHh-hHHhhcccchhhc
Confidence 9886 3444444432 332 233333 3345669999999999999986432110 00000000 000
Q ss_pred CCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecC-CCchhhhhchHHHHHHHHHH
Q 001557 458 PDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNR-DDIDEMSGTNAALLLSILKL 536 (1054)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~-~~~~~~~~~~~~~~~~i~~l 536 (1054)
..+....+...++..+++|+|+++||+++.||++.+|+|+..+.++.+..++ +|+|++ +.......+......++.++
T Consensus 556 ~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~L-VIVGgg~d~~~s~d~ee~~el~~L~~L 634 (815)
T PLN00142 556 YSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNL-VVVGGFIDPSKSKDREEIAEIKKMHSL 634 (815)
T ss_pred CChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEE-EEEECCccccccccHHHHHHHHHHHHH
Confidence 0111111222233456788999999999999999999999988654444455 356665 22111111122345778899
Q ss_pred HHHcCCCCCEEeCCCCC-CCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEe
Q 001557 537 IDKYDLYGQVAYPKHHK-QSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLV 615 (1054)
Q Consensus 537 ~~~~~l~~~V~~~g~~~-~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv 615 (1054)
++++++.++|.|.|.+. .....++|+..+...|+||+||++||||++++||||||+|||+|+.||+.|+|.++.+|++|
T Consensus 635 a~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV 714 (815)
T PLN00142 635 IEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHI 714 (815)
T ss_pred HHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEe
Confidence 99999999999998654 33344444422111299999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHH
Q 001557 616 DPHDQQSIADALLKLV----SDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRI 664 (1054)
Q Consensus 616 ~p~d~~~la~aI~~ll----~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l 664 (1054)
+|.|+++++++|.+++ +|++.|++++++|++.+ ++|||+.++++++++.
T Consensus 715 ~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 715 DPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999999999987654 69999999999999999 7999999999999866
No 4
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=6.4e-52 Score=490.83 Aligned_cols=436 Identities=52% Similarity=0.884 Sum_probs=341.1
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCce--EEEEEecCcCCCCCCCccCCcccccccccccc
Q 001557 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVY--RVDLLTRQVSAPDVDWTYAEPSEMLNRKNTEN 243 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~--~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~ 243 (1054)
+||++||.||++++.|+.+|+.|+.||++.|+.+|+++|+++ | | +|+|+|+....+.+...|..+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~~La~~L~~~-G-~~~~V~v~t~~~~~~~~~~~~~~~~~--------- 69 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVLELARALARR-S-EVEQVDLVTRLIKDAKVSPDYAQPIE--------- 69 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHHHHHHHHHhC-C-CCcEEEEEeccccCcCCCCccCCCee---------
Confidence 589999999999999999999999999999999999999999 7 6 99999976432222222322221
Q ss_pred cccccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHH
Q 001557 244 LMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAAL 323 (1054)
Q Consensus 244 ~~~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~ 323 (1054)
...+|+.|+|+|+++. .+..+..+|+++..|...+...+.+ ...+|||||+|++.++.++.+
T Consensus 70 -----~~~~gv~v~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~------------~~~~~DvIH~h~~~~~~~~~~ 131 (439)
T TIGR02472 70 -----RIAPGARIVRLPFGPR-RYLRKELLWPYLDELADNLLQHLRQ------------QGHLPDLIHAHYADAGYVGAR 131 (439)
T ss_pred -----EeCCCcEEEEecCCCC-CCcChhhhhhhHHHHHHHHHHHHHH------------cCCCCCEEEEcchhHHHHHHH
Confidence 1136999999998876 4555566677766655444443321 013599999999888889988
Q ss_pred HHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHH
Q 001557 324 LSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVL 403 (1054)
Q Consensus 324 l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l 403 (1054)
+++..++|+|+|.|+++......+...+. ....+...|.+..++..|+.+++.+|.||++|..+..++...+.++.+
T Consensus 132 ~~~~~~~p~V~t~H~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~-- 208 (439)
T TIGR02472 132 LSRLLGVPLIFTGHSLGREKRRRLLAAGL-KPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQYALYDSYQP-- 208 (439)
T ss_pred HHHHhCCCEEEecccccchhhhhcccCCC-ChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHHHHHhccCCCc--
Confidence 99999999999999875543222222222 222233344555666678889999999999998766655444433332
Q ss_pred HHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeC
Q 001557 404 ERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALAR 483 (1054)
Q Consensus 404 ~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgR 483 (1054)
.++.+||||||.+.|.|..... ........+++++..++.++|+++||
T Consensus 209 -------------------~ki~vIpnGvd~~~f~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~i~~vGr 256 (439)
T TIGR02472 209 -------------------ERMQVIPPGVDLSRFYPPQSSE-------------ETSEIDNLLAPFLKDPEKPPILAISR 256 (439)
T ss_pred -------------------cceEEECCCcChhhcCCCCccc-------------cchhHHHHHHhhccccCCcEEEEEcC
Confidence 3899999999999998643111 11112233344555677889999999
Q ss_pred CCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHH
Q 001557 484 PDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRL 563 (1054)
Q Consensus 484 ld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~ 563 (1054)
+.+.||++.+|+||..+..+.+.+++.+|+|++++.+.+.....++...+..+++++++.++|.|+|+++.++++.+|+.
T Consensus 257 l~~~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~~~~ 336 (439)
T TIGR02472 257 PDRRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRL 336 (439)
T ss_pred CcccCCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHHHHH
Confidence 99999999999999876433444667667788887666665556667788889999999999999999999999999998
Q ss_pred hhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 001557 564 AAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQN 643 (1054)
Q Consensus 564 Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~ 643 (1054)
|+...|+||+||..|+||++++||||||+|||+|+.||+.|++.++.+|++|+|.|+++++++|.+++++++.+++++++
T Consensus 337 a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~ 416 (439)
T TIGR02472 337 AARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSDSSQWQLWSRN 416 (439)
T ss_pred HhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 74445899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH-hcCCHHHHHHHHHHHHH
Q 001557 644 GLKNI-HQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 644 ~~~~v-~~fsw~~~a~~yl~~l~ 665 (1054)
+++.+ ++|||+.++++|+++++
T Consensus 417 a~~~~~~~fsw~~~~~~~~~l~~ 439 (439)
T TIGR02472 417 GIEGVRRHYSWDAHVEKYLRILQ 439 (439)
T ss_pred HHHHHHHhCCHHHHHHHHHHHhC
Confidence 99998 79999999999998863
No 5
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=3.2e-49 Score=492.13 Aligned_cols=569 Identities=14% Similarity=0.139 Sum_probs=392.0
Q ss_pred ccccCCCChHH----------HHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHcc-CCCCEEEEeC
Q 001557 269 QKELLWPHIPE----------FVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGA-LNVPMVFTGH 337 (1054)
Q Consensus 269 ~k~~l~~~l~~----------f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~-~~iP~V~t~H 337 (1054)
.+..+||.+.. ...........++..+.+.+.. -|+|..|++...+++.++.+. ...++-|..|
T Consensus 91 ~n~~lWp~~H~~~~~~~~~~~~w~~Y~~vN~~fA~~~~~~~~~-----~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH 165 (726)
T PRK14501 91 CNSTLWPLFHYFPEYTEFEDRFWESYERVNQRFAEAIAAIARP-----GDVVWVHDYQLMLLPAMLRERLPDARIGFFLH 165 (726)
T ss_pred hhccccchhcccCcccCcCHHHHHHHHHHHHHHHHHHHHhcCC-----CCEEEEeCchhhhHHHHHHhhCCCCcEEEEee
Confidence 45667775432 2223333344455666655332 389999998777888887654 3678999999
Q ss_pred CCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHh-Hhcccc
Q 001557 338 SLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRAR-IKRGVS 416 (1054)
Q Consensus 338 ~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r-~~~gv~ 416 (1054)
-.++...- +. ...+.+.| -..+-.+|+|-+.|...+..+..... +.+... ...++.
T Consensus 166 ~pfP~~~~-f~------------~lp~~~~l---l~~ll~~Dligf~t~~~~r~Fl~~~~-------~~l~~~~~~~~~~ 222 (726)
T PRK14501 166 IPFPSFEV-FR------------LLPWREEI---LEGLLGADLIGFHTYDYVRHFLSSVL-------RVLGYETELGEIR 222 (726)
T ss_pred CCCCChHH-Hh------------hCCChHHH---HHHHhcCCeEEeCCHHHHHHHHHHHH-------HHcCCccCCCeEE
Confidence 87764421 10 01111111 23578999999999988877655322 111100 122455
Q ss_pred cCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHH
Q 001557 417 CHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKA 496 (1054)
Q Consensus 417 ~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A 496 (1054)
..|+.. ++.++|+|||++.|.+..... ........++.. .+++++|+++||+++.||+..+|+|
T Consensus 223 ~~gr~~-~v~v~p~GID~~~f~~~~~~~-------------~~~~~~~~lr~~--~~~~~~il~VgRl~~~Kgi~~~l~A 286 (726)
T PRK14501 223 LGGRIV-RVDAFPMGIDYDKFHNSAQDP-------------EVQEEIRRLRQD--LRGRKIILSIDRLDYTKGIPRRLLA 286 (726)
T ss_pred ECCEEE-EEEEEECeEcHHHHHHHhcCc-------------hHHHHHHHHHHH--cCCCEEEEEecCcccccCHHHHHHH
Confidence 556554 799999999999998642110 000111112222 2577899999999999999999999
Q ss_pred HHhcccccCCC--cEEE-EEec----C-CCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCC
Q 001557 497 FGECRPLRELA--NLTL-IMGN----R-DDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTK 568 (1054)
Q Consensus 497 ~~~l~~~~~~~--~l~L-IiG~----~-~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~ 568 (1054)
|+.+.+.++.. +++| ++|. + +++++++....+..++|+...+..++.+.+++.+++++++++++|+.|
T Consensus 287 ~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~a---- 362 (726)
T PRK14501 287 FERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAA---- 362 (726)
T ss_pred HHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhc----
Confidence 99987555543 3444 4442 2 445566666666667777777777777888899999999999999999
Q ss_pred cEEEecCCCCCCcHHHHHHHHc-----CCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHH
Q 001557 569 GVFINPAFIEPFGLTLIEAAAY-----GLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDK-QLWERCRQ 642 (1054)
Q Consensus 569 dv~v~ps~~Egfgl~l~EAmA~-----G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~-~~~~~~~~ 642 (1054)
|+||+||++||||++++||||| |+||+++.+|++.+++ +|++|+|+|++++|++|.++|+++ +++.+..+
T Consensus 363 Dv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~----~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~ 438 (726)
T PRK14501 363 DVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA----EALLVNPNDIEGIAAAIKRALEMPEEEQRERMQ 438 (726)
T ss_pred cEEEecccccccCcccceEEEEcCCCCceEEEecccchhHHhC----cCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 9999999999999999999999 6689999999999884 599999999999999999999965 45555556
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCc
Q 001557 643 NGLKNIHQFSWPEHCKSYLSRISSCKQRQPRWQRSDDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGGSTLDNSL 722 (1054)
Q Consensus 643 ~~~~~v~~fsw~~~a~~yl~~l~~~~~~~~~~~~~~~~~~~s~~~~~~~~lr~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 722 (1054)
++++.+..|||..|+++|++.|.++...+....... +.
T Consensus 439 ~~~~~v~~~~~~~w~~~~l~~l~~~~~~~~~~~~~~--------------------~~---------------------- 476 (726)
T PRK14501 439 AMQERLRRYDVHKWASDFLDELREAAEKNKAFASKP--------------------IT---------------------- 476 (726)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHhhhhcccccc--------------------CC----------------------
Confidence 788888899999999999999998765432111000 00
Q ss_pred chhhhhccchhhhHHHHHHhhccccCCCccCccCccCCCCCcccCCCEEEEEEecCCCC--------hhhHHHHHHHHHH
Q 001557 723 DTEENAVTGKNKLENAVLALSNRTIGGTQKADHNVASGKFPALRRRKYVFVIAADCDTT--------SDFLEIIKKVVEA 794 (1054)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~kkLiv~DiDGTL~--------~~i~~~~~~al~~ 794 (1054)
....+.++.+|+.++ +|||++|+||||. ..+++.++++|++
T Consensus 477 ---------~~~~~~~~~~y~~~~----------------------~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~ 525 (726)
T PRK14501 477 ---------PAAAEEIIARYRAAS----------------------RRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRR 525 (726)
T ss_pred ---------ccCHHHHHHHHHhcc----------------------ceEEEEecCccccCCCCCcccCCCCHHHHHHHHH
Confidence 112456777776633 4999999999993 2478999999999
Q ss_pred HhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcCCCCCCCCCCCccccCccchhh--hccccC
Q 001557 795 AGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSSSTEDNHGLPFLVDLDYRFH--TEYRWG 872 (1054)
Q Consensus 795 l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~~~~~~~~~~~~~~~d~~~~~~--i~~~w~ 872 (1054)
|.++ +|+.|+|+|||++..+.+++..+++ ++||+||++|+.+++ .|... ....|
T Consensus 526 L~~d---~g~~V~ivSGR~~~~l~~~~~~~~l------~liaenG~~i~~~~~--------------~w~~~~~~~~~w- 581 (726)
T PRK14501 526 LAAD---PNTDVAIISGRDRDTLERWFGDLPI------HLVAEHGAWSRAPGG--------------EWQLLEPVATEW- 581 (726)
T ss_pred HHcC---CCCeEEEEeCCCHHHHHHHhCCCCe------EEEEeCCEEEeCCCC--------------ceEECCCcchhH-
Confidence 9986 6899999999999999999987665 699999999986541 12111 12334
Q ss_pred hhhHHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEecCCCCCc---cHHHHHHHHHHh--cCeEEEEEeeCCeE
Q 001557 873 GEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIP---PVKELRKLMRIQ--ALRCHVIYCQNGTK 947 (1054)
Q Consensus 873 ~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~~~~~~---~~~el~~~l~~~--~~~~~v~~s~~~~~ 947 (1054)
.+.+..++..+...... ..++. ...+++|++.+.+... ..+++...+... ...+.++ +++ ++
T Consensus 582 ~~~v~~il~~~~~~~~g-------s~ie~----k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~-~g~-~~ 648 (726)
T PRK14501 582 KDAVRPILEEFVDRTPG-------SFIEE----KEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVL-RGN-KV 648 (726)
T ss_pred HHHHHHHHHHHHhcCCC-------cEEEE----cceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEE-ECC-eE
Confidence 34444444433322111 11111 1356777775433111 123455555442 2234433 344 59
Q ss_pred EEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCc---ceEEEecCcc
Q 001557 948 LHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGV---HKTVILKGVG 1004 (1054)
Q Consensus 948 lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~a---g~gVaMgNa~ 1004 (1054)
+||+|+++|||.|+++|++ +++++.+++ +||+.| | ++||+.+ +.+|+|||+.
T Consensus 649 veV~p~~vnKG~al~~ll~--~~~~d~vl~-~GD~~n-D-e~Mf~~~~~~~~~v~vG~~~ 703 (726)
T PRK14501 649 VEVRPAGVNKGRAVRRLLE--AGPYDFVLA-IGDDTT-D-EDMFRALPETAITVKVGPGE 703 (726)
T ss_pred EEEEECCCCHHHHHHHHHh--cCCCCEEEE-ECCCCC-h-HHHHHhcccCceEEEECCCC
Confidence 9999999999999999999 777777777 888888 8 9999986 7999999866
No 6
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=7.5e-47 Score=469.14 Aligned_cols=542 Identities=13% Similarity=0.093 Sum_probs=383.7
Q ss_pred HHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHcc-CCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHH
Q 001557 289 IQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGA-LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRR 367 (1054)
Q Consensus 289 ~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~r 367 (1054)
..++..+.+.+.. -|+|-.|++...+++.++.+. ..+++.|..|..++..-- +. .....+.
T Consensus 135 ~~FA~~i~~~~~~-----~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs~e~-fr------------~lp~r~~ 196 (797)
T PLN03063 135 RMFLDVVKENYEE-----GDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSEI-YK------------TLPSRSE 196 (797)
T ss_pred HHHHHHHHHhcCC-----CCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCCHHH-Hh------------hCCCHHH
Confidence 3445555554322 379999998777787777654 568999999987664411 10 0001111
Q ss_pred HHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHh-HhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCC
Q 001557 368 IEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRAR-IKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDG 446 (1054)
Q Consensus 368 i~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r-~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~ 446 (1054)
| -..+-.||+|-+.|..++..+..... +.|... ...++...|+.. ++.+||+|||++.|.+.....
T Consensus 197 i---l~gll~aDligF~t~~y~r~Fl~~~~-------r~l~~~~~~~~i~~~gr~~-~I~viP~GID~~~f~~~~~~~-- 263 (797)
T PLN03063 197 L---LRAVLTADLIGFHTYDFARHFLSACT-------RILGVEGTHEGVVDQGKVT-RVAVFPIGIDPERFINTCELP-- 263 (797)
T ss_pred H---HHHHhcCCEEEeCCHHHHHHHHHHHH-------HHhCccccCCceEECCeEE-EEEEEecccCHHHHHHHhcCh--
Confidence 1 23578999999999999888765332 111111 123455555555 799999999999887532110
Q ss_pred cccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEEE------ecCCC
Q 001557 447 EVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTLIM------GNRDD 518 (1054)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~--~l~LIi------G~~~~ 518 (1054)
........++..+ .++++|+++||+++.||+..+|+||+.+.+.++.. +++|+. |+++.
T Consensus 264 -----------~~~~~~~~lr~~~--~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~ 330 (797)
T PLN03063 264 -----------EVKQHMKELKRFF--AGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPE 330 (797)
T ss_pred -----------hHHHHHHHHHHhc--CCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHH
Confidence 0011111222222 46889999999999999999999999997666654 355543 23445
Q ss_pred chhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCC----E
Q 001557 519 IDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLP----I 594 (1054)
Q Consensus 519 ~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~P----V 594 (1054)
++.++....+...+|+...+..++.+.+++.++++.+++.++|+.| ||||+||++|||||+++||||||+| +
T Consensus 331 y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~A----DvfvvtSlrEGmnLv~lEamA~g~p~~gvl 406 (797)
T PLN03063 331 YQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAIT----DVMLVTSLRDGMNLVSYEFVACQKAKKGVL 406 (797)
T ss_pred HHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhC----CEEEeCccccccCcchhhHheeecCCCCCE
Confidence 5566665566666666666667788888888899999999999999 9999999999999999999999998 9
Q ss_pred EEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhcCCC
Q 001557 595 VATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVS-DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQRQPR 673 (1054)
Q Consensus 595 Iat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~~~~~~~ 673 (1054)
|+|..+|..+.+ +.+|++|||+|++++|+||.++|+ ++++++++.+.+++++..|+|..|++.|++.|.++...+..
T Consensus 407 VlSe~~G~~~~l--~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~~~~ 484 (797)
T PLN03063 407 VLSEFAGAGQSL--GAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEAEL 484 (797)
T ss_pred EeeCCcCchhhh--cCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhhhhh
Confidence 999888888875 457999999999999999999999 66677777888888899999999999999999877643321
Q ss_pred CCCCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCcchhhhhccchhhhHHHHHHhhccccCCCccC
Q 001557 674 WQRSDDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGGSTLDNSLDTEENAVTGKNKLENAVLALSNRTIGGTQKA 753 (1054)
Q Consensus 674 ~~~~~~~~~~s~~~~~~~~lr~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (1054)
..... +. .-..+.++.+|+++++
T Consensus 485 ~~~~~--------------------~~-------------------------------~l~~~~~~~~y~~a~~------ 507 (797)
T PLN03063 485 RTRNI--------------------PL-------------------------------ELPEQDVIQQYSKSNN------ 507 (797)
T ss_pred cccCC--------------------CC-------------------------------CCCHHHHHHHHHhccC------
Confidence 11000 00 1123457777777444
Q ss_pred ccCccCCCCCcccCCCEEEEEEecCCCC-----------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHH
Q 001557 754 DHNVASGKFPALRRRKYVFVIAADCDTT-----------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLV 822 (1054)
Q Consensus 754 ~~~~~~~~~p~~~~~kkLiv~DiDGTL~-----------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~ 822 (1054)
++|++|+||||. ..+++.+.++|++|.++ ++..|+|.|||+...+..++.
T Consensus 508 ----------------rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d---~~~~V~IvSGR~~~~L~~~~~ 568 (797)
T PLN03063 508 ----------------RLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSD---PKTTVVVLSRSGKDILDKNFG 568 (797)
T ss_pred ----------------eEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcC---CCCEEEEEeCCCHHHHHHHhC
Confidence 999999999992 23778999999999987 788899999999999999998
Q ss_pred hCCCCCCCCcEEEEcCCcEEEcCCCCCCCCCCCccccCccchh----hhccccCh---hhHHHHHHHhhhhccCCCCccC
Q 001557 823 SGGLSPLAFDAFICNSGSELYYPSSSTEDNHGLPFLVDLDYRF----HTEYRWGG---EGLRKTLVRWAASVNDKKGEEG 895 (1054)
Q Consensus 823 ~l~l~~~~~d~lI~~nGa~I~~~~~~~~~~~~~~~~~d~~~~~----~i~~~w~~---e~l~~~~~~~~~~~~~~~~~~~ 895 (1054)
..++ +++++||+++..+++ .|.. .....|.. ..++.+..++|++..+.|
T Consensus 569 ~~~l------~l~aeHG~~~r~~~~--------------~w~~~~~~~~~~~w~~~v~~~l~~~~~rtpGs~iE~K---- 624 (797)
T PLN03063 569 EYNI------WLAAENGMFLRHTSG--------------EWVTTMPEHMNLDWVDGVKNVFKYFTDRTPRSYVEKS---- 624 (797)
T ss_pred CCCC------cEEEeCCEEEecCCC--------------ceeeccccccChhHHHHHHHHHHHHHHhCCCcEEEEc----
Confidence 7666 599999999875431 1211 11223432 346677778888877665
Q ss_pred cccccccccCcceEEEEEecCCCCC---ccHHHHHHHHHHh---cCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHh-
Q 001557 896 KIVEEDESRSTIHCYAFEVTNPQMI---PPVKELRKLMRIQ---ALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRW- 968 (1054)
Q Consensus 896 ~~v~~~~~~~~~~kis~~~~~~~~~---~~~~el~~~l~~~---~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~- 968 (1054)
.+.++||++..+.. ..+.++...+... ...+.+ ..+...+||.|.++|||.|++.|++++
T Consensus 625 -----------~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v--~~Gk~vvEvrp~gvnKG~Av~~ll~~~~ 691 (797)
T PLN03063 625 -----------ETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDV--VRGQKSVEVHAIGVTKGAAIGRILGEIV 691 (797)
T ss_pred -----------CeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEE--EECCeEEEEEcCCCChHHHHHHHHHHhh
Confidence 67788998765322 2344555554221 123444 344459999999999999999999986
Q ss_pred -----CCCccCEEEEeCcC-CCccccccccCcce
Q 001557 969 -----GIDLSNVVVIAGEC-GDTDYEGLLGGVHK 996 (1054)
Q Consensus 969 -----gI~~e~vvaf~GD~-~d~D~~eML~~ag~ 996 (1054)
+-+. +++.++||. ++ | |+||+..+.
T Consensus 692 ~~~~~~~~~-dfvl~~Gdd~~~-D-EdmF~~l~~ 722 (797)
T PLN03063 692 HNKSMTTPI-DFVFCSGYFLEK-D-EDVYTFFEP 722 (797)
T ss_pred hccccCCCC-CEEEEeCCCCCC-c-HHHHHhccc
Confidence 2233 355447775 66 8 999998764
No 7
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=1.1e-44 Score=449.05 Aligned_cols=559 Identities=14% Similarity=0.105 Sum_probs=389.8
Q ss_pred HHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHcc-CCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHH
Q 001557 288 IIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGA-LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMR 366 (1054)
Q Consensus 288 i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ 366 (1054)
...++.++.+.+... =|+|-.|++...+++.++.+. ...++-|..|..++..-- + ....+..
T Consensus 187 N~~FA~~v~~~~~~~----~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~ei-f------------r~LP~r~ 249 (854)
T PLN02205 187 NKIFADRIMEVINPE----DDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEI-Y------------KTLPIRE 249 (854)
T ss_pred HHHHHHHHHHHhCCC----CCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChHH-H------------hhCCcHH
Confidence 344555555543210 179999998777777777654 467899999987664411 1 1111111
Q ss_pred HHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhH-----hcccccCCCCCCcEEEeCCCCcCCCcccCC
Q 001557 367 RIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI-----KRGVSCHGRFMPRMVVIPPGIEFHHIVRHN 441 (1054)
Q Consensus 367 ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~-----~~gv~~~g~~~~rv~vIPnGID~~~f~~~~ 441 (1054)
.| -..+-.||+|-+.|..++..+..... |.|+.+. ..|+...|+.. ++.++|.|||+..|....
T Consensus 250 ei---L~glL~aDlIGFht~~yar~Fl~~~~-------r~lgl~~~~~~g~~~~~~~Gr~v-~v~~~PigId~~~~~~~~ 318 (854)
T PLN02205 250 EL---LRALLNSDLIGFHTFDYARHFLSCCS-------RMLGLSYESKRGYIGLEYYGRTV-SIKILPVGIHMGQLQSVL 318 (854)
T ss_pred HH---HHHHhcCCeEEecCHHHHHHHHHHHH-------HHhCCcccCCCcceeEEECCcEE-EEEEEeCeEcHHHHHHHh
Confidence 11 23577999999999999887765322 2222221 13556667776 799999999999886422
Q ss_pred CCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEEE------
Q 001557 442 GDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTLIM------ 513 (1054)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~--~l~LIi------ 513 (1054)
.. .......++++..+..+++++|+.++|+|+.|||...+.||++|++.+|.. +++||.
T Consensus 319 ~~-------------~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr 385 (854)
T PLN02205 319 SL-------------PETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPAR 385 (854)
T ss_pred cC-------------hhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC
Confidence 11 011223344444443357899999999999999999999999998777765 455532
Q ss_pred ecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHc---
Q 001557 514 GNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAY--- 590 (1054)
Q Consensus 514 G~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~--- 590 (1054)
+.+++|++++.+..+.+++||+..++.++.+.+++...++++++.++|+.| ||+|++|++|||||+.+||+||
T Consensus 386 ~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~A----Dv~lVT~lRDGMNLva~Eyia~~~~ 461 (854)
T PLN02205 386 GKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVA----ECCLVTAVRDGMNLIPYEYIISRQG 461 (854)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhc----cEEEeccccccccccchheeEEccC
Confidence 456788899999999999999999999999999999999999999999999 9999999999999999999987
Q ss_pred -----------------CCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHH-HHHHHHHHHHhcCC
Q 001557 591 -----------------GLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWE-RCRQNGLKNIHQFS 652 (1054)
Q Consensus 591 -----------------G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~-~~~~~~~~~v~~fs 652 (1054)
|+.|++..+|+..++ ..+++|||+|++++|+||.++|+++...+ ...+..++++..++
T Consensus 462 ~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L----~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d 537 (854)
T PLN02205 462 NEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL----SGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHD 537 (854)
T ss_pred ccccccccccccccCCCCceEeeeccchhHHh----CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCC
Confidence 678889999998888 46899999999999999999999766544 44455556669999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCccccccccccccc-cccCCCCCCCCCCCCCcchhhhhccc
Q 001557 653 WPEHCKSYLSRISSCKQRQPRWQRSDDGLDNSESDSPGDSWRDIHDLSLNLKL-SLEGDKNEGGSTLDNSLDTEENAVTG 731 (1054)
Q Consensus 653 w~~~a~~yl~~l~~~~~~~~~~~~~~~~~~~s~~~~~~~~lr~~~~~~~~~~~-~~d~~~~~~~~~~~~~~~~~~~~~~~ 731 (1054)
...|++.|+..+......+........+ +.+++++ .+|-. . .
T Consensus 538 ~~~W~~~fl~~l~~~~~~~~~~~~~~~g------------------~g~~~~~~~~~~~---~----------------~ 580 (854)
T PLN02205 538 VGYWARSFLQDLERTCRDHSRRRCWGIG------------------FGLSFRVVALDPN---F----------------R 580 (854)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccc------------------ccccccccccccc---c----------------c
Confidence 9999999999998764322111000000 0000000 00000 0 1
Q ss_pred hhhhHHHHHHhhccccCCCccCccCccCCCCCcccCCCEEEEEEecCCCC------hhhHHHHHHHHHHHhccCCCCceE
Q 001557 732 KNKLENAVLALSNRTIGGTQKADHNVASGKFPALRRRKYVFVIAADCDTT------SDFLEIIKKVVEAAGKDNSAGFIG 805 (1054)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~kkLiv~DiDGTL~------~~i~~~~~~al~~l~~~~~~~gi~ 805 (1054)
.-..+.++.+|++++. ++|++|+||||. ..+++.++++|++|.+. +++.
T Consensus 581 ~l~~~~i~~~y~~~~~----------------------rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d---~g~~ 635 (854)
T PLN02205 581 KLSMEHIVSAYKRTTT----------------------RAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRD---KNNM 635 (854)
T ss_pred ccCHHHHHHHHHhhcC----------------------eEEEEecCCcccCCccccCCCCHHHHHHHHHHHhc---CCCE
Confidence 2334667888877444 999999999992 35788999999998665 6899
Q ss_pred EEEEcCCCHHHHHHHHHhCC-CCCCCCcEEEEcCCcEEEcCCCCCCCCCCCccccCccchh---hhccccCh---hhHHH
Q 001557 806 FVLSTALTILELHSLLVSGG-LSPLAFDAFICNSGSELYYPSSSTEDNHGLPFLVDLDYRF---HTEYRWGG---EGLRK 878 (1054)
Q Consensus 806 fvIaTGR~~~~i~~~l~~l~-l~~~~~d~lI~~nGa~I~~~~~~~~~~~~~~~~~d~~~~~---~i~~~w~~---e~l~~ 878 (1054)
|+|+|||++..+.+++..+. + ++||+||+++..++. ..|.. .....|.. ..+..
T Consensus 636 VaIvSGR~~~~L~~~f~~~~~l------~laaEHG~~ir~~~~-------------~~w~~~~~~~~~~w~~~v~~i~~~ 696 (854)
T PLN02205 636 VFIVSARSRKTLADWFSPCEKL------GIAAEHGYFLRLKRD-------------VEWETCVPVADCSWKQIAEPVMQL 696 (854)
T ss_pred EEEEeCCCHHHHHHHhCCCCCe------EEEEeCCEEEEeCCC-------------ceeeecchhhhHHHHHHHHHHHHH
Confidence 99999999999999997753 4 699999999987642 11210 01112321 12233
Q ss_pred HHHHhhhhccCCCCccCcccccccccCcceEEEEEecCCCCCc---cHHHHHHHHHHhcCe-EEEEEeeCCeEEEEecCC
Q 001557 879 TLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIP---PVKELRKLMRIQALR-CHVIYCQNGTKLHVIPVL 954 (1054)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~~~~~~---~~~el~~~l~~~~~~-~~v~~s~~~~~lEV~p~~ 954 (1054)
+..+.+++..+.+ ...+++++++.+... ..+++...+...... ...+.++. ..+||.|++
T Consensus 697 y~ertpGs~IE~K---------------~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~-~vvEV~p~g 760 (854)
T PLN02205 697 YTETTDGSTIEDK---------------ETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQ-NIVEVKPQG 760 (854)
T ss_pred HhcCCCchhheec---------------ceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECC-cEEEEEeCC
Confidence 3444455554433 567778876543111 123455544432111 12244444 499999999
Q ss_pred CCHHHHHHHHHH---HhCCCccCEEEEeCcCCCccccccccCcc
Q 001557 955 ASRSQALRYLHV---RWGIDLSNVVVIAGECGDTDYEGLLGGVH 995 (1054)
Q Consensus 955 asKg~AL~~L~~---~~gI~~e~vvaf~GD~~d~D~~eML~~ag 995 (1054)
+|||.|++.|++ ++|++++.+++ +||+.| | ++||+.++
T Consensus 761 vnKG~Al~~Ll~~~~~~g~~~d~vl~-~GDD~n-D-edMF~~~~ 801 (854)
T PLN02205 761 VSKGLVAKRLLSIMQERGMLPDFVLC-IGDDRS-D-EDMFEVIT 801 (854)
T ss_pred CCHHHHHHHHHHHHHhcCCCcccEEE-EcCCcc-H-HHHHHHhh
Confidence 999999999985 46999988888 777777 7 99999876
No 8
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=3.5e-44 Score=441.00 Aligned_cols=547 Identities=13% Similarity=0.112 Sum_probs=390.8
Q ss_pred HHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHcc-CCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHH
Q 001557 289 IQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGA-LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRR 367 (1054)
Q Consensus 289 ~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~r 367 (1054)
..++..+.+.+.. =|+|-+|++...+++.++.+. ...++-|..|..++..- .+ ......+.
T Consensus 219 ~~FA~~i~~~~~~-----gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~E-if------------r~LP~r~e 280 (934)
T PLN03064 219 QMFADVVNEHYEE-----GDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSE-IH------------RTLPSRSE 280 (934)
T ss_pred HHHHHHHHHhcCC-----CCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCCChH-HH------------hhCCcHHH
Confidence 3445555554322 379999998777888887654 46788999998766441 11 01111111
Q ss_pred HHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHh-HhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCC
Q 001557 368 IEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRAR-IKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDG 446 (1054)
Q Consensus 368 i~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r-~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~ 446 (1054)
| -..+-.||+|-+.|..++..+..... +.|... ...||...|+.. ++.++|.|||++.|.......
T Consensus 281 l---L~glL~aDlIGFqT~~y~rhFl~~c~-------rlLg~~~~~~~v~~~Gr~v-~V~~~PiGID~~~f~~~~~~~-- 347 (934)
T PLN03064 281 L---LRSVLAADLVGFHTYDYARHFVSACT-------RILGLEGTPEGVEDQGRLT-RVAAFPIGIDSDRFIRALETP-- 347 (934)
T ss_pred H---HHHHhcCCeEEeCCHHHHHHHHHHHH-------HHhCccccCCeEEECCEEE-EEEEEeCEEcHHHHHHHhcCh--
Confidence 1 23577999999999999887765332 122111 123566677665 789999999999998432110
Q ss_pred cccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEEE------ecCCC
Q 001557 447 EVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTLIM------GNRDD 518 (1054)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~--~l~LIi------G~~~~ 518 (1054)
.......+++..+ .++++|++++|+|+.|||...|+||+.|++.+|.+ +++||. ++++.
T Consensus 348 -----------~v~~~~~~lr~~~--~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~e 414 (934)
T PLN03064 348 -----------QVQQHIKELKERF--AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPE 414 (934)
T ss_pred -----------hHHHHHHHHHHHh--CCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHH
Confidence 1112223333333 46789999999999999999999999997767765 354431 55667
Q ss_pred chhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHc-----CCC
Q 001557 519 IDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAY-----GLP 593 (1054)
Q Consensus 519 ~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~-----G~P 593 (1054)
|+.++.+..+.+++|+..++..++.+.+++...++++++.++|+.| ||||+||++|||||+.+||||| |++
T Consensus 415 Y~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~A----DV~lvTslrDGmNLva~Eyva~~~~~~GvL 490 (934)
T PLN03064 415 YQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDSKKGVL 490 (934)
T ss_pred HHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhC----CEEEeCccccccCchHHHHHHhhcCCCCCe
Confidence 8888888999999999999999999999999999999999999999 9999999999999999999999 788
Q ss_pred EEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhcCC
Q 001557 594 IVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVS-DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQRQP 672 (1054)
Q Consensus 594 VIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~~~~~~ 672 (1054)
|++..+|+...+ +.++++|||+|++++|++|.++|+ ++++++++.+.+++.+..|||..|++.|++.+..+...+.
T Consensus 491 ILSEfaGaa~~L---~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~~~~~ 567 (934)
T PLN03064 491 ILSEFAGAAQSL---GAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTVVEAQ 567 (934)
T ss_pred EEeCCCchHHHh---CCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHhhhh
Confidence 886667766665 347999999999999999999999 6777788888888999999999999999999987643221
Q ss_pred CCCCCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCcchhhhhccchhhhHHHHHHhhccccCCCcc
Q 001557 673 RWQRSDDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGGSTLDNSLDTEENAVTGKNKLENAVLALSNRTIGGTQK 752 (1054)
Q Consensus 673 ~~~~~~~~~~~s~~~~~~~~lr~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (1054)
...... . +.-..+.++.+|+++++
T Consensus 568 ~~~~~~---------------------~------------------------------~~l~~~~~~~~y~~a~~----- 591 (934)
T PLN03064 568 LRTRQV---------------------P------------------------------PQLPPEDAIQRYLQSNN----- 591 (934)
T ss_pred cccccc---------------------C------------------------------CCCCHHHHHHHHHhccc-----
Confidence 100000 0 01123557777776444
Q ss_pred CccCccCCCCCcccCCCEEEEEEecCCCC-----h------------hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHH
Q 001557 753 ADHNVASGKFPALRRRKYVFVIAADCDTT-----S------------DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTIL 815 (1054)
Q Consensus 753 ~~~~~~~~~~p~~~~~kkLiv~DiDGTL~-----~------------~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~ 815 (1054)
++|++|+||||. . .+++.++++|++|.+. ++..|+|.|||+..
T Consensus 592 -----------------RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~d---p~n~VaIVSGR~~~ 651 (934)
T PLN03064 592 -----------------RLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSD---PKTTIVVLSGSDRS 651 (934)
T ss_pred -----------------eEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhC---CCCeEEEEeCCCHH
Confidence 999999999992 1 2568899999999987 78899999999999
Q ss_pred HHHHHHHhCCCCCCCCcEEEEcCCcEEEcCCCCCCCCCC--CccccCccchhhhccccChhhHHHHHHHhhhhccCCCCc
Q 001557 816 ELHSLLVSGGLSPLAFDAFICNSGSELYYPSSSTEDNHG--LPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGE 893 (1054)
Q Consensus 816 ~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~~~~~~~~~~--~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~ 893 (1054)
.+..++..+++ +++++||+++..+++ .|. .....+..|...+ ...++.+..++|++.++.|
T Consensus 652 ~Le~~fg~~~L------~LaAEHG~~~R~~~~----~w~~~~~~~~~~~W~~~v-----~~ile~~~eRtPGS~IE~K-- 714 (934)
T PLN03064 652 VLDENFGEFDM------WLAAENGMFLRHTKG----EWMTTMPEHLNMDWVDSV-----KHVFEYFTERTPRSHFETR-- 714 (934)
T ss_pred HHHHHhCCCCc------eEEeeCCeEEecCCC----cceeccccccchHHHHHH-----HHHHHHHHhcCCCcEEEEc--
Confidence 99999988876 599999999976531 010 0000112232221 2345677778888877665
Q ss_pred cCcccccccccCcceEEEEEecCCCCC---ccHHHHHHHHHHh---cCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHH
Q 001557 894 EGKIVEEDESRSTIHCYAFEVTNPQMI---PPVKELRKLMRIQ---ALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVR 967 (1054)
Q Consensus 894 ~~~~v~~~~~~~~~~kis~~~~~~~~~---~~~~el~~~l~~~---~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~ 967 (1054)
.+.++||++..+.. ..+.++.+.+... ...+.+ ..+...+||.|.++|||.|++.|+.+
T Consensus 715 -------------~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V--~~Gk~VVEVrP~gvnKG~Av~~ll~~ 779 (934)
T PLN03064 715 -------------ETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDV--VQGSRSVEVRPVGVTKGAAIDRILGE 779 (934)
T ss_pred -------------CcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEE--EeCCeEEEEEcCCCCHHHHHHHHHHh
Confidence 67788888765311 1244555555221 223444 34445999999999999999999997
Q ss_pred hC----C-CccCEEEEeCcCCCccccccccCcc
Q 001557 968 WG----I-DLSNVVVIAGECGDTDYEGLLGGVH 995 (1054)
Q Consensus 968 ~g----I-~~e~vvaf~GD~~d~D~~eML~~ag 995 (1054)
+. . ..-++|.++||+-.|| ++||+...
T Consensus 780 ~~~~~~~~~~~DFvlc~GDd~~~D-EdmF~~l~ 811 (934)
T PLN03064 780 IVHSKSMTTPIDYVLCIGHFLGKD-EDIYTFFE 811 (934)
T ss_pred hhhccccCCCCCEEEEeCCCCCCc-HHHHHHHh
Confidence 62 1 1224566588865447 99999764
No 9
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=8.9e-41 Score=404.81 Aligned_cols=518 Identities=18% Similarity=0.186 Sum_probs=339.0
Q ss_pred hhhhhHHHHH--hhhh-----hhhhchHHHHHHHHHHHHHhhccchhhhhhhhccCCCCCCCCCCccccCCCCCCCCCCC
Q 001557 75 LENMCWRIWN--LARK-----KKQIEGEEAQRKAKRRLERERGRKEASADMSEDLSEGDKGDVSGELSAHGGSTRGRMPR 147 (1054)
Q Consensus 75 ~~~~~~~~~~--~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (1054)
-..|-|.+|- |-|= .+-|--+||.-+-+--|.|+..-.++--+... ..+ .++
T Consensus 408 ~~~~~~~~~~~lll~id~~~~~~~~~~~~a~~lr~~~~~~~~~~~~~~~~~~~----~~~----~~~------------- 466 (977)
T PLN02939 408 ADDMPSEFWSRILLLIDGWLLEKKISNNDAKLLREMVWKRDGRIREAYLSCKG----KNE----REA------------- 466 (977)
T ss_pred hhhCCHHHHHHHHHHHHHHHHhccCChhhHHHHHHHHHhhhhhHHHHHHHHhc----Cch----HHH-------------
Confidence 4579999994 2221 22277778887777777777776666655422 000 111
Q ss_pred CCchhhhhhhhhhccCcceEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCC
Q 001557 148 ISSVDTMENWAIQYKEKKLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDW 227 (1054)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~ 227 (1054)
.+ ....+....+.++|||++||.... |+ ..+||...++..|+++|+++ | |+|.|+++.+..-....
T Consensus 467 -~~--~~~~~~~~~~~~~mkILfVasE~a----P~-----aKtGGLaDVv~sLPkAL~~~-G-hdV~VIlP~Y~~i~~~~ 532 (977)
T PLN02939 467 -VE--NFLKLTLSGTSSGLHIVHIAAEMA----PV-----AKVGGLADVVSGLGKALQKK-G-HLVEIVLPKYDCMQYDQ 532 (977)
T ss_pred -HH--HHHHhccCCCCCCCEEEEEEcccc----cc-----cccccHHHHHHHHHHHHHHc-C-CeEEEEeCCCcccChhh
Confidence 11 444555656678899999998765 33 78999999999999999999 8 99999998764322111
Q ss_pred ccCCcc-c-cc--cc-ccccccccccCCCCCeEEEEccCC-CCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcC
Q 001557 228 TYAEPS-E-ML--NR-KNTENLMQGLGESSGAYIIRIPFG-PKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGS 301 (1054)
Q Consensus 228 ~~~~~~-~-~l--~~-~~~~~~~~~~~~~~g~~i~rip~g-~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~ 301 (1054)
..+... + .+ +. +......-.....+|+.++.|... |. .|..+..++.+- |.+.++.. +.++..+.+..
T Consensus 533 ~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~~-~fF~R~~iYg~~----Dn~~RF~~-FsrAaLe~~~~ 606 (977)
T PLN02939 533 IRNLKVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPS-KFFWRAQYYGEH----DDFKRFSY-FSRAALELLYQ 606 (977)
T ss_pred hhcccccceEEEEeecCceeEEEEEEEEECCeeEEEEecCCch-hccCCCCCCCCc----cHHHHHHH-HHHHHHHHHHh
Confidence 000000 0 00 00 000000001122357888877632 21 244444555442 33333332 23333333322
Q ss_pred CCCCcceEEEEcCCCchHHHHHHHc------cCCCCEEEEeCCCccchHH---HHHHhCCCChhhhhhHh----HHHHHH
Q 001557 302 GQPIWPVAIHGHYADAGDAAALLSG------ALNVPMVFTGHSLGRDKLE---QLLKQGRLSRDEINTTY----KIMRRI 368 (1054)
Q Consensus 302 ~~~~~pDVIh~h~~~a~~~a~~l~~------~~~iP~V~t~H~l~~~~~~---~l~~~g~~~~~~i~~~~----~~~~ri 368 (1054)
. ..+|||||||+|.+++++.++.. ..++|+|+|+|++.++... .+-..| +....+...- .+..++
T Consensus 607 ~-~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lG-L~~~~l~~~d~le~~~~~~i 684 (977)
T PLN02939 607 S-GKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCG-LDVHQLDRPDRMQDNAHGRI 684 (977)
T ss_pred c-CCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcC-CCHHHccChhhhhhccCCch
Confidence 1 25799999999999987443322 2468999999999665421 111111 1111110000 011223
Q ss_pred HHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCC-C--
Q 001557 369 EAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDV-D-- 445 (1054)
Q Consensus 369 ~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~-~-- 445 (1054)
..-+..+..||.|+|+|+.+++++...+.. +++.. ++.+..++.+||||||++.|.|..... +
T Consensus 685 N~LK~GIv~AD~VtTVSptYA~EI~te~G~---GL~~~-----------L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~ 750 (977)
T PLN02939 685 NVVKGAIVYSNIVTTVSPTYAQEVRSEGGR---GLQDT-----------LKFHSKKFVGILNGIDTDTWNPSTDRFLKVQ 750 (977)
T ss_pred HHHHHHHHhCCeeEeeeHHHHHHHHHHhcc---chHHH-----------hccccCCceEEecceehhhcCCccccccccc
Confidence 333456778999999999999887652221 12222 233345899999999999999764211 0
Q ss_pred CcccccCCCCCCCCCchhHHHhhhcCC---CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhh
Q 001557 446 GEVERDEGSPASPDPPIWSEIMHFFSN---PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEM 522 (1054)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~ 522 (1054)
.....+. . ......+.+.+++.+ ++.|+|++|||+.+.||++.+++|+..+.. ....+ +|+|+|++.
T Consensus 751 Ys~~dl~--G--K~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dvqL-VIvGdGp~~--- 820 (977)
T PLN02939 751 YNANDLQ--G--KAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGGQF-VLLGSSPVP--- 820 (977)
T ss_pred cChhhhh--h--hhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCCEE-EEEeCCCcH---
Confidence 0000000 0 001112233445544 357999999999999999999999988753 22333 477988641
Q ss_pred hhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCc
Q 001557 523 SGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGP 602 (1054)
Q Consensus 523 ~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~ 602 (1054)
.+...+..++.+++..++|.|+|.++......+|+.| |+||+||.+||||++++|||+||+|+|++++||.
T Consensus 821 -----~~e~eL~~La~~l~l~drV~FlG~~de~lah~IYAaA----DIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL 891 (977)
T PLN02939 821 -----HIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAAS----DMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGL 891 (977)
T ss_pred -----HHHHHHHHHHHHcCCCCeEEEEeccCHHHHHHHHHhC----CEEEECCCccCCcHHHHHHHHCCCCEEEecCCCC
Confidence 2356678889999988899999998766678999999 9999999999999999999999999999999999
Q ss_pred ccceee---------CCceEEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhh
Q 001557 603 VDIHRV---------LDNGLLVDPHDQQSIADALLKLVS----DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQ 669 (1054)
Q Consensus 603 ~eiv~~---------~~~Gllv~p~d~~~la~aI~~ll~----d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~~~ 669 (1054)
.|+|.+ +.+|++|+|.|+++|+++|.+++. +++.|++++++++. +.|||+..+++|.++|..+..
T Consensus 892 ~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am~--~dFSWe~~A~qYeeLY~~ll~ 969 (977)
T PLN02939 892 NDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDMN--IDFSWDSSASQYEELYQRAVA 969 (977)
T ss_pred cceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH--hcCCHHHHHHHHHHHHHHHHH
Confidence 999865 468999999999999999999875 79999999887653 689999999999999998875
Q ss_pred c
Q 001557 670 R 670 (1054)
Q Consensus 670 ~ 670 (1054)
+
T Consensus 970 ~ 970 (977)
T PLN02939 970 R 970 (977)
T ss_pred h
Confidence 4
No 10
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=1.5e-39 Score=387.87 Aligned_cols=444 Identities=20% Similarity=0.226 Sum_probs=286.6
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccc
Q 001557 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 245 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~ 245 (1054)
|||++||.+.++ . ..+||+..+|..|+++|+++ | |+|+|+|+.+..-. ....... .+.....-...
T Consensus 1 m~i~~vs~e~~P----~-----~k~GGl~~~v~~L~~~L~~~-G-~~V~v~~p~y~~~~--~~~~~~~-~~~~~~~~~~~ 66 (466)
T PRK00654 1 MKILFVASECAP----L-----IKTGGLGDVVGALPKALAAL-G-HDVRVLLPGYPAIR--EKLRDAQ-VVGRLDLFTVL 66 (466)
T ss_pred CeEEEEEccccc----C-----cccCcHHHHHHHHHHHHHHC-C-CcEEEEecCCcchh--hhhcCce-EEEEeeeEEEE
Confidence 899999998762 1 56899999999999999999 8 99999998643210 0000000 00000000000
Q ss_pred cccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHH
Q 001557 246 QGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLS 325 (1054)
Q Consensus 246 ~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~ 325 (1054)
......+|+++++++.. .+..+..++++.... .++.. +.+...+.+... ..+|||||+|+|.++.++.+++
T Consensus 67 ~~~~~~~gv~v~~v~~~---~~~~~~~~y~~~d~~----~r~~~-f~~~~~~~~~~~-~~~pDiiH~h~w~~~~~~~~l~ 137 (466)
T PRK00654 67 FGHLEGDGVPVYLIDAP---HLFDRPSGYGYPDNG----ERFAF-FSWAAAEFAEGL-DPRPDIVHAHDWHTGLIPALLK 137 (466)
T ss_pred EEeEEcCCceEEEEeCH---HHcCCCCCCCCcChH----HHHHH-HHHHHHHHHHhc-CCCCceEEECCcHHHHHHHHHH
Confidence 00012468999988763 344455555544332 11110 111111111111 1469999999999999998887
Q ss_pred cc-----CCCCEEEEeCCCccchH---HHHHHhCCCChhhhh-hHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhh
Q 001557 326 GA-----LNVPMVFTGHSLGRDKL---EQLLKQGRLSRDEIN-TTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLY 396 (1054)
Q Consensus 326 ~~-----~~iP~V~t~H~l~~~~~---~~l~~~g~~~~~~i~-~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y 396 (1054)
.. .++|+|+|.|++..+.. ..+-..| +...... ....+...+...+.++..||.|+|+|+.+.+++...+
T Consensus 138 ~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~~ 216 (466)
T PRK00654 138 EKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELG-LPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITTPE 216 (466)
T ss_pred HhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcC-CChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhcccc
Confidence 55 37999999999864321 1110011 0110000 0000001122345678999999999998887765432
Q ss_pred cCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCC-CchhHHHhhhcCC-CC
Q 001557 397 DGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPD-PPIWSEIMHFFSN-PR 474 (1054)
Q Consensus 397 ~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~ 474 (1054)
.++ ++...+ +....++.+||||||.+.|.|..... ....+........ ......+.++..+ ++
T Consensus 217 ~~~--gl~~~~-----------~~~~~ki~vI~NGid~~~~~p~~~~~--~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~ 281 (466)
T PRK00654 217 FGY--GLEGLL-----------RARSGKLSGILNGIDYDIWNPETDPL--LAANYSADDLEGKAENKRALQERFGLPDDD 281 (466)
T ss_pred CCc--ChHHHH-----------HhcccCceEecCCCCccccCCccCcc--cccccChhhhhchHHHHHHHHHHhCCCCCC
Confidence 111 111111 11223899999999999998753211 0000000000000 0011223344443 36
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEE-eCCCCC
Q 001557 475 KPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVA-YPKHHK 553 (1054)
Q Consensus 475 ~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~-~~g~~~ 553 (1054)
.++|+++||+.+.||++.+++|+.++.+ +..++ +|+|+++. .+...+.+++.+++. ++. +.++ +
T Consensus 282 ~~~i~~vGRl~~~KG~~~li~a~~~l~~--~~~~l-vivG~g~~---------~~~~~l~~l~~~~~~--~v~~~~g~-~ 346 (466)
T PRK00654 282 APLFAMVSRLTEQKGLDLVLEALPELLE--QGGQL-VLLGTGDP---------ELEEAFRALAARYPG--KVGVQIGY-D 346 (466)
T ss_pred CcEEEEeeccccccChHHHHHHHHHHHh--cCCEE-EEEecCcH---------HHHHHHHHHHHHCCC--cEEEEEeC-C
Confidence 7899999999999999999999999853 23333 46687652 234567778888763 454 4554 4
Q ss_pred CCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeC------CceEEeCCCCHHHHHHHH
Q 001557 554 QSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVL------DNGLLVDPHDQQSIADAL 627 (1054)
Q Consensus 554 ~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~------~~Gllv~p~d~~~la~aI 627 (1054)
.+.++.+|+.| |++|+||.+||||++++|||+||+|+|+++.||+.|+|.++ .+|++|+|.|+++++++|
T Consensus 347 ~~~~~~~~~~a----Dv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i 422 (466)
T PRK00654 347 EALAHRIYAGA----DMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRAL 422 (466)
T ss_pred HHHHHHHHhhC----CEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHH
Confidence 45567899999 99999999999999999999999999999999999999887 899999999999999999
Q ss_pred HHHHh---CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhh
Q 001557 628 LKLVS---DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQ 669 (1054)
Q Consensus 628 ~~ll~---d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~~~ 669 (1054)
.+++. +++.+.++++++++ +.|||+..+++|+++|+++..
T Consensus 423 ~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 423 RRALELYRQPPLWRALQRQAMA--QDFSWDKSAEEYLELYRRLLG 465 (466)
T ss_pred HHHHHHhcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHHHHHhh
Confidence 99887 77778888877754 689999999999999998753
No 11
>PLN02316 synthase/transferase
Probab=100.00 E-value=6.6e-39 Score=396.08 Aligned_cols=424 Identities=17% Similarity=0.150 Sum_probs=285.6
Q ss_pred cCcceEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcc-ccccccc
Q 001557 162 KEKKLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPS-EMLNRKN 240 (1054)
Q Consensus 162 ~~~~mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~-~~l~~~~ 240 (1054)
++.+|+||+||.+.. |+ ..+||+..+|..|+++|+++ | |+|+|+++.+............. ..+..+.
T Consensus 584 ~~~pM~Il~VSsE~~----P~-----aKvGGLgDVV~sLp~ALa~~-G-h~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~ 652 (1036)
T PLN02316 584 KEPPMHIVHIAVEMA----PI-----AKVGGLGDVVTSLSRAVQDL-N-HNVDIILPKYDCLNLSHVKDLHYQRSYSWGG 652 (1036)
T ss_pred CCCCcEEEEEEcccC----CC-----CCcCcHHHHHHHHHHHHHHc-C-CEEEEEecCCcccchhhcccceEEEEeccCC
Confidence 345799999999876 33 57899999999999999999 8 99999998764321100000000 0000000
Q ss_pred ccccccccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHH
Q 001557 241 TENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDA 320 (1054)
Q Consensus 241 ~~~~~~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~ 320 (1054)
. .+.-.....+|+.++++.... .+.....++.+. +.+.++.. +.++..+.+... ..+|||||||+|.++++
T Consensus 653 ~-~~~v~~~~~~GV~vyfl~~~~--~~F~r~~~Yg~~----Dd~~RF~~-F~~Aale~l~~~-~~~PDIIHaHDW~talv 723 (1036)
T PLN02316 653 T-EIKVWFGKVEGLSVYFLEPQN--GMFWAGCVYGCR----NDGERFGF-FCHAALEFLLQS-GFHPDIIHCHDWSSAPV 723 (1036)
T ss_pred E-EEEEEEEEECCcEEEEEeccc--cccCCCCCCCch----hHHHHHHH-HHHHHHHHHHhc-CCCCCEEEECCChHHHH
Confidence 0 000001223578888776421 122233333332 22222221 222222222111 25799999999999999
Q ss_pred HHHHHcc------CCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHh
Q 001557 321 AALLSGA------LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWR 394 (1054)
Q Consensus 321 a~~l~~~------~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~ 394 (1054)
+++++.. .++|+|+|+|++.... +.+ +.++..||.|+|+|+.+++++..
T Consensus 724 a~llk~~~~~~~~~~~p~V~TiHnl~~~~-------------------n~l------k~~l~~AD~ViTVS~tya~EI~~ 778 (1036)
T PLN02316 724 AWLFKDHYAHYGLSKARVVFTIHNLEFGA-------------------NHI------GKAMAYADKATTVSPTYSREVSG 778 (1036)
T ss_pred HHHHHHhhhhhccCCCCEEEEeCCcccch-------------------hHH------HHHHHHCCEEEeCCHHHHHHHHh
Confidence 8887653 4689999999874311 011 13578999999999998887654
Q ss_pred hhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCC-CCc--ccccCCCCCCCCCchhHHHhhhcC
Q 001557 395 LYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDV-DGE--VERDEGSPASPDPPIWSEIMHFFS 471 (1054)
Q Consensus 395 ~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 471 (1054)
.+. +. ....++.+||||||++.|.|..... +.. ..... . .........+.++..
T Consensus 779 ~~~-l~-------------------~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~-~--gK~~~k~~Lr~~lGL 835 (1036)
T PLN02316 779 NSA-IA-------------------PHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVV-E--GKRAAKEALQQRLGL 835 (1036)
T ss_pred ccC-cc-------------------cccCCEEEEECCccccccCCcccccccccCCchhhh-h--hhhhhHHHHHHHhCC
Confidence 321 00 0113899999999999998753211 000 00000 0 000001122344544
Q ss_pred C-CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCC--CCCEEe
Q 001557 472 N-PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDL--YGQVAY 548 (1054)
Q Consensus 472 ~-~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l--~~~V~~ 548 (1054)
+ ++.|+|++||||.+.||++.|++|+..+.+ ....+ +|+|+|++. .+...+..++.++++ .++|.|
T Consensus 836 ~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~--~~~ql-VIvG~Gpd~--------~~e~~l~~La~~Lg~~~~~rV~f 904 (1036)
T PLN02316 836 KQADLPLVGIITRLTHQKGIHLIKHAIWRTLE--RNGQV-VLLGSAPDP--------RIQNDFVNLANQLHSSHHDRARL 904 (1036)
T ss_pred CcccCeEEEEEeccccccCHHHHHHHHHHHhh--cCcEE-EEEeCCCCH--------HHHHHHHHHHHHhCccCCCeEEE
Confidence 4 367999999999999999999999998853 33344 467888652 235678888888865 468888
Q ss_pred CCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeC-------------CceEEe
Q 001557 549 PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVL-------------DNGLLV 615 (1054)
Q Consensus 549 ~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~-------------~~Gllv 615 (1054)
.+..+......+|+.| |+||+||++||||++++|||+||+|+|++++||++|+|.++ .+|++|
T Consensus 905 ~g~~de~lah~iyaaA----DiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf 980 (1036)
T PLN02316 905 CLTYDEPLSHLIYAGA----DFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSF 980 (1036)
T ss_pred EecCCHHHHHHHHHhC----cEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEe
Confidence 8775433334799999 99999999999999999999999999999999999999874 589999
Q ss_pred CCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHhh
Q 001557 616 DPHDQQSIADALLKLVSD-KQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISSCK 668 (1054)
Q Consensus 616 ~p~d~~~la~aI~~ll~d-~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~~~~ 668 (1054)
++.|+++|+.+|.+++.+ ++....++..+++.+ +.|||+..|++|+++|+.++
T Consensus 981 ~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 981 DGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred CCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 999999999999999986 344555677777777 68999999999999998764
No 12
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=1e-38 Score=374.49 Aligned_cols=402 Identities=25% Similarity=0.360 Sum_probs=291.9
Q ss_pred EEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccc
Q 001557 168 IVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQG 247 (1054)
Q Consensus 168 Illis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~ 247 (1054)
|++++.|.. |...+-..+.||.+.++.+|+++|+++ | |+|+|+|+....+. + +.
T Consensus 1 ~~~~~~~~~----~~~~~~~~~~GG~e~~v~~la~~L~~~-G-~~V~v~~~~~~~~~-----~-~~-------------- 54 (405)
T TIGR03449 1 VAMISMHTS----PLQQPGTGDAGGMNVYILETATELARR-G-IEVDIFTRATRPSQ-----P-PV-------------- 54 (405)
T ss_pred CeEEeccCC----ccccCCCcCCCCceehHHHHHHHHhhC-C-CEEEEEecccCCCC-----C-Cc--------------
Confidence 577888876 333332345699999999999999999 8 99999997521110 0 00
Q ss_pred cCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHcc
Q 001557 248 LGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGA 327 (1054)
Q Consensus 248 ~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~ 327 (1054)
....+|+.+++++.++.. ...... +. ..+..+...+.+.+.. . ...+||+||+|++..+.+++.+++.
T Consensus 55 ~~~~~~~~v~~~~~~~~~-~~~~~~----~~---~~~~~~~~~~~~~~~~---~-~~~~~Diih~h~~~~~~~~~~~~~~ 122 (405)
T TIGR03449 55 VEVAPGVRVRNVVAGPYE-GLDKED----LP---TQLCAFTGGVLRAEAR---H-EPGYYDLIHSHYWLSGQVGWLLRDR 122 (405)
T ss_pred cccCCCcEEEEecCCCcc-cCCHHH----HH---HHHHHHHHHHHHHHhh---c-cCCCCCeEEechHHHHHHHHHHHHh
Confidence 112358999998775542 111110 11 1111111111111111 1 1246999999998778888888888
Q ss_pred CCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHH
Q 001557 328 LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKL 407 (1054)
Q Consensus 328 ~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l 407 (1054)
.++|+|+|.|+++..+...+..... ......+ ..|...++.+|.|+++|+...+.+...|..
T Consensus 123 ~~~p~v~t~h~~~~~~~~~~~~~~~-------~~~~~~~--~~e~~~~~~~d~vi~~s~~~~~~~~~~~~~--------- 184 (405)
T TIGR03449 123 WGVPLVHTAHTLAAVKNAALADGDT-------PEPEARR--IGEQQLVDNADRLIANTDEEARDLVRHYDA--------- 184 (405)
T ss_pred cCCCEEEeccchHHHHHHhccCCCC-------CchHHHH--HHHHHHHHhcCeEEECCHHHHHHHHHHcCC---------
Confidence 8999999999875322111100000 0001111 135667899999999999877766554432
Q ss_pred HHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCC
Q 001557 408 RARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPK 487 (1054)
Q Consensus 408 ~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~ 487 (1054)
...++.+||||+|.+.|.+.+ ......++..++++++|+++||+.+.
T Consensus 185 -------------~~~ki~vi~ngvd~~~~~~~~--------------------~~~~~~~~~~~~~~~~i~~~G~l~~~ 231 (405)
T TIGR03449 185 -------------DPDRIDVVAPGADLERFRPGD--------------------RATERARLGLPLDTKVVAFVGRIQPL 231 (405)
T ss_pred -------------ChhhEEEECCCcCHHHcCCCc--------------------HHHHHHhcCCCCCCcEEEEecCCCcc
Confidence 112899999999998886431 01122334445678899999999999
Q ss_pred CCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhc
Q 001557 488 KNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 566 (1054)
Q Consensus 488 Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~ 566 (1054)
||++.+++|+..+.+..+..++.+ |+|+..... ......+.+++.++++.++|.|.|+++.+++..+|+.|
T Consensus 232 K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g------~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~a-- 303 (405)
T TIGR03449 232 KAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSG------LATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAA-- 303 (405)
T ss_pred cCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCc------chHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhC--
Confidence 999999999999865444434665 667532100 01245678889999999999999999999999999999
Q ss_pred CCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 001557 567 TKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLK 646 (1054)
Q Consensus 567 ~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~ 646 (1054)
|++|+||..|+||++++|||+||+|||+++.||..|++.++.+|++++|.|+++++++|.+++++++.++++++++++
T Consensus 304 --d~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~ 381 (405)
T TIGR03449 304 --DVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDDPRTRIRMGAAAVE 381 (405)
T ss_pred --CEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHHHHhh
Q 001557 647 NIHQFSWPEHCKSYLSRISSCK 668 (1054)
Q Consensus 647 ~v~~fsw~~~a~~yl~~l~~~~ 668 (1054)
.+++|||+.++++|+++|.++.
T Consensus 382 ~~~~fsw~~~~~~~~~~y~~~~ 403 (405)
T TIGR03449 382 HAAGFSWAATADGLLSSYRDAL 403 (405)
T ss_pred HHHhCCHHHHHHHHHHHHHHHh
Confidence 8888999999999999999765
No 13
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=1.8e-38 Score=378.08 Aligned_cols=453 Identities=19% Similarity=0.178 Sum_probs=289.0
Q ss_pred cceEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCc-cccccccccc
Q 001557 164 KKLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEP-SEMLNRKNTE 242 (1054)
Q Consensus 164 ~~mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~-~~~l~~~~~~ 242 (1054)
++||||+||.... |+ ..|||...++..|.++|+++ | |+|.|+++.+..-... ..... ...++.....
T Consensus 2 ~~~~il~v~~E~~----p~-----~k~ggl~dv~~~lp~~l~~~-g-~~v~v~~P~y~~~~~~-~~~~~~~~~~~~~~~~ 69 (485)
T PRK14099 2 TPLRVLSVASEIF----PL-----IKTGGLADVAGALPAALKAH-G-VEVRTLVPGYPAVLAG-IEDAEQVHSFPDLFGG 69 (485)
T ss_pred CCcEEEEEEeccc----cc-----cCCCcHHHHHHHHHHHHHHC-C-CcEEEEeCCCcchhhh-hcCceEEEEEeeeCCc
Confidence 4699999999766 33 89999999999999999999 8 9999999865322100 00000 0001000000
Q ss_pred ccccccCCCCCeEEEEccCCCCCcccccc-cCCCC--hHHHHHHHHHHHHHHHHHHhhhhcCC-CCCcceEEEEcCCCch
Q 001557 243 NLMQGLGESSGAYIIRIPFGPKDKYVQKE-LLWPH--IPEFVDAALTHIIQISKVLGEQVGSG-QPIWPVAIHGHYADAG 318 (1054)
Q Consensus 243 ~~~~~~~~~~g~~i~rip~g~~~~~l~k~-~l~~~--l~~f~~~~l~~i~~~~k~L~~~~~~~-~~~~pDVIh~h~~~a~ 318 (1054)
.+.-.....+|+.++.+... .|..+. .++.. ...+.|.+.+++. +.++..+.+... ...+|||||+|+|.++
T Consensus 70 ~~~~~~~~~~~v~~~~~~~~---~~f~r~~~~y~~~~~~~~~d~~~rf~~-f~~a~~~~~~~~~~~~~pDIiH~Hdw~~~ 145 (485)
T PRK14099 70 PARLLAARAGGLDLFVLDAP---HLYDRPGNPYVGPDGKDWPDNAQRFAA-LARAAAAIGQGLVPGFVPDIVHAHDWQAG 145 (485)
T ss_pred eEEEEEEEeCCceEEEEeCh---HhhCCCCCCCCCccCCCCCcHHHHHHH-HHHHHHHHHhhhccCCCCCEEEECCcHHH
Confidence 00000011246666665432 222222 12211 1123355555543 233333332221 1367999999999999
Q ss_pred HHHHHHHc--cCCCCEEEEeCCCccchH---HHHHHhCCCChhhhh-hHhHHHHHHHHHHhhhccCCEEEecCHHHHHHH
Q 001557 319 DAAALLSG--ALNVPMVFTGHSLGRDKL---EQLLKQGRLSRDEIN-TTYKIMRRIEAEELSLDASEIVITSTRQEIEEQ 392 (1054)
Q Consensus 319 ~~a~~l~~--~~~iP~V~t~H~l~~~~~---~~l~~~g~~~~~~i~-~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~ 392 (1054)
+++.++.. ..++|+|+|+|++..+.. ..+...|. .+.... ....+...+...+.++..||.|+|+|+..++++
T Consensus 146 l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a~ei 224 (485)
T PRK14099 146 LAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGL-PPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYALEI 224 (485)
T ss_pred HHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCC-ChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHHHHH
Confidence 98887753 357899999999854321 11111111 111100 000111112234567899999999999988887
Q ss_pred HhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCC-chhHHHhhhcC
Q 001557 393 WRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDP-PIWSEIMHFFS 471 (1054)
Q Consensus 393 ~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 471 (1054)
...+.+. .++..|+. ...++.+||||||.+.|.|.....-. ..+........+ .....++++..
T Consensus 225 ~~~~~g~--gl~~~l~~-----------~~~ki~vI~NGID~~~f~p~~~~~~~--~~~~~~~~~~k~~~k~~l~~~~gl 289 (485)
T PRK14099 225 QGPEAGM--GLDGLLRQ-----------RADRLSGILNGIDTAVWNPATDELIA--ATYDVETLAARAANKAALQARFGL 289 (485)
T ss_pred hcccCCc--ChHHHHHh-----------hCCCeEEEecCCchhhccccccchhh--hcCChhHHHhHHHhHHHHHHHcCC
Confidence 5443221 11112222 12389999999999999875421100 000000000000 01112233443
Q ss_pred C--CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCE-Ee
Q 001557 472 N--PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQV-AY 548 (1054)
Q Consensus 472 ~--~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V-~~ 548 (1054)
+ ++.++|+++||+.++||++.+++|+..+.+ ....+ +|+|+++. ++...+.+++.+++ +++ .|
T Consensus 290 ~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~--~~~~l-vivG~G~~---------~~~~~l~~l~~~~~--~~v~~~ 355 (485)
T PRK14099 290 DPDPDALLLGVISRLSWQKGLDLLLEALPTLLG--EGAQL-ALLGSGDA---------ELEARFRAAAQAYP--GQIGVV 355 (485)
T ss_pred CcccCCcEEEEEecCCccccHHHHHHHHHHHHh--cCcEE-EEEecCCH---------HHHHHHHHHHHHCC--CCEEEE
Confidence 3 357899999999999999999999998853 22333 47787752 23456667777664 344 68
Q ss_pred CCCCCCCcHHHHHH-HhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeC---------CceEEeCCC
Q 001557 549 PKHHKQSDVPDIYR-LAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVL---------DNGLLVDPH 618 (1054)
Q Consensus 549 ~g~~~~~dl~~ly~-~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~---------~~Gllv~p~ 618 (1054)
.|+ .++++.+|. .| |+||+||.+||||++++|||+||+|+|++++||+.|+|.++ .+|++|+|.
T Consensus 356 ~G~--~~~l~~~~~a~a----Difv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~ 429 (485)
T PRK14099 356 IGY--DEALAHLIQAGA----DALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPV 429 (485)
T ss_pred eCC--CHHHHHHHHhcC----CEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCC
Confidence 887 689999886 47 99999999999999999999999988889999999998775 589999999
Q ss_pred CHHHHHHHHHH---HHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhc
Q 001557 619 DQQSIADALLK---LVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQR 670 (1054)
Q Consensus 619 d~~~la~aI~~---ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~~~~ 670 (1054)
|+++++++|.+ +++|++.+++++++++. +.|||+..+++|+++|+++...
T Consensus 430 d~~~La~ai~~a~~l~~d~~~~~~l~~~~~~--~~fSw~~~a~~y~~lY~~l~~~ 482 (485)
T PRK14099 430 TADALAAALRKTAALFADPVAWRRLQRNGMT--TDVSWRNPAQHYAALYRSLVAE 482 (485)
T ss_pred CHHHHHHHHHHHHHHhcCHHHHHHHHHHhhh--hcCChHHHHHHHHHHHHHHHhh
Confidence 99999999997 66799999999998873 6899999999999999988653
No 14
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=1.4e-38 Score=380.91 Aligned_cols=447 Identities=19% Similarity=0.213 Sum_probs=289.5
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCc-cCCcccc--cccc-cc
Q 001557 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWT-YAEPSEM--LNRK-NT 241 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~-~~~~~~~--l~~~-~~ 241 (1054)
|||++||.+.++ . ..+||+..++..|+++|+++ | |+|.|+++.+........ ..+.... +..+ ..
T Consensus 1 m~i~~vs~E~~P----~-----~k~GGl~~~v~~L~~aL~~~-G-~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (473)
T TIGR02095 1 MRVLFVAAEMAP----F-----AKTGGLADVVGALPKALAAL-G-HDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRT 69 (473)
T ss_pred CeEEEEEecccc----c-----cCcCcHHHHHHHHHHHHHHc-C-CeEEEEecCCcChhhhhccCeEEEEEEEEeecCce
Confidence 899999997551 1 56899999999999999999 8 999999986542111000 0000000 0000 00
Q ss_pred cccccccCCCCCeEEEEccCCCCCccccc-ccCCC--ChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCch
Q 001557 242 ENLMQGLGESSGAYIIRIPFGPKDKYVQK-ELLWP--HIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAG 318 (1054)
Q Consensus 242 ~~~~~~~~~~~g~~i~rip~g~~~~~l~k-~~l~~--~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~ 318 (1054)
....-.....+|+.++++.... +..+ ..++. +... +.+++ .+.+...+.+.. ...+|||||+|+|.++
T Consensus 70 ~~~~~~~~~~~~v~~~~i~~~~---~~~r~~~~y~~~~~d~----~~r~~-~f~~a~~~~~~~-~~~~~DiiH~hdw~~~ 140 (473)
T TIGR02095 70 LYVKVFEGVVEGVPVYFIDNPS---LFDRPGGIYGDDYPDN----AERFA-FFSRAAAELLSG-LGWQPDVVHAHDWHTA 140 (473)
T ss_pred eEEEEEEEEECCceEEEEECHH---HcCCCCCCCCCCCCCH----HHHHH-HHHHHHHHHHHh-cCCCCCEEEECCcHHH
Confidence 0000001233688888887542 1222 12332 2221 11111 122222222221 1256999999999999
Q ss_pred HHHHHHHccCC---CCEEEEeCCCccchH--HHHHHhCCCChhhhh-hHhHHHHHHHHHHhhhccCCEEEecCHHHHHHH
Q 001557 319 DAAALLSGALN---VPMVFTGHSLGRDKL--EQLLKQGRLSRDEIN-TTYKIMRRIEAEELSLDASEIVITSTRQEIEEQ 392 (1054)
Q Consensus 319 ~~a~~l~~~~~---iP~V~t~H~l~~~~~--~~l~~~g~~~~~~i~-~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~ 392 (1054)
.++.+++...+ +|+|+|+|++..+.. ...+....+...... ..+.+..++..++.++..||.|+++|+.+++++
T Consensus 141 ~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei 220 (473)
T TIGR02095 141 LVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAREI 220 (473)
T ss_pred HHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHHHHh
Confidence 99998887766 999999999864321 011111011110000 000111123445678999999999999888876
Q ss_pred HhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCC-CCCchhHHHhhhcC
Q 001557 393 WRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPAS-PDPPIWSEIMHFFS 471 (1054)
Q Consensus 393 ~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 471 (1054)
.....+. .++..++. ...++.+||||||.+.|.|.....-. ..+...... ........++++..
T Consensus 221 ~~~~~~~--~l~~~l~~-----------~~~ki~~I~NGid~~~~~p~~~~~~~--~~~~~~~~~~k~~~k~~l~~~~gl 285 (473)
T TIGR02095 221 LTPEFGY--GLDGVLKA-----------RSGKLRGILNGIDTEVWNPATDPYLK--ANYSADDLAGKAENKEALQEELGL 285 (473)
T ss_pred cCCcCCc--cchhHHHh-----------cCCCeEEEeCCCCccccCCCCCcccc--cCcCccchhhhhhhHHHHHHHcCC
Confidence 5432111 11111111 12389999999999999875321100 000000000 00011122333443
Q ss_pred CC--CCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeC
Q 001557 472 NP--RKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYP 549 (1054)
Q Consensus 472 ~~--~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~ 549 (1054)
+. +.++|+++||+.+.||++.+++|+..+.+ ....+ +|+|+++. .+...+.+++.+++ .++.+.
T Consensus 286 ~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l-vi~G~g~~---------~~~~~l~~~~~~~~--~~v~~~ 351 (473)
T TIGR02095 286 PVDDDVPLFGVISRLTQQKGVDLLLAALPELLE--LGGQL-VVLGTGDP---------ELEEALRELAERYP--GNVRVI 351 (473)
T ss_pred CccCCCCEEEEEecCccccChHHHHHHHHHHHH--cCcEE-EEECCCCH---------HHHHHHHHHHHHCC--CcEEEE
Confidence 33 78999999999999999999999999863 22233 47787751 23455666766654 568787
Q ss_pred CCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeC------CceEEeCCCCHHHH
Q 001557 550 KHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVL------DNGLLVDPHDQQSI 623 (1054)
Q Consensus 550 g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~------~~Gllv~p~d~~~l 623 (1054)
+.++.+++..+|+.| |++|+||..||||++++|||+||+|||+++.||..|+|.++ .+|++++|.|++++
T Consensus 352 ~~~~~~~~~~~~~~a----Dv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~l 427 (473)
T TIGR02095 352 IGYDEALAHLIYAGA----DFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGAL 427 (473)
T ss_pred EcCCHHHHHHHHHhC----CEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHH
Confidence 777778889999999 99999999999999999999999999999999999999987 89999999999999
Q ss_pred HHHHHHHHh----CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Q 001557 624 ADALLKLVS----DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSC 667 (1054)
Q Consensus 624 a~aI~~ll~----d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~ 667 (1054)
+++|.+++. +++.++++++++++ +.|||+.++++|+++|+++
T Consensus 428 a~~i~~~l~~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 428 LAALSRALRLYRQDPSLWEALQKNAMS--QDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhc--cCCCcHHHHHHHHHHHHhC
Confidence 999999998 89999999888763 5899999999999999864
No 15
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=2.2e-38 Score=377.71 Aligned_cols=451 Identities=15% Similarity=0.161 Sum_probs=291.2
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCC-CccCCc--ccccc--ccc
Q 001557 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVD-WTYAEP--SEMLN--RKN 240 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~-~~~~~~--~~~l~--~~~ 240 (1054)
|||++||.... |+ ..|||....+..|+++|+++ | |+|.|+++.+..-... +..... ...+. .+.
T Consensus 6 ~~il~v~~E~~----p~-----~k~Ggl~dv~~~Lp~al~~~-g-~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (489)
T PRK14098 6 FKVLYVSGEVS----PF-----VRVSALADFMASFPQALEEE-G-FEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKE 74 (489)
T ss_pred cEEEEEeecch----hh-----cccchHHHHHHHHHHHHHHC-C-CeEEEEcCCCCchhhhhhccccceEEEEEEEeecC
Confidence 99999998766 34 89999999999999999999 8 9999999865332100 000000 00010 000
Q ss_pred cccccc---ccCCCCCeEEEEccCCCCCcccccccCCCCh---HHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcC
Q 001557 241 TENLMQ---GLGESSGAYIIRIPFGPKDKYVQKELLWPHI---PEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHY 314 (1054)
Q Consensus 241 ~~~~~~---~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l---~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~ 314 (1054)
...... ......++.++.+... .|..+..++..- ..+.|.+.++.. +.++..+.+.. ...+|||||+|+
T Consensus 75 ~~~~~~~~~~~~~~~~v~~~~~~~~---~~f~r~~~y~~~~~g~~~~d~~~rf~~-f~~a~l~~~~~-~~~~pDiiH~hd 149 (489)
T PRK14098 75 KTDLLHVKVTALPSSKIQTYFLYNE---KYFKRNGLFTDMSLGGDLKGSAEKVIF-FNVGVLETLQR-LGWKPDIIHCHD 149 (489)
T ss_pred eeEEEEEEEecccCCCceEEEEeCH---HHcCCCCcCCCCccCCCCCcHHHHHHH-HHHHHHHHHHh-cCCCCCEEEecC
Confidence 000000 0011124555554322 233333333210 112344444433 22222232221 125799999999
Q ss_pred CCchHHHHHHHccC-------CCCEEEEeCCCccchHHH--HHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecC
Q 001557 315 ADAGDAAALLSGAL-------NVPMVFTGHSLGRDKLEQ--LLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITST 385 (1054)
Q Consensus 315 ~~a~~~a~~l~~~~-------~iP~V~t~H~l~~~~~~~--l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S 385 (1054)
|.+++++.+++... ++|+|+|+|++..+.... .+.. .+..............+...+..+..||.|+|+|
T Consensus 150 w~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~-~~~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS 228 (489)
T PRK14098 150 WYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQK-LLPEEVCSGLHREGDEVNMLYTGVEHADLLTTTS 228 (489)
T ss_pred cHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHH-hCCHHhhhhhhhcCCcccHHHHHHHhcCcceeeC
Confidence 99999998886543 899999999986432110 0000 0111100000000012334566899999999999
Q ss_pred HHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCC-CCchhH
Q 001557 386 RQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASP-DPPIWS 464 (1054)
Q Consensus 386 ~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 464 (1054)
+.+++++... ..+.-.+...|+.+ ..++.+||||||.+.|.|..... ....+....... ......
T Consensus 229 ~~~a~ei~~~-~~~~~gl~~~l~~~-----------~~kl~~I~NGID~~~~~p~~d~~--~~~~~~~~~~~~k~~~k~~ 294 (489)
T PRK14098 229 PRYAEEIAGD-GEEAFGLDKVLEER-----------KMRLHGILNGIDTRQWNPSTDKL--IKKRYSIERLDGKLENKKA 294 (489)
T ss_pred HHHHHHhCcC-CCCCcChHHHHHhc-----------CCCeeEEeCCccccccCCccccc--ccccCCcchhhhHHHHHHH
Confidence 9998886432 01111223333332 23899999999999998754211 000000000000 000111
Q ss_pred HHhhhcC--CCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcC
Q 001557 465 EIMHFFS--NPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYD 541 (1054)
Q Consensus 465 ~~~~~~~--~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~ 541 (1054)
.++++.. +++.|+|+++||+.+.||++.+++|+..+.+ . ++.| |+|+++. .+...+.+++.+++
T Consensus 295 l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~--~--~~~lvivG~G~~---------~~~~~l~~l~~~~~ 361 (489)
T PRK14098 295 LLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE--L--DIQLVICGSGDK---------EYEKRFQDFAEEHP 361 (489)
T ss_pred HHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh--c--CcEEEEEeCCCH---------HHHHHHHHHHHHCC
Confidence 2223333 2467899999999999999999999999853 2 4444 7788752 23466777777764
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceee----CCceEEeCC
Q 001557 542 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV----LDNGLLVDP 617 (1054)
Q Consensus 542 l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~----~~~Gllv~p 617 (1054)
++|.|.+.++.+++..+|+.| |+||+||..||||++.+|||+||+|+|+++.||..|++.+ +.+|++|++
T Consensus 362 --~~V~~~g~~~~~~~~~~~a~a----Di~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~ 435 (489)
T PRK14098 362 --EQVSVQTEFTDAFFHLAIAGL----DMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHD 435 (489)
T ss_pred --CCEEEEEecCHHHHHHHHHhC----CEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEeCC
Confidence 689999999888899999999 9999999999999999999999999999999999998864 679999999
Q ss_pred CCHHHHHHHHHHHH---hCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Q 001557 618 HDQQSIADALLKLV---SDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCK 668 (1054)
Q Consensus 618 ~d~~~la~aI~~ll---~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~~ 668 (1054)
.|+++++++|.+++ .+++.|+++++++++ +.|||+..+++|+++|+++.
T Consensus 436 ~d~~~la~ai~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~y~~lY~~~~ 487 (489)
T PRK14098 436 YTPEALVAKLGEALALYHDEERWEELVLEAME--RDFSWKNSAEEYAQLYRELL 487 (489)
T ss_pred CCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--CCCChHHHHHHHHHHHHHHh
Confidence 99999999999876 588888888776643 69999999999999999875
No 16
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=1.1e-37 Score=363.40 Aligned_cols=395 Identities=40% Similarity=0.623 Sum_probs=298.5
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccccccc
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 246 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 246 (1054)
||++++.|+++-+ -+..|+.||+++++.+|+++|+++ | |+|+|+|.....+.. .
T Consensus 1 ~~~~~~~~~~~~~----~~~~~~~GG~~~~~~~l~~~L~~~-g-~~V~v~~~~~~~~~~--------------------~ 54 (398)
T cd03800 1 RIALISLHGSPLA----QPGGADTGGQNVYVLELARALARL-G-HEVDIFTRRIDDALP--------------------P 54 (398)
T ss_pred CeEEEeccccccc----cCCCCCCCceeehHHHHHHHHhcc-C-ceEEEEEecCCcccC--------------------C
Confidence 5788888876433 222578899999999999999999 8 999999975321110 0
Q ss_pred ccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHc
Q 001557 247 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSG 326 (1054)
Q Consensus 247 ~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~ 326 (1054)
.....+++.+++++..+. .+..+..+++++..|...+...+. .. ..+||+||+|++..+.++..+++
T Consensus 55 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------~~-----~~~~Div~~~~~~~~~~~~~~~~ 121 (398)
T cd03800 55 IVELAPGVRVVRVPAGPA-EYLPKEELWPYLDEFADDLLRFLR-------RE-----GGRPDLIHAHYWDSGLVALLLAR 121 (398)
T ss_pred ccccccceEEEecccccc-cCCChhhcchhHHHHHHHHHHHHH-------hc-----CCCccEEEEecCccchHHHHHHh
Confidence 012235889999887665 344555566666555444433332 11 02699999999888888888888
Q ss_pred cCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHH
Q 001557 327 ALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK 406 (1054)
Q Consensus 327 ~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~ 406 (1054)
..++|+|++.|++........... ..+....+...|..+++.+|.|+++|+...+.+...+...
T Consensus 122 ~~~~~~i~~~h~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~------- 185 (398)
T cd03800 122 RLGIPLVHTFHSLGAVKRRHLGAA---------DTYEPARRIEAEERLLRAADRVIASTPQEAEELYSLYGAY------- 185 (398)
T ss_pred hcCCceEEEeecccccCCcccccc---------cccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHHcccc-------
Confidence 999999999998765432111000 0011122233467789999999999998877765554321
Q ss_pred HHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCC
Q 001557 407 LRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDP 486 (1054)
Q Consensus 407 l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~ 486 (1054)
..++.+||||+|.+.|.+..... ..+..+...+++++|+++||+.+
T Consensus 186 ---------------~~~~~vi~ng~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~i~~~gr~~~ 231 (398)
T cd03800 186 ---------------PRRIRVVPPGVDLERFTPYGRAE-------------------ARRARLLRDPDKPRILAVGRLDP 231 (398)
T ss_pred ---------------ccccEEECCCCCccceecccchh-------------------hHHHhhccCCCCcEEEEEccccc
Confidence 12689999999998886532110 00222333567889999999999
Q ss_pred CCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhh
Q 001557 487 KKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAA 565 (1054)
Q Consensus 487 ~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa 565 (1054)
.||++.+++|+..+.+.. +++.+ ++|++..... ......+..+++.+++.+++.|+|+++.+++..+|+.|
T Consensus 232 ~k~~~~ll~a~~~l~~~~--~~~~l~i~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a- 303 (398)
T cd03800 232 RKGIDTLIRAYAELPELR--ERANLVIVGGPRDDIL-----AMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAA- 303 (398)
T ss_pred ccCHHHHHHHHHHHHHhC--CCeEEEEEECCCCcch-----hhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhC-
Confidence 999999999999996543 34444 6676653211 11234577888889998999999999999999999999
Q ss_pred cCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 001557 566 KTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGL 645 (1054)
Q Consensus 566 ~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~ 645 (1054)
|++|+||..|+||++++||||||+|||+++.||..|++.++.+|+++++.|+++++++|.+++++++.+++++++++
T Consensus 304 ---di~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~a~ 380 (398)
T cd03800 304 ---DVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLSRAGL 380 (398)
T ss_pred ---CEEEecccccccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998999999999999999999999999999999999999
Q ss_pred HHH-hcCCHHHHHHHHH
Q 001557 646 KNI-HQFSWPEHCKSYL 661 (1054)
Q Consensus 646 ~~v-~~fsw~~~a~~yl 661 (1054)
+.+ ++|||+.++++|+
T Consensus 381 ~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 381 RRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHhCCHHHHHHHHh
Confidence 999 7999999999886
No 17
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=9.1e-41 Score=380.73 Aligned_cols=481 Identities=33% Similarity=0.419 Sum_probs=363.8
Q ss_pred hhhhhhhccCCCCCCCCCCccccCCCCC---CCCCCCCCchhhhhhhhhhccCcc-eEEEEEecccccccCCcCCCCCCC
Q 001557 114 ASADMSEDLSEGDKGDVSGELSAHGGST---RGRMPRISSVDTMENWAIQYKEKK-LYIVLISLHGLIRGENMELGRDSD 189 (1054)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-mkIllis~h~~~r~~~~elg~~~~ 189 (1054)
++.|+++++|+++|.+........+... ..++.+......+..|+.+.+.-. +.+++. |++ +|| +||
T Consensus 1 ~~~~~~~~~~~~qk~~~~~m~~~~~~~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s-------~~~-~lg-~~d 71 (495)
T KOG0853|consen 1 MTNDSSSNISELQKVLWKAMIEKSLLVSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS-------GQD-VLG-LPD 71 (495)
T ss_pred CcchhhhHHHHhhhhhhhhhhhhhcccccccccchhheeeccccccCchHHHhHHHHHHHHh-------ccc-ccC-CCC
Confidence 4678899999999988666554433311 122333333336777776664432 333333 568 899 999
Q ss_pred CCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCcccc
Q 001557 190 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQ 269 (1054)
Q Consensus 190 tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~ 269 (1054)
+||++.|+++.+++|. +|+++.+...|++...+.....+..|.++. .+.+......+++++++|++....+.
T Consensus 72 ~G~qV~~l~~h~~al~-~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~------~~~~~~~~~~~~~il~~~~~~~~k~~- 143 (495)
T KOG0853|consen 72 TGGQVVYLTSHEDALE-MPLLLRCFAETLDGTPPILVVGDWLPRAMG------QFLEQVAGCAYLRILRIPFGILFKWA- 143 (495)
T ss_pred CCceEEEEehhhhhhc-chHHHHHHHHHhcCCCceEEEEeecCcccc------hhhhhhhccceeEEEEeccchhhhhh-
Confidence 9999999999999997 666666666666554444434444444432 12244555679999999998876555
Q ss_pred cccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHH
Q 001557 270 KELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLK 349 (1054)
Q Consensus 270 k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~ 349 (1054)
..+||++..|+.... + |.+++. . ||++|.++|+.++...++++++|++.+++.|.++..+.+....
T Consensus 144 -~~~d~~i~d~~~~~~-~-------l~~~~~----~-p~~~~~i~~~~h~~~~lla~r~g~~~~l~~~~l~~~e~e~~~~ 209 (495)
T KOG0853|consen 144 -EKVDPIIEDFVSACV-P-------LLKQLS----G-PDVIIKIYFYCHFPDSLLAKRLGVLKVLYRHALDKIEEETTGL 209 (495)
T ss_pred -hhhceeecchHHHHH-H-------HHHHhc----C-CcccceeEEeccchHHHhccccCccceeehhhhhhhhhhhhhc
Confidence 778999998874332 2 222222 2 9999999999999999999999999999999999988877655
Q ss_pred hCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeC
Q 001557 350 QGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIP 429 (1054)
Q Consensus 350 ~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIP 429 (1054)
+++ .+...|.+.+++..+...+..+| ++++.++++.+|..|+.++..++..++.|..+||++.+++++++..|+
T Consensus 210 ~~~----~~~ns~~~~~~f~~~~~~L~~~d--~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~~d~~~~siN~~~ 283 (495)
T KOG0853|consen 210 AWK----ILVNSYFTKRQFKATFVSLSNSD--ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSGIDRFFPSINRFE 283 (495)
T ss_pred cce----EecchhhhhhhhhhhhhhcCCCC--cceeeccccchhccccccccchhcccccceeeeecccceEeeeeeecC
Confidence 443 36678889999999999999999 888899999999999999888888888888888888887777777777
Q ss_pred CCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhccccc---CC
Q 001557 430 PGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLR---EL 506 (1054)
Q Consensus 430 nGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~---~~ 506 (1054)
+|.|...+. +||..+...- +.
T Consensus 284 pgkd~~l~l--------------------------------------------------------~a~~~~~~~i~~~~~ 307 (495)
T KOG0853|consen 284 PGKDQDLAL--------------------------------------------------------PAFTLLHDSIPEPSI 307 (495)
T ss_pred CCCCceeeh--------------------------------------------------------hhHHhhhcccCCCCC
Confidence 777765543 2444443222 22
Q ss_pred CcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCC-CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHH
Q 001557 507 ANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLY-GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTL 584 (1054)
Q Consensus 507 ~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~-~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l 584 (1054)
+...+ ++|+. .+++..+++.+++.++..+++++++. ..|.|..++++.+. |+.++.++.+++.|+. |.||+|.
T Consensus 308 ~~~hl~~~g~~-G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~---yrl~adt~~v~~qPa~-E~FGiv~ 382 (495)
T KOG0853|consen 308 SSEHLVVAGSR-GYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTTRVAK---YRLAADTKGVLYQPAN-EHFGIVP 382 (495)
T ss_pred CceEEEEecCC-CccccchhhHHHHHHHHHHHHHhCccCceEEEecCCchHHH---HHHHHhcceEEecCCC-CCcccee
Confidence 44555 44432 27788889999999999999999996 45667688665544 7777788899999988 9999999
Q ss_pred HHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHH---HHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHH
Q 001557 585 IEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQ---SIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSY 660 (1054)
Q Consensus 585 ~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~---~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~y 660 (1054)
+||||||+|||||++||+.|+|.++.+|++++| +.+ .||++|.++.+||+.|.+|+++|++++ +.|+|. .|
T Consensus 383 IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~~~~a~~~~kl~~~p~l~~~~~~~G~~rV~e~fs~~----~~ 457 (495)
T KOG0853|consen 383 IEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQEAVAELADALLKLRRDPELWARMGKNGLKRVKEMFSWQ----HY 457 (495)
T ss_pred HHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhHH----HH
Confidence 999999999999999999999999999999999 666 599999999999999999999999999 579995 55
Q ss_pred HHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCccccccccccccccc
Q 001557 661 LSRISSCKQRQPRWQRSDDGLDNSESDSPGDSWRDIHDLSLNLKLSL 707 (1054)
Q Consensus 661 l~~l~~~~~~~~~~~~~~~~~~~s~~~~~~~~lr~~~~~~~~~~~~~ 707 (1054)
.+.+..+....++|+... ..++++++.+++++++++.
T Consensus 458 ~~ri~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~ 494 (495)
T KOG0853|consen 458 SERIASVLGKYLQWEKVS----------SLDSLEDRRYISLFYALSF 494 (495)
T ss_pred HHHHHHHhHhcCCccccc----------ccccccccccHHHHHHhhc
Confidence 555555555666666543 3778999999997776664
No 18
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=1e-36 Score=358.63 Aligned_cols=398 Identities=15% Similarity=0.143 Sum_probs=284.9
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCC--ccCCcccccccccccc
Q 001557 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDW--TYAEPSEMLNRKNTEN 243 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~--~~~~~~~~l~~~~~~~ 243 (1054)
|||+++|.+++ |+.||.+.++.+|+++|.+. | |+|+|+|+....|.... .+....
T Consensus 1 mkIlii~~~~~-----------P~~~g~~~~~~~l~~~L~~~-G-~~V~vit~~~~~~~~~~~~~~~~~~---------- 57 (412)
T PRK10307 1 MKILVYGINYA-----------PELTGIGKYTGEMAEWLAAR-G-HEVRVITAPPYYPQWRVGEGYSAWR---------- 57 (412)
T ss_pred CeEEEEecCCC-----------CCccchhhhHHHHHHHHHHC-C-CeEEEEecCCCCCCCCCCccccccc----------
Confidence 89999997544 77899999999999999999 8 99999997532222110 011000
Q ss_pred cccccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCC--chHHH
Q 001557 244 LMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYAD--AGDAA 321 (1054)
Q Consensus 244 ~~~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~--a~~~a 321 (1054)
......+|+.++|+|....... . .+.... ....+.....+.+...+ . .+||+||+|.+. .+..+
T Consensus 58 --~~~~~~~~i~v~r~~~~~~~~~----~---~~~~~~-~~~~~~~~~~~~~~~~~---~-~~~Div~~~~p~~~~~~~~ 123 (412)
T PRK10307 58 --YRRESEGGVTVWRCPLYVPKQP----S---GLKRLL-HLGSFALSSFFPLLAQR---R-WRPDRVIGVVPTLFCAPGA 123 (412)
T ss_pred --ceeeecCCeEEEEccccCCCCc----c---HHHHHH-HHHHHHHHHHHHHhhcc---C-CCCCEEEEeCCcHHHHHHH
Confidence 0011246899999986432100 0 011111 11112222222222211 1 469999999753 34566
Q ss_pred HHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCCh
Q 001557 322 ALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP 401 (1054)
Q Consensus 322 ~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~ 401 (1054)
..+++..++|+|+++|+++.+... ..|..... ...++... .|+++++.+|.|+++|+...+.+... +..
T Consensus 124 ~~~~~~~~~~~v~~~~d~~~~~~~---~~~~~~~~---~~~~~~~~--~~~~~~~~ad~ii~~S~~~~~~~~~~--~~~- 192 (412)
T PRK10307 124 RLLARLSGARTWLHIQDYEVDAAF---GLGLLKGG---KVARLATA--FERSLLRRFDNVSTISRSMMNKAREK--GVA- 192 (412)
T ss_pred HHHHHhhCCCEEEEeccCCHHHHH---HhCCccCc---HHHHHHHH--HHHHHHhhCCEEEecCHHHHHHHHHc--CCC-
Confidence 777888899999999998764422 22222111 11122222 37778999999999999887765332 111
Q ss_pred HHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEE
Q 001557 402 VLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILAL 481 (1054)
Q Consensus 402 ~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~v 481 (1054)
..++.+||||+|.+.|.+.... ........+..+++.++|+|+
T Consensus 193 --------------------~~~i~vi~ngvd~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~i~~~ 235 (412)
T PRK10307 193 --------------------AEKVIFFPNWSEVARFQPVADA-----------------DVDALRAQLGLPDGKKIVLYS 235 (412)
T ss_pred --------------------cccEEEECCCcCHhhcCCCCcc-----------------chHHHHHHcCCCCCCEEEEEc
Confidence 1289999999999888753210 011122334445667899999
Q ss_pred eCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHH
Q 001557 482 ARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDI 560 (1054)
Q Consensus 482 gRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~l 560 (1054)
||+.+.||++.+++|+..+.+ .+++.| |+|+++. .+.+.+++.++++. +|.|+|+++.++++.+
T Consensus 236 G~l~~~kg~~~li~a~~~l~~---~~~~~l~ivG~g~~-----------~~~l~~~~~~~~l~-~v~f~G~~~~~~~~~~ 300 (412)
T PRK10307 236 GNIGEKQGLELVIDAARRLRD---RPDLIFVICGQGGG-----------KARLEKMAQCRGLP-NVHFLPLQPYDRLPAL 300 (412)
T ss_pred CccccccCHHHHHHHHHHhcc---CCCeEEEEECCChh-----------HHHHHHHHHHcCCC-ceEEeCCCCHHHHHHH
Confidence 999999999999999998742 345554 7888764 35577788888886 7999999999999999
Q ss_pred HHHhhcCCcEEEecCCCCC----CcHHHHHHHHcCCCEEEccccC--cccceeeCCceEEeCCCCHHHHHHHHHHHHhCH
Q 001557 561 YRLAAKTKGVFINPAFIEP----FGLTLIEAAAYGLPIVATKNGG--PVDIHRVLDNGLLVDPHDQQSIADALLKLVSDK 634 (1054)
Q Consensus 561 y~~Aa~~~dv~v~ps~~Eg----fgl~l~EAmA~G~PVIat~~Gg--~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~ 634 (1054)
|+.| |++|+|+..|+ +|.+++||||||+|||+|+.|| ..+++. .+|++++|.|+++++++|.++++|+
T Consensus 301 ~~~a----Di~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~~~~ 374 (412)
T PRK10307 301 LKMA----DCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALARQA 374 (412)
T ss_pred HHhc----CEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHHhCH
Confidence 9999 99999999998 5777899999999999999876 357776 6899999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHhhh
Q 001557 635 QLWERCRQNGLKNI-HQFSWPEHCKSYLSRISSCKQ 669 (1054)
Q Consensus 635 ~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~~~~~ 669 (1054)
+++++|++++++.+ ++|||+.++++|++.|+++..
T Consensus 375 ~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~ 410 (412)
T PRK10307 375 LLRPKLGTVAREYAERTLDKENVLRQFIADIRGLVA 410 (412)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc
Confidence 99999999999999 699999999999999998764
No 19
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=1.4e-36 Score=355.86 Aligned_cols=366 Identities=21% Similarity=0.230 Sum_probs=269.3
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccccccc
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 246 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 246 (1054)
||++++.... |..||.++++.+|+++|+++ | |+|.|+|+....+ .+.
T Consensus 1 kI~~v~~~~~-----------p~~GG~e~~~~~la~~L~~~-G-~~V~v~~~~~~~~-----~~~--------------- 47 (398)
T cd03796 1 RICMVSDFFY-----------PNLGGVETHIYQLSQCLIKR-G-HKVVVITHAYGNR-----VGI--------------- 47 (398)
T ss_pred CeeEEeeccc-----------cccccHHHHHHHHHHHHHHc-C-CeeEEEeccCCcC-----CCc---------------
Confidence 6899986433 67899999999999999999 8 9999999752100 000
Q ss_pred ccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCch--HHHHHH
Q 001557 247 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAG--DAAALL 324 (1054)
Q Consensus 247 ~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~--~~a~~l 324 (1054)
.....|+.++++|..+.. +.........+ +..+ .+.+.+ .+|||||+|..... ..+..+
T Consensus 48 -~~~~~~i~v~~~p~~~~~----~~~~~~~~~~~----~~~l---~~~~~~-------~~~DiIh~~~~~~~~~~~~~~~ 108 (398)
T cd03796 48 -RYLTNGLKVYYLPFVVFY----NQSTLPTFFGT----FPLL---RNILIR-------ERITIVHGHQAFSALAHEALLH 108 (398)
T ss_pred -ccccCceeEEEecceecc----CCccccchhhh----HHHH---HHHHHh-------cCCCEEEECCCCchHHHHHHHH
Confidence 011347888888864321 11111111111 1111 122211 56999999986433 346666
Q ss_pred HccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHH
Q 001557 325 SGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 404 (1054)
Q Consensus 325 ~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~ 404 (1054)
++..++|+|+|.|+++..... . . ....+ .++..++.+|.++++|+...+.+...+ ...
T Consensus 109 ~~~~~~~~v~t~h~~~~~~~~--------~----~---~~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~-~~~---- 166 (398)
T cd03796 109 ARTMGLKTVFTDHSLFGFADA--------S----S---IHTNK--LLRFSLADVDHVICVSHTSKENTVLRA-SLD---- 166 (398)
T ss_pred hhhcCCcEEEEecccccccch--------h----h---HHhhH--HHHHhhccCCEEEEecHhHhhHHHHHh-CCC----
Confidence 788899999999986431100 0 0 00111 134468899999999997665432221 111
Q ss_pred HHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCC
Q 001557 405 RKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARP 484 (1054)
Q Consensus 405 ~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRl 484 (1054)
..++.+||||+|.+.|.+.... .++++++|+++||+
T Consensus 167 -----------------~~k~~vi~ngvd~~~f~~~~~~---------------------------~~~~~~~i~~~grl 202 (398)
T cd03796 167 -----------------PERVSVIPNAVDSSDFTPDPSK---------------------------RDNDKITIVVISRL 202 (398)
T ss_pred -----------------hhhEEEEcCccCHHHcCCCccc---------------------------CCCCceEEEEEecc
Confidence 1289999999999888653210 13567899999999
Q ss_pred CCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHH
Q 001557 485 DPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRL 563 (1054)
Q Consensus 485 d~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~ 563 (1054)
.+.||++.+++|+..+.+. .+++.| ++|+++. ...+.++++++++.++|.|+|+++.+++..+|+.
T Consensus 203 ~~~Kg~~~li~a~~~l~~~--~~~~~l~i~G~g~~-----------~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ 269 (398)
T cd03796 203 VYRKGIDLLVGIIPEICKK--HPNVRFIIGGDGPK-----------RILLEEMREKYNLQDRVELLGAVPHERVRDVLVQ 269 (398)
T ss_pred chhcCHHHHHHHHHHHHhh--CCCEEEEEEeCCch-----------HHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHh
Confidence 9999999999999988643 345665 7787763 3557788899999999999999999999999999
Q ss_pred hhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 001557 564 AAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQN 643 (1054)
Q Consensus 564 Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~ 643 (1054)
| |++|+||..|+||++++||||||+|||+++.||..|++.++ .+++++ .|+++++++|.++++++.+...+.++
T Consensus 270 a----d~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~-~~~~~~-~~~~~l~~~l~~~l~~~~~~~~~~~~ 343 (398)
T cd03796 270 G----HIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPD-MILLAE-PDVESIVRKLEEAISILRTGKHDPWS 343 (398)
T ss_pred C----CEEEeCChhhccCHHHHHHHHcCCCEEECCCCCchhheeCC-ceeecC-CCHHHHHHHHHHHHhChhhhhhHHHH
Confidence 9 99999999999999999999999999999999999999764 455554 48999999999999987777677888
Q ss_pred HHHHH-hcCCHHHHHHHHHHHHHHhhh
Q 001557 644 GLKNI-HQFSWPEHCKSYLSRISSCKQ 669 (1054)
Q Consensus 644 ~~~~v-~~fsw~~~a~~yl~~l~~~~~ 669 (1054)
+++.+ ++|||+..+++|+++|+.+..
T Consensus 344 ~~~~~~~~fs~~~~~~~~~~~y~~l~~ 370 (398)
T cd03796 344 FHNRVKKMYSWEDVAKRTEKVYDRILQ 370 (398)
T ss_pred HHHHHHhhCCHHHHHHHHHHHHHHHhc
Confidence 88888 799999999999999998865
No 20
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=1.9e-36 Score=361.57 Aligned_cols=376 Identities=20% Similarity=0.237 Sum_probs=270.4
Q ss_pred CcceEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccc
Q 001557 163 EKKLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTE 242 (1054)
Q Consensus 163 ~~~mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~ 242 (1054)
.++|||++++ +.. + .+..||...++.+|+++|.++ | |+|+|+|.....+.
T Consensus 56 ~~~mrI~~~~-~~~----~-----~~~~gG~~~~~~~l~~~L~~~-G-~eV~vlt~~~~~~~------------------ 105 (465)
T PLN02871 56 SRPRRIALFV-EPS----P-----FSYVSGYKNRFQNFIRYLREM-G-DEVLVVTTDEGVPQ------------------ 105 (465)
T ss_pred CCCceEEEEE-CCc----C-----CcccccHHHHHHHHHHHHHHC-C-CeEEEEecCCCCCc------------------
Confidence 6789999997 322 1 256799999999999999999 8 99999997521110
Q ss_pred ccccccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCC-chHHH
Q 001557 243 NLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYAD-AGDAA 321 (1054)
Q Consensus 243 ~~~~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~-a~~~a 321 (1054)
...|+.+++++..+...+ .. ..+.+ .+... +.+.+.+ .+|||||+|... ....+
T Consensus 106 -------~~~g~~v~~~~~~~~~~~-~~-~~~~~--~~~~~-------l~~~i~~-------~kpDiIh~~~~~~~~~~~ 160 (465)
T PLN02871 106 -------EFHGAKVIGSWSFPCPFY-QK-VPLSL--ALSPR-------IISEVAR-------FKPDLIHASSPGIMVFGA 160 (465)
T ss_pred -------cccCceeeccCCcCCccC-CC-ceeec--cCCHH-------HHHHHHh-------CCCCEEEECCCchhHHHH
Confidence 012555554433221111 10 00000 00011 1222222 569999999863 34455
Q ss_pred HHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCCh
Q 001557 322 ALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP 401 (1054)
Q Consensus 322 ~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~ 401 (1054)
..+++..++|+|++.|+........+ . .....+... ..++..++.+|.|+++|+...+.+...+..
T Consensus 161 ~~~ak~~~ip~V~~~h~~~~~~~~~~------~---~~~~~~~~~--~~~r~~~~~ad~ii~~S~~~~~~l~~~~~~--- 226 (465)
T PLN02871 161 LFYAKLLCVPLVMSYHTHVPVYIPRY------T---FSWLVKPMW--DIIRFLHRAADLTLVTSPALGKELEAAGVT--- 226 (465)
T ss_pred HHHHHHhCCCEEEEEecCchhhhhcc------c---chhhHHHHH--HHHHHHHhhCCEEEECCHHHHHHHHHcCCC---
Confidence 56677889999999998654332111 0 000111111 124556889999999999887766543211
Q ss_pred HHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhc-CCCCCcEEEE
Q 001557 402 VLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFF-SNPRKPMILA 480 (1054)
Q Consensus 402 ~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Il~ 480 (1054)
+..++.+||||+|.+.|.|..... ....++. ..+++++|++
T Consensus 227 -------------------~~~kv~vi~nGvd~~~f~p~~~~~-------------------~~~~~~~~~~~~~~~i~~ 268 (465)
T PLN02871 227 -------------------AANRIRVWNKGVDSESFHPRFRSE-------------------EMRARLSGGEPEKPLIVY 268 (465)
T ss_pred -------------------CcCeEEEeCCccCccccCCccccH-------------------HHHHHhcCCCCCCeEEEE
Confidence 123899999999999887532110 1111221 2356789999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHH
Q 001557 481 LARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPD 559 (1054)
Q Consensus 481 vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ 559 (1054)
+||+.+.||++.+++++..+ +++.| |+|+++. ...+.+++.. .+|.|+|+++.++++.
T Consensus 269 vGrl~~~K~~~~li~a~~~~------~~~~l~ivG~G~~-----------~~~l~~~~~~----~~V~f~G~v~~~ev~~ 327 (465)
T PLN02871 269 VGRLGAEKNLDFLKRVMERL------PGARLAFVGDGPY-----------REELEKMFAG----TPTVFTGMLQGDELSQ 327 (465)
T ss_pred eCCCchhhhHHHHHHHHHhC------CCcEEEEEeCChH-----------HHHHHHHhcc----CCeEEeccCCHHHHHH
Confidence 99999999999999999876 24444 7888764 2344445443 3699999999999999
Q ss_pred HHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceee---CCceEEeCCCCHHHHHHHHHHHHhCHHH
Q 001557 560 IYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV---LDNGLLVDPHDQQSIADALLKLVSDKQL 636 (1054)
Q Consensus 560 ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~---~~~Gllv~p~d~~~la~aI~~ll~d~~~ 636 (1054)
+|+.| |++|+||..|+||++++||||||+|||+++.||..|++.+ +.+|++++|.|+++++++|.+++++++.
T Consensus 328 ~~~~a----Dv~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~~~~ 403 (465)
T PLN02871 328 AYASG----DVFVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLADPEL 403 (465)
T ss_pred HHHHC----CEEEECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhCHHH
Confidence 99999 9999999999999999999999999999999999999998 8999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHH-HHHHhhhc
Q 001557 637 WERCRQNGLKNIHQFSWPEHCKSYLS-RISSCKQR 670 (1054)
Q Consensus 637 ~~~~~~~~~~~v~~fsw~~~a~~yl~-~l~~~~~~ 670 (1054)
++++++++++.+++|||+..++++++ .|..+...
T Consensus 404 ~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~ 438 (465)
T PLN02871 404 RERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWF 438 (465)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999989999999999998 68877654
No 21
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=2.7e-36 Score=351.41 Aligned_cols=377 Identities=21% Similarity=0.298 Sum_probs=273.6
Q ss_pred eEEEEEecccccccCCcCCCCCCC-CCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccccc
Q 001557 166 LYIVLISLHGLIRGENMELGRDSD-TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENL 244 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~-tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~ 244 (1054)
|||++|+.+ + +|+ .||.+.++.+|+++|.+. ++|+|++.... .
T Consensus 1 mkI~~i~~~-~----------~p~~~GG~~~~v~~l~~~l~~~---~~v~v~~~~~~--~-------------------- 44 (388)
T TIGR02149 1 MKVTVLTRE-Y----------PPNVYGGAGVHVEELTRELARL---MDVDVRCFGDQ--R-------------------- 44 (388)
T ss_pred CeeEEEecc-c----------CccccccHhHHHHHHHHHHHHh---cCeeEEcCCCc--h--------------------
Confidence 899999864 3 255 499999999999999886 57888875310 0
Q ss_pred ccccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHH
Q 001557 245 MQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALL 324 (1054)
Q Consensus 245 ~~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l 324 (1054)
....++.+.+++.... . ......+..+ . ..+. .. ....+|||||+|.+.++..+..+
T Consensus 45 ----~~~~~~~~~~~~~~~~---~--~~~~~~~~~~----~---~~~~-~~------~~~~~~divh~~~~~~~~~~~~~ 101 (388)
T TIGR02149 45 ----FDSEGLTVKGYRPWSE---L--KEANKALGTF----S---VDLA-MA------NDPVDADVVHSHTWYTFLAGHLA 101 (388)
T ss_pred ----hcCCCeEEEEecChhh---c--cchhhhhhhh----h---HHHH-Hh------hCCCCCCeEeecchhhhhHHHHH
Confidence 0124777777654211 0 0000111111 0 0000 00 01135999999998777777777
Q ss_pred HccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHH
Q 001557 325 SGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 404 (1054)
Q Consensus 325 ~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~ 404 (1054)
++..++|+|+|.|++.+...... ......+.+..+ .++.+++.+|.|+++|+...+.+.+.|.+..+
T Consensus 102 ~~~~~~p~v~~~h~~~~~~~~~~--------~~~~~~~~~~~~--~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~--- 168 (388)
T TIGR02149 102 KKLYDKPLVVTAHSLEPLRPWKE--------EQLGGGYKLSSW--AEKTAIEAADRVIAVSGGMREDILKYYPDLDP--- 168 (388)
T ss_pred HHhcCCCEEEEeecccccccccc--------cccccchhHHHH--HHHHHHhhCCEEEEccHHHHHHHHHHcCCCCc---
Confidence 77789999999999754321000 000111222333 26678999999999999887777665543322
Q ss_pred HHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCC
Q 001557 405 RKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARP 484 (1054)
Q Consensus 405 ~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRl 484 (1054)
.++.+||||+|...|.+.. ....+.++..++++++|+++||+
T Consensus 169 ------------------~~i~vi~ng~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~i~~~Grl 210 (388)
T TIGR02149 169 ------------------EKVHVIYNGIDTKEYKPDD--------------------GNVVLDRYGIDRSRPYILFVGRI 210 (388)
T ss_pred ------------------ceEEEecCCCChhhcCCCc--------------------hHHHHHHhCCCCCceEEEEEccc
Confidence 2899999999998876421 11123344445678899999999
Q ss_pred CCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCC-CCEEe-CCCCCCCcHHHHHH
Q 001557 485 DPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLY-GQVAY-PKHHKQSDVPDIYR 562 (1054)
Q Consensus 485 d~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~-~~V~~-~g~~~~~dl~~ly~ 562 (1054)
.+.||++.+++|+.++. +...+ +++|++++. .++...+.+.+..++.. .+|.+ .+.++.+++..+|+
T Consensus 211 ~~~Kg~~~li~a~~~l~---~~~~l-~i~g~g~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 279 (388)
T TIGR02149 211 TRQKGVPHLLDAVHYIP---KDVQV-VLCAGAPDT-------PEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLS 279 (388)
T ss_pred ccccCHHHHHHHHHHHh---hcCcE-EEEeCCCCc-------HHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHH
Confidence 99999999999999884 23344 345555432 22345666777776652 33554 57889999999999
Q ss_pred HhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCH------HHHHHHHHHHHhCHHH
Q 001557 563 LAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ------QSIADALLKLVSDKQL 636 (1054)
Q Consensus 563 ~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~------~~la~aI~~ll~d~~~ 636 (1054)
.| |++|+||..|+||++++|||+||+|||+|+.||..|++.++.+|+++++.|+ ++++++|.+++++++.
T Consensus 280 ~a----Dv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~ 355 (388)
T TIGR02149 280 NA----EVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLADPEL 355 (388)
T ss_pred hC----CEEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhCHHH
Confidence 99 9999999999999999999999999999999999999999999999999998 9999999999999999
Q ss_pred HHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHh
Q 001557 637 WERCRQNGLKNI-HQFSWPEHCKSYLSRISSC 667 (1054)
Q Consensus 637 ~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~~~ 667 (1054)
++++++++++.+ ++|||+.++++|.++|+++
T Consensus 356 ~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 356 AKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 999999999998 7999999999999999875
No 22
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=4.2e-35 Score=351.41 Aligned_cols=444 Identities=19% Similarity=0.178 Sum_probs=280.5
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcc-cc--cccc-ccc
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPS-EM--LNRK-NTE 242 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~-~~--l~~~-~~~ 242 (1054)
||++||.... -...+||...++..|+++|+++ | |+|.|+++.+..-...+...... .. .... ...
T Consensus 1 ~Il~v~~E~~---------p~~k~GGl~~~~~~L~~aL~~~-G-~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (476)
T cd03791 1 KVLFVASEVA---------PFAKTGGLGDVVGALPKALAKL-G-HDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPE 69 (476)
T ss_pred CEEEEEcccc---------ccccCCcHHHHHHHHHHHHHHC-C-CeEEEEecCCcchhhHhccCeEEEEEEeeccCCcee
Confidence 5999998544 1357999999999999999999 8 99999997653211100000000 00 0000 000
Q ss_pred ccccccCCCCCeEEEEccCCCCCcccccc-----cCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCc
Q 001557 243 NLMQGLGESSGAYIIRIPFGPKDKYVQKE-----LLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADA 317 (1054)
Q Consensus 243 ~~~~~~~~~~g~~i~rip~g~~~~~l~k~-----~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a 317 (1054)
...-.....+|+.++++..... ..+. ...++.... ..+..+.......+... ..+|||||+|+|.+
T Consensus 70 ~~~~~~~~~~gv~~~~l~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~f~~~~~~~l~~~-----~~~pDviH~hd~~t 140 (476)
T cd03791 70 YVGVFELPVDGVPVYFLDNPDY---FDRPGLYDDSGYDYEDNA-ERFALFSRAALELLRRL-----GWKPDIIHCHDWHT 140 (476)
T ss_pred EEEEEEEEeCCceEEEEcChHH---cCCCCCCCccCCCCccHH-HHHHHHHHHHHHHHHhc-----CCCCcEEEECchHH
Confidence 0000112236888888865321 1111 112222111 11111111122222221 25699999999999
Q ss_pred hHHHHHHHcc------CCCCEEEEeCCCccchH---HHHHHhCCCC-hhhhhhHhHHHHHHHHHHhhhccCCEEEecCHH
Q 001557 318 GDAAALLSGA------LNVPMVFTGHSLGRDKL---EQLLKQGRLS-RDEINTTYKIMRRIEAEELSLDASEIVITSTRQ 387 (1054)
Q Consensus 318 ~~~a~~l~~~------~~iP~V~t~H~l~~~~~---~~l~~~g~~~-~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~ 387 (1054)
+.++.+++.. .++|+|+|+|++..... ..+...+... .......+.+...+..++.++..||.|+++|+.
T Consensus 141 ~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~ 220 (476)
T cd03791 141 GLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPT 220 (476)
T ss_pred HHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecCHh
Confidence 8888887765 48999999999865431 1111111000 000000001112233467789999999999998
Q ss_pred HHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCc-hhHHH
Q 001557 388 EIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPP-IWSEI 466 (1054)
Q Consensus 388 ~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 466 (1054)
..+++...+.+. +++..+.. ...++.+||||||.+.|.|........ .+.......... ....+
T Consensus 221 ~~~~i~~~~~~~--gl~~~~~~-----------~~~ki~~I~NGid~~~~~p~~~~~~~~--~~~~~~~~~~~~~k~~l~ 285 (476)
T cd03791 221 YAREILTPEFGE--GLDGLLRA-----------RAGKLSGILNGIDYDVWNPATDPHLPA--NYSADDLEGKAENKAALQ 285 (476)
T ss_pred HHHHhCCCCCCc--chHHHHHh-----------ccCCeEEEeCCCcCcccCccccchhhh--cCCccccccHHHHHHHHH
Confidence 887764432111 11111111 123899999999999998753211000 000000000001 11122
Q ss_pred hhhcC--CCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCC
Q 001557 467 MHFFS--NPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYG 544 (1054)
Q Consensus 467 ~~~~~--~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~ 544 (1054)
.++.. .++.++|+++||+.+.||++.+++|+..+.+. ..++ +++|.++. .+...+.+++.++ .+
T Consensus 286 ~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~l-vi~G~g~~---------~~~~~~~~~~~~~--~~ 351 (476)
T cd03791 286 EELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLEL--GGQL-VILGSGDP---------EYEEALRELAARY--PG 351 (476)
T ss_pred HHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHc--CcEE-EEEecCCH---------HHHHHHHHHHHhC--CC
Confidence 33333 36889999999999999999999999998642 2222 46787742 2345566666665 45
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCC------ceEEeCCC
Q 001557 545 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLD------NGLLVDPH 618 (1054)
Q Consensus 545 ~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~------~Gllv~p~ 618 (1054)
++.+.+..+.+++..+|+.| |++|+||..||||++++|||+||+|||+++.||..|+|.++. +|++++|.
T Consensus 352 ~v~~~~~~~~~~~~~~~~~a----Dv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~ 427 (476)
T cd03791 352 RVAVLIGYDEALAHLIYAGA----DFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGY 427 (476)
T ss_pred cEEEEEeCCHHHHHHHHHhC----CEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCC
Confidence 67766666667778999999 999999999999999999999999999999999999999887 99999999
Q ss_pred CHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 001557 619 DQQSIADALLKLVS---DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 619 d~~~la~aI~~ll~---d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~ 665 (1054)
|+++++++|.++++ +++.++++++++++ +.|||+..+++|+++|+
T Consensus 428 ~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 428 NADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYLELYR 475 (476)
T ss_pred CHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHHh
Confidence 99999999999886 67778777777654 47999999999999986
No 23
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=3.3e-34 Score=335.63 Aligned_cols=279 Identities=19% Similarity=0.257 Sum_probs=226.3
Q ss_pred CcceEEEEcCCCchHHHHHHHc--cCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEE
Q 001557 305 IWPVAIHGHYADAGDAAALLSG--ALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVI 382 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~--~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi 382 (1054)
..||+||+|++.++..+..++. .++.|.++|.|+....... . ...+.. ..+..++.+|.|+
T Consensus 117 ~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~-~-----------~~~~~~-----~~~~~~~~ad~vv 179 (406)
T PRK15427 117 FVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSRE-V-----------LNHYTP-----EYQQLFRRGDLML 179 (406)
T ss_pred CCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccch-h-----------hhhhhH-----HHHHHHHhCCEEE
Confidence 5699999999877777777765 4556789999975322110 0 001110 1233578999999
Q ss_pred ecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCch
Q 001557 383 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPI 462 (1054)
Q Consensus 383 ~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1054)
++|+...+.+.. + +..+ .++.+||||+|.+.|.+....
T Consensus 180 ~~S~~~~~~l~~-~-g~~~---------------------~ki~vi~nGvd~~~f~~~~~~------------------- 217 (406)
T PRK15427 180 PISDLWAGRLQK-M-GCPP---------------------EKIAVSRMGVDMTRFSPRPVK------------------- 217 (406)
T ss_pred ECCHHHHHHHHH-c-CCCH---------------------HHEEEcCCCCCHHHcCCCccc-------------------
Confidence 999977666533 2 1222 289999999999988643210
Q ss_pred hHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcC
Q 001557 463 WSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYD 541 (1054)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~ 541 (1054)
...+...|+++||+.+.||++.+++|+..+.+ ..+++.+ |+|+++. ...+.+++.+++
T Consensus 218 --------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~--~~~~~~l~ivG~G~~-----------~~~l~~~~~~~~ 276 (406)
T PRK15427 218 --------APATPLEIISVARLTEKKGLHVAIEACRQLKE--QGVAFRYRILGIGPW-----------ERRLRTLIEQYQ 276 (406)
T ss_pred --------cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHh--hCCCEEEEEEECchh-----------HHHHHHHHHHcC
Confidence 01344679999999999999999999999864 3345665 7888764 456788999999
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCC------CCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEe
Q 001557 542 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFI------EPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLV 615 (1054)
Q Consensus 542 l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~------Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv 615 (1054)
+.++|.|+|+++++++.++|+.| |+||+||.. ||||++++||||||+|||+|+.||.+|++.++.+|+++
T Consensus 277 l~~~V~~~G~~~~~el~~~l~~a----Dv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv 352 (406)
T PRK15427 277 LEDVVEMPGFKPSHEVKAMLDDA----DVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLV 352 (406)
T ss_pred CCCeEEEeCCCCHHHHHHHHHhC----CEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEe
Confidence 99999999999999999999999 999999974 99999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHh
Q 001557 616 DPHDQQSIADALLKLVS-DKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISSC 667 (1054)
Q Consensus 616 ~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~~~ 667 (1054)
+|.|+++++++|.++++ |+++++++++++++.+ ++|+|+..++++.++|+++
T Consensus 353 ~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~~ 406 (406)
T PRK15427 353 PENDAQALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQAL 406 (406)
T ss_pred CCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 99999999999999999 9999999999999999 7999999999999998753
No 24
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=5.9e-34 Score=330.43 Aligned_cols=367 Identities=22% Similarity=0.230 Sum_probs=265.8
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccc
Q 001557 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 245 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~ 245 (1054)
-+|++|..+ + ..||+++++.+|+++|.+. | +++.|++.... +.-..
T Consensus 2 ~~il~ii~~-~------------~~GG~e~~~~~l~~~l~~~-~-~~~~v~~~~~~--------~~~~~----------- 47 (374)
T TIGR03088 2 PLIVHVVYR-F------------DVGGLENGLVNLINHLPAD-R-YRHAVVALTEV--------SAFRK----------- 47 (374)
T ss_pred ceEEEEeCC-C------------CCCcHHHHHHHHHhhcccc-c-cceEEEEcCCC--------ChhHH-----------
Confidence 368888753 2 3499999999999999998 7 89988874311 10000
Q ss_pred cccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHH
Q 001557 246 QGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLS 325 (1054)
Q Consensus 246 ~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~ 325 (1054)
.....|+.+++++..+.. .+ .+ +..+.+.+.+ .+|||||+|... +..+..++
T Consensus 48 --~~~~~~i~~~~~~~~~~~-------~~----~~-------~~~l~~~l~~-------~~~Divh~~~~~-~~~~~~~~ 99 (374)
T TIGR03088 48 --RIQRPDVAFYALHKQPGK-------DV----AV-------YPQLYRLLRQ-------LRPDIVHTRNLA-ALEAQLPA 99 (374)
T ss_pred --HHHhcCceEEEeCCCCCC-------Ch----HH-------HHHHHHHHHH-------hCCCEEEEcchh-HHHHHHHH
Confidence 011237788877643220 00 11 1122222322 469999999753 33344455
Q ss_pred ccCCCCE-EEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHH
Q 001557 326 GALNVPM-VFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 404 (1054)
Q Consensus 326 ~~~~iP~-V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~ 404 (1054)
...++|. +++.|+....... + ....+++.+ +...+.+|.++++|+...+.+...+..
T Consensus 100 ~~~~~~~~i~~~h~~~~~~~~-----~------~~~~~~~~~-----~~~~~~~~~~i~vs~~~~~~~~~~~~~------ 157 (374)
T TIGR03088 100 ALAGVPARIHGEHGRDVFDLD-----G------SNWKYRWLR-----RLYRPLIHHYVAVSRDLEDWLRGPVKV------ 157 (374)
T ss_pred HhcCCCeEEEeecCcccccch-----h------hHHHHHHHH-----HHHHhcCCeEEEeCHHHHHHHHHhcCC------
Confidence 5567775 6677754221110 0 011222232 335567899999999877765443321
Q ss_pred HHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCC
Q 001557 405 RKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARP 484 (1054)
Q Consensus 405 ~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRl 484 (1054)
+..++.+||||+|.+.|.+..... ...........++++|+++||+
T Consensus 158 ----------------~~~~~~vi~ngvd~~~~~~~~~~~------------------~~~~~~~~~~~~~~~i~~vGrl 203 (374)
T TIGR03088 158 ----------------PPAKIHQIYNGVDTERFHPSRGDR------------------SPILPPDFFADESVVVGTVGRL 203 (374)
T ss_pred ----------------ChhhEEEeccCccccccCCCccch------------------hhhhHhhcCCCCCeEEEEEecC
Confidence 123899999999998886532110 0011122234567899999999
Q ss_pred CCCCCHHHHHHHHHhcccccCC--CcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHH
Q 001557 485 DPKKNITTLVKAFGECRPLREL--ANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIY 561 (1054)
Q Consensus 485 d~~Kgi~~ll~A~~~l~~~~~~--~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly 561 (1054)
.+.||++.+++|+..+....+. +++.| ++|+++. ...+.+.+..+++...+.|+|+ .+|+..+|
T Consensus 204 ~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~ 270 (374)
T TIGR03088 204 QAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGPA-----------RGACEQMVRAAGLAHLVWLPGE--RDDVPALM 270 (374)
T ss_pred CcccCHHHHHHHHHHHHHhCcccccceEEEEecCCch-----------HHHHHHHHHHcCCcceEEEcCC--cCCHHHHH
Confidence 9999999999999998654432 35665 7788764 3456788888999889999996 67999999
Q ss_pred HHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHH
Q 001557 562 RLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCR 641 (1054)
Q Consensus 562 ~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~ 641 (1054)
+.| |++|+||..||||++++|||+||+|||+|+.||..|++.++.+|+++++.|+++++++|.+++++++.+.+++
T Consensus 271 ~~a----di~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~ 346 (374)
T TIGR03088 271 QAL----DLFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSDPAARRAHG 346 (374)
T ss_pred Hhc----CEEEeccccccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHH
Confidence 999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH-hcCCHHHHHHHHHHHHHHh
Q 001557 642 QNGLKNI-HQFSWPEHCKSYLSRISSC 667 (1054)
Q Consensus 642 ~~~~~~v-~~fsw~~~a~~yl~~l~~~ 667 (1054)
+++++.+ ++|||+.++++|.++|.++
T Consensus 347 ~~a~~~~~~~fs~~~~~~~~~~~y~~~ 373 (374)
T TIGR03088 347 AAGRARAEQQFSINAMVAAYAGLYDQL 373 (374)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 9999998 7999999999999999875
No 25
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=3.1e-34 Score=331.42 Aligned_cols=366 Identities=22% Similarity=0.325 Sum_probs=263.6
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccc
Q 001557 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 245 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~ 245 (1054)
|||++++. |..||.++++.+|+++|++. | |+|+|+|... +. ...
T Consensus 1 mki~~~~~--------------p~~gG~~~~~~~la~~L~~~-G-~~v~v~~~~~--~~-----~~~------------- 44 (371)
T cd04962 1 MKIGIVCY--------------PTYGGSGVVATELGKALARR-G-HEVHFITSSR--PF-----RLD------------- 44 (371)
T ss_pred CceeEEEE--------------eCCCCccchHHHHHHHHHhc-C-CceEEEecCC--Cc-----chh-------------
Confidence 78999974 45699999999999999999 8 9999998642 10 000
Q ss_pred cccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHH-
Q 001557 246 QGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALL- 324 (1054)
Q Consensus 246 ~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l- 324 (1054)
...+++.+..++.... +......+. ......+.+.+.+ .+||+||+|++.....+..+
T Consensus 45 ---~~~~~~~~~~~~~~~~----~~~~~~~~~-------~~~~~~l~~~i~~-------~~~divh~~~~~~~~~~~~~~ 103 (371)
T cd04962 45 ---EYSPNIFFHEVEVPQY----PLFQYPPYD-------LALASKIAEVAKR-------YKLDLLHVHYAVPHAVAAYLA 103 (371)
T ss_pred ---hhccCeEEEEeccccc----chhhcchhH-------HHHHHHHHHHHhc-------CCccEEeecccCCccHHHHHH
Confidence 0112444444332111 000000110 1111112222222 56999999986433222222
Q ss_pred ---HccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCCh
Q 001557 325 ---SGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP 401 (1054)
Q Consensus 325 ---~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~ 401 (1054)
.+..++|+|++.|+...... +. . ..+ ++ .++.+++.+|.|+++|+...+.+.+.|..
T Consensus 104 ~~~~~~~~~~~i~~~h~~~~~~~------~~-~-----~~~---~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~~--- 163 (371)
T cd04962 104 REILGKKDLPVVTTLHGTDITLV------GQ-D-----PSF---QP--ATRFSIEKSDGVTAVSESLRQETYELFDI--- 163 (371)
T ss_pred HHhcCcCCCcEEEEEcCCccccc------cc-c-----ccc---hH--HHHHHHhhCCEEEEcCHHHHHHHHHhcCC---
Confidence 22248999999997633211 00 0 011 11 13456889999999999877765544321
Q ss_pred HHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEE
Q 001557 402 VLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILAL 481 (1054)
Q Consensus 402 ~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~v 481 (1054)
..++.+||||+|...|.+.... ....++...++.++|+++
T Consensus 164 --------------------~~~i~vi~n~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~il~~ 203 (371)
T cd04962 164 --------------------TKEIEVIPNFVDEDRFRPKPDE--------------------ALKRRLGAPEGEKVLIHI 203 (371)
T ss_pred --------------------cCCEEEecCCcCHhhcCCCchH--------------------HHHHhcCCCCCCeEEEEe
Confidence 1279999999998777542110 112234445678899999
Q ss_pred eCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHH
Q 001557 482 ARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIY 561 (1054)
Q Consensus 482 gRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly 561 (1054)
||+.+.||++.+++|+..+... ....+ +++|.+++ ...+.+++.++++.++|.|+|.. +++..+|
T Consensus 204 g~l~~~K~~~~li~a~~~l~~~-~~~~l-~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~ 268 (371)
T cd04962 204 SNFRPVKRIDDVIRIFAKVRKE-VPARL-LLVGDGPE-----------RSPAERLARELGLQDDVLFLGKQ--DHVEELL 268 (371)
T ss_pred cccccccCHHHHHHHHHHHHhc-CCceE-EEEcCCcC-----------HHHHHHHHHHcCCCceEEEecCc--ccHHHHH
Confidence 9999999999999999988532 22222 47788765 24466778888888899999974 6899999
Q ss_pred HHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHH
Q 001557 562 RLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCR 641 (1054)
Q Consensus 562 ~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~ 641 (1054)
+.| |++|+||..|+||++++|||+||+|||+|+.|+..|++.++.+|++++++|+++++++|.+++++++.+.+++
T Consensus 269 ~~~----d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~~~~~~~~ 344 (371)
T cd04962 269 SIA----DLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDDELWQEFS 344 (371)
T ss_pred Hhc----CEEEeCCCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHH
Confidence 999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH-hcCCHHHHHHHHHHHHHHh
Q 001557 642 QNGLKNI-HQFSWPEHCKSYLSRISSC 667 (1054)
Q Consensus 642 ~~~~~~v-~~fsw~~~a~~yl~~l~~~ 667 (1054)
+++++.+ ++|||+.++++|.+.|+++
T Consensus 345 ~~~~~~~~~~fs~~~~~~~~~~~y~~~ 371 (371)
T cd04962 345 RAARNRAAERFDSERIVPQYEALYRRL 371 (371)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 9999997 7999999999999999753
No 26
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=5.8e-34 Score=333.46 Aligned_cols=375 Identities=18% Similarity=0.184 Sum_probs=253.0
Q ss_pred HHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCcccccccCCCC
Q 001557 197 VVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPH 276 (1054)
Q Consensus 197 v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~ 276 (1054)
..+||++|+++ | |+|+++|.... +. ...|+++++++.++.. .+ ..++|
T Consensus 13 ~~~la~~L~~~-G-~~v~~~~~~~~-~~-------------------------~~~~v~~~~~~~~~~~---~~-~~~~~ 60 (396)
T cd03818 13 FRHLAPALAAQ-G-HEVVFLTEPNA-AP-------------------------PPGGVRVVRYRPPRGP---TS-GTHPY 60 (396)
T ss_pred HHHHHHHHHHC-C-CEEEEEecCCC-CC-------------------------CCCCeeEEEecCCCCC---CC-CCCcc
Confidence 35699999999 8 99999997621 00 0016899998876542 12 56777
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHc-cCCCCEEEEeCCCccchHHHHHHhCCCCh
Q 001557 277 IPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSG-ALNVPMVFTGHSLGRDKLEQLLKQGRLSR 355 (1054)
Q Consensus 277 l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~-~~~iP~V~t~H~l~~~~~~~l~~~g~~~~ 355 (1054)
...+...+..... +.+.+.... .+..+|||||+|.... . +..+.. ..++|+|.+.|-+....... .+ +..
T Consensus 61 ~~~~~~~~~~~~~-~~~~~~~~~--~~~~~pdvi~~h~~~~-~-~~~l~~~~~~~~~v~~~~~~~~~~~~~---~~-~~~ 131 (396)
T cd03818 61 LREFEEAVLRGQA-VARALLALR--AKGFRPDVIVAHPGWG-E-TLFLKDVWPDAPLIGYFEFYYRAEGAD---VG-FDP 131 (396)
T ss_pred chhHHHHHHHHHH-HHHHHHHHH--hcCCCCCEEEECCccc-h-hhhHHHhCCCCCEEEEEeeeecCCCCC---CC-CCC
Confidence 7777554443222 222222221 1236799999997432 1 122332 34689998776433221000 00 000
Q ss_pred hhhhh---HhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCC
Q 001557 356 DEINT---TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGI 432 (1054)
Q Consensus 356 ~~i~~---~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGI 432 (1054)
..... ..++..+.......++.+|.||++|+...+.+...+. .++.|||||+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~-------------------------~ki~vI~ngv 186 (396)
T cd03818 132 EFPPSLDDALRLRNRNALILLALAQADAGVSPTRWQRSTFPAELR-------------------------SRISVIHDGI 186 (396)
T ss_pred CCCCchhHHHHHHHhhhHhHHHHHhCCEEECCCHHHHhhCcHhhc-------------------------cceEEeCCCc
Confidence 00000 1111111112446799999999999987665433221 2899999999
Q ss_pred cCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeC-CCCCCCHHHHHHHHHhcccccCCCcEEE
Q 001557 433 EFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALAR-PDPKKNITTLVKAFGECRPLRELANLTL 511 (1054)
Q Consensus 433 D~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgR-ld~~Kgi~~ll~A~~~l~~~~~~~~l~L 511 (1054)
|.+.|.|...... .........++.++|+++|| +.+.||++.+++|+..+.+.. +++.+
T Consensus 187 d~~~f~~~~~~~~------------------~~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~--~~~~l 246 (396)
T cd03818 187 DTDRLRPDPQARL------------------RLPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRAR--PDARV 246 (396)
T ss_pred cccccCCCchhhh------------------cccccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHHC--CCcEE
Confidence 9999876431100 00000112356789999998 999999999999999986433 45554
Q ss_pred -EEecCC-CchhhhhchHHHHHHHHHHHH-HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHH
Q 001557 512 -IMGNRD-DIDEMSGTNAALLLSILKLID-KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAA 588 (1054)
Q Consensus 512 -IiG~~~-~~~~~~~~~~~~~~~i~~l~~-~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAm 588 (1054)
|+|++. .+.........+...+.+... +++ .++|.|+|+++.++++.+|+.| |++|+||..|++|++++|||
T Consensus 247 vivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~V~f~G~v~~~~~~~~l~~a----dv~v~~s~~e~~~~~llEAm 321 (396)
T cd03818 247 VIVGGDGVSYGAPPPDGESWKQHMLDELGGRLD-LSRVHFLGRVPYDQYLALLQVS----DVHVYLTYPFVLSWSLLEAM 321 (396)
T ss_pred EEEcCCCcccCCCCCCcccHHHHHHHHhhcccC-cceEEEeCCCCHHHHHHHHHhC----cEEEEcCcccccchHHHHHH
Confidence 666532 111111101112222222222 222 3689999999999999999999 99999999999999999999
Q ss_pred HcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHH
Q 001557 589 AYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLS 662 (1054)
Q Consensus 589 A~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~ 662 (1054)
|||+|||+|+.||..|++.++.+|++++|.|+++++++|.+++++++.+.++++++++.+ ++|||+.++++|++
T Consensus 322 A~G~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 322 ACGCLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLDDPARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred HCCCCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999 57999999999863
No 27
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=7.1e-33 Score=323.07 Aligned_cols=387 Identities=20% Similarity=0.222 Sum_probs=264.5
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccc
Q 001557 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 245 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~ 245 (1054)
|||+++.+. + ..||.++++.+||++|++. | |+|+|+|.... .. ..+.
T Consensus 1 mkIl~~~~~-~------------~~gG~e~~~~~la~~L~~~-G-~~V~v~~~~~~--~~-~~~~--------------- 47 (392)
T cd03805 1 LRVAFIHPD-L------------GIGGAERLVVDAALALQSR-G-HEVTIYTSHHD--PS-HCFE--------------- 47 (392)
T ss_pred CeEEEECCC-C------------CCchHHHHHHHHHHHHHhC-C-CeEEEEcCCCC--ch-hcch---------------
Confidence 799999752 2 2589999999999999999 8 99999996421 00 0000
Q ss_pred cccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHH
Q 001557 246 QGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLS 325 (1054)
Q Consensus 246 ~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~ 325 (1054)
+. ...++.+..++.. .++. ++.....+ ..++......+...+. ...+|||||+|....+.....
T Consensus 48 -~~-~~~~~~i~~~~~~-----~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~Dvi~~~~~~~~~~~~~-- 111 (392)
T cd03805 48 -ET-KDGTLPVRVRGDW-----LPRS-IFGRFHIL----CAYLRMLYLALYLLLL--PDEKYDVFIVDQVSACVPLLK-- 111 (392)
T ss_pred -hc-cCCeeEEEEEeEE-----Ecch-hhHhHHHH----HHHHHHHHHHHHHHhc--ccCCCCEEEEcCcchHHHHHH--
Confidence 00 0112444443211 1111 11111111 1111111111100011 124699999997654433222
Q ss_pred ccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhH-HHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHH
Q 001557 326 GALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYK-IMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 404 (1054)
Q Consensus 326 ~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~-~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~ 404 (1054)
...+.|+|++.|.. +... .. . ...+...++ +.++ .|+++++.+|.|+++|+...+.+...|+....
T Consensus 112 ~~~~~~~i~~~h~~--~~~~---~~-~--~~~~~~~~~~~~~~--~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~--- 178 (392)
T cd03805 112 LFSPSKILFYCHFP--DQLL---AQ-R--GSLLKRLYRKPFDW--LEEFTTGMADKIVVNSNFTASVFKKTFPSLAK--- 178 (392)
T ss_pred HhcCCcEEEEEecC--hHHh---cC-C--CcHHHHHHHHHHHH--HHHHHhhCceEEEEcChhHHHHHHHHhccccc---
Confidence 22248999999932 2210 00 0 001111221 2223 37788999999999999887766555543211
Q ss_pred HHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCC
Q 001557 405 RKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARP 484 (1054)
Q Consensus 405 ~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRl 484 (1054)
..+.|||||+|.+.|.+..... ........++.++|+++||+
T Consensus 179 ------------------~~~~vi~n~vd~~~~~~~~~~~--------------------~~~~~~~~~~~~~i~~~grl 220 (392)
T cd03805 179 ------------------NPREVVYPCVDTDSFESTSEDP--------------------DPGLLIPKSGKKTFLSINRF 220 (392)
T ss_pred ------------------CCcceeCCCcCHHHcCcccccc--------------------cccccccCCCceEEEEEeee
Confidence 1346999999998887532110 00112234677899999999
Q ss_pred CCCCCHHHHHHHHHhcccccC-CCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHH-cCCCCCEEeCCCCCCCcHHHHH
Q 001557 485 DPKKNITTLVKAFGECRPLRE-LANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDK-YDLYGQVAYPKHHKQSDVPDIY 561 (1054)
Q Consensus 485 d~~Kgi~~ll~A~~~l~~~~~-~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~-~~l~~~V~~~g~~~~~dl~~ly 561 (1054)
.+.||++.+++|+.++....+ .+++.| ++|+++.. .....++...+.+++++ +++.++|.|+|+++.+++..+|
T Consensus 221 ~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~---~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~~~~~~l 297 (392)
T cd03805 221 ERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPR---VAENVEYLEELQRLAEELLLLEDQVIFLPSISDSQKELLL 297 (392)
T ss_pred cccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCC---CchhHHHHHHHHHHHHHhcCCCceEEEeCCCChHHHHHHH
Confidence 999999999999999864321 145555 67776531 11234567788899999 8999999999999999999999
Q ss_pred HHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHH
Q 001557 562 RLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCR 641 (1054)
Q Consensus 562 ~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~ 641 (1054)
+.| |++|+||..|+||++++||||||+|||+++.||..|++.++.+|+++++ |+++++++|.+++++++.+++++
T Consensus 298 ~~a----d~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~~~~~~~~ 372 (392)
T cd03805 298 SSA----RALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDPDLADRMG 372 (392)
T ss_pred hhC----eEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhChHHHHHHH
Confidence 999 9999999999999999999999999999999999999999889999976 99999999999999999999999
Q ss_pred HHHHHHH-hcCCHHHHHHHH
Q 001557 642 QNGLKNI-HQFSWPEHCKSY 660 (1054)
Q Consensus 642 ~~~~~~v-~~fsw~~~a~~y 660 (1054)
+++++.+ ++|||+.++++|
T Consensus 373 ~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 373 AAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred HHHHHHHHHhcCHHHHhhhC
Confidence 9999998 799999998764
No 28
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=2.1e-32 Score=318.21 Aligned_cols=368 Identities=17% Similarity=0.215 Sum_probs=260.3
Q ss_pred EEEEEecccccccCCcCCCCCC-CCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccc
Q 001557 167 YIVLISLHGLIRGENMELGRDS-DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 245 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~-~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~ 245 (1054)
||+++++--+ +-+| ..||+++++.++++.|+ ++|+++|.... ++.. .+
T Consensus 4 ~~~~~~~~~~--------~~p~~~~g~ve~~~~~~~~~l~-----~~~~~~~~~~~------~~~~-~~----------- 52 (380)
T PRK15484 4 KIIFTVTPIF--------SIPPRGAAAVETWIYQVAKRTS-----IPNRIACIKNP------GYPE-YT----------- 52 (380)
T ss_pred eEEEEeccCC--------CCCCccccHHHHHHHHhhhhcc-----CCeeEEEecCC------CCCc-hh-----------
Confidence 7888876433 2223 46999999999999993 47999997631 1111 00
Q ss_pred cccCCCCCeEEEEccCCCCCcccccccCCCCh--HHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHH
Q 001557 246 QGLGESSGAYIIRIPFGPKDKYVQKELLWPHI--PEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAAL 323 (1054)
Q Consensus 246 ~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l--~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~ 323 (1054)
...+|+.++++++... |......|..+ ..+...++..+. . .....+||||+|... .+...+
T Consensus 53 ---~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-------~----~~~~~~~vi~v~~~~-~~~~~~ 115 (380)
T PRK15484 53 ---KVNDNCDIHYIGFSRI--YKRLFQKWTRLDPLPYSQRILNIAH-------K----FTITKDSVIVIHNSM-KLYRQI 115 (380)
T ss_pred ---hccCCCceEEEEeccc--cchhhhhhhccCchhHHHHHHHHHH-------h----cCCCCCcEEEEeCcH-HhHHHH
Confidence 1124677777765321 10000011000 011111111111 1 111459999999853 344444
Q ss_pred HHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHH
Q 001557 324 LSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVL 403 (1054)
Q Consensus 324 l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l 403 (1054)
..+..++|+|++.|+.+... .+..++.|+++|+...+.+...++.
T Consensus 116 ~~~~~~~~~v~~~h~~~~~~------------------------------~~~~~~~ii~~S~~~~~~~~~~~~~----- 160 (380)
T PRK15484 116 RERAPQAKLVMHMHNAFEPE------------------------------LLDKNAKIIVPSQFLKKFYEERLPN----- 160 (380)
T ss_pred HhhCCCCCEEEEEecccChh------------------------------HhccCCEEEEcCHHHHHHHHhhCCC-----
Confidence 55567899999999753111 1346789999998776654433221
Q ss_pred HHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeC
Q 001557 404 ERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALAR 483 (1054)
Q Consensus 404 ~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgR 483 (1054)
.++.+||||+|...|.+... .....++...++.++|+++||
T Consensus 161 -------------------~~i~vIpngvd~~~~~~~~~--------------------~~~~~~~~~~~~~~~il~~Gr 201 (380)
T PRK15484 161 -------------------ADISIVPNGFCLETYQSNPQ--------------------PNLRQQLNISPDETVLLYAGR 201 (380)
T ss_pred -------------------CCEEEecCCCCHHHcCCcch--------------------HHHHHHhCCCCCCeEEEEecc
Confidence 27999999999887764210 011223333456789999999
Q ss_pred CCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHH
Q 001557 484 PDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYR 562 (1054)
Q Consensus 484 ld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~ 562 (1054)
+.+.||++.+++|+..+.+ ..+++.| |+|+++.... .+...+...+.+++..++ .+|.|.|+++.+++..+|+
T Consensus 202 l~~~Kg~~~Li~A~~~l~~--~~p~~~lvivG~g~~~~~--~~~~~~~~~l~~~~~~l~--~~v~~~G~~~~~~l~~~~~ 275 (380)
T PRK15484 202 ISPDKGILLLMQAFEKLAT--AHSNLKLVVVGDPTASSK--GEKAAYQKKVLEAAKRIG--DRCIMLGGQPPEKMHNYYP 275 (380)
T ss_pred CccccCHHHHHHHHHHHHH--hCCCeEEEEEeCCccccc--cchhHHHHHHHHHHHhcC--CcEEEeCCCCHHHHHHHHH
Confidence 9999999999999999864 3455655 6787653211 122345667777777766 5789999999999999999
Q ss_pred HhhcCCcEEEecCC-CCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceE-EeCCCCHHHHHHHHHHHHhCHHHHHHH
Q 001557 563 LAAKTKGVFINPAF-IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGL-LVDPHDQQSIADALLKLVSDKQLWERC 640 (1054)
Q Consensus 563 ~Aa~~~dv~v~ps~-~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gl-lv~p~d~~~la~aI~~ll~d~~~~~~~ 640 (1054)
.| |++|+||. .|+||++++||||||+|||+|+.||.+|++.++.+|+ +++|.|+++++++|.++++|++. .++
T Consensus 276 ~a----Dv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~~-~~~ 350 (380)
T PRK15484 276 LA----DLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPEL-TQI 350 (380)
T ss_pred hC----CEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHHH-HHH
Confidence 99 99999997 5999999999999999999999999999999999998 66899999999999999999985 679
Q ss_pred HHHHHHHH-hcCCHHHHHHHHHHHHHHh
Q 001557 641 RQNGLKNI-HQFSWPEHCKSYLSRISSC 667 (1054)
Q Consensus 641 ~~~~~~~v-~~fsw~~~a~~yl~~l~~~ 667 (1054)
++++++.+ ++|||+.++++|++.|+..
T Consensus 351 ~~~ar~~~~~~fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 351 AEQAKDFVFSKYSWEGVTQRFEEQIHNW 378 (380)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 99999988 7999999999999999754
No 29
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=2.1e-32 Score=333.16 Aligned_cols=391 Identities=15% Similarity=0.097 Sum_probs=261.1
Q ss_pred Ccce-EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCc-------------eEEEEEecCcCCCCCCCc
Q 001557 163 EKKL-YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGV-------------YRVDLLTRQVSAPDVDWT 228 (1054)
Q Consensus 163 ~~~m-kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv-------------~~V~vvt~~~~~p~~~~~ 228 (1054)
.++. ||++|.. ++ ..||+++++..|+.+|.++ +. ..|.+++.... +..
T Consensus 278 ~~~~~rIl~vi~-sl------------~~GGAEr~~~~La~~l~~~-~~~~~~~~g~g~~~~~~V~~~~~~~~-~g~--- 339 (694)
T PRK15179 278 ESFVGPVLMING-SL------------GAGGAERQFVNTAVALQSA-IQQGQSIAGYGVLGPVQVVCRSLRSR-EGA--- 339 (694)
T ss_pred CCCcceEEEEeC-CC------------CCCcHHHHHHHHHHHHHhc-ccCcccccCccCCCCcEEEEEecccc-cCc---
Confidence 4566 8999975 32 3489999999999999998 31 13444432100 000
Q ss_pred cCCcccccccccccccccccCCCCCeEEEEccCCCCCccccccc-CCCChHHH----HHHHHHHHHHHHHHHhhhhcCCC
Q 001557 229 YAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKEL-LWPHIPEF----VDAALTHIIQISKVLGEQVGSGQ 303 (1054)
Q Consensus 229 ~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~k~~-l~~~l~~f----~~~~l~~i~~~~k~L~~~~~~~~ 303 (1054)
+.....+ ...|+.+..++..+. ....... ....+..+ .......+..+.+.+.+
T Consensus 340 -~~~~~~L-------------~~~Gv~v~~l~~~~~-~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~------ 398 (694)
T PRK15179 340 -DFFAATL-------------ADAGIPVSVYSDMQA-WGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRS------ 398 (694)
T ss_pred -chHHHHH-------------HhCCCeEEEeccCCc-cCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHH------
Confidence 0000001 124888888765432 1111000 00111110 01122223333333333
Q ss_pred CCcceEEEEcCCCchHHHHHHHccCCCCEEE-EeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEE
Q 001557 304 PIWPVAIHGHYADAGDAAALLSGALNVPMVF-TGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVI 382 (1054)
Q Consensus 304 ~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~-t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi 382 (1054)
.+|||||+|...+..++.+.++..++|+|+ +.|++........ ....+.... .......++.++
T Consensus 399 -~kpDIVH~h~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~~~~----------~~~~~~~l~----~~l~~~~~~i~V 463 (694)
T PRK15179 399 -SVPSVVHIWQDGSIFACALAALLAGVPRIVLSVRTMPPVDRPDR----------YRVEYDIIY----SELLKMRGVALS 463 (694)
T ss_pred -cCCcEEEEeCCcHHHHHHHHHHHcCCCEEEEEeCCCccccchhH----------HHHHHHHHH----HHHHhcCCeEEE
Confidence 569999999987777778888778999977 5676532211100 001111111 111222345667
Q ss_pred ecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCch
Q 001557 383 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPI 462 (1054)
Q Consensus 383 ~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1054)
+.|....+.+...++ .+..++.|||||||...|.+..... ..
T Consensus 464 s~S~~~~~~l~~~~g----------------------~~~~kI~VI~NGVd~~~f~~~~~~~----------------~~ 505 (694)
T PRK15179 464 SNSQFAAHRYADWLG----------------------VDERRIPVVYNGLAPLKSVQDDACT----------------AM 505 (694)
T ss_pred eCcHHHHHHHHHHcC----------------------CChhHEEEECCCcCHHhcCCCchhh----------------HH
Confidence 777766555433332 1223899999999988876421100 00
Q ss_pred hHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcC
Q 001557 463 WSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYD 541 (1054)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~ 541 (1054)
+... +...+.+.++|+++||+.+.||++.+|+|+..+.+. .+++.| |+|+++. ...+.+++.+++
T Consensus 506 ~~~~-~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~--~p~~~LvIvG~G~~-----------~~~L~~l~~~lg 571 (694)
T PRK15179 506 MAQF-DARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAAS--HPKVRFIMVGGGPL-----------LESVREFAQRLG 571 (694)
T ss_pred HHhh-ccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHH--CcCeEEEEEccCcc-----------hHHHHHHHHHcC
Confidence 0000 111234567899999999999999999999988643 345555 7788764 356788999999
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCH-
Q 001557 542 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ- 620 (1054)
Q Consensus 542 l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~- 620 (1054)
+.++|.|+|+. ++++.+|+.| |+||+||.+|+||++++||||||+|||+|+.||+.|+|.++.+|++|+|+|+
T Consensus 572 L~~~V~flG~~--~dv~~ll~aa----Dv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~ 645 (694)
T PRK15179 572 MGERILFTGLS--RRVGYWLTQF----NAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVT 645 (694)
T ss_pred CCCcEEEcCCc--chHHHHHHhc----CEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCC
Confidence 99999999995 5899999999 9999999999999999999999999999999999999999999999998774
Q ss_pred -HHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 001557 621 -QSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 621 -~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~ 665 (1054)
++++++|.+++.+......+++++++.+ ++|||+.++++|+++|+
T Consensus 646 ~~~La~aL~~ll~~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 646 APDVAEALARIHDMCAADPGIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred hHHHHHHHHHHHhChhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 6899999998887666667888999998 69999999999999985
No 30
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=100.00 E-value=3.3e-34 Score=311.90 Aligned_cols=243 Identities=24% Similarity=0.349 Sum_probs=185.8
Q ss_pred CEEEEEEecCCCC---hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcC
Q 001557 769 KYVFVIAADCDTT---SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 845 (1054)
Q Consensus 769 kkLiv~DiDGTL~---~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~ 845 (1054)
++||++|+||||. ......+.+.++...+ +++.|+++|||++.++.+++++.++ +.||++||++|++||+.
T Consensus 2 ~~ll~sDlD~Tl~~~~~~~~~~l~~~l~~~~~----~~~~~v~~TGRs~~~~~~~~~~~~l--~~Pd~~I~svGt~I~~~ 75 (247)
T PF05116_consen 2 PRLLASDLDGTLIDGDDEALARLEELLEQQAR----PEILFVYVTGRSLESVLRLLREYNL--PQPDYIITSVGTEIYYG 75 (247)
T ss_dssp SEEEEEETBTTTBHCHHHHHHHHHHHHHHHHC----CGEEEEEE-SS-HHHHHHHHHHCT---EE-SEEEETTTTEEEES
T ss_pred CEEEEEECCCCCcCCCHHHHHHHHHHHHHhhC----CCceEEEECCCCHHHHHHHHHhCCC--CCCCEEEecCCeEEEEc
Confidence 5999999999995 3445566666662223 5899999999999999999999998 46999999999999995
Q ss_pred CCCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEecCCCCCccHHH
Q 001557 846 SSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIPPVKE 925 (1054)
Q Consensus 846 ~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~~~~~~~~~e 925 (1054)
. .+.+|..|..++...|..+.+++++.++++...+. ...+..||++|++........+++
T Consensus 76 ~---------~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l~~q~-----------~~~q~~~k~sy~~~~~~~~~~~~~ 135 (247)
T PF05116_consen 76 E---------NWQPDEEWQAHIDERWDRERVEEILAELPGLRPQP-----------ESEQRPFKISYYVDPDDSADILEE 135 (247)
T ss_dssp S---------TTEE-HHHHHHHHTT--HHHHHHHHHCHCCEEEGG-----------CCCGCCTCECEEEETTSHCHHHHH
T ss_pred C---------CCcChHHHHHHHHhcCChHHHHHHHHHhhCcccCC-----------ccccCCeeEEEEEecccchhHHHH
Confidence 3 57789999999999999999999988887654433 356778999999976554444789
Q ss_pred HHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEecCcch
Q 001557 926 LRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGE 1005 (1054)
Q Consensus 926 l~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMgNa~~ 1005 (1054)
|++.+++.+.++++++|++. ++||+|+++|||.||+||+++|+++++++++ +||++| | ++||.....||+|+||.
T Consensus 136 i~~~l~~~~l~~~~i~s~~~-~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~-aGDSgN-D-~~mL~~~~~~vvV~Na~- 210 (247)
T PF05116_consen 136 IRARLRQRGLRVNVIYSNGR-DLDILPKGASKGAALRYLMERWGIPPEQVLV-AGDSGN-D-LEMLEGGDHGVVVGNAQ- 210 (247)
T ss_dssp HHHHHHCCTCEEEEEECTCC-EEEEEETT-SHHHHHHHHHHHHT--GGGEEE-EESSGG-G-HHHHCCSSEEEE-TTS--
T ss_pred HHHHHHHcCCCeeEEEccce-eEEEccCCCCHHHHHHHHHHHhCCCHHHEEE-EeCCCC-c-HHHHcCcCCEEEEcCCC-
Confidence 99999999999999999885 9999999999999999999999999999999 899999 9 99999999999999999
Q ss_pred hHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHHHHhcc
Q 001557 1006 SARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGV 1050 (1054)
Q Consensus 1006 ~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al~~~~~ 1050 (1054)
.+++.+...- ....++++++ ....++||.+||+||||
T Consensus 211 -~e~~~~~~~~------~~~~~~iy~a-~~~~a~GIlegl~~~~~ 247 (247)
T PF05116_consen 211 -PELLSWLLEK------LRQQERIYFA-QGPYAAGILEGLQHFGF 247 (247)
T ss_dssp -HHHHHHHHHC------C-TTE--EE--SS-THHHHHHHHHHTTT
T ss_pred -HHHHHHHHHh------cccCCceEec-CCCCcHHHHHHHHHcCC
Confidence 3322211100 1123355555 56679999999999996
No 31
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=8.2e-32 Score=309.62 Aligned_cols=360 Identities=20% Similarity=0.233 Sum_probs=255.9
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccccccc
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 246 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 246 (1054)
||++|+.+++ +|..||+++++.+|+++|.++ | |+|+|+|.....+. .
T Consensus 1 ~i~~i~~~~~----------~~~~gG~~~~~~~la~~L~~~-g-~~v~v~~~~~~~~~-------~-------------- 47 (363)
T cd04955 1 KIAIIGTRGI----------PAKYGGFETFVEELAPRLVAR-G-HEVTVYCRSPYPKQ-------K-------------- 47 (363)
T ss_pred CeEEEecCcC----------CcccCcHHHHHHHHHHHHHhc-C-CCEEEEEccCCCCC-------c--------------
Confidence 6899988776 467899999999999999999 8 99999997531110 0
Q ss_pred ccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHc
Q 001557 247 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSG 326 (1054)
Q Consensus 247 ~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~ 326 (1054)
.....|+.++++|..... . +..+ ...+..+.+.+.. ..++|+||...... ..+..+.+
T Consensus 48 -~~~~~~i~~~~~~~~~~~-~---------~~~~----~~~~~~~~~~~~~------~~~~~~i~~~~~~~-~~~~~~~~ 105 (363)
T cd04955 48 -ETEYNGVRLIHIPAPEIG-G---------LGTI----IYDILAILHALFV------KRDIDHVHALGPAI-APFLPLLR 105 (363)
T ss_pred -ccccCCceEEEcCCCCcc-c---------hhhh----HHHHHHHHHHHhc------cCCeEEEEecCccH-HHHHHHHH
Confidence 012358888888754310 0 0001 1111111111111 13466776665444 33334445
Q ss_pred cCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHH
Q 001557 327 ALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK 406 (1054)
Q Consensus 327 ~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~ 406 (1054)
..++|+|++.|+....... + +. ....+.+. .|+.+++.+|.|+++|+...+.+...|+.
T Consensus 106 ~~~~~~v~~~h~~~~~~~~-~---~~-------~~~~~~~~--~~~~~~~~ad~ii~~s~~~~~~~~~~~~~-------- 164 (363)
T cd04955 106 LKGKKVVVNMDGLEWKRAK-W---GR-------PAKRYLKF--GEKLAVKFADRLIADSPGIKEYLKEKYGR-------- 164 (363)
T ss_pred hcCCCEEEEccCcceeecc-c---cc-------chhHHHHH--HHHHHHhhccEEEeCCHHHHHHHHHhcCC--------
Confidence 5699999999987432210 0 00 01122222 35667899999999999887776454432
Q ss_pred HHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCC
Q 001557 407 LRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDP 486 (1054)
Q Consensus 407 l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~ 486 (1054)
+..+||||+|...+.+.. ....... .++.+.|+++||+.+
T Consensus 165 -----------------~~~~i~ngv~~~~~~~~~----------------------~~~~~~~-~~~~~~i~~~G~~~~ 204 (363)
T cd04955 165 -----------------DSTYIPYGADHVVSSEED----------------------EILKKYG-LEPGRYYLLVGRIVP 204 (363)
T ss_pred -----------------CCeeeCCCcChhhcchhh----------------------hhHHhcC-CCCCcEEEEEecccc
Confidence 338999999987665300 0011111 234567899999999
Q ss_pred CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHH-HcCCCCCEEeCCCCCCCcHHHHHHHhh
Q 001557 487 KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLID-KYDLYGQVAYPKHHKQSDVPDIYRLAA 565 (1054)
Q Consensus 487 ~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~-~~~l~~~V~~~g~~~~~dl~~ly~~Aa 565 (1054)
.||++.+++|+..+.. ...+ +++|+++.... +.+.+. .++..++|.|+|+++.+++..+|+.|
T Consensus 205 ~Kg~~~li~a~~~l~~---~~~l-~ivG~~~~~~~-----------~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~a- 268 (363)
T cd04955 205 ENNIDDLIEAFSKSNS---GKKL-VIVGNADHNTP-----------YGKLLKEKAAADPRIIFVGPIYDQELLELLRYA- 268 (363)
T ss_pred cCCHHHHHHHHHhhcc---CceE-EEEcCCCCcch-----------HHHHHHHHhCCCCcEEEccccChHHHHHHHHhC-
Confidence 9999999999998842 2233 47788754222 222222 56777899999999999999999999
Q ss_pred cCCcEEEecCCC-CCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Q 001557 566 KTKGVFINPAFI-EPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNG 644 (1054)
Q Consensus 566 ~~~dv~v~ps~~-Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~ 644 (1054)
|++++||.. |+||++++||||||+|||+|+.|+..|++.+ +|+++++.|. ++++|.+++++++.+.++++++
T Consensus 269 ---d~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~~l~~~~~~~~~~~~~~ 341 (363)
T cd04955 269 ---ALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLEELEADPEEVSAMAKAA 341 (363)
T ss_pred ---CEEEeCCccCCCCChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHHHHHhCHHHHHHHHHHH
Confidence 999999998 9999999999999999999999999999865 8999987776 9999999999999999999999
Q ss_pred HHHH-hcCCHHHHHHHHHHHHH
Q 001557 645 LKNI-HQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 645 ~~~v-~~fsw~~~a~~yl~~l~ 665 (1054)
++.+ +.|||+.++++|+++|+
T Consensus 342 ~~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 342 RERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred HHHHHHhCCHHHHHHHHHHHhC
Confidence 9998 58999999999999873
No 32
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=100.00 E-value=4e-32 Score=313.39 Aligned_cols=278 Identities=26% Similarity=0.385 Sum_probs=224.7
Q ss_pred CcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEec
Q 001557 305 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 384 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~ 384 (1054)
.+||+||+|....+..+..+++.+|+|+|++.|+............ . .++..+. .+...++.+|.|+++
T Consensus 81 ~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~---~------~~~~~~~--~~~~~~~~~d~ii~~ 149 (367)
T cd05844 81 HRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLALLLR---S------RWALYAR--RRRRLARRAALFIAV 149 (367)
T ss_pred hCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccchhhcc---c------chhHHHH--HHHHHHHhcCEEEEC
Confidence 5699999998777777888888899999999997533221111000 0 0111111 245578999999999
Q ss_pred CHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhH
Q 001557 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS 464 (1054)
Q Consensus 385 S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1054)
|+...+.+... +..+ +++.++|||+|.+.|.+...
T Consensus 150 s~~~~~~~~~~--~~~~---------------------~~i~vi~~g~d~~~~~~~~~---------------------- 184 (367)
T cd05844 150 SQFIRDRLLAL--GFPP---------------------EKVHVHPIGVDTAKFTPATP---------------------- 184 (367)
T ss_pred CHHHHHHHHHc--CCCH---------------------HHeEEecCCCCHHhcCCCCC----------------------
Confidence 99877665432 2222 27999999999988764311
Q ss_pred HHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCC
Q 001557 465 EIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLY 543 (1054)
Q Consensus 465 ~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~ 543 (1054)
..+.+.|+++|++.+.||++.+++|+..+.+. .+++.| ++|+++. ...+.++++++++.
T Consensus 185 -------~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~--~~~~~l~ivG~g~~-----------~~~~~~~~~~~~~~ 244 (367)
T cd05844 185 -------ARRPPRILFVGRFVEKKGPLLLLEAFARLARR--VPEVRLVIIGDGPL-----------LAALEALARALGLG 244 (367)
T ss_pred -------CCCCcEEEEEEeeccccChHHHHHHHHHHHHh--CCCeEEEEEeCchH-----------HHHHHHHHHHcCCC
Confidence 13567899999999999999999999998643 345555 7787642 45677888898888
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC------CCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCC
Q 001557 544 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF------IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDP 617 (1054)
Q Consensus 544 ~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~------~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p 617 (1054)
++|.|.|.++.+++..+|+.| |++|+||. .|+||++++||||||+|||+++.|+..|++.++.+|+++++
T Consensus 245 ~~v~~~g~~~~~~l~~~~~~a----d~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~ 320 (367)
T cd05844 245 GRVTFLGAQPHAEVRELMRRA----RIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPE 320 (367)
T ss_pred CeEEECCCCCHHHHHHHHHhC----CEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECC
Confidence 999999999999999999999 99999996 59999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHH
Q 001557 618 HDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLS 662 (1054)
Q Consensus 618 ~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~ 662 (1054)
.|+++++++|.+++++++.+++++.++++.+ ++|||+.+++++.+
T Consensus 321 ~d~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 321 GDVAALAAALGRLLADPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 9999999999999999999999999999999 69999999998865
No 33
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=8.1e-32 Score=313.37 Aligned_cols=382 Identities=15% Similarity=0.132 Sum_probs=250.6
Q ss_pred CcHhHHHHH----HHHHHhcCCCce--------EEEEEecCcCCCCCCCccCCccccccccccccccccc--CCCCCeEE
Q 001557 191 GGQVKYVVE----LARALGSMPGVY--------RVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGL--GESSGAYI 256 (1054)
Q Consensus 191 GG~~~~v~e----La~aLa~~~Gv~--------~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~g~~i 256 (1054)
||+++.+.. +++++.+. + - -|+|+++...+ ....++ |..+. ...++..+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~-~~~~~~--------------~~~~~~~~~~~~~~~ 236 (578)
T PRK15490 174 GGAERQISRLAIEIARKYRQK-G-KIGGLKVEEPVELIIRSLTP-ELRQDF--------------FLKEVLEEQVEVLEI 236 (578)
T ss_pred CchHHHHHHHHHHHHHHHHhc-c-cccccccccceeEEEeecCc-ccCcch--------------hHHHHHhcCCceEEe
Confidence 999999994 45554443 2 2 58899987642 111111 11111 12234444
Q ss_pred EEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHccCCCCEEEE-
Q 001557 257 IRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFT- 335 (1054)
Q Consensus 257 ~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t- 335 (1054)
-.++ .+.|-.-..+.|.+..|+..+-..+..-...|..++.. .+|||||+|...+...+.+.+...++|++++
T Consensus 237 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ir~---~rpDIVHt~~~~a~l~g~laA~lagvpviv~~ 310 (578)
T PRK15490 237 AKIT---GNLFDDATIESPELRLLLSHLPPVCKYGIKHLVPHLCE---RKLDYLSVWQDGACLMIALAALIAGVPRIQLG 310 (578)
T ss_pred eccc---hhhhhhccccchHHHHHHhcCChHHHHHHHHHHHHHHH---cCCCEEEEcCcccHHHHHHHHHhcCCCEEEEe
Confidence 4444 22222222344544454443322222222223333322 6799999998777677777777779999654
Q ss_pred eCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhccc
Q 001557 336 GHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGV 415 (1054)
Q Consensus 336 ~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv 415 (1054)
.|++.......+ +...+...++ -..+...+| +++.|....+.+...+ +.
T Consensus 311 ~h~~~~~~~~r~----------~~~e~~~~~~---a~~i~~~sd-~v~~s~~v~~~l~~~l-gi---------------- 359 (578)
T PRK15490 311 LRGLPPVVRKRL----------FKPEYEPLYQ---ALAVVPGVD-FMSNNHCVTRHYADWL-KL---------------- 359 (578)
T ss_pred ecccCCcchhhH----------HHHHHHHhhh---hceeEecch-hhhccHHHHHHHHHHh-CC----------------
Confidence 665322111100 0011111100 001233344 4455554444433332 22
Q ss_pred ccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHH
Q 001557 416 SCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVK 495 (1054)
Q Consensus 416 ~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~ 495 (1054)
+..++.|||||||...|.+..... ...+... +....++.++|+++||+.+.||+..+++
T Consensus 360 -----p~~KI~VIyNGVD~~rf~p~~~~~---------------~~~r~~~-~~~l~~~~~vIg~VgRl~~~Kg~~~LI~ 418 (578)
T PRK15490 360 -----EAKHFQVVYNGVLPPSTEPSSEVP---------------HKIWQQF-TQKTQDADTTIGGVFRFVGDKNPFAWID 418 (578)
T ss_pred -----CHHHEEEEeCCcchhhcCccchhh---------------HHHHHHh-hhccCCCCcEEEEEEEEehhcCHHHHHH
Confidence 233899999999999887632100 0011111 1112356689999999999999999999
Q ss_pred HHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEec
Q 001557 496 AFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINP 574 (1054)
Q Consensus 496 A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~p 574 (1054)
++..+.+. .+++.| |+|+++. ...+.+++.++++.++|.|+|+ .+|++.+|+.| |+||+|
T Consensus 419 A~a~llk~--~pdirLvIVGdG~~-----------~eeLk~la~elgL~d~V~FlG~--~~Dv~~~LaaA----DVfVlP 479 (578)
T PRK15490 419 FAARYLQH--HPATRFVLVGDGDL-----------RAEAQKRAEQLGILERILFVGA--SRDVGYWLQKM----NVFILF 479 (578)
T ss_pred HHHHHHhH--CCCeEEEEEeCchh-----------HHHHHHHHHHcCCCCcEEECCC--hhhHHHHHHhC----CEEEEc
Confidence 99887543 355654 7788764 4567888999999999999998 57999999999 999999
Q ss_pred CCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHH---HHHHhCHHHHHHHHHHHHHHH-hc
Q 001557 575 AFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADAL---LKLVSDKQLWERCRQNGLKNI-HQ 650 (1054)
Q Consensus 575 s~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI---~~ll~d~~~~~~~~~~~~~~v-~~ 650 (1054)
|.+||||++++||||||+|||+|+.||..|+|.++.+|++|++.|++++++++ .++.........+++++++.+ ++
T Consensus 480 S~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~ 559 (578)
T PRK15490 480 SRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYAEKLVNLWRSRTGICQQTQSFLQER 559 (578)
T ss_pred ccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999998887 344445555567889999999 69
Q ss_pred CCHHHHHHHHHHHHHH
Q 001557 651 FSWPEHCKSYLSRISS 666 (1054)
Q Consensus 651 fsw~~~a~~yl~~l~~ 666 (1054)
|||+.++++|.++|..
T Consensus 560 FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 560 FTVEHMVGTFVKTIAS 575 (578)
T ss_pred CCHHHHHHHHHHHHHh
Confidence 9999999999999974
No 34
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=100.00 E-value=2.4e-32 Score=317.00 Aligned_cols=284 Identities=19% Similarity=0.228 Sum_probs=207.6
Q ss_pred CcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEec
Q 001557 305 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 384 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~ 384 (1054)
.+|||||+|++....+ ....+..++|+|++.|+...... ...+++. +..++.+|.+++.
T Consensus 84 ~~~Dvv~~h~~~~~~~-~~~~~~~~~~~i~~~H~~~~~~~--------------~~~~~~~------~~~~~~~d~~i~~ 142 (372)
T cd03792 84 LDADVVVIHDPQPLAL-PLFKKKRGRPWIWRCHIDLSSPN--------------RRVWDFL------QPYIEDYDAAVFH 142 (372)
T ss_pred CCCCEEEECCCCchhH-HHhhhcCCCeEEEEeeeecCCCc--------------HHHHHHH------HHHHHhCCEEeec
Confidence 4699999998754322 22233348999999997532110 0111222 2346788999888
Q ss_pred CHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchh-
Q 001557 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIW- 463 (1054)
Q Consensus 385 S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~- 463 (1054)
|...+.. .+. . +..+||||||........ ..+...
T Consensus 143 ~~~~~~~------~~~---------------------~-~~~vipngvd~~~~~~~~----------------~~~~~~~ 178 (372)
T cd03792 143 LPEYVPP------QVP---------------------P-RKVIIPPSIDPLSGKNRE----------------LSPADIE 178 (372)
T ss_pred HHHhcCC------CCC---------------------C-ceEEeCCCCCCCccccCC----------------CCHHHHH
Confidence 7432211 111 1 333999999975322110 011111
Q ss_pred HHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCC
Q 001557 464 SEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLY 543 (1054)
Q Consensus 464 ~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~ 543 (1054)
..+.++...+++++|+++||+++.||++.+++|+..+.+..+...+ +++|+++..+.. ....+.++.+..++.
T Consensus 179 ~~~~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l-~i~G~g~~~~~~------~~~~~~~~~~~~~~~ 251 (372)
T cd03792 179 YILEKYGIDPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQL-VLVGSGATDDPE------GWIVYEEVLEYAEGD 251 (372)
T ss_pred HHHHHhCCCCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEE-EEEeCCCCCCch------hHHHHHHHHHHhCCC
Confidence 2233455567889999999999999999999999998653333333 477887542111 112233444456677
Q ss_pred CCEEeCCCC--CCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHH
Q 001557 544 GQVAYPKHH--KQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQ 621 (1054)
Q Consensus 544 ~~V~~~g~~--~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~ 621 (1054)
++|.|.|.. +.+++..+|+.| |+|++||..||||++++||||||+|||+++.||..+++.++.+|++++ +.+
T Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~a----d~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~ 325 (372)
T cd03792 252 PDIHVLTLPPVSDLEVNALQRAS----TVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVE 325 (372)
T ss_pred CCeEEEecCCCCHHHHHHHHHhC----eEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcH
Confidence 789998876 788999999999 999999999999999999999999999999999999999999999997 567
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHH
Q 001557 622 SIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISS 666 (1054)
Q Consensus 622 ~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~~ 666 (1054)
+++.+|.+++++++++++|++++++.+ ++|+|+..+++|+++|+.
T Consensus 326 ~~a~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 326 EAAVRILYLLRDPELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 899999999999999999999999998 699999999999999975
No 35
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=2.8e-31 Score=304.50 Aligned_cols=341 Identities=24% Similarity=0.290 Sum_probs=255.0
Q ss_pred CCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCcccc
Q 001557 190 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQ 269 (1054)
Q Consensus 190 tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~ 269 (1054)
.||.++++.+|+++|+++ | |+|.+++.... .... ....|+.++.++.....
T Consensus 9 ~gG~e~~~~~l~~~L~~~-g-~~v~v~~~~~~----------~~~~-------------~~~~~~~~~~~~~~~~~---- 59 (355)
T cd03819 9 SGGVERGTLELARALVER-G-HRSLVASAGGR----------LVAE-------------LEAEGSRHIKLPFISKN---- 59 (355)
T ss_pred cCcHHHHHHHHHHHHHHc-C-CEEEEEcCCCc----------hHHH-------------HHhcCCeEEEccccccc----
Confidence 389999999999999999 8 99999985310 0000 11236777777654321
Q ss_pred cccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHH
Q 001557 270 KELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLK 349 (1054)
Q Consensus 270 k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~ 349 (1054)
.+.. +..+..+.+.+.+ .+||+||+|+......+.+.++..++|+|++.|+......
T Consensus 60 ---~~~~--------~~~~~~l~~~~~~-------~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~----- 116 (355)
T cd03819 60 ---PLRI--------LLNVARLRRLIRE-------EKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF----- 116 (355)
T ss_pred ---hhhh--------HHHHHHHHHHHHH-------cCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH-----
Confidence 1111 1111222223322 5699999998777777777777889999999998743220
Q ss_pred hCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeC
Q 001557 350 QGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIP 429 (1054)
Q Consensus 350 ~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIP 429 (1054)
+ ....+..+|.++++|+...+.+...|+. +..++.+||
T Consensus 117 --------------~------~~~~~~~~~~vi~~s~~~~~~~~~~~~~----------------------~~~k~~~i~ 154 (355)
T cd03819 117 --------------R------YNAIMARGDRVIAVSNFIADHIRENYGV----------------------DPDRIRVIP 154 (355)
T ss_pred --------------H------HHHHHHhcCEEEEeCHHHHHHHHHhcCC----------------------ChhhEEEec
Confidence 1 1224678999999999877765433322 223899999
Q ss_pred CCCcCCCcccCCCCCCCcccccCCCCCCCCCchhH-HHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc
Q 001557 430 PGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS-EIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELAN 508 (1054)
Q Consensus 430 nGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~ 508 (1054)
||+|...|.+.... ...+. .+.++...++.++|+++||+.+.||++.+++|+..+... .++
T Consensus 155 ngi~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~--~~~ 216 (355)
T cd03819 155 RGVDLDRFDPGAVP----------------PERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALARLKKD--DPD 216 (355)
T ss_pred CCccccccCccccc----------------hHHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHHHHhc--CCC
Confidence 99999888643211 01111 223333456778999999999999999999999998643 345
Q ss_pred EEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecC-CCCCCcHHHHH
Q 001557 509 LTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPA-FIEPFGLTLIE 586 (1054)
Q Consensus 509 l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps-~~Egfgl~l~E 586 (1054)
+.+ ++|.++..+. +...+.+.+.++++.++|.|+|+ .+++..+|+.| |++|+|| ..|+||++++|
T Consensus 217 ~~l~ivG~~~~~~~-------~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~l~~a----d~~i~ps~~~e~~~~~l~E 283 (355)
T cd03819 217 VHLLIVGDAQGRRF-------YYAELLELIKRLGLQDRVTFVGH--CSDMPAAYALA----DIVVSASTEPEAFGRTAVE 283 (355)
T ss_pred eEEEEEECCcccch-------HHHHHHHHHHHcCCcceEEEcCC--cccHHHHHHhC----CEEEecCCCCCCCchHHHH
Confidence 655 7787764322 34556678888898889999999 78999999999 9999999 79999999999
Q ss_pred HHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHH-hcCCHHH
Q 001557 587 AAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVS-DKQLWERCRQNGLKNI-HQFSWPE 655 (1054)
Q Consensus 587 AmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v-~~fsw~~ 655 (1054)
|||||+|||+++.||..|++.++.+|+++++.|+++++++|..++. +++++.++++++++.+ ++|+|+.
T Consensus 284 A~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~f~~~~ 354 (355)
T cd03819 284 AQAMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVETLFSYDR 354 (355)
T ss_pred HHhcCCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 9999999999999999999999889999999999999999976665 8999999999999999 6999975
No 36
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=4e-31 Score=316.22 Aligned_cols=293 Identities=22% Similarity=0.288 Sum_probs=233.1
Q ss_pred CcceEEEEcCC-CchHHHHHHHccCCCCEEEEeCCCccchHH-HHHHhCCCChhhhhh-HhHHHHHHHHHHhhhccCCEE
Q 001557 305 IWPVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGRDKLE-QLLKQGRLSRDEINT-TYKIMRRIEAEELSLDASEIV 381 (1054)
Q Consensus 305 ~~pDVIh~h~~-~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~-~l~~~g~~~~~~i~~-~~~~~~ri~~E~~~l~~ad~V 381 (1054)
.++||||+|.. .+++++..+++..++|+|+|.|++...... .+.... +....... ..+++++ .++.+++.||.|
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~-~~~~~~~~~~~~~~~~--l~~~~~~~ad~I 248 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQAD-WEMSYFRRLWIRFFES--LGRLAYQAADRI 248 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcc-cchHHHHHHHHHHHHH--HHHHHHHhCCEE
Confidence 36899999975 567788888888999999999997653322 121111 01111111 1122333 367789999999
Q ss_pred EecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCc
Q 001557 382 ITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPP 461 (1054)
Q Consensus 382 i~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1054)
++.|+...+.+.. + +..+ .++.|||||+|.+.|.+....
T Consensus 249 i~~s~~~~~~~~~-~-g~~~---------------------~ki~vIpNgid~~~f~~~~~~------------------ 287 (475)
T cd03813 249 TTLYEGNRERQIE-D-GADP---------------------EKIRVIPNGIDPERFAPARRA------------------ 287 (475)
T ss_pred EecCHHHHHHHHH-c-CCCH---------------------HHeEEeCCCcCHHHcCCcccc------------------
Confidence 9999976654422 2 2222 289999999999988753210
Q ss_pred hhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHc
Q 001557 462 IWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKY 540 (1054)
Q Consensus 462 ~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~ 540 (1054)
...++.++|+++||+.+.||++.+++|+..+.+. .+++.+ |+|+++.- ..+..++.++++++
T Consensus 288 --------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~p~~~l~IvG~g~~~-------~~~~~e~~~li~~l 350 (475)
T cd03813 288 --------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKK--IPDAEGWVIGPTDED-------PEYAEECRELVESL 350 (475)
T ss_pred --------ccCCCCcEEEEEeccccccCHHHHHHHHHHHHHh--CCCeEEEEECCCCcC-------hHHHHHHHHHHHHh
Confidence 0135678999999999999999999999998643 456665 77887521 34577889999999
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceee------CCceEE
Q 001557 541 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV------LDNGLL 614 (1054)
Q Consensus 541 ~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~------~~~Gll 614 (1054)
++.++|.|+| .+++.++|+.| |++|+||..|+||++++||||||+|||+|+.|+..|++.+ +.+|++
T Consensus 351 ~l~~~V~f~G---~~~v~~~l~~a----Dv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~l 423 (475)
T cd03813 351 GLEDNVKFTG---FQNVKEYLPKL----DVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEV 423 (475)
T ss_pred CCCCeEEEcC---CccHHHHHHhC----CEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEE
Confidence 9999999999 57999999999 9999999999999999999999999999999999999988 568999
Q ss_pred eCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 001557 615 VDPHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 615 v~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~ 665 (1054)
++|.|+++++++|.++++|++.++++++++++.+ +.|+|+.++++|.++|+
T Consensus 424 v~~~d~~~la~ai~~ll~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 424 VPPADPEALARAILRLLKDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred ECCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999 68999999999999873
No 37
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=100.00 E-value=1.6e-30 Score=305.77 Aligned_cols=378 Identities=15% Similarity=0.107 Sum_probs=247.6
Q ss_pred CcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCccccc
Q 001557 191 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQK 270 (1054)
Q Consensus 191 GG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~k 270 (1054)
+|...++.+++++|++. | |+|+|++.....+ . .+.....|+.++.++..+...
T Consensus 14 ~~~~~R~~~~a~~L~~~-G-~~V~ii~~~~~~~---------~------------~~~~~~~~v~~~~~~~~~~~~---- 66 (415)
T cd03816 14 IGRSPRMQYHALSLAKH-G-WKVDLVGYLETPP---------H------------DEILSNPNITIHPLPPPPQRL---- 66 (415)
T ss_pred cCCCHHHHHHHHHHHhc-C-ceEEEEEecCCCC---------C------------HHHhcCCCEEEEECCCCcccc----
Confidence 46667779999999999 8 9999998642110 0 011123588888887653100
Q ss_pred ccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCc---hHHHHHHHccCCCCEEEEeCCCccchHHHH
Q 001557 271 ELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADA---GDAAALLSGALNVPMVFTGHSLGRDKLEQL 347 (1054)
Q Consensus 271 ~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a---~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l 347 (1054)
...+++..+...+......+.+.+.. ..+||+||+|.... ..++.++++..++|+|++.|+.+....
T Consensus 67 -~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~--- 136 (415)
T cd03816 67 -NKLPFLLFAPLKVLWQFFSLLWLLYK------LRPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTIL--- 136 (415)
T ss_pred -ccchHHHHHHHHHHHHHHHHHHHHHh------cCCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHH---
Confidence 00111111212222222222222222 14699999987432 334555666679999999998753211
Q ss_pred HHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEE
Q 001557 348 LKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVV 427 (1054)
Q Consensus 348 ~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~v 427 (1054)
..+. .. .....++.+++ |+..++.+|.||++|+...+.+.+ +. .+..++.|
T Consensus 137 -~~~~-~~--~~~~~~~~~~~--e~~~~~~ad~ii~vS~~~~~~l~~-~~----------------------~~~~ki~v 187 (415)
T cd03816 137 -ALKL-GE--NHPLVRLAKWY--EKLFGRLADYNLCVTKAMKEDLQQ-FN----------------------NWKIRATV 187 (415)
T ss_pred -hccc-CC--CCHHHHHHHHH--HHHHhhcCCEeeecCHHHHHHHHh-hh----------------------ccCCCeee
Confidence 1111 00 01112344443 777899999999999988776543 22 12238999
Q ss_pred eCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhccccc---
Q 001557 428 IPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLR--- 504 (1054)
Q Consensus 428 IPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~--- 504 (1054)
||||. ...|.|........ ..........+............++.++++++||+.+.||++.+++|+..++...
T Consensus 188 I~Ng~-~~~f~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~ 264 (415)
T cd03816 188 LYDRP-PEQFRPLPLEEKHE--LFLKLAKTFLTRELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAATG 264 (415)
T ss_pred cCCCC-HHHceeCcHHHHHH--HHHhccccccccccccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhhccc
Confidence 99994 45666532110000 0000000000000000000011234567889999999999999999999986421
Q ss_pred -CCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecC---CCCC
Q 001557 505 -ELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPA---FIEP 579 (1054)
Q Consensus 505 -~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps---~~Eg 579 (1054)
..+++.| |+|+|+. ...+.++++++++.+.+.+.|+++.++++.+|+.| |++|.|+ ..|+
T Consensus 265 ~~~~~i~l~ivG~G~~-----------~~~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~a----Dv~v~~~~~~~~~~ 329 (415)
T cd03816 265 PKLPKLLCIITGKGPL-----------KEKYLERIKELKLKKVTIRTPWLSAEDYPKLLASA----DLGVSLHTSSSGLD 329 (415)
T ss_pred ccCCCEEEEEEecCcc-----------HHHHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHhC----CEEEEccccccccC
Confidence 2356765 7798875 45677888899998777777899999999999999 9999753 3588
Q ss_pred CcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHhcCCHHH
Q 001557 580 FGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSD---KQLWERCRQNGLKNIHQFSWPE 655 (1054)
Q Consensus 580 fgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d---~~~~~~~~~~~~~~v~~fsw~~ 655 (1054)
||++++||||||+|||+++.||..|++.++.+|++++ |+++++++|.++++| ++++++|++++++.. .++|++
T Consensus 330 ~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~-~~~~~~ 405 (415)
T cd03816 330 LPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES-ELRWDE 405 (415)
T ss_pred CcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh-hcCHHH
Confidence 9999999999999999999999999999999999995 999999999999999 899999999999887 445543
No 38
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=100.00 E-value=2.6e-32 Score=292.07 Aligned_cols=367 Identities=19% Similarity=0.239 Sum_probs=266.4
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccc
Q 001557 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 245 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~ 245 (1054)
++|++||.|.| |.+||.+.+++.|++.|-++ | |.|.++|-.+ |.....
T Consensus 1 ~~i~mVsdff~-----------P~~ggveshiy~lSq~li~l-g-hkVvvithay---------g~r~gi---------- 48 (426)
T KOG1111|consen 1 SRILMVSDFFY-----------PSTGGVESHIYALSQCLIRL-G-HKVVVITHAY---------GNRVGI---------- 48 (426)
T ss_pred CcceeeCcccc-----------cCCCChhhhHHHhhcchhhc-C-CeEEEEeccc---------cCccce----------
Confidence 47999999877 88999999999999999999 8 9999999653 332111
Q ss_pred cccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHH--HHH
Q 001557 246 QGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDA--AAL 323 (1054)
Q Consensus 246 ~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~--a~~ 323 (1054)
..-.+|+.++.+|+.. ...+...|-+.+...- ++.+. +. .++.+||+|.+++.++ +.+
T Consensus 49 --rylt~glkVyylp~~v----~~n~tT~ptv~~~~Pl-lr~i~-----lr--------E~I~ivhghs~fS~lahe~l~ 108 (426)
T KOG1111|consen 49 --RYLTNGLKVYYLPAVV----GYNQTTFPTVFSDFPL-LRPIL-----LR--------ERIEIVHGHSPFSYLAHEALM 108 (426)
T ss_pred --eeecCCceEEEEeeee----eecccchhhhhccCcc-cchhh-----hh--------hceEEEecCChHHHHHHHHHH
Confidence 1123578888888732 1222233322221110 11111 11 3489999999765443 667
Q ss_pred HHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHH
Q 001557 324 LSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVL 403 (1054)
Q Consensus 324 l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l 403 (1054)
.++.+|..+|||-|+++-.. .++....+ + .-...+...|.+||+|....+. .-+.....|
T Consensus 109 hartMGlktVfTdHSlfGfa--------d~~si~~n---~------ll~~sL~~id~~IcVshtsken-tvlr~~L~p-- 168 (426)
T KOG1111|consen 109 HARTMGLKTVFTDHSLFGFA--------DIGSILTN---K------LLPLSLANIDRIICVSHTSKEN-TVLRGALAP-- 168 (426)
T ss_pred HHHhcCceEEEecccccccc--------chhhhhhc---c------eeeeeecCCCcEEEEeecCCCc-eEEEeccCH--
Confidence 78889999999999974321 00111111 1 1234688999999998743322 112222233
Q ss_pred HHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeC
Q 001557 404 ERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALAR 483 (1054)
Q Consensus 404 ~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgR 483 (1054)
.++.+|||.++.+.|.|.++.. .+.+...|+.++|
T Consensus 169 -------------------~kvsvIPnAv~~~~f~P~~~~~--------------------------~S~~i~~ivv~sR 203 (426)
T KOG1111|consen 169 -------------------AKVSVIPNAVVTHTFTPDAADK--------------------------PSADIITIVVASR 203 (426)
T ss_pred -------------------hHeeeccceeeccccccCcccc--------------------------CCCCeeEEEEEee
Confidence 3899999999999999854321 0234478999999
Q ss_pred CCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHH
Q 001557 484 PDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYR 562 (1054)
Q Consensus 484 ld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~ 562 (1054)
|-++||++.+++++.++.. ..|++.+ |+|+||... .+++..+++.++.+|.++|.++.+++.+.|.
T Consensus 204 LvyrKGiDll~~iIp~vc~--~~p~vrfii~GDGPk~i-----------~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~ 270 (426)
T KOG1111|consen 204 LVYRKGIDLLLEIIPSVCD--KHPEVRFIIIGDGPKRI-----------DLEEMLEKLFLQDRVVMLGTVPHDRVRDVLV 270 (426)
T ss_pred eeeccchHHHHHHHHHHHh--cCCCeeEEEecCCcccc-----------hHHHHHHHhhccCceEEecccchHHHHHHHh
Confidence 9999999999999999964 4455654 779998643 4567888999999999999999999999999
Q ss_pred HhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHH
Q 001557 563 LAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQ 642 (1054)
Q Consensus 563 ~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~ 642 (1054)
.- |+|++||+.|.|++++.|||.||+|||+|..||.+|++.+. -+...+..++++++++++++..-... -.
T Consensus 271 ~G----~IFlntSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d--~i~~~~~~~~dl~~~v~~ai~~~~~~---p~ 341 (426)
T KOG1111|consen 271 RG----DIFLNTSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED--MITLGEPGPDDLVGAVEKAITKLRTL---PL 341 (426)
T ss_pred cC----cEEeccHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCcc--ceeccCCChHHHHHHHHHHHHHhccC---ch
Confidence 99 99999999999999999999999999999999999998643 34456678999999999998732211 23
Q ss_pred HHHHHH-hcCCHHHHHHHHHHHHHHhhhcC
Q 001557 643 NGLKNI-HQFSWPEHCKSYLSRISSCKQRQ 671 (1054)
Q Consensus 643 ~~~~~v-~~fsw~~~a~~yl~~l~~~~~~~ 671 (1054)
...+.+ +.|+|...|++-.+.|.++....
T Consensus 342 ~~h~~v~~~y~w~dVa~rTekvy~r~~~t~ 371 (426)
T KOG1111|consen 342 EFHDRVKKMYSWKDVAERTEKVYDRAATTS 371 (426)
T ss_pred hHHHHHHHhccHHHHHHHHHHHHHHHhhcc
Confidence 334455 58999999999999999876543
No 39
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=100.00 E-value=1.2e-30 Score=296.71 Aligned_cols=332 Identities=20% Similarity=0.214 Sum_probs=233.4
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccc
Q 001557 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 245 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~ 245 (1054)
|||++|+....+- + +|..||.++++.+|+++|.+. | |+|++++.......
T Consensus 1 MkI~~i~~~~~~~------~-~~~~GG~~~~~~~l~~~L~~~-g-~~V~v~~~~~~~~~--------------------- 50 (335)
T cd03802 1 MRIALVAPPREPV------P-PPAYGGTERVVAALTEGLVAR-G-HEVTLFASGDSKTA--------------------- 50 (335)
T ss_pred CeEEEEcCCcccC------C-CcccCcHHHHHHHHHHHHHhc-C-ceEEEEecCCCCcc---------------------
Confidence 8999999643210 0 256799999999999999999 8 99999996421100
Q ss_pred cccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHH
Q 001557 246 QGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLS 325 (1054)
Q Consensus 246 ~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~ 325 (1054)
........... .... .. ...........+.+.+.+ .+|||||+|.+..... ++
T Consensus 51 --------~~~~~~~~~~~--~~~~---~~----~~~~~~~~~~~~~~~~~~-------~~~Divh~~~~~~~~~---~~ 103 (335)
T cd03802 51 --------APLVPVVPEPL--RLDA---PG----RDRAEAEALALAERALAA-------GDFDIVHNHSLHLPLP---FA 103 (335)
T ss_pred --------cceeeccCCCc--cccc---ch----hhHhhHHHHHHHHHHHhc-------CCCCEEEecCcccchh---hh
Confidence 00010000000 0000 00 000111111112222221 5699999998765544 56
Q ss_pred ccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHH
Q 001557 326 GALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1054)
Q Consensus 326 ~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~ 405 (1054)
+..++|+|++.|+........ . .......+.++++|+...+.....
T Consensus 104 ~~~~~~~v~~~h~~~~~~~~~-----------------~-------~~~~~~~~~~~~~s~~~~~~~~~~---------- 149 (335)
T cd03802 104 RPLPVPVVTTLHGPPDPELLK-----------------L-------YYAARPDVPFVSISDAQRRPWPPL---------- 149 (335)
T ss_pred cccCCCEEEEecCCCCcccch-----------------H-------HHhhCcCCeEEEecHHHHhhcccc----------
Confidence 678999999999875432110 0 123567788999988665432111
Q ss_pred HHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCC
Q 001557 406 KLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPD 485 (1054)
Q Consensus 406 ~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld 485 (1054)
.++.+||||+|.+.|.+. ...++.|+++||+.
T Consensus 150 -----------------~~~~vi~ngvd~~~~~~~-------------------------------~~~~~~i~~~Gr~~ 181 (335)
T cd03802 150 -----------------PWVATVHNGIDLDDYPFR-------------------------------GPKGDYLLFLGRIS 181 (335)
T ss_pred -----------------cccEEecCCcChhhCCCC-------------------------------CCCCCEEEEEEeec
Confidence 289999999999888641 13467899999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcC-CCCCEEeCCCCCCCcHHHHHHHh
Q 001557 486 PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYD-LYGQVAYPKHHKQSDVPDIYRLA 564 (1054)
Q Consensus 486 ~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~-l~~~V~~~g~~~~~dl~~ly~~A 564 (1054)
+.||++.+++++... ...+ +++|.++..+. +........ +.++|.|+|+++.+++..+|+.|
T Consensus 182 ~~Kg~~~li~~~~~~-----~~~l-~i~G~~~~~~~-----------~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~ 244 (335)
T cd03802 182 PEKGPHLAIRAARRA-----GIPL-KLAGPVSDPDY-----------FYREIAPELLDGPDIEYLGEVGGAEKAELLGNA 244 (335)
T ss_pred cccCHHHHHHHHHhc-----CCeE-EEEeCCCCHHH-----------HHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhC
Confidence 999999999998654 1233 47788764222 222233322 45789999999999999999999
Q ss_pred hcCCcEEEecCC-CCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 001557 565 AKTKGVFINPAF-IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQN 643 (1054)
Q Consensus 565 a~~~dv~v~ps~-~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~ 643 (1054)
|++|+|+. .|+||++++||||||+|||+++.||..|++.++.+|+++++ +++++++|.+++..+ .++
T Consensus 245 ----d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~------~~~ 312 (335)
T cd03802 245 ----RALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLD------RAA 312 (335)
T ss_pred ----cEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccH------HHH
Confidence 99999997 59999999999999999999999999999999889999985 999999999987643 235
Q ss_pred HHHHH-hcCCHHHHHHHHHHHHH
Q 001557 644 GLKNI-HQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 644 ~~~~v-~~fsw~~~a~~yl~~l~ 665 (1054)
+++.+ ++|||+..+++|+++|+
T Consensus 313 ~~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 313 CRRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred HHHHHHHhCCHHHHHHHHHHHhC
Confidence 56666 79999999999999873
No 40
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.4e-30 Score=298.51 Aligned_cols=352 Identities=22% Similarity=0.277 Sum_probs=254.6
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccccccc
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 246 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 246 (1054)
||++|+.. + +|+.||.++++.+|+++|.+. | |+|+|++....... ..
T Consensus 1 kil~i~~~-~----------~p~~gG~~~~~~~l~~~L~~~-g-~~v~v~~~~~~~~~-------~~------------- 47 (357)
T cd03795 1 RVLHVGKF-Y----------PPDRGGIEQVIRDLAEGLAAR-G-IEVAVLCASPEPKG-------RD------------- 47 (357)
T ss_pred CeeEecCC-C----------CCCCCcHHHHHHHHHHHHHhC-C-CceEEEecCCCCcc-------hh-------------
Confidence 68899863 3 266899999999999999999 8 99999997532111 00
Q ss_pred ccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHc
Q 001557 247 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSG 326 (1054)
Q Consensus 247 ~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~ 326 (1054)
....+..+.+++.... ....+....+ ...+. + ...+||+||+|+............
T Consensus 48 --~~~~~~~~~~~~~~~~------~~~~~~~~~~----~~~~~-----~-------~~~~~Dii~~~~~~~~~~~~~~~~ 103 (357)
T cd03795 48 --EERNGHRVIRAPSLLN------VASTPFSPSF----FKQLK-----K-------LAKKADVIHLHFPNPLADLALLLL 103 (357)
T ss_pred --hhccCceEEEeecccc------cccccccHHH----HHHHH-----h-------cCCCCCEEEEecCcchHHHHHHHh
Confidence 0113445666553211 0011111111 11110 1 125699999998644333222333
Q ss_pred cCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHH
Q 001557 327 ALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK 406 (1054)
Q Consensus 327 ~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~ 406 (1054)
..++|++++.|+...... ..+++.+. .++..++.+|.|+++|+...+.....+..
T Consensus 104 ~~~~~~i~~~h~~~~~~~---------------~~~~~~~~--~~~~~~~~~d~vi~~s~~~~~~~~~~~~~-------- 158 (357)
T cd03795 104 PRKKPVVVHWHSDIVKQK---------------LLLKLYRP--LQRRFLRRADAIVATSPNYAETSPVLRRF-------- 158 (357)
T ss_pred ccCceEEEEEcChhhccc---------------hhhhhhhH--HHHHHHHhcCEEEeCcHHHHHHHHHhcCC--------
Confidence 368999999997432110 01111122 24557899999999999877654333221
Q ss_pred HHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCC
Q 001557 407 LRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDP 486 (1054)
Q Consensus 407 l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~ 486 (1054)
..++.+||||+|...+.+..... ........+.+.|+++||+.+
T Consensus 159 ---------------~~~~~~i~~gi~~~~~~~~~~~~---------------------~~~~~~~~~~~~i~~~G~~~~ 202 (357)
T cd03795 159 ---------------RDKVRVIPLGLDPARYPRPDALE---------------------EAIWRRAAGRPFFLFVGRLVY 202 (357)
T ss_pred ---------------ccceEEecCCCChhhcCCcchhh---------------------hHhhcCCCCCcEEEEeccccc
Confidence 12899999999998776432100 011222456789999999999
Q ss_pred CCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhh
Q 001557 487 KKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAA 565 (1054)
Q Consensus 487 ~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa 565 (1054)
.||++.+++|+.++. ++.+ |+|+++. ...+.+++.++++..+|.|+|+++.+++..+|+.|
T Consensus 203 ~K~~~~li~a~~~l~------~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~a- 264 (357)
T cd03795 203 YKGLDVLLEAAAALP------DAPLVIVGEGPL-----------EAELEALAAALGLLDRVRFLGRLDDEEKAALLAAC- 264 (357)
T ss_pred ccCHHHHHHHHHhcc------CcEEEEEeCChh-----------HHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhC-
Confidence 999999999999984 4444 7787764 34566777788888999999999999999999999
Q ss_pred cCCcEEEecCC--CCCCcHHHHHHHHcCCCEEEccccCcccceee-CCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHH
Q 001557 566 KTKGVFINPAF--IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV-LDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQ 642 (1054)
Q Consensus 566 ~~~dv~v~ps~--~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~-~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~ 642 (1054)
|++++||. .|+||++++|||+||+|||+++.|+..+.+.. +.+|+++++.|+++++++|.+++++++.++++++
T Consensus 265 ---d~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~~~~~~~~~ 341 (357)
T cd03795 265 ---DVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDPELRERLGE 341 (357)
T ss_pred ---CEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCHHHHHHHHH
Confidence 99999986 59999999999999999999999999998876 8899999999999999999999999999999999
Q ss_pred HHHHHH-hcCCHHHHH
Q 001557 643 NGLKNI-HQFSWPEHC 657 (1054)
Q Consensus 643 ~~~~~v-~~fsw~~~a 657 (1054)
++++.+ +.|||+.++
T Consensus 342 ~~~~~~~~~~s~~~~~ 357 (357)
T cd03795 342 AARERAEEEFTADRMV 357 (357)
T ss_pred HHHHHHHHhcchHhhC
Confidence 999999 799998764
No 41
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=100.00 E-value=2.3e-30 Score=297.20 Aligned_cols=385 Identities=21% Similarity=0.255 Sum_probs=271.2
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccccccc
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 246 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 246 (1054)
||++|+.+.. |..||...++..++++|++. | |+|++++.....+....... .
T Consensus 1 kIl~i~~~~~-----------~~~~G~~~~~~~l~~~L~~~-g-~~v~~~~~~~~~~~~~~~~~---------------~ 52 (394)
T cd03794 1 KILILSQYFP-----------PELGGGAFRTTELAEELVKR-G-HEVTVITGSPNYPSGKIYKG---------------Y 52 (394)
T ss_pred CEEEEecccC-----------CccCCcceeHHHHHHHHHhC-C-ceEEEEecCCCccccccccc---------------c
Confidence 6899996433 45589999999999999999 8 99999997532221100000 0
Q ss_pred ccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCC--CchHHHHHH
Q 001557 247 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYA--DAGDAAALL 324 (1054)
Q Consensus 247 ~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~--~a~~~a~~l 324 (1054)
......++.+++++...... ... +..+ .....+.......+.. +..+||+||+|.+ .....+..+
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~----~~~---~~~~-~~~~~~~~~~~~~~~~-----~~~~~D~v~~~~~~~~~~~~~~~~ 119 (394)
T cd03794 53 KREEVDGVRVHRVPLPPYKK----NGL---LKRL-LNYLSFALSALLALLK-----RRRRPDVIIATSPPLLIALAALLL 119 (394)
T ss_pred eEEecCCeEEEEEecCCCCc----cch---HHHH-HhhhHHHHHHHHHHHh-----cccCCCEEEEcCChHHHHHHHHHH
Confidence 00123578888877654311 000 0010 0111111111222211 1256999999973 345556666
Q ss_pred HccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHH
Q 001557 325 SGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 404 (1054)
Q Consensus 325 ~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~ 404 (1054)
++..++|+|++.|++++....... ...... ..+++.+++ ++..++.+|.|+++|+...+.+. .+.
T Consensus 120 ~~~~~~~~i~~~h~~~~~~~~~~~---~~~~~~--~~~~~~~~~--~~~~~~~~d~vi~~s~~~~~~~~-~~~------- 184 (394)
T cd03794 120 ARLKGAPFVLEVRDLWPESAVALG---LLKNGS--LLYRLLRKL--ERLIYRRADAIVVISPGMREYLV-RRG------- 184 (394)
T ss_pred HHhcCCCEEEEehhhcchhHHHcc---Cccccc--hHHHHHHHH--HHHHHhcCCEEEEECHHHHHHHH-hcC-------
Confidence 777799999999998765543221 111110 111333333 67789999999999998877653 111
Q ss_pred HHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCC
Q 001557 405 RKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARP 484 (1054)
Q Consensus 405 ~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRl 484 (1054)
.+..++.++|||++...+.+..... . ........+++.|+++|++
T Consensus 185 ---------------~~~~~~~~i~~~~~~~~~~~~~~~~-----------------~---~~~~~~~~~~~~i~~~G~~ 229 (394)
T cd03794 185 ---------------VPPEKISVIPNGVDLELFKPPPADE-----------------S---LRKELGLDDKFVVLYAGNI 229 (394)
T ss_pred ---------------CCcCceEEcCCCCCHHHcCCccchh-----------------h---hhhccCCCCcEEEEEecCc
Confidence 1223899999999988776432110 0 1222234667889999999
Q ss_pred CCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHH
Q 001557 485 DPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRL 563 (1054)
Q Consensus 485 d~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~ 563 (1054)
.+.||++.+++|+..+.+. +++.+ ++|.++.. ..+.+.+...++ ++|.|.|+++.+++..+|+.
T Consensus 230 ~~~k~~~~l~~~~~~l~~~---~~~~l~i~G~~~~~-----------~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~ 294 (394)
T cd03794 230 GRAQGLDTLLEAAALLKDR---PDIRFLIVGDGPEK-----------EELKELAKALGL-DNVTFLGRVPKEELPELLAA 294 (394)
T ss_pred ccccCHHHHHHHHHHHhhc---CCeEEEEeCCcccH-----------HHHHHHHHHcCC-CcEEEeCCCChHHHHHHHHh
Confidence 9999999999999999643 45555 67877653 334444555554 57999999999999999999
Q ss_pred hhcCCcEEEecCCCCCC-----cHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHH
Q 001557 564 AAKTKGVFINPAFIEPF-----GLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWE 638 (1054)
Q Consensus 564 Aa~~~dv~v~ps~~Egf-----gl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~ 638 (1054)
| |++|+|+..|++ |++++|||+||+|||+++.|+..+++.++.+|+++++.|+++++++|.+++.+++.++
T Consensus 295 ~----di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~ 370 (394)
T cd03794 295 A----DVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDPEERA 370 (394)
T ss_pred h----CeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhChHHHH
Confidence 9 999999998875 8889999999999999999999999988889999999999999999999999999999
Q ss_pred HHHHHHHHHH-hcCCHHHHHHHHH
Q 001557 639 RCRQNGLKNI-HQFSWPEHCKSYL 661 (1054)
Q Consensus 639 ~~~~~~~~~v-~~fsw~~~a~~yl 661 (1054)
++++++++.+ ++|||+.++++|+
T Consensus 371 ~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 371 EMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHHHHHHhhcHHHHHHhcC
Confidence 9999999999 5999999998873
No 42
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=9.8e-31 Score=299.07 Aligned_cols=361 Identities=23% Similarity=0.293 Sum_probs=258.9
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccccccc
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 246 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 246 (1054)
||++|+.... |..||...++..|+++|.+. | |+|++++.....+...
T Consensus 1 kIl~i~~~~~-----------p~~~G~~~~~~~l~~~L~~~-g-~~v~~~~~~~~~~~~~-------------------- 47 (364)
T cd03814 1 RIAIVTDTFL-----------PQVNGVVRTLQRLVEHLRAR-G-HEVLVIAPGPFRESEG-------------------- 47 (364)
T ss_pred CeEEEecccC-----------ccccceehHHHHHHHHHHHC-C-CEEEEEeCCchhhccC--------------------
Confidence 6899986332 56699999999999999999 8 9999999753211100
Q ss_pred ccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCC-CchHHHHHHH
Q 001557 247 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYA-DAGDAAALLS 325 (1054)
Q Consensus 247 ~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~-~a~~~a~~l~ 325 (1054)
......+..++...... . ...... ...+.+.+. ..+||+||+|.. ..+..+..++
T Consensus 48 ---~~~~~~~~~~~~~~~~~-~--~~~~~~-----------~~~~~~~~~-------~~~pdii~~~~~~~~~~~~~~~~ 103 (364)
T cd03814 48 ---PARVVPVPSVPLPGYPE-I--RLALPP-----------RRRVRRLLD-------AFAPDVVHIATPGPLGLAALRAA 103 (364)
T ss_pred ---CCCceeecccccCcccc-e--Eecccc-----------hhhHHHHHH-------hcCCCEEEEeccchhhHHHHHHH
Confidence 00122222222211100 0 000000 001111111 156999999875 3455666777
Q ss_pred ccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHH
Q 001557 326 GALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1054)
Q Consensus 326 ~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~ 405 (1054)
+..++|++++.|+.+........ .. ....+.. ..++..++.+|.+++.|+...+.+...+
T Consensus 104 ~~~~~~~i~~~~~~~~~~~~~~~-----~~----~~~~~~~--~~~~~~~~~~d~i~~~s~~~~~~~~~~~--------- 163 (364)
T cd03814 104 RRLGIPVVTSYHTDFPEYLRYYG-----LG----PLSWLAW--AYLRWFHNRADRVLVPSPSLADELRARG--------- 163 (364)
T ss_pred HHcCCCEEEEEecChHHHhhhcc-----cc----hHhHhhH--HHHHHHHHhCCEEEeCCHHHHHHHhccC---------
Confidence 78899999999987553321110 00 0111111 1245568899999999998766332211
Q ss_pred HHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCC
Q 001557 406 KLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPD 485 (1054)
Q Consensus 406 ~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld 485 (1054)
.+++.++|+|+|...|.+..... .....+. .++++.|+++|++.
T Consensus 164 ----------------~~~~~~~~~g~~~~~~~~~~~~~-------------------~~~~~~~-~~~~~~i~~~G~~~ 207 (364)
T cd03814 164 ----------------FRRVRLWPRGVDTELFHPRRRDE-------------------ALRARLG-PPDRPVLLYVGRLA 207 (364)
T ss_pred ----------------CCceeecCCCccccccCcccccH-------------------HHHHHhC-CCCCeEEEEEeccc
Confidence 12789999999998886532110 1111222 35678899999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHh
Q 001557 486 PKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLA 564 (1054)
Q Consensus 486 ~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A 564 (1054)
+.||++.+++++..+... +++.+ ++|.+++.+. +. +...+|.|.|+++.+++..+|+.|
T Consensus 208 ~~k~~~~~i~~~~~l~~~---~~~~l~i~G~~~~~~~-----------~~------~~~~~v~~~g~~~~~~~~~~~~~~ 267 (364)
T cd03814 208 PEKNLEALLDADLPLRRR---PPVRLVIVGDGPARAR-----------LE------ARYPNVHFLGFLDGEELAAAYASA 267 (364)
T ss_pred cccCHHHHHHHHHHhhhc---CCceEEEEeCCchHHH-----------Hh------ccCCcEEEEeccCHHHHHHHHHhC
Confidence 999999999999999653 45554 7787764221 11 445789999999999999999999
Q ss_pred hcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Q 001557 565 AKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNG 644 (1054)
Q Consensus 565 a~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~ 644 (1054)
|++|+|+..|+||++++||||||+|||+++.|+..+++.++.+|+++++.|.++++++|.+++.+++.+.++.+++
T Consensus 268 ----d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~ 343 (364)
T cd03814 268 ----DVFVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADPELRRRMAARA 343 (364)
T ss_pred ----CEEEECcccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999899999999999999999999999999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHHH
Q 001557 645 LKNIHQFSWPEHCKSYLSRI 664 (1054)
Q Consensus 645 ~~~v~~fsw~~~a~~yl~~l 664 (1054)
++.++.|+|+.++++++++|
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 344 RAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHHHhhcCHHHHHHHHHHhh
Confidence 99998999999999999887
No 43
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=100.00 E-value=1.4e-30 Score=297.68 Aligned_cols=286 Identities=24% Similarity=0.272 Sum_probs=218.3
Q ss_pred CcceEEEEcCC--CchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEE
Q 001557 305 IWPVAIHGHYA--DAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVI 382 (1054)
Q Consensus 305 ~~pDVIh~h~~--~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi 382 (1054)
.+||+||+|.. .....+..+++..++|+|++.|+....... . . ....+.......+...+..++.++
T Consensus 86 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~-----~---~~~~~~~~~~~~~~~~~~~~~~i~ 154 (375)
T cd03821 86 READIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWAL---P-----H---KALKKRLAWFLFERRLLQAAAAVH 154 (375)
T ss_pred CCCCEEEEecccchHHHHHHHHHHHhCCCEEEEcccccccccc---c-----c---chhhhHHHHHHHHHHHHhcCCEEE
Confidence 46999999973 334455556667899999999987443311 0 0 001111122223556788999999
Q ss_pred ecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCch
Q 001557 383 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPI 462 (1054)
Q Consensus 383 ~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1054)
+++..........+. ..++.+||||+|.+.|.+.....
T Consensus 155 ~~s~~~~~~~~~~~~------------------------~~~~~vi~~~~~~~~~~~~~~~~------------------ 192 (375)
T cd03821 155 ATSEQEAAEIRRLGL------------------------KAPIAVIPNGVDIPPFAALPSRG------------------ 192 (375)
T ss_pred ECCHHHHHHHHhhCC------------------------cccEEEcCCCcChhccCcchhhh------------------
Confidence 999766554432211 12899999999998886432110
Q ss_pred hHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcC
Q 001557 463 WSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYD 541 (1054)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~ 541 (1054)
....+....++++|+++||+.+.||++.+++|+..+... .+++.+ ++|.++.. ....+..++.+++
T Consensus 193 --~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~--~~~~~l~i~G~~~~~---------~~~~~~~~~~~~~ 259 (375)
T cd03821 193 --RRRKFPILPDKRIILFLGRLHPKKGLDLLIEAFAKLAER--FPDWHLVIAGPDEGG---------YRAELKQIAAALG 259 (375)
T ss_pred --hhhhccCCCCCcEEEEEeCcchhcCHHHHHHHHHHhhhh--cCCeEEEEECCCCcc---------hHHHHHHHHHhcC
Confidence 012233346788999999999999999999999999643 345554 67775431 1234445568889
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHH
Q 001557 542 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQ 621 (1054)
Q Consensus 542 l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~ 621 (1054)
+.++|.|+|+++.+++..+|+.| |++|+||..|+||++++||||||+|||+++.||..+++.+ ..|+++++ +.+
T Consensus 260 ~~~~v~~~g~~~~~~~~~~~~~a----dv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~ 333 (375)
T cd03821 260 LEDRVTFTGMLYGEDKAAALADA----DLFVLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVD 333 (375)
T ss_pred ccceEEEcCCCChHHHHHHHhhC----CEEEeccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChH
Confidence 98999999999999999999999 9999999999999999999999999999999999999987 78888864 669
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHH
Q 001557 622 SIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLS 662 (1054)
Q Consensus 622 ~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~ 662 (1054)
+++++|.+++++++.++++++++++.+ ++|+|+..+++|++
T Consensus 334 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 375 (375)
T cd03821 334 ALAAALRRALELPQRLKAMGENGRALVEERFSWTAIAQQLLE 375 (375)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHhhC
Confidence 999999999999999999999999997 79999999998863
No 44
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=100.00 E-value=1.9e-30 Score=297.03 Aligned_cols=268 Identities=22% Similarity=0.310 Sum_probs=218.6
Q ss_pred CcceEEEEcCC-CchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEe
Q 001557 305 IWPVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 383 (1054)
Q Consensus 305 ~~pDVIh~h~~-~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~ 383 (1054)
.+||+||+|+. ....++.+.++..++|++++.|+....... . . ..++..++.+|.|++
T Consensus 78 ~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~------~-------~~~~~~~~~~~~vi~ 136 (355)
T cd03799 78 LGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRSP--------D------A-------IDLDEKLARADFVVA 136 (355)
T ss_pred cCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccccC--------c------h-------HHHHHHHhhCCEEEE
Confidence 56999999986 444555555656689999999964321100 0 0 123456889999999
Q ss_pred cCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchh
Q 001557 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIW 463 (1054)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1054)
+|+...+.+...+.. ...++.++|||+|.+.|.+..
T Consensus 137 ~s~~~~~~l~~~~~~----------------------~~~~~~vi~~~~d~~~~~~~~---------------------- 172 (355)
T cd03799 137 ISEYNRQQLIRLLGC----------------------DPDKIHVVHCGVDLERFPPRP---------------------- 172 (355)
T ss_pred CCHHHHHHHHHhcCC----------------------CcccEEEEeCCcCHHHcCCcc----------------------
Confidence 999888876655421 123899999999988776421
Q ss_pred HHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCC
Q 001557 464 SEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDL 542 (1054)
Q Consensus 464 ~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l 542 (1054)
.....+++.|+++|++.+.||++.+++++..+... .+++.+ ++|.++. ...+...+.++++
T Consensus 173 -----~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~--~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~ 234 (355)
T cd03799 173 -----PPPPGEPLRILSVGRLVEKKGLDYLLEALALLKDR--GIDFRLDIVGDGPL-----------RDELEALIAELGL 234 (355)
T ss_pred -----ccccCCCeEEEEEeeeccccCHHHHHHHHHHHhhc--CCCeEEEEEECCcc-----------HHHHHHHHHHcCC
Confidence 00124567899999999999999999999998643 356665 7788765 3456677788888
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCC------CCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeC
Q 001557 543 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFI------EPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVD 616 (1054)
Q Consensus 543 ~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~------Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~ 616 (1054)
.++|.|.|+++.+++..+|+.| |++|+|+.. |+||++++||||||+|||+++.|+..+++.++.+|++++
T Consensus 235 ~~~v~~~g~~~~~~l~~~~~~a----di~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~ 310 (355)
T cd03799 235 EDRVTLLGAKSQEEVRELLRAA----DLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVP 310 (355)
T ss_pred CCeEEECCcCChHHHHHHHHhC----CEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeC
Confidence 8999999999999999999999 999999998 999999999999999999999999999999988999999
Q ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHH
Q 001557 617 PHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKS 659 (1054)
Q Consensus 617 p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~ 659 (1054)
+.|+++++++|.+++++++.+.++++++++.+ +.|||+..+++
T Consensus 311 ~~~~~~l~~~i~~~~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 311 PGDPEALADAIERLLDDPELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 99999999999999999999999999999999 69999998865
No 45
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.98 E-value=6.2e-30 Score=292.57 Aligned_cols=371 Identities=25% Similarity=0.346 Sum_probs=261.9
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccccccc
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 246 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 246 (1054)
||++++.. + +|..||...++.+++++|++. | |+|++++..........
T Consensus 1 kil~~~~~-~----------~p~~~G~~~~~~~l~~~L~~~-g-~~v~v~~~~~~~~~~~~------------------- 48 (374)
T cd03817 1 KIGIFTDT-Y----------LPQVNGVATSIRRLAEELEKR-G-HEVYVVAPSYPGAPEEE------------------- 48 (374)
T ss_pred CeeEeehh-c----------cCCCCCeehHHHHHHHHHHHc-C-CeEEEEeCCCCCCCccc-------------------
Confidence 58888863 3 378899999999999999999 8 99999997532111000
Q ss_pred ccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCC-CchHHHHHHH
Q 001557 247 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYA-DAGDAAALLS 325 (1054)
Q Consensus 247 ~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~-~a~~~a~~l~ 325 (1054)
...+......+.. .+ ....+.. .+... +.+.+. ..+||+||+|.. ..+..+..++
T Consensus 49 ---~~~~~~~~~~~~~---~~--~~~~~~~--~~~~~-------~~~~~~-------~~~~Div~~~~~~~~~~~~~~~~ 104 (374)
T cd03817 49 ---EVVVVRPFRVPTF---KY--PDFRLPL--PIPRA-------LIIILK-------ELGPDIVHTHTPFSLGLLGLRVA 104 (374)
T ss_pred ---ccccccccccccc---hh--hhhhccc--cHHHH-------HHHHHh-------hcCCCEEEECCchhhhhHHHHHH
Confidence 0001111111000 00 0000100 01011 111111 156999999985 3456667778
Q ss_pred ccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHH
Q 001557 326 GALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1054)
Q Consensus 326 ~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~ 405 (1054)
+..++|+|++.|+.......... .+... ......+ ..++..+..+|.|++.|+...+.+.. +..
T Consensus 105 ~~~~~~~i~~~~~~~~~~~~~~~-~~~~~------~~~~~~~-~~~~~~~~~~d~i~~~s~~~~~~~~~-~~~------- 168 (374)
T cd03817 105 RKLGIPVVATYHTMYEDYTHYVP-LGRLL------ARAVVRR-KLSRRFYNRCDAVIAPSEKIADLLRE-YGV------- 168 (374)
T ss_pred HHcCCCEEEEecCCHHHHHHHHh-cccch------hHHHHHH-HHHHHHhhhCCEEEeccHHHHHHHHh-cCC-------
Confidence 88899999999987653322221 11100 0011110 24667899999999999976655432 211
Q ss_pred HHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCC
Q 001557 406 KLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPD 485 (1054)
Q Consensus 406 ~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld 485 (1054)
. .++.++|+|+|...|.+.... ..+..+...++.+.|+++|++.
T Consensus 169 ---------------~-~~~~vi~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~i~~~G~~~ 212 (374)
T cd03817 169 ---------------K-RPIEVIPTGIDLDRFEPVDGD--------------------DERRKLGIPEDEPVLLYVGRLA 212 (374)
T ss_pred ---------------C-CceEEcCCccchhccCccchh--------------------HHHHhcCCCCCCeEEEEEeeee
Confidence 1 168999999999887643211 0122233346678899999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHh
Q 001557 486 PKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLA 564 (1054)
Q Consensus 486 ~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A 564 (1054)
+.||++.+++++..+... .+++.+ ++|+++. ...+..++.++++.++|.|+|+++.+++..+|+.|
T Consensus 213 ~~k~~~~l~~~~~~~~~~--~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a 279 (374)
T cd03817 213 KEKNIDFLIRAFARLLKE--EPDVKLVIVGDGPE-----------REELEELARELGLADRVIFTGFVPREELPDYYKAA 279 (374)
T ss_pred cccCHHHHHHHHHHHHHh--CCCeEEEEEeCCch-----------HHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHc
Confidence 999999999999998643 345665 6677653 34566778888888999999999999999999999
Q ss_pred hcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Q 001557 565 AKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNG 644 (1054)
Q Consensus 565 a~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~ 644 (1054)
|++++|+..|++|++++|||+||+|||+++.|+..+++.++.+|+++++.+. +++++|.+++++++.++++++++
T Consensus 280 ----d~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~~~~~~~~~~ 354 (374)
T cd03817 280 ----DLFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPELRRRLSKNA 354 (374)
T ss_pred ----CEEEecccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998888 99999999999999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHHH
Q 001557 645 LKNIHQFSWPEHCKSYLSRISS 666 (1054)
Q Consensus 645 ~~~v~~fsw~~~a~~yl~~l~~ 666 (1054)
++.+++++ +++.+.++|++
T Consensus 355 ~~~~~~~~---~~~~~~~~~~~ 373 (374)
T cd03817 355 EESAEKFS---FAKKVEKLYEE 373 (374)
T ss_pred HHHHHHHH---HHHHHHHHHhc
Confidence 99997665 55566665543
No 46
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.98 E-value=1.1e-30 Score=305.83 Aligned_cols=284 Identities=19% Similarity=0.190 Sum_probs=206.4
Q ss_pred CcceEEEEcCCCchHHHHHHH-ccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHH--HHHHHHHHhhhccCCEE
Q 001557 305 IWPVAIHGHYADAGDAAALLS-GALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKI--MRRIEAEELSLDASEIV 381 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~-~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~--~~ri~~E~~~l~~ad~V 381 (1054)
.++|+||+++...+ .++. ...++|+|++.|++....+.++......... ..|++ ......|+.+++.+|.|
T Consensus 103 ~~~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~e~~~~~~ad~v 176 (397)
T TIGR03087 103 EPVDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWPLR---WIYRREGRLLLAYERAIAARFDAA 176 (397)
T ss_pred CCCCEEEEeccccc---eeccccccCCCeEeehhhHHHHHHHHHHhccCcchh---HHHHHHHHHHHHHHHHHHhhCCeE
Confidence 45999999975322 2222 3458999999999865554443322221111 11211 11123488899999999
Q ss_pred EecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCc
Q 001557 382 ITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPP 461 (1054)
Q Consensus 382 i~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1054)
+++|+.+.+.+.+.+.. ...++.+||||+|.+.|.+.....
T Consensus 177 i~~S~~~~~~l~~~~~~----------------------~~~~v~vipngvd~~~f~~~~~~~----------------- 217 (397)
T TIGR03087 177 TFVSRAEAELFRRLAPE----------------------AAGRITAFPNGVDADFFSPDRDYP----------------- 217 (397)
T ss_pred EEcCHHHHHHHHHhCCC----------------------CCCCeEEeecccchhhcCCCcccc-----------------
Confidence 99999888766543321 112799999999999887532110
Q ss_pred hhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHH----HHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHH
Q 001557 462 IWSEIMHFFSNPRKPMILALARPDPKKNITTLVK----AFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKL 536 (1054)
Q Consensus 462 ~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~----A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l 536 (1054)
.. ..+++++|+|+||+++.||++.++. ++..+.+ ..+++.+ |+|+++. ..
T Consensus 218 -----~~--~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~--~~p~~~l~ivG~g~~------------~~---- 272 (397)
T TIGR03087 218 -----NP--YPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRA--RRPAAEFYIVGAKPS------------PA---- 272 (397)
T ss_pred -----CC--CCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHH--HCCCcEEEEECCCCh------------HH----
Confidence 00 0245689999999999999999884 4555543 2345554 7788763 11
Q ss_pred HHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC-CCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEe
Q 001557 537 IDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLV 615 (1054)
Q Consensus 537 ~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~-~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv 615 (1054)
+.++...++|.|.|+++ ++..+|+.| |++|+|+. .||+|++++||||||+|||+|+.|+. .+....++|+++
T Consensus 273 ~~~l~~~~~V~~~G~v~--~~~~~~~~a----dv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv 345 (397)
T TIGR03087 273 VRALAALPGVTVTGSVA--DVRPYLAHA----AVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLV 345 (397)
T ss_pred HHHhccCCCeEEeeecC--CHHHHHHhC----CEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEe
Confidence 22333456799999985 799999999 99999996 69999999999999999999997542 333344679999
Q ss_pred CCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHH
Q 001557 616 DPHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISS 666 (1054)
Q Consensus 616 ~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~~ 666 (1054)
. .|+++++++|.++++|++.++++++++++.+ ++|||+.++++|.++|..
T Consensus 346 ~-~~~~~la~ai~~ll~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~~ 396 (397)
T TIGR03087 346 A-ADPADFAAAILALLANPAEREELGQAARRRVLQHYHWPRNLARLDALLEQ 396 (397)
T ss_pred C-CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcC
Confidence 6 8999999999999999999999999999999 699999999999998864
No 47
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.98 E-value=2.9e-30 Score=296.35 Aligned_cols=344 Identities=19% Similarity=0.194 Sum_probs=245.5
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccccccc
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 246 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 246 (1054)
||++++.. + ..||..+++.+++++|++. | |+|++++...... ...
T Consensus 1 kIl~~~~~-~------------~~GG~~~~~~~l~~~L~~~-~-~~v~~i~~~~~~~-------~~~------------- 45 (358)
T cd03812 1 KILHIVGT-M------------NRGGIETFIMNYYRNLDRS-K-IQFDFLVTSKEEG-------DYD------------- 45 (358)
T ss_pred CEEEEeCC-C------------CCccHHHHHHHHHHhcCcc-c-eEEEEEEeCCCCc-------chH-------------
Confidence 58888752 1 3599999999999999988 8 9999999642110 000
Q ss_pred ccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHc
Q 001557 247 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSG 326 (1054)
Q Consensus 247 ~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~ 326 (1054)
......++.+.+++.... ....+ +..+.+.+.. .+|||||+|....+.++..+++
T Consensus 46 ~~~~~~~~~~~~~~~~~~-----------~~~~~-------~~~~~~~~~~-------~~~Dvv~~~~~~~~~~~~~~~~ 100 (358)
T cd03812 46 DEIEKLGGKIYYIPARKK-----------NPLKY-------FKKLYKLIKK-------NKYDIVHVHGSSASGFILLAAK 100 (358)
T ss_pred HHHHHcCCeEEEecCCCc-----------cHHHH-------HHHHHHHHhc-------CCCCEEEEeCcchhHHHHHHHh
Confidence 001123666666443211 01111 1112222221 5699999999766666666666
Q ss_pred cCCCCE-EEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHH
Q 001557 327 ALNVPM-VFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1054)
Q Consensus 327 ~~~iP~-V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~ 405 (1054)
..+.|. +++.|+....... .. ..... ...+...++.++.++++|+...+.+... ..
T Consensus 101 ~~~~~~~v~~~~~~~~~~~~--------~~----~~~~~---~~~~~~~~~~~~~~i~~s~~~~~~~~~~---~~----- 157 (358)
T cd03812 101 KAGVKVRIAHSHNTSDSHDK--------KK----KILKY---KVLRKLINRLATDYLACSEEAGKWLFGK---VK----- 157 (358)
T ss_pred hCCCCeEEEEeccccccccc--------cc----hhhHH---HHHHHHHHhcCCEEEEcCHHHHHHHHhC---CC-----
Confidence 677776 6688876443210 00 00000 1124457888999999999877665433 11
Q ss_pred HHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCC
Q 001557 406 KLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPD 485 (1054)
Q Consensus 406 ~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld 485 (1054)
..++.+||||+|...|.+.... ..........++++.|+++||+.
T Consensus 158 ----------------~~~~~vi~ngvd~~~~~~~~~~-------------------~~~~~~~~~~~~~~~i~~vGr~~ 202 (358)
T cd03812 158 ----------------NKKFKVIPNGIDLEKFIFNEEI-------------------RKKRRELGILEDKFVIGHVGRFS 202 (358)
T ss_pred ----------------cccEEEEeccCcHHHcCCCchh-------------------hhHHHHcCCCCCCEEEEEEeccc
Confidence 1289999999999887643211 01122333456788999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHh
Q 001557 486 PKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLA 564 (1054)
Q Consensus 486 ~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A 564 (1054)
+.||++.+++|+..+.+.. +++.+ |+|+++. ...+.+.++++++.++|.|+|+ .+++..+|+.|
T Consensus 203 ~~Kg~~~li~a~~~l~~~~--~~~~l~ivG~g~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a 267 (358)
T cd03812 203 EQKNHEFLIEIFAELLKKN--PNAKLLLVGDGEL-----------EEEIKKKVKELGLEDKVIFLGV--RNDVPELLQAM 267 (358)
T ss_pred cccChHHHHHHHHHHHHhC--CCeEEEEEeCCch-----------HHHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhc
Confidence 9999999999999996433 45554 7788774 3456777888999999999998 78999999999
Q ss_pred hcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Q 001557 565 AKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNG 644 (1054)
Q Consensus 565 a~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~ 644 (1054)
|++|+||..|+||++++||||+|+|||+|+.||..+++.+ ..|++..+.++++++++|.+++++|+..+.+...+
T Consensus 268 ----di~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l~~~~~~~~~~~~~~ 342 (358)
T cd03812 268 ----DVFLFPSLYEGLPLVLIEAQASGLPCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILKLKSEDRRERSSESIK 342 (358)
T ss_pred ----CEEEecccccCCCHHHHHHHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHHHHhCcchhhhhhhhh
Confidence 9999999999999999999999999999999999999988 56677767789999999999999999888777776
Q ss_pred HHHH
Q 001557 645 LKNI 648 (1054)
Q Consensus 645 ~~~v 648 (1054)
....
T Consensus 343 ~~~~ 346 (358)
T cd03812 343 KKGL 346 (358)
T ss_pred hccc
Confidence 6654
No 48
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.98 E-value=2e-30 Score=299.52 Aligned_cols=267 Identities=17% Similarity=0.177 Sum_probs=203.7
Q ss_pred CcceEEEEcCCCchHHHHHHHccCCCC--EEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEE
Q 001557 305 IWPVAIHGHYADAGDAAALLSGALNVP--MVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVI 382 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~~~iP--~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi 382 (1054)
.+||+||+|...+..++..+++..++| ++.+.|....... .+. . ..+..+|.++
T Consensus 83 ~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~----------------~~~-~-------~~~~~~d~~i 138 (359)
T PRK09922 83 TQPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKK----------------HAE-C-------KKITCADYHL 138 (359)
T ss_pred cCCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccc----------------hhh-h-------hhhhcCCEEE
Confidence 569999999876556666666655655 4666674321110 000 0 1146899999
Q ss_pred ecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCch
Q 001557 383 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPI 462 (1054)
Q Consensus 383 ~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1054)
++|+...+.+.. + +..+ .++.+||||+|.+.+....+.
T Consensus 139 ~~S~~~~~~~~~-~-~~~~---------------------~ki~vi~N~id~~~~~~~~~~------------------- 176 (359)
T PRK09922 139 AISSGIKEQMMA-R-GISA---------------------QRISVIYNPVEIKTIIIPPPE------------------- 176 (359)
T ss_pred EcCHHHHHHHHH-c-CCCH---------------------HHEEEEcCCCCHHHccCCCcc-------------------
Confidence 999987766543 2 1222 289999999997654311100
Q ss_pred hHHHhhhcCCCCCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHH
Q 001557 463 WSEIMHFFSNPRKPMILALARPD--PKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDK 539 (1054)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vgRld--~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~ 539 (1054)
..++++|+++||+. ..||+..+++|+..+. + ++.+ ++|++++ ...+.+++++
T Consensus 177 ---------~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~---~--~~~l~ivG~g~~-----------~~~l~~~~~~ 231 (359)
T PRK09922 177 ---------RDKPAVFLYVGRLKFEGQKNVKELFDGLSQTT---G--EWQLHIIGDGSD-----------FEKCKAYSRE 231 (359)
T ss_pred ---------cCCCcEEEEEEEEecccCcCHHHHHHHHHhhC---C--CeEEEEEeCCcc-----------HHHHHHHHHH
Confidence 13467899999986 4699999999999873 2 4444 7888875 3457788899
Q ss_pred cCCCCCEEeCCCCCC--CcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcc-ccCcccceeeCCceEEeC
Q 001557 540 YDLYGQVAYPKHHKQ--SDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK-NGGPVDIHRVLDNGLLVD 616 (1054)
Q Consensus 540 ~~l~~~V~~~g~~~~--~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~-~Gg~~eiv~~~~~Gllv~ 616 (1054)
+++.++|.|+|+++. ++++.+|+.| |++|+||..||||++++||||||+|||+++ .||+.|+|.++.+|++++
T Consensus 232 ~~l~~~v~f~G~~~~~~~~~~~~~~~~----d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~ 307 (359)
T PRK09922 232 LGIEQRIIWHGWQSQPWEVVQQKIKNV----SALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYT 307 (359)
T ss_pred cCCCCeEEEecccCCcHHHHHHHHhcC----cEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEEC
Confidence 999999999998754 6889999999 999999999999999999999999999999 899999999999999999
Q ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Q 001557 617 PHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCK 668 (1054)
Q Consensus 617 p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~~ 668 (1054)
|+|+++++++|.+++++++.+ ......+.+.+|+-+..++++...|..+.
T Consensus 308 ~~d~~~la~~i~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (359)
T PRK09922 308 PGNIDEFVGKLNKVISGEVKY--QHDAIPNSIERFYEVLYFKNLNNALFSKL 357 (359)
T ss_pred CCCHHHHHHHHHHHHhCcccC--CHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 999999999999999998754 22333334478899999999999998765
No 49
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.98 E-value=1.3e-29 Score=287.39 Aligned_cols=289 Identities=27% Similarity=0.365 Sum_probs=229.3
Q ss_pred CcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEec
Q 001557 305 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 384 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~ 384 (1054)
.+||+||++.+.........++..++|++++.|+......... ......+ ....+...++.+|.+++.
T Consensus 84 ~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~----------~~~~~~~--~~~~~~~~~~~~d~~i~~ 151 (374)
T cd03801 84 ERFDVVHAHDWLALLAAALAARLLGIPLVLTVHGLEFGRPGNE----------LGLLLKL--ARALERRALRRADRIIAV 151 (374)
T ss_pred cCCcEEEEechhHHHHHHHHHHhcCCcEEEEeccchhhccccc----------hhHHHHH--HHHHHHHHHHhCCEEEEe
Confidence 4699999999766555546677789999999999765432110 0001111 111355678999999999
Q ss_pred CHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhH
Q 001557 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS 464 (1054)
Q Consensus 385 S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1054)
|+...+.+...+... ..++.++|||+|...+.+.. ..
T Consensus 152 s~~~~~~~~~~~~~~----------------------~~~~~~i~~~~~~~~~~~~~---------------------~~ 188 (374)
T cd03801 152 SEATREELRELGGVP----------------------PEKITVIPNGVDTERFRPAP---------------------RA 188 (374)
T ss_pred cHHHHHHHHhcCCCC----------------------CCcEEEecCcccccccCccc---------------------hH
Confidence 998887765554321 12899999999998775321 00
Q ss_pred HHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCC
Q 001557 465 EIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLY 543 (1054)
Q Consensus 465 ~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~ 543 (1054)
.........+.+.|+++|++.+.||++.+++|+..+.... +++.+ ++|+++. ...+..++.+++..
T Consensus 189 ~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~--~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~ 255 (374)
T cd03801 189 ARRRLGIPEDEPVILFVGRLVPRKGVDLLLEALAKLRKEY--PDVRLVIVGDGPL-----------REELEALAAELGLG 255 (374)
T ss_pred HHhhcCCcCCCeEEEEecchhhhcCHHHHHHHHHHHhhhc--CCeEEEEEeCcHH-----------HHHHHHHHHHhCCC
Confidence 1111222356789999999999999999999999986433 55665 6675543 45566677788888
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHH
Q 001557 544 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSI 623 (1054)
Q Consensus 544 ~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~l 623 (1054)
.+|.+.|+++.+++..+|+.| |++|+|+..|++|++++|||++|+|||+++.++..+++.++.+|+++++.|++++
T Consensus 256 ~~v~~~g~~~~~~~~~~~~~~----di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l 331 (374)
T cd03801 256 DRVTFLGFVPDEDLPALYAAA----DVFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEAL 331 (374)
T ss_pred cceEEEeccChhhHHHHHHhc----CEEEecchhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHH
Confidence 999999999999999999999 9999999999999999999999999999999999999998899999999999999
Q ss_pred HHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 001557 624 ADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 624 a~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~ 665 (1054)
+++|.+++++++.+.++++++++.+ +.|+|+.+++++.++|+
T Consensus 332 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (374)
T cd03801 332 AEAILRLLDDPELRRRLGEAARERVAERFSWDRVAARTEEVYY 374 (374)
T ss_pred HHHHHHHHcChHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhC
Confidence 9999999999999999999999777 79999999999998763
No 50
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.98 E-value=3.5e-30 Score=296.07 Aligned_cols=345 Identities=23% Similarity=0.216 Sum_probs=245.3
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccc
Q 001557 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 245 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~ 245 (1054)
|||++++.. +..||.++++..++++|.++ | |+|++++...
T Consensus 1 MkIl~~~~~-------------~~~gG~~~~~~~l~~~l~~~-G-~~v~v~~~~~------------------------- 40 (365)
T cd03825 1 MKVLHLNTS-------------DISGGAARAAYRLHRALQAA-G-VDSTMLVQEK------------------------- 40 (365)
T ss_pred CeEEEEecC-------------CCCCcHHHHHHHHHHHHHhc-C-CceeEEEeec-------------------------
Confidence 899999852 23489999999999999999 8 9999998531
Q ss_pred cccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHH
Q 001557 246 QGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLS 325 (1054)
Q Consensus 246 ~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~ 325 (1054)
. . + ...+ ...+|||||+|+...+.+.....
T Consensus 41 -------~----------~--------~-----------~~~~--------------~~~~~diih~~~~~~~~~~~~~~ 70 (365)
T cd03825 41 -------K----------A--------L-----------ISKI--------------EIINADIVHLHWIHGGFLSIEDL 70 (365)
T ss_pred -------c----------h--------h-----------hhCh--------------hcccCCEEEEEccccCccCHHHH
Confidence 0 0 0 0000 11569999999865444333333
Q ss_pred cc--CCCCEEEEeCCCccchHHHHHH--------hCC---CC--hhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHH
Q 001557 326 GA--LNVPMVFTGHSLGRDKLEQLLK--------QGR---LS--RDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIE 390 (1054)
Q Consensus 326 ~~--~~iP~V~t~H~l~~~~~~~l~~--------~g~---~~--~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~ 390 (1054)
.. .++|+|+|.|+.+......... .+. .. ...........++. .......++.++++|+...+
T Consensus 71 ~~~~~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~s~~~~~ 148 (365)
T cd03825 71 SKLLDRKPVVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRK--RKAWADLNLTIVAPSRWLAD 148 (365)
T ss_pred HHHHcCCCEEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHH--HHHhccCCcEEEehhHHHHH
Confidence 23 3999999999875432110000 000 00 00000011111111 11123567788888886655
Q ss_pred HHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhc
Q 001557 391 EQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFF 470 (1054)
Q Consensus 391 ~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (1054)
.....+. + ...++.++|||+|.+.|.+... ......+.
T Consensus 149 ~~~~~~~-~---------------------~~~~~~vi~ngi~~~~~~~~~~--------------------~~~~~~~~ 186 (365)
T cd03825 149 CARSSSL-F---------------------KGIPIEVIPNGIDTTIFRPRDK--------------------REARKRLG 186 (365)
T ss_pred HHHhccc-c---------------------CCCceEEeCCCCcccccCCCcH--------------------HHHHHHhC
Confidence 5433321 1 1138999999999988764321 11123333
Q ss_pred CCCCCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEE
Q 001557 471 SNPRKPMILALARPDP--KKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVA 547 (1054)
Q Consensus 471 ~~~~~~~Il~vgRld~--~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~ 547 (1054)
.+++.+++++.|+... .||++.+++|+..+... ..+++.+ ++|+++... ..++..+|.
T Consensus 187 ~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~-~~~~~~~~i~G~~~~~~------------------~~~~~~~v~ 247 (365)
T cd03825 187 LPADKKIILFGAVGGTDPRKGFDELIEALKRLAER-WKDDIELVVFGASDPEI------------------PPDLPFPVH 247 (365)
T ss_pred CCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhc-cCCCeEEEEeCCCchhh------------------hccCCCceE
Confidence 4556677777777765 89999999999988542 2356665 667665311 014456899
Q ss_pred eCCCCC-CCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHH
Q 001557 548 YPKHHK-QSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADA 626 (1054)
Q Consensus 548 ~~g~~~-~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~a 626 (1054)
|+|+++ .+++..+|+.| |++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|+++++++
T Consensus 248 ~~g~~~~~~~~~~~~~~a----d~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~ 323 (365)
T cd03825 248 YLGSLNDDESLALIYSAA----DVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEG 323 (365)
T ss_pred ecCCcCCHHHHHHHHHhC----CEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHH
Confidence 999998 77899999999 9999999999999999999999999999999999999998889999999999999999
Q ss_pred HHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHh
Q 001557 627 LLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISSC 667 (1054)
Q Consensus 627 I~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~~~ 667 (1054)
|.+++.+++.+.++++++++.+ +.|||+.++++|+++|+++
T Consensus 324 l~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 324 IEWLLADPDEREELGEAARELAENEFDSRVQAKRYLSLYEEL 365 (365)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 9999999999999999999998 6899999999999999863
No 51
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.98 E-value=3.4e-30 Score=294.99 Aligned_cols=282 Identities=25% Similarity=0.386 Sum_probs=217.9
Q ss_pred CcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEec
Q 001557 305 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 384 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~ 384 (1054)
.+||+||+++...... +..++|+|+++|++.+....... ... .....+. .++.+++.+|.++++
T Consensus 84 ~~~Dii~~~~~~~~~~-----~~~~~~~i~~~hd~~~~~~~~~~-----~~~----~~~~~~~--~~~~~~~~~d~~i~~ 147 (365)
T cd03809 84 LGLDLLHSPHNTAPLL-----RLRGVPVVVTIHDLIPLRFPEYF-----SPG----FRRYFRR--LLRRALRRADAIITV 147 (365)
T ss_pred cCCCeeeecccccCcc-----cCCCCCEEEEeccchhhhCcccC-----CHH----HHHHHHH--HHHHHHHHcCEEEEc
Confidence 4699999998754443 56799999999998654422111 000 1111222 256689999999999
Q ss_pred CHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhH
Q 001557 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS 464 (1054)
Q Consensus 385 S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1054)
|+...+.+...|.. .+. ++.++|||+|...+.+.... .
T Consensus 148 s~~~~~~~~~~~~~-~~~---------------------~~~vi~~~~~~~~~~~~~~~------------------~-- 185 (365)
T cd03809 148 SEATKRDLLRYLGV-PPD---------------------KIVVIPLGVDPRFRPPPAEA------------------E-- 185 (365)
T ss_pred cHHHHHHHHHHhCc-CHH---------------------HEEeeccccCccccCCCchH------------------H--
Confidence 99888887666542 121 89999999999877642100 0
Q ss_pred HHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCC
Q 001557 465 EIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYG 544 (1054)
Q Consensus 465 ~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~ 544 (1054)
.......++++.|+++||+.+.||++.+++++..+....+...+ +++|.+..... .....+.+.++..
T Consensus 186 -~~~~~~~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l-~i~G~~~~~~~----------~~~~~~~~~~~~~ 253 (365)
T cd03809 186 -VLRALYLLPRPYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKL-VIVGKRGWLNE----------ELLARLRELGLGD 253 (365)
T ss_pred -HHHHhcCCCCCeEEEeCCCccccCHHHHHHHHHHHHHhcCCCCE-EEecCCccccH----------HHHHHHHHcCCCC
Confidence 11222346778999999999999999999999999754332333 36676543221 1222235678888
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHH
Q 001557 545 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIA 624 (1054)
Q Consensus 545 ~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la 624 (1054)
+|.++|+++.+++..+|+.| |++|+|+..|+||++++|||++|+|||+++.|+..|++. .+|+++++.|+++++
T Consensus 254 ~v~~~g~~~~~~~~~~~~~~----d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~ 327 (365)
T cd03809 254 RVRFLGYVSDEELAALYRGA----RAFVFPSLYEGFGLPVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALA 327 (365)
T ss_pred eEEECCCCChhHHHHHHhhh----hhhcccchhccCCCCHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHH
Confidence 99999999999999999999 999999999999999999999999999999999999974 579999999999999
Q ss_pred HHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 001557 625 DALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLS 662 (1054)
Q Consensus 625 ~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~ 662 (1054)
++|.+++.+++.+.++++++++.++.|+|+.++++|++
T Consensus 328 ~~i~~l~~~~~~~~~~~~~~~~~~~~~sw~~~~~~~~~ 365 (365)
T cd03809 328 AAIERLLEDPALREELRERGLARAKRFSWEKTARRTLD 365 (365)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHhC
Confidence 99999999999999999999987789999999998863
No 52
>PLN02949 transferase, transferring glycosyl groups
Probab=99.97 E-value=3.5e-29 Score=295.57 Aligned_cols=412 Identities=16% Similarity=0.177 Sum_probs=271.0
Q ss_pred hhhhhccCcceEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCce--EEEEEecCcCCCCCCCccCCcc
Q 001557 156 NWAIQYKEKKLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVY--RVDLLTRQVSAPDVDWTYAEPS 233 (1054)
Q Consensus 156 ~~~~~~~~~~mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~--~V~vvt~~~~~p~~~~~~~~~~ 233 (1054)
.|-.....++++|+++.++ + ...||.++.+.+.+++|.+. | + .|.++|...+ + +. .
T Consensus 24 ~~~~~~~~~~~~v~f~HP~-~-----------~~ggG~ERvl~~a~~~l~~~-~-~~~~v~iyt~~~d-~----~~---~ 81 (463)
T PLN02949 24 SVLRARRSRKRAVGFFHPY-T-----------NDGGGGERVLWCAVRAIQEE-N-PDLDCVIYTGDHD-A----SP---D 81 (463)
T ss_pred HHHhcccCCCcEEEEECCC-C-----------CCCCChhhHHHHHHHHHHhh-C-CCCeEEEEcCCCC-C----CH---H
Confidence 3445556678899999663 1 12369999999999999998 6 6 7888886532 1 11 1
Q ss_pred cccccccccccccccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEc
Q 001557 234 EMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGH 313 (1054)
Q Consensus 234 ~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h 313 (1054)
+.+... .+.|.-++. ....++++..+ .++ ....||++.-+ ...++.+....+.+.. ..|||+.-.
T Consensus 82 ~~l~~~-~~~~~i~~~--~~~~~v~l~~~---~~~-~~~~~~~~t~~-~~~~~~~~l~~~~~~~-------~~p~v~vDt 146 (463)
T PLN02949 82 SLAARA-RDRFGVELL--SPPKVVHLRKR---KWI-EEETYPRFTMI-GQSLGSVYLAWEALCK-------FTPLYFFDT 146 (463)
T ss_pred HHHHHH-HhhcceecC--CCceEEEeccc---ccc-ccccCCceehH-HHHHHHHHHHHHHHHh-------cCCCEEEeC
Confidence 111000 001111111 12233333211 334 33456664322 2223333322233322 236544433
Q ss_pred CC-CchHHHHHHHccCCCCEEEEeCCCccch--HHHHHHhCC--------CChhh-hhhHhHHHHHHH--HHHhhhccCC
Q 001557 314 YA-DAGDAAALLSGALNVPMVFTGHSLGRDK--LEQLLKQGR--------LSRDE-INTTYKIMRRIE--AEELSLDASE 379 (1054)
Q Consensus 314 ~~-~a~~~a~~l~~~~~iP~V~t~H~l~~~~--~~~l~~~g~--------~~~~~-i~~~~~~~~ri~--~E~~~l~~ad 379 (1054)
.. ..++. +.+..++|+++++|...-.. +... ..+. ..... ......+.++.. .++++.+.||
T Consensus 147 ~~~~~~~p---l~~~~~~~v~~yvH~p~~~~dm~~~v-~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad 222 (463)
T PLN02949 147 SGYAFTYP---LARLFGCKVVCYTHYPTISSDMISRV-RDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAH 222 (463)
T ss_pred CCcccHHH---HHHhcCCcEEEEEeCCcchHHHHHHH-hhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCC
Confidence 22 12222 22345899999999532111 1110 0000 00000 011111111211 3677889999
Q ss_pred EEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCC
Q 001557 380 IVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPD 459 (1054)
Q Consensus 380 ~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~ 459 (1054)
.|+++|+...+.+.+.+.. + .++.+++||+|...+......
T Consensus 223 ~ii~nS~~t~~~l~~~~~~--~---------------------~~i~vvyp~vd~~~~~~~~~~---------------- 263 (463)
T PLN02949 223 LAMVNSSWTKSHIEALWRI--P---------------------ERIKRVYPPCDTSGLQALPLE---------------- 263 (463)
T ss_pred EEEECCHHHHHHHHHHcCC--C---------------------CCeEEEcCCCCHHHcccCCcc----------------
Confidence 9999999887776544422 1 278999999998766321100
Q ss_pred CchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhccccc--CCCcEEE-EEecCCCchhhhhchHHHHHHHHHH
Q 001557 460 PPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLR--ELANLTL-IMGNRDDIDEMSGTNAALLLSILKL 536 (1054)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~--~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l 536 (1054)
..++.++|+++||+.+.||++.+|+||..+.+.. ..+++.| |+|++.. .++.++..+++++
T Consensus 264 -----------~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~-----~~~~~~~~eL~~l 327 (463)
T PLN02949 264 -----------RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRN-----KEDEERLQKLKDR 327 (463)
T ss_pred -----------ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCC-----cccHHHHHHHHHH
Confidence 0134678999999999999999999999875421 2345655 6777642 1224567789999
Q ss_pred HHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc-cceee---CCce
Q 001557 537 IDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV-DIHRV---LDNG 612 (1054)
Q Consensus 537 ~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~-eiv~~---~~~G 612 (1054)
++++++.++|.|+|+++.+++..+|+.| +++|+|+..|+||++++||||||+|||+++.||+. |++.+ +.+|
T Consensus 328 a~~l~L~~~V~f~g~v~~~el~~ll~~a----~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG 403 (463)
T PLN02949 328 AKELGLDGDVEFHKNVSYRDLVRLLGGA----VAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTG 403 (463)
T ss_pred HHHcCCCCcEEEeCCCCHHHHHHHHHhC----cEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCccc
Confidence 9999999999999999999999999999 99999999999999999999999999999999975 77765 5689
Q ss_pred EEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhh
Q 001557 613 LLVDPHDQQSIADALLKLVS-DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQ 669 (1054)
Q Consensus 613 llv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~~~ 669 (1054)
++++ |+++++++|.++++ +++.++++++++++.+++|||+..+++|.+.+..+.+
T Consensus 404 ~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~~ 459 (463)
T PLN02949 404 FLAT--TVEEYADAILEVLRMRETERLEIAAAARKRANRFSEQRFNEDFKDAIRPILN 459 (463)
T ss_pred ccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh
Confidence 9985 99999999999998 5788889999999999889999999999999987764
No 53
>PLN02846 digalactosyldiacylglycerol synthase
Probab=99.97 E-value=9.3e-30 Score=296.13 Aligned_cols=379 Identities=16% Similarity=0.129 Sum_probs=242.1
Q ss_pred CcceEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccc
Q 001557 163 EKKLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTE 242 (1054)
Q Consensus 163 ~~~mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~ 242 (1054)
.++|||+++|.-++ |..+|....+..++..|+++ |-|+|+||++.....+....|+. +.. .....
T Consensus 2 ~~~mrIaivTdt~l-----------P~vnGva~s~~~~a~~L~~~-G~heV~vvaP~~~~~~~~~~~~~--~~~-f~~~~ 66 (462)
T PLN02846 2 QKKQHIAIFTTASL-----------PWMTGTAVNPLFRAAYLAKD-GDREVTLVIPWLSLKDQKLVYPN--KIT-FSSPS 66 (462)
T ss_pred CCCCEEEEEEcCCC-----------CCCCCeeccHHHHHHHHHhc-CCcEEEEEecCCccccccccccc--ccc-ccCch
Confidence 35799999997443 88999999999999999999 73499999975421110001110 000 00000
Q ss_pred ccccccCCCCCeEEEEccCCCCCcccc-----cccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCC-C
Q 001557 243 NLMQGLGESSGAYIIRIPFGPKDKYVQ-----KELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYA-D 316 (1054)
Q Consensus 243 ~~~~~~~~~~g~~i~rip~g~~~~~l~-----k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~-~ 316 (1054)
.....+.+..+-++.++|.-+...|-. ...+++. . .+.+.+.+ .+|||||.|.+ .
T Consensus 67 ~~e~~~~~~~~~~v~r~~s~~~p~yp~r~~~~~r~~~~~-----~-------~i~~~l~~-------~~pDVIHv~tP~~ 127 (462)
T PLN02846 67 EQEAYVRQWLEERISFLPKFSIKFYPGKFSTDKRSILPV-----G-------DISETIPD-------EEADIAVLEEPEH 127 (462)
T ss_pred hhhhhhhhhccCeEEEecccccccCcccccccccccCCh-----H-------HHHHHHHh-------cCCCEEEEcCchh
Confidence 000011111233555555433311111 1111111 1 12222222 67999999986 4
Q ss_pred chHH--HHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHh
Q 001557 317 AGDA--AALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWR 394 (1054)
Q Consensus 317 a~~~--a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~ 394 (1054)
.|.. +...++++++ +|.+.|.-..+..... ..|...........++++| .++|.|++.|....+ +.+
T Consensus 128 LG~~~~g~~~~~k~~~-vV~tyHT~y~~Y~~~~-~~g~~~~~l~~~~~~~~~r--------~~~d~vi~pS~~~~~-l~~ 196 (462)
T PLN02846 128 LTWYHHGKRWKTKFRL-VIGIVHTNYLEYVKRE-KNGRVKAFLLKYINSWVVD--------IYCHKVIRLSAATQD-YPR 196 (462)
T ss_pred hhhHHHHHHHHhcCCc-EEEEECCChHHHHHHh-ccchHHHHHHHHHHHHHHH--------HhcCEEEccCHHHHH-Hhh
Confidence 4554 6666766655 8889998544333221 1111111011111222222 248999999974332 210
Q ss_pred hhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCC
Q 001557 395 LYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPR 474 (1054)
Q Consensus 395 ~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (1054)
.+.+.++|||.+.|.+.... .. ......+
T Consensus 197 -----------------------------~~i~~v~GVd~~~f~~~~~~-------------------~~---~~~~~~~ 225 (462)
T PLN02846 197 -----------------------------SIICNVHGVNPKFLEIGKLK-------------------LE---QQKNGEQ 225 (462)
T ss_pred -----------------------------CEEecCceechhhcCCCccc-------------------Hh---hhcCCCC
Confidence 34556799999988754211 00 0111122
Q ss_pred --CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001557 475 --KPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKH 551 (1054)
Q Consensus 475 --~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~-LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~ 551 (1054)
.+.++|+||+.+.||++.+|+|+..+.. ..+++. +|+|+|++ ..++++++.++++..++ |.|.
T Consensus 226 ~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~--~~~~~~l~ivGdGp~-----------~~~L~~~a~~l~l~~~v-f~G~ 291 (462)
T PLN02846 226 AFTKGAYYIGKMVWSKGYKELLKLLHKHQK--ELSGLEVDLYGSGED-----------SDEVKAAAEKLELDVRV-YPGR 291 (462)
T ss_pred CcceEEEEEecCcccCCHHHHHHHHHHHHh--hCCCeEEEEECCCcc-----------HHHHHHHHHhcCCcEEE-ECCC
Confidence 3579999999999999999999998853 234555 48899987 45567788888876444 7775
Q ss_pred CCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHH
Q 001557 552 HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLV 631 (1054)
Q Consensus 552 ~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll 631 (1054)
. +..++|+.+ ||||+||..|+||++++||||||+|||+++.++ .+++.++.+|++++ |.++++++|.+++
T Consensus 292 ~---~~~~~~~~~----DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai~~~l 361 (462)
T PLN02846 292 D---HADPLFHDY----KVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRATLKAL 361 (462)
T ss_pred C---CHHHHHHhC----CEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--CHHHHHHHHHHHH
Confidence 3 445799999 999999999999999999999999999999998 59999999999995 8999999999999
Q ss_pred hCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 001557 632 SDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISS 666 (1054)
Q Consensus 632 ~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~ 666 (1054)
+++. ..++..+ .+.|||+..+++|++.++-
T Consensus 362 ~~~~--~~~~~~a---~~~~SWe~~~~~l~~~~~~ 391 (462)
T PLN02846 362 AEEP--APLTDAQ---RHELSWEAATERFLRVADL 391 (462)
T ss_pred ccCc--hhHHHHH---HHhCCHHHHHHHHHHHhcc
Confidence 8532 2222222 2599999999999999984
No 54
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.97 E-value=4.2e-30 Score=300.24 Aligned_cols=282 Identities=16% Similarity=0.149 Sum_probs=188.0
Q ss_pred CcceEEEEcCCCchHHHH---------HHHccCCCCEEEEeCCCccchH--------HHHHHhCC--------CChhhhh
Q 001557 305 IWPVAIHGHYADAGDAAA---------LLSGALNVPMVFTGHSLGRDKL--------EQLLKQGR--------LSRDEIN 359 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~---------~l~~~~~iP~V~t~H~l~~~~~--------~~l~~~g~--------~~~~~i~ 359 (1054)
.+|||||.|....+++.. ...+..++|+|+|.|+.+.-.- ..+ +.+- .+.....
T Consensus 93 ~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~-~~~c~~Cp~l~~~~~~~~d 171 (405)
T PRK10125 93 PGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGW-KTGCQKCPTLNNYPPVKVD 171 (405)
T ss_pred cCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccc-cccCCCCCCccCCCCCccc
Confidence 679999999764432211 1124568999999999875420 001 0000 0000000
Q ss_pred hH-hHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcc
Q 001557 360 TT-YKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIV 438 (1054)
Q Consensus 360 ~~-~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~ 438 (1054)
.. ..+.++...-...++.++.+|++|+...+.+...+.. .++.|||||||...+.
T Consensus 172 ~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~~~~------------------------~~i~vI~NGid~~~~~ 227 (405)
T PRK10125 172 RAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGP------------------------GRCRIINNGIDMATEA 227 (405)
T ss_pred hHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHHcCC------------------------CCEEEeCCCcCccccc
Confidence 00 0111111112223456789999999887765443321 2899999999975433
Q ss_pred cCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCC--CCCCCHHHHHHHHHhcccccCCCcEEE-EEec
Q 001557 439 RHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARP--DPKKNITTLVKAFGECRPLRELANLTL-IMGN 515 (1054)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRl--d~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~ 515 (1054)
+..... + ....+++++|+++|+. ++.||+..+++|+..+. +++.| ++|.
T Consensus 228 ~~~~~~---------------~--------~~~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~-----~~~~L~ivG~ 279 (405)
T PRK10125 228 ILAELP---------------P--------VRETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG-----DKIELHTFGK 279 (405)
T ss_pred cccccc---------------c--------cccCCCCCEEEEEEeccccCCccHHHHHHHHHhCC-----CCeEEEEEcC
Confidence 211000 0 0012567889999994 47899999999999873 24554 6787
Q ss_pred CCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCC-CCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCE
Q 001557 516 RDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHH-KQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPI 594 (1054)
Q Consensus 516 ~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~-~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PV 594 (1054)
++... ...+.++|+. +..++..+|+.| |+||+||..|+||++++||||||+||
T Consensus 280 g~~~~----------------------~~~v~~~g~~~~~~~l~~~y~~a----DvfV~pS~~Egfp~vilEAmA~G~PV 333 (405)
T PRK10125 280 FSPFT----------------------AGNVVNHGFETDKRKLMSALNQM----DALVFSSRVDNYPLILCEALSIGVPV 333 (405)
T ss_pred CCccc----------------------ccceEEecCcCCHHHHHHHHHhC----CEEEECCccccCcCHHHHHHHcCCCE
Confidence 64210 1357778875 456899999999 99999999999999999999999999
Q ss_pred EEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHh
Q 001557 595 VATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISSC 667 (1054)
Q Consensus 595 Iat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~~~ 667 (1054)
|+|+.||++|++.+. +|++|+|.|++++|+++...+.+.. ...+..++++.+ +.|||+.++++|+++|+++
T Consensus 334 Vat~~gG~~Eiv~~~-~G~lv~~~d~~~La~~~~~~~~~~~-~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 334 IATHSDAAREVLQKS-GGKTVSEEEVLQLAQLSKPEIAQAV-FGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred EEeCCCChHHhEeCC-cEEEECCCCHHHHHhccCHHHHHHh-hhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 999999999999764 8999999999999986533222110 011234577776 6899999999999999863
No 55
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.97 E-value=1.9e-29 Score=296.78 Aligned_cols=375 Identities=18% Similarity=0.216 Sum_probs=249.3
Q ss_pred CcHhHHHHHHHHHHhcC-CCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEcc-CCCCCccc
Q 001557 191 GGQVKYVVELARALGSM-PGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIP-FGPKDKYV 268 (1054)
Q Consensus 191 GG~~~~v~eLa~aLa~~-~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip-~g~~~~~l 268 (1054)
||.++.+.+.+.+|.+. ++ ++|+|+|....... .+.+. .....|. ....+++.++++. .+ .++
T Consensus 14 gg~ervl~~a~~~l~~~~~~-~~v~i~t~~~~~~~--------~~~l~-~~~~~f~--~~~~~~~~~~~~~~~~---~~~ 78 (419)
T cd03806 14 GGGERVLWCAVRALQKRYPN-NIVVIYTGDLDATP--------EEILE-KVESRFN--IELDRPRIVFFLLKYR---KLV 78 (419)
T ss_pred CCchHHHHHHHHHHHHhCCC-cEEEEECCCCCCCH--------HHHHH-HHHHhcC--eecCCCceEEEEecce---eee
Confidence 69999999999999886 46 89999998642110 00000 0000111 1223466666653 21 122
Q ss_pred ccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcC-CCchHHHHHHHccCCCCEEEEeCCCcc----ch
Q 001557 269 QKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHY-ADAGDAAALLSGALNVPMVFTGHSLGR----DK 343 (1054)
Q Consensus 269 ~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~-~~a~~~a~~l~~~~~iP~V~t~H~l~~----~~ 343 (1054)
....|+++..+...+ ..+....+.+.. ..||||..|. +..++....+ ..++|+|+.+| ++ +.
T Consensus 79 -~~~~~~r~~~~~~~~-~~~~~~~~~~~~-------~~pDv~i~~~g~~~~~~~~~~--~~~~~~i~y~h--~P~~~~d~ 145 (419)
T cd03806 79 -EASTYPRFTLLGQAL-GSMILGLEALLK-------LVPDIFIDTMGYPFTYPLVRL--LGGCPVGAYVH--YPTISTDM 145 (419)
T ss_pred -ccccCCceeeHHHHH-HHHHHHHHHHHh-------cCCCEEEEcCCcccHHHHHHH--hcCCeEEEEec--CCcchHHH
Confidence 223555533221211 111111222211 4599998886 4333333222 22889999999 44 22
Q ss_pred HHHHHHhCC--------CChhh----hhhHh-HHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHh
Q 001557 344 LEQLLKQGR--------LSRDE----INTTY-KIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRAR 410 (1054)
Q Consensus 344 ~~~l~~~g~--------~~~~~----i~~~~-~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r 410 (1054)
+.. +..+. +.+.. +...| +++.+ .|+++++.||.|+++|+...+.+...+...
T Consensus 146 l~~-~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~--~~~~~~~~aD~ii~~S~~~~~~~~~~~~~~----------- 211 (419)
T cd03806 146 LQK-VRSREASYNNSATIARSPVLSKAKLLYYRLFAF--LYGLAGSFADVVMVNSTWTRNHIRSLWKRN----------- 211 (419)
T ss_pred HHH-HhhccccccCccchhccchHHHHHHHHHHHHHH--HHHHHhhcCCEEEECCHHHHHHHHHHhCcC-----------
Confidence 211 11111 11111 11111 12222 478899999999999998777665444321
Q ss_pred HhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCH
Q 001557 411 IKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNI 490 (1054)
Q Consensus 411 ~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi 490 (1054)
.++.|||||+|.+.|.+.... ...+.++|+++||+.+.||+
T Consensus 212 ------------~~~~vi~~gvd~~~~~~~~~~---------------------------~~~~~~~il~vgr~~~~K~~ 252 (419)
T cd03806 212 ------------TKPSIVYPPCDVEELLKLPLD---------------------------EKTRENQILSIAQFRPEKNH 252 (419)
T ss_pred ------------CCcEEEcCCCCHHHhcccccc---------------------------cccCCcEEEEEEeecCCCCH
Confidence 278999999999877632110 02456899999999999999
Q ss_pred HHHHHHHHhcccccCC---CcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhc
Q 001557 491 TTLVKAFGECRPLREL---ANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 566 (1054)
Q Consensus 491 ~~ll~A~~~l~~~~~~---~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~ 566 (1054)
..+|+||..+.+..+. +++.| |+|++... +..++...++++++++++.++|.|+|.++.+++..+|+.|
T Consensus 253 ~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~-----~~~~~~~~L~~~~~~l~l~~~V~f~g~v~~~~l~~~l~~a-- 325 (419)
T cd03806 253 PLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNE-----DDEKRVEDLKLLAKELGLEDKVEFVVNAPFEELLEELSTA-- 325 (419)
T ss_pred HHHHHHHHHHHHhCcccccCceEEEEEcCCCCc-----ccHHHHHHHHHHHHHhCCCCeEEEecCCCHHHHHHHHHhC--
Confidence 9999999999754443 35665 66765421 1234678889999999999999999999999999999999
Q ss_pred CCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCc-cccee---eCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHH
Q 001557 567 TKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGP-VDIHR---VLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQ 642 (1054)
Q Consensus 567 ~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~-~eiv~---~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~ 642 (1054)
|++|+|+..|+||++++||||||+|||+++.||+ .|++. ++.+|++++ |+++++++|.+++++++...++..
T Consensus 326 --dv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~ 401 (419)
T cd03806 326 --SIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLRIR 401 (419)
T ss_pred --eEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHHHH
Confidence 9999999999999999999999999999999876 47887 789999985 999999999999997655444344
Q ss_pred HHHHHH-hcCCHHHHH
Q 001557 643 NGLKNI-HQFSWPEHC 657 (1054)
Q Consensus 643 ~~~~~v-~~fsw~~~a 657 (1054)
++.+.+ ++|||+...
T Consensus 402 ~~~~~~~~~fs~~~f~ 417 (419)
T cd03806 402 RAARSSVKRFSDEEFE 417 (419)
T ss_pred HHHHHHHHhhCHHHhc
Confidence 444445 899998764
No 56
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.97 E-value=1.6e-29 Score=285.36 Aligned_cols=344 Identities=24% Similarity=0.341 Sum_probs=248.7
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccccccc
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 246 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 246 (1054)
||++++.+.. + .||..+++.+|+++|.+. | |+|++++..... . ..
T Consensus 1 kI~i~~~~~~-----------~-~gG~~~~~~~l~~~L~~~-g-~~v~v~~~~~~~---~-----~~------------- 45 (348)
T cd03820 1 KILFVIPSLG-----------N-AGGAERVLSNLANALAEK-G-HEVTIISLDKGE---P-----PF------------- 45 (348)
T ss_pred CeEEEecccc-----------C-CCChHHHHHHHHHHHHhC-C-CeEEEEecCCCC---C-----Cc-------------
Confidence 5788885321 2 699999999999999998 8 999999975321 0 00
Q ss_pred ccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHc
Q 001557 247 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSG 326 (1054)
Q Consensus 247 ~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~ 326 (1054)
.....++.+..++..+.. ..+... .....+.+.+.. .+||+||++.... .......
T Consensus 46 -~~~~~~~~~~~~~~~~~~------~~~~~~--------~~~~~~~~~l~~-------~~~d~i~~~~~~~--~~~~~~~ 101 (348)
T cd03820 46 -YELDPKIKVIDLGDKRDS------KLLARF--------KKLRRLRKLLKN-------NKPDVVISFLTSL--LTFLASL 101 (348)
T ss_pred -cccCCccceeeccccccc------chhccc--------cchHHHHHhhcc-------cCCCEEEEcCchH--HHHHHHH
Confidence 001235566665543221 000000 001111122211 5699999998652 1122222
Q ss_pred cCC-CCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHH
Q 001557 327 ALN-VPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1054)
Q Consensus 327 ~~~-iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~ 405 (1054)
..+ +|++++.|+......... .+...++..++.+|.+++.|+...... +..
T Consensus 102 ~~~~~~~i~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~d~ii~~s~~~~~~~---~~~------- 153 (348)
T cd03820 102 GLKIVKLIVSEHNSPDAYKKRL------------------RRLLLRRLLYRRADAVVVLTEEDRALY---YKK------- 153 (348)
T ss_pred hhccccEEEecCCCccchhhhh------------------HHHHHHHHHHhcCCEEEEeCHHHHHHh---hcc-------
Confidence 234 599999998644331110 000135567999999999998765211 111
Q ss_pred HHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCC
Q 001557 406 KLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPD 485 (1054)
Q Consensus 406 ~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld 485 (1054)
+..++.++|||++...+.+. ...+.+.|+++|++.
T Consensus 154 ---------------~~~~~~vi~~~~~~~~~~~~------------------------------~~~~~~~i~~~g~~~ 188 (348)
T cd03820 154 ---------------FNKNVVVIPNPLPFPPEEPS------------------------------SDLKSKRILAVGRLV 188 (348)
T ss_pred ---------------CCCCeEEecCCcChhhcccc------------------------------CCCCCcEEEEEEeec
Confidence 11289999999998766532 125578899999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHh
Q 001557 486 PKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLA 564 (1054)
Q Consensus 486 ~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A 564 (1054)
+.||++.+++|+..+.+ ..+++.+ ++|.++. ...+.+++.++++.+.|.+.|. .+++..+|+.|
T Consensus 189 ~~K~~~~l~~~~~~l~~--~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a 253 (348)
T cd03820 189 PQKGFDLLIEAWAKIAK--KHPDWKLRIVGDGPE-----------REALEALIKELGLEDRVILLGF--TKNIEEYYAKA 253 (348)
T ss_pred cccCHHHHHHHHHHHHh--cCCCeEEEEEeCCCC-----------HHHHHHHHHHcCCCCeEEEcCC--cchHHHHHHhC
Confidence 99999999999999964 3455555 6787765 2345567888899899999998 78999999999
Q ss_pred hcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcccc-CcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 001557 565 AKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNG-GPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQN 643 (1054)
Q Consensus 565 a~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~G-g~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~ 643 (1054)
|++|+||..|+||++++|||+||+|||+++.+ +..+++.++.+|+++++.|+++++++|.+++++++.+++++++
T Consensus 254 ----d~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~ 329 (348)
T cd03820 254 ----SIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDEELRKRMGAN 329 (348)
T ss_pred ----CEEEeCccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 99999999999999999999999999999964 5677777777999999999999999999999999999999999
Q ss_pred HHHHHhcCCHHHHHHHHH
Q 001557 644 GLKNIHQFSWPEHCKSYL 661 (1054)
Q Consensus 644 ~~~~v~~fsw~~~a~~yl 661 (1054)
+++.++.|+|+.++++|.
T Consensus 330 ~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 330 ARESAERFSIENIIKQWE 347 (348)
T ss_pred HHHHHHHhCHHHHHHHhc
Confidence 977778999999999885
No 57
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.97 E-value=3e-29 Score=287.38 Aligned_cols=356 Identities=20% Similarity=0.234 Sum_probs=248.6
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccccccc
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 246 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 246 (1054)
||++|+.+ + |..||.++++.+|+++|++. | |+|.+++.....+... ..
T Consensus 1 kI~~v~~~-~-----------~~~gG~~~~~~~l~~~L~~~-g-~~v~v~~~~~~~~~~~--------~~---------- 48 (366)
T cd03822 1 RIALVSPY-P-----------PRKCGIATFTTDLVNALSAR-G-PDVLVVSVAALYPSLL--------YG---------- 48 (366)
T ss_pred CeEEecCC-C-----------CCCCcHHHHHHHHHHHhhhc-C-CeEEEEEeecccCccc--------CC----------
Confidence 68999863 2 45799999999999999999 8 9999998653211110 00
Q ss_pred ccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCC---chH---H
Q 001557 247 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYAD---AGD---A 320 (1054)
Q Consensus 247 ~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~---a~~---~ 320 (1054)
.......... .. .+ .....+ .+.+.. .+||+||++.+. ... .
T Consensus 49 --~~~~~~~~~~-~~------------~~---~~~~~~-------~~~~~~-------~~~dii~~~~~~~~~~~~~~~~ 96 (366)
T cd03822 49 --GEQEVVRVIV-LD------------NP---LDYRRA-------ARAIRL-------SGPDVVVIQHEYGIFGGEAGLY 96 (366)
T ss_pred --Ccccceeeee-cC------------Cc---hhHHHH-------HHHHhh-------cCCCEEEEeeccccccchhhHH
Confidence 0000111110 00 00 000111 111111 569999998732 112 2
Q ss_pred HHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCC
Q 001557 321 AALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFD 400 (1054)
Q Consensus 321 a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~ 400 (1054)
.....+..++|+|++.|+...... . ... .+ .++..++.+|.|+++|.....++.....
T Consensus 97 ~~~~~~~~~~~~i~~~h~~~~~~~-------~-------~~~---~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~--- 154 (366)
T cd03822 97 LLLLLRGLGIPVVVTLHTVLLHEP-------R-------PGD---RA--LLRLLLRRADAVIVMSSELLRALLLRAY--- 154 (366)
T ss_pred HHHHHhhcCCCEEEEEecCCcccc-------c-------hhh---hH--HHHHHHhcCCEEEEeeHHHHHHHHhhcC---
Confidence 222234579999999999711110 0 000 11 2344688999999997444333322111
Q ss_pred hHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEE
Q 001557 401 PVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILA 480 (1054)
Q Consensus 401 ~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~ 480 (1054)
..++.+||||++...+.+... ........++++|++
T Consensus 155 ---------------------~~~~~~i~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~i~~ 190 (366)
T cd03822 155 ---------------------PEKIAVIPHGVPDPPAEPPES-----------------------LKALGGLDGRPVLLT 190 (366)
T ss_pred ---------------------CCcEEEeCCCCcCcccCCchh-----------------------hHhhcCCCCCeEEEE
Confidence 128999999999876653210 012222456789999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCC-CCCCcHH
Q 001557 481 LARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKH-HKQSDVP 558 (1054)
Q Consensus 481 vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~-~~~~dl~ 558 (1054)
+||+.+.||++.+++|+..+... .+++.+ ++|.+....... .....+++.++++.++|.|+|. ++.+++.
T Consensus 191 ~G~~~~~K~~~~ll~a~~~~~~~--~~~~~l~i~G~~~~~~~~~------~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~ 262 (366)
T cd03822 191 FGLLRPYKGLELLLEALPLLVAK--HPDVRLLVAGETHPDLERY------RGEAYALAERLGLADRVIFINRYLPDEELP 262 (366)
T ss_pred EeeccCCCCHHHHHHHHHHHHhh--CCCeEEEEeccCccchhhh------hhhhHhHHHhcCCCCcEEEecCcCCHHHHH
Confidence 99999999999999999998643 345555 677765321110 1111145788899999999987 9999999
Q ss_pred HHHHHhhcCCcEEEecCCCC--CCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHH
Q 001557 559 DIYRLAAKTKGVFINPAFIE--PFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQL 636 (1054)
Q Consensus 559 ~ly~~Aa~~~dv~v~ps~~E--gfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~ 636 (1054)
.+|+.| |++++|+..| +||++++||||||+|||+++.|+ .+.+.+..+|+++++.|+++++++|.+++++++.
T Consensus 263 ~~~~~a----d~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~~~ 337 (366)
T cd03822 263 ELFSAA----DVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADPEL 337 (366)
T ss_pred HHHhhc----CEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcChHH
Confidence 999999 9999999999 99999999999999999999999 6777778899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 001557 637 WERCRQNGLKNIHQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 637 ~~~~~~~~~~~v~~fsw~~~a~~yl~~l~ 665 (1054)
+.++++++++.++.|||+.++++|.++|+
T Consensus 338 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 366 (366)
T cd03822 338 AQALRARAREYARAMSWERVAERYLRLLA 366 (366)
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHhC
Confidence 99999999999966999999999998873
No 58
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.97 E-value=2.2e-29 Score=286.63 Aligned_cols=350 Identities=21% Similarity=0.279 Sum_probs=253.9
Q ss_pred CcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCccccc
Q 001557 191 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQK 270 (1054)
Q Consensus 191 GG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~k 270 (1054)
||.++++..|+++|.+. | ++|.+++.....+ .... ....++.++.++....
T Consensus 12 gG~~~~~~~l~~~l~~~-~-~~v~~~~~~~~~~--------~~~~-------------~~~~~i~v~~~~~~~~------ 62 (365)
T cd03807 12 GGAERMLVRLLKGLDRD-R-FEHVVISLTDRGE--------LGEE-------------LEEAGVPVYCLGKRPG------ 62 (365)
T ss_pred ccHHHHHHHHHHHhhhc-c-ceEEEEecCcchh--------hhHH-------------HHhcCCeEEEEecccc------
Confidence 89999999999999988 7 9999998642110 0000 0113677777664321
Q ss_pred ccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHcc-CCCCEEEEeCCCccchHHHHHH
Q 001557 271 ELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGA-LNVPMVFTGHSLGRDKLEQLLK 349 (1054)
Q Consensus 271 ~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~ 349 (1054)
+... .+.. ++.+.+.+ .+||+||+|.......+...+.. .++|++++.|+......
T Consensus 63 ---~~~~-~~~~-------~~~~~~~~-------~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----- 119 (365)
T cd03807 63 ---RPDP-GALL-------RLYKLIRR-------LRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG----- 119 (365)
T ss_pred ---cccH-HHHH-------HHHHHHHh-------hCCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc-----
Confidence 1111 1111 12222222 56999999986655555555544 68999999998755421
Q ss_pred hCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeC
Q 001557 350 QGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIP 429 (1054)
Q Consensus 350 ~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIP 429 (1054)
+. ...+..+ .+....+.++.++++|+...+.+... ++.. .++.++|
T Consensus 120 -~~--------~~~~~~~--~~~~~~~~~~~~i~~s~~~~~~~~~~--~~~~---------------------~~~~vi~ 165 (365)
T cd03807 120 -KK--------STRLVAR--LRRLLSSFIPLIVANSAAAAEYHQAI--GYPP---------------------KKIVVIP 165 (365)
T ss_pred -ch--------hHhHHHH--HHHHhccccCeEEeccHHHHHHHHHc--CCCh---------------------hheeEeC
Confidence 00 0011111 24456788999999998776655432 2222 2899999
Q ss_pred CCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcE
Q 001557 430 PGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANL 509 (1054)
Q Consensus 430 nGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l 509 (1054)
||+|...|.+.... ....+..+..+++.++|+++||+.+.||++.+++|+..+.+. .+++
T Consensus 166 ~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~--~~~~ 225 (365)
T cd03807 166 NGVDTERFSPDLDA------------------RARLREELGLPEDTFLIGIVARLHPQKDHATLLRAAALLLKK--FPNA 225 (365)
T ss_pred CCcCHHhcCCcccc------------------hHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHHHHHHHh--CCCe
Confidence 99998877643211 111123344456778999999999999999999999998643 4456
Q ss_pred EE-EEecCCCchhhhhchHHHHHHHHHHHH-HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHH
Q 001557 510 TL-IMGNRDDIDEMSGTNAALLLSILKLID-KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEA 587 (1054)
Q Consensus 510 ~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~-~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EA 587 (1054)
.+ ++|.++... .+..... .+++.++|.+.|. .+++..+|+.| |++|+|+..|+||++++||
T Consensus 226 ~l~i~G~~~~~~-----------~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a----di~v~ps~~e~~~~~~~Ea 288 (365)
T cd03807 226 RLLLVGDGPDRA-----------NLELLALKELGLEDKVILLGE--RSDVPALLNAL----DVFVLSSLSEGFPNVLLEA 288 (365)
T ss_pred EEEEecCCcchh-----------HHHHHHHHhcCCCceEEEccc--cccHHHHHHhC----CEEEeCCccccCCcHHHHH
Confidence 65 667765422 2233333 7788889999996 57899999999 9999999999999999999
Q ss_pred HHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 001557 588 AAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 588 mA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~ 665 (1054)
|+||+|||+++.|+..+++.+ +|+++++.|+++++++|.+++++++.+.++++++++.+ +.|||+..+++|.++|+
T Consensus 289 ~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 365 (365)
T cd03807 289 MACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALLADPALRQALGEAARERIEENFSIEAMVEAYEELYR 365 (365)
T ss_pred HhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999999999999999876 89999999999999999999999999999999999999 68999999999999873
No 59
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.97 E-value=2.9e-29 Score=287.89 Aligned_cols=278 Identities=21% Similarity=0.248 Sum_probs=209.9
Q ss_pred CcceEEEEcCCCchHHHHHHHc-cCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEe
Q 001557 305 IWPVAIHGHYADAGDAAALLSG-ALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 383 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~-~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~ 383 (1054)
.+||+||+|...+..++.++.. ..++|+|++.|+...... ...+. .+.....++.+++
T Consensus 78 ~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~----------------~~~~~-----~~~~~~~~~~~~~ 136 (360)
T cd04951 78 FKPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGR----------------LRMLA-----YRLTDFLSDLTTN 136 (360)
T ss_pred cCCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhH----------------HHHHH-----HHHHhhccCceEE
Confidence 5699999998766555554443 347899999998643210 01111 1223455778888
Q ss_pred cCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchh
Q 001557 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIW 463 (1054)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1054)
+|....+.+..... .+..++.+||||+|...|.+... ...
T Consensus 137 ~s~~~~~~~~~~~~----------------------~~~~~~~~i~ng~~~~~~~~~~~------------------~~~ 176 (360)
T cd04951 137 VSKEALDYFIASKA----------------------FNANKSFVVYNGIDTDRFRKDPA------------------RRL 176 (360)
T ss_pred EcHHHHHHHHhccC----------------------CCcccEEEEccccchhhcCcchH------------------HHH
Confidence 88876665543321 11238999999999887764211 111
Q ss_pred HHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCC
Q 001557 464 SEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDL 542 (1054)
Q Consensus 464 ~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l 542 (1054)
.....+...+++++++++||+.+.||++.+++|+..+.+.. +++.+ |+|+++. ...+.+.+.++++
T Consensus 177 ~~~~~~~~~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~--~~~~l~i~G~g~~-----------~~~~~~~~~~~~~ 243 (360)
T cd04951 177 KIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDY--LDIKLLIAGDGPL-----------RATLERLIKALGL 243 (360)
T ss_pred HHHHHcCcCCCCEEEEEEeeCchhcCcHHHHHHHHHHHhhC--CCeEEEEEcCCCc-----------HHHHHHHHHhcCC
Confidence 12223334567789999999999999999999999886433 45565 7788765 3456677788888
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHH
Q 001557 543 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQS 622 (1054)
Q Consensus 543 ~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~ 622 (1054)
.++|.|+|. .+++..+|+.| |++|+||..|+||++++||||+|+|||+++.|+..|++.+ +|+++++.|+++
T Consensus 244 ~~~v~~~g~--~~~~~~~~~~a----d~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~ 315 (360)
T cd04951 244 SNRVKLLGL--RDDIAAYYNAA----DLFVLSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDPEA 315 (360)
T ss_pred CCcEEEecc--cccHHHHHHhh----ceEEecccccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCHHH
Confidence 889999997 46899999999 9999999999999999999999999999999999999875 899999999999
Q ss_pred HHHHHHHHHh-CHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 001557 623 IADALLKLVS-DKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 623 la~aI~~ll~-d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~ 665 (1054)
++++|.++++ ++..+..++.+ ++.+ +.|||+.++++|.++|.
T Consensus 316 ~~~~i~~ll~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 316 LANKIDEILKMSGEERDIIGAR-RERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHHHHHHHhCCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHhh
Confidence 9999999995 55555555555 6666 79999999999999985
No 60
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=99.97 E-value=3.5e-32 Score=304.92 Aligned_cols=255 Identities=33% Similarity=0.494 Sum_probs=180.5
Q ss_pred hhhhhhhccCcceEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCc-----------eEEEEEecCcCC
Q 001557 154 MENWAIQYKEKKLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGV-----------YRVDLLTRQVSA 222 (1054)
Q Consensus 154 ~~~~~~~~~~~~mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv-----------~~V~vvt~~~~~ 222 (1054)
++.+-... +|-.+|+++|+||++++++| ||| ||||||+.||+++|++|.+. ++ -+|.++|+.+.+
T Consensus 262 LE~Fl~Ri-Pmvf~vvliSpHG~f~q~nv-LG~-pDTGGQVvYVleqarALe~e-~~~ri~~~gl~i~p~i~i~TRlIpd 337 (550)
T PF00862_consen 262 LEKFLSRI-PMVFNVVLISPHGYFGQENV-LGR-PDTGGQVVYVLEQARALENE-MLYRIKLQGLDITPKIDIVTRLIPD 337 (550)
T ss_dssp HHHHHHHS----SEEEEE--SS--STTST-TSS-TTSSHHHHHHHHHHHHHHHH-THHHHHHTT-----EEEEEEE--TB
T ss_pred HHHHhhhc-ceeEEEEEEcCccccccccc-cCC-CCCCCcEEEEeHHHHHHHHH-HHHHHHhcCCCCCCceeeecccccC
Confidence 34433333 55679999999999999999 999 99999999999999999874 21 259999998743
Q ss_pred CCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCC----cccccccCCCChHHHHHHHHHHHHHHHHHHhhh
Q 001557 223 PDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKD----KYVQKELLWPHIPEFVDAALTHIIQISKVLGEQ 298 (1054)
Q Consensus 223 p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~----~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~ 298 (1054)
.. ...+.++. +.+...++++|+|+||++.+ +|+.|+.+|||+.+|++.+...+..- +
T Consensus 338 ~~-~t~~~q~l------------e~~~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e---~--- 398 (550)
T PF00862_consen 338 AK-GTTCNQRL------------EKVSGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAE---L--- 398 (550)
T ss_dssp TT-CGGGTSSE------------EEETTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHH---H---
T ss_pred Cc-CCCccccc------------cccCCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHH---h---
Confidence 22 22334443 33455679999999999963 68999999999999999887776531 1
Q ss_pred hcCCCCCcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccC
Q 001557 299 VGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDAS 378 (1054)
Q Consensus 299 ~~~~~~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~a 378 (1054)
..+||+||+||++++++|.++++++|+|+.+|.|+++..|+. .+.+.++.+...|+|++++.+|+.++++|
T Consensus 399 -----~~~PdlI~GnYsDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~----~s~~~w~e~e~~Yhfs~qftAd~iamn~a 469 (550)
T PF00862_consen 399 -----QGKPDLIIGNYSDGNLVASLLSRKLGVTQCFIAHSLEKTKYE----DSDLYWKEIEEKYHFSCQFTADLIAMNAA 469 (550)
T ss_dssp -----TS--SEEEEEHHHHHHHHHHHHHHHT-EEEEE-SS-HHHHHH----TTTTTSHHHHHHH-HHHHHHHHHHHHHHS
T ss_pred -----CCCCcEEEeccCcchHHHHHHHhhcCCceehhhhcccccccc----ccCCCHHHHHhhccchhhhhHHHHHhhcC
Confidence 156999999999999999999999999999999999998865 47778999999999999999999999999
Q ss_pred CEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCC
Q 001557 379 EIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHN 441 (1054)
Q Consensus 379 d~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~ 441 (1054)
|.|||||.|++..++..|+.|+.-....+.. ..+.|++++++.||+.++|||+|...|.|..
T Consensus 470 dfIItST~QEI~g~~~~~gqyes~~~ftlpg-Lyrvv~Gi~vFdPkfNiv~PGad~~iyFpyt 531 (550)
T PF00862_consen 470 DFIITSTYQEIAGQKDTVGQYESHKAFTLPG-LYRVVNGIDVFDPKFNIVSPGADESIYFPYT 531 (550)
T ss_dssp SEEEESSHHHHHB-SSSBHTTGGGSSEEETT-TEEEEES--TT-TTEEE------TTTS--TT
T ss_pred CEEEEcchHhhcCCccccCCccchhhcchHh-HHhhhccccccCCcccccCCCCCcceecCCc
Confidence 9999999999999888777765532222222 5788999999999999999999999999865
No 61
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.97 E-value=1e-28 Score=280.03 Aligned_cols=355 Identities=24% Similarity=0.330 Sum_probs=259.8
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccccccc
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 246 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 246 (1054)
||++++.. .||...++..|+++|.+. | |+|++++....... .
T Consensus 1 kIl~i~~~---------------~~g~~~~~~~l~~~L~~~-g-~~v~~~~~~~~~~~----------~----------- 42 (359)
T cd03808 1 KILHIVTV---------------DGGLYSFRLPLIKALRAA-G-YEVHVVAPPGDELE----------E----------- 42 (359)
T ss_pred CeeEEEec---------------chhHHHHHHHHHHHHHhc-C-CeeEEEecCCCccc----------c-----------
Confidence 58888852 379999999999999999 8 99999997532110 0
Q ss_pred ccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHc
Q 001557 247 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSG 326 (1054)
Q Consensus 247 ~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~ 326 (1054)
....++.++.++..... . ..+.. +..+..+.+.+.+ .+||+||+|......++...++
T Consensus 43 --~~~~~~~~~~~~~~~~~--~---~~~~~--------~~~~~~~~~~~~~-------~~~dvv~~~~~~~~~~~~~~~~ 100 (359)
T cd03808 43 --LEALGVKVIPIPLDRRG--I---NPFKD--------LKALLRLYRLLRK-------ERPDIVHTHTPKPGILGRLAAR 100 (359)
T ss_pred --cccCCceEEeccccccc--c---ChHhH--------HHHHHHHHHHHHh-------cCCCEEEEccccchhHHHHHHH
Confidence 11247777777764310 0 00100 1112222333322 5699999998766666665555
Q ss_pred -cCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHH
Q 001557 327 -ALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1054)
Q Consensus 327 -~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~ 405 (1054)
..+.+++++.|+......... . ...+... .++..++.+|.+++.|+...+.+...+...
T Consensus 101 ~~~~~~~i~~~~~~~~~~~~~~----------~--~~~~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~------ 160 (359)
T cd03808 101 LAGVPKVIYTVHGLGFVFTSGG----------L--KRRLYLL--LERLALRFTDKVIFQNEDDRDLALKLGIIK------ 160 (359)
T ss_pred HcCCCCEEEEecCcchhhccch----------h--HHHHHHH--HHHHHHhhccEEEEcCHHHHHHHHHhcCCC------
Confidence 456778888888654321100 0 1112222 256678899999999998877655443211
Q ss_pred HHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCC
Q 001557 406 KLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPD 485 (1054)
Q Consensus 406 ~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld 485 (1054)
...++.++|+|+|...+.+.... ..++.+.|+++|++.
T Consensus 161 ---------------~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~i~~~G~~~ 198 (359)
T cd03808 161 ---------------KKKTVLIPGSGVDLDRFSPSPEP---------------------------IPEDDPVFLFVARLL 198 (359)
T ss_pred ---------------cCceEEecCCCCChhhcCccccc---------------------------cCCCCcEEEEEeccc
Confidence 01278889999998877643210 125678999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHh
Q 001557 486 PKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLA 564 (1054)
Q Consensus 486 ~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A 564 (1054)
+.||++.+++++..+.+ ..+++.+ ++|.++...... .. ++..++....|.|.|+ .+++..+|+.|
T Consensus 199 ~~k~~~~li~~~~~l~~--~~~~~~l~i~G~~~~~~~~~--------~~--~~~~~~~~~~v~~~g~--~~~~~~~~~~a 264 (359)
T cd03808 199 KDKGIDELLEAARILKA--KGPNVRLLLVGDGDEENPAA--------IL--EIEKLGLEGRVEFLGF--RDDVPELLAAA 264 (359)
T ss_pred cccCHHHHHHHHHHHHh--cCCCeEEEEEcCCCcchhhH--------HH--HHHhcCCcceEEEeec--cccHHHHHHhc
Confidence 99999999999999864 2345555 667776432211 11 3566777789999998 68999999999
Q ss_pred hcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Q 001557 565 AKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNG 644 (1054)
Q Consensus 565 a~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~ 644 (1054)
|++|+|+..|+||++++|||+||+|||+++.|+..+++.++.+|+++++.|+++++++|.+++.+++.+.++++++
T Consensus 265 ----di~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~ 340 (359)
T cd03808 265 ----DVFVLPSYREGLPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDPELRARMGQAA 340 (359)
T ss_pred ----cEEEecCcccCcchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred HHHH-hcCCHHHHHHHHH
Q 001557 645 LKNI-HQFSWPEHCKSYL 661 (1054)
Q Consensus 645 ~~~v-~~fsw~~~a~~yl 661 (1054)
++.+ ++|+|+.++++|+
T Consensus 341 ~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 341 RKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHhcCHHHHHHHhh
Confidence 9997 7999999999886
No 62
>PLN02382 probable sucrose-phosphatase
Probab=99.97 E-value=2.6e-30 Score=299.94 Aligned_cols=247 Identities=20% Similarity=0.224 Sum_probs=190.3
Q ss_pred CCCEEEEEEecCCC-Ch----hhHHHHHHHH-HHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCc
Q 001557 767 RRKYVFVIAADCDT-TS----DFLEIIKKVV-EAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGS 840 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL-~~----~i~~~~~~al-~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa 840 (1054)
.++.+|++|+|||| ++ .++....+++ +++.++ |+.||+||||++..+.++++++++ ..||++||+||+
T Consensus 7 ~~~~lI~sDLDGTLL~~~~~~~~s~~~~~~l~~~~~~~----gi~fv~aTGR~~~~~~~l~~~~~l--~~p~~~I~~nGt 80 (413)
T PLN02382 7 SPRLMIVSDLDHTMVDHHDPENLSLLRFNALWEAEYRH----DSLLVFSTGRSPTLYKELRKEKPL--LTPDITIMSVGT 80 (413)
T ss_pred CCCEEEEEcCCCcCcCCCCccchhHHHHHHHHHHhhcC----CeeEEEEcCCCHHHHHHHHHhCCC--CCCCEEEEcCCc
Confidence 34689999999999 32 4664454554 777775 999999999999999999999988 468999999999
Q ss_pred EEEcCCCCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEecCCCCC
Q 001557 841 ELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMI 920 (1054)
Q Consensus 841 ~I~~~~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~~~~~ 920 (1054)
+|+|.+ .+..|..|..++...|....+.+.+..++.... +....+..+|++|+..+....
T Consensus 81 ~I~~~~---------~~~~d~~w~~~l~~~w~~~~v~~~~~~~~~l~~-----------q~~~~~~~~Ki~~~~~~~~~~ 140 (413)
T PLN02382 81 EIAYGE---------SMVPDHGWVEYLNKKWDREIVVEETSKFPELKL-----------QPETEQRPHKVSFYVDKKKAQ 140 (413)
T ss_pred EEEeCC---------CCccChhHHHHHhccCChhhHHHHHhcCCCccc-----------CCcccCCCeEEEEEechHHhH
Confidence 999865 455788999999999987655544444433222 223345688999987532222
Q ss_pred ccHHHHHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHh---CCCccCEEEEeCcCCCccccccccCcc-e
Q 001557 921 PPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRW---GIDLSNVVVIAGECGDTDYEGLLGGVH-K 996 (1054)
Q Consensus 921 ~~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~---gI~~e~vvaf~GD~~d~D~~eML~~ag-~ 996 (1054)
....++.+.+...+..+.++++++. ++||+|+++|||+||++|++++ |+++++++| +||++| | ++||+.+| +
T Consensus 141 ~~~~~l~~~~~~~g~~~~i~~s~~~-~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~ia-fGDs~N-D-leMl~~ag~~ 216 (413)
T PLN02382 141 EVIKELSERLEKRGLDVKIIYSGGI-DLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLV-CGDSGN-D-AELFSVPDVY 216 (413)
T ss_pred HHHHHHHHHHHhcCCcEEEEEECCc-EEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEE-EeCCHH-H-HHHHhcCCCC
Confidence 2344566666666678899999886 9999999999999999999999 999999999 889999 9 99999999 8
Q ss_pred EEEecCcchhHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHHHHhcccc
Q 001557 997 TVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGVLK 1052 (1054)
Q Consensus 997 gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al~~~~~~~ 1052 (1054)
||||+||. .+++.+++.+ ....++++ .+.+.+++||++||+||+++.
T Consensus 217 gvam~NA~--~elk~~a~~~------~~~~~~~~-~a~~~~~~GI~~al~~f~l~~ 263 (413)
T PLN02382 217 GVMVSNAQ--EELLQWYAEN------AKDNPKII-HATERCAAGIIQAIGHFNLGP 263 (413)
T ss_pred EEEEcCCc--HHHHHHHHhh------ccCCCcEE-EcCCCCccHHHHHHHHhCCCC
Confidence 99999999 6555543321 12234444 446778999999999999874
No 63
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.97 E-value=4.8e-30 Score=280.89 Aligned_cols=242 Identities=18% Similarity=0.241 Sum_probs=187.2
Q ss_pred CEEEEEEecCCCC------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEE
Q 001557 769 KYVFVIAADCDTT------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSEL 842 (1054)
Q Consensus 769 kkLiv~DiDGTL~------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I 842 (1054)
+.+|++|+||||. ..+++.+.+++++++++ |+.||+||||++.++..+++++++ ..|+++||+||+.|
T Consensus 1 ~~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~----gi~fv~aTGR~~~~~~~~~~~~~~--~~p~~~I~~NGa~I 74 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDGDNQALLRLNALLEDHRGE----DSLLVYSTGRSPHSYKELQKQKPL--LTPDIWVTSVGSEI 74 (249)
T ss_pred CeEEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhcc----CceEEEEcCCCHHHHHHHHhcCCC--CCCCEEEEcCCceE
Confidence 3689999999993 46899999999999986 899999999999999999999988 45889999999999
Q ss_pred EcCCCCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEecCCCCCcc
Q 001557 843 YYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIPP 922 (1054)
Q Consensus 843 ~~~~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~~~~~~~ 922 (1054)
++++ ....+..|..++...|..+.+......++.... ........+|++|..........
T Consensus 75 ~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----------~~~~~~~~~k~~~~~~~~~~~~~ 134 (249)
T TIGR01485 75 YYGG---------AEVPDQHWAEYLSEKWQRDIVVAITDKFEELKP-----------QPDLEQRPHKVSFFLDPEAAPEV 134 (249)
T ss_pred EeCC---------CCcCCHHHHHHHhcccCHHHHHHHHhcCccccc-----------CCccccCCeeEEEEechhhhhHH
Confidence 9864 234577888888888986655444332222111 11123457888887643221223
Q ss_pred HHHHHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccC-cceEEEec
Q 001557 923 VKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGG-VHKTVILK 1001 (1054)
Q Consensus 923 ~~el~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~-ag~gVaMg 1001 (1054)
+.++.+.+...+..+.++++.+. ++||+|+++|||.||++|++++|++++++++ +||+.| | ++||+. ++.+|+|+
T Consensus 135 ~~~l~~~l~~~~~~~~~~~~~~~-~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~-~GD~~N-D-~~ml~~~~~~~va~~ 210 (249)
T TIGR01485 135 IKQLTEMLKETGLDVKLIYSSGK-DLDILPQGSGKGQALQYLLQKLAMEPSQTLV-CGDSGN-D-IELFEIGSVRGVIVS 210 (249)
T ss_pred HHHHHHHHHhcCCCEEEEEECCc-eEEEEeCCCChHHHHHHHHHHcCCCccCEEE-EECChh-H-HHHHHccCCcEEEEC
Confidence 56677777776778888888875 9999999999999999999999999999999 888888 8 999997 67999999
Q ss_pred CcchhHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHHHHhccc
Q 001557 1002 GVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGVL 1051 (1054)
Q Consensus 1002 Na~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al~~~~~~ 1051 (1054)
||. .+++.... ..+.+.+ |+|+.+.++||++||+||+|+
T Consensus 211 na~--~~~k~~~~--------~~~~~~~-~~~~~~~~~Gi~e~l~~~~~~ 249 (249)
T TIGR01485 211 NAQ--EELLQWYD--------ENAKDKI-YHASERCAGGIIEAIAHFDLL 249 (249)
T ss_pred CCH--HHHHHHHH--------hcccCcE-EEecCCCcHHHHHHHHHcCCC
Confidence 998 44432221 1122333 577999999999999999985
No 64
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.97 E-value=1.1e-28 Score=281.01 Aligned_cols=283 Identities=30% Similarity=0.433 Sum_probs=227.1
Q ss_pred CcceEEEEcCC-CchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEe
Q 001557 305 IWPVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 383 (1054)
Q Consensus 305 ~~pDVIh~h~~-~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~ 383 (1054)
.+||+||+|+. ..+.++..+++..++|++++.|+......... .+.+. .++..+..+|.+++
T Consensus 92 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~---------------~~~~~--~~~~~~~~~d~ii~ 154 (377)
T cd03798 92 FRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRK---------------RLLRA--LLRRALRRADAVIA 154 (377)
T ss_pred CCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCch---------------hhHHH--HHHHHHhcCCeEEe
Confidence 57999999975 45666777788889999999998755432110 01111 24557899999999
Q ss_pred cCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchh
Q 001557 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIW 463 (1054)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1054)
.|+...+.+...+ . +..++.++|||+|...+.+.....
T Consensus 155 ~s~~~~~~~~~~~--~---------------------~~~~~~~i~~~~~~~~~~~~~~~~------------------- 192 (377)
T cd03798 155 VSEALADELKALG--I---------------------DPEKVTVIPNGVDTERFSPADRAE------------------- 192 (377)
T ss_pred CCHHHHHHHHHhc--C---------------------CCCceEEcCCCcCcccCCCcchHH-------------------
Confidence 9998877765543 1 112899999999998876432110
Q ss_pred HHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCC
Q 001557 464 SEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDL 542 (1054)
Q Consensus 464 ~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l 542 (1054)
. .+.....+++.|+++|++.+.||++.+++++..+... .+++.+ ++|.++. ...+..++.++++
T Consensus 193 ~--~~~~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~--~~~~~l~i~g~~~~-----------~~~~~~~~~~~~~ 257 (377)
T cd03798 193 A--RKLGLPEDKKVILFVGRLVPRKGIDYLIEALARLLKK--RPDVHLVIVGDGPL-----------REALEALAAELGL 257 (377)
T ss_pred H--HhccCCCCceEEEEeccCccccCHHHHHHHHHHHHhc--CCCeEEEEEcCCcc-----------hHHHHHHHHhcCC
Confidence 0 1122245678999999999999999999999998643 456666 6677654 2345667778888
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHH
Q 001557 543 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQS 622 (1054)
Q Consensus 543 ~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~ 622 (1054)
.++|.+.|+++.+++..+|+.| |++|+|+..|++|++++|||+||+|||+++.|+..+++.++.+|+++++.|+++
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~a----d~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~ 333 (377)
T cd03798 258 EDRVTFLGAVPHEEVPAYYAAA----DVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEA 333 (377)
T ss_pred cceEEEeCCCCHHHHHHHHHhc----CeeecchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECCCCHHH
Confidence 8999999999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHh
Q 001557 623 IADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISSC 667 (1054)
Q Consensus 623 la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~~~ 667 (1054)
++++|.++++++.. ++..++++.+ +.|+|+.++++|.++|+++
T Consensus 334 l~~~i~~~~~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 334 LAEAILRLLADPWL--RLGRAARRRVAERFSWENVAERLLELYREV 377 (377)
T ss_pred HHHHHHHHhcCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHhhC
Confidence 99999999999887 6777777777 7999999999999998753
No 65
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.97 E-value=9.1e-29 Score=281.92 Aligned_cols=261 Identities=24% Similarity=0.294 Sum_probs=203.3
Q ss_pred CcceEEEEcCCC-chHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEe
Q 001557 305 IWPVAIHGHYAD-AGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 383 (1054)
Q Consensus 305 ~~pDVIh~h~~~-a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~ 383 (1054)
.+||+||+|... .+......++..++|+|++.|+.+...... .+ .....|.+++
T Consensus 95 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~~~~----------------~~---------~~~~~d~ii~ 149 (359)
T cd03823 95 FRPDVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLICPRQ----------------GL---------FKKGGDAVIA 149 (359)
T ss_pred cCCCEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeecchh----------------hh---------hccCCCEEEE
Confidence 569999999863 233344455667899999999875432110 00 1223399999
Q ss_pred cCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchh
Q 001557 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIW 463 (1054)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1054)
+|+...+.+...... ..++.+||||+|...+.+...
T Consensus 150 ~s~~~~~~~~~~~~~-----------------------~~~~~vi~n~~~~~~~~~~~~--------------------- 185 (359)
T cd03823 150 PSRFLLDRYVANGLF-----------------------AEKISVIRNGIDLDRAKRPRR--------------------- 185 (359)
T ss_pred eCHHHHHHHHHcCCC-----------------------ccceEEecCCcChhhcccccc---------------------
Confidence 999776665433211 128999999999987764211
Q ss_pred HHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCC
Q 001557 464 SEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDL 542 (1054)
Q Consensus 464 ~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l 542 (1054)
....++++|+++||+.+.||++.+++++..+.+ +++.+ ++|.++..... .... +.
T Consensus 186 ------~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~----~~~~l~i~G~~~~~~~~-----------~~~~---~~ 241 (359)
T cd03823 186 ------APPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR----GDIELVIVGNGLELEEE-----------SYEL---EG 241 (359)
T ss_pred ------CCCCCceEEEEEecCccccCHHHHHHHHHHHHh----cCcEEEEEcCchhhhHH-----------HHhh---cC
Confidence 013567789999999999999999999999853 45554 67877642221 1111 45
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC-CCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHH
Q 001557 543 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQ 621 (1054)
Q Consensus 543 ~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~-~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~ 621 (1054)
..+|.+.|+++.+++..+|+.| |++|+|+. .|+||++++|||+||+|||+++.|+..|++.++.+|+++++.|++
T Consensus 242 ~~~v~~~g~~~~~~~~~~~~~a----d~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~ 317 (359)
T cd03823 242 DPRVEFLGAYPQEEIDDFYAEI----DVLVVPSIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAE 317 (359)
T ss_pred CCeEEEeCCCCHHHHHHHHHhC----CEEEEcCcccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHH
Confidence 6789999999999999999999 99999997 799999999999999999999999999999988899999999999
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 001557 622 SIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 622 ~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~ 665 (1054)
+++++|.+++++++.++++++++++.... +.++++|+++|+
T Consensus 318 ~l~~~i~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 358 (359)
T cd03823 318 DLAAALERLIDDPDLLERLRAGIEPPRSI---EDQAEEYLKLYR 358 (359)
T ss_pred HHHHHHHHHHhChHHHHHHHHhHHHhhhH---HHHHHHHHHHhh
Confidence 99999999999999999999998877643 888999988875
No 66
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.97 E-value=7e-29 Score=288.65 Aligned_cols=447 Identities=20% Similarity=0.237 Sum_probs=294.4
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccc-c--c--
Q 001557 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNR-K--N-- 240 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~-~--~-- 240 (1054)
|||+++|.... | -.++||....+..|.++|++. | ++|.|+.+.+. .+...+....+.+.. . .
T Consensus 1 M~Il~v~~E~~----p-----~vK~GGLaDv~~alpk~L~~~-g-~~v~v~lP~y~--~~~~~~~~~~~~~~~~~~~~~~ 67 (487)
T COG0297 1 MKILFVASEIF----P-----FVKTGGLADVVGALPKALAKR-G-VDVRVLLPSYP--KVQKEWRDLLKVVGKFGVLKGG 67 (487)
T ss_pred Ccceeeeeeec----C-----ccccCcHHHHHHHhHHHHHhc-C-CeEEEEcCCch--hhhhhhccccceeeEeeeeecc
Confidence 88999987544 2 278999999999999999999 8 89999998754 221111111011000 0 0
Q ss_pred -ccccc-cccCCCCCeEEEEccCCCCCccccc--ccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCC-CCcceEEEEcCC
Q 001557 241 -TENLM-QGLGESSGAYIIRIPFGPKDKYVQK--ELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQ-PIWPVAIHGHYA 315 (1054)
Q Consensus 241 -~~~~~-~~~~~~~g~~i~rip~g~~~~~l~k--~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~-~~~pDVIh~h~~ 315 (1054)
..-+. +......++.+.-+... .+..+ ...+.+- +...++.. +.++-.+.+..+. ...|||||+|+|
T Consensus 68 ~~~~~~~~~~~~~~~v~~~lid~~---~~f~r~~~~~~~~~----d~~~Rf~~-F~~a~~~~~~~~~~~~~pDIvH~hDW 139 (487)
T COG0297 68 RAQLFIVKEYGKDGGVDLYLIDNP---ALFKRPDSTLYGYY----DNAERFAF-FSLAAAELAPLGLISWLPDIVHAHDW 139 (487)
T ss_pred cceEEEEEeecccCCCcEEEecCh---hhcCccccccCCCC----cHHHHHHH-HHHHHHHHhhhcCCCCCCCEEEeecH
Confidence 00000 00111111333333311 12222 1233332 33333332 2222223232221 146999999999
Q ss_pred CchHHHHHHHc----cCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhH-----HHHHHHHHHhhhccCCEEEecCH
Q 001557 316 DAGDAAALLSG----ALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYK-----IMRRIEAEELSLDASEIVITSTR 386 (1054)
Q Consensus 316 ~a~~~a~~l~~----~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~-----~~~ri~~E~~~l~~ad~Vi~~S~ 386 (1054)
.+++++.+++. ...+|.|+|+|++..+..........+.... ..|. ..-.+..++..+..||.|.++|+
T Consensus 140 qt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~--~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSp 217 (487)
T COG0297 140 QTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPF--EAYASFGLEFYGQISFLKGGLYYADAVTTVSP 217 (487)
T ss_pred HHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCH--HHhhhceeeecCcchhhhhhheeccEEEEECH
Confidence 99999999987 4589999999998766543211111111110 0111 00112335668999999999999
Q ss_pred HHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHH
Q 001557 387 QEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEI 466 (1054)
Q Consensus 387 ~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (1054)
.++.+++ ++.+...++..++.+.+ ++.-|-||||.+.+.|.....-. ..+........+.....+
T Consensus 218 tYa~Ei~--t~~~g~gl~g~l~~~~~-----------~l~GI~NgiD~~~wnp~~d~~~~--~~y~~~~~~~k~~nk~~L 282 (487)
T COG0297 218 TYAGEIY--TPEYGEGLEGLLSWRSG-----------KLSGILNGIDYDLWNPETDPYIA--ANYSAEVLPAKAENKVAL 282 (487)
T ss_pred HHHHhhc--cccccccchhhhhhccc-----------cEEEEEeeEEecccCcccccchh--ccCCccchhhhHHHHHHH
Confidence 9999987 55555555555555542 89999999999999986432100 000000000111111222
Q ss_pred -hhhcCC--CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCC
Q 001557 467 -MHFFSN--PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLY 543 (1054)
Q Consensus 467 -~~~~~~--~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~ 543 (1054)
.++..+ .+.|++.++||+..+||++.+++|+..+.+.. ..+ +++|.++ ..+...+..+..++.-
T Consensus 283 ~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~~-vilG~gd---------~~le~~~~~la~~~~~- 349 (487)
T COG0297 283 QERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQL-VLLGTGD---------PELEEALRALASRHPG- 349 (487)
T ss_pred HHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ceE-EEEecCc---------HHHHHHHHHHHHhcCc-
Confidence 233333 36799999999999999999999999996532 333 4778873 3457788888888764
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceee--------CCceEEe
Q 001557 544 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV--------LDNGLLV 615 (1054)
Q Consensus 544 ~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~--------~~~Gllv 615 (1054)
++...-..+..-...+|+.| |++++||++|||||+-++||++|+++|+..+||..|.|.+ ..+|+++
T Consensus 350 -~~~~~i~~~~~la~~i~aga----D~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f 424 (487)
T COG0297 350 -RVLVVIGYDEPLAHLIYAGA----DVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLF 424 (487)
T ss_pred -eEEEEeeecHHHHHHHHhcC----CEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEE
Confidence 55554444444556777877 9999999999999999999999999999999999999875 4789999
Q ss_pred CCCCHHHHHHHHHHHHh---CHHH-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhc
Q 001557 616 DPHDQQSIADALLKLVS---DKQL-WERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQR 670 (1054)
Q Consensus 616 ~p~d~~~la~aI~~ll~---d~~~-~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~~~~ 670 (1054)
.+.++++++.+|.+++. .+.. |+.+..+++. ..|+|+..|.+|.+.|+.++..
T Consensus 425 ~~~~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~--~d~sw~~sa~~y~~lY~~~~~~ 481 (487)
T COG0297 425 LQTNPDHLANALRRALVLYRAPPLLWRKVQPNAMG--ADFSWDLSAKEYVELYKPLLSK 481 (487)
T ss_pred ecCCHHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc--cccCchhHHHHHHHHHHHHhcc
Confidence 99999999999999987 4444 8888888887 6999999999999999998764
No 67
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.96 E-value=2.6e-28 Score=287.41 Aligned_cols=346 Identities=17% Similarity=0.166 Sum_probs=244.5
Q ss_pred ccccCCCChHHH----------HHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHccC-CCCEEEEeC
Q 001557 269 QKELLWPHIPEF----------VDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGAL-NVPMVFTGH 337 (1054)
Q Consensus 269 ~k~~l~~~l~~f----------~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~~-~iP~V~t~H 337 (1054)
.+..+||.+..+ ..........++.++.+.+.. -|+|.+|++...+++.++.+.. ..++.|..|
T Consensus 85 ~n~~lWPl~H~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~-----~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH 159 (456)
T TIGR02400 85 SNSTLWPLFHYRPDLIRYDRKAWEAYRRVNRLFAEALAPLLQP-----GDIVWVHDYHLMLLPAMLRELGVQNKIGFFLH 159 (456)
T ss_pred hhhhcchhhcccccccccCHHHHHHHHHHHHHHHHHHHHhCCC-----CCEEEEecchhhHHHHHHHhhCCCCeEEEEEe
Confidence 456677754321 222333344456666665332 4899999988778888887654 568889999
Q ss_pred CCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHh-Hhcccc
Q 001557 338 SLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRAR-IKRGVS 416 (1054)
Q Consensus 338 ~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r-~~~gv~ 416 (1054)
-.++.. +-+ ....+.+.| -..+-.||+|.+.|..+++.+..... +.++.. ...|+.
T Consensus 160 ipfP~~-e~f------------~~lp~r~~i---l~gll~~dligF~t~~~~~~Fl~~~~-------~~l~~~~~~~~~~ 216 (456)
T TIGR02400 160 IPFPSS-EIY------------RTLPWRREL---LEGLLAYDLVGFQTYDDARNFLSAVS-------RELGLETLPNGVE 216 (456)
T ss_pred CCCCCh-HHH------------hhCCcHHHH---HHHHhcCCEEEECCHHHHHHHHHHHH-------HHhCCcccCCceE
Confidence 765533 111 011111111 23578999999999999887655321 111111 123444
Q ss_pred cCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHH
Q 001557 417 CHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKA 496 (1054)
Q Consensus 417 ~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A 496 (1054)
..|+.. ++.+||||||++.|.+..... ........++..+ +++++|+++||+++.||++.+++|
T Consensus 217 ~~g~~~-~v~viP~GID~~~f~~~~~~~-------------~~~~~~~~lr~~~--~~~~vIl~VgRLd~~KGi~~ll~A 280 (456)
T TIGR02400 217 SGGRTV-RVGAFPIGIDVDRFAEQAKKP-------------SVQKRIAELRESL--KGRKLIIGVDRLDYSKGLPERLLA 280 (456)
T ss_pred ECCcEE-EEEEecCcCCHHHHHHHhcCh-------------hHHHHHHHHHHHc--CCCeEEEEccccccccCHHHHHHH
Confidence 445554 899999999999998542110 0111112233333 578899999999999999999999
Q ss_pred HHhcccccCCC--cEEE-EE-----ecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCC
Q 001557 497 FGECRPLRELA--NLTL-IM-----GNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTK 568 (1054)
Q Consensus 497 ~~~l~~~~~~~--~l~L-Ii-----G~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~ 568 (1054)
|+.+.+.++.. +++| ++ |+++.+..++....+..++++...+..++.+.+.+.+.++.+++.++|+.|
T Consensus 281 ~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aa---- 356 (456)
T TIGR02400 281 FERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAA---- 356 (456)
T ss_pred HHHHHHhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhC----
Confidence 99987555543 3444 33 344555555555555556666666667777878888999999999999999
Q ss_pred cEEEecCCCCCCcHHHHHHHHcCCC----EEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHH
Q 001557 569 GVFINPAFIEPFGLTLIEAAAYGLP----IVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVS-DKQLWERCRQN 643 (1054)
Q Consensus 569 dv~v~ps~~Egfgl~l~EAmA~G~P----VIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~ 643 (1054)
|+||+||+.||||+|++||||||+| +|+|+.+|..+.+. +|++|+|+|++++|+||.++|+ ++++++++.+.
T Consensus 357 Dv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~ 433 (456)
T TIGR02400 357 DVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GALLVNPYDIDGMADAIARALTMPLEEREERHRA 433 (456)
T ss_pred cEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHHhC---CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 9999999999999999999999999 88888777777653 7999999999999999999999 55677778888
Q ss_pred HHHHHhcCCHHHHHHHHHHHHH
Q 001557 644 GLKNIHQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 644 ~~~~v~~fsw~~~a~~yl~~l~ 665 (1054)
+++.+..||+..|+++|++.+.
T Consensus 434 ~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 434 MMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred HHHHHhhCCHHHHHHHHHHHhh
Confidence 8888888999999999998664
No 68
>PLN02275 transferase, transferring glycosyl groups
Probab=99.96 E-value=2.8e-27 Score=274.42 Aligned_cols=332 Identities=15% Similarity=0.101 Sum_probs=221.8
Q ss_pred CcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCccccc
Q 001557 191 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQK 270 (1054)
Q Consensus 191 GG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~k 270 (1054)
+|.+..+.+++..|+++++ ++|++++.... +... +.....|++|+++|. +....
T Consensus 15 ~g~~~r~~~~~~~l~~~~~-~~v~vi~~~~~--------~~~~-------------~~~~~~~v~v~r~~~-~~~~~--- 68 (371)
T PLN02275 15 FGRSPRMQYHALSLARQAS-FQVDVVAYGGS--------EPIP-------------ALLNHPSIHIHLMVQ-PRLLQ--- 68 (371)
T ss_pred CCCCHHHHHHHHHHHhcCC-ceEEEEEecCC--------CCCH-------------HHhcCCcEEEEECCC-ccccc---
Confidence 3555577889999998844 58999985311 1111 112345899999986 33111
Q ss_pred ccCCCChH--HHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCc---hHHHHHHHccCCCCEEEEeCCCccchHH
Q 001557 271 ELLWPHIP--EFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADA---GDAAALLSGALNVPMVFTGHSLGRDKLE 345 (1054)
Q Consensus 271 ~~l~~~l~--~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a---~~~a~~l~~~~~iP~V~t~H~l~~~~~~ 345 (1054)
.+...+. .+.......+..+.+.+.. +..+||+||+|.... ..++.++++..++|+|+|.|+++..
T Consensus 69 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--- 139 (371)
T PLN02275 69 -RLPRVLYALALLLKVAIQFLMLLWFLCV-----KIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT--- 139 (371)
T ss_pred -ccccchHHHHHHHHHHHHHHHHHHHHHh-----hCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH---
Confidence 1112221 0111111111222222111 125699999987432 3456667777899999999997521
Q ss_pred HHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcE
Q 001557 346 QLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRM 425 (1054)
Q Consensus 346 ~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv 425 (1054)
....|.... ...+++.+++ |+..++.+|.|+++|+...+.+.+.+.. ++
T Consensus 140 -~~~~~~~~~---~~~~~~~~~~--e~~~~~~ad~ii~~S~~~~~~l~~~~g~-------------------------~i 188 (371)
T PLN02275 140 -LLALSLGRS---HPLVRLYRWY--ERHYGKMADGHLCVTKAMQHELDQNWGI-------------------------RA 188 (371)
T ss_pred -HHhcccCCC---CHHHHHHHHH--HHHHHhhCCEEEECCHHHHHHHHHhcCC-------------------------Ce
Confidence 111121111 1122344443 7778999999999999887765332211 37
Q ss_pred EEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc--
Q 001557 426 VVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPL-- 503 (1054)
Q Consensus 426 ~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~-- 503 (1054)
.+||||+ .+.|.|..... ....+...+|+++||+.+.||++.+++|+..+...
T Consensus 189 ~vi~n~~-~~~f~~~~~~~------------------------~~~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~ 243 (371)
T PLN02275 189 TVLYDQP-PEFFRPASLEI------------------------RLRPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVA 243 (371)
T ss_pred EEECCCC-HHHcCcCCchh------------------------cccCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhh
Confidence 8999995 46665432100 00113345788999999999999999999877311
Q ss_pred -------------cCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEe-CCCCCCCcHHHHHHHhhcCC
Q 001557 504 -------------RELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTK 568 (1054)
Q Consensus 504 -------------~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~-~g~~~~~dl~~ly~~Aa~~~ 568 (1054)
...+++.| |+|+|+. ..+++++++++++.+ +.| .++++.++++.+|+.|
T Consensus 244 ~~~~~~~~~~~~~~~~~~i~l~ivG~G~~-----------~~~l~~~~~~~~l~~-v~~~~~~~~~~~~~~~l~~a---- 307 (371)
T PLN02275 244 ARLNESDSASGKQSLYPRLLFIITGKGPQ-----------KAMYEEKISRLNLRH-VAFRTMWLEAEDYPLLLGSA---- 307 (371)
T ss_pred hccccccccccccccCCCeEEEEEeCCCC-----------HHHHHHHHHHcCCCc-eEEEcCCCCHHHHHHHHHhC----
Confidence 12356665 7899986 456778889999977 665 5578999999999999
Q ss_pred cEEEecC---CCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHH
Q 001557 569 GVFINPA---FIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLV 631 (1054)
Q Consensus 569 dv~v~ps---~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll 631 (1054)
|++|+|+ ..|+||++++||||||+|||+++.||..|+|.++.+|++++ |+++++++|.++|
T Consensus 308 Dv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 308 DLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred CEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 9999863 24899999999999999999999999999999999999996 7999999998874
No 69
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.96 E-value=7.5e-28 Score=282.51 Aligned_cols=276 Identities=17% Similarity=0.240 Sum_probs=218.3
Q ss_pred CcceEEEEcCCC-chHHHHHHHccCCCC-EEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEE
Q 001557 305 IWPVAIHGHYAD-AGDAAALLSGALNVP-MVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVI 382 (1054)
Q Consensus 305 ~~pDVIh~h~~~-a~~~a~~l~~~~~iP-~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi 382 (1054)
..+|++|+++.. .++.+..+.+..+.+ +|.+.|+..... .. ....+... .+.+++.+|.|+
T Consensus 126 ~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~--~~----------~~~~~~~~-----~~~~~~~~d~ii 188 (407)
T cd04946 126 GQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYE--DR----------YPSGYIPL-----RRYLLSSLDAVF 188 (407)
T ss_pred cCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhh--hh----------ccccchHH-----HHHHHhcCCEEE
Confidence 457899997653 344455566666666 999999753211 00 00011111 233588999999
Q ss_pred ecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCch
Q 001557 383 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPI 462 (1054)
Q Consensus 383 ~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1054)
++|+...+.+...|+.. ..++.++|+|++...+.+..
T Consensus 189 ~~S~~~~~~l~~~~~~~----------------------~~ki~vi~~gv~~~~~~~~~--------------------- 225 (407)
T cd04946 189 PCSEQGRNYLQKRYPAY----------------------KEKIKVSYLGVSDPGIISKP--------------------- 225 (407)
T ss_pred ECCHHHHHHHHHHCCCc----------------------cccEEEEECCcccccccCCC---------------------
Confidence 99999888776666432 23889999999987665320
Q ss_pred hHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcC
Q 001557 463 WSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYD 541 (1054)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~ 541 (1054)
...+.+.|+++||+.+.||++.+++|+..+.+..+..++.+ ++|+++. ...+.+++...+
T Consensus 226 --------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~-----------~~~l~~~~~~~~ 286 (407)
T cd04946 226 --------SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL-----------EDTLKELAESKP 286 (407)
T ss_pred --------CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH-----------HHHHHHHHHhcC
Confidence 02456789999999999999999999999976555556665 6788764 345667777777
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCC-CH
Q 001557 542 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPH-DQ 620 (1054)
Q Consensus 542 l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~-d~ 620 (1054)
..++|.|+|+++.+++..+|+.+ ..|+|++||..||||++++||||||+|||+|+.||..|++.++.+|+++++. |+
T Consensus 287 ~~~~V~f~G~v~~~e~~~~~~~~--~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~ 364 (407)
T cd04946 287 ENISVNFTGELSNSEVYKLYKEN--PVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTP 364 (407)
T ss_pred CCceEEEecCCChHHHHHHHhhc--CCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCH
Confidence 78899999999999999999863 1189999999999999999999999999999999999999998899999864 89
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHH
Q 001557 621 QSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYL 661 (1054)
Q Consensus 621 ~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl 661 (1054)
++++++|.++++|++++++|+++|++.+ ++|||+...++|+
T Consensus 365 ~~la~~I~~ll~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 365 NELVSSLSKFIDNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 9999999999999999999999999999 7999999998885
No 70
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.96 E-value=6.5e-29 Score=269.82 Aligned_cols=233 Identities=21% Similarity=0.370 Sum_probs=177.5
Q ss_pred EEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcCCC
Q 001557 771 VFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSS 847 (1054)
Q Consensus 771 Liv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~~~ 847 (1054)
||++|+|||| ++.+++.+ ++++ +++ .|+.|++||||++.++.++++.+++. .||++||+||+.|++..
T Consensus 1 li~~DlDgTLl~~~~~~~~~~-~~~~-~~~----~gi~~viaTGR~~~~v~~~~~~l~l~--~~~~~I~~nGa~i~~~~- 71 (236)
T TIGR02471 1 LIITDLDNTLLGDDEGLASFV-ELLR-GSG----DAVGFGIATGRSVESAKSRYAKLNLP--SPDVLIARVGTEIYYGP- 71 (236)
T ss_pred CeEEeccccccCCHHHHHHHH-HHHH-hcC----CCceEEEEeCCCHHHHHHHHHhCCCC--CCCEEEECCCceEEeCC-
Confidence 5899999999 35577666 6776 455 48999999999999999999999983 57899999999998754
Q ss_pred CCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEecCCCCCccHHHHH
Q 001557 848 STEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIPPVKELR 927 (1054)
Q Consensus 848 ~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~~~~~~~~~el~ 927 (1054)
....+..|..++...|..+.+...+..+++... +.......++++|... ++....+.++.
T Consensus 72 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~i~~~~~-~~~~~~~~~~~ 131 (236)
T TIGR02471 72 --------ELQPDRFWQKHIDHDWRRQAVVEALADIPGLTL-----------QDDQEQGPFKISYLLD-PEGEPILPQIR 131 (236)
T ss_pred --------CCCCChhHHHHHhcCCCHHHHHHHHhcCCCcEe-----------CChhcCCCeeEEEEEC-cccchHHHHHH
Confidence 223355576677777876655544433333221 1122234678888763 43334456777
Q ss_pred HHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEecCcchhH
Q 001557 928 KLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESA 1007 (1054)
Q Consensus 928 ~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMgNa~~~~ 1007 (1054)
+.+...+..+.++.+++. ++||+|+++|||.||++|++++|++++++++ +||+.| | ++||+.+|+||+|+||. .
T Consensus 132 ~~l~~~~~~~~~~~~~~~-~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~-~GD~~n-D-~~ml~~~~~~iav~na~--~ 205 (236)
T TIGR02471 132 QRLRQQSQAAKVILSCGW-FLDVLPLRASKGLALRYLSYRWGLPLEQILV-AGDSGN-D-EEMLRGLTLGVVVGNHD--P 205 (236)
T ss_pred HHHHhccCCEEEEEECCc-eEEEeeCCCChHHHHHHHHHHhCCCHHHEEE-EcCCcc-H-HHHHcCCCcEEEEcCCc--H
Confidence 777776677788888875 8999999999999999999999999999988 888888 8 99999999999999998 4
Q ss_pred HhhhhccCCCcccccccCCCceEEeccccCHHHHHHHHHHhcc
Q 001557 1008 RKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGV 1050 (1054)
Q Consensus 1008 ~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al~~~~~ 1050 (1054)
+++..++. ...++|.+..++||+++|+||++
T Consensus 206 ~~k~~a~~------------~~~~v~~~~~~~Gv~~~i~~~~~ 236 (236)
T TIGR02471 206 ELEGLRHQ------------QRIYFANNPHAFGILEGINHYDF 236 (236)
T ss_pred HHHHhhcC------------CcEEEcCCCChhHHHHHHHhhCC
Confidence 44443331 12257788899999999999985
No 71
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.96 E-value=5.8e-27 Score=264.72 Aligned_cols=267 Identities=25% Similarity=0.293 Sum_probs=208.2
Q ss_pred CcceEEEEcCC-CchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEe
Q 001557 305 IWPVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 383 (1054)
Q Consensus 305 ~~pDVIh~h~~-~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~ 383 (1054)
.+||+||+|.. ....++....+. ++|+|++.|+.......... . .. ..+...+..+|.+++
T Consensus 80 ~~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~------~-----~~------~~~~~~~~~~d~ii~ 141 (353)
T cd03811 80 EKPDVVISHLTTTPNVLALLAARL-GTKLIVWEHNSLSLELKRKL------R-----LL------LLIRKLYRRADKIVA 141 (353)
T ss_pred cCCCEEEEcCccchhHHHHHHhhc-CCceEEEEcCcchhhhccch------h-----HH------HHHHhhccccceEEE
Confidence 46999999987 444454444444 89999999998654422110 0 00 124557899999999
Q ss_pred cCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchh
Q 001557 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIW 463 (1054)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1054)
.|+...+.+...+.. +..++.+||||+|...+.+..... .
T Consensus 142 ~s~~~~~~~~~~~~~----------------------~~~~~~vi~~~~~~~~~~~~~~~~-----------------~- 181 (353)
T cd03811 142 VSEGVKEDLLKLLGI----------------------PPDKIEVIYNPIDIEEIRALAEEP-----------------L- 181 (353)
T ss_pred eccchhhhHHHhhcC----------------------CccccEEecCCcChhhcCcccchh-----------------h-
Confidence 999888776665542 112899999999998776432110 0
Q ss_pred HHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCC
Q 001557 464 SEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDL 542 (1054)
Q Consensus 464 ~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l 542 (1054)
......++++|+++||+.+.||++.+++|+..+... .+++.+ ++|+++. ...+.+++.++++
T Consensus 182 ----~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~--~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~ 244 (353)
T cd03811 182 ----ELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKE--GPDARLVILGDGPL-----------REELEALAKELGL 244 (353)
T ss_pred ----hcCCCCCceEEEEEecchhhcChHHHHHHHHHhhhc--CCCceEEEEcCCcc-----------HHHHHHHHHhcCC
Confidence 112245678999999999999999999999999643 345554 6787664 3445578888899
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHH
Q 001557 543 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQS 622 (1054)
Q Consensus 543 ~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~ 622 (1054)
.++|.+.|. .+++..+|+.| |++|+||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|.++
T Consensus 245 ~~~v~~~g~--~~~~~~~~~~~----d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~ 318 (353)
T cd03811 245 ADRVHFLGF--QSNPYPYLKAA----DLFVLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAA 318 (353)
T ss_pred CccEEEecc--cCCHHHHHHhC----CEEEeCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHH
Confidence 999999998 46899999999 999999999999999999999999999999999999999999999999999999
Q ss_pred H---HHHHHHHHhCHHHHHHHHHHHHHHH-hcCC
Q 001557 623 I---ADALLKLVSDKQLWERCRQNGLKNI-HQFS 652 (1054)
Q Consensus 623 l---a~aI~~ll~d~~~~~~~~~~~~~~v-~~fs 652 (1054)
+ +.+|..++.+++.++++++++++.+ ++|+
T Consensus 319 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 319 LAAAALALLDLLLDPELRERLAAAARERVAREYS 352 (353)
T ss_pred HHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc
Confidence 9 7778788889999999999777777 5665
No 72
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.96 E-value=4.2e-27 Score=270.64 Aligned_cols=265 Identities=19% Similarity=0.231 Sum_probs=196.7
Q ss_pred CcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchH---HHHHH-hCCCChhhhhhHhHHHHHHHHHHhhhccCCE
Q 001557 305 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKL---EQLLK-QGRLSRDEINTTYKIMRRIEAEELSLDASEI 380 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~---~~l~~-~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~ 380 (1054)
.+||+||++.... +..+....++|.++++|+..+..+ ..+.. .+...........+..++ .|..+++.+|.
T Consensus 82 ~~~D~v~~~~~~~---~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~ 156 (351)
T cd03804 82 SGYDLVISSSHAV---AKGVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRI--WDRRSAARVDY 156 (351)
T ss_pred cCCCEEEEcCcHH---hccccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHH--HHHHHhcCCCE
Confidence 4699999886422 222225568999999997432111 11111 111111111112222333 36678999999
Q ss_pred EEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCC
Q 001557 381 VITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDP 460 (1054)
Q Consensus 381 Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~ 460 (1054)
|+++|+...+.+.+.+.. +..+||||+|.+.|.+..
T Consensus 157 ii~~S~~~~~~~~~~~~~-------------------------~~~vi~~~~d~~~~~~~~------------------- 192 (351)
T cd03804 157 FIANSRFVARRIKKYYGR-------------------------DATVIYPPVDTDRFTPAE------------------- 192 (351)
T ss_pred EEECCHHHHHHHHHHhCC-------------------------CcEEECCCCCHhhcCcCC-------------------
Confidence 999999888876554432 568999999998776421
Q ss_pred chhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHc
Q 001557 461 PIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKY 540 (1054)
Q Consensus 461 ~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~ 540 (1054)
...+.++++||+.+.||++.+++|+..+. ..+ +|+|+++..+ .+.+
T Consensus 193 ------------~~~~~il~~G~~~~~K~~~~li~a~~~~~-----~~l-~ivG~g~~~~-----------~l~~----- 238 (351)
T cd03804 193 ------------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG-----KRL-VVIGDGPELD-----------RLRA----- 238 (351)
T ss_pred ------------CCCCEEEEEEcCccccChHHHHHHHHHCC-----CcE-EEEECChhHH-----------HHHh-----
Confidence 23567999999999999999999999873 233 4778876422 2222
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCH
Q 001557 541 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ 620 (1054)
Q Consensus 541 ~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~ 620 (1054)
+..++|.|+|+++.+++..+|+.| |++|+|+. |+||++++||||||+|||+++.||..|++.++.+|++++|.|+
T Consensus 239 ~~~~~V~~~g~~~~~~~~~~~~~a----d~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~ 313 (351)
T cd03804 239 KAGPNVTFLGRVSDEELRDLYARA----RAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTV 313 (351)
T ss_pred hcCCCEEEecCCCHHHHHHHHHhC----CEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCH
Confidence 345789999999999999999999 99999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHH
Q 001557 621 QSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSY 660 (1054)
Q Consensus 621 ~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~y 660 (1054)
++++++|.+++++++ .+++++.+.++.|+|+.+.+++
T Consensus 314 ~~la~~i~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 350 (351)
T cd03804 314 ESLAAAVERFEKNED---FDPQAIRAHAERFSESRFREKI 350 (351)
T ss_pred HHHHHHHHHHHhCcc---cCHHHHHHHHHhcCHHHHHHHh
Confidence 999999999999884 2344555556789999988765
No 73
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.96 E-value=2.8e-27 Score=281.97 Aligned_cols=279 Identities=17% Similarity=0.200 Sum_probs=210.5
Q ss_pred CcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhh--hhhHhHHHHHHHHHHhhhccCCEEE
Q 001557 305 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDE--INTTYKIMRRIEAEELSLDASEIVI 382 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~--i~~~~~~~~ri~~E~~~l~~ad~Vi 382 (1054)
.++||+|++.......+ .+.....+|.++++|+-..... ...... +...|... ....+.+|.||
T Consensus 210 ~~~di~i~dr~~~~~~~-~~~~~~~~~~v~~lH~~h~~~~-------~~~~~~~~~~~~y~~~------~~~~~~~D~iI 275 (500)
T TIGR02918 210 TKKDIIILDRSTGIGQA-VLENKGPAKLGVVVHAEHFSES-------ATNETYILWNNYYEYQ------FSNADYIDFFI 275 (500)
T ss_pred CCCCEEEEcCCcccchH-HHhcCCCceEEEEEChhhhcCc-------cCcchhHHHHHHHHHH------HhchhhCCEEE
Confidence 45899999875432222 3345568999999997432211 000000 11111111 12467789999
Q ss_pred ecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCch
Q 001557 383 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPI 462 (1054)
Q Consensus 383 ~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1054)
++|+...+.+...++.. +...+++.+||+|++...+.+..
T Consensus 276 ~~S~~~~~~l~~~~~~~-------------------~~~~~ki~viP~g~~~~~~~~~~--------------------- 315 (500)
T TIGR02918 276 TATDIQNQILKNQFKKY-------------------YNIEPRIYTIPVGSLDELQYPEQ--------------------- 315 (500)
T ss_pred ECCHHHHHHHHHHhhhh-------------------cCCCCcEEEEcCCCcccccCccc---------------------
Confidence 99998776655544321 11223899999998654433210
Q ss_pred hHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcC
Q 001557 463 WSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYD 541 (1054)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~ 541 (1054)
......|+++||+.+.||++.+|+|+..+.+ ..|++.| |+|+++. ...+.+++.+++
T Consensus 316 ---------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~--~~p~~~l~i~G~G~~-----------~~~l~~~i~~~~ 373 (500)
T TIGR02918 316 ---------ERKPFSIITASRLAKEKHIDWLVKAVVKAKK--SVPELTFDIYGEGGE-----------KQKLQKIINENQ 373 (500)
T ss_pred ---------ccCCeEEEEEeccccccCHHHHHHHHHHHHh--hCCCeEEEEEECchh-----------HHHHHHHHHHcC
Confidence 1234579999999999999999999999864 3456665 7788764 356778899999
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcccc-CcccceeeCCceEEeCCC--
Q 001557 542 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNG-GPVDIHRVLDNGLLVDPH-- 618 (1054)
Q Consensus 542 l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~G-g~~eiv~~~~~Gllv~p~-- 618 (1054)
+.+.|.|.|+. ++.++|+.| |++|+||..||||++++||||||+|||+++.+ |++|+|.++.+|+++++.
T Consensus 374 l~~~V~f~G~~---~~~~~~~~a----dv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~ 446 (500)
T TIGR02918 374 AQDYIHLKGHR---NLSEVYKDY----ELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEE 446 (500)
T ss_pred CCCeEEEcCCC---CHHHHHHhC----CEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCcc
Confidence 99999999963 799999999 99999999999999999999999999999985 899999999999999743
Q ss_pred --C----HHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Q 001557 619 --D----QQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSC 667 (1054)
Q Consensus 619 --d----~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~ 667 (1054)
| ++++|++|.++++ ++.++++++++++.++.|||+..+++|.++++++
T Consensus 447 ~~d~~~~~~~la~~I~~ll~-~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 447 EDDEDQIITALAEKIVEYFN-SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVREV 500 (500)
T ss_pred ccchhHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 3 8899999999995 5578999999999889999999999999998753
No 74
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.96 E-value=1.2e-28 Score=272.53 Aligned_cols=234 Identities=18% Similarity=0.135 Sum_probs=159.9
Q ss_pred CCEEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEc
Q 001557 768 RKYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYY 844 (1054)
Q Consensus 768 ~kkLiv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~ 844 (1054)
..|+|++|+|||| ++.+++.++++|++++++ |+.|+|||||++..+.++++++++. .++||+||+.|++
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~~~~~----g~~v~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~~ 73 (264)
T COG0561 2 MIKLLAFDLDGTLLDSNKTISPETKEALARLREK----GVKVVLATGRPLPDVLSILEELGLD----GPLITFNGALIYN 73 (264)
T ss_pred CeeEEEEcCCCCccCCCCccCHHHHHHHHHHHHC----CCEEEEECCCChHHHHHHHHHcCCC----ccEEEeCCeEEec
Confidence 3599999999999 467999999999999987 9999999999999999999999984 3799999999998
Q ss_pred CCCCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhh---c---cCCCCcc----C-------------cccccc
Q 001557 845 PSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAAS---V---NDKKGEE----G-------------KIVEED 901 (1054)
Q Consensus 845 ~~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~---~---~~~~~~~----~-------------~~v~~~ 901 (1054)
.+ +.+ ....+..+.+..++...... . ....... . ......
T Consensus 74 ~~---------~~i--------~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (264)
T COG0561 74 GG---------ELL--------FQKPLSREDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGRE 136 (264)
T ss_pred CC---------cEE--------eeecCCHHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccc
Confidence 73 121 11222333333332221110 0 0000000 0 000000
Q ss_pred cccCcceEEEEEecCCCCCccHHHHHHHHHHhcC--eEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEe
Q 001557 902 ESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQAL--RCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIA 979 (1054)
Q Consensus 902 ~~~~~~~kis~~~~~~~~~~~~~el~~~l~~~~~--~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~ 979 (1054)
.......++...... .....++.+.+..... ...+..+.+. ++||+|+++|||.||++|+++||++++++|| |
T Consensus 137 ~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~s~~~-~lei~~~g~~K~~al~~l~~~lgi~~~~v~a-f 211 (264)
T COG0561 137 AAELEDNKIIALDKD---HEILEELVEALRKRFPDLGLTVSSSGPI-SLDITPKGVSKGYALQRLAKLLGIKLEEVIA-F 211 (264)
T ss_pred hhhcCcceEEEEecC---hHhHHHHHHHHhhhccccceEEEEcCCc-eEEEecCCCchHHHHHHHHHHhCCCHHHeEE-e
Confidence 000000111111111 1234555555555433 2333444443 5999999999999999999999999999999 8
Q ss_pred CcCCCccccccccCcceEEEecCcchhHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHHHHhccc
Q 001557 980 GECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGVL 1051 (1054)
Q Consensus 980 GD~~d~D~~eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al~~~~~~ 1051 (1054)
||+.| | ++||+.+|+|||||||. .+++ ..+.++|.+.+++||+++|+++.++
T Consensus 212 GD~~N-D-~~Ml~~ag~gvam~Na~--~~~k----------------~~A~~vt~~n~~~Gv~~~l~~~~~~ 263 (264)
T COG0561 212 GDSTN-D-IEMLEVAGLGVAMGNAD--EELK----------------ELADYVTTSNDEDGVAEALEKLLLL 263 (264)
T ss_pred CCccc-c-HHHHHhcCeeeeccCCC--HHHH----------------hhCCcccCCccchHHHHHHHHHhcc
Confidence 88888 8 99999999999999998 3333 3334889999999999999998764
No 75
>PRK10976 putative hydrolase; Provisional
Probab=99.96 E-value=1.1e-28 Score=273.16 Aligned_cols=244 Identities=14% Similarity=0.099 Sum_probs=160.6
Q ss_pred CEEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcC
Q 001557 769 KYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 845 (1054)
Q Consensus 769 kkLiv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~ 845 (1054)
.|||++|+|||| ++.+++.++++|++++++ |+.|+|||||++.++.++++.++++ +++||+||+.|+..
T Consensus 2 ikli~~DlDGTLl~~~~~is~~~~~ai~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~~~ 73 (266)
T PRK10976 2 YQVVASDLDGTLLSPDHTLSPYAKETLKLLTAR----GIHFVFATGRHHVDVGQIRDNLEIK----SYMITSNGARVHDT 73 (266)
T ss_pred ceEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHC----CCEEEEEcCCChHHHHHHHHhcCCC----CeEEEcCCcEEECC
Confidence 489999999999 467999999999999997 9999999999999999999999983 47899999999964
Q ss_pred CCCCC--CCCC-------CccccC-ccc--hhhhccccCh----hhHHHHHHHhhhhccCCCCccCcccccccccCcceE
Q 001557 846 SSSTE--DNHG-------LPFLVD-LDY--RFHTEYRWGG----EGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHC 909 (1054)
Q Consensus 846 ~~~~~--~~~~-------~~~~~d-~~~--~~~i~~~w~~----e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~k 909 (1054)
.+..- .... +.+... ... .......|.. .......... ..... .............|
T Consensus 74 ~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~~i~k 146 (266)
T PRK10976 74 DGNLIFSHNLDRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEA---VFKYQ----LYEPGLLEPDGVSK 146 (266)
T ss_pred CCCEehhhcCCHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhc---CCcce----eechhhcccCCceE
Confidence 32110 0000 000000 000 0000001100 0000000000 00000 00000001112445
Q ss_pred EEEEecCCCCCccHHHHHHHHHHh-cCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCcccc
Q 001557 910 YAFEVTNPQMIPPVKELRKLMRIQ-ALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYE 988 (1054)
Q Consensus 910 is~~~~~~~~~~~~~el~~~l~~~-~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~ 988 (1054)
+.+...++ ..+.++.+.+... +..+.++.+.+. ++||+|+++|||.||++|++++||++++++| +||+.| | +
T Consensus 147 i~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~s~~~-~~eI~~~gvsKg~al~~l~~~lgi~~~~via-fGD~~N-D-i 219 (266)
T PRK10976 147 VFFTCDSH---EKLLPLEQAINARWGDRVNVSFSTLT-CLEVMAGGVSKGHALEAVAKKLGYSLKDCIA-FGDGMN-D-A 219 (266)
T ss_pred EEEEcCCH---HHHHHHHHHHHHHhCCcEEEEEeCCc-eEEEEcCCCChHHHHHHHHHHcCCCHHHeEE-EcCCcc-c-H
Confidence 54443221 2334555555443 345777777775 9999999999999999999999999999999 888989 8 9
Q ss_pred ccccCcceEEEecCcchhHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHHHHhcc
Q 001557 989 GLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGV 1050 (1054)
Q Consensus 989 eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al~~~~~ 1050 (1054)
+||+.+|+||||+||. .+++..++ ..++|.++++||++++|++|.+
T Consensus 220 ~Ml~~ag~~vAm~NA~--~~vK~~A~--------------~~~v~~~n~edGVa~~l~~~~~ 265 (266)
T PRK10976 220 EMLSMAGKGCIMGNAH--QRLKDLLP--------------ELEVIGSNADDAVPHYLRKLYL 265 (266)
T ss_pred HHHHHcCCCeeecCCc--HHHHHhCC--------------CCeecccCchHHHHHHHHHHhh
Confidence 9999999999999999 44444332 1157789999999999999854
No 76
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.96 E-value=2.1e-28 Score=271.61 Aligned_cols=242 Identities=15% Similarity=0.155 Sum_probs=160.6
Q ss_pred CEEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcC
Q 001557 769 KYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 845 (1054)
Q Consensus 769 kkLiv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~ 845 (1054)
.|||++|+|||| ++.+++.++++|++++++ |+.|+|||||++.++.+++++++++ +++||+||+.|+..
T Consensus 2 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~I~~~ 73 (272)
T PRK15126 2 ARLAAFDMDGTLLMPDHHLGEKTLSTLARLRER----DITLTFATGRHVLEMQHILGALSLD----AYLITGNGTRVHSL 73 (272)
T ss_pred ccEEEEeCCCcCcCCCCcCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHcCCC----CcEEecCCcEEEcC
Confidence 489999999999 467999999999999997 9999999999999999999999984 47999999999964
Q ss_pred CCCCC--CCCC-------CccccCcc--chhhhccccC----hhhHHHHHHHhhhhccCCCCccCcccccccccCcceEE
Q 001557 846 SSSTE--DNHG-------LPFLVDLD--YRFHTEYRWG----GEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCY 910 (1054)
Q Consensus 846 ~~~~~--~~~~-------~~~~~d~~--~~~~i~~~w~----~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ki 910 (1054)
.+..- .... +....... +.......|. ........ ......... .. .........+|+
T Consensus 74 ~~~~l~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~-~~~~~~~~~~ki 146 (272)
T PRK15126 74 EGELLHRQDLPADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAH-VYSGFRYQL-----ID-LKRLPAHGVTKI 146 (272)
T ss_pred CCCEEEeecCCHHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHH-HhcCCceEE-----ec-HHHccccCceEE
Confidence 32110 0000 00000000 0000000010 00000000 000000000 00 000011234566
Q ss_pred EEEecCCCCCccHHHHHHHHHHh-cCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccc
Q 001557 911 AFEVTNPQMIPPVKELRKLMRIQ-ALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEG 989 (1054)
Q Consensus 911 s~~~~~~~~~~~~~el~~~l~~~-~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~e 989 (1054)
.+.. ++ ..++++.+.+... ...+.+++|.+. ++||+|+++|||+||++|++++||++++++| |||+.| | ++
T Consensus 147 ~~~~-~~---~~~~~~~~~l~~~~~~~~~~~~s~~~-~~eI~~~g~sKg~al~~l~~~~gi~~~~v~a-fGD~~N-D-i~ 218 (272)
T PRK15126 147 CFCG-DH---DDLTRLQIQLNEALGERAHLCFSATD-CLEVLPVGCNKGAALAVLSQHLGLSLADCMA-FGDAMN-D-RE 218 (272)
T ss_pred EEEC-CH---HHHHHHHHHHHHHhcCCEEEEEcCCc-EEEeecCCCChHHHHHHHHHHhCCCHHHeEE-ecCCHH-H-HH
Confidence 5442 22 2345666666543 345777777775 9999999999999999999999999999999 888989 8 99
Q ss_pred cccCcceEEEecCcchhHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHHHHhc
Q 001557 990 LLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLG 1049 (1054)
Q Consensus 990 ML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al~~~~ 1049 (1054)
||+.+|+||||+||. .+++..++ .+ .+|.++++|||+++|+++-
T Consensus 219 Ml~~ag~~vAm~Na~--~~vK~~A~-------------~~-~v~~~n~edGva~~l~~~~ 262 (272)
T PRK15126 219 MLGSVGRGFIMGNAM--PQLRAELP-------------HL-PVIGHCRNQAVSHYLTHWL 262 (272)
T ss_pred HHHHcCCceeccCCh--HHHHHhCC-------------CC-eecCCCcchHHHHHHHHHh
Confidence 999999999999998 55555444 11 2667999999999999874
No 77
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.96 E-value=1.4e-28 Score=272.88 Aligned_cols=245 Identities=13% Similarity=0.084 Sum_probs=159.5
Q ss_pred CEEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcC
Q 001557 769 KYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 845 (1054)
Q Consensus 769 kkLiv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~ 845 (1054)
.|||++|+|||| ++.+++.++++|++++++ |+.|+|||||++.++.++++++++.. ..+++||+||+.|++.
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~~-~~~~~I~~NGa~i~~~ 77 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDHTISPAVKQAIAAARAK----GVNVVLTTGRPYAGVHRYLKELHMEQ-PGDYCITNNGALVQKA 77 (270)
T ss_pred eEEEEEecCCcCcCCCCccCHHHHHHHHHHHHC----CCEEEEecCCChHHHHHHHHHhCCCC-CCCeEEEcCCeEEEEC
Confidence 589999999999 467999999999999997 99999999999999999999999841 1358999999999963
Q ss_pred C-CCC--CCCCCC-------ccccCccchhhh--ccccC-----hhhHHHHHHHhhhhccCCCCccCcccccccccCcce
Q 001557 846 S-SST--EDNHGL-------PFLVDLDYRFHT--EYRWG-----GEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIH 908 (1054)
Q Consensus 846 ~-~~~--~~~~~~-------~~~~d~~~~~~i--~~~w~-----~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 908 (1054)
. +.. ...... .+.........+ ...+. ...... ...... ...... ..+.+-.......
T Consensus 78 ~~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~---~~~~~~~~~~~~~ 152 (270)
T PRK10513 78 ADGETVAQTALSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTV-HESFLT-GIPLVF---REVEKMDPNLQFP 152 (270)
T ss_pred CCCCEEEecCCCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHH-Hhhhhc-cCCccc---cchhhccccCCce
Confidence 2 110 000000 000000000000 00000 000000 000000 000000 0000000011234
Q ss_pred EEEEEecCCCCCccHHHHHHHHHHh-cCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccc
Q 001557 909 CYAFEVTNPQMIPPVKELRKLMRIQ-ALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDY 987 (1054)
Q Consensus 909 kis~~~~~~~~~~~~~el~~~l~~~-~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~ 987 (1054)
|+.+. ..+ ..+.++.+.+... ...+.++.+.+. ++||+|+++|||+||++|++++||++++++| +||+.| |
T Consensus 153 k~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~s~~~-~~eI~~~gvsKg~al~~l~~~~gi~~~~v~a-fGD~~N-D- 224 (270)
T PRK10513 153 KVMMI-DEP---EILDAAIARIPAEVKERYTVLKSAPY-FLEILDKRVNKGTGVKSLAEHLGIKPEEVMA-IGDQEN-D- 224 (270)
T ss_pred EEEEe-CCH---HHHHHHHHHhHHHhcCcEEEEEecCe-eEEEeCCCCChHHHHHHHHHHhCCCHHHEEE-ECCchh-h-
Confidence 44432 211 1234444444332 345777788775 9999999999999999999999999999999 888888 8
Q ss_pred cccccCcceEEEecCcchhHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHHHHhc
Q 001557 988 EGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLG 1049 (1054)
Q Consensus 988 ~eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al~~~~ 1049 (1054)
++||+.+|+||||+||. .+++..++ +||.+++++||+++|+++.
T Consensus 225 i~Ml~~ag~~vAm~NA~--~~vK~~A~----------------~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 225 IAMIEYAGVGVAMGNAI--PSVKEVAQ----------------FVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred HHHHHhCCceEEecCcc--HHHHHhcC----------------eeccCCCcchHHHHHHHHh
Confidence 99999999999999999 44444444 8999999999999999975
No 78
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.96 E-value=2.7e-26 Score=268.96 Aligned_cols=374 Identities=16% Similarity=0.154 Sum_probs=238.4
Q ss_pred ceEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccC------Cccccccc
Q 001557 165 KLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYA------EPSEMLNR 238 (1054)
Q Consensus 165 ~mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~------~~~~~l~~ 238 (1054)
+-.|.+++.-.+ |. -||-.+.-.. =|-.|++.++ ++|+++.+=....+..-.|+ .|.+...-
T Consensus 322 ~r~~~ivTtAsl--------PW--mTGtavnpL~-rAayLa~~~~-~~VtlviPWl~~~dq~~vy~~~~~F~~p~eQe~~ 389 (794)
T PLN02501 322 KRHVAIVTTASL--------PW--MTGTAVNPLF-RAAYLAKSAK-QNVTLLVPWLCKSDQELVYPNNLTFSSPEEQESY 389 (794)
T ss_pred CCeEEEEEcccC--------cc--cccccccHHH-HHHHhcccCC-ceEEEEEecCCccccccccCCCcccCCHHHHHHH
Confidence 346888887544 22 4555554433 4667898866 99999986433212111222 11111000
Q ss_pred -ccccccccccCCCCCeEEEEccCCCCCcc-cccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCC-
Q 001557 239 -KNTENLMQGLGESSGAYIIRIPFGPKDKY-VQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYA- 315 (1054)
Q Consensus 239 -~~~~~~~~~~~~~~g~~i~rip~g~~~~~-l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~- 315 (1054)
..+ +.+.++-..+..|...|- +| ..+..+.|- .. +.+.|. .+.|||||.+.+
T Consensus 390 ir~w--l~~r~g~~~~~~i~fYpg----~~~~~~~SI~p~-----gd-------I~~~L~-------~f~PDVVHLatP~ 444 (794)
T PLN02501 390 IRNW--LEERIGFKADFKISFYPG----KFSKERRSIIPA-----GD-------TSQFIP-------SKDADIAILEEPE 444 (794)
T ss_pred HHHH--HHHhcCCCCCceEEeecc----hhccCCccccch-----HH-------HHHHhh-------ccCCCEEEECCch
Confidence 000 112233344555555443 22 223333332 11 112222 267999999986
Q ss_pred CchHH--HHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhc-cCCEEEecCHHHHHHH
Q 001557 316 DAGDA--AALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLD-ASEIVITSTRQEIEEQ 392 (1054)
Q Consensus 316 ~a~~~--a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~-~ad~Vi~~S~~~~~~~ 392 (1054)
..|+. +...+++++ |+|.++|.-...++... ..|.+. ...+++++++ ..+ +||.|+++|.... .+
T Consensus 445 ~LGw~~~Glr~ArKl~-PVVasyHTny~eYl~~y-~~g~L~----~~llk~l~~~-----v~r~hcD~VIaPS~atq-~L 512 (794)
T PLN02501 445 HLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKRE-KNGALQ----AFFVKHINNW-----VTRAYCHKVLRLSAATQ-DL 512 (794)
T ss_pred hhccHHHHHHHHHHcC-CeEEEEeCCcHHHHhHh-cchhHH----HHHHHHHHHH-----HHHhhCCEEEcCCHHHH-Hh
Confidence 45666 788888889 99999998766544332 112111 1111122221 111 2899999996544 21
Q ss_pred HhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCC
Q 001557 393 WRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSN 472 (1054)
Q Consensus 393 ~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (1054)
.. ++....+|||.+.|.|..... ...++...
T Consensus 513 ----~~-------------------------~vI~nVnGVDte~F~P~~r~~--------------------~~r~lgi~ 543 (794)
T PLN02501 513 ----PK-------------------------SVICNVHGVNPKFLKIGEKVA--------------------EERELGQQ 543 (794)
T ss_pred ----cc-------------------------cceeecccccccccCCcchhH--------------------HHHhcCCc
Confidence 10 222222699999998753210 11222222
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001557 473 PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKH 551 (1054)
Q Consensus 473 ~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~ 551 (1054)
...+.++|+||+.+.||++.||+|+..+.. ..+++.| |+|+|++ ...+.+++.++++ .|.|+|.
T Consensus 544 ~~~kgiLfVGRLa~EKGld~LLeAla~L~~--~~pnvrLvIVGDGP~-----------reeLe~la~eLgL--~V~FLG~ 608 (794)
T PLN02501 544 AFSKGAYFLGKMVWAKGYRELIDLLAKHKN--ELDGFNLDVFGNGED-----------AHEVQRAAKRLDL--NLNFLKG 608 (794)
T ss_pred cccCceEEEEcccccCCHHHHHHHHHHHHh--hCCCeEEEEEcCCcc-----------HHHHHHHHHHcCC--EEEecCC
Confidence 334568999999999999999999998853 3356665 8899986 3456677777776 4889888
Q ss_pred CCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHH
Q 001557 552 HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLV 631 (1054)
Q Consensus 552 ~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll 631 (1054)
.+++..+|+.+ ||||+||..|+||++++||||||+|||+++.||. +++.++.+|+++ .|+++++++|.+++
T Consensus 609 --~dd~~~lyasa----DVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~--~D~EafAeAI~~LL 679 (794)
T PLN02501 609 --RDHADDSLHGY----KVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTY--KTSEDFVAKVKEAL 679 (794)
T ss_pred --CCCHHHHHHhC----CEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEec--CCHHHHHHHHHHHH
Confidence 45677899999 9999999999999999999999999999999985 446677788876 59999999999999
Q ss_pred hCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 001557 632 SDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 632 ~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~ 665 (1054)
+++.....+. ....|||+..++++++.-+
T Consensus 680 sd~~~rl~~~-----a~~~~SWeAaadrLle~~~ 708 (794)
T PLN02501 680 ANEPQPLTPE-----QRYNLSWEAATQRFMEYSD 708 (794)
T ss_pred hCchhhhHHH-----HHhhCCHHHHHHHHHHhhc
Confidence 9876443222 1348999999999987654
No 79
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.95 E-value=1.6e-26 Score=269.18 Aligned_cols=325 Identities=17% Similarity=0.212 Sum_probs=213.5
Q ss_pred CcceEEEEcCCCchHHHHHHH-ccCCCCEEEEeCCCccchHHHHHHhCC---------CChhhhhhHhHHHHHHHHHHhh
Q 001557 305 IWPVAIHGHYADAGDAAALLS-GALNVPMVFTGHSLGRDKLEQLLKQGR---------LSRDEINTTYKIMRRIEAEELS 374 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~-~~~~iP~V~t~H~l~~~~~~~l~~~g~---------~~~~~i~~~~~~~~ri~~E~~~ 374 (1054)
..+||+|+|.|.++..+..++ +..++|+|+|.|....... +..|. +........+.+..+...|+.+
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~---l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~a 223 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRY---LCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAA 223 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccc---cccCCcccchhhhhcchhhhhhcccchHHHHHHHHH
Confidence 569999999999999999998 6689999999997643221 11111 0011111223455666679999
Q ss_pred hccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCC
Q 001557 375 LDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGS 454 (1054)
Q Consensus 375 l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~ 454 (1054)
...||.|+++|+.+..+...+|+. +. .. |||||+|...|.+.... ++.
T Consensus 224 a~~Ad~fttVS~it~~E~~~Ll~~----------------------~p-d~-ViPNGid~~~f~~~~e~--------~~~ 271 (590)
T cd03793 224 AHCAHVFTTVSEITAYEAEHLLKR----------------------KP-DV-VLPNGLNVKKFSALHEF--------QNL 271 (590)
T ss_pred HhhCCEEEECChHHHHHHHHHhCC----------------------CC-CE-EeCCCcchhhcccchhh--------hhh
Confidence 999999999999999998877754 22 23 99999999999753211 001
Q ss_pred CCCCCCchhHH-----HhhhcCCCCCcEEEE-EeCCCC-CCCHHHHHHHHHhcccccC--CC--cEE-EEE-ecC---CC
Q 001557 455 PASPDPPIWSE-----IMHFFSNPRKPMILA-LARPDP-KKNITTLVKAFGECRPLRE--LA--NLT-LIM-GNR---DD 518 (1054)
Q Consensus 455 ~~~~~~~~~~~-----~~~~~~~~~~~~Il~-vgRld~-~Kgi~~ll~A~~~l~~~~~--~~--~l~-LIi-G~~---~~ 518 (1054)
.......+.+. +.++..++++++++| +||+.+ .||++.+|+|+.++...-. .. .++ +|+ -.. -.
T Consensus 272 ~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~ 351 (590)
T cd03793 272 HAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFN 351 (590)
T ss_pred hHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcC
Confidence 11122222332 223344568888888 799999 9999999999999864211 12 233 333 211 11
Q ss_pred chhhhhch-----HHHHHHHHHH---------------------------------------------------------
Q 001557 519 IDEMSGTN-----AALLLSILKL--------------------------------------------------------- 536 (1054)
Q Consensus 519 ~~~~~~~~-----~~~~~~i~~l--------------------------------------------------------- 536 (1054)
.+.++.+. .+.+..|++.
T Consensus 352 ~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~i 431 (590)
T cd03793 352 VESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPI 431 (590)
T ss_pred HHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHH
Confidence 22222211 1111111111
Q ss_pred ---HHHcCCCC----C--EEe-CCCCCC------CcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcccc
Q 001557 537 ---IDKYDLYG----Q--VAY-PKHHKQ------SDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNG 600 (1054)
Q Consensus 537 ---~~~~~l~~----~--V~~-~g~~~~------~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~G 600 (1054)
+.+.++.+ + |.| |-+++. .+..++|+.| |++|+||++||||++++||||||+|||+|+.+
T Consensus 432 l~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~----dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~ 507 (590)
T cd03793 432 LNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGC----HLGVFPSYYEPWGYTPAECTVMGIPSITTNLS 507 (590)
T ss_pred HHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhc----eEEEeccccCCCCcHHHHHHHcCCCEEEccCc
Confidence 12222211 1 222 222222 2478999999 99999999999999999999999999999999
Q ss_pred Cc----ccceeeC-CceEEeC-------CCCHHHHHHHHHHHHhCHHHHHHHHHHHH--HHHhcCCHHHHHHHHHHHHHH
Q 001557 601 GP----VDIHRVL-DNGLLVD-------PHDQQSIADALLKLVSDKQLWERCRQNGL--KNIHQFSWPEHCKSYLSRISS 666 (1054)
Q Consensus 601 g~----~eiv~~~-~~Gllv~-------p~d~~~la~aI~~ll~d~~~~~~~~~~~~--~~v~~fsw~~~a~~yl~~l~~ 666 (1054)
|+ .|++.++ ..|++|. +.++++|+++|.+++.. ..++++..++. +..+.|+|++.+..|.+.+..
T Consensus 508 gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~ 586 (590)
T cd03793 508 GFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQL 586 (590)
T ss_pred chhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 88 5665544 3578886 45678899999998864 45666665555 555799999999999999986
Q ss_pred hhh
Q 001557 667 CKQ 669 (1054)
Q Consensus 667 ~~~ 669 (1054)
.+.
T Consensus 587 Al~ 589 (590)
T cd03793 587 ALS 589 (590)
T ss_pred Hhh
Confidence 543
No 80
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.95 E-value=2e-27 Score=281.98 Aligned_cols=357 Identities=15% Similarity=0.144 Sum_probs=238.4
Q ss_pred CCeEEEEccCCCCC-----cccccccCCCChHHH----------HHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCC
Q 001557 252 SGAYIIRIPFGPKD-----KYVQKELLWPHIPEF----------VDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYAD 316 (1054)
Q Consensus 252 ~g~~i~rip~g~~~-----~~l~k~~l~~~l~~f----------~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~ 316 (1054)
.++.++.+...+.. .-..++.+||.+..+ ..........++..+.+.+. ..|+||.|++.
T Consensus 67 ~~~~~~~v~l~~~~~~~~y~~f~~~~LWp~~H~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~-----~~d~iwihDyh 141 (460)
T cd03788 67 GEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHYRLDLARFDREDWEAYVRVNRKFADAIAEVLR-----PGDLVWVHDYH 141 (460)
T ss_pred CCceEEEeeCCHHHHHHHHHHhhhhhcchhhcCCCCccccCHHHHHHHHHHHHHHHHHHHHhcC-----CCCEEEEeChh
Confidence 35666666654321 113356778755432 22223333444555555432 36999999987
Q ss_pred chHHHHHHHcc-CCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhh
Q 001557 317 AGDAAALLSGA-LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRL 395 (1054)
Q Consensus 317 a~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~ 395 (1054)
...++.++.+. .+.|+++..|-.++..- .+... .....+. ..+..+|+|.+.|...+..+...
T Consensus 142 l~llp~~lr~~~~~~~i~~f~HipfP~~e-~~~~l--------p~~~~ll-------~~~l~~D~igF~t~~~~~~Fl~~ 205 (460)
T cd03788 142 LLLLPQMLRERGPDARIGFFLHIPFPSSE-IFRCL--------PWREELL-------RGLLGADLIGFQTERYARNFLSC 205 (460)
T ss_pred hhHHHHHHHhhCCCCeEEEEEeCCCCChH-HHhhC--------CChHHHH-------HHHhcCCEEEECCHHHHHHHHHH
Confidence 77777776544 46899999997765431 11100 0011111 23556999999998877765543
Q ss_pred hcCCChHHHHHHHHh--HhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhh-hcCC
Q 001557 396 YDGFDPVLERKLRAR--IKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMH-FFSN 472 (1054)
Q Consensus 396 y~~~~~~l~~~l~~r--~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 472 (1054)
... .+... ...++...|+.. ++.+||||||.+.|.+.... +......++ ....
T Consensus 206 ~~~-------~l~~~~~~~~~i~~~g~~~-~i~vip~GID~~~f~~~~~~----------------~~~~~~~~~~~~~~ 261 (460)
T cd03788 206 CSR-------LLGLEVTDDGGVEYGGRRV-RVGAFPIGIDPDAFRKLAAS----------------PEVQERAAELRERL 261 (460)
T ss_pred HHH-------HcCCcccCCceEEECCEEE-EEEEEeCeEcHHHHHHHhcC----------------chhHHHHHHHHHhc
Confidence 211 11000 013444455443 79999999999999753211 111111111 1224
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EEecCC--CchhhhhchHHHHHHHHHHHHHc-------
Q 001557 473 PRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSGTNAALLLSILKLIDKY------- 540 (1054)
Q Consensus 473 ~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~--~l~L-IiG~~~--~~~~~~~~~~~~~~~i~~l~~~~------- 540 (1054)
+++++|+++||+++.||+..+|+||+.+.+..+.. +++| ++|+.. +... ..++...+.++++++
T Consensus 262 ~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~----~~~l~~~l~~~v~~in~~~g~~ 337 (460)
T cd03788 262 GGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPE----YQELRREVEELVGRINGKFGTL 337 (460)
T ss_pred CCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHH----HHHHHHHHHHHHHHHHhccCCC
Confidence 67899999999999999999999999987544432 3444 454321 1111 122344444444443
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCC----EEEccccCcccceeeCCceEEeC
Q 001557 541 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLP----IVATKNGGPVDIHRVLDNGLLVD 616 (1054)
Q Consensus 541 ~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~P----VIat~~Gg~~eiv~~~~~Gllv~ 616 (1054)
++.+.+.+.|.++.+++.++|+.| |+||+||..||||++++||||||+| ||+|+.+|..+. +.+|++|+
T Consensus 338 ~~~~v~~~~g~v~~~el~~~y~~a----Dv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~lv~ 410 (460)
T cd03788 338 DWTPVRYLYRSLPREELAALYRAA----DVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGALLVN 410 (460)
T ss_pred CceeEEEEeCCCCHHHHHHHHHhc----cEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh---cCCCEEEC
Confidence 245566777889999999999999 9999999999999999999999999 898888777776 46899999
Q ss_pred CCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 001557 617 PHDQQSIADALLKLVSDK-QLWERCRQNGLKNIHQFSWPEHCKSYLSRI 664 (1054)
Q Consensus 617 p~d~~~la~aI~~ll~d~-~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l 664 (1054)
|+|++++|++|.++++++ ++++.+++++++.++.|||..|+++|+..+
T Consensus 411 p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 411 PYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 999999999999999965 667777888888889999999999998764
No 81
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.95 E-value=2.5e-26 Score=268.80 Aligned_cols=362 Identities=13% Similarity=0.106 Sum_probs=255.2
Q ss_pred CeEEEEccCCCCC-----cccccccCCCChHH----------HHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCc
Q 001557 253 GAYIIRIPFGPKD-----KYVQKELLWPHIPE----------FVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADA 317 (1054)
Q Consensus 253 g~~i~rip~g~~~-----~~l~k~~l~~~l~~----------f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a 317 (1054)
++....++..+.. ....+..+||.+.. ...........++.++.+.+.. -|+|-.|++..
T Consensus 69 ~~~~~~v~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-----~d~vWVhDYhL 143 (487)
T TIGR02398 69 KLTAARIPLSKEQVDIFYHITSKEAFWPILHTFPERFQFREDDWQVFLKVNRAFAEAACLEAAE-----GATVWVHDYNL 143 (487)
T ss_pred ceeEEEEeCCHHHHHHHHhhhhhccccccccCCccccCcCHHHHHHHHHHHHHHHHHHHHhcCC-----CCEEEEecchh
Confidence 4555666654321 12345667775432 2222333344455555554322 37999999877
Q ss_pred hHHHHHHHcc-CCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhh
Q 001557 318 GDAAALLSGA-LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLY 396 (1054)
Q Consensus 318 ~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y 396 (1054)
.+++.++.+. ...++-|..|-.++..- -+. .....+.| -..+-.+|+|-+.|..+++.+....
T Consensus 144 ~llp~~LR~~~~~~~IgfFlHiPFPs~e-ifr------------~LP~r~~l---l~glL~aDliGFqt~~y~~~Fl~~~ 207 (487)
T TIGR02398 144 WLVPGYIRQLRPDLKIAFFHHTPFPSAD-VFN------------ILPWREQI---IGSLLCCDYIGFHIPRYVENFVDAA 207 (487)
T ss_pred hHHHHHHHHhCCCCeEEEEeeCCCCChH-HHh------------hCCchHHH---HHHHhcCCeEEeCCHHHHHHHHHHH
Confidence 7788877654 45788899998765431 110 00011111 2357789999999999988766532
Q ss_pred cCCChHHHHHHHHhH----------------------hcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCC
Q 001557 397 DGFDPVLERKLRARI----------------------KRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGS 454 (1054)
Q Consensus 397 ~~~~~~l~~~l~~r~----------------------~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~ 454 (1054)
. +.|+.+. .-+|...|+.. ++.++|+|||++.|.+.....
T Consensus 208 ~-------r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v-~v~~~PiGID~~~f~~~~~~~---------- 269 (487)
T TIGR02398 208 R-------GLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVV-KLGAHPVGTDPERIRSALAAA---------- 269 (487)
T ss_pred H-------HHhCCccccccccccccccccccccccccccceeECCEEE-EEEEEECEecHHHHHHHhcCc----------
Confidence 2 2222111 11355556666 799999999999997532110
Q ss_pred CCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EEecC-----CCchhhhhch
Q 001557 455 PASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNR-----DDIDEMSGTN 526 (1054)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~--~l~L-IiG~~-----~~~~~~~~~~ 526 (1054)
......+.++..+ .++++|+++||+|+.|||..+|+||+++++.+|.. +++| ++|.. +.|++++.+.
T Consensus 270 ---~~~~~~~~lr~~~--~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v 344 (487)
T TIGR02398 270 ---SIREMMERIRSEL--AGVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQI 344 (487)
T ss_pred ---hHHHHHHHHHHHc--CCceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCcccchHHHHHHHHH
Confidence 1112223334333 37899999999999999999999999997666654 4555 34432 5667788888
Q ss_pred HHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCC----CEEEccccCc
Q 001557 527 AALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGL----PIVATKNGGP 602 (1054)
Q Consensus 527 ~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~----PVIat~~Gg~ 602 (1054)
.+...+||+..++.++.+.+++.+.++.+++.++|+.| ||+++||++||||||.+||+||+. |+|.|..+|.
T Consensus 345 ~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~A----DV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaGa 420 (487)
T TIGR02398 345 EQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMA----DVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGA 420 (487)
T ss_pred HHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhC----CEEEECccccccCcchhhHHhhhcCCCCCEEEeccccc
Confidence 88888999999999999999999999999999999999 999999999999999999999976 7777776665
Q ss_pred ccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHH-HHHHHHHHHhcCCHHHHHHHHHHHHH
Q 001557 603 VDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWER-CRQNGLKNIHQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 603 ~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~-~~~~~~~~v~~fsw~~~a~~yl~~l~ 665 (1054)
.+.+ .++++|||+|++++|++|.++|++|...++ ..+..++.+..++...|++.|+..+.
T Consensus 421 a~~l---~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l~ 481 (487)
T TIGR02398 421 AVEL---KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWADEFLAAVS 481 (487)
T ss_pred hhhc---CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 5443 469999999999999999999997775544 44555566699999999999998775
No 82
>PHA01630 putative group 1 glycosyl transferase
Probab=99.95 E-value=4.3e-26 Score=258.89 Aligned_cols=255 Identities=13% Similarity=0.099 Sum_probs=184.3
Q ss_pred EcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhh-hccCCEEEecCHHHHH
Q 001557 312 GHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELS-LDASEIVITSTRQEIE 390 (1054)
Q Consensus 312 ~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~-l~~ad~Vi~~S~~~~~ 390 (1054)
.|+.......+......|+|+|++.|+..+ +.+. .+.+. .+.+|.|+++|+...+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~----------------------l~~~--~~~~~~~~~ad~ii~~S~~~~~ 107 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTDA----------------------ISHT--ALYFFRNQPVDEIVVPSQWSKN 107 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeech----------------------hhHH--HHHHHhhccCCEEEECCHHHHH
Confidence 444445556665566679999999998321 1111 13345 6789999999998877
Q ss_pred HHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhc
Q 001557 391 EQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFF 470 (1054)
Q Consensus 391 ~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (1054)
.+..... . ...++.+||||||.+.|.+....
T Consensus 108 ~l~~~g~--~--------------------~~~~i~vIpNGVd~~~f~~~~~~--------------------------- 138 (331)
T PHA01630 108 AFYTSGL--K--------------------IPQPIYVIPHNLNPRMFEYKPKE--------------------------- 138 (331)
T ss_pred HHHHcCC--C--------------------CCCCEEEECCCCCHHHcCCCccc---------------------------
Confidence 6533211 0 01279999999999888643210
Q ss_pred CCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeC
Q 001557 471 SNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYP 549 (1054)
Q Consensus 471 ~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~ 549 (1054)
..+..+++++|++.+.||++.+|+|+..+.+. .+++.+ ++|++.. . .++ .++.+ +.
T Consensus 139 -~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~--~~~~~llivG~~~~--~---------~~l------~~~~~---~~ 195 (331)
T PHA01630 139 -KPHPCVLAILPHSWDRKGGDIVVKIFHELQNE--GYDFYFLIKSSNML--D---------PRL------FGLNG---VK 195 (331)
T ss_pred -cCCCEEEEEeccccccCCHHHHHHHHHHHHhh--CCCEEEEEEeCccc--c---------hhh------ccccc---ee
Confidence 12345666778899999999999999998643 345554 6675432 1 011 12222 34
Q ss_pred CCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCC------------
Q 001557 550 KHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDP------------ 617 (1054)
Q Consensus 550 g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p------------ 617 (1054)
+.++.+++..+|+.| |+||+||..|+||++++||||||+|||+|+.||..|++.++.+|+++++
T Consensus 196 ~~v~~~~l~~~y~~a----Dv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~ 271 (331)
T PHA01630 196 TPLPDDDIYSLFAGC----DILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPI 271 (331)
T ss_pred ccCCHHHHHHHHHhC----CEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCc
Confidence 567889999999999 9999999999999999999999999999999999999999888777642
Q ss_pred -------CCHHHHHHHHHHHHhCH--HHHH-HHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 001557 618 -------HDQQSIADALLKLVSDK--QLWE-RCRQNGLKNIHQFSWPEHCKSYLSRISS 666 (1054)
Q Consensus 618 -------~d~~~la~aI~~ll~d~--~~~~-~~~~~~~~~v~~fsw~~~a~~yl~~l~~ 666 (1054)
.|.+++++++.+++.++ +.++ .+..++....++|||+.++++|+++|++
T Consensus 272 ~~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 272 HVGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred ccccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 37888999999999863 4444 4444444445899999999999999874
No 83
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.95 E-value=1.5e-26 Score=256.58 Aligned_cols=242 Identities=12% Similarity=0.081 Sum_probs=159.4
Q ss_pred CCCEEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEE
Q 001557 767 RRKYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELY 843 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~ 843 (1054)
+.+++|++|||||| .+.+++.++++|++++++ |+.|+|||||++.++.+++++++++ .+++||+||+.||
T Consensus 5 ~~~~lI~~DlDGTLL~~~~~i~~~~~~ai~~l~~~----Gi~~viaTGR~~~~i~~~~~~l~~~---~~~~I~~NGa~I~ 77 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDSHTYDWQPAAPWLTRLREA----QVPVILCSSKTAAEMLPLQQTLGLQ---GLPLIAENGAVIQ 77 (271)
T ss_pred CCCeEEEEeCccCCcCCCCcCcHHHHHHHHHHHHc----CCeEEEEcCCCHHHHHHHHHHhCCC---CCcEEEeCCCEEE
Confidence 56799999999999 356889999999999997 9999999999999999999999983 2469999999999
Q ss_pred cCCCCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhh-ccC--C-CCc-----------c-CcccccccccCcc
Q 001557 844 YPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAAS-VND--K-KGE-----------E-GKIVEEDESRSTI 907 (1054)
Q Consensus 844 ~~~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~-~~~--~-~~~-----------~-~~~v~~~~~~~~~ 907 (1054)
......... .+ .. .......+.+..++..+... ... . ... . ....... .....
T Consensus 78 ~~~~~~~~~---~~---~~----~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 146 (271)
T PRK03669 78 LDEQWQDHP---DF---PR----IISGISHGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALAR-LHEAS 146 (271)
T ss_pred ecCcccCCC---Cc---eE----eecCCCHHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHh-ccccC
Confidence 753211000 00 00 01111222222222111100 000 0 000 0 0000000 00011
Q ss_pred eEEEEEecCCCCCccHHHHHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCC---CccCEEEEeCcCCC
Q 001557 908 HCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGI---DLSNVVVIAGECGD 984 (1054)
Q Consensus 908 ~kis~~~~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI---~~e~vvaf~GD~~d 984 (1054)
.++.+. .. ...+.++.+.+... .++++.+ + .++||+|+++|||+||++|++++|| ++++++| +||+.|
T Consensus 147 ~~~~~~-~~---~~~~~~~~~~l~~~--~~~~~~~-~-~~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~via-fGDs~N 217 (271)
T PRK03669 147 VTLIWR-DS---DERMAQFTARLAEL--GLQFVQG-A-RFWHVLDASAGKDQAANWLIATYQQLSGTRPTTLG-LGDGPN 217 (271)
T ss_pred ceeEec-CC---HHHHHHHHHHHHHC--CCEEEec-C-eeEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEE-EcCCHH
Confidence 233222 11 12345566666543 4555553 3 3899999999999999999999999 9999999 888999
Q ss_pred ccccccccCcceEEEecCcchhHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHHHHhc
Q 001557 985 TDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLG 1049 (1054)
Q Consensus 985 ~D~~eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al~~~~ 1049 (1054)
| ++||+.+|+||||||+....+ -++..+....|+|...++|||.++|+||-
T Consensus 218 -D-i~Ml~~ag~gvAM~~~~~~~~------------~l~~~~~~~~~~~~~~~~~g~~~~l~~~~ 268 (271)
T PRK03669 218 -D-APLLDVMDYAVVVKGLNREGV------------HLQDDDPARVYRTQREGPEGWREGLDHFF 268 (271)
T ss_pred -H-HHHHHhCCEEEEecCCCCCCc------------ccccccCCceEeccCCCcHHHHHHHHHHH
Confidence 8 999999999999998771100 11234556778999999999999999973
No 84
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.95 E-value=8.1e-26 Score=261.42 Aligned_cols=422 Identities=15% Similarity=0.117 Sum_probs=287.3
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccccccc
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 246 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 246 (1054)
++++||. =+ |+.-++.+..||.... |...|.+.+| +.+--.....+ ....+.
T Consensus 3 rLivVSN-Rl----p~~~~~~~~~GGL~~a---L~~~l~~~~g---~WvGW~g~~~~--------~~~~~~--------- 54 (474)
T PRK10117 3 RLVVVSN-RI----APPDEHKASAGGLAVG---ILGALKAAGG---LWFGWSGETGN--------EDQPLK--------- 54 (474)
T ss_pred CEEEEEC-CC----cCCCCCCcCCCCcHHH---HHHHHHhcCc---eEEEecCCCCC--------Ccccch---------
Confidence 6778885 33 2333445667998876 4555666644 44433221000 000000
Q ss_pred ccCCCCCeEEEEccCCCCC-----cccccccCCCChHH----------HHHHHHHHHHHHHHHHhhhhcCCCCCcceEEE
Q 001557 247 GLGESSGAYIIRIPFGPKD-----KYVQKELLWPHIPE----------FVDAALTHIIQISKVLGEQVGSGQPIWPVAIH 311 (1054)
Q Consensus 247 ~~~~~~g~~i~rip~g~~~-----~~l~k~~l~~~l~~----------f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh 311 (1054)
.....++....++..+.+ ....++.+||.+.. ...........++..+.+.+.. -|+|-
T Consensus 55 -~~~~~~~~~~~v~L~~~~~~~yY~gfsn~~LWPlfHy~~~~~~~~~~~w~~Y~~VN~~FA~~v~~~~~~-----~D~VW 128 (474)
T PRK10117 55 -KVKKGNITWASFNLSEQDYDEYYNQFSNAVLWPAFHYRLDLVQFQRPAWEGYLRVNALLADKLLPLLKD-----DDIIW 128 (474)
T ss_pred -hhhcCCceEEEecCCHHHHHHHHhhhhhcchhhhhCCCCCccCcCHHHHHHHHHHHHHHHHHHHHhcCC-----CCEEE
Confidence 011124566666654321 12345667775432 2223333344455555554332 38999
Q ss_pred EcCCCchHHHHHHHcc-CCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHH
Q 001557 312 GHYADAGDAAALLSGA-LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIE 390 (1054)
Q Consensus 312 ~h~~~a~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~ 390 (1054)
.|++....++.++.+. ...++-|..|-.++..- -+. .....+.| -..+-.+|+|-+.|..+++
T Consensus 129 VHDYhL~llp~~LR~~~~~~~IgFFlHiPFPs~e-ifr------------~LP~r~ei---l~glL~aDlIGFqt~~y~r 192 (474)
T PRK10117 129 IHDYHLLPFASELRKRGVNNRIGFFLHIPFPTPE-IFN------------ALPPHDEL---LEQLCDYDLLGFQTENDRL 192 (474)
T ss_pred EeccHhhHHHHHHHHhCCCCcEEEEEeCCCCChH-HHh------------hCCChHHH---HHHHHhCccceeCCHHHHH
Confidence 9998777777777544 46789999998766431 110 00011111 2357789999999999888
Q ss_pred HHHhhhcCCChHHHHHHHHhHh--cccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhh
Q 001557 391 EQWRLYDGFDPVLERKLRARIK--RGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMH 468 (1054)
Q Consensus 391 ~~~~~y~~~~~~l~~~l~~r~~--~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (1054)
.+..... +.++.+.. ..+...|+.. ++.++|.|||++.|...... +.......++.
T Consensus 193 nFl~~~~-------~~lg~~~~~~~~v~~~gr~v-~v~~~PigID~~~~~~~a~~--------------~~~~~~~~lr~ 250 (474)
T PRK10117 193 AFLDCLS-------NLTRVTTRSGKSHTAWGKAF-RTEVYPIGIEPDEIAKQAAG--------------PLPPKLAQLKA 250 (474)
T ss_pred HHHHHHH-------HHcCCcccCCCeEEECCeEE-EEEEEECeEcHHHHHHHhhc--------------hHHHHHHHHHH
Confidence 7665322 22221111 1233446555 79999999999998742210 11122233333
Q ss_pred hcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEE-E-----ecCCCchhhhhchHHHHHHHHHHHHHc
Q 001557 469 FFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTLI-M-----GNRDDIDEMSGTNAALLLSILKLIDKY 540 (1054)
Q Consensus 469 ~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~--~l~LI-i-----G~~~~~~~~~~~~~~~~~~i~~l~~~~ 540 (1054)
.+ .++++|+.++|+|+.|||...++||+++++.+|.. +++|+ + ++.+.|.+++.+..+.+++||+..++.
T Consensus 251 ~~--~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~ 328 (474)
T PRK10117 251 EL--KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQL 328 (474)
T ss_pred Hc--CCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCC
Confidence 33 46889999999999999999999999998777765 45543 2 445677888889999999999999999
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHc------CCCEEEccccCcccceeeCCceEE
Q 001557 541 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAY------GLPIVATKNGGPVDIHRVLDNGLL 614 (1054)
Q Consensus 541 ~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~------G~PVIat~~Gg~~eiv~~~~~Gll 614 (1054)
+|.+..++...++++++.++|+.| ||++++|+.||||||.+||+|| |+.|++..+|+..++ ..+++
T Consensus 329 ~w~Pv~y~~~~~~~~~l~alyr~A----Dv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L----~~All 400 (474)
T PRK10117 329 GWTPLYYLNQHFDRKLLMKIFRYS----DVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL----TSALI 400 (474)
T ss_pred CceeEEEecCCCCHHHHHHHHHhc----cEEEecccccccccccchheeeecCCCCccEEEecccchHHHh----CCCeE
Confidence 999999999999999999999999 9999999999999999999999 678899999998888 46999
Q ss_pred eCCCCHHHHHHHHHHHHhCHHHHHH-HHHHHHHHHhcCCHHHHHHHHHHHHHHhhhc
Q 001557 615 VDPHDQQSIADALLKLVSDKQLWER-CRQNGLKNIHQFSWPEHCKSYLSRISSCKQR 670 (1054)
Q Consensus 615 v~p~d~~~la~aI~~ll~d~~~~~~-~~~~~~~~v~~fsw~~~a~~yl~~l~~~~~~ 670 (1054)
|||+|.+++|+||.++|++|...++ ..+..++.+..++...|++.|++.+..+...
T Consensus 401 VNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~~~ 457 (474)
T PRK10117 401 VNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPR 457 (474)
T ss_pred ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhc
Confidence 9999999999999999997665544 4455556669999999999999999877543
No 85
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.94 E-value=1.1e-26 Score=250.30 Aligned_cols=218 Identities=17% Similarity=0.157 Sum_probs=153.3
Q ss_pred EEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcCCCC
Q 001557 772 FVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSSS 848 (1054)
Q Consensus 772 iv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~~~~ 848 (1054)
|++|+|||| ++.+++.++++|+++++. |+.|+|||||++.++.++++.+++ ++++||+||+.|++.+..
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~----Gi~~~~aTGR~~~~~~~~~~~l~~----~~~~i~~nGa~i~~~~~~ 72 (225)
T TIGR01482 1 IASDIDGTLTDPNRAINESALEAIRKAESV----GIPVVLVTGNSVQFARALAKLIGT----PDPVIAENGGEISYNEGM 72 (225)
T ss_pred CeEeccCccCCCCcccCHHHHHHHHHHHHC----CCEEEEEcCCchHHHHHHHHHhCC----CCeEEEecCcEEEeCCCC
Confidence 589999999 356999999999999986 999999999999999999999987 468999999999975310
Q ss_pred CCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEecCCCCCccHHHHHH
Q 001557 849 TEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIPPVKELRK 928 (1054)
Q Consensus 849 ~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~~~~~~~~~el~~ 928 (1054)
...|...+...|....+.......... ..........+++.+. . ..+.+..
T Consensus 73 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~-~------~~~~~~~ 123 (225)
T TIGR01482 73 -----------DDIFLAYLEEEWFLDIVIAKTFPFSRL-----------KVQYPRRASLVKMRYG-I------DVDTVRE 123 (225)
T ss_pred -----------ceEEecccCHHHHHHHHHhcccchhhh-----------ccccccccceEEEeec-C------CHHHHHH
Confidence 112222232222221111100000000 0000011122333221 1 1123444
Q ss_pred HHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEecCcchhHH
Q 001557 929 LMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESAR 1008 (1054)
Q Consensus 929 ~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMgNa~~~~~ 1008 (1054)
.+...+..+.+. +.+. ++||+|+++|||.||++|++++|++++++++ +||+.| | ++||+.+|+||||+||. .+
T Consensus 124 ~~~~~~~~~~~~-~~~~-~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~-~GD~~N-D-i~m~~~ag~~vam~Na~--~~ 196 (225)
T TIGR01482 124 IIKELGLNLVAV-DSGF-DIHILPQGVNKGVAVKKLKEKLGIKPGETLV-CGDSEN-D-IDLFEVPGFGVAVANAQ--PE 196 (225)
T ss_pred HHHhcCceEEEe-cCCc-EEEEeeCCCCHHHHHHHHHHHhCCCHHHEEE-ECCCHh-h-HHHHHhcCceEEcCChh--HH
Confidence 444444444333 4454 8999999999999999999999999999998 889999 9 99999999999999998 45
Q ss_pred hhhhccCCCcccccccCCCceEEeccccCHHH----HHHHHHHhc
Q 001557 1009 KLHANRNYSLEDVISFDSHNVIQVDEACDSYD----IRASLEKLG 1049 (1054)
Q Consensus 1009 ~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~g----I~~al~~~~ 1049 (1054)
++..++ +||.+..++| |.++|++||
T Consensus 197 ~k~~A~----------------~vt~~~~~~G~~~~v~~~l~~~~ 225 (225)
T TIGR01482 197 LKEWAD----------------YVTESPYGEGGAEAIGEILQAIG 225 (225)
T ss_pred HHHhcC----------------eecCCCCCCcHHHHHHHHHHhhC
Confidence 555555 8999999999 999999987
No 86
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.94 E-value=2e-25 Score=258.76 Aligned_cols=273 Identities=24% Similarity=0.330 Sum_probs=209.5
Q ss_pred CcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEec
Q 001557 305 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 384 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~ 384 (1054)
..+|+|+++....... ..+......+.++++|+.......... ...+...++ + ....+..+|.|+++
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~~------~~~~~~~~~---~---~~~~~~~~d~ii~~ 164 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNNDPV------HSLINNFYE---Y---VFENLDKVDGVIVA 164 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCccccc------ccccchhhH---H---HHhChhhCCEEEEc
Confidence 4599999998644333 233444566788999974322211000 000111111 1 12246789999999
Q ss_pred CHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhH
Q 001557 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS 464 (1054)
Q Consensus 385 S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1054)
|+...+.+...++.. .++.+||+|++...+.+..
T Consensus 165 s~~~~~~l~~~~~~~-----------------------~~v~~ip~g~~~~~~~~~~----------------------- 198 (372)
T cd04949 165 TEQQKQDLQKQFGNY-----------------------NPIYTIPVGSIDPLKLPAQ----------------------- 198 (372)
T ss_pred cHHHHHHHHHHhCCC-----------------------CceEEEcccccChhhcccc-----------------------
Confidence 998877766555421 1589999999988765421
Q ss_pred HHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCC
Q 001557 465 EIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLY 543 (1054)
Q Consensus 465 ~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~ 543 (1054)
......+.|+++||+.+.||++.+++|+..+.... +++.| |+|.++. ...+..++.++++.
T Consensus 199 -----~~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~--~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~ 260 (372)
T cd04949 199 -----FKQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQV--PDATLDIYGYGDE-----------EEKLKELIEELGLE 260 (372)
T ss_pred -----hhhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhC--CCcEEEEEEeCch-----------HHHHHHHHHHcCCc
Confidence 00235678999999999999999999999996433 45554 6787764 23456667888888
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcccc-CcccceeeCCceEEeCCCCHHH
Q 001557 544 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNG-GPVDIHRVLDNGLLVDPHDQQS 622 (1054)
Q Consensus 544 ~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~G-g~~eiv~~~~~Gllv~p~d~~~ 622 (1054)
..|.|.|+ .+++..+|+.| |++|+||..||||++++|||+||+|||+++.| |+.+++.++.+|+++++.|+++
T Consensus 261 ~~v~~~g~--~~~~~~~~~~a----d~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~ 334 (372)
T cd04949 261 DYVFLKGY--TRDLDEVYQKA----QLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDIEA 334 (372)
T ss_pred ceEEEcCC--CCCHHHHHhhh----hEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcHHH
Confidence 99999995 67899999999 99999999999999999999999999999987 8999999999999999999999
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHH
Q 001557 623 IADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSY 660 (1054)
Q Consensus 623 la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~y 660 (1054)
++++|.+++++++.++++++++++.+++|||+.++++|
T Consensus 335 la~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 335 LAEAIIELLNDPKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 99999999999999999999999998899999998764
No 87
>PLN02887 hydrolase family protein
Probab=99.94 E-value=2.5e-26 Score=273.96 Aligned_cols=248 Identities=15% Similarity=0.118 Sum_probs=159.5
Q ss_pred CCEEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCc-------EEEEc
Q 001557 768 RKYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFD-------AFICN 837 (1054)
Q Consensus 768 ~kkLiv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d-------~lI~~ 837 (1054)
..|+|++|||||| ++.+++.++++|++++++ |+.|+|||||++.++.++++++++. .++ ++||+
T Consensus 307 ~iKLIa~DLDGTLLn~d~~Is~~t~eAI~kl~ek----Gi~~vIATGR~~~~i~~~l~~L~l~--~~~~~I~~~~p~I~~ 380 (580)
T PLN02887 307 KFSYIFCDMDGTLLNSKSQISETNAKALKEALSR----GVKVVIATGKARPAVIDILKMVDLA--GKDGIISESSPGVFL 380 (580)
T ss_pred CccEEEEeCCCCCCCCCCccCHHHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHhCcc--cccceEeecccEEee
Confidence 4699999999999 467999999999999997 9999999999999999999999873 233 35677
Q ss_pred CCcEEEcCCCCC--CCCCC-------CccccCccc--hhhhccccC---hhhHHHHHHHhhhhccCCCCccCcccccccc
Q 001557 838 SGSELYYPSSST--EDNHG-------LPFLVDLDY--RFHTEYRWG---GEGLRKTLVRWAASVNDKKGEEGKIVEEDES 903 (1054)
Q Consensus 838 nGa~I~~~~~~~--~~~~~-------~~~~~d~~~--~~~i~~~w~---~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~ 903 (1054)
||+.||...+.. ..... +.+...... .......|. .+......... ...........+.+...
T Consensus 381 NGA~I~d~~g~~I~~~~L~~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~---~~~~~~~~i~~l~~~~~ 457 (580)
T PLN02887 381 QGLLVYGRQGREIYRSNLDQEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTI---YHEPKAEIMSSVDQLLA 457 (580)
T ss_pred cCeEEEECCCcEEEEEeCCHHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHh---hccccccccCCHHHhhc
Confidence 999998533211 00000 000000000 000000000 00000000000 00000000000000000
Q ss_pred cCcceEEEEEecCCCCCccHHHHHHHHHHh-cCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcC
Q 001557 904 RSTIHCYAFEVTNPQMIPPVKELRKLMRIQ-ALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGEC 982 (1054)
Q Consensus 904 ~~~~~kis~~~~~~~~~~~~~el~~~l~~~-~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~ 982 (1054)
.....|+.+.. .++ ....++.+.+... ...+.++.+.++ ++||+|+++|||.||++|++++||+++++|| |||+
T Consensus 458 ~~~i~Ki~~~~-~~e--~~~~~l~~~l~~~~~~~~~v~~S~~~-~lEI~p~gvSKG~ALk~L~e~lGI~~eeviA-FGDs 532 (580)
T PLN02887 458 AADIQKVIFLD-TAE--GVSSVLRPYWSEATGDRANVVQAQPD-MLEIVPPGTSKGNGVKMLLNHLGVSPDEIMA-IGDG 532 (580)
T ss_pred ccCeeEEEEEc-ChH--HHHHHHHHHHHHHhcCcEEEEEecCc-EEEEecCCCCHHHHHHHHHHHcCCCHHHEEE-Eecc
Confidence 11234554432 221 1123344444332 346788888876 9999999999999999999999999999999 8888
Q ss_pred CCccccccccCcceEEEecCcchhHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHHHHhc
Q 001557 983 GDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLG 1049 (1054)
Q Consensus 983 ~d~D~~eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al~~~~ 1049 (1054)
.| | ++||+.+|+|||||||. .+++..++ +||.++++|||+++|++|-
T Consensus 533 ~N-D-IeMLe~AG~gVAMgNA~--eeVK~~Ad----------------~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 533 EN-D-IEMLQLASLGVALSNGA--EKTKAVAD----------------VIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred hh-h-HHHHHHCCCEEEeCCCC--HHHHHhCC----------------EEeCCCCcCHHHHHHHHhh
Confidence 88 8 99999999999999999 45555555 8999999999999999873
No 88
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.94 E-value=2.2e-26 Score=248.97 Aligned_cols=225 Identities=16% Similarity=0.114 Sum_probs=156.4
Q ss_pred CEEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcC
Q 001557 769 KYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 845 (1054)
Q Consensus 769 kkLiv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~ 845 (1054)
.|+|++|+|||| ++.+++.++++|+++++. |+.|+|||||++..+.++++.++++ +++||+||+.|+..
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~i~~nGa~i~~~ 74 (230)
T PRK01158 3 IKAIAIDIDGTITDKDRRLSLKAVEAIRKAEKL----GIPVILATGNVLCFARAAAKLIGTS----GPVIAENGGVISVG 74 (230)
T ss_pred eeEEEEecCCCcCCCCCccCHHHHHHHHHHHHC----CCEEEEEcCCchHHHHHHHHHhCCC----CcEEEecCeEEEEc
Confidence 489999999999 466999999999999986 9999999999999999999999983 57999999999975
Q ss_pred CCCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEecCCCCCccHHH
Q 001557 846 SSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIPPVKE 925 (1054)
Q Consensus 846 ~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~~~~~~~~~e 925 (1054)
... ... +...+. .....+..+........ ..+..........++.+ .. . ...++
T Consensus 75 ~~~-------~~~----~~~~~~------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~-~---~~~~~ 128 (230)
T PRK01158 75 FDG-------KRI----FLGDIE------ECEKAYSELKKRFPEAS----TSLTKLDPDYRKTEVAL-RR-T---VPVEE 128 (230)
T ss_pred CCC-------CEE----EEcchH------HHHHHHHHHHHhccccc----eeeecCCcccccceeee-cc-c---ccHHH
Confidence 210 111 111111 11111211111110000 00000000000111211 11 1 12345
Q ss_pred HHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEecCcch
Q 001557 926 LRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGE 1005 (1054)
Q Consensus 926 l~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMgNa~~ 1005 (1054)
+.+.+...+..+.++.+ +. ++||+|+++|||.|+++|++++|++++++++ +||+.| | ++||+.+|+||||+||.
T Consensus 129 ~~~~l~~~~~~~~~~~~-~~-~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~-~GD~~N-D-i~m~~~ag~~vam~Na~- 202 (230)
T PRK01158 129 VRELLEELGLDLEIVDS-GF-AIHIKSPGVNKGTGLKKLAELMGIDPEEVAA-IGDSEN-D-LEMFEVAGFGVAVANAD- 202 (230)
T ss_pred HHHHHHHcCCcEEEEec-ce-EEEEeeCCCChHHHHHHHHHHhCCCHHHEEE-ECCchh-h-HHHHHhcCceEEecCcc-
Confidence 66666654444555554 33 7999999999999999999999999999999 899999 9 99999999999999999
Q ss_pred hHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHHHHhcc
Q 001557 1006 SARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGV 1050 (1054)
Q Consensus 1006 ~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al~~~~~ 1050 (1054)
.+++..+ .++|.+++++||+++|++|.+
T Consensus 203 -~~vk~~a----------------~~v~~~n~~~Gv~~~l~~~~~ 230 (230)
T PRK01158 203 -EELKEAA----------------DYVTEKSYGEGVAEAIEHLLL 230 (230)
T ss_pred -HHHHHhc----------------ceEecCCCcChHHHHHHHHhC
Confidence 4444444 489999999999999999864
No 89
>PHA01633 putative glycosyl transferase group 1
Probab=99.94 E-value=3e-24 Score=241.35 Aligned_cols=222 Identities=14% Similarity=0.176 Sum_probs=163.6
Q ss_pred hccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCC
Q 001557 375 LDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGS 454 (1054)
Q Consensus 375 l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~ 454 (1054)
+...+.+|++|+...+.+.+. |+. . .+ +||+|+|++.|.|....
T Consensus 90 m~~~~~vIavS~~t~~~L~~~------------------G~~-----~-~i-~I~~GVD~~~f~p~~~~----------- 133 (335)
T PHA01633 90 LLQDVKFIPNSKFSAENLQEV------------------GLQ-----V-DL-PVFHGINFKIVENAEKL----------- 133 (335)
T ss_pred HhcCCEEEeCCHHHHHHHHHh------------------CCC-----C-ce-eeeCCCChhhcCccchh-----------
Confidence 444668899999877765432 111 1 33 47899999988753210
Q ss_pred CCCCCCchhHHHhhhcC-CCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEEEecCCCchhhhhchHHHHH
Q 001557 455 PASPDPPIWSEIMHFFS-NPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTLIMGNRDDIDEMSGTNAALLL 531 (1054)
Q Consensus 455 ~~~~~~~~~~~~~~~~~-~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~--~l~LIiG~~~~~~~~~~~~~~~~~ 531 (1054)
.+ +.+.++.. .++.++|+++||+.+.||++.+++|+..+.+..+.. ++.+++.+.
T Consensus 134 ----~~---~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~--------------- 191 (335)
T PHA01633 134 ----VP---QLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH--------------- 191 (335)
T ss_pred ----hH---HHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH---------------
Confidence 01 11112221 146788999999999999999999999986544432 355533321
Q ss_pred HHHHHHHHcCCCCCEEeC---CCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceee
Q 001557 532 SILKLIDKYDLYGQVAYP---KHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV 608 (1054)
Q Consensus 532 ~i~~l~~~~~l~~~V~~~---g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~ 608 (1054)
....++++.++|.|. |+.+.+++.++|+.| |+||+||..||||++++||||||+|||+++.||.+|++..
T Consensus 192 ---~~~~~l~l~~~V~f~g~~G~~~~~dl~~~y~~a----DifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~ 264 (335)
T PHA01633 192 ---KQFTQLEVPANVHFVAEFGHNSREYIFAFYGAM----DFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSW 264 (335)
T ss_pred ---HHHHHcCCCCcEEEEecCCCCCHHHHHHHHHhC----CEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCC
Confidence 113456677889998 555778999999999 9999999999999999999999999999999999886431
Q ss_pred ------------------CCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 001557 609 ------------------LDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLS 662 (1054)
Q Consensus 609 ------------------~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~ 662 (1054)
...|+++++.|+++|+++|.+++...+ ...+++++++.++.|+|+..+++|++
T Consensus 265 ~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~-~~~~~~~~~~~a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 265 QWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD-REERSMKLKELAKKYDIRNLYTRFLE 335 (335)
T ss_pred ccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC-hhhhhHHHHHHHHhcCHHHHHHHhhC
Confidence 234778999999999999999976432 23347788888899999999999863
No 90
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.93 E-value=1.8e-25 Score=243.77 Aligned_cols=224 Identities=17% Similarity=0.224 Sum_probs=156.3
Q ss_pred EEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcCCCC
Q 001557 772 FVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSSS 848 (1054)
Q Consensus 772 iv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~~~~ 848 (1054)
||+|+|||| ...+++.++++|+.++++ |+.|+|||||++..+.++++++++. +++||+||+.|+...+.
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~----g~~~~i~TGR~~~~~~~~~~~~~~~----~~~I~~nGa~i~~~~~~ 72 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGKISPETIEALKELQEK----GIKLVIATGRSYSSIKRLLKELGID----DYFICSNGALIDDPKGK 72 (254)
T ss_dssp EEEECCTTTCSTTSSSCHHHHHHHHHHHHT----TCEEEEECSSTHHHHHHHHHHTTHC----SEEEEGGGTEEEETTTE
T ss_pred cEEEECCceecCCCeeCHHHHHHHHhhccc----ceEEEEEccCcccccccccccccch----hhhcccccceeeecccc
Confidence 689999999 467999999999999997 9999999999999999999999983 68999999999443211
Q ss_pred CCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhccC-----------CCC--------------ccCcc-ccccc
Q 001557 849 TEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVND-----------KKG--------------EEGKI-VEEDE 902 (1054)
Q Consensus 849 ~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~-----------~~~--------------~~~~~-v~~~~ 902 (1054)
.+ .......+.+..++......... ... ..... .....
T Consensus 73 --------~l--------~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (254)
T PF08282_consen 73 --------IL--------YEKPIDSDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDL 136 (254)
T ss_dssp --------EE--------EEESB-HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHH
T ss_pred --------cc--------hhhheeccchhheeehhhhcccccccccceeeecccccccchhhhhhccccccccccccccc
Confidence 11 00011111111111111000000 000 00000 00011
Q ss_pred ccCcceEEEEEecCCCCCccHHHHHHHHHHhc-CeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCc
Q 001557 903 SRSTIHCYAFEVTNPQMIPPVKELRKLMRIQA-LRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGE 981 (1054)
Q Consensus 903 ~~~~~~kis~~~~~~~~~~~~~el~~~l~~~~-~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD 981 (1054)
......++.+. .++ ..+..+.+.+.... ..+.++.+.+. ++||+|+++|||.||++|++++|++++++++ +||
T Consensus 137 ~~~~i~ki~~~-~~~---~~~~~l~~~l~~~~~~~~~~~~~~~~-~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~-~GD 210 (254)
T PF08282_consen 137 EDEEIFKILFF-PDP---EDLEQLREELKKKFPNLIDVVRSSPY-FLEITPKGVSKGSAIKYLLEYLGISPEDIIA-FGD 210 (254)
T ss_dssp HCSSESEEEEE-SCH---HHHHHHHHHHHHHHTTTEEEEEEETT-EEEEEETTSSHHHHHHHHHHHHTTSGGGEEE-EES
T ss_pred ccccceeeecc-ccc---hhhhhhhhhhccccCcceeEEEeccc-ceEEeeCCCCHHHHHHHHhhhcccccceeEE-eec
Confidence 22345677744 222 24556666666543 33577778876 9999999999999999999999999999999 788
Q ss_pred CCCccccccccCcceEEEecCcchhHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHH
Q 001557 982 CGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASL 1045 (1054)
Q Consensus 982 ~~d~D~~eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al 1045 (1054)
+.| | ++||+.+|.||||+||. .+++..++ +++..+..+||+++|
T Consensus 211 ~~N-D-~~Ml~~~~~~~am~na~--~~~k~~a~----------------~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 211 SEN-D-IEMLELAGYSVAMGNAT--PELKKAAD----------------YITPSNNDDGVAKAI 254 (254)
T ss_dssp SGG-G-HHHHHHSSEEEEETTS---HHHHHHSS----------------EEESSGTCTHHHHHH
T ss_pred ccc-c-HhHHhhcCeEEEEcCCC--HHHHHhCC----------------EEecCCCCChHHHhC
Confidence 888 8 99999999999999999 55555555 788999999999986
No 91
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.93 E-value=3.4e-25 Score=245.89 Aligned_cols=246 Identities=15% Similarity=0.142 Sum_probs=154.0
Q ss_pred CEEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcC
Q 001557 769 KYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 845 (1054)
Q Consensus 769 kkLiv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~ 845 (1054)
.|+|++|+|||| ++.+++.++++|++++++ |+.|+|||||++..+.++++++++. .++||+||+.|+..
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~~~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~d~ 74 (272)
T PRK10530 3 YRVIALDLDGTLLTPKKTILPESLEALARAREA----GYKVIIVTGRHHVAIHPFYQALALD----TPAICCNGTYLYDY 74 (272)
T ss_pred ccEEEEeCCCceECCCCccCHHHHHHHHHHHHC----CCEEEEEcCCChHHHHHHHHhcCCC----CCEEEcCCcEEEec
Confidence 489999999999 467999999999999997 9999999999999999999999984 36999999999963
Q ss_pred CCCC---CCCCC-------CccccCccchhh--hcccc-Chh---hHHHHHHHhhhhccCCCCccCccc---ccc-cccC
Q 001557 846 SSST---EDNHG-------LPFLVDLDYRFH--TEYRW-GGE---GLRKTLVRWAASVNDKKGEEGKIV---EED-ESRS 905 (1054)
Q Consensus 846 ~~~~---~~~~~-------~~~~~d~~~~~~--i~~~w-~~e---~l~~~~~~~~~~~~~~~~~~~~~v---~~~-~~~~ 905 (1054)
.... ..... +.+......... ....| ... ...... .+..............+ .+. ....
T Consensus 75 ~~~~~l~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (272)
T PRK10530 75 QAKKVLEADPLPVQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTL-NWAQTLPPEQRPTFTQVDSLAQAARQVN 153 (272)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHh-hhhhccchhcccceEEcccHHHHHhhcC
Confidence 2111 00000 000000000000 00000 000 000000 00000000000000000 000 0011
Q ss_pred cceEEEEEecCCCCCccHHHHHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCc
Q 001557 906 TIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDT 985 (1054)
Q Consensus 906 ~~~kis~~~~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~ 985 (1054)
...++... .++ ....+++.+.+... ..+.+..+... ++||+|.++|||.||+++++++|++++++++ +||+.|
T Consensus 154 ~~~~i~~~--~~~-~~~~~~~~~~~~~~-~~~~~~~s~~~-~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~-~GD~~N- 226 (272)
T PRK10530 154 AIWKFALT--HED-LPQLQHFAKHVEHE-LGLECEWSWHD-QVDIARKGNSKGKRLTQWVEAQGWSMKNVVA-FGDNFN- 226 (272)
T ss_pred CcEEEEEe--cCC-HHHHHHHHHHHhhh-cCceEEEecCc-eEEEecCCCChHHHHHHHHHHcCCCHHHeEE-eCCChh-
Confidence 12333222 111 11233444444332 22445555554 8999999999999999999999999999999 899999
Q ss_pred cccccccCcceEEEecCcchhHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHHHHhc
Q 001557 986 DYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLG 1049 (1054)
Q Consensus 986 D~~eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al~~~~ 1049 (1054)
| ++||+.+|+|||||||. .+++..++ +++.++++|||+++|+++-
T Consensus 227 D-i~m~~~ag~~vamgna~--~~lk~~Ad----------------~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 227 D-ISMLEAAGLGVAMGNAD--DAVKARAD----------------LVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred h-HHHHHhcCceEEecCch--HHHHHhCC----------------EEEecCCCCcHHHHHHHHh
Confidence 9 99999999999999987 44444444 8889999999999999873
No 92
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.93 E-value=7.7e-24 Score=244.42 Aligned_cols=344 Identities=19% Similarity=0.157 Sum_probs=238.1
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccc
Q 001557 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 245 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~ 245 (1054)
|||++++. |. ||......+|+++|.++ | |+|++++.... + ..+
T Consensus 2 ~~i~i~~~-g~--------------gG~~~~~~~la~~L~~~-g-~ev~vv~~~~~-~--------~~~----------- 44 (357)
T PRK00726 2 KKILLAGG-GT--------------GGHVFPALALAEELKKR-G-WEVLYLGTARG-M--------EAR----------- 44 (357)
T ss_pred cEEEEEcC-cc--------------hHhhhHHHHHHHHHHhC-C-CEEEEEECCCc-h--------hhh-----------
Confidence 88888874 33 89999999999999999 8 99999986421 0 000
Q ss_pred cccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHH
Q 001557 246 QGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLS 325 (1054)
Q Consensus 246 ~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~ 325 (1054)
.....|+.+++++..... ....+..+..+ ...+..+..+.+.+.+ .+|||||+|.+..+..+..++
T Consensus 45 --~~~~~g~~~~~~~~~~~~----~~~~~~~l~~~-~~~~~~~~~~~~~ik~-------~~pDvv~~~~~~~~~~~~~~~ 110 (357)
T PRK00726 45 --LVPKAGIEFHFIPSGGLR----RKGSLANLKAP-FKLLKGVLQARKILKR-------FKPDVVVGFGGYVSGPGGLAA 110 (357)
T ss_pred --ccccCCCcEEEEeccCcC----CCChHHHHHHH-HHHHHHHHHHHHHHHh-------cCCCEEEECCCcchhHHHHHH
Confidence 011148888888764321 00111111111 1112222223333322 569999999876666677777
Q ss_pred ccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHH
Q 001557 326 GALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1054)
Q Consensus 326 ~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~ 405 (1054)
+..++|+|++.|+..... . +++.+..+|.++++++... .. .
T Consensus 111 ~~~~~p~v~~~~~~~~~~---------------------~-----~r~~~~~~d~ii~~~~~~~---~~----~------ 151 (357)
T PRK00726 111 RLLGIPLVIHEQNAVPGL---------------------A-----NKLLARFAKKVATAFPGAF---PE----F------ 151 (357)
T ss_pred HHcCCCEEEEcCCCCccH---------------------H-----HHHHHHHhchheECchhhh---hc----c------
Confidence 788999999888642211 1 2234667899999887432 11 1
Q ss_pred HHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCC
Q 001557 406 KLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPD 485 (1054)
Q Consensus 406 ~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld 485 (1054)
+..++.++|||+|.+.+.+... ..++...++.++|+++|+..
T Consensus 152 ---------------~~~~i~vi~n~v~~~~~~~~~~-----------------------~~~~~~~~~~~~i~~~gg~~ 193 (357)
T PRK00726 152 ---------------FKPKAVVTGNPVREEILALAAP-----------------------PARLAGREGKPTLLVVGGSQ 193 (357)
T ss_pred ---------------CCCCEEEECCCCChHhhcccch-----------------------hhhccCCCCCeEEEEECCcH
Confidence 1128999999999876543110 01122235678899999998
Q ss_pred CCCCHHHHH-HHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHh
Q 001557 486 PKKNITTLV-KAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLA 564 (1054)
Q Consensus 486 ~~Kgi~~ll-~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A 564 (1054)
..|++..++ +|+.++.. .+...+++|+++. ..+.+..+ +++. |.+.|++ ++++.+|..|
T Consensus 194 ~~~~~~~~l~~a~~~~~~---~~~~~~~~G~g~~------------~~~~~~~~-~~~~--v~~~g~~--~~~~~~~~~~ 253 (357)
T PRK00726 194 GARVLNEAVPEALALLPE---ALQVIHQTGKGDL------------EEVRAAYA-AGIN--AEVVPFI--DDMAAAYAAA 253 (357)
T ss_pred hHHHHHHHHHHHHHHhhh---CcEEEEEcCCCcH------------HHHHHHhh-cCCc--EEEeehH--hhHHHHHHhC
Confidence 888876666 99988843 1333346788752 33444444 6653 8999996 7899999999
Q ss_pred hcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCc--------ccceeeCCceEEeCCCC--HHHHHHHHHHHHhCH
Q 001557 565 AKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGP--------VDIHRVLDNGLLVDPHD--QQSIADALLKLVSDK 634 (1054)
Q Consensus 565 a~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~--------~eiv~~~~~Gllv~p~d--~~~la~aI~~ll~d~ 634 (1054)
|++|.++- +.+++|||+||+|+|++..++. .+.+.+.++|+++++.| +++++++|.++++|+
T Consensus 254 ----d~~i~~~g----~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~ 325 (357)
T PRK00726 254 ----DLVICRAG----ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDP 325 (357)
T ss_pred ----CEEEECCC----HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCH
Confidence 99998762 6899999999999999986531 25566778899999888 999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 001557 635 QLWERCRQNGLKNIHQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 635 ~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~ 665 (1054)
+.+++|++++++..+.++....++.+++.+.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 326 ERLEAMAEAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred HHHHHHHHHHHhcCCcCHHHHHHHHHHHHhh
Confidence 9999999999998889999999999888764
No 93
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.93 E-value=6.3e-25 Score=241.55 Aligned_cols=233 Identities=18% Similarity=0.078 Sum_probs=156.1
Q ss_pred EEEEEecCCC--C-hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcCCC
Q 001557 771 VFVIAADCDT--T-SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSS 847 (1054)
Q Consensus 771 Liv~DiDGTL--~-~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~~~ 847 (1054)
||++|+|||| . +...+.++++|++++++ |+.|+|||||++..+.+++++++++ +++||+||+.|+..+.
T Consensus 1 li~~DlDGTll~~~~~~~~~~~~~i~~l~~~----g~~~~~~TgR~~~~~~~~~~~~~~~----~~~I~~NGa~i~~~~~ 72 (256)
T TIGR01486 1 WIFTDLDGTLLDPHGYDWGPAKEVLERLQEL----GIPVIPCTSKTAAEVEYLRKELGLE----DPFIVENGGAIYGPRG 72 (256)
T ss_pred CEEEcCCCCCcCCCCcCchHHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCCC----CcEEEcCCeEEEeCCC
Confidence 5899999999 2 32455799999999987 9999999999999999999999983 6899999999998642
Q ss_pred CCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhc-cCCCCccC------------cc-cccccccCcceEEEEE
Q 001557 848 STEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASV-NDKKGEEG------------KI-VEEDESRSTIHCYAFE 913 (1054)
Q Consensus 848 ~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~-~~~~~~~~------------~~-v~~~~~~~~~~kis~~ 913 (1054)
.. ..+..| .+...|..+.+.+++..+.... ........ .. ...........++ +.
T Consensus 73 ~~--------~~~~~~--~~~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 141 (256)
T TIGR01486 73 WF--------TEPEYP--VIALGIPYEKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSET-IL 141 (256)
T ss_pred cc--------cCCCeE--EEEcCCCHHHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCc-ee
Confidence 10 001011 1333455555544443321100 00000000 00 0000000011222 22
Q ss_pred ecCCCCCccHHHHHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCC--ccCEEEEeCcCCCccccccc
Q 001557 914 VTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGID--LSNVVVIAGECGDTDYEGLL 991 (1054)
Q Consensus 914 ~~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~--~e~vvaf~GD~~d~D~~eML 991 (1054)
. ++ ..+..+.+.+... .+.+..+. . ++||+|+++|||.||++|++++|++ .+++++ +||+.| | ++||
T Consensus 142 ~-~~---~~~~~~~~~~~~~--~~~~~~s~-~-~~ei~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a-~GD~~N-D-~~Ml 210 (256)
T TIGR01486 142 W-SE---ERRERFTEALVEL--GLEVTHGN-R-FYHVLGAGSDKGKAANALKQFYNQPGGAIKVVG-LGDSPN-D-LPLL 210 (256)
T ss_pred c-Ch---HHHHHHHHHHHHc--CCEEEeCC-c-eEEEecCCCCHHHHHHHHHHHHhhcCCCceEEE-EcCCHh-h-HHHH
Confidence 2 22 2345666666543 34555543 3 8999999999999999999999999 999999 888999 9 9999
Q ss_pred cCcceEEEecCcchhHHhhhhccCCCcccccccCCCc---eEEeccccCHHHHHHHHHHh
Q 001557 992 GGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHN---VIQVDEACDSYDIRASLEKL 1048 (1054)
Q Consensus 992 ~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~t~~~~~~gI~~al~~~ 1048 (1054)
+.+|+||||+||... .+..+.. ..++|.+.++|||+++|+||
T Consensus 211 ~~ag~~vam~Na~~~---------------~~~lk~~~~a~~~vt~~~~~dGva~~l~~~ 255 (256)
T TIGR01486 211 EVVDLAVVVPGPNGP---------------NVSLKPGDPGSFLLTPAPGPEGWREALEHL 255 (256)
T ss_pred HHCCEEEEeCCCCCC---------------ccccCccCCCcEEEcCCCCcHHHHHHHHHh
Confidence 999999999999711 1133433 24899999999999999986
No 94
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.92 E-value=2.5e-24 Score=236.82 Aligned_cols=221 Identities=16% Similarity=0.144 Sum_probs=152.2
Q ss_pred EEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcCCC
Q 001557 771 VFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSS 847 (1054)
Q Consensus 771 Liv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~~~ 847 (1054)
||++|+|||| ++.+++.++++|++++++ |+.|+|||||++..+.++++++++. .++||+||+.|++.++
T Consensus 1 li~~DlDGTLl~~~~~i~~~~~~~i~~l~~~----G~~~~iaTGR~~~~~~~~~~~~~~~----~~~I~~NGa~i~~~~~ 72 (256)
T TIGR00099 1 LIFIDLDGTLLNDDHTISPSTKEALAKLREK----GIKVVLATGRPYKEVKNILKELGLD----TPFITANGAAVIDDQG 72 (256)
T ss_pred CEEEeCCCCCCCCCCccCHHHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHcCCC----CCEEEcCCcEEECCCC
Confidence 5899999999 467999999999999997 9999999999999999999999883 3799999999997632
Q ss_pred CCCCCCCCccccCccchhhhccccChhhHHHHHHHhh----------------------------hhccCCCCccCcccc
Q 001557 848 STEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWA----------------------------ASVNDKKGEEGKIVE 899 (1054)
Q Consensus 848 ~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~----------------------------~~~~~~~~~~~~~v~ 899 (1054)
.. + .......+.+.+++..+. ....... ..+.
T Consensus 73 ~~--------i--------~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 132 (256)
T TIGR00099 73 EI--------L--------YKKPLDLDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPK----LEVV 132 (256)
T ss_pred CE--------E--------eecCCCHHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCc----ceec
Confidence 11 0 000011111111111000 0000000 0000
Q ss_pred c--ccccCcceEEEEEecCCCCCccHHHHHHHHHH--hcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCE
Q 001557 900 E--DESRSTIHCYAFEVTNPQMIPPVKELRKLMRI--QALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNV 975 (1054)
Q Consensus 900 ~--~~~~~~~~kis~~~~~~~~~~~~~el~~~l~~--~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~v 975 (1054)
. ........++.+. .++ ..++++.+.+.. ....+.++.+.+. ++||+|+++|||.||+++++++|++++++
T Consensus 133 ~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~s~~~-~leI~~~~~~K~~~i~~~~~~~~~~~~~~ 207 (256)
T TIGR00099 133 DIQYLPDDILKILLLF-LDP---EDLDLLIEALNKLELEENVSVVSSGPY-SIEITAKGVSKGSALQSLAEALGISLEDV 207 (256)
T ss_pred cchhhhcccceEEEEE-CCH---HHHHHHHHHhhhhhhcCCEEEEEecCc-eEEecCCCCChHHHHHHHHHHcCCCHHHE
Confidence 0 0001112223222 222 234555555542 2345777788775 99999999999999999999999999999
Q ss_pred EEEeCcCCCccccccccCcceEEEecCcchhHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHH
Q 001557 976 VVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASL 1045 (1054)
Q Consensus 976 vaf~GD~~d~D~~eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al 1045 (1054)
++ +||+.| | ++||+.+|.+|||+||. ..++..++ +++.+++++||+++|
T Consensus 208 ~~-~GD~~n-D-~~m~~~~~~~~a~~na~--~~~k~~a~----------------~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 208 IA-FGDGMN-D-IEMLEAAGYGVAMGNAD--EELKALAD----------------YVTDSNNEDGVALAL 256 (256)
T ss_pred EE-eCCcHH-h-HHHHHhCCceeEecCch--HHHHHhCC----------------EEecCCCCcchhhhC
Confidence 99 888888 8 99999999999999988 44444444 788899999999875
No 95
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.92 E-value=6.3e-23 Score=235.78 Aligned_cols=330 Identities=18% Similarity=0.187 Sum_probs=225.6
Q ss_pred CCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCcccc
Q 001557 190 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQ 269 (1054)
Q Consensus 190 tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~ 269 (1054)
+||..+++.+|+++|.+. | |+|+++|.... .... .....|++++++++....
T Consensus 9 ~gG~~~~~~~la~~l~~~-G-~ev~v~~~~~~---------~~~~-------------~~~~~~~~~~~~~~~~~~---- 60 (350)
T cd03785 9 TGGHIFPALALAEELRER-G-AEVLFLGTKRG---------LEAR-------------LVPKAGIPLHTIPVGGLR---- 60 (350)
T ss_pred chhhhhHHHHHHHHHHhC-C-CEEEEEECCCc---------chhh-------------cccccCCceEEEEecCcC----
Confidence 489999999999999999 8 99999987421 0000 011237788888864321
Q ss_pred cccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHH
Q 001557 270 KELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLK 349 (1054)
Q Consensus 270 k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~ 349 (1054)
+...+..+..+.. ++..+..+.+.+.+ .+||+||+|...++..+..+++..++|++++.|+....
T Consensus 61 ~~~~~~~~~~~~~-~~~~~~~~~~~i~~-------~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~~------- 125 (350)
T cd03785 61 RKGSLKKLKAPFK-LLKGVLQARKILKK-------FKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVPG------- 125 (350)
T ss_pred CCChHHHHHHHHH-HHHHHHHHHHHHHh-------cCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCcc-------
Confidence 1111111111111 12222222233322 56999999987666767777888899999877754221
Q ss_pred hCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeC
Q 001557 350 QGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIP 429 (1054)
Q Consensus 350 ~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIP 429 (1054)
.. +++.++.+|.|+++|+...+. + .+ .++.+||
T Consensus 126 --------------~~-----~~~~~~~~~~vi~~s~~~~~~----~---~~---------------------~~~~~i~ 158 (350)
T cd03785 126 --------------LA-----NRLLARFADRVALSFPETAKY----F---PK---------------------DKAVVTG 158 (350)
T ss_pred --------------HH-----HHHHHHhhCEEEEcchhhhhc----C---CC---------------------CcEEEEC
Confidence 01 122456799999999866543 1 11 2899999
Q ss_pred CCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCCc
Q 001557 430 PGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITT-LVKAFGECRPLRELAN 508 (1054)
Q Consensus 430 nGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~~~~~~~ 508 (1054)
||+|.+.+.+... ..++..++++++|+++|+....|+... +++|+..+. .+...
T Consensus 159 n~v~~~~~~~~~~-----------------------~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~--~~~~~ 213 (350)
T cd03785 159 NPVREEILALDRE-----------------------RARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELL--RKRLQ 213 (350)
T ss_pred CCCchHHhhhhhh-----------------------HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhh--ccCeE
Confidence 9999876653210 122333567788888888777777765 458888874 22233
Q ss_pred EEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHH
Q 001557 509 LTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAA 588 (1054)
Q Consensus 509 l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAm 588 (1054)
+.+++|.++ ...+.+.+.++ .++|.+.|++ +++..+|+.| |++|.++- +.+++|||
T Consensus 214 ~~~i~G~g~------------~~~l~~~~~~~--~~~v~~~g~~--~~~~~~l~~a----d~~v~~sg----~~t~~Eam 269 (350)
T cd03785 214 VIHQTGKGD------------LEEVKKAYEEL--GVNYEVFPFI--DDMAAAYAAA----DLVISRAG----ASTVAELA 269 (350)
T ss_pred EEEEcCCcc------------HHHHHHHHhcc--CCCeEEeehh--hhHHHHHHhc----CEEEECCC----HhHHHHHH
Confidence 334667762 23444555554 4679999986 7999999999 99998762 68999999
Q ss_pred HcCCCEEEccccC--------cccceeeCCceEEeCCC--CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHH
Q 001557 589 AYGLPIVATKNGG--------PVDIHRVLDNGLLVDPH--DQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCK 658 (1054)
Q Consensus 589 A~G~PVIat~~Gg--------~~eiv~~~~~Gllv~p~--d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~ 658 (1054)
++|+|||+++.++ ..+.+.+..+|+++++. |+++++++|..++.+++.++++++++++.++.+.-+++++
T Consensus 270 ~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~ 349 (350)
T cd03785 270 ALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDPERLKAMAEAARSLARPDAAERIAD 349 (350)
T ss_pred HhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHh
Confidence 9999999987654 23556667899999987 8999999999999999999999999998888777776654
No 96
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.91 E-value=5.8e-23 Score=235.88 Aligned_cols=326 Identities=19% Similarity=0.191 Sum_probs=216.2
Q ss_pred CcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCccccc
Q 001557 191 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQK 270 (1054)
Q Consensus 191 GG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~k 270 (1054)
||......+|+++|.++ | |+|+++|+.. +...+ .....|+.+++++..+.. .
T Consensus 11 ~g~~~~~~~La~~L~~~-g-~eV~vv~~~~---------~~~~~-------------~~~~~g~~~~~i~~~~~~----~ 62 (348)
T TIGR01133 11 GGHIFPALAVAEELIKR-G-VEVLWLGTKR---------GLEKR-------------LVPKAGIEFYFIPVGGLR----R 62 (348)
T ss_pred HHHHhHHHHHHHHHHhC-C-CEEEEEeCCC---------cchhc-------------ccccCCCceEEEeccCcC----C
Confidence 66666667999999999 8 9999998521 00000 011247888888865421 0
Q ss_pred ccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHh
Q 001557 271 ELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQ 350 (1054)
Q Consensus 271 ~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~ 350 (1054)
..+...+..+ ...+..+.++.+.+.+ .+||+||+|.......+..+++..++|+|++.|+....
T Consensus 63 ~~~~~~l~~~-~~~~~~~~~l~~~i~~-------~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~~-------- 126 (348)
T TIGR01133 63 KGSFRLIKTP-LKLLKAVFQARRILKK-------FKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVPG-------- 126 (348)
T ss_pred CChHHHHHHH-HHHHHHHHHHHHHHHh-------cCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCcc--------
Confidence 0110011100 1112222233333332 67999999987666666667777899998655532110
Q ss_pred CCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCC
Q 001557 351 GRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPP 430 (1054)
Q Consensus 351 g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPn 430 (1054)
. .+++..+.+|.+++.|+...+.+ +..+|||
T Consensus 127 -------------~-----~~~~~~~~~d~ii~~~~~~~~~~-------------------------------~~~~i~n 157 (348)
T TIGR01133 127 -------------L-----TNKLLSRFAKKVLISFPGAKDHF-------------------------------EAVLVGN 157 (348)
T ss_pred -------------H-----HHHHHHHHhCeeEECchhHhhcC-------------------------------CceEEcC
Confidence 0 02335678999999998654321 3478999
Q ss_pred CCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCCcE
Q 001557 431 GIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITT-LVKAFGECRPLRELANL 509 (1054)
Q Consensus 431 GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~~~~~~~l 509 (1054)
|++...+.+.. . ..++..+++.++|+++|+....|++.. +++|+..+.. ....+
T Consensus 158 ~v~~~~~~~~~-~----------------------~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~--~~~~~ 212 (348)
T TIGR01133 158 PVRQEIRSLPV-P----------------------RERFGLREGKPTILVLGGSQGAKILNELVPKALAKLAE--KGIQI 212 (348)
T ss_pred CcCHHHhcccc-h----------------------hhhcCCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhh--cCcEE
Confidence 99876554211 0 012333467789999998888888765 5588887743 23344
Q ss_pred EEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHH
Q 001557 510 TLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAA 589 (1054)
Q Consensus 510 ~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA 589 (1054)
.++.|+++ ...+.+.+.++++...+.|. . .+++.+|..| |++|.++ | +.+++|||+
T Consensus 213 ~~~~g~~~------------~~~l~~~~~~~~l~~~v~~~---~-~~~~~~l~~a----d~~v~~~---g-~~~l~Ea~~ 268 (348)
T TIGR01133 213 VHQTGKND------------LEKVKNVYQELGIEAIVTFI---D-ENMAAAYAAA----DLVISRA---G-ASTVAELAA 268 (348)
T ss_pred EEECCcch------------HHHHHHHHhhCCceEEecCc---c-cCHHHHHHhC----CEEEECC---C-hhHHHHHHH
Confidence 33445442 24566667777775555565 2 3899999999 9999864 2 789999999
Q ss_pred cCCCEEEccccC-------cccceeeCCceEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHH
Q 001557 590 YGLPIVATKNGG-------PVDIHRVLDNGLLVDPHD--QQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCK 658 (1054)
Q Consensus 590 ~G~PVIat~~Gg-------~~eiv~~~~~Gllv~p~d--~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~ 658 (1054)
+|+|+|+++.++ ..+++.++.+|+++++.| +++++++|.++++|++.+++|++++++.++.+.-+++++
T Consensus 269 ~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 269 AGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPANLEAMAEAARKLAKPDAAKRIAE 346 (348)
T ss_pred cCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcCCccHHHHHHh
Confidence 999999998754 235777888999999876 999999999999999999999999988776666555553
No 97
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=99.91 E-value=3.2e-22 Score=241.55 Aligned_cols=529 Identities=16% Similarity=0.092 Sum_probs=351.8
Q ss_pred ceEEEEcCCCchHHHHHHHcc-CCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecC
Q 001557 307 PVAIHGHYADAGDAAALLSGA-LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITST 385 (1054)
Q Consensus 307 pDVIh~h~~~a~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S 385 (1054)
-|+|-.|++...++..++... ..+.+-+..|+-.+.. +.+. .....+.| -..+..++.+-..+
T Consensus 141 ~d~vwihdyhlmllp~~lr~~~~~~~ig~flhspfpss-Ei~r------------~lp~r~eI---l~gll~~~~i~f~t 204 (732)
T KOG1050|consen 141 GDIVWIHDYHLMLLPQMLRERFNSAKIGFFLHSPFPSS-EIYR------------CLPVRKEI---LRGLLYDDLLGFHT 204 (732)
T ss_pred CCcEEEEcchhhccchhhhcccccceEEEeccCCCChH-HHHH------------hcccHHHH---HHhhhccCcccccc
Confidence 577777766444444444443 4556667778754422 1110 00011111 23577888888888
Q ss_pred HHHHHHHHhhhcCCChHHHHHHHHhHh-----cccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCC
Q 001557 386 RQEIEEQWRLYDGFDPVLERKLRARIK-----RGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDP 460 (1054)
Q Consensus 386 ~~~~~~~~~~y~~~~~~l~~~l~~r~~-----~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~ 460 (1054)
.+....+.... -|.+..... -||+..|+.. .+..+|.|||..+|....... ...
T Consensus 205 ~d~arhFls~c-------~R~l~~~~~s~~~~~~v~~rgr~~-~v~~~pigid~~r~v~~~~~~-------------~~~ 263 (732)
T KOG1050|consen 205 DDYARHFLSTC-------SRLLGLEVASKFPTAGVSGRGRDV-SVKALPIGIDVQRFVKLLELP-------------YVG 263 (732)
T ss_pred ccHHHHHHHHH-------HHHHHhhhhccCCcceEEecccee-eeeecccccchHHhhccccch-------------hHH
Confidence 77666544332 233333333 4566667655 789999999999987432110 111
Q ss_pred chhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEEE------ecCCCchhhhhchHHHHHH
Q 001557 461 PIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTLIM------GNRDDIDEMSGTNAALLLS 532 (1054)
Q Consensus 461 ~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~--~l~LIi------G~~~~~~~~~~~~~~~~~~ 532 (1054)
....+++..+ .++++|+.++|+++.||+..-+.||+++....+.. +++++. +.+..++.++......+.+
T Consensus 264 ~~~~ei~~~~--~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~r 341 (732)
T KOG1050|consen 264 SKGMEIKEPF--KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVRR 341 (732)
T ss_pred HHHHHHhhhc--cCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhhhh
Confidence 1222333332 57899999999999999999999999998666554 344322 3444556677777788888
Q ss_pred HHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHc-----CCCEEEccccCccccee
Q 001557 533 ILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAY-----GLPIVATKNGGPVDIHR 607 (1054)
Q Consensus 533 i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~-----G~PVIat~~Gg~~eiv~ 607 (1054)
+++........+.+.+...++..++.++|..| |++++.++.+|++++.+|+.+| |..|++..+|.. +..
T Consensus 342 In~~f~~~~~~pV~~~~~~~~~~~l~a~~~Va----ev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~-~tl- 415 (732)
T KOG1050|consen 342 INEKFGSASYQPVHSLLKDLPFLELLALYKVA----EVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDD-TTL- 415 (732)
T ss_pred hhhccCCcccceEEEeeccCCHHHHhhhHHhh----hheeecccccccchhhhHHHHhhcccCCceEEeeecccc-ccc-
Confidence 88888888877778889999999999999999 9999999999999999999999 344555555554 443
Q ss_pred eCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH-HHHhcCCHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCC
Q 001557 608 VLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGL-KNIHQFSWPEHCKSYLSRISSCKQRQPRWQRSDDGLDNSES 686 (1054)
Q Consensus 608 ~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~-~~v~~fsw~~~a~~yl~~l~~~~~~~~~~~~~~~~~~~s~~ 686 (1054)
+...++++|+|.++++.+|..++++++...+++.... +.+..++...|+..++..+.++........+..+
T Consensus 416 -~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~~l~~~~~~~~~~~~~~~------- 487 (732)
T KOG1050|consen 416 -EDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQGLKRIWKVGFLGFRVTP------- 487 (732)
T ss_pred -cccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHHhhhhhhhhccccccccc-------
Confidence 3468899999999999999999998777666555444 3446788888998888855444322210011100
Q ss_pred CCCCCCccccccccccccccccCCCCCCCCCCCCCcchhhhhccchhhhHHHHHHhhccccCCCccCccCccCCCCCccc
Q 001557 687 DSPGDSWRDIHDLSLNLKLSLEGDKNEGGSTLDNSLDTEENAVTGKNKLENAVLALSNRTIGGTQKADHNVASGKFPALR 766 (1054)
Q Consensus 687 ~~~~~~lr~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 766 (1054)
+ ++ .+.++..|+++++
T Consensus 488 ------~-----l~----------------------------------~~~~i~~y~~s~~------------------- 503 (732)
T KOG1050|consen 488 ------L-----LT----------------------------------AEHIVSDYKKSKK------------------- 503 (732)
T ss_pred ------c-----cC----------------------------------hhHhhhhhhhccc-------------------
Confidence 0 11 2345666776555
Q ss_pred CCCEEEEEEecCCCChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHh-CCCCCCCCcEEEEcCCcEEEcC
Q 001557 767 RRKYVFVIAADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVS-GGLSPLAFDAFICNSGSELYYP 845 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~-l~l~~~~~d~lI~~nGa~I~~~ 845 (1054)
|+|++|+|+|+....+..+...|+.|..+ ++..+.|++||....+..++.. .++ +++++||..+..+
T Consensus 504 ---rli~ldyd~t~~~~~~~~~~~~l~~L~~d---p~n~v~i~s~~~r~~l~~~~~~~~~l------gl~aEhG~f~r~~ 571 (732)
T KOG1050|consen 504 ---RLILLDYDLTLIPPRSIKAISILKDLCSD---PKNIVYIVSGRGRSVLEKWFFGCKNL------GLAAEHGYFVRIP 571 (732)
T ss_pred ---eEEEecccccccCCCCchHHHHHHHHhcC---CCCeEEEEEccCchhhhhhccccccc------eeecccCceeccC
Confidence 99999999999433333377888888887 7788889999999998777633 233 7999999999987
Q ss_pred CCCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEecCCCCC---cc
Q 001557 846 SSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMI---PP 922 (1054)
Q Consensus 846 ~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~~~~~---~~ 922 (1054)
+. |.... .|.+|...+ .+..+.+.++++++..+.+ ...+.|++.+.+.. ..
T Consensus 572 ~~-----w~~~~-~~~~w~~~v-----~~i~~~~~ert~GS~ie~k---------------~~~l~~hy~~ad~~~g~~q 625 (732)
T KOG1050|consen 572 GK-----WETCV-LDLDWKDLV-----KDIFQYYTERTPGSYIERK---------------ETALVWHYRNADPEFGELQ 625 (732)
T ss_pred Cc-----eeeec-ccccHHHHH-----HHHHHHHHhcCCCceeccc---------------CceEEEeeeccCcchhHHH
Confidence 52 11111 233443322 2345667778888777654 34566777655322 23
Q ss_pred HHHHHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcc
Q 001557 923 VKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVH 995 (1054)
Q Consensus 923 ~~el~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag 995 (1054)
+.++...|......+++.. +...+||-|.++|||.|...+...+.-+++.+++ .||... | ++||....
T Consensus 626 A~el~~~l~~~~~~~~v~~--g~~~Vev~~~gvsk~~~~~~~~~~~~~~~df~~c-~g~d~t-D-ed~~~~~~ 693 (732)
T KOG1050|consen 626 AKELLEHLESKNEPVEVVR--GKHIVEVRPQGVSKGLAAERILSEMVKEPDFVLC-IGDDRT-D-EDMFEFIS 693 (732)
T ss_pred HHHHHHHhcccCCCeEEEe--cCceEEEcccccchHHHHHHHHHhcCCCcceEEE-ecCCCC-h-HHHHHHHh
Confidence 4566666655223344433 3348999999999999999999999833444555 777444 8 99998653
No 98
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.91 E-value=1.2e-23 Score=225.14 Aligned_cols=211 Identities=16% Similarity=0.155 Sum_probs=148.6
Q ss_pred EEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcCC
Q 001557 770 YVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPS 846 (1054)
Q Consensus 770 kLiv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~~ 846 (1054)
|+|++|+|||| ++.+++.++++|+++++. |+.|+|||||++..+..+++.++++ .++||+||+.|++.+
T Consensus 2 k~v~~DlDGTLl~~~~~i~~~~~~~i~~l~~~----g~~~~~~TGR~~~~~~~~~~~l~~~----~~~i~~NGa~i~~~~ 73 (215)
T TIGR01487 2 KLVAIDIDGTLTEPNRMISERAIEAIRKAEKK----GIPVSLVTGNTVPFARALAVLIGTS----GPVVAENGGVIFYNK 73 (215)
T ss_pred cEEEEecCCCcCCCCcccCHHHHHHHHHHHHC----CCEEEEEcCCcchhHHHHHHHhCCC----CcEEEccCcEEEeCC
Confidence 79999999999 467999999999999986 9999999999999999999999883 379999999999863
Q ss_pred CCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEecCCCCCccHHHH
Q 001557 847 SSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIPPVKEL 926 (1054)
Q Consensus 847 ~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~~~~~~~~~el 926 (1054)
. ... +.. ....|....... ..++.... .. ........+.. .. ...+.+
T Consensus 74 ~--------~~~----~~~-~~~~~~~~~~~~--~~~~~~~~-----------~~--~~~~~~~~~~~-~~---~~~~~~ 121 (215)
T TIGR01487 74 E--------DIF----LAN-MEEEWFLDEEKK--KRFPRDRL-----------SN--EYPRASLVIMR-EG---KDVDEV 121 (215)
T ss_pred C--------cEE----Eec-ccchhhHHHhhh--hhhhhhhc-----------cc--ccceeEEEEec-CC---ccHHHH
Confidence 1 000 000 000010000000 00000000 00 00011122222 11 234566
Q ss_pred HHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEecCcchh
Q 001557 927 RKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGES 1006 (1054)
Q Consensus 927 ~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMgNa~~~ 1006 (1054)
++.+... .+.+..+ +. .+||+|.+++||.|++++++++|++++++++ +||+.| | ++||+.+|.||||+||.
T Consensus 122 ~~~l~~~--~~~~~~~-~~-~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~-iGDs~N-D-~~ml~~ag~~vam~na~-- 192 (215)
T TIGR01487 122 REIIKER--GLNLVDS-GF-AIHIMKKGVDKGVGVEKLKELLGIKPEEVAA-IGDSEN-D-IDLFRVVGFKVAVANAD-- 192 (215)
T ss_pred HHHHHhC--CeEEEec-Cc-eEEEecCCCChHHHHHHHHHHhCCCHHHEEE-ECCCHH-H-HHHHHhCCCeEEcCCcc--
Confidence 6666543 3455444 43 8999999999999999999999999999999 999999 9 99999999999999998
Q ss_pred HHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHH
Q 001557 1007 ARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASL 1045 (1054)
Q Consensus 1007 ~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al 1045 (1054)
.+++..++ ++|.+.+.+||+++|
T Consensus 193 ~~~k~~A~----------------~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 193 DQLKEIAD----------------YVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHHHhCC----------------EEcCCCCCchhhhhC
Confidence 45555444 888899999999875
No 99
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.90 E-value=2.2e-22 Score=231.44 Aligned_cols=347 Identities=17% Similarity=0.177 Sum_probs=253.7
Q ss_pred ccccCCCChHHH----------HHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHccC-CCCEEEEeC
Q 001557 269 QKELLWPHIPEF----------VDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGAL-NVPMVFTGH 337 (1054)
Q Consensus 269 ~k~~l~~~l~~f----------~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~~-~iP~V~t~H 337 (1054)
.+..|||-+..+ .++.......++..+.+....+ |+|-.|++...+++.++.... ..++.|..|
T Consensus 105 sn~iLWP~~Hy~~~~~~~~~~~w~~Y~~vN~~FAd~i~~~~~~g-----DiIWVhDYhL~L~P~mlR~~~~~~~IgfFlH 179 (486)
T COG0380 105 SNAILWPLFHYFIDDVAYERNWWDAYVKVNRKFADKIVEIYEPG-----DIIWVHDYHLLLVPQMLRERIPDAKIGFFLH 179 (486)
T ss_pred hHhhhcceeeeecCccccchHHHHHHHHHHHHHHHHHHHhcCCC-----CEEEEEechhhhhHHHHHHhCCCceEEEEEe
Confidence 345677754432 2333334444555555543332 899999987777777776543 467888999
Q ss_pred CCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhccccc
Q 001557 338 SLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSC 417 (1054)
Q Consensus 338 ~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~ 417 (1054)
-.++..- +.....+.+.| -..+-.||.|-+.|+..+..+..... +.+......++..
T Consensus 180 iPfPssE-------------vfr~lP~r~eI---l~gll~~dligFqt~~y~~nF~~~~~-------r~~~~~~~~~~~~ 236 (486)
T COG0380 180 IPFPSSE-------------VFRCLPWREEI---LEGLLGADLIGFQTESYARNFLDLCS-------RLLGVTGDADIRF 236 (486)
T ss_pred CCCCCHH-------------HHhhCchHHHH---HHHhhcCCeeEecCHHHHHHHHHHHH-------Hhccccccccccc
Confidence 7665431 11111111111 23577999999999998887665543 2332222233333
Q ss_pred C---CCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHH
Q 001557 418 H---GRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLV 494 (1054)
Q Consensus 418 ~---g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll 494 (1054)
- |+. .++..+|.|||+..|.....+ ......+.++.+.+. .++++|+.++|+|+.||+...+
T Consensus 237 ~~~~~~~-v~v~a~PIgID~~~~~~~~~~-------------~~v~~~~~el~~~~~-~~~kiivgvDRlDy~kGi~~rl 301 (486)
T COG0380 237 NGADGRI-VKVGAFPIGIDPEEFERALKS-------------PSVQEKVLELKAELG-RNKKLIVGVDRLDYSKGIPQRL 301 (486)
T ss_pred cccCCce-EEEEEEeeecCHHHHHHhhcC-------------CchhhHHHHHHHHhc-CCceEEEEehhcccccCcHHHH
Confidence 3 233 389999999999999743211 112234555655553 3389999999999999999999
Q ss_pred HHHHhcccccCCC--cEEEEE------ecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhc
Q 001557 495 KAFGECRPLRELA--NLTLIM------GNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 566 (1054)
Q Consensus 495 ~A~~~l~~~~~~~--~l~LIi------G~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~ 566 (1054)
.||++|+..+|.. +++++. ++.+.|..+..+..+.+++|++.++..++.|..++...++++++.++|+.|
T Consensus 302 ~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~a-- 379 (486)
T COG0380 302 LAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAA-- 379 (486)
T ss_pred HHHHHHHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhh--
Confidence 9999998767665 444432 334455567788889999999999999999999999999999999999999
Q ss_pred CCcEEEecCCCCCCcHHHHHHHHc-----CCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHH
Q 001557 567 TKGVFINPAFIEPFGLTLIEAAAY-----GLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCR 641 (1054)
Q Consensus 567 ~~dv~v~ps~~Egfgl~l~EAmA~-----G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~ 641 (1054)
|+++++|++|||+||.+||.|| |..|++..+|+..++ ..+++|||+|.+++|++|.++|+++.+.++.+
T Consensus 380 --Dv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L----~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r 453 (486)
T COG0380 380 --DVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASEL----RDALIVNPWDTKEVADAIKRALTMSLEERKER 453 (486)
T ss_pred --ceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccchhhh----ccCEeECCCChHHHHHHHHHHhcCCHHHHHHH
Confidence 9999999999999999999999 889999999999988 45999999999999999999999766655554
Q ss_pred -HHHHHHHhcCCHHHHHHHHHHHHHH
Q 001557 642 -QNGLKNIHQFSWPEHCKSYLSRISS 666 (1054)
Q Consensus 642 -~~~~~~v~~fsw~~~a~~yl~~l~~ 666 (1054)
+..++.+..++...|+..|++.+..
T Consensus 454 ~~~~~~~v~~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 454 HEKLLKQVLTHDVARWANSFLDDLAQ 479 (486)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 4455556899999999999998885
No 100
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.90 E-value=4.3e-23 Score=242.26 Aligned_cols=325 Identities=16% Similarity=0.135 Sum_probs=208.2
Q ss_pred HHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHcc-CCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHH
Q 001557 289 IQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGA-LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRR 367 (1054)
Q Consensus 289 ~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~r 367 (1054)
..++..+.+.+. .-|+|-.|++...+++.++.+. .+.++.|..|-.++..- .+ ....+...
T Consensus 129 ~~FA~~i~~~~~-----~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e-~f------------r~lP~r~e 190 (474)
T PF00982_consen 129 RRFADAIAEVYR-----PGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPSSE-IF------------RCLPWREE 190 (474)
T ss_dssp HHHHHHHGGG-------TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S----HH-HH------------TTSTTHHH
T ss_pred HHHHHHHHHhCc-----CCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCCHH-HH------------hhCCcHHH
Confidence 445555555544 2589999998777777777654 46788999998765331 11 01111111
Q ss_pred HHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhc---ccccCCCCCCcEEEeCCCCcCCCcccCCCCC
Q 001557 368 IEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKR---GVSCHGRFMPRMVVIPPGIEFHHIVRHNGDV 444 (1054)
Q Consensus 368 i~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~---gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~ 444 (1054)
| -..+-.||+|-+.|...++.+.... .+.++.+... ++...|+.. ++.++|.|||++.|......
T Consensus 191 i---L~glL~aDlIgFqt~~~~~nFl~~~-------~r~lg~~~~~~~~~v~~~Gr~v-~v~~~pigId~~~~~~~~~~- 258 (474)
T PF00982_consen 191 I---LRGLLGADLIGFQTFEYARNFLSCC-------KRLLGLEVDSDRGTVEYNGRRV-RVGVFPIGIDPDAFAQLARS- 258 (474)
T ss_dssp H---HHHHTTSSEEEESSHHHHHHHHHHH-------HHHS-EEEEETTE-EEETTEEE-EEEE------HHHHHHHHH--
T ss_pred H---HHHhhcCCEEEEecHHHHHHHHHHH-------HHHcCCcccCCCceEEECCEEE-EEEEeeccCChHHHHhhccC-
Confidence 1 2357799999999999888765532 2232222222 466666666 89999999999998732111
Q ss_pred CCcccccCCCCCCCCCchhHHHhhhcCCCC-CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEEE------ec
Q 001557 445 DGEVERDEGSPASPDPPIWSEIMHFFSNPR-KPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTLIM------GN 515 (1054)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~--~l~LIi------G~ 515 (1054)
.........++..+ .+ .++|+.++|+|+.|||...++||+.|.+.+|.. +++|+- .+
T Consensus 259 ------------~~v~~~~~~l~~~~--~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~ 324 (474)
T PF00982_consen 259 ------------PEVQERAEELREKF--KGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSRED 324 (474)
T ss_dssp ------------S---HHHHHHHHHT--TT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STT
T ss_pred ------------hHHHHHHHHHHHhc--CCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCcc
Confidence 12233344454444 34 589999999999999999999999998777664 465532 23
Q ss_pred CCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHc-----
Q 001557 516 RDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAY----- 590 (1054)
Q Consensus 516 ~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~----- 590 (1054)
.++|++++.+..+.+++||+..++.++.+.+++.+.++++++.++|+.| ||++++|++|||+|+.+||+||
T Consensus 325 ~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~a----Dv~lvTslrDGmNLva~Eyva~q~~~~ 400 (474)
T PF00982_consen 325 VPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAA----DVALVTSLRDGMNLVAKEYVACQDDNP 400 (474)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-----SEEEE--SSBS--HHHHHHHHHS-TS-
T ss_pred chhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhh----hhEEecchhhccCCcceEEEEEecCCC
Confidence 3456678888899999999999999999999999999999999999999 9999999999999999999999
Q ss_pred CCCEEEccccCcccceeeCCce-EEeCCCCHHHHHHHHHHHHhCHHHHHHH-HHHHHHHHhcCCHHHHHHHHHHHHH
Q 001557 591 GLPIVATKNGGPVDIHRVLDNG-LLVDPHDQQSIADALLKLVSDKQLWERC-RQNGLKNIHQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 591 G~PVIat~~Gg~~eiv~~~~~G-llv~p~d~~~la~aI~~ll~d~~~~~~~-~~~~~~~v~~fsw~~~a~~yl~~l~ 665 (1054)
|+.|++..+|+..++ ..| ++|||+|++++|+||.++|+++.+.++. .+..++.+..++...|++.|++.++
T Consensus 401 GvLiLSefaGaa~~L----~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~ 473 (474)
T PF00982_consen 401 GVLILSEFAGAAEQL----SEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDLK 473 (474)
T ss_dssp -EEEEETTBGGGGT-----TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHH
T ss_pred CceEeeccCCHHHHc----CCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhh
Confidence 778899989988777 434 9999999999999999999977655444 4555666799999999999999876
No 101
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.90 E-value=8.4e-23 Score=226.78 Aligned_cols=245 Identities=16% Similarity=0.119 Sum_probs=153.7
Q ss_pred CEEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcC
Q 001557 769 KYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 845 (1054)
Q Consensus 769 kkLiv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~ 845 (1054)
.|+|++|+|||| .+.+++.++++|++++++ |+.|+|||||++..+..+++++++. +++||.||+.||++
T Consensus 4 ~kli~~DlDGTLl~~~~~~~~~~~~ai~~l~~~----Gi~~~iaTgR~~~~~~~~~~~l~l~----~~~i~~nGa~i~~~ 75 (273)
T PRK00192 4 KLLVFTDLDGTLLDHHTYSYEPAKPALKALKEK----GIPVIPCTSKTAAEVEVLRKELGLE----DPFIVENGAAIYIP 75 (273)
T ss_pred ceEEEEcCcccCcCCCCcCcHHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCCC----CCEEEEcCcEEEec
Confidence 689999999999 356888999999999986 9999999999999999999999983 47999999999975
Q ss_pred CCCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhh-c--cCCC-Ccc-------Cccccc--ccccCcceEEEE
Q 001557 846 SSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAAS-V--NDKK-GEE-------GKIVEE--DESRSTIHCYAF 912 (1054)
Q Consensus 846 ~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~-~--~~~~-~~~-------~~~v~~--~~~~~~~~kis~ 912 (1054)
+.............+..|. +......+.+.+++..+... . .... ... ...-.+ ........+..+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (273)
T PRK00192 76 KNYFPFQPDGERLKGDYWV--IELGPPYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPF 153 (273)
T ss_pred ccccccCCccccccCCceE--EEcCCCHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCce
Confidence 4210000000000000110 11122333333333222110 0 0000 000 000000 000001111112
Q ss_pred E-ecCCCCCccHHHHHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCc-cCEEEEeCcCCCcccccc
Q 001557 913 E-VTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDL-SNVVVIAGECGDTDYEGL 990 (1054)
Q Consensus 913 ~-~~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~-e~vvaf~GD~~d~D~~eM 990 (1054)
. ... ....+.+.+.+...+ +.++.+ + +++||+|.+ |||.|+++|++++|+++ +++++ +||+.| | ++|
T Consensus 154 ~~~~~---~~~~~~~~~~l~~~~--~~~~~~-~-~~~ei~~~~-~Kg~al~~l~~~~~i~~~~~v~~-~GDs~N-D-i~m 222 (273)
T PRK00192 154 LWNGS---EAAKERFEEALKRLG--LKVTRG-G-RFLHLLGGG-DKGKAVRWLKELYRRQDGVETIA-LGDSPN-D-LPM 222 (273)
T ss_pred eecCc---hHHHHHHHHHHHHcC--CEEEEC-C-eEEEEeCCC-CHHHHHHHHHHHHhccCCceEEE-EcCChh-h-HHH
Confidence 2 111 124556666665433 444443 4 499999999 99999999999999999 99999 888888 8 999
Q ss_pred ccCcceEEEecCcchhHHhh----hhccCCCcccccccCCCceEEeccccCHHHHHHHHHH-hc
Q 001557 991 LGGVHKTVILKGVGESARKL----HANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEK-LG 1049 (1054)
Q Consensus 991 L~~ag~gVaMgNa~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al~~-~~ 1049 (1054)
|+.+|++|||+||. .+++ ..++ ...++|.+...|||+++|++ ||
T Consensus 223 ~~~ag~~vam~NA~--~~~k~~~~~~a~-------------~~v~~~~~~~~~Gv~~~l~~~~~ 271 (273)
T PRK00192 223 LEAADIAVVVPGPD--GPNPPLLPGIAD-------------GEFILASAPGPEGWAEAINKLLS 271 (273)
T ss_pred HHhCCeeEEeCCCC--CCCcccCccccC-------------CceEEecCCCcHHHHHHHHHHHh
Confidence 99999999999999 2111 1110 23345578889999999997 44
No 102
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=99.87 E-value=1.1e-21 Score=216.20 Aligned_cols=195 Identities=12% Similarity=0.040 Sum_probs=133.0
Q ss_pred CCEEEEEEecCCCC--------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCC
Q 001557 768 RKYVFVIAADCDTT--------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSG 839 (1054)
Q Consensus 768 ~kkLiv~DiDGTL~--------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nG 839 (1054)
.+.+|++|+||||. +.+++.++++|++|++. +|+.|+|+|||++..+.++++.+++ .+||+||
T Consensus 13 ~~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~---~g~~v~i~SGR~~~~~~~~~~~~~~------~~i~~nG 83 (266)
T PRK10187 13 ANYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATA---NDGALALISGRSMVELDALAKPYRF------PLAGVHG 83 (266)
T ss_pred CCEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhC---CCCcEEEEeCCCHHHHHHhcCcccc------eEEEeCC
Confidence 36899999999992 36889999999999984 5899999999999999999987765 4899999
Q ss_pred cEEEcCCCCCCCCCCCccccCccchhhhccccChhh---HHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEecC
Q 001557 840 SELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEG---LRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTN 916 (1054)
Q Consensus 840 a~I~~~~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~---l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~ 916 (1054)
++|+..++ .. +...+...|..+. +++.+.+.++...+.+ ...++++++.
T Consensus 84 a~i~~~~~--------~~-----~~~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k---------------~~~~~~h~r~ 135 (266)
T PRK10187 84 AERRDING--------KT-----HIVHLPDAIARDISVQLHTALAQLPGAELEAK---------------GMAFALHYRQ 135 (266)
T ss_pred CeeecCCC--------Ce-----eeccCChhHHHHHHHHHHHHhccCCCcEEEeC---------------CcEEEEECCC
Confidence 99986531 00 1111222221111 1111222223222221 2334455533
Q ss_pred CCC-CccHHHHHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCc-
Q 001557 917 PQM-IPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGV- 994 (1054)
Q Consensus 917 ~~~-~~~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~a- 994 (1054)
... ...+.++.+.+......+ .+.+.+ .++||.|+++|||.||++|++++|++.+++++ +||+.| | ++||+.+
T Consensus 136 ~~~~~~~~~~l~~~i~~~~~~~-~~~~g~-~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~-~GD~~n-D-~~mf~~~~ 210 (266)
T PRK10187 136 APQHEDALLALAQRITQIWPQL-ALQPGK-CVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF-VGDDLT-D-EAGFAVVN 210 (266)
T ss_pred CCccHHHHHHHHHHHHhhCCce-EEeCCC-EEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE-EcCCcc-H-HHHHHHHH
Confidence 221 122334444443333222 334444 59999999999999999999999999999888 788888 8 9999999
Q ss_pred ---ceEEEecCcc
Q 001557 995 ---HKTVILKGVG 1004 (1054)
Q Consensus 995 ---g~gVaMgNa~ 1004 (1054)
|.||+|||+.
T Consensus 211 ~~~g~~vavg~a~ 223 (266)
T PRK10187 211 RLGGISVKVGTGA 223 (266)
T ss_pred hcCCeEEEECCCC
Confidence 9999999987
No 103
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.87 E-value=3.2e-20 Score=219.56 Aligned_cols=283 Identities=15% Similarity=0.196 Sum_probs=188.5
Q ss_pred CcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEec
Q 001557 305 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 384 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~ 384 (1054)
.+||+||++...........++..++|+|++.|.+....... ++...+ .++..++.+|.|++.
T Consensus 123 ~~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~~s~~~---------------~~~~~~--~~r~~~~~~d~ii~~ 185 (425)
T PRK05749 123 WRPKLVIIMETELWPNLIAELKRRGIPLVLANARLSERSFKR---------------YQKFKR--FYRLLFKNIDLVLAQ 185 (425)
T ss_pred hCCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCChhhHHH---------------HHHHHH--HHHHHHHhCCEEEEC
Confidence 569999988543222223345667999998876543222111 111111 234568899999999
Q ss_pred CHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhH
Q 001557 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS 464 (1054)
Q Consensus 385 S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1054)
|+...+.+.. +|.+.. +.++||+ +++.+.+.. .......
T Consensus 186 S~~~~~~l~~-----------------------~g~~~~-i~vi~n~-~~d~~~~~~----------------~~~~~~~ 224 (425)
T PRK05749 186 SEEDAERFLA-----------------------LGAKNE-VTVTGNL-KFDIEVPPE----------------LAARAAT 224 (425)
T ss_pred CHHHHHHHHH-----------------------cCCCCC-cEecccc-cccCCCChh----------------hHHHHHH
Confidence 9987766432 122223 7788874 333332110 0001111
Q ss_pred HHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCC
Q 001557 465 EIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLY 543 (1054)
Q Consensus 465 ~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~ 543 (1054)
.+..+. +++++|+++|+. .|+...+++|+..+.+. .+++.| |+|.++.. ..++.+++.++++.
T Consensus 225 ~r~~~~--~~~~vil~~~~~--~~~~~~ll~A~~~l~~~--~~~~~liivG~g~~r----------~~~l~~~~~~~gl~ 288 (425)
T PRK05749 225 LRRQLA--PNRPVWIAASTH--EGEEELVLDAHRALLKQ--FPNLLLILVPRHPER----------FKEVEELLKKAGLS 288 (425)
T ss_pred HHHHhc--CCCcEEEEeCCC--chHHHHHHHHHHHHHHh--CCCcEEEEcCCChhh----------HHHHHHHHHhCCCc
Confidence 122222 567888888874 68899999999988543 356655 66776531 24577778888875
Q ss_pred CCEEeCCCCC------------CCcHHHHHHHhhcCCcEEEe-cCCCCCCcHHHHHHHHcCCCEEEccc-cCcccceeeC
Q 001557 544 GQVAYPKHHK------------QSDVPDIYRLAAKTKGVFIN-PAFIEPFGLTLIEAAAYGLPIVATKN-GGPVDIHRVL 609 (1054)
Q Consensus 544 ~~V~~~g~~~------------~~dl~~ly~~Aa~~~dv~v~-ps~~Egfgl~l~EAmA~G~PVIat~~-Gg~~eiv~~~ 609 (1054)
. +.+.+... ..+++.+|+.| |++++ +|+.|++|++++||||||+|||+++. ++..+++...
T Consensus 289 ~-~~~~~~~~~~~~~~v~l~~~~~el~~~y~~a----Di~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~ 363 (425)
T PRK05749 289 Y-VRRSQGEPPSADTDVLLGDTMGELGLLYAIA----DIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERL 363 (425)
T ss_pred E-EEccCCCCCCCCCcEEEEecHHHHHHHHHhC----CEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHH
Confidence 2 44443211 35899999999 99655 67889999999999999999999875 5566665442
Q ss_pred -CceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Q 001557 610 -DNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCK 668 (1054)
Q Consensus 610 -~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~~ 668 (1054)
.+|+++.|.|+++++++|.++++|++.+++|++++++.++.. ...++++++.+...+
T Consensus 364 ~~~g~~~~~~d~~~La~~l~~ll~~~~~~~~m~~~a~~~~~~~--~~~~~~~~~~l~~~l 421 (425)
T PRK05749 364 LQAGAAIQVEDAEDLAKAVTYLLTDPDARQAYGEAGVAFLKQN--QGALQRTLQLLEPYL 421 (425)
T ss_pred HHCCCeEEECCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHhc
Confidence 468888899999999999999999999999999999999533 255677777776544
No 104
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.86 E-value=2.8e-20 Score=220.35 Aligned_cols=257 Identities=12% Similarity=0.163 Sum_probs=167.5
Q ss_pred CccCCCCCcccCCCEEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCc
Q 001557 756 NVASGKFPALRRRKYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFD 832 (1054)
Q Consensus 756 ~~~~~~~p~~~~~kkLiv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d 832 (1054)
+.+++..|.....+|+|++|+|||| ++.+++.++++|++++++ |+.|++||||++..+..+++++++. +
T Consensus 403 ~~~~~~~~~~~~~~KLIfsDLDGTLLd~d~~i~~~t~eAL~~L~ek----GI~~VIATGRs~~~i~~l~~~Lgl~----~ 474 (694)
T PRK14502 403 AARPSRLPSSGQFKKIVYTDLDGTLLNPLTYSYSTALDALRLLKDK----ELPLVFCSAKTMGEQDLYRNELGIK----D 474 (694)
T ss_pred hhhcccCCCcCceeeEEEEECcCCCcCCCCccCHHHHHHHHHHHHc----CCeEEEEeCCCHHHHHHHHHHcCCC----C
Confidence 4567777877888999999999999 245677899999999987 9999999999999999999999983 5
Q ss_pred EEEEcCCcEEEcCCCCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhcc---C----C-----CCccCc----
Q 001557 833 AFICNSGSELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVN---D----K-----KGEEGK---- 896 (1054)
Q Consensus 833 ~lI~~nGa~I~~~~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~---~----~-----~~~~~~---- 896 (1054)
++||+||+.|+.+.+.........-..+ .+. .....+..+.+++++..+..... . . ......
T Consensus 475 ~~I~eNGA~I~~~~~~~~~~~~~~~~~~-~~i-I~~~~l~~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~e 552 (694)
T PRK14502 475 PFITENGGAIFIPKDYFRLPFAYDRVAG-NYL-VIELGMAYKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVED 552 (694)
T ss_pred eEEEcCCCEEEECCCcccccccccccCC-CeE-EEEcCCCHHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHH
Confidence 7999999999986531100000000000 000 11223344444444433222100 0 0 000000
Q ss_pred ----------ccccccccCcceEEEEEecCCCCCccHHHHHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHH
Q 001557 897 ----------IVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHV 966 (1054)
Q Consensus 897 ----------~v~~~~~~~~~~kis~~~~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~ 966 (1054)
...+........|+.+. .++ ..++++.+.+...+ +++.. +.+++||+ .++|||+||++|++
T Consensus 553 i~~~TgL~~~~a~~a~~Re~seKIl~~-gd~---e~Leel~~~L~~~~--l~v~~--g~rfleI~-~gvdKG~AL~~L~e 623 (694)
T PRK14502 553 VSRLTDLNLKQAELAKQREYSETVHIE-GDK---RSTNIVLNHIQQSG--LEYSF--GGRFYEVT-GGNDKGKAIKILNE 623 (694)
T ss_pred HHHhhCCCHHHHHHHhhccCceeEEEc-CCH---HHHHHHHHHHHHcC--cEEEE--CCEEEEeC-CCCCHHHHHHHHHH
Confidence 00000001122455443 222 35667777777653 44443 44699999 59999999999999
Q ss_pred HhCCCccCEEEE-eCcCCCccccccccCcceEEEecCcchhHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHH
Q 001557 967 RWGIDLSNVVVI-AGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASL 1045 (1054)
Q Consensus 967 ~~gI~~e~vvaf-~GD~~d~D~~eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al 1045 (1054)
++|++.+++++| +||+.| | ++||+.+|.||||++-. ..|+ ++ ..++.. .|+.+.+.|=.+|+
T Consensus 624 ~~gI~~~eViafalGDs~N-D-isMLe~Ag~gVAM~~~~---------~~~~--~l---~~~~~~-~~~~~GP~GW~eai 686 (694)
T PRK14502 624 LFRLNFGNIHTFGLGDSEN-D-YSMLETVDSPILVQRPG---------NKWH--KM---RLRNPS-YVKGVGPEGFSRAV 686 (694)
T ss_pred HhCCCccceEEEEcCCcHh-h-HHHHHhCCceEEEcCCC---------CCCC--cc---CCCCce-ecCCCCcHHHHHHH
Confidence 999999999994 299999 9 99999999999998766 1111 11 123444 55889999999998
Q ss_pred HHh
Q 001557 1046 EKL 1048 (1054)
Q Consensus 1046 ~~~ 1048 (1054)
.++
T Consensus 687 ~~~ 689 (694)
T PRK14502 687 TDI 689 (694)
T ss_pred HHH
Confidence 775
No 105
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.86 E-value=2.4e-19 Score=208.32 Aligned_cols=266 Identities=19% Similarity=0.163 Sum_probs=177.4
Q ss_pred CcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEec
Q 001557 305 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 384 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~ 384 (1054)
....|++++.+.+..++.. ..+.++|+.+++.+.... +. .. ... ..|+.+++.||.|+++
T Consensus 101 ~~~~i~~~~~P~~~~~~~~---~~~~~~Vyd~~D~~~~~~------~~-~~--------~~~--~~e~~~~~~ad~vi~~ 160 (373)
T cd04950 101 FGRPILWYYTPYTLPVAAL---LQASLVVYDCVDDLSAFP------GG-PP--------ELL--EAERRLLKRADLVFTT 160 (373)
T ss_pred CCCcEEEEeCccHHHHHhh---cCCCeEEEEcccchhccC------CC-CH--------HHH--HHHHHHHHhCCEEEEC
Confidence 3456777665544433333 568899999998644321 10 11 001 3477789999999999
Q ss_pred CHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhH
Q 001557 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS 464 (1054)
Q Consensus 385 S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1054)
|+...+.+.. +. +++.+||||+|.+.|.+..... ..
T Consensus 161 S~~l~~~~~~-~~-------------------------~~i~~i~ngvd~~~f~~~~~~~--------------~~---- 196 (373)
T cd04950 161 SPSLYEAKRR-LN-------------------------PNVVLVPNGVDYEHFAAARDPP--------------PP---- 196 (373)
T ss_pred CHHHHHHHhh-CC-------------------------CCEEEcccccCHHHhhcccccC--------------CC----
Confidence 9977654322 11 2899999999999987532110 00
Q ss_pred HHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCC
Q 001557 465 EIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYG 544 (1054)
Q Consensus 465 ~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~ 544 (1054)
.+.....++++|+|+|++++.++++.+.++... .++..+ +++|.++..... ..+.-.+
T Consensus 197 --~~~~~~~~~~~i~y~G~l~~~~d~~ll~~la~~----~p~~~~-vliG~~~~~~~~---------------~~~~~~~ 254 (373)
T cd04950 197 --PADLAALPRPVIGYYGAIAEWLDLELLEALAKA----RPDWSF-VLIGPVDVSIDP---------------SALLRLP 254 (373)
T ss_pred --hhHHhcCCCCEEEEEeccccccCHHHHHHHHHH----CCCCEE-EEECCCcCccCh---------------hHhccCC
Confidence 001123567899999999998888766555443 233333 367776321110 1111246
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCC-----CCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCC
Q 001557 545 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFI-----EPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHD 619 (1054)
Q Consensus 545 ~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~-----Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d 619 (1054)
+|.|+|+++.++++.+|+.| |++|+|+.. +++|++++||||||+|||+|+.++..+. ...++++ +.|
T Consensus 255 nV~~~G~~~~~~l~~~l~~~----Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~~~---~~~~~~~-~~d 326 (373)
T cd04950 255 NVHYLGPKPYKELPAYLAGF----DVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVRRY---EDEVVLI-ADD 326 (373)
T ss_pred CEEEeCCCCHHHHHHHHHhC----CEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHHhh---cCcEEEe-CCC
Confidence 89999999999999999999 999999753 4679999999999999999987655443 3334444 679
Q ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 001557 620 QQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISS 666 (1054)
Q Consensus 620 ~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~ 666 (1054)
+++++++|.+++.++...... +..+.++.|||+..++++++.+.+
T Consensus 327 ~~~~~~ai~~~l~~~~~~~~~--~~~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 327 PEEFVAAIEKALLEDGPARER--RRLRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHHHHHHHHHHHhcCCchHHH--HHHHHHHHCCHHHHHHHHHHHHHh
Confidence 999999999987643222111 222245799999999999977654
No 106
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.85 E-value=3.8e-19 Score=207.18 Aligned_cols=263 Identities=14% Similarity=0.091 Sum_probs=179.2
Q ss_pred CcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEec
Q 001557 305 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 384 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~ 384 (1054)
.+||+||++++......+..+...++|++.+.++++... .++++.+|.++++
T Consensus 103 ~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~~----------------------------~~~~~~ad~i~~~ 154 (380)
T PRK13609 103 EKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLHK----------------------------IWVHREVDRYFVA 154 (380)
T ss_pred hCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCCc----------------------------ccccCCCCEEEEC
Confidence 569999998765544444444567899887666643211 1246789999999
Q ss_pred CHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhH
Q 001557 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS 464 (1054)
Q Consensus 385 S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1054)
|+...+.+.+ + |.+..++.++++.++. .|.+.. ....
T Consensus 155 s~~~~~~l~~-~----------------------gi~~~ki~v~G~p~~~-~f~~~~-------------------~~~~ 191 (380)
T PRK13609 155 TDHVKKVLVD-I----------------------GVPPEQVVETGIPIRS-SFELKI-------------------NPDI 191 (380)
T ss_pred CHHHHHHHHH-c----------------------CCChhHEEEECcccCh-HHcCcC-------------------CHHH
Confidence 9877665432 1 1122377777655543 232110 0112
Q ss_pred HHhhhcCCCCCcE-EEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCC
Q 001557 465 EIMHFFSNPRKPM-ILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDL 542 (1054)
Q Consensus 465 ~~~~~~~~~~~~~-Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l 542 (1054)
.+.++..++++++ +++.|++...||+..+++++... +++.+ ++|++. ......+.+++..++
T Consensus 192 ~~~~~~l~~~~~~il~~~G~~~~~k~~~~li~~l~~~------~~~~~viv~G~~---------~~~~~~l~~~~~~~~- 255 (380)
T PRK13609 192 IYNKYQLCPNKKILLIMAGAHGVLGNVKELCQSLMSV------PDLQVVVVCGKN---------EALKQSLEDLQETNP- 255 (380)
T ss_pred HHHHcCCCCCCcEEEEEcCCCCCCcCHHHHHHHHhhC------CCcEEEEEeCCC---------HHHHHHHHHHHhcCC-
Confidence 2334444556665 45568888889999999988643 33443 343322 112345566665554
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcc-ccCcc----cceeeCCceEEeCC
Q 001557 543 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK-NGGPV----DIHRVLDNGLLVDP 617 (1054)
Q Consensus 543 ~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~-~Gg~~----eiv~~~~~Gllv~p 617 (1054)
.+|.|+|++ ++++++|+.| |++|. ++.|++++||||||+|||+++ .+|.. +++. .+|+.+.+
T Consensus 256 -~~v~~~g~~--~~~~~l~~~a----D~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~--~~G~~~~~ 322 (380)
T PRK13609 256 -DALKVFGYV--ENIDELFRVT----SCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFE--RKGAAVVI 322 (380)
T ss_pred -CcEEEEech--hhHHHHHHhc----cEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHH--hCCcEEEE
Confidence 579999996 4799999999 99884 566999999999999999986 55532 2222 24555556
Q ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Q 001557 618 HDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSC 667 (1054)
Q Consensus 618 ~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~ 667 (1054)
.|+++++++|.++++|++.+++|++++++....++++.+++.+++.+...
T Consensus 323 ~~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 323 RDDEEVFAKTEALLQDDMKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred CCHHHHHHHHHHHHCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 79999999999999999999999999988777889999999999888654
No 107
>PTZ00174 phosphomannomutase; Provisional
Probab=99.85 E-value=1.9e-20 Score=204.73 Aligned_cols=206 Identities=12% Similarity=0.056 Sum_probs=127.0
Q ss_pred CCEEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEc
Q 001557 768 RKYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYY 844 (1054)
Q Consensus 768 ~kkLiv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~ 844 (1054)
..|||++|+|||| ++++++.++++|++++++ |+.|+|||||++..+.+.++..... ..+++||+||+.|+.
T Consensus 4 ~~klia~DlDGTLL~~~~~is~~~~~ai~~l~~~----Gi~~viaTGR~~~~i~~~l~~~~~~--~~~~~I~~NGa~I~~ 77 (247)
T PTZ00174 4 KKTILLFDVDGTLTKPRNPITQEMKDTLAKLKSK----GFKIGVVGGSDYPKIKEQLGEDVLE--DFDYVFSENGLVAYK 77 (247)
T ss_pred CCeEEEEECcCCCcCCCCCCCHHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHhhhhhc--ccCeEEeCCceEEEE
Confidence 4699999999999 467999999999999997 9999999999999998888754321 235789999999996
Q ss_pred CCCCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhh----hccCCCCccCcccccccccCcceEEEEEecC----
Q 001557 845 PSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAA----SVNDKKGEEGKIVEEDESRSTIHCYAFEVTN---- 916 (1054)
Q Consensus 845 ~~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~---- 916 (1054)
.+ +.+ +...+......+.+.+++..... ...... ...+...... ..........
T Consensus 78 ~~---------~~i----~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~ 139 (247)
T PTZ00174 78 DG---------ELF----HSQSILKFLGEEKLKKFINFCLRYIADLDIPVK---RGTFIEYRNG--MINISPIGRNCSQE 139 (247)
T ss_pred CC---------eEE----EEEcchhcCCHHHHHHHHHHHHHHHHhcCCccc---eeeeEEcCCc--eEEeccccccCCHH
Confidence 42 111 11111111122333333321111 000000 0001000000 0000000000
Q ss_pred --------CCCCccHHHHHHHHHHhcCeEEEEEeeC-CeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCc----CC
Q 001557 917 --------PQMIPPVKELRKLMRIQALRCHVIYCQN-GTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGE----CG 983 (1054)
Q Consensus 917 --------~~~~~~~~el~~~l~~~~~~~~v~~s~~-~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD----~~ 983 (1054)
........++.+.+......+.+.++.+ ..++||+|+++|||.||++|+++ +++++| ||| +.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~----~~evia-fGD~~~~~~ 214 (247)
T PTZ00174 140 ERDEFEKYDKEHHIREKFIQDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND----FKEIHF-FGDKTFEGG 214 (247)
T ss_pred HHHHHHhcCCcchHHHHHHHHHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh----hhhEEE-EcccCCCCC
Confidence 0001123456666655444456666654 24899999999999999999998 589999 888 78
Q ss_pred CccccccccCc-ceEEEecCcc
Q 001557 984 DTDYEGLLGGV-HKTVILKGVG 1004 (1054)
Q Consensus 984 d~D~~eML~~a-g~gVaMgNa~ 1004 (1054)
| | ++||+.+ -.|+.++||.
T Consensus 215 N-D-ieMl~~~~~~g~~v~n~~ 234 (247)
T PTZ00174 215 N-D-YEIYNDPRTIGHSVKNPE 234 (247)
T ss_pred C-c-HhhhhcCCCceEEeCCHH
Confidence 8 8 9999965 3556666887
No 108
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.85 E-value=1.6e-20 Score=201.95 Aligned_cols=204 Identities=15% Similarity=0.068 Sum_probs=129.0
Q ss_pred EEEEEecCCC-C--hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcCCC
Q 001557 771 VFVIAADCDT-T--SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSS 847 (1054)
Q Consensus 771 Liv~DiDGTL-~--~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~~~ 847 (1054)
+|++|+|||| + +.+++.++++|+++++. |+.|++||||++..+..+++.+++. ..++||+||+.|+....
T Consensus 1 ~i~~DlDGTLL~~~~~~~~~~~~~l~~l~~~----gi~~~i~TgR~~~~~~~~~~~l~~~---~~~~I~~NGa~i~~~~~ 73 (221)
T TIGR02463 1 WVFSDLDGTLLDSHSYDWQPAAPWLTRLQEA----GIPVILCTSKTAAEVEYLQKALGLT---GDPYIAENGAAIHLEEL 73 (221)
T ss_pred CEEEeCCCCCcCCCCCCcHHHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCCC---CCcEEEeCCcEEEcCcc
Confidence 5899999999 2 33555599999999986 9999999999999999999999983 14799999999997531
Q ss_pred CCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhh---ccCCCCcc-C-------ccccc--ccccCcceEEEEEe
Q 001557 848 STEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAAS---VNDKKGEE-G-------KIVEE--DESRSTIHCYAFEV 914 (1054)
Q Consensus 848 ~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~---~~~~~~~~-~-------~~v~~--~~~~~~~~kis~~~ 914 (1054)
... . ..|.. +......+.+.+.+..+... ........ . ..-.. ........++.+..
T Consensus 74 ~~~-------~--~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (221)
T TIGR02463 74 WRE-------E--PGYPR-IILGISYGIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLW 143 (221)
T ss_pred ccc-------C--CCceE-EecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEe
Confidence 100 0 00000 01111222222222111000 00000000 0 00000 00000112223333
Q ss_pred -cCCCCCccHHHHHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccC
Q 001557 915 -TNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGG 993 (1054)
Q Consensus 915 -~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ 993 (1054)
.+ ....+++++.+...+ +.+..+ +. ++||+|.+++||.|+++|++++||+++++++ +||+.| | ++||+.
T Consensus 144 ~~~---~~~~~~~~~~l~~~~--~~~~~~-~~-~~ei~~~~~~Kg~al~~l~~~lgi~~~~vi~-~GD~~N-D-i~ml~~ 213 (221)
T TIGR02463 144 RDS---DSRMPRFTALLADLG--LAIVQG-NR-FSHVLGASSSKGKAANWLKATYNQPDVKTLG-LGDGPN-D-LPLLEV 213 (221)
T ss_pred cCc---hhHHHHHHHHHHHcC--CeEEec-CC-eeEEecCCCCHHHHHHHHHHHhCCCCCcEEE-ECCCHH-H-HHHHHh
Confidence 21 124556666665543 444444 43 8999999999999999999999999999999 999999 9 999999
Q ss_pred cceEEEec
Q 001557 994 VHKTVILK 1001 (1054)
Q Consensus 994 ag~gVaMg 1001 (1054)
+|.|||+.
T Consensus 214 ag~~va~~ 221 (221)
T TIGR02463 214 ADYAVVIK 221 (221)
T ss_pred CCceEEeC
Confidence 99999973
No 109
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.84 E-value=9.3e-19 Score=204.02 Aligned_cols=264 Identities=14% Similarity=0.086 Sum_probs=183.3
Q ss_pred CcceEEEEcCCC-chHHHHHHH-----ccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccC
Q 001557 305 IWPVAIHGHYAD-AGDAAALLS-----GALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDAS 378 (1054)
Q Consensus 305 ~~pDVIh~h~~~-a~~~a~~l~-----~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~a 378 (1054)
.+||+||++.+. .+..+..++ ...++|++.++++++... ..+..+.+
T Consensus 99 ~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~---------------------------~~w~~~~~ 151 (382)
T PLN02605 99 YKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH---------------------------PTWFHKGV 151 (382)
T ss_pred cCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC---------------------------cccccCCC
Confidence 569999997642 222222222 235899998888763110 01246789
Q ss_pred CEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCC
Q 001557 379 EIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASP 458 (1054)
Q Consensus 379 d~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~ 458 (1054)
|.++++|+...+.+... +.. .+++.+++++++.+.+.+.
T Consensus 152 d~~~~~s~~~~~~l~~~--g~~---------------------~~ki~v~g~~v~~~f~~~~------------------ 190 (382)
T PLN02605 152 TRCFCPSEEVAKRALKR--GLE---------------------PSQIRVYGLPIRPSFARAV------------------ 190 (382)
T ss_pred CEEEECCHHHHHHHHHc--CCC---------------------HHHEEEECcccCHhhccCC------------------
Confidence 99999998776654332 122 2389999999986543321
Q ss_pred CCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc----cCCCcEEEEEecCCCchhhhhchHHHHHHHH
Q 001557 459 DPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPL----RELANLTLIMGNRDDIDEMSGTNAALLLSIL 534 (1054)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~----~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~ 534 (1054)
......+.++..++++++|+++|+....|++..+++++..+... .+...+.+++|.++. ...++.
T Consensus 191 -~~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~----------~~~~L~ 259 (382)
T PLN02605 191 -RPKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK----------LQSKLE 259 (382)
T ss_pred -CCHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH----------HHHHHH
Confidence 11122345566677899999999999999999999999765310 122234346665421 122232
Q ss_pred HHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccc------cCcccceee
Q 001557 535 KLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN------GGPVDIHRV 608 (1054)
Q Consensus 535 ~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~------Gg~~eiv~~ 608 (1054)
+. .....|.|+|++ ++++++|++| |++|.++ .|+++.||||||+|||+++. |+...++ +
T Consensus 260 ~~----~~~~~v~~~G~~--~~~~~l~~aa----Dv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~-~ 324 (382)
T PLN02605 260 SR----DWKIPVKVRGFV--TNMEEWMGAC----DCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNVPYVV-D 324 (382)
T ss_pred hh----cccCCeEEEecc--ccHHHHHHhC----CEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhHHHHH-h
Confidence 22 223468999997 4899999999 9999865 48899999999999999984 4443344 4
Q ss_pred CCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 001557 609 LDNGLLVDPHDQQSIADALLKLVSD-KQLWERCRQNGLKNIHQFSWPEHCKSYLSRI 664 (1054)
Q Consensus 609 ~~~Gllv~p~d~~~la~aI~~ll~d-~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l 664 (1054)
.+.|+++ .|+++++++|.+++.+ ++.+++|++++++.....+++.+++.+.+..
T Consensus 325 ~g~g~~~--~~~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~~ 379 (382)
T PLN02605 325 NGFGAFS--ESPKEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIVHDLHELV 379 (382)
T ss_pred CCceeec--CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHh
Confidence 5567665 6999999999999998 9999999999999888888888887776554
No 110
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.83 E-value=9.3e-19 Score=204.51 Aligned_cols=267 Identities=14% Similarity=0.139 Sum_probs=180.1
Q ss_pred CcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEec
Q 001557 305 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 384 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~ 384 (1054)
.+||+||++.+.........++.+++|++...++..... + +..+.+|.+++.
T Consensus 103 ~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~~----------------------~------w~~~~~d~~~v~ 154 (391)
T PRK13608 103 EKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLHK----------------------N------WITPYSTRYYVA 154 (391)
T ss_pred hCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCccc----------------------c------cccCCCCEEEEC
Confidence 579999998654432222334557899876555531110 1 236789999999
Q ss_pred CHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhH
Q 001557 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS 464 (1054)
Q Consensus 385 S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1054)
|+...+.+... +..+ .++.+++++++.. |.+.. ....
T Consensus 155 s~~~~~~l~~~--gi~~---------------------~ki~v~GiPv~~~-f~~~~-------------------~~~~ 191 (391)
T PRK13608 155 TKETKQDFIDV--GIDP---------------------STVKVTGIPIDNK-FETPI-------------------DQKQ 191 (391)
T ss_pred CHHHHHHHHHc--CCCH---------------------HHEEEECeecChH-hcccc-------------------cHHH
Confidence 98877665331 2222 2788887777633 32110 0112
Q ss_pred HHhhhcCCCCCcE-EEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCC
Q 001557 465 EIMHFFSNPRKPM-ILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLY 543 (1054)
Q Consensus 465 ~~~~~~~~~~~~~-Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~ 543 (1054)
.+.++..++++++ +++.|++...||+..+++++... .+...+.+++|..+. ...++. +.++..
T Consensus 192 ~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~~~~---~~~~~~vvv~G~~~~----------l~~~l~---~~~~~~ 255 (391)
T PRK13608 192 WLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDILAK---SANAQVVMICGKSKE----------LKRSLT---AKFKSN 255 (391)
T ss_pred HHHHcCCCCCCCEEEEECCCcccchhHHHHHHHHHhc---CCCceEEEEcCCCHH----------HHHHHH---HHhccC
Confidence 2334444556665 55789999999999999986332 222344334453321 122233 233344
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccc-cCccc-----ceeeCCceEEeCC
Q 001557 544 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN-GGPVD-----IHRVLDNGLLVDP 617 (1054)
Q Consensus 544 ~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~-Gg~~e-----iv~~~~~Gllv~p 617 (1054)
++|.+.|+. ++++.+|+.| |++|. .+.|+++.||||||+|+|+++. +| .| ++.+.+.|+++
T Consensus 256 ~~v~~~G~~--~~~~~~~~~a----Dl~I~----k~gg~tl~EA~a~G~PvI~~~~~pg-qe~~N~~~~~~~G~g~~~-- 322 (391)
T PRK13608 256 ENVLILGYT--KHMNEWMASS----QLMIT----KPGGITISEGLARCIPMIFLNPAPG-QELENALYFEEKGFGKIA-- 322 (391)
T ss_pred CCeEEEecc--chHHHHHHhh----hEEEe----CCchHHHHHHHHhCCCEEECCCCCC-cchhHHHHHHhCCcEEEe--
Confidence 679999986 6899999999 99996 4579999999999999999964 33 23 22344455554
Q ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhcC
Q 001557 618 HDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQRQ 671 (1054)
Q Consensus 618 ~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~~~~~ 671 (1054)
.|+++++++|.++++|++.+++|++++++..+.|+++..++.+++.+..+.+.+
T Consensus 323 ~~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~~ 376 (391)
T PRK13608 323 DTPEEAIKIVASLTNGNEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQPQ 376 (391)
T ss_pred CCHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhhh
Confidence 599999999999999999999999999998888999999999999998765544
No 111
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.83 E-value=6.6e-20 Score=194.67 Aligned_cols=193 Identities=16% Similarity=0.196 Sum_probs=130.1
Q ss_pred EEEEEecCCC---C-hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcCC
Q 001557 771 VFVIAADCDT---T-SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPS 846 (1054)
Q Consensus 771 Liv~DiDGTL---~-~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~~ 846 (1054)
||++|+|||| . ..+++.++++|++|+++ |+.|+|+|||++..+.++++.++ +++||+||+.|++++
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~l~~~----g~~~~i~TGR~~~~~~~~~~~~~------~~~i~~nGa~i~~~~ 70 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALERLREA----GVKVVLVTGRSLAEIKELLKQLP------LPLIAENGALIFYPG 70 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHhCC------CCEEECCCcEEEECC
Confidence 5899999999 2 46999999999999997 79999999999999999999843 469999999999754
Q ss_pred CCCCCCCCCccccCccchhhhccccChhhHHHHH---HHhhhhccCCCCccCcccccccccCcceEEEEEecCCC-CCcc
Q 001557 847 SSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTL---VRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQ-MIPP 922 (1054)
Q Consensus 847 ~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~~~-~~~~ 922 (1054)
. . .|.. ..+.....+ .++........ .............+++|++.... ....
T Consensus 71 ~---------~----~~~~------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 127 (204)
T TIGR01484 71 E---------I----LYIE------PSDVFEEILGIKEEIGAELKSLS----EHYVGTFIEDKAIAVAIHYVGAELGQEL 127 (204)
T ss_pred E---------E----EEEc------ccccHHHHHHhhhhcCceeeeec----cccccceeecccceeeEEEeccchhhHH
Confidence 1 1 1110 001111111 01000000000 00000001123455666654321 1112
Q ss_pred HHHHHHHHHHhc---CeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEE
Q 001557 923 VKELRKLMRIQA---LRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVI 999 (1054)
Q Consensus 923 ~~el~~~l~~~~---~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVa 999 (1054)
..++...+.... ..++++++++. ++||+|++++|+.|++++++++|++++++++ +||+.| | ++||+.+|.+||
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~s~~~-~~ev~p~~~~K~~~~~~~~~~~~~~~~~~~~-~GD~~n-D-~~~~~~~~~~va 203 (204)
T TIGR01484 128 DSKMRERLEKIGRNDLELEAIYVGKT-DLEVLPAGVDKGSALQALLKELNGKRDEILA-FGDSGN-D-EEMFEVAGLAVA 203 (204)
T ss_pred HHHHHHHHHhhccccCcEEEEEecCC-EEEEecCCCChHHHHHHHHHHhCCCHHHEEE-EcCCHH-H-HHHHHHcCCceE
Confidence 234444444432 34777767775 9999999999999999999999999999988 888888 8 999999999999
Q ss_pred e
Q 001557 1000 L 1000 (1054)
Q Consensus 1000 M 1000 (1054)
|
T Consensus 204 m 204 (204)
T TIGR01484 204 V 204 (204)
T ss_pred C
Confidence 8
No 112
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.82 E-value=3.7e-20 Score=190.51 Aligned_cols=162 Identities=31% Similarity=0.520 Sum_probs=141.6
Q ss_pred cCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEe
Q 001557 470 FSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAY 548 (1054)
Q Consensus 470 ~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~ 548 (1054)
....++++|+++||+++.||+..+++|+..+... ..+++.+ |+|.++. ...+..++..+++..++.|
T Consensus 10 ~~~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~-~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~i~~ 77 (172)
T PF00534_consen 10 KIPDKKKIILFIGRLDPEKGIDLLIEAFKKLKEK-KNPNYKLVIVGDGEY-----------KKELKNLIEKLNLKENIIF 77 (172)
T ss_dssp TT-TTSEEEEEESESSGGGTHHHHHHHHHHHHHH-HHTTEEEEEESHCCH-----------HHHHHHHHHHTTCGTTEEE
T ss_pred CCCCCCeEEEEEecCccccCHHHHHHHHHHHHhh-cCCCeEEEEEccccc-----------ccccccccccccccccccc
Confidence 3357789999999999999999999999998642 2345555 7785542 4567788899999899999
Q ss_pred CCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHH
Q 001557 549 PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALL 628 (1054)
Q Consensus 549 ~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~ 628 (1054)
++..+.+++..+|+.| |++|+||..|+||++++|||+||+|||+++.|+..|++.++.+|+++++.|+++++++|.
T Consensus 78 ~~~~~~~~l~~~~~~~----di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~ 153 (172)
T PF00534_consen 78 LGYVPDDELDELYKSS----DIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIE 153 (172)
T ss_dssp EESHSHHHHHHHHHHT----SEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHH
T ss_pred cccccccccccccccc----eeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHH
Confidence 9999888999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCHHHHHHHHHHHHHH
Q 001557 629 KLVSDKQLWERCRQNGLKN 647 (1054)
Q Consensus 629 ~ll~d~~~~~~~~~~~~~~ 647 (1054)
+++.+++.++.|+++++++
T Consensus 154 ~~l~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 154 KLLNDPELRQKLGKNARER 172 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCHHHHHHHHHHhcCC
Confidence 9999999999999999874
No 113
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.78 E-value=2.1e-16 Score=169.03 Aligned_cols=389 Identities=19% Similarity=0.289 Sum_probs=254.9
Q ss_pred CcHhHHHHHHHHHHhcC-CCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCcccc
Q 001557 191 GGQVKYVVELARALGSM-PGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQ 269 (1054)
Q Consensus 191 GG~~~~v~eLa~aLa~~-~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~ 269 (1054)
||.++....-.+.+.+. |. +...|.|..++ + .|.+.+.... ..| +--.+++++.++.+.. +++-
T Consensus 57 GGGErVLW~Avr~~q~k~~n-~~~viYsGD~n---~-----t~~~IL~k~k-~~F-~idlDs~nI~Fi~Lk~----R~lV 121 (465)
T KOG1387|consen 57 GGGERVLWKAVRITQRKFPN-NVIVIYSGDFN---V-----TPENILNKVK-NKF-DIDLDSDNIFFIYLKL----RYLV 121 (465)
T ss_pred CCcceehhHHHHHHHHhCCC-ceEEEEeCCCC---C-----CHHHHHHHHH-Hhc-CceecccceEEEEEEe----eeee
Confidence 67777766666665544 65 45555655431 1 1111121100 000 1112456788887765 5666
Q ss_pred cccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcC-CCchHHHHHHHccCCCCEEEEeCCCcc--chHHH
Q 001557 270 KELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHY-ADAGDAAALLSGALNVPMVFTGHSLGR--DKLEQ 346 (1054)
Q Consensus 270 k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~-~~a~~~a~~l~~~~~iP~V~t~H~l~~--~~~~~ 346 (1054)
....|++..-+-..+-..+. .+...+. +.|||..-.. .+..+.+ +++..++|++..+|-.-- +-+..
T Consensus 122 ea~~~~hfTllgQaigsmIl----~~Eai~r----~~Pdi~IDtMGY~fs~p~--~r~l~~~~V~aYvHYP~iS~DML~~ 191 (465)
T KOG1387|consen 122 EASTWKHFTLLGQAIGSMIL----AFEAIIR----FPPDIFIDTMGYPFSYPI--FRRLRRIPVVAYVHYPTISTDMLKK 191 (465)
T ss_pred ecccccceehHHHHHHHHHH----HHHHHHh----CCchheEecCCCcchhHH--HHHHccCceEEEEecccccHHHHHH
Confidence 66778775433222222222 2222211 5699887553 2222222 223458999999995322 11222
Q ss_pred HH---HhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCC
Q 001557 347 LL---KQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMP 423 (1054)
Q Consensus 347 l~---~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~ 423 (1054)
+. ..|.+.+..+. .|+++.++ -..+-.+||.|.+.|......+..+++.+
T Consensus 192 l~qrq~s~~l~~~Kla-Y~rlFa~l--Y~~~G~~ad~vm~NssWT~nHI~qiW~~~------------------------ 244 (465)
T KOG1387|consen 192 LFQRQKSGILVWGKLA-YWRLFALL--YQSAGSKADIVMTNSSWTNNHIKQIWQSN------------------------ 244 (465)
T ss_pred HHhhhhcchhhhHHHH-HHHHHHHH--HHhccccceEEEecchhhHHHHHHHhhcc------------------------
Confidence 21 12222222111 23333332 34567789999998876666665555432
Q ss_pred cEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc
Q 001557 424 RMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPL 503 (1054)
Q Consensus 424 rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~ 503 (1054)
.+.++.|..+.+........ ...+.+.+|++|.+.|.||.. +|+.+.....+
T Consensus 245 ~~~iVyPPC~~e~lks~~~t---------------------------e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~ 296 (465)
T KOG1387|consen 245 TCSIVYPPCSTEDLKSKFGT---------------------------EGERENQLLSLAQFRPEKNHK-ILQLFALYLKN 296 (465)
T ss_pred ceeEEcCCCCHHHHHHHhcc---------------------------cCCcceEEEEEeecCcccccH-HHHHHHHHHhc
Confidence 56667776776644321100 024568899999999999999 55555444334
Q ss_pred cCC----CcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCC
Q 001557 504 REL----ANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIE 578 (1054)
Q Consensus 504 ~~~----~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~E 578 (1054)
.+. +++.| ++|+-... +..+.+..++.++..+++..+|.|...+|.+++..+|..| .+.|++-..|
T Consensus 297 ~pl~a~~~~iKL~ivGScRne-----eD~ervk~Lkd~a~~L~i~~~v~F~~N~Py~~lv~lL~~a----~iGvh~MwNE 367 (465)
T KOG1387|consen 297 EPLEASVSPIKLIIVGSCRNE-----EDEERVKSLKDLAEELKIPKHVQFEKNVPYEKLVELLGKA----TIGVHTMWNE 367 (465)
T ss_pred CchhhccCCceEEEEeccCCh-----hhHHHHHHHHHHHHhcCCccceEEEecCCHHHHHHHhccc----eeehhhhhhh
Confidence 454 45665 55664432 3356789999999999999999999999999999999999 8999999999
Q ss_pred CCcHHHHHHHHcCCCEEEccccCcc-cceeeC---CceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHhcCCH
Q 001557 579 PFGLTLIEAAAYGLPIVATKNGGPV-DIHRVL---DNGLLVDPHDQQSIADALLKLVS-DKQLWERCRQNGLKNIHQFSW 653 (1054)
Q Consensus 579 gfgl~l~EAmA~G~PVIat~~Gg~~-eiv~~~---~~Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v~~fsw 653 (1054)
-||+.+.||||+|+-+|+-+.||+. |||... .+|++.. +.++.|+++.+++. +++++..++++++..+.+|+-
T Consensus 368 HFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~--t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE 445 (465)
T KOG1387|consen 368 HFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP--TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGE 445 (465)
T ss_pred hcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC--ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhH
Confidence 9999999999999999999988876 777643 3699985 78899999999998 777788999999999999999
Q ss_pred HHHHHHHHHHHHHhhhc
Q 001557 654 PEHCKSYLSRISSCKQR 670 (1054)
Q Consensus 654 ~~~a~~yl~~l~~~~~~ 670 (1054)
....+.|...+..+++.
T Consensus 446 ~~F~kd~~~~i~kll~e 462 (465)
T KOG1387|consen 446 LKFDKDWENPICKLLEE 462 (465)
T ss_pred HHHHHhHhHHHHHhhcc
Confidence 99999999888877653
No 114
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.78 E-value=1.1e-18 Score=187.50 Aligned_cols=209 Identities=13% Similarity=0.014 Sum_probs=127.0
Q ss_pred EEEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcCCCC
Q 001557 771 VFVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSSS 848 (1054)
Q Consensus 771 Liv~DiDGTL--~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~~~~ 848 (1054)
+|++|+|||| ...+++.++++|++++++ |+.|++||||++..+..+++++++. +++||+||+.|+.+...
T Consensus 1 li~~DlDGTLl~~~~~~~~~~~ai~~l~~~----G~~~vi~TgR~~~~~~~~~~~lg~~----~~~I~~NGa~I~~~~~~ 72 (225)
T TIGR02461 1 VIFTDLDGTLLPPGYEPGPAREALEELKDL----GFPIVFVSSKTRAEQEYYREELGVE----PPFIVENGGAIFIPRGY 72 (225)
T ss_pred CEEEeCCCCCcCCCCCchHHHHHHHHHHHC----CCEEEEEeCCCHHHHHHHHHHcCCC----CcEEEcCCcEEEecCcc
Confidence 5899999999 355777899999999997 9999999999999999999999983 57999999999986421
Q ss_pred CCCCCCCccccCccchhhhccccChhhHHHHHHHhhh-hccCCCC-ccC----------cccccccccCcceEEEEEecC
Q 001557 849 TEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAA-SVNDKKG-EEG----------KIVEEDESRSTIHCYAFEVTN 916 (1054)
Q Consensus 849 ~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~-~~~~~~~-~~~----------~~v~~~~~~~~~~kis~~~~~ 916 (1054)
........-. +..+ ..+...+..+.+++++..... ....... ... .............|+.+. .+
T Consensus 73 ~~~~~~~~~~-~~~~-~i~~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~-~~ 149 (225)
T TIGR02461 73 FPFPVGAGRE-VGNY-EVIELGKPVAKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETIFL-WS 149 (225)
T ss_pred cccccccccc-CCCe-EEEEcCCCHHHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcccC-CC
Confidence 0000000000 0000 001223334444333322221 0000000 000 000000000112233222 22
Q ss_pred CCCCccHHHHHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCC--CccCEEEEeCcCCCccccccccCc
Q 001557 917 PQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGI--DLSNVVVIAGECGDTDYEGLLGGV 994 (1054)
Q Consensus 917 ~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI--~~e~vvaf~GD~~d~D~~eML~~a 994 (1054)
+ ..+.++.+.+.. ..+++..+.. ++++ +.++|||.|++.|++.+++ +.+++++ +||+.| | ++||+.+
T Consensus 150 ~---e~~~~~~~~~~~--~~~~~~~s~~--~~~i-~~~~sK~~al~~l~~~~~~~~~~~~~i~-~GD~~n-D-~~ml~~a 218 (225)
T TIGR02461 150 R---EGWEAILVTARA--RGLKYTHGGR--FYTV-HGGSDKGKAIKRLLDLYKLRPGAIESVG-LGDSEN-D-FPMFEVV 218 (225)
T ss_pred H---HHHHHHHHHHHH--cCCcEEECCE--EEEE-CCCCCHHHHHHHHHHHhccccCcccEEE-EcCCHH-H-HHHHHhC
Confidence 2 234555556633 3345555443 5675 5599999999999999987 5668888 888988 8 9999999
Q ss_pred ceEEEec
Q 001557 995 HKTVILK 1001 (1054)
Q Consensus 995 g~gVaMg 1001 (1054)
|+||++|
T Consensus 219 g~~v~v~ 225 (225)
T TIGR02461 219 DLAFLVG 225 (225)
T ss_pred CCcEecC
Confidence 9999986
No 115
>PLN02580 trehalose-phosphatase
Probab=99.76 E-value=5.3e-18 Score=191.82 Aligned_cols=207 Identities=12% Similarity=0.153 Sum_probs=134.0
Q ss_pred CCCEEEEEEecCCC--------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcC
Q 001557 767 RRKYVFVIAADCDT--------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNS 838 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL--------~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~n 838 (1054)
.++.+||+|+|||| ...+++.++++|++|.+. ..++|.|||+...+.+++.-.++ +++++|
T Consensus 117 ~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~-----~~VAIVSGR~~~~L~~~l~~~~l------~laGsH 185 (384)
T PLN02580 117 GKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY-----FPTAIISGRSRDKVYELVGLTEL------YYAGSH 185 (384)
T ss_pred cCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC-----CCEEEEeCCCHHHHHHHhCCCCc------cEEEeC
Confidence 45689999999999 256899999999999975 36999999999999999976665 699999
Q ss_pred CcEEEcCCCCCCC-CCC-CccccCc---cchh-hhccccChh--hH----HHHHHHhhhhccCCCCccCcccccccccCc
Q 001557 839 GSELYYPSSSTED-NHG-LPFLVDL---DYRF-HTEYRWGGE--GL----RKTLVRWAASVNDKKGEEGKIVEEDESRST 906 (1054)
Q Consensus 839 Ga~I~~~~~~~~~-~~~-~~~~~d~---~~~~-~i~~~w~~e--~l----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 906 (1054)
|.++..+.+.... .+. .....|. .|.. .....|... .+ .+...+.++...+.|
T Consensus 186 G~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K--------------- 250 (384)
T PLN02580 186 GMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENH--------------- 250 (384)
T ss_pred CceeecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEec---------------
Confidence 9999765321100 000 0000011 1110 001122211 11 112223344444333
Q ss_pred ceEEEEEecCCCCC--c-cHHHHHHHHHHhcCeEEEEEeeCCeEEEEec-CCCCHHHHHHHHHHHhCCCccC-E-EEEeC
Q 001557 907 IHCYAFEVTNPQMI--P-PVKELRKLMRIQALRCHVIYCQNGTKLHVIP-VLASRSQALRYLHVRWGIDLSN-V-VVIAG 980 (1054)
Q Consensus 907 ~~kis~~~~~~~~~--~-~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p-~~asKg~AL~~L~~~~gI~~e~-v-vaf~G 980 (1054)
.+++++|++..+.. . ..++++..+... ..+.+ .++.+++||.| .++|||.|+++|++++|++..+ + .+|+|
T Consensus 251 ~~svavHYR~a~~~~~~~~~~~l~~~l~~~-~~l~v--~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iG 327 (384)
T PLN02580 251 KFCVSVHYRNVDEKNWPLVAQCVHDVLKKY-PRLRL--THGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIG 327 (384)
T ss_pred CcEEEEEeCCCCchHHHHHHHHHHHHHHhC-CceEE--EeCCeEEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEEC
Confidence 68899999765421 1 112233333221 22443 34445999999 5999999999999999998774 3 36689
Q ss_pred cCCCccccccccC-----cceEEEecCcc
Q 001557 981 ECGDTDYEGLLGG-----VHKTVILKGVG 1004 (1054)
Q Consensus 981 D~~d~D~~eML~~-----ag~gVaMgNa~ 1004 (1054)
|+.| | ++||+. .|.||+|+|+.
T Consensus 328 DD~T-D-edmF~~L~~~~~G~~I~Vgn~~ 354 (384)
T PLN02580 328 DDRT-D-EDAFKVLREGNRGYGILVSSVP 354 (384)
T ss_pred CCch-H-HHHHHhhhccCCceEEEEecCC
Confidence 9888 8 999996 58999999876
No 116
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.75 E-value=8.5e-17 Score=171.19 Aligned_cols=119 Identities=31% Similarity=0.460 Sum_probs=97.2
Q ss_pred EEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCC-CcH
Q 001557 480 ALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQ-SDV 557 (1054)
Q Consensus 480 ~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~-~dl 557 (1054)
++|++.+.||++.+++|+..+.+.. +++.+ ++|.+.+. ......+.+++...+|.+.++++. +++
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~--~~~~~~i~G~~~~~-----------~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 175 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERG--PDLKLVIAGDGPER-----------EYLEELLAALLLLDRVIFLGGLDPEELL 175 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhC--CCeEEEEEeCCCCh-----------HHHHHHHHhcCCcccEEEeCCCCcHHHH
Confidence 8999999999999999999996433 45565 67777652 222333567777889999999855 455
Q ss_pred HHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEe
Q 001557 558 PDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLV 615 (1054)
Q Consensus 558 ~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv 615 (1054)
..+++.| |++++|+..|++|++++|||+||+|||+|+.++..|++.++.+|++|
T Consensus 176 ~~~~~~~----di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 176 ALLLAAA----DVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHhhcC----CEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 5555558 99999999999999999999999999999999999999888899875
No 117
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=99.75 E-value=2.3e-17 Score=180.07 Aligned_cols=195 Identities=13% Similarity=0.072 Sum_probs=125.8
Q ss_pred CCEEEEEEecCCCC--------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCC
Q 001557 768 RKYVFVIAADCDTT--------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSG 839 (1054)
Q Consensus 768 ~kkLiv~DiDGTL~--------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nG 839 (1054)
++++|++|+||||. ..+++.++++|++|.+. +++.|+|+|||++.++...+.-.++ +++++||
T Consensus 2 ~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~---~~~~v~ivSGR~~~~~~~~~~~~~~------~l~g~hG 72 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAAR---PHNAIWIISGRKFLEKWLGVKLPGL------GLAGEHG 72 (244)
T ss_pred CcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhC---CCCeEEEEECCChhhccccCCCCce------eEEeecC
Confidence 56999999999992 34679999999999987 7788999999988776544321122 5999999
Q ss_pred cEEEcCCCCCCCCCCCccccCccchhh--hccccCh--hhHHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEec
Q 001557 840 SELYYPSSSTEDNHGLPFLVDLDYRFH--TEYRWGG--EGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVT 915 (1054)
Q Consensus 840 a~I~~~~~~~~~~~~~~~~~d~~~~~~--i~~~w~~--e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~ 915 (1054)
++++..+.. ..|... ....|.. ..+.++....+++..+.+ .++++|+++
T Consensus 73 ~~~~~~g~~------------~~~~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K---------------~~s~~~hyr 125 (244)
T TIGR00685 73 CEMKDNGSC------------QDWVNLTEKIPSWKVRANELREEITTRPGVFIERK---------------GVALAWHYR 125 (244)
T ss_pred EEEecCCCc------------ceeeechhhhhhHHHHHHHHHHHHhcCCCcEEEec---------------ceEEEEEec
Confidence 999863310 011110 0012321 112222222244433332 567888886
Q ss_pred CC-CCCccHHHHHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCc
Q 001557 916 NP-QMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGV 994 (1054)
Q Consensus 916 ~~-~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~a 994 (1054)
.. +......++.+.+........+....+..++|+.|.++|||.|++.++++++++.+++++ +||+.| | ++||+.+
T Consensus 126 ~a~d~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~-iGD~~~-D-~~~~~~~ 202 (244)
T TIGR00685 126 QAPVPELARFRAKELKEKILSFTDLEVMDGKAVVELKPRFVNKGEIVKRLLWHQPGSGISPVY-LGDDIT-D-EDAFRVV 202 (244)
T ss_pred cCCCcHHHHHHHHHHHHHHhcCCCEEEEECCeEEEEeeCCCCHHHHHHHHHHhcccCCCceEE-EcCCCc-H-HHHHHHH
Confidence 54 211122222333322111112233344458999999999999999999999999888877 888888 8 9999988
Q ss_pred --------ceEEEec
Q 001557 995 --------HKTVILK 1001 (1054)
Q Consensus 995 --------g~gVaMg 1001 (1054)
+.+|.|+
T Consensus 203 ~~~~~~~g~~~v~v~ 217 (244)
T TIGR00685 203 NNQWGNYGFYPVPIG 217 (244)
T ss_pred hcccCCCCeEEEEEe
Confidence 5888885
No 118
>PLN02423 phosphomannomutase
Probab=99.75 E-value=2.3e-17 Score=179.76 Aligned_cols=208 Identities=12% Similarity=0.093 Sum_probs=124.6
Q ss_pred cCCCEEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEE
Q 001557 766 RRRKYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSEL 842 (1054)
Q Consensus 766 ~~~kkLiv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I 842 (1054)
|..+.++++|+|||| ++.+++.++++|+++++ + +.|++||||++..+.+.+..... .+++++||+||+.|
T Consensus 4 ~~~~~i~~~D~DGTLl~~~~~i~~~~~~ai~~l~~----~-i~fviaTGR~~~~~~~~~~~~~~--~~~~~~I~~NGa~i 76 (245)
T PLN02423 4 RKPGVIALFDVDGTLTAPRKEATPEMLEFMKELRK----V-VTVGVVGGSDLSKISEQLGKTVI--NDYDYVFSENGLVA 76 (245)
T ss_pred CccceEEEEeccCCCcCCCCcCCHHHHHHHHHHHh----C-CEEEEECCcCHHHHHHHhccccc--ccCCEEEECCceEE
Confidence 344567779999999 47799999999999994 3 99999999999988777765411 12357999999999
Q ss_pred EcCCCCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhc--cCCCCccCcccccccccCcceEEEEEecCC---
Q 001557 843 YYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASV--NDKKGEEGKIVEEDESRSTIHCYAFEVTNP--- 917 (1054)
Q Consensus 843 ~~~~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~kis~~~~~~--- 917 (1054)
+..+ +.+ +...+......+.+++++....... .......... .+........+ +...+.
T Consensus 77 ~~~g---------~~i----~~~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~~~-ie~~~~i~~~~--~~~~~~~~~ 140 (245)
T PLN02423 77 HKDG---------KLI----GTQSLKSFLGEDKLKEFINFTLHYIADLDIPIKRGTF-IEFRSGMLNVS--PIGRNCSQE 140 (245)
T ss_pred EeCC---------EEE----EEecccccCCHHHHHHHHHHHHHHHHHcCCccccCCe-EEccCCccccC--cccccCCHh
Confidence 8543 111 1111212223333333332211100 0000000000 11000000000 000000
Q ss_pred -----C----CCccHHHHHHHHHHhcCeEEEEEeeCC-eEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCc----CC
Q 001557 918 -----Q----MIPPVKELRKLMRIQALRCHVIYCQNG-TKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGE----CG 983 (1054)
Q Consensus 918 -----~----~~~~~~el~~~l~~~~~~~~v~~s~~~-~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD----~~ 983 (1054)
. ......++.+.+......+.+..+.++ +++||+|+|+|||.||+.|+ +++++|| ||| ++
T Consensus 141 ~~~~~~~i~~i~~~~~~~~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~-----~~~e~~a-FGD~~~~~~ 214 (245)
T PLN02423 141 ERDEFEKYDKVHNIRPKMVSVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE-----DFDEIHF-FGDKTYEGG 214 (245)
T ss_pred HHhhHHhhCccchHHHHHHHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc-----CcCeEEE-EeccCCCCC
Confidence 0 011234555556555445667666653 59999999999999999999 8999999 777 67
Q ss_pred CccccccccC-cceEEEecCcc
Q 001557 984 DTDYEGLLGG-VHKTVILKGVG 1004 (1054)
Q Consensus 984 d~D~~eML~~-ag~gVaMgNa~ 1004 (1054)
| | ++||+. .-.++.+.+=.
T Consensus 215 N-D-~eMl~~~~~~~~~~~~~~ 234 (245)
T PLN02423 215 N-D-HEIFESERTIGHTVTSPD 234 (245)
T ss_pred C-c-HHHHhCCCcceEEeCCHH
Confidence 8 8 999996 55677776533
No 119
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.75 E-value=8.1e-16 Score=172.34 Aligned_cols=289 Identities=26% Similarity=0.300 Sum_probs=206.1
Q ss_pred ceEEEEcCCCch---HHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEe
Q 001557 307 PVAIHGHYADAG---DAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 383 (1054)
Q Consensus 307 pDVIh~h~~~a~---~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~ 383 (1054)
+|++|.+..... ..........+.+.+...|........... . ........+.+ ... ........+.+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~-~~~--~~~~~~~~~~~~~ 156 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPR--L--LLLLGLLRLLL-KRL--KKALRLLADRVIA 156 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCccccccccc--c--hhhHHHHHHHH-HHH--HHhccccccEEEE
Confidence 589998875332 235555667789999999987553211000 0 00000000000 110 1111224788888
Q ss_pred cCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchh
Q 001557 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIW 463 (1054)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1054)
.+..........+.. .++.++|++++...+.+....
T Consensus 157 ~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~-------------------- 192 (381)
T COG0438 157 VSPALKELLEALGVP------------------------NKIVVIPNGIDTEKFAPARIG-------------------- 192 (381)
T ss_pred CCHHHHHHHHHhCCC------------------------CCceEecCCcCHHHcCccccC--------------------
Confidence 887653322111111 168899999999887642100
Q ss_pred HHHhhhcCCCC--CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCchhhhhchHHHHHHHHHHHHHc
Q 001557 464 SEIMHFFSNPR--KPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEMSGTNAALLLSILKLIDKY 540 (1054)
Q Consensus 464 ~~~~~~~~~~~--~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~-LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~ 540 (1054)
..++ .+.++++||+.+.||+..+++++..+....+. +. +++|.++.. ...+..++..+
T Consensus 193 -------~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~--~~~~~~g~~~~~----------~~~~~~~~~~~ 253 (381)
T COG0438 193 -------LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD--IKLVIVGDGPER----------REELEKLAKKL 253 (381)
T ss_pred -------CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC--eEEEEEcCCCcc----------HHHHHHHHHHh
Confidence 0122 47899999999999999999999999643222 44 477877653 13344477777
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCH
Q 001557 541 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ 620 (1054)
Q Consensus 541 ~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~ 620 (1054)
...+.+.|+|.++.+++..+|+.| |++++|+..|+||++++|||++|+|||+++.++..+++.++.+|+++.+.+.
T Consensus 254 ~~~~~v~~~g~~~~~~~~~~~~~~----~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~ 329 (381)
T COG0438 254 GLEDNVKFLGYVPDEELAELLASA----DVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDV 329 (381)
T ss_pred CCCCcEEEecccCHHHHHHHHHhC----CEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCH
Confidence 777889999999888899999999 9999999889999999999999999999999999999988767888887789
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHhhh
Q 001557 621 QSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISSCKQ 669 (1054)
Q Consensus 621 ~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~~~~~ 669 (1054)
+++++++..++++++.++.+.+.+++.+ +.|+|+..++.+.+.+..+..
T Consensus 330 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (381)
T COG0438 330 EELADALEQLLEDPELREELGEAARERVEEEFSWERIAEQLLELYEELLA 379 (381)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 9999999999999887888888777777 699999999999999887653
No 120
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.74 E-value=8.9e-17 Score=194.04 Aligned_cols=335 Identities=16% Similarity=0.186 Sum_probs=221.5
Q ss_pred CcceEEEEcCCCchHHHHHHHcc--------------CCCCEEEEeCCCccchHHHH----HH---------hCCCChhh
Q 001557 305 IWPVAIHGHYADAGDAAALLSGA--------------LNVPMVFTGHSLGRDKLEQL----LK---------QGRLSRDE 357 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~--------------~~iP~V~t~H~l~~~~~~~l----~~---------~g~~~~~~ 357 (1054)
.+|||||+|.|.++++...+.+. ....+|||.|++.++..+.+ +. .| ++...
T Consensus 160 ~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~~~g-l~~~~ 238 (601)
T TIGR02094 160 IDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAANLG-LPREQ 238 (601)
T ss_pred CCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhhHhC-CCHHH
Confidence 47999999999988887774221 14678999999866554211 11 01 11111
Q ss_pred hhhHhHHH----HHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCc
Q 001557 358 INTTYKIM----RRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIE 433 (1054)
Q Consensus 358 i~~~~~~~----~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID 433 (1054)
+....... ..+..-+.++..|+.|.++|+.+.+-..+++..+.+.. ..+ ..++.-|-||||
T Consensus 239 ~~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l~~~~----~~~-----------~~~i~gItNGId 303 (601)
T TIGR02094 239 LLALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFLYPGY----EEE-----------EVPIGYVTNGVH 303 (601)
T ss_pred HHhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhhhhhc----ccc-----------cCCccceeCCcc
Confidence 10000000 11333466899999999999987763333222211100 000 115788999999
Q ss_pred CCCcccCCCCCCCcccccCCCC---------------CCCCCchhH-------HHhh-----------------------
Q 001557 434 FHHIVRHNGDVDGEVERDEGSP---------------ASPDPPIWS-------EIMH----------------------- 468 (1054)
Q Consensus 434 ~~~f~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~-------~~~~----------------------- 468 (1054)
...+.|..... ...++.... .......|+ .+.+
T Consensus 304 ~~~W~~~~~~~--l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~ 381 (601)
T TIGR02094 304 NPTWVAPELRD--LYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMAT 381 (601)
T ss_pred ccccCCHHHHH--HHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhh
Confidence 99988532100 000000000 000000110 1111
Q ss_pred -hcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc--cCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCC
Q 001557 469 -FFSNPRKPMILALARPDPKKNITTLVKAFGECRPL--RELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYG 544 (1054)
Q Consensus 469 -~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~--~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~ 544 (1054)
...+++.++|++++|+...||+++++.++.++.+. .+...+++ ++|.+...+.+ ..++...+..+..+....+
T Consensus 382 gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~---gk~~i~~i~~la~~~~~~~ 458 (601)
T TIGR02094 382 DRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGE---GKEIIQRIVEFSKRPEFRG 458 (601)
T ss_pred ccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccch---HHHHHHHHHHHHhcccCCC
Confidence 11457889999999999999999999999888642 22234555 56766543332 2456778888888766777
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEe-cCC-CCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCC-----
Q 001557 545 QVAYPKHHKQSDVPDIYRLAAKTKGVFIN-PAF-IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDP----- 617 (1054)
Q Consensus 545 ~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~-ps~-~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p----- 617 (1054)
+|.|+-..+.+--..+|+.| |++++ |+. .|++|++-+-||..|.+.+++..|...|.. ++.||+.+.+
T Consensus 459 kv~f~~~Yd~~lA~~i~aG~----Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~~~ 533 (601)
T TIGR02094 459 RIVFLENYDINLARYLVSGV----DVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEEYD 533 (601)
T ss_pred CEEEEcCCCHHHHHHHhhhh----eeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCcccc
Confidence 88887666544444566666 99999 888 999999999999999999999999999876 5689999984
Q ss_pred -------CCHHHHHHHHHHHH-----hC-----HHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 001557 618 -------HDQQSIADALLKLV-----SD-----KQLWERCRQNGLKNI-HQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 618 -------~d~~~la~aI~~ll-----~d-----~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~ 665 (1054)
.|.++|-++|++.+ ++ |..|.++.+++++.. ..|||..++++|.+.|-
T Consensus 534 ~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~yy 599 (601)
T TIGR02094 534 DEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKFY 599 (601)
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhC
Confidence 89999999998766 23 667999999999987 69999999999999873
No 121
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.74 E-value=1.1e-16 Score=172.86 Aligned_cols=251 Identities=16% Similarity=0.093 Sum_probs=153.7
Q ss_pred CEEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcC
Q 001557 769 KYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 845 (1054)
Q Consensus 769 kkLiv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~ 845 (1054)
.|+||+|||||| ++.+.+.++++|++|+++ |+.||+||||++.++..+++++++. +++||+||+.|+.+
T Consensus 1 ~KLIftDLDGTLLd~~~~~~~~a~~aL~~Lk~~----GI~vVlaTGRt~~ev~~l~~~Lgl~----~p~I~eNGA~I~~p 72 (302)
T PRK12702 1 MRLVLSSLDGSLLDLEFNSYGAARQALAALERR----SIPLVLYSLRTRAQLEHLCRQLRLE----HPFICEDGSAIYVP 72 (302)
T ss_pred CcEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHhCCC----CeEEEeCCcEEEEc
Confidence 389999999999 356888899999999997 9999999999999999999999984 47999999999977
Q ss_pred CCCCCCCC-CCcc-ccCccchhhhccccChhhHHHHHHHhhhhcc-CCCCcc---Ccccc-------cc--cccCcceEE
Q 001557 846 SSSTEDNH-GLPF-LVDLDYRFHTEYRWGGEGLRKTLVRWAASVN-DKKGEE---GKIVE-------ED--ESRSTIHCY 910 (1054)
Q Consensus 846 ~~~~~~~~-~~~~-~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~-~~~~~~---~~~v~-------~~--~~~~~~~ki 910 (1054)
........ .... ..+..|. +........++..+..+..... ...+.+ ...+. +. ...++.|.-
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~--~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SE 150 (302)
T PRK12702 73 EHYFPAGILDEQWQHRPPYYV--CALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSE 150 (302)
T ss_pred cccccccccccccccCCCceE--EecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCc
Confidence 42210000 0000 1111121 1112233444444444332211 000000 00000 00 001223333
Q ss_pred EEEecCCCCCccHHHHHHHHHHhcCeEEEEEeeCCeEEEEec------------------C---CCCHHHHHHHHHHHhC
Q 001557 911 AFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIP------------------V---LASRSQALRYLHVRWG 969 (1054)
Q Consensus 911 s~~~~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p------------------~---~asKg~AL~~L~~~~g 969 (1054)
.|.....+ ..+++.+.+.+.++ .++++++.++. . +++||+|++.|.+.+.
T Consensus 151 p~~w~~~~-----~~~~~~~~~~g~~~----~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~ 221 (302)
T PRK12702 151 IFSYSGDP-----ARLREAFAQQEANL----TQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQ 221 (302)
T ss_pred ceEecCCH-----HHHHHHHHHcCCeE----EecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHH
Confidence 33332211 13366677665432 24445788886 5 9999999999999987
Q ss_pred CCcc--CEEEEeCcCCCccccccccCcceEEEecCcchhHHhhhhccCCCccccc-ccCCCceEEeccccCHHHHHHHHH
Q 001557 970 IDLS--NVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVI-SFDSHNVIQVDEACDSYDIRASLE 1046 (1054)
Q Consensus 970 I~~e--~vvaf~GD~~d~D~~eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~t~~~~~~gI~~al~ 1046 (1054)
-... .+++ .||+.| | ++||+.+..+|++.+.....--+.+- .++ |...+... .|..+.+.|=.+++.
T Consensus 222 ~~~~~~~tia-LGDspN-D-~~mLe~~D~~vvi~~~~~~~~~~~~~------~l~~~~~~~~~~-~a~~~GP~GW~e~v~ 291 (302)
T PRK12702 222 RHLGPIKALG-IGCSPP-D-LAFLRWSEQKVVLPSPIADSLWKEAL------RLGGPEVQPQWQ-LAQLPGPEGWNEVVL 291 (302)
T ss_pred hccCCceEEE-ecCChh-h-HHHHHhCCeeEEecCCCCCCcccccc------cccCcccCccce-ecCCCCcHHHHHHHH
Confidence 6423 5667 899999 9 99999999999998777111000000 010 33444555 668889999998887
Q ss_pred Hh
Q 001557 1047 KL 1048 (1054)
Q Consensus 1047 ~~ 1048 (1054)
++
T Consensus 292 ~~ 293 (302)
T PRK12702 292 MW 293 (302)
T ss_pred HH
Confidence 64
No 122
>PLN03017 trehalose-phosphatase
Probab=99.71 E-value=1.1e-16 Score=179.52 Aligned_cols=205 Identities=12% Similarity=0.091 Sum_probs=131.2
Q ss_pred CCCEEEEEEecCCCC-------h-hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcC
Q 001557 767 RRKYVFVIAADCDTT-------S-DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNS 838 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL~-------~-~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~n 838 (1054)
.++.+||+|+||||. + .+++.++++|++|. + ++.|+|+|||++..+.+++.-.+ -++||+|
T Consensus 109 ~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~----~~~vaIvSGR~~~~l~~~~~l~~------l~l~g~h 177 (366)
T PLN03017 109 GKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-K----CFPTAIVTGRCIDKVYNFVKLAE------LYYAGSH 177 (366)
T ss_pred CCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-c----CCcEEEEeCCCHHHHHHhhcccC------ceEEEcC
Confidence 456899999999993 2 69999999999999 4 67899999999999998854322 2799999
Q ss_pred CcEEEcCCCCCC-C--CCC-CccccCccchhhhccccChhhHHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEe
Q 001557 839 GSELYYPSSSTE-D--NHG-LPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEV 914 (1054)
Q Consensus 839 Ga~I~~~~~~~~-~--~~~-~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~ 914 (1054)
|++|..++.... . +.. ..+.....|...+.. + ...+.....+.++...+.| .+++++|+
T Consensus 178 Ga~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~-v-~~~L~~~~~~~pGa~VE~K---------------~~~vavHy 240 (366)
T PLN03017 178 GMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDE-V-YRQLLEKTKSTPGAKVENH---------------KFCASVHF 240 (366)
T ss_pred CcEEecCCCcceeccccccccccccchhhHHHHHH-H-HHHHHHHHhcCCCCEEEec---------------CcEEEEEc
Confidence 999987642100 0 000 000001111111110 0 0112233334455544443 68899999
Q ss_pred cCCCCCccHHHHHHHHHHhcCe-EEEEEeeCCeEEEEecC-CCCHHHHHHHHHHHhCCCc--cCEEEEeCcCCCcccccc
Q 001557 915 TNPQMIPPVKELRKLMRIQALR-CHVIYCQNGTKLHVIPV-LASRSQALRYLHVRWGIDL--SNVVVIAGECGDTDYEGL 990 (1054)
Q Consensus 915 ~~~~~~~~~~el~~~l~~~~~~-~~v~~s~~~~~lEV~p~-~asKg~AL~~L~~~~gI~~--e~vvaf~GD~~d~D~~eM 990 (1054)
+..+. ....++...+...... ..+...++.+.+||.|. +.+||.|+++|++.+|..- ..+++|+||+-+ | ++|
T Consensus 241 R~ad~-~~~~~l~~~~~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~T-D-EDa 317 (366)
T PLN03017 241 RCVDE-KKWSELVLQVRSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRT-D-EDA 317 (366)
T ss_pred CcCCH-HHHHHHHHHHHHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCc-c-HHH
Confidence 76532 1223333333321111 11334456569999995 9999999999999998763 346788999888 9 999
Q ss_pred ccCc-----ceEEEecC
Q 001557 991 LGGV-----HKTVILKG 1002 (1054)
Q Consensus 991 L~~a-----g~gVaMgN 1002 (1054)
|+.+ |.||.+|.
T Consensus 318 F~~L~~~~~G~gI~VG~ 334 (366)
T PLN03017 318 FKMLRDRGEGFGILVSK 334 (366)
T ss_pred HHHHhhcCCceEEEECC
Confidence 9965 57888874
No 123
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.70 E-value=2.1e-16 Score=183.23 Aligned_cols=271 Identities=14% Similarity=0.077 Sum_probs=172.1
Q ss_pred CcceEEEEcC-CCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEe
Q 001557 305 IWPVAIHGHY-ADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 383 (1054)
Q Consensus 305 ~~pDVIh~h~-~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~ 383 (1054)
.+||+||+|. ...++++++++..+|+|++++.+++-.. +.... . ...+.+++ ..+.+|.+++
T Consensus 85 ~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~~s~--------~~~~~--~--~~~~~r~~-----~~~~ad~~~~ 147 (365)
T TIGR00236 85 EKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRTG--------DRYSP--M--PEEINRQL-----TGHIADLHFA 147 (365)
T ss_pred cCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCCCcC--------CCCCC--C--ccHHHHHH-----HHHHHHhccC
Confidence 6799999996 4667778888889999998775543110 00000 0 00011211 2335899999
Q ss_pred cCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCC-cCCCcccCCCCCCCcccccCCCCCCCCCch
Q 001557 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGI-EFHHIVRHNGDVDGEVERDEGSPASPDPPI 462 (1054)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGI-D~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1054)
+|+...+.+.+. |.+..++.+++||+ |...+..... ..
T Consensus 148 ~s~~~~~~l~~~-----------------------G~~~~~I~vign~~~d~~~~~~~~~------------------~~ 186 (365)
T TIGR00236 148 PTEQAKDNLLRE-----------------------NVKADSIFVTGNTVIDALLTNVEIA------------------YS 186 (365)
T ss_pred CCHHHHHHHHHc-----------------------CCCcccEEEeCChHHHHHHHHHhhc------------------cc
Confidence 999887765432 22223899999997 4322211100 00
Q ss_pred hHHHhhhcCCCCCcEEEEEe-CC-CCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHH
Q 001557 463 WSEIMHFFSNPRKPMILALA-RP-DPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDK 539 (1054)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vg-Rl-d~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~ 539 (1054)
...+.++. .+++++++.+ |. ...||+..+++|+..+.+.. +++.+ +.+.+.. + .... +...
T Consensus 187 ~~~~~~~~--~~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~--~~~~~vi~~~~~~-~--------~~~~---~~~~ 250 (365)
T TIGR00236 187 SPVLSEFG--EDKRYILLTLHRRENVGEPLENIFKAIREIVEEF--EDVQIVYPVHLNP-V--------VREP---LHKH 250 (365)
T ss_pred hhHHHhcC--CCCCEEEEecCchhhhhhHHHHHHHHHHHHHHHC--CCCEEEEECCCCh-H--------HHHH---HHHH
Confidence 01112222 2345666665 43 24589999999999985433 34443 3333211 0 1111 2333
Q ss_pred cCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEc-cccCcccceeeCCceEEeCCC
Q 001557 540 YDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVAT-KNGGPVDIHRVLDNGLLVDPH 618 (1054)
Q Consensus 540 ~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat-~~Gg~~eiv~~~~~Gllv~p~ 618 (1054)
++..++|.|.+.++..++..+|+.| |++|.+| |.+++|||+||+|||++ +.|+.++++..+ .++++ +.
T Consensus 251 ~~~~~~v~~~~~~~~~~~~~~l~~a----d~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv-~~ 319 (365)
T TIGR00236 251 LGDSKRVHLIEPLEYLDFLNLAANS----HLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLV-GT 319 (365)
T ss_pred hCCCCCEEEECCCChHHHHHHHHhC----CEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEe-CC
Confidence 4555689999999989999999999 9998877 56689999999999996 678888888754 56677 57
Q ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHH
Q 001557 619 DQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSY 660 (1054)
Q Consensus 619 d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~y 660 (1054)
|+++++++|.+++++++.+++++++...+....+++.+++..
T Consensus 320 d~~~i~~ai~~ll~~~~~~~~~~~~~~~~g~~~a~~ri~~~l 361 (365)
T TIGR00236 320 DKENITKAAKRLLTDPDEYKKMSNASNPYGDGEASERIVEEL 361 (365)
T ss_pred CHHHHHHHHHHHHhChHHHHHhhhcCCCCcCchHHHHHHHHH
Confidence 999999999999999988877766552222334444444433
No 124
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.69 E-value=9.2e-15 Score=167.25 Aligned_cols=243 Identities=11% Similarity=0.065 Sum_probs=161.8
Q ss_pred Ccc-eEEEEcCCCc-h--HHHHH--HHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccC
Q 001557 305 IWP-VAIHGHYADA-G--DAAAL--LSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDAS 378 (1054)
Q Consensus 305 ~~p-DVIh~h~~~a-~--~~a~~--l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~a 378 (1054)
.+| |+||.|++.. + ..... ..+..|+|+|+++|++++..... .+ ..+ ..|...++.|
T Consensus 62 ~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~---~~------------~~~--~~~~~~~~~a 124 (333)
T PRK09814 62 LKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDS---NY------------YLM--KEEIDMLNLA 124 (333)
T ss_pred CCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccc---cc------------hhh--HHHHHHHHhC
Confidence 446 9999998633 2 11222 22334899999999987643210 00 001 2356689999
Q ss_pred CEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCC
Q 001557 379 EIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASP 458 (1054)
Q Consensus 379 d~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~ 458 (1054)
|.||++|+.+.+.+... |....++.++++..+.....+. .
T Consensus 125 D~iI~~S~~~~~~l~~~-----------------------g~~~~~i~~~~~~~~~~~~~~~-----------------~ 164 (333)
T PRK09814 125 DVLIVHSKKMKDRLVEE-----------------------GLTTDKIIVQGIFDYLNDIELV-----------------K 164 (333)
T ss_pred CEEEECCHHHHHHHHHc-----------------------CCCcCceEeccccccccccccc-----------------c
Confidence 99999999887765331 1111266666654433111100 0
Q ss_pred CCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHH
Q 001557 459 DPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLI 537 (1054)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~ 537 (1054)
.....+.|+|+|++...+++.. . . +++.+ |+|+++...
T Consensus 165 ------------~~~~~~~i~yaG~l~k~~~l~~-------~---~--~~~~l~i~G~g~~~~----------------- 203 (333)
T PRK09814 165 ------------TPSFQKKINFAGNLEKSPFLKN-------W---S--QGIKLTVFGPNPEDL----------------- 203 (333)
T ss_pred ------------cccCCceEEEecChhhchHHHh-------c---C--CCCeEEEECCCcccc-----------------
Confidence 0134568999999995432211 1 2 23443 778886411
Q ss_pred HHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC-----------CCCCcHHHHHHHHcCCCEEEccccCcccce
Q 001557 538 DKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF-----------IEPFGLTLIEAAAYGLPIVATKNGGPVDIH 606 (1054)
Q Consensus 538 ~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~-----------~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv 606 (1054)
...++|.|.|+++.++++.+|+.. +.+++.. .-.+|.++.||||||+|||+++.|+..++|
T Consensus 204 ---~~~~~V~f~G~~~~eel~~~l~~~-----~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V 275 (333)
T PRK09814 204 ---ENSANISYKGWFDPEELPNELSKG-----FGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFI 275 (333)
T ss_pred ---ccCCCeEEecCCCHHHHHHHHhcC-----cCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHH
Confidence 234689999999999999999873 4444321 235788899999999999999999999999
Q ss_pred eeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHH
Q 001557 607 RVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHC 657 (1054)
Q Consensus 607 ~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a 657 (1054)
+++.+|++++ +.++++++|..+ +++++++|++++++..+.+.--...
T Consensus 276 ~~~~~G~~v~--~~~el~~~l~~~--~~~~~~~m~~n~~~~~~~~~~g~~~ 322 (333)
T PRK09814 276 VENGLGFVVD--SLEELPEIIDNI--TEEEYQEMVENVKKISKLLRNGYFT 322 (333)
T ss_pred HhCCceEEeC--CHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHhcchhH
Confidence 9999999998 788999999985 3567888999999887544433333
No 125
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.68 E-value=3.2e-15 Score=174.09 Aligned_cols=265 Identities=13% Similarity=0.028 Sum_probs=160.9
Q ss_pred CcceEEEEcCCC-chHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEe
Q 001557 305 IWPVAIHGHYAD-AGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 383 (1054)
Q Consensus 305 ~~pDVIh~h~~~-a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~ 383 (1054)
.+||+||++... .....+..++..++|+++..|...... .....++ ..+.+|.|++
T Consensus 84 ~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~~~~~-----------------~~~~~~~------~~~~~d~i~~ 140 (380)
T PRK00025 84 EPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPSVWAW-----------------RQGRAFK------IAKATDHVLA 140 (380)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCchhhc-----------------CchHHHH------HHHHHhhhee
Confidence 679999998642 222222334556999998766431100 0001111 2567899999
Q ss_pred cCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchh
Q 001557 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIW 463 (1054)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1054)
+++...+.+.. +. + ++.+++|.+....... +...
T Consensus 141 ~~~~~~~~~~~-~g-----------------~--------~~~~~G~p~~~~~~~~--------------------~~~~ 174 (380)
T PRK00025 141 LFPFEAAFYDK-LG-----------------V--------PVTFVGHPLADAIPLL--------------------PDRA 174 (380)
T ss_pred CCccCHHHHHh-cC-----------------C--------CeEEECcCHHHhcccc--------------------cChH
Confidence 99865544311 11 1 4556665543221100 0011
Q ss_pred HHHhhhcCCCCCcEEEEE-e-CCCCC-CCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHH
Q 001557 464 SEIMHFFSNPRKPMILAL-A-RPDPK-KNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDK 539 (1054)
Q Consensus 464 ~~~~~~~~~~~~~~Il~v-g-Rld~~-Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~ 539 (1054)
..+.++..+++.++|+.+ | |.... ++++.+++|+..+.+. .+++.+ ++|+.+. ....+.+++.+
T Consensus 175 ~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~--~~~~~~ii~~~~~~----------~~~~~~~~~~~ 242 (380)
T PRK00025 175 AARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQR--YPDLRFVLPLVNPK----------RREQIEEALAE 242 (380)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEecCChh----------hHHHHHHHHhh
Confidence 122334445566765443 4 34343 4578999999988543 345554 4443221 12345555565
Q ss_pred c-CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEc-----------------cccC
Q 001557 540 Y-DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVAT-----------------KNGG 601 (1054)
Q Consensus 540 ~-~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat-----------------~~Gg 601 (1054)
+ ++. +.+. ..++..+|+.| |++|.+| |.+.+|||+||+|+|+. +.++
T Consensus 243 ~~~~~--v~~~----~~~~~~~~~~a----Dl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~ 307 (380)
T PRK00025 243 YAGLE--VTLL----DGQKREAMAAA----DAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVS 307 (380)
T ss_pred cCCCC--eEEE----cccHHHHHHhC----CEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeee
Confidence 5 443 4442 25899999999 9999987 88888999999999987 5667
Q ss_pred cccceeeCC--ceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 001557 602 PVDIHRVLD--NGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISS 666 (1054)
Q Consensus 602 ~~eiv~~~~--~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~ 666 (1054)
.++++.++. .+++.+..|+++++++|.++++|++.++++++++.+..+.. -..-+++..+.+.+
T Consensus 308 l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i~~ 373 (380)
T PRK00025 308 LPNLLAGRELVPELLQEEATPEKLARALLPLLADGARRQALLEGFTELHQQL-RCGADERAAQAVLE 373 (380)
T ss_pred hHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHH
Confidence 778776543 45777888999999999999999999999999876555332 12234444444443
No 126
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.68 E-value=2.1e-15 Score=174.39 Aligned_cols=250 Identities=16% Similarity=0.107 Sum_probs=163.7
Q ss_pred CcceEEEEcCC-CchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEe
Q 001557 305 IWPVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 383 (1054)
Q Consensus 305 ~~pDVIh~h~~-~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~ 383 (1054)
.+||+||+|.. ...+++...++..++|++++.|+..... .+. . +...++ ...+.+|.+++
T Consensus 87 ~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~------~~~-----~---~~~~r~-----~~~~~ad~~~~ 147 (363)
T cd03786 87 EKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFD------RGM-----P---DEENRH-----AIDKLSDLHFA 147 (363)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCC------CCC-----C---chHHHH-----HHHHHhhhccC
Confidence 46999999964 4556677778888999998777542110 000 0 001111 13567899999
Q ss_pred cCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCC-cCCCcccCCCCCCCcccccCCCCCCCCCch
Q 001557 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGI-EFHHIVRHNGDVDGEVERDEGSPASPDPPI 462 (1054)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGI-D~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1054)
+|+...+.+.+. |.+..++.+++|++ |...+.+..... .
T Consensus 148 ~s~~~~~~l~~~-----------------------G~~~~kI~vign~v~d~~~~~~~~~~~----------------~- 187 (363)
T cd03786 148 PTEEARRNLLQE-----------------------GEPPERIFVVGNTMIDALLRLLELAKK----------------E- 187 (363)
T ss_pred CCHHHHHHHHHc-----------------------CCCcccEEEECchHHHHHHHHHHhhcc----------------c-
Confidence 999876654321 22234899999985 543332211000 0
Q ss_pred hHHHhhhcCCCCCcEEEEEeCCCC---CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHH
Q 001557 463 WSEIMHFFSNPRKPMILALARPDP---KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDK 539 (1054)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vgRld~---~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~ 539 (1054)
..+..+..+++..++++.||+.. .||++.+++|+..+.. . ++.+++++.+. ....+.+.+.+
T Consensus 188 -~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~--~--~~~vi~~~~~~----------~~~~l~~~~~~ 252 (363)
T cd03786 188 -LILELLGLLPKKYILVTLHRVENVDDGEQLEEILEALAELAE--E--DVPVVFPNHPR----------TRPRIREAGLE 252 (363)
T ss_pred -hhhhhcccCCCCEEEEEeCCccccCChHHHHHHHHHHHHHHh--c--CCEEEEECCCC----------hHHHHHHHHHh
Confidence 00112233344456778898875 7999999999998842 1 45554433221 12445666666
Q ss_pred cCC-CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccc-cCcccceeeCCceEEeCC
Q 001557 540 YDL-YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN-GGPVDIHRVLDNGLLVDP 617 (1054)
Q Consensus 540 ~~l-~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~-Gg~~eiv~~~~~Gllv~p 617 (1054)
+++ .++|.|.++...++++.+|..| |++|.+|. | +..|||++|+|+|+++. +..++.++ +|+.+.+
T Consensus 253 ~~~~~~~v~~~~~~~~~~~~~l~~~a----d~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~---~g~~~~~ 320 (363)
T cd03786 253 FLGHHPNVLLISPLGYLYFLLLLKNA----DLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVE---SGTNVLV 320 (363)
T ss_pred hccCCCCEEEECCcCHHHHHHHHHcC----cEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhh---eeeEEec
Confidence 665 5689999988888999999999 99999984 4 47899999999999975 44566654 3443333
Q ss_pred -CCHHHHHHHHHHHHhCHHHHHHH
Q 001557 618 -HDQQSIADALLKLVSDKQLWERC 640 (1054)
Q Consensus 618 -~d~~~la~aI~~ll~d~~~~~~~ 640 (1054)
.|+++++++|.++++++..+..+
T Consensus 321 ~~~~~~i~~~i~~ll~~~~~~~~~ 344 (363)
T cd03786 321 GTDPEAILAAIEKLLSDEFAYSLM 344 (363)
T ss_pred CCCHHHHHHHHHHHhcCchhhhcC
Confidence 37999999999999988766554
No 127
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.67 E-value=1.4e-13 Score=147.82 Aligned_cols=381 Identities=16% Similarity=0.134 Sum_probs=240.1
Q ss_pred HHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCcccccccCCC
Q 001557 196 YVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWP 275 (1054)
Q Consensus 196 ~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~k~~l~~ 275 (1054)
.+..-|..|++. | ++|+++.-..+.| . +++...+.++|+.+|..|.-.+.++
T Consensus 28 RMqYHA~Sla~~-g-f~VdliGy~~s~p---------~------------e~l~~hprI~ih~m~~l~~~~~~p~----- 79 (444)
T KOG2941|consen 28 RMQYHALSLAKL-G-FQVDLIGYVESIP---------L------------EELLNHPRIRIHGMPNLPFLQGGPR----- 79 (444)
T ss_pred HHHHHHHHHHHc-C-CeEEEEEecCCCC---------h------------HHHhcCCceEEEeCCCCcccCCCch-----
Confidence 344467888999 8 9999997442211 1 3344568999999987654222221
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCC---chHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCC
Q 001557 276 HIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYAD---AGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGR 352 (1054)
Q Consensus 276 ~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~---a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~ 352 (1054)
+....-.++..+..+..+|-. . ..||+|..+.++ .-.++.+.+...|.++++..|++++.. .--+..|.
T Consensus 80 -~~~l~lKvf~Qfl~Ll~aL~~---~---~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl-~l~~~~g~ 151 (444)
T KOG2941|consen 80 -VLFLPLKVFWQFLSLLWALFV---L---RPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSL-QLKLKLGF 151 (444)
T ss_pred -hhhhHHHHHHHHHHHHHHHHh---c---cCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHH-HHHhhcCC
Confidence 111222222222222222222 1 458999998863 455666777888999999999998762 11122232
Q ss_pred CChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCC
Q 001557 353 LSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGI 432 (1054)
Q Consensus 353 ~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGI 432 (1054)
. +...++.++. |+..-+.|+.-+|+|+.+.+++...+... +-..+|.++.. .+.
T Consensus 152 ~-----h~lV~l~~~~--E~~fgk~a~~nLcVT~AMr~dL~qnWgi~-------------ra~v~YDrPps------~~~ 205 (444)
T KOG2941|consen 152 Q-----HPLVRLVRWL--EKYFGKLADYNLCVTKAMREDLIQNWGIN-------------RAKVLYDRPPS------KPT 205 (444)
T ss_pred C-----CchHHHHHHH--HHHhhcccccchhhHHHHHHHHHHhcCCc-------------eeEEEecCCCC------CCC
Confidence 1 1233444553 77788999999999999988876665421 11233344332 111
Q ss_pred cCCC----cccCCCCCCCcccccCCCCCCCCCchhHHHhh------hcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhc--
Q 001557 433 EFHH----IVRHNGDVDGEVERDEGSPASPDPPIWSEIMH------FFSNPRKPMILALARPDPKKNITTLVKAFGEC-- 500 (1054)
Q Consensus 433 D~~~----f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l-- 500 (1054)
+.+. |-+...+-.....+.. . .+.-..-+...+ +.......++++--...+..++..|++|+...
T Consensus 206 ~l~~~H~lf~~l~~d~~~f~ar~~-q--~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~ 282 (444)
T KOG2941|consen 206 PLDEQHELFMKLAGDHSPFRAREP-Q--DKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEE 282 (444)
T ss_pred chhHHHHHHhhhccccchhhhccc-c--cchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhh
Confidence 1111 2221110000000000 0 000000011111 11123344566667788999999999999833
Q ss_pred ---ccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC
Q 001557 501 ---RPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF 576 (1054)
Q Consensus 501 ---~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~ 576 (1054)
.+-...|++.. |-|.|+. .+.+.+.+.++++...-....++..+|.+.++..|+ .+|++.+|.
T Consensus 283 ~~~~~~~~lP~llciITGKGPl-----------kE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saD--lGVcLHtSS 349 (444)
T KOG2941|consen 283 QLYDKTHNLPSLLCIITGKGPL-----------KEKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASAD--LGVCLHTSS 349 (444)
T ss_pred hhhhccCCCCcEEEEEcCCCch-----------hHHHHHHHHHhcccceeeeecccccccchhHhhccc--cceEeeecC
Confidence 23345577765 5577775 445667888999987777788999999999999993 356667764
Q ss_pred -CCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHhcC
Q 001557 577 -IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVS----DKQLWERCRQNGLKNIHQF 651 (1054)
Q Consensus 577 -~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~----d~~~~~~~~~~~~~~v~~f 651 (1054)
.=-.|+++.....||+||+|-+.....|+|+++.||++|+ |.+++++.|.-+++ +.++..++.++.++. +..
T Consensus 350 SGLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~-~e~ 426 (444)
T KOG2941|consen 350 SGLDLPMKVVDMFGCGLPVCAVNFKCLDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELNQLKKNLREE-QEL 426 (444)
T ss_pred cccCcchhHHHhhcCCCceeeecchhHHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH-Hhh
Confidence 3457899999999999999999999999999999999998 99999999999999 888888888888887 445
Q ss_pred CHHHHH
Q 001557 652 SWPEHC 657 (1054)
Q Consensus 652 sw~~~a 657 (1054)
.|+..-
T Consensus 427 RW~~~W 432 (444)
T KOG2941|consen 427 RWDESW 432 (444)
T ss_pred hHHHHH
Confidence 555433
No 128
>PLN02151 trehalose-phosphatase
Probab=99.65 E-value=1.2e-15 Score=170.67 Aligned_cols=204 Identities=11% Similarity=0.113 Sum_probs=130.5
Q ss_pred CCCEEEEEEecCCCC--------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcC
Q 001557 767 RRKYVFVIAADCDTT--------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNS 838 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL~--------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~n 838 (1054)
.++.+||+|+||||. ..+++.++++|++|.+ +..|+|+|||++..+.+++.-.++ +++++|
T Consensus 96 ~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~-----~~~vaIvSGR~~~~l~~~~~~~~l------~laGsH 164 (354)
T PLN02151 96 GKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAK-----CFPTAIVSGRCREKVSSFVKLTEL------YYAGSH 164 (354)
T ss_pred CCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhc-----CCCEEEEECCCHHHHHHHcCCccc------eEEEeC
Confidence 456899999999992 4689999999999995 457999999999999999865455 699999
Q ss_pred CcEEEcCCCCC-CC-CCC-CccccCccchhhhccccChhhHHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEec
Q 001557 839 GSELYYPSSST-ED-NHG-LPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVT 915 (1054)
Q Consensus 839 Ga~I~~~~~~~-~~-~~~-~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~ 915 (1054)
|+++..++... .. ... .....+..|...+.. -...+.+...+.++...+.| .+++++|++
T Consensus 165 G~e~~~p~~g~~~~~~~~~~~~~~~~~~~~~i~~--v~~~l~~~~~~~pG~~VE~K---------------~~slavHYR 227 (354)
T PLN02151 165 GMDIKGPEQGSKYKKENQSLLCQPATEFLPVINE--VYKKLVEKTKSIPGAKVENN---------------KFCASVHFR 227 (354)
T ss_pred CceeecCCCCccccccccccccccchhhHHHHHH--HHHHHHHHHhcCCCCEEEec---------------CcEEEEEeC
Confidence 99998653110 00 000 000111122111110 00012222234455444433 688999997
Q ss_pred CCCCCccHHHHHHHHHHhcCeE-EEEEeeCCeEEEEecC-CCCHHHHHHHHHHHhCCCc--cCEEEEeCcCCCccccccc
Q 001557 916 NPQMIPPVKELRKLMRIQALRC-HVIYCQNGTKLHVIPV-LASRSQALRYLHVRWGIDL--SNVVVIAGECGDTDYEGLL 991 (1054)
Q Consensus 916 ~~~~~~~~~el~~~l~~~~~~~-~v~~s~~~~~lEV~p~-~asKg~AL~~L~~~~gI~~--e~vvaf~GD~~d~D~~eML 991 (1054)
..+.. ...++...+....... .+...++.+.+||.|. +++||.|+++|++.++..- ..+++|+||+-+ | ++||
T Consensus 228 ~a~~~-~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~T-D-EDaF 304 (354)
T PLN02151 228 CVEEN-KWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRT-D-EDAF 304 (354)
T ss_pred CCChH-HHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCc-H-HHHH
Confidence 65421 1233434433211111 1334456569999995 9999999999999988653 246788999888 9 9999
Q ss_pred cCc-----ceEEEec
Q 001557 992 GGV-----HKTVILK 1001 (1054)
Q Consensus 992 ~~a-----g~gVaMg 1001 (1054)
+.+ |.||.++
T Consensus 305 ~~L~~~~~G~gI~Vg 319 (354)
T PLN02151 305 KILRDKKQGLGILVS 319 (354)
T ss_pred HHHhhcCCCccEEec
Confidence 854 5667776
No 129
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=99.62 E-value=4.7e-15 Score=160.25 Aligned_cols=196 Identities=19% Similarity=0.161 Sum_probs=136.5
Q ss_pred ccCCCEEEEEEecCCCC--------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEE
Q 001557 765 LRRRKYVFVIAADCDTT--------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFIC 836 (1054)
Q Consensus 765 ~~~~kkLiv~DiDGTL~--------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~ 836 (1054)
...++++|++|+||||+ ..+++.++++|+.|.++ +.+.++|+|||+..++..++.-.++ ++||
T Consensus 14 ~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~---~~~~v~iiSGR~~~~l~~~~~v~~i------~l~a 84 (266)
T COG1877 14 LNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASD---PRNVVAIISGRSLAELERLFGVPGI------GLIA 84 (266)
T ss_pred ccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhc---CCCeEEEEeCCCHHHHHHhcCCCCc------cEEE
Confidence 35678999999999992 55889999999999998 6778999999999999999985555 6999
Q ss_pred cCCcEEEcCCCCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEecC
Q 001557 837 NSGSELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTN 916 (1054)
Q Consensus 837 ~nGa~I~~~~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~ 916 (1054)
+||+++..+.+..... .....+..|...+ .+.++.++.++|++..+.| .+.++||+++
T Consensus 85 ehGa~~r~~~g~~~~~--~~~~~~~~~~~~v-----~~~l~~~v~r~pGs~iE~K---------------~~a~~~Hyr~ 142 (266)
T COG1877 85 EHGAEVRDPNGKWWIN--LAEEADLRWLKEV-----AAILEYYVERTPGSYIERK---------------GFAVALHYRN 142 (266)
T ss_pred ecceEEecCCCCeeEe--cCHHHHhhHHHHH-----HHHHHHHhhcCCCeEEEEc---------------CcEEEEeecc
Confidence 9999997554211000 0011111222222 2356777788888877665 5778888876
Q ss_pred CCCCcc-HHHHHHHHHHhcCe-EEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCc
Q 001557 917 PQMIPP-VKELRKLMRIQALR-CHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGV 994 (1054)
Q Consensus 917 ~~~~~~-~~el~~~l~~~~~~-~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~a 994 (1054)
.+.... ...+.......... +++ ..+...+|+.|.++|||.|+++++++.+.+- .+++|.||+-+ | ++||+.+
T Consensus 143 a~~~~~~~~a~~~~~~~~~~~~~~v--~~gk~vVEvrp~~~~KG~a~~~i~~~~~~~~-~~~~~aGDD~T-D-E~~F~~v 217 (266)
T COG1877 143 AEDDEGAALALAEAATLINELKLRV--TPGKMVVELRPPGVSKGAAIKYIMDELPFDG-RFPIFAGDDLT-D-EDAFAAV 217 (266)
T ss_pred CCchhhHHHHHHHHHhccccccEEE--EeCceEEEEeeCCcchHHHHHHHHhcCCCCC-CcceecCCCCc-c-HHHHHhh
Confidence 553221 11222222222112 333 3333489999999999999999999887664 56667899888 9 9999988
Q ss_pred ce
Q 001557 995 HK 996 (1054)
Q Consensus 995 g~ 996 (1054)
..
T Consensus 218 ~~ 219 (266)
T COG1877 218 NK 219 (266)
T ss_pred cc
Confidence 63
No 130
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=99.58 E-value=2.5e-15 Score=163.16 Aligned_cols=204 Identities=16% Similarity=0.177 Sum_probs=110.0
Q ss_pred EEEecCCC--------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEc
Q 001557 773 VIAADCDT--------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYY 844 (1054)
Q Consensus 773 v~DiDGTL--------~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~ 844 (1054)
|+|+|||| ...+++.++++|++|.+. +++.|+|+|||+...+..+..-.++ .++++||+++..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~---~~~~v~IvSGR~~~~~~~~~~~~~i------~l~gehG~e~~~ 71 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAAD---PNNTVAIVSGRSLDDLERFGGIPNI------GLAGEHGAEIRR 71 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHH---SE--EEEE-SS-HHHHHHH-S-SS-------EEEEGGGTEEEE
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhcc---CCCEEEEEEeCCHHHhHHhcCCCCc------eEEEEeeEEecc
Confidence 68999999 256889999999999998 7788999999999996555543334 699999999998
Q ss_pred CCCCCCCCCCCccccCccchh---hhccccChh---hHHHHHHHhhhhccCCCCccCcccccccccCcceEEEEEecCCC
Q 001557 845 PSSSTEDNHGLPFLVDLDYRF---HTEYRWGGE---GLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQ 918 (1054)
Q Consensus 845 ~~~~~~~~~~~~~~~d~~~~~---~i~~~w~~e---~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~~~ 918 (1054)
++.. .|.. .....|... .++.+..+++++..+.| .++++||++...
T Consensus 72 ~~~~-------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K---------------~~sv~~Hyr~~~ 123 (235)
T PF02358_consen 72 PGGS-------------EWTNLPADEDLEWKDEVREILEYFAERTPGSFIEDK---------------EFSVAFHYRNAP 123 (235)
T ss_dssp TTE--------------EEE-TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEE---------------TTEEEEE-TTS-
T ss_pred Cccc-------------cccccccccchHHHHHHHHHHHHHHhhccCcEEEEC---------------CeEEEEEecCCC
Confidence 7521 1110 111223322 23334445566555443 678899987655
Q ss_pred CC---ccHHHHHHHHHHh---cCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCC--ccCEEEEeCcCCCcccccc
Q 001557 919 MI---PPVKELRKLMRIQ---ALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGID--LSNVVVIAGECGDTDYEGL 990 (1054)
Q Consensus 919 ~~---~~~~el~~~l~~~---~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~--~e~vvaf~GD~~d~D~~eM 990 (1054)
.. ..+.++.+.+... ...++++. +...+||.|.+.+||.|+++|++.++.. ..++++|+||+-+ | ++|
T Consensus 124 ~~~~~~~~~~l~~~l~~~~~~~~~~~v~~--g~~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~t-D-E~~ 199 (235)
T PF02358_consen 124 PEFGEAQARELAEQLREILASHPGLEVVP--GKKVVEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRT-D-EDA 199 (235)
T ss_dssp ST----THHHHHHHHHHHHHHH-T-EEEE---SSEEEEE-TT--HHHHHHHHHTTS---------EEEEESSHH-H-HHH
T ss_pred cchhhhHHHHHHHHHHHHHHhCCCEEEEE--CCCEEEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCC-C-HHH
Confidence 33 1345555555442 12344433 3348999999999999999999998764 1235555888777 8 999
Q ss_pred ccCc------ceEEEecCcchhHHhhhhccCCCcc
Q 001557 991 LGGV------HKTVILKGVGESARKLHANRNYSLE 1019 (1054)
Q Consensus 991 L~~a------g~gVaMgNa~~~~~~~~~~~~~~~~ 1019 (1054)
|+.+ |.+|.++... ...++++.+|-+.
T Consensus 200 f~~~~~~~~~~~~i~V~~~~--~~~~~t~A~y~l~ 232 (235)
T PF02358_consen 200 FRALRELEEGGFGIKVGSVS--VGEKPTAASYRLD 232 (235)
T ss_dssp HHTTTTS----EEEEES------------------
T ss_pred HHHHHhcccCCCCeEEEeec--ccccccccccccc
Confidence 9874 4577887544 1334455555443
No 131
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.58 E-value=1e-13 Score=161.37 Aligned_cols=325 Identities=19% Similarity=0.235 Sum_probs=182.0
Q ss_pred cceEEEEcCCCchHHHHHHHc-cCCCCEEEEeCCCccchHHHHHHhC---------CCChhhhhhHhHHHHHHHHHHhhh
Q 001557 306 WPVAIHGHYADAGDAAALLSG-ALNVPMVFTGHSLGRDKLEQLLKQG---------RLSRDEINTTYKIMRRIEAEELSL 375 (1054)
Q Consensus 306 ~pDVIh~h~~~a~~~a~~l~~-~~~iP~V~t~H~l~~~~~~~l~~~g---------~~~~~~i~~~~~~~~ri~~E~~~l 375 (1054)
..-|.|+|-|++|....++.+ ...|.+|||.|..-.. +.+..| .+........+.+..+...|+.+.
T Consensus 143 ~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lG---R~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA 219 (633)
T PF05693_consen 143 PKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLG---RYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAA 219 (633)
T ss_dssp EEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHH---HHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHH
T ss_pred CcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchh---hHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHH
Confidence 456889999998887766653 4578899999975322 122211 112233344556777888899999
Q ss_pred ccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCC
Q 001557 376 DASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSP 455 (1054)
Q Consensus 376 ~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~ 455 (1054)
..||++.++|+-.+.+-..+.+.. .=.|+|||++.+.|.... ++++..
T Consensus 220 ~~AdvFTTVSeITa~Ea~~LL~r~------------------------pDvV~pNGl~v~~~~~~~--------efqnl~ 267 (633)
T PF05693_consen 220 HYADVFTTVSEITAKEAEHLLKRK------------------------PDVVTPNGLNVDKFPALH--------EFQNLH 267 (633)
T ss_dssp HHSSEEEESSHHHHHHHHHHHSS--------------------------SEE----B-GGGTSSTT--------HHHHHH
T ss_pred HhcCeeeehhhhHHHHHHHHhCCC------------------------CCEEcCCCccccccccch--------HHHHHH
Confidence 999999999998777755544331 236889999998776321 000000
Q ss_pred CCCCCchhHHHhhhc-C----CCC-CcEEEEEeCCCC-CCCHHHHHHHHHhcccc----cCCCcEE-EEEecC----CCc
Q 001557 456 ASPDPPIWSEIMHFF-S----NPR-KPMILALARPDP-KKNITTLVKAFGECRPL----RELANLT-LIMGNR----DDI 519 (1054)
Q Consensus 456 ~~~~~~~~~~~~~~~-~----~~~-~~~Il~vgRld~-~Kgi~~ll~A~~~l~~~----~~~~~l~-LIiG~~----~~~ 519 (1054)
......+.+..+..+ . +++ ..+|+..||... .||++.+|+|+.+|... .....++ +|+-.. -..
T Consensus 268 ~~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~v 347 (633)
T PF05693_consen 268 AKAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNV 347 (633)
T ss_dssp HHHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-H
T ss_pred HHHHHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCH
Confidence 011223333333322 1 123 345777899994 79999999999998531 1122233 333100 011
Q ss_pred hhhh---------hchHHH--------------------------------------------------------HHHHH
Q 001557 520 DEMS---------GTNAAL--------------------------------------------------------LLSIL 534 (1054)
Q Consensus 520 ~~~~---------~~~~~~--------------------------------------------------------~~~i~ 534 (1054)
+.++ ....++ -..|.
T Consensus 348 e~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpIL 427 (633)
T PF05693_consen 348 ESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPIL 427 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHH
Confidence 1111 111100 01122
Q ss_pred HHHHHcCCCC----C--EEe-CCCCCCC------cHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccC
Q 001557 535 KLIDKYDLYG----Q--VAY-PKHHKQS------DVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG 601 (1054)
Q Consensus 535 ~l~~~~~l~~----~--V~~-~g~~~~~------dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg 601 (1054)
..+.++++.+ + |.| +-+++.. +..++++.| |+.|+||++||+|.|.+|+.|+|+|.|+|+..|
T Consensus 428 n~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~Gc----dLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsG 503 (633)
T PF05693_consen 428 NMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGC----DLGVFPSYYEPWGYTPLECTAFGVPSITTNLSG 503 (633)
T ss_dssp HHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHS----SEEEE--SSBSS-HHHHHHHHTT--EEEETTBH
T ss_pred HHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccC----ceeeeccccccccCChHHHhhcCCceeeccchh
Confidence 2233333321 1 222 2223222 578999999 999999999999999999999999999999877
Q ss_pred cccceee-----CCceEEe-C--CCCHH----HHHHHHHHHHh-CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Q 001557 602 PVDIHRV-----LDNGLLV-D--PHDQQ----SIADALLKLVS-DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCK 668 (1054)
Q Consensus 602 ~~eiv~~-----~~~Gllv-~--p~d~~----~la~aI~~ll~-d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~~ 668 (1054)
+-..+.. ...|+.| + -.+.+ ++++.|.+... ++.++..+++++.+.....+|......|.+.+.-.+
T Consensus 504 FG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~AL 583 (633)
T PF05693_consen 504 FGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLAL 583 (633)
T ss_dssp HHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 7544432 3457755 2 23444 45555555555 566677778888777789999999999999988555
Q ss_pred h
Q 001557 669 Q 669 (1054)
Q Consensus 669 ~ 669 (1054)
.
T Consensus 584 ~ 584 (633)
T PF05693_consen 584 R 584 (633)
T ss_dssp H
T ss_pred H
Confidence 4
No 132
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=99.58 E-value=1.3e-13 Score=169.42 Aligned_cols=330 Identities=18% Similarity=0.223 Sum_probs=220.0
Q ss_pred CcceEEEEcCCCchHHHH-----HHHcc----------CCCCEEEEeCCCccchHHH----HH--------H-hCCCChh
Q 001557 305 IWPVAIHGHYADAGDAAA-----LLSGA----------LNVPMVFTGHSLGRDKLEQ----LL--------K-QGRLSRD 356 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~-----~l~~~----------~~iP~V~t~H~l~~~~~~~----l~--------~-~g~~~~~ 356 (1054)
..|||||+|.+.+++++. ++... ....+|||.|++.+...+. ++ . .| ++..
T Consensus 247 ~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~lg-l~~~ 325 (778)
T cd04299 247 IKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARELG-LSRD 325 (778)
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHcC-CCHH
Confidence 469999999999988887 44321 1467899999986654221 11 0 11 1111
Q ss_pred hhhhHhHHH-----HHHHHHHhhhccCCEEEecCHHH---HHHHHhh-hcCCChHHHHHHHHhHhcccccCCCCCCcEEE
Q 001557 357 EINTTYKIM-----RRIEAEELSLDASEIVITSTRQE---IEEQWRL-YDGFDPVLERKLRARIKRGVSCHGRFMPRMVV 427 (1054)
Q Consensus 357 ~i~~~~~~~-----~ri~~E~~~l~~ad~Vi~~S~~~---~~~~~~~-y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~v 427 (1054)
.+....... ..+..-+.++..|+.|.++|+-. .++++.. ++++.. ...++.-
T Consensus 326 ~~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~~~~g~p~-------------------~~~~i~~ 386 (778)
T cd04299 326 RFLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAGLWPGFPV-------------------EEVPIGH 386 (778)
T ss_pred HHhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhhhhccCCc-------------------ccCceec
Confidence 110000000 01233456899999999999866 3333322 332211 1126889
Q ss_pred eCCCCcCCCcc-cCCCCCCCcccccC---------------CCCCCCCCchhH-------HHhhh---------------
Q 001557 428 IPPGIEFHHIV-RHNGDVDGEVERDE---------------GSPASPDPPIWS-------EIMHF--------------- 469 (1054)
Q Consensus 428 IPnGID~~~f~-~~~~~~~~~~~~~~---------------~~~~~~~~~~~~-------~~~~~--------------- 469 (1054)
|-|||+...+. |.... .+.++. ....-.+...|+ .+.++
T Consensus 387 ITNGVh~~~W~~P~~~~---l~~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~ 463 (778)
T cd04299 387 VTNGVHVPTWVAPEMRE---LYDRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGAS 463 (778)
T ss_pred eeCCcchhhhcCHHHHH---HHHHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCc
Confidence 99999999887 42100 110000 000001111121 11111
Q ss_pred ---------cCCCCCcEEEEEeCCCCCCCHHHHHHHHHhccccc--CCCcEEE-EEecCCCchhhhhchHHHHHHHHHHH
Q 001557 470 ---------FSNPRKPMILALARPDPKKNITTLVKAFGECRPLR--ELANLTL-IMGNRDDIDEMSGTNAALLLSILKLI 537 (1054)
Q Consensus 470 ---------~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~--~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~ 537 (1054)
..+|+.++|+++.|+...|+.++++..+.++.++- +...+++ ++|.....++. ..++...|..+.
T Consensus 464 ~~~~~~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~~---gK~iIk~i~~~a 540 (778)
T cd04299 464 AEEIGEADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADEP---GKELIQEIVEFS 540 (778)
T ss_pred hhhhhhcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccchH---HHHHHHHHHHHH
Confidence 14577789999999999999999999988885422 2234555 55665433332 356778888888
Q ss_pred HHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC--CCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEe
Q 001557 538 DKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLV 615 (1054)
Q Consensus 538 ~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~--~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv 615 (1054)
+.....++|.|+-..+-+--..+++.| ||+++||+ .|++|++-+-||..|.+-+++..|...|-. ++.||+.+
T Consensus 541 ~~p~~~~kVvfle~Yd~~lA~~LvaG~----DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwai 615 (778)
T cd04299 541 RRPEFRGRIVFLEDYDMALARHLVQGV----DVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAI 615 (778)
T ss_pred hCcCCCCcEEEEcCCCHHHHHHHHhhh----hhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEe
Confidence 877777888887776554445667777 99999999 999999999999999999999999999987 78999999
Q ss_pred CC------------CCHHHHHHHHHHHHh----C------HHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 001557 616 DP------------HDQQSIADALLKLVS----D------KQLWERCRQNGLKNI-HQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 616 ~p------------~d~~~la~aI~~ll~----d------~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~ 665 (1054)
.+ .|.++|-+.|++.+. + |..|.++.++++..+ -.|||..++++|.+.+.
T Consensus 616 g~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 616 GDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred CCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 87 566777777765443 3 778999999999998 69999999999998876
No 133
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.50 E-value=5.7e-13 Score=159.39 Aligned_cols=166 Identities=13% Similarity=0.182 Sum_probs=139.9
Q ss_pred EEEEEe--CCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCC----------
Q 001557 477 MILALA--RPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLY---------- 543 (1054)
Q Consensus 477 ~Il~vg--Rld~~Kgi~~ll~A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~---------- 543 (1054)
.+++++ |+ +.|.++.+|+|+..+.. ..|++.| +.|-+.+ . +....++++++++++.
T Consensus 321 ~~I~v~idrL-~ek~~~~~I~av~~~~~--~~p~~~L~~~gy~~~-~-------~~~~~l~~~i~~~~~~~~~~~~~~~~ 389 (519)
T TIGR03713 321 TEIGFWIDGL-SDEELQQILQQLLQYIL--KNPDYELKILTYNND-N-------DITQLLEDILEQINEEYNQDKNFFSL 389 (519)
T ss_pred eEEEEEcCCC-ChHHHHHHHHHHHHHHh--hCCCeEEEEEEecCc-h-------hHHHHHHHHHHHHHhhhchhhhcccc
Confidence 466666 99 99999999999999964 4455555 3565542 1 1234555555665554
Q ss_pred -------------------CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCccc
Q 001557 544 -------------------GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD 604 (1054)
Q Consensus 544 -------------------~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~e 604 (1054)
..|.|.|.++..++...|..| .++|.+|..|+|+ +++||+++|+|+| +-|+.+
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~a----rl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~ 461 (519)
T TIGR03713 390 SEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKL----RLIIDLSKEPDLY-TQISGISAGIPQI---NKVETD 461 (519)
T ss_pred chhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhh----eEEEECCCCCChH-HHHHHHHcCCCee---ecCCce
Confidence 689999998777999999999 9999999999999 9999999999999 667799
Q ss_pred ceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 001557 605 IHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSR 663 (1054)
Q Consensus 605 iv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~ 663 (1054)
+|.++.||++| +|..+|++||..+|.+++.|+++...+.+.++.||-+.+++++.+.
T Consensus 462 ~V~d~~NG~li--~d~~~l~~al~~~L~~~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 462 YVEHNKNGYII--DDISELLKALDYYLDNLKNWNYSLAYSIKLIDDYSSENIIERLNEL 518 (519)
T ss_pred eeEcCCCcEEe--CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHhh
Confidence 99999999999 4999999999999999999999999999999999999999887664
No 134
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.37 E-value=7e-13 Score=130.65 Aligned_cols=131 Identities=31% Similarity=0.448 Sum_probs=93.1
Q ss_pred CcEEEEEeCCCCCCCHHHHHH-HHHhcccccCCCcEEE-EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCC
Q 001557 475 KPMILALARPDPKKNITTLVK-AFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHH 552 (1054)
Q Consensus 475 ~~~Il~vgRld~~Kgi~~ll~-A~~~l~~~~~~~~l~L-IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~ 552 (1054)
.++|+++|++.+.|+++.+++ |+.++.+.. +++.| |+|++++ . +.++ ..++|.|+|++
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~--p~~~l~i~G~~~~--~-----------l~~~-----~~~~v~~~g~~ 61 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKH--PDIELIIIGNGPD--E-----------LKRL-----RRPNVRFHGFV 61 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHS--TTEEEEEECESS---H-----------HCCH-----HHCTEEEE-S-
T ss_pred cccccccccccccccccchhhhHHHHHHHHC--cCEEEEEEeCCHH--H-----------HHHh-----cCCCEEEcCCH
Confidence 467999999999999999999 999996544 55665 7788654 1 1122 23589999998
Q ss_pred CCCcHHHHHHHhhcCCcEEEecCC-CCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHH
Q 001557 553 KQSDVPDIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLV 631 (1054)
Q Consensus 553 ~~~dl~~ly~~Aa~~~dv~v~ps~-~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll 631 (1054)
+++.++|+.| |++|+|+. .++++.+++|||++|+|||+++. +..+++.....|+++ ++|+++++++|.+++
T Consensus 62 --~e~~~~l~~~----dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 62 --EELPEILAAA----DVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp --HHHHHHHHC-----SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred --HHHHHHHHhC----CEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 5899999999 99999985 78999999999999999999999 566777656778888 889999999999998
Q ss_pred hC
Q 001557 632 SD 633 (1054)
Q Consensus 632 ~d 633 (1054)
+|
T Consensus 134 ~d 135 (135)
T PF13692_consen 134 ND 135 (135)
T ss_dssp H-
T ss_pred cC
Confidence 75
No 135
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.37 E-value=8.2e-11 Score=137.23 Aligned_cols=251 Identities=14% Similarity=-0.006 Sum_probs=148.6
Q ss_pred CcceEEEEcCCCc-hHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEe
Q 001557 305 IWPVAIHGHYADA-GDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 383 (1054)
Q Consensus 305 ~~pDVIh~h~~~a-~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~ 383 (1054)
.+||+|+++.... ....+..++.+|+|+|+.+. ..-+.+ .+. .. +...+.+|.|++
T Consensus 88 ~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~-P~~waw-----~~~--------~~---------r~l~~~~d~v~~ 144 (385)
T TIGR00215 88 AKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYIS-PQVWAW-----RKW--------RA---------KKIEKATDFLLA 144 (385)
T ss_pred cCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeC-CcHhhc-----Ccc--------hH---------HHHHHHHhHhhc
Confidence 6799999988522 33344466778999997653 110000 000 01 123567999999
Q ss_pred cCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchh
Q 001557 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIW 463 (1054)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1054)
+++.+.+.+. .+.. ++.++.|++-..... . .+...
T Consensus 145 ~~~~e~~~~~-~~g~-------------------------~~~~vGnPv~~~~~~-~------------------~~~~~ 179 (385)
T TIGR00215 145 ILPFEKAFYQ-KKNV-------------------------PCRFVGHPLLDAIPL-Y------------------KPDRK 179 (385)
T ss_pred cCCCcHHHHH-hcCC-------------------------CEEEECCchhhhccc-c------------------CCCHH
Confidence 9987655432 1111 566677776221110 0 00111
Q ss_pred HHHhhhcCCCCCcEEEEE--eCCCC-CCCHHHHHHHHHhcccccCCCcEEE-E-EecCCCchhhhhchHHHHHHHHHHHH
Q 001557 464 SEIMHFFSNPRKPMILAL--ARPDP-KKNITTLVKAFGECRPLRELANLTL-I-MGNRDDIDEMSGTNAALLLSILKLID 538 (1054)
Q Consensus 464 ~~~~~~~~~~~~~~Il~v--gRld~-~Kgi~~ll~A~~~l~~~~~~~~l~L-I-iG~~~~~~~~~~~~~~~~~~i~~l~~ 538 (1054)
..+.++..++++++|+.+ +|..+ .|++..+++|+..+.+.. +++.+ + +++... ...+.++..
T Consensus 180 ~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~--p~~~~vi~~~~~~~-----------~~~~~~~~~ 246 (385)
T TIGR00215 180 SAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQE--PDLRRVLPVVNFKR-----------RLQFEQIKA 246 (385)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhC--CCeEEEEEeCCchh-----------HHHHHHHHH
Confidence 223345555677887766 37776 789999999999886433 45543 3 333322 123344445
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcc-ccC----------------
Q 001557 539 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK-NGG---------------- 601 (1054)
Q Consensus 539 ~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~-~Gg---------------- 601 (1054)
.+++...|.+... +...+|++| |++|.+| |.+.+|+|++|+|+|... ...
T Consensus 247 ~~~~~~~v~~~~~----~~~~~l~aA----Dl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~ 313 (385)
T TIGR00215 247 EYGPDLQLHLIDG----DARKAMFAA----DAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYIS 313 (385)
T ss_pred HhCCCCcEEEECc----hHHHHHHhC----CEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeee
Confidence 5554445655432 677899999 9999999 777779999999988872 111
Q ss_pred cccceeeCCce-EEe-CCCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHHh
Q 001557 602 PVDIHRVLDNG-LLV-DPHDQQSIADALLKLVSDK----QLWERCRQNGLKNIH 649 (1054)
Q Consensus 602 ~~eiv~~~~~G-llv-~p~d~~~la~aI~~ll~d~----~~~~~~~~~~~~~v~ 649 (1054)
.+.++.+..-. .++ +--+++.|++++.+++.|+ +.++++.+...+..+
T Consensus 314 ~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 367 (385)
T TIGR00215 314 LPNILANRLLVPELLQEECTPHPLAIALLLLLENGLKAYKEMHRERQFFEELRQ 367 (385)
T ss_pred ccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHH
Confidence 11112111111 111 2346889999999999999 877777766655543
No 136
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.26 E-value=1.2e-10 Score=118.28 Aligned_cols=250 Identities=14% Similarity=0.112 Sum_probs=148.5
Q ss_pred CEEEEEEecCCC-C-hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEcCC
Q 001557 769 KYVFVIAADCDT-T-SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPS 846 (1054)
Q Consensus 769 kkLiv~DiDGTL-~-~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~~~ 846 (1054)
.++||+|+|||| . .--.+.....+..|++. |+.||+||.-+..++..+-+.++++ +-.+|++||+.||-+.
T Consensus 7 ~~lIFtDlD~TLl~~~ye~~pA~pv~~el~d~----G~~Vi~~SSKT~aE~~~l~~~l~v~---~~p~iaEnG~aI~~p~ 79 (274)
T COG3769 7 PLLIFTDLDGTLLPHSYEWQPAAPVLLELKDA----GVPVILCSSKTRAEMLYLQKSLGVQ---GLPLIAENGAAIYLPK 79 (274)
T ss_pred ceEEEEcccCcccCCCCCCCccchHHHHHHHc----CCeEEEeccchHHHHHHHHHhcCCC---CCceeecCCceEEecc
Confidence 389999999999 2 22334445667777776 9999999999999999999999996 2469999999999775
Q ss_pred CCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhccC---CCCccCccccc--c-c------ccCcceEEEEEe
Q 001557 847 SSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVND---KKGEEGKIVEE--D-E------SRSTIHCYAFEV 914 (1054)
Q Consensus 847 ~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~---~~~~~~~~v~~--~-~------~~~~~~kis~~~ 914 (1054)
++.......... .+ ..|++-.-.-+.+++.+.++.....- .+.+. ..+.+ . . ...+.+..+.+-
T Consensus 80 ~~~~~~~~~r~~--~g-~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~-~ei~e~TGlpre~aaLa~~rEyseti~~ 155 (274)
T COG3769 80 GWFPFDGKPREI--SG-ISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDD-EEIAEWTGLPREQAALAMLREYSETIIW 155 (274)
T ss_pred cccccCCCCcee--cc-eEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCH-HHHHHHhCCChHHhHHHHHHHhhhheee
Confidence 432110000000 00 11122222223344333333221110 00000 00000 0 0 000112222222
Q ss_pred cCCCCCccHHHHHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHh-CCCccCEEEEeCcCCCccccccccC
Q 001557 915 TNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRW-GIDLSNVVVIAGECGDTDYEGLLGG 993 (1054)
Q Consensus 915 ~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~-gI~~e~vvaf~GD~~d~D~~eML~~ 993 (1054)
.+.+ .....+...|...+ +.+.++..+.-|+...+.||+|+..|.+-+ -.+...+.+..||+.| | .+||+.
T Consensus 156 rs~d--~~~~~~~~~L~e~g----lt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~~r~t~~~GDg~n-D-~Pl~ev 227 (274)
T COG3769 156 RSSD--ERMAQFTARLNERG----LTFVHGARFWHVLDASAGKGQAANWLLETYRRLGGARTTLGLGDGPN-D-APLLEV 227 (274)
T ss_pred cccc--hHHHHHHHHHHhcC----ceEEeccceEEEeccccCccHHHHHHHHHHHhcCceeEEEecCCCCC-c-ccHHHh
Confidence 2222 23345666666654 356666668899999999999999987764 4455554555999999 9 999999
Q ss_pred cceEEEecCcchhHHhhhhccCCCcccccccCCCceEEeccccCHHHHHHHHHHhc
Q 001557 994 VHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLG 1049 (1054)
Q Consensus 994 ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~~~gI~~al~~~~ 1049 (1054)
..+.++++|-...-..++... |-+...++.-..+|..++|+||.
T Consensus 228 ~d~AfiV~~lnre~~~lv~~i------------~~vv~~~~~~~~~~~~e~~~~~~ 271 (274)
T COG3769 228 MDYAFIVKGLNREGVHLVSSI------------PAVVERIQREGPEGWREGLDHFF 271 (274)
T ss_pred hhhheeecccchhhhhccccc------------hhheeeccccCchHHHHHhhhhc
Confidence 999999997761111122111 23334556777899999999974
No 137
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.24 E-value=2.8e-11 Score=121.55 Aligned_cols=160 Identities=29% Similarity=0.387 Sum_probs=87.2
Q ss_pred CcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCccccc
Q 001557 191 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQK 270 (1054)
Q Consensus 191 GG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~k 270 (1054)
||.++++.+|+++|++. | |+|+|+++..... ... ....++.+.++|+.+.....
T Consensus 1 GG~~~~~~~l~~~L~~~-G-~~V~v~~~~~~~~-------~~~---------------~~~~~~~~~~~~~~~~~~~~-- 54 (160)
T PF13579_consen 1 GGIERYVRELARALAAR-G-HEVTVVTPQPDPE-------DDE---------------EEEDGVRVHRLPLPRRPWPL-- 54 (160)
T ss_dssp SHHHHHHHHHHHHHHHT-T--EEEEEEE---GG-------G-S---------------EEETTEEEEEE--S-SSSGG--
T ss_pred CCHHHHHHHHHHHHHHC-C-CEEEEEecCCCCc-------ccc---------------cccCCceEEeccCCccchhh--
Confidence 79999999999999999 8 9999999753211 000 11258999999976552100
Q ss_pred ccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHh
Q 001557 271 ELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQ 350 (1054)
Q Consensus 271 ~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~ 350 (1054)
..+ .+...+ .+.+ .....+||+||+|++.++.++.++++..++|+|++.|+........
T Consensus 55 -~~~----~~~~~~-------~~~l-----~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~---- 113 (160)
T PF13579_consen 55 -RLL----RFLRRL-------RRLL-----AARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRRGSR---- 113 (160)
T ss_dssp -GHC----CHHHHH-------HHHC-----HHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T----------
T ss_pred -hhH----HHHHHH-------HHHH-----hhhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhhccc----
Confidence 011 111111 1111 0012569999999976666676666577999999999854322100
Q ss_pred CCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCC
Q 001557 351 GRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPP 430 (1054)
Q Consensus 351 g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPn 430 (1054)
....+.++ .|+..++.||.|+++|+...+.+.. +. ..+ +++.||||
T Consensus 114 ---------~~~~~~~~--~~~~~~~~ad~vi~~S~~~~~~l~~-~g-~~~---------------------~ri~vipn 159 (160)
T PF13579_consen 114 ---------WKRRLYRW--LERRLLRRADRVIVVSEAMRRYLRR-YG-VPP---------------------DRIHVIPN 159 (160)
T ss_dssp ---------HHHHHHHH--HHHHHHHH-SEEEESSHHHHHHHHH-H----G---------------------GGEEE---
T ss_pred ---------hhhHHHHH--HHHHHHhcCCEEEECCHHHHHHHHH-hC-CCC---------------------CcEEEeCc
Confidence 11122233 2677899999999999998887766 43 222 39999999
Q ss_pred C
Q 001557 431 G 431 (1054)
Q Consensus 431 G 431 (1054)
|
T Consensus 160 G 160 (160)
T PF13579_consen 160 G 160 (160)
T ss_dssp -
T ss_pred C
Confidence 8
No 138
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=99.24 E-value=3.5e-11 Score=110.64 Aligned_cols=91 Identities=18% Similarity=0.359 Sum_probs=86.0
Q ss_pred EEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-
Q 001557 570 VFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNI- 648 (1054)
Q Consensus 570 v~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v- 648 (1054)
++|+|+..++++..++|+||||+|||++..++..+++.++.+++.++ |++++.++|..+++||++++++++++++.+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~~~~~~~ia~~a~~~v~ 78 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLENPEERRRIAKNARERVL 78 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999999888999998 999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHH
Q 001557 649 HQFSWPEHCKSYLS 662 (1054)
Q Consensus 649 ~~fsw~~~a~~yl~ 662 (1054)
++|+|++.++++++
T Consensus 79 ~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 79 KRHTWEHRAEQILE 92 (92)
T ss_pred HhCCHHHHHHHHHC
Confidence 69999999999874
No 139
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.23 E-value=9.9e-09 Score=118.24 Aligned_cols=329 Identities=10% Similarity=0.108 Sum_probs=184.4
Q ss_pred CCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCccc
Q 001557 189 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYV 268 (1054)
Q Consensus 189 ~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l 268 (1054)
-|||+..-...+++.|.+. | |+|.++++.. +...+.+ ...|+.++.++..+.
T Consensus 10 GTGGHi~Pala~a~~l~~~-g-~~v~~vg~~~---------~~e~~l~-------------~~~g~~~~~~~~~~l---- 61 (352)
T PRK12446 10 GSAGHVTPNLAIIPYLKED-N-WDISYIGSHQ---------GIEKTII-------------EKENIPYYSISSGKL---- 61 (352)
T ss_pred CcHHHHHHHHHHHHHHHhC-C-CEEEEEECCC---------ccccccC-------------cccCCcEEEEeccCc----
Confidence 3799999999999999998 8 9999998642 1111111 123566666664332
Q ss_pred ccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHH
Q 001557 269 QKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLL 348 (1054)
Q Consensus 269 ~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~ 348 (1054)
.+...+..+ .+.-.++....+..+.+.+ .+||+||++...++..+.+.++.+++|+++.-.+.....
T Consensus 62 ~~~~~~~~~-~~~~~~~~~~~~~~~i~~~-------~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~g~----- 128 (352)
T PRK12446 62 RRYFDLKNI-KDPFLVMKGVMDAYVRIRK-------LKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTPGL----- 128 (352)
T ss_pred CCCchHHHH-HHHHHHHHHHHHHHHHHHh-------cCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCccH-----
Confidence 111111111 1222222333333333333 789999998766666677888889999987665542211
Q ss_pred HhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEe
Q 001557 349 KQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVI 428 (1054)
Q Consensus 349 ~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vI 428 (1054)
..+ ...+.++.|+++-+.... .++ + .++.+.
T Consensus 129 ----------------~nr-----~~~~~a~~v~~~f~~~~~----~~~---~---------------------~k~~~t 159 (352)
T PRK12446 129 ----------------ANK-----IALRFASKIFVTFEEAAK----HLP---K---------------------EKVIYT 159 (352)
T ss_pred ----------------HHH-----HHHHhhCEEEEEccchhh----hCC---C---------------------CCeEEE
Confidence 111 246678888776532211 111 1 166777
Q ss_pred CCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHH-HHHHHhcccccCCC
Q 001557 429 PPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTL-VKAFGECRPLRELA 507 (1054)
Q Consensus 429 PnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~l-l~A~~~l~~~~~~~ 507 (1054)
.|.|..+..... .......+...+++|+||.+|.---.+.+..+ .+++..+. ...
T Consensus 160 G~Pvr~~~~~~~---------------------~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~---~~~ 215 (352)
T PRK12446 160 GSPVREEVLKGN---------------------REKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELL---LKY 215 (352)
T ss_pred CCcCCccccccc---------------------chHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhc---cCc
Confidence 666654332110 01112233345678888887764444555433 33444442 224
Q ss_pred cEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHH
Q 001557 508 NLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEA 587 (1054)
Q Consensus 508 ~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EA 587 (1054)
+++++.|..+ .+. .. ..+ ..+...+++ .++++++|+.| |++|.- +-+.|+.|+
T Consensus 216 ~vv~~~G~~~-~~~-----------~~---~~~---~~~~~~~f~-~~~m~~~~~~a----dlvIsr----~G~~t~~E~ 268 (352)
T PRK12446 216 QIVHLCGKGN-LDD-----------SL---QNK---EGYRQFEYV-HGELPDILAIT----DFVISR----AGSNAIFEF 268 (352)
T ss_pred EEEEEeCCch-HHH-----------HH---hhc---CCcEEecch-hhhHHHHHHhC----CEEEEC----CChhHHHHH
Confidence 4544556542 211 11 111 122333442 25799999999 988854 457899999
Q ss_pred HHcCCCEEEcccc-Cc---cc-----ceeeCCceEEeCCC--CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHH
Q 001557 588 AAYGLPIVATKNG-GP---VD-----IHRVLDNGLLVDPH--DQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEH 656 (1054)
Q Consensus 588 mA~G~PVIat~~G-g~---~e-----iv~~~~~Gllv~p~--d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~ 656 (1054)
+++|+|+|.-... .+ .+ .+...+.|..+... +++.++++|.+++.|++.+++ ..+.+....-
T Consensus 269 ~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~~~~~-------~~~~~~~~~a 341 (352)
T PRK12446 269 LTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHNNEKYKT-------ALKKYNGKEA 341 (352)
T ss_pred HHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCHHHHHH-------HHHHcCCCCH
Confidence 9999999988642 11 11 22333456666432 578999999999988765432 2233444455
Q ss_pred HHHHHHHHH
Q 001557 657 CKSYLSRIS 665 (1054)
Q Consensus 657 a~~yl~~l~ 665 (1054)
++++.+.+.
T Consensus 342 a~~i~~~i~ 350 (352)
T PRK12446 342 IQTIIDHIS 350 (352)
T ss_pred HHHHHHHHH
Confidence 555555543
No 140
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.21 E-value=1.2e-08 Score=116.72 Aligned_cols=330 Identities=17% Similarity=0.133 Sum_probs=197.2
Q ss_pred CCCcHhHHHHHHHHHHhcCCCceE-EEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCcc
Q 001557 189 DTGGQVKYVVELARALGSMPGVYR-VDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKY 267 (1054)
Q Consensus 189 ~tGG~~~~v~eLa~aLa~~~Gv~~-V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~ 267 (1054)
-|||+..-...|+++|.++ | ++ |.++.... +.. .......++.+..++.++..++
T Consensus 9 GTGGHv~pAlAl~~~l~~~-g-~~~v~~~~~~~---------~~e-------------~~l~~~~~~~~~~I~~~~~~~~ 64 (357)
T COG0707 9 GTGGHVFPALALAEELAKR-G-WEQVIVLGTGD---------GLE-------------AFLVKQYGIEFELIPSGGLRRK 64 (357)
T ss_pred CCccchhHHHHHHHHHHhh-C-ccEEEEecccc---------cce-------------eeeccccCceEEEEeccccccc
Confidence 3699999999999999999 8 74 55552210 000 0111223788888888654322
Q ss_pred cccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHH
Q 001557 268 VQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQL 347 (1054)
Q Consensus 268 l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l 347 (1054)
..+..+.. .-..+.-+.+..+.|.+ .+||+|.+........+.+.+..+++|+++.-.+.......
T Consensus 65 ----~~~~~~~~-~~~~~~~~~~a~~il~~-------~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~G~an-- 130 (357)
T COG0707 65 ----GSLKLLKA-PFKLLKGVLQARKILKK-------LKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVPGLAN-- 130 (357)
T ss_pred ----CcHHHHHH-HHHHHHHHHHHHHHHHH-------cCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCcchhH--
Confidence 22221111 12233344444455554 78999999877666677777888899999998887544321
Q ss_pred HHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEE
Q 001557 348 LKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVV 427 (1054)
Q Consensus 348 ~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~v 427 (1054)
++ ..+.|+.|.+.-+. .. .+ + ...++.+
T Consensus 131 ---------------k~---------~~~~a~~V~~~f~~-~~----~~--~---------------------~~~~~~~ 158 (357)
T COG0707 131 ---------------KI---------LSKFAKKVASAFPK-LE----AG--V---------------------KPENVVV 158 (357)
T ss_pred ---------------HH---------hHHhhceeeecccc-cc----cc--C---------------------CCCceEE
Confidence 11 24567777665432 11 11 0 1115667
Q ss_pred eCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC
Q 001557 428 IPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA 507 (1054)
Q Consensus 428 IPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~ 507 (1054)
..+.|..+.+. .... ..++....++++|+.+|.---.+.+..++....... .+..
T Consensus 159 tG~Pvr~~~~~-~~~~----------------------~~~~~~~~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l--~~~~ 213 (357)
T COG0707 159 TGIPVRPEFEE-LPAA----------------------EVRKDGRLDKKTILVTGGSQGAKALNDLVPEALAKL--ANRI 213 (357)
T ss_pred ecCcccHHhhc-cchh----------------------hhhhhccCCCcEEEEECCcchhHHHHHHHHHHHHHh--hhCe
Confidence 77766655443 1100 011111237888888876433333444443332221 1122
Q ss_pred cEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHH
Q 001557 508 NLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEA 587 (1054)
Q Consensus 508 ~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EA 587 (1054)
++..+.|... +.++.....+++. +...++ .++++.+|++| |++|.= +-++|+.|.
T Consensus 214 ~v~~~~G~~~------------~~~~~~~~~~~~~---~~v~~f--~~dm~~~~~~A----DLvIsR----aGa~Ti~E~ 268 (357)
T COG0707 214 QVIHQTGKND------------LEELKSAYNELGV---VRVLPF--IDDMAALLAAA----DLVISR----AGALTIAEL 268 (357)
T ss_pred EEEEEcCcch------------HHHHHHHHhhcCc---EEEeeH--HhhHHHHHHhc----cEEEeC----CcccHHHHH
Confidence 3323344432 2344445555544 666666 46899999999 998854 447999999
Q ss_pred HHcCCCEEEccccCcc--------cceeeCCceEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHH
Q 001557 588 AAYGLPIVATKNGGPV--------DIHRVLDNGLLVDPHD--QQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHC 657 (1054)
Q Consensus 588 mA~G~PVIat~~Gg~~--------eiv~~~~~Gllv~p~d--~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a 657 (1054)
.++|+|+|--..+... ..+++...|++++..+ ++.+.+.|.+++++|+..++|.+++++....-.-..++
T Consensus 269 ~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~~m~~~a~~~~~p~aa~~i~ 348 (357)
T COG0707 269 LALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSNPEKLKAMAENAKKLGKPDAAERIA 348 (357)
T ss_pred HHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 9999999987754431 1233445677777555 88999999999999999999998888775443433333
Q ss_pred H
Q 001557 658 K 658 (1054)
Q Consensus 658 ~ 658 (1054)
+
T Consensus 349 ~ 349 (357)
T COG0707 349 D 349 (357)
T ss_pred H
Confidence 3
No 141
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.19 E-value=2.2e-10 Score=117.01 Aligned_cols=169 Identities=21% Similarity=0.265 Sum_probs=85.2
Q ss_pred CCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCcc
Q 001557 188 SDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKY 267 (1054)
Q Consensus 188 ~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~ 267 (1054)
+..||.++++.+|+++|+++ | |+|++++.....+... .........+....
T Consensus 9 ~~~GG~e~~~~~l~~~l~~~-G-~~v~v~~~~~~~~~~~------------------------~~~~~~~~~~~~~~--- 59 (177)
T PF13439_consen 9 PNIGGAERVVLNLARALAKR-G-HEVTVVSPGVKDPIEE------------------------ELVKIFVKIPYPIR--- 59 (177)
T ss_dssp TSSSHHHHHHHHHHHHHHHT-T--EEEEEESS-TTS-SS------------------------TEEEE---TT-SST---
T ss_pred CCCChHHHHHHHHHHHHHHC-C-CEEEEEEcCCCccchh------------------------hccceeeeeecccc---
Confidence 56799999999999999999 8 9999998753221110 00111111111100
Q ss_pred cccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHH
Q 001557 268 VQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQL 347 (1054)
Q Consensus 268 l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l 347 (1054)
...... ......+.+.+.+ .+|||||+|.+.....+..... ++|+|+|.|+..... .
T Consensus 60 ------~~~~~~-----~~~~~~~~~~i~~-------~~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~~---~ 116 (177)
T PF13439_consen 60 ------KRFLRS-----FFFMRRLRRLIKK-------EKPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFER---R 116 (177)
T ss_dssp ------SS--HH-----HHHHHHHHHHHHH-------HT-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH--H---H
T ss_pred ------cccchh-----HHHHHHHHHHHHH-------cCCCeEEecccchhHHHHHhcc--CCCEEEEeCCCcccc---c
Confidence 001111 1112223333333 3599999998644333332222 999999999875320 0
Q ss_pred HHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEE
Q 001557 348 LKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVV 427 (1054)
Q Consensus 348 ~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~v 427 (1054)
........ ...+..+ .+...++.+|.++|+|+...+++.+ |+. . ..++.|
T Consensus 117 ~~~~~~~~-----~~~~~~~--~~~~~~~~~~~ii~vS~~~~~~l~~-~~~-~---------------------~~ki~v 166 (177)
T PF13439_consen 117 FLKSKLSP-----YSYLNFR--IERKLYKKADRIIAVSESTKDELIK-FGI-P---------------------PEKIHV 166 (177)
T ss_dssp TTTTSCCC-----HHHHHHC--TTHHHHCCSSEEEESSHHHHHHHHH-HT------------------------SS-EEE
T ss_pred ccccccch-----hhhhhhh--hhhhHHhcCCEEEEECHHHHHHHHH-hCC-c---------------------ccCCEE
Confidence 00000000 0111111 1334588999999999998888766 542 1 138999
Q ss_pred eCCCCcCCCcc
Q 001557 428 IPPGIEFHHIV 438 (1054)
Q Consensus 428 IPnGID~~~f~ 438 (1054)
||||||.+.|.
T Consensus 167 I~ngid~~~F~ 177 (177)
T PF13439_consen 167 IYNGIDTDRFR 177 (177)
T ss_dssp ----B-CCCH-
T ss_pred EECCccHHHcC
Confidence 99999999873
No 142
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=99.12 E-value=4.5e-11 Score=130.45 Aligned_cols=214 Identities=19% Similarity=0.143 Sum_probs=111.6
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccc-----
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNT----- 241 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~----- 241 (1054)
||++||.... |+ ..+||...++..|+++|+++ | ++|.|+++.+...........+...+.....
T Consensus 1 kIl~vt~E~~----P~-----~k~GGLgdv~~~L~kaL~~~-G-~~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~v~~ 69 (245)
T PF08323_consen 1 KILMVTSEYA----PF-----AKVGGLGDVVGSLPKALAKQ-G-HDVRVIMPKYGFIDEEYFQLEPVRRLSVPFGGPVPV 69 (245)
T ss_dssp EEEEE-S-BT----TT-----B-SSHHHHHHHHHHHHHHHT-T--EEEEEEE-THHHHHHCTTEEEEEEES-STTCEEEE
T ss_pred CEEEEEcccC----cc-----cccCcHhHHHHHHHHHHHhc-C-CeEEEEEccchhhhhhhhcceEEEEecccccccccc
Confidence 7999998654 22 58999999999999999999 8 9999999865321100000000000000000
Q ss_pred ---cccccccCCCCCeEEEEccCCCCCcccccccCCCC-hHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCc
Q 001557 242 ---ENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPH-IPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADA 317 (1054)
Q Consensus 242 ---~~~~~~~~~~~g~~i~rip~g~~~~~l~k~~l~~~-l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a 317 (1054)
..+.-.....+|+.++.+... .|..+..++.. ...+.+.+.++.. ++++..+.+... ..+|||||+|+|.+
T Consensus 70 ~~~~~~~v~~~~~~~v~v~~i~~~---~~f~r~~iY~~~~~~~~d~~~rf~~-fs~a~le~~~~l-~~~pDIIH~hDW~t 144 (245)
T PF08323_consen 70 GVWYEVRVYRYPVDGVPVYFIDNP---EYFDRPGIYGDNGGDYPDNAERFAF-FSRAALELLKKL-GWKPDIIHCHDWHT 144 (245)
T ss_dssp E----EEEEEEEETTEEEEEEESH---HHHGSSSSSBSTSSBHTTHHHHHHH-HHHHHHHHHCTC-T-S-SEEEEECGGG
T ss_pred ccceEEEEEEEEcCCccEEEecCh---hhccccceeccCCCcchhHHHHHHH-HHHHHHHHHHhh-CCCCCEEEecCchH
Confidence 000000011257777776643 23333333321 0123344444442 345555544442 24699999999999
Q ss_pred hHHHHHHHccC-------CCCEEEEeCCCccchHHHH--HHhCCCChhhh--hhHhHHHHHHHHHHhhhccCCEEEecCH
Q 001557 318 GDAAALLSGAL-------NVPMVFTGHSLGRDKLEQL--LKQGRLSRDEI--NTTYKIMRRIEAEELSLDASEIVITSTR 386 (1054)
Q Consensus 318 ~~~a~~l~~~~-------~iP~V~t~H~l~~~~~~~l--~~~g~~~~~~i--~~~~~~~~ri~~E~~~l~~ad~Vi~~S~ 386 (1054)
++++.++.... ++|+|+|+|++..+..... +..-.++.... ...+.....+...+..+..||.|+|+|+
T Consensus 145 al~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi~~AD~v~TVS~ 224 (245)
T PF08323_consen 145 ALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGIVYADKVTTVSP 224 (245)
T ss_dssp TTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHHHHSSEEEESSH
T ss_pred HHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHHHhcCEeeeCCH
Confidence 99999988765 6999999999755432110 00000010000 0000000112223457999999999999
Q ss_pred HHHHHHHhhh
Q 001557 387 QEIEEQWRLY 396 (1054)
Q Consensus 387 ~~~~~~~~~y 396 (1054)
.+++++...+
T Consensus 225 ~Ya~Ei~~~~ 234 (245)
T PF08323_consen 225 TYAREIQTPE 234 (245)
T ss_dssp HHHHHTTSHH
T ss_pred HHHHHHhCcc
Confidence 9999876654
No 143
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=99.05 E-value=2.3e-08 Score=117.37 Aligned_cols=192 Identities=14% Similarity=0.236 Sum_probs=139.3
Q ss_pred ccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCC
Q 001557 376 DASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSP 455 (1054)
Q Consensus 376 ~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~ 455 (1054)
...|.||++|+++.+.+..+++.. .++.+||-|+=+. +. ..
T Consensus 238 ~~~~~iIv~T~~q~~di~~r~~~~-----------------------~~~~~ip~g~i~~-~~-~~-------------- 278 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKELLDNE-----------------------YQEQISQLGYLYP-FK-KD-------------- 278 (438)
T ss_pred cccCeEEeCCHHHHHHHHHHhCcc-----------------------cCceEEEEEEEEe-ec-cc--------------
Confidence 678999999987777666555421 1677888887522 11 00
Q ss_pred CCCCCchhHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHH
Q 001557 456 ASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILK 535 (1054)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~ 535 (1054)
+...+-++.++. ...|++++.+. ...|++.|-+|-+.+. -..+.+
T Consensus 279 ----------------~r~~~~~l~~t~-------s~~I~~i~~Lv--~~lPd~~f~Iga~te~----------s~kL~~ 323 (438)
T TIGR02919 279 ----------------NKYRKQALILTN-------SDQIEHLEEIV--QALPDYHFHIAALTEM----------SSKLMS 323 (438)
T ss_pred ----------------cCCcccEEEECC-------HHHHHHHHHHH--HhCCCcEEEEEecCcc----------cHHHHH
Confidence 122334666661 88999999885 4557777744666531 245556
Q ss_pred HHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccc-cCcccceeeCCceEE
Q 001557 536 LIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN-GGPVDIHRVLDNGLL 614 (1054)
Q Consensus 536 l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~-Gg~~eiv~~~~~Gll 614 (1054)
+ .++ .+.+.|++.. ..++.++|..| |++|.++..|+|++++.||+.+|+|||+.+. -|+.+++.+ |.+
T Consensus 324 L-~~y--~nvvly~~~~-~~~l~~ly~~~----dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l 392 (438)
T TIGR02919 324 L-DKY--DNVKLYPNIT-TQKIQELYQTC----DIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENI 392 (438)
T ss_pred H-Hhc--CCcEEECCcC-hHHHHHHHHhc----cEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---Cce
Confidence 6 666 4566666664 45799999999 9999999999999999999999999999985 355677654 899
Q ss_pred eCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCC
Q 001557 615 VDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFS 652 (1054)
Q Consensus 615 v~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fs 652 (1054)
+++.++++|+++|.++|++++.+++.-..-++.+..-+
T Consensus 393 ~~~~~~~~m~~~i~~lL~d~~~~~~~~~~q~~~a~~~~ 430 (438)
T TIGR02919 393 FEHNEVDQLISKLKDLLNDPNQFRELLEQQREHANDIS 430 (438)
T ss_pred ecCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999887766555555543333
No 144
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.98 E-value=2.3e-07 Score=108.67 Aligned_cols=150 Identities=17% Similarity=0.274 Sum_probs=95.9
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE--EEecCCCchhhhhchHHHHHHHHHHHHHcCCCC--------------CEEeC
Q 001557 486 PKKNITTLVKAFGECRPLRELANLTL--IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYG--------------QVAYP 549 (1054)
Q Consensus 486 ~~Kgi~~ll~A~~~l~~~~~~~~l~L--IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~--------------~V~~~ 549 (1054)
..++++.+++++..+.+. +++.+ .+.+..+ ...+.+.+...++.. .+.+.
T Consensus 219 ~~~~lp~~l~al~~L~~~---~~~~~v~~~~~~~~-----------~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~ 284 (396)
T TIGR03492 219 AYRNLKLLLRALEALPDS---QPFVFLAAIVPSLS-----------LEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVL 284 (396)
T ss_pred HHccHHHHHHHHHHHhhC---CCeEEEEEeCCCCC-----------HHHHHHHHHhcCceecCCccccchhhccCceEEE
Confidence 457888999999998532 45544 3323333 233444444444421 23333
Q ss_pred CCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc---cceee----CCceEEeCCCCHHH
Q 001557 550 KHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV---DIHRV----LDNGLLVDPHDQQS 622 (1054)
Q Consensus 550 g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~---eiv~~----~~~Gllv~p~d~~~ 622 (1054)
.+ ..++..+|+.| |++|..| |.+..|++++|+|+|.....+.. .+.+. ...++.+...+++.
T Consensus 285 ~~--~~~~~~~l~~A----DlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~l~~~~~~~ 353 (396)
T TIGR03492 285 LG--RGAFAEILHWA----DLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVFLASKNPEQ 353 (396)
T ss_pred ec--hHhHHHHHHhC----CEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEecCCCCHHH
Confidence 33 35789999999 9999875 56669999999999998744331 11121 12455555678899
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHH
Q 001557 623 IADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSY 660 (1054)
Q Consensus 623 la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~y 660 (1054)
++++|.+++.|++.++++.+++++.. .....+.+++..
T Consensus 354 l~~~l~~ll~d~~~~~~~~~~~~~~lg~~~a~~~ia~~i 392 (396)
T TIGR03492 354 AAQVVRQLLADPELLERCRRNGQERMGPPGASARIAESI 392 (396)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 99999999999988877775555544 344555555443
No 145
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=98.88 E-value=3.5e-07 Score=107.55 Aligned_cols=132 Identities=17% Similarity=0.105 Sum_probs=87.3
Q ss_pred hhcCCCCCcEEEEEeCCCC---CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCC
Q 001557 468 HFFSNPRKPMILALARPDP---KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYG 544 (1054)
Q Consensus 468 ~~~~~~~~~~Il~vgRld~---~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~ 544 (1054)
.+......+++++.|.... .+-...+++|+..+ ...+.+.+|...... ....+
T Consensus 233 ~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~g~~~~~~-------------------~~~~~ 288 (401)
T cd03784 233 LFLAAGRPPVYVGFGSMVVRDPEALARLDVEAVATL-----GQRAILSLGWGGLGA-------------------EDLPD 288 (401)
T ss_pred HHHhCCCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEccCccccc-------------------cCCCC
Confidence 3333345567788888754 34445666666654 123434556543210 23456
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCc----ccceeeCCceEEeCCC--
Q 001557 545 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGP----VDIHRVLDNGLLVDPH-- 618 (1054)
Q Consensus 545 ~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~----~eiv~~~~~Gllv~p~-- 618 (1054)
+|.+.+++++ ..+|..| |++|.- |-..++.||+++|+|+|....++- ...+...+.|+.+++.
T Consensus 289 ~v~~~~~~p~---~~ll~~~----d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~ 357 (401)
T cd03784 289 NVRVVDFVPH---DWLLPRC----AAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPREL 357 (401)
T ss_pred ceEEeCCCCH---HHHhhhh----heeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccC
Confidence 8999898764 4678889 999933 335889999999999999987652 2233445567777655
Q ss_pred CHHHHHHHHHHHHhCH
Q 001557 619 DQQSIADALLKLVSDK 634 (1054)
Q Consensus 619 d~~~la~aI~~ll~d~ 634 (1054)
+.++++++|.++++++
T Consensus 358 ~~~~l~~al~~~l~~~ 373 (401)
T cd03784 358 TAERLAAALRRLLDPP 373 (401)
T ss_pred CHHHHHHHHHHHhCHH
Confidence 6899999999999854
No 146
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=98.82 E-value=4.4e-07 Score=93.55 Aligned_cols=180 Identities=18% Similarity=0.151 Sum_probs=113.7
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCccccccccccccccc
Q 001557 167 YIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 246 (1054)
Q Consensus 167 kIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 246 (1054)
+|++|...|. |+..||.++.+.+|+..|++. | ++|+|.|+....+. .
T Consensus 3 kIaIiGtrGI----------Pa~YGGfET~ve~L~~~l~~~-g-~~v~Vyc~~~~~~~-------~-------------- 49 (185)
T PF09314_consen 3 KIAIIGTRGI----------PARYGGFETFVEELAPRLVSK-G-IDVTVYCRSDYYPY-------K-------------- 49 (185)
T ss_pred eEEEEeCCCC----------CcccCcHHHHHHHHHHHHhcC-C-ceEEEEEccCCCCC-------C--------------
Confidence 6999998776 466799999999999999999 8 89999998632111 0
Q ss_pred ccCCCCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCC-chHHHHHHH
Q 001557 247 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYAD-AGDAAALLS 325 (1054)
Q Consensus 247 ~~~~~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~-a~~~a~~l~ 325 (1054)
..+..|++++.+|..... .+..+.-. +..+..++.- ...+..+.||||.+... .+++..++.
T Consensus 50 -~~~y~gv~l~~i~~~~~g----------~~~si~yd----~~sl~~al~~--~~~~~~~~~ii~ilg~~~g~~~~~~~r 112 (185)
T PF09314_consen 50 -EFEYNGVRLVYIPAPKNG----------SAESIIYD----FLSLLHALRF--IKQDKIKYDIILILGYGIGPFFLPFLR 112 (185)
T ss_pred -CcccCCeEEEEeCCCCCC----------chHHHHHH----HHHHHHHHHH--HhhccccCCEEEEEcCCccHHHHHHHH
Confidence 122359999999865331 11121111 1111112110 00112357899998865 344444443
Q ss_pred c--cCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHH
Q 001557 326 G--ALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVL 403 (1054)
Q Consensus 326 ~--~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l 403 (1054)
. ..|.|++++.|++..... .| +. .....+++ .|+.+.+.||.+|+-|+...+.+...|..
T Consensus 113 ~~~~~g~~v~vN~DGlEWkR~-KW------~~-~~k~~lk~-----~E~~avk~ad~lIaDs~~I~~y~~~~y~~----- 174 (185)
T PF09314_consen 113 KLRKKGGKVVVNMDGLEWKRA-KW------GR-PAKKYLKF-----SEKLAVKYADRLIADSKGIQDYIKERYGR----- 174 (185)
T ss_pred hhhhcCCcEEECCCcchhhhh-hc------CH-HHHHHHHH-----HHHHHHHhCCEEEEcCHHHHHHHHHHcCC-----
Confidence 2 357799999998855331 11 11 01112222 47779999999999999877777666651
Q ss_pred HHHHHHhHhcccccCCCCCCcEEEeCCCCc
Q 001557 404 ERKLRARIKRGVSCHGRFMPRMVVIPPGIE 433 (1054)
Q Consensus 404 ~~~l~~r~~~gv~~~g~~~~rv~vIPnGID 433 (1054)
++..+||.|.|
T Consensus 175 -------------------~~s~~IaYGad 185 (185)
T PF09314_consen 175 -------------------KKSTFIAYGAD 185 (185)
T ss_pred -------------------CCcEEecCCCC
Confidence 27899999976
No 147
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.76 E-value=1.9e-08 Score=101.94 Aligned_cols=74 Identities=15% Similarity=0.058 Sum_probs=59.1
Q ss_pred CHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEecCcchhHHhhhhccCCCcccccccCCCceEEeccc
Q 001557 956 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEA 1035 (1054)
Q Consensus 956 sKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~ 1035 (1054)
+|..++..+++++|++++++++ +||+.| | ++|++.+|.+++|.|+. ..+. +...+++.+
T Consensus 76 ~k~~~~~~~~~~~~~~~~~~~~-vGDs~~-D-~~~~~~ag~~~~v~~~~--~~~~----------------~~a~~i~~~ 134 (154)
T TIGR01670 76 NKLIAFSDILEKLALAPENVAY-IGDDLI-D-WPVMEKVGLSVAVADAH--PLLI----------------PRADYVTRI 134 (154)
T ss_pred chHHHHHHHHHHcCCCHHHEEE-ECCCHH-H-HHHHHHCCCeEecCCcC--HHHH----------------HhCCEEecC
Confidence 4888999999999999999888 999999 9 99999999999999998 2222 223366676
Q ss_pred cCH-HHHHHHHHHhcc
Q 001557 1036 CDS-YDIRASLEKLGV 1050 (1054)
Q Consensus 1036 ~~~-~gI~~al~~~~~ 1050 (1054)
... +|++++++++=.
T Consensus 135 ~~~~g~~~~~~~~~~~ 150 (154)
T TIGR01670 135 AGGRGAVREVCELLLL 150 (154)
T ss_pred CCCCcHHHHHHHHHHH
Confidence 654 449999887643
No 148
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=98.75 E-value=6.5e-06 Score=96.55 Aligned_cols=109 Identities=21% Similarity=0.207 Sum_probs=73.2
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCccc----ceeeCCceEEeCCC
Q 001557 543 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD----IHRVLDNGLLVDPH 618 (1054)
Q Consensus 543 ~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~e----iv~~~~~Gllv~p~ 618 (1054)
.++|.+.+++++ ..++..| |++|..+ |. .++.||+++|+|+|+....+-.. .+...+.|..++..
T Consensus 274 ~~~v~~~~~~p~---~~ll~~~----~~~I~hg---G~-~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~ 342 (392)
T TIGR01426 274 PPNVEVRQWVPQ---LEILKKA----DAFITHG---GM-NSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPPE 342 (392)
T ss_pred CCCeEEeCCCCH---HHHHhhC----CEEEECC---Cc-hHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEeccc
Confidence 467888888875 3778888 9988653 33 47899999999999987654332 23344567777643
Q ss_pred --CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 001557 619 --DQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLS 662 (1054)
Q Consensus 619 --d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~ 662 (1054)
+.++++++|.+++.+++.++++.+-+.+....-.-+..++...+
T Consensus 343 ~~~~~~l~~ai~~~l~~~~~~~~~~~l~~~~~~~~~~~~aa~~i~~ 388 (392)
T TIGR01426 343 EVTAEKLREAVLAVLSDPRYAERLRKMRAEIREAGGARRAADEIEG 388 (392)
T ss_pred cCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 57899999999999987555543333322234455555544443
No 149
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.69 E-value=3.9e-06 Score=97.35 Aligned_cols=263 Identities=18% Similarity=0.162 Sum_probs=150.2
Q ss_pred CcceEEEEcC-CCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEe
Q 001557 305 IWPVAIHGHY-ADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 383 (1054)
Q Consensus 305 ~~pDVIh~h~-~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~ 383 (1054)
.+||+|.++. -...+.+++.+..++||+++.--+.-.. |. .+ ...|++ +-+-|+..++
T Consensus 92 ~~Pd~vlv~GD~~~~la~alaA~~~~IPv~HveaG~rs~--------~~--~e------E~~r~~-----i~~la~l~f~ 150 (365)
T TIGR03568 92 LKPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHGGEVTE--------GA--ID------ESIRHA-----ITKLSHLHFV 150 (365)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHhCCcEEEEECCccCC--------CC--ch------HHHHHH-----HHHHHhhccC
Confidence 6799999987 4677788888899999998544332110 00 00 011221 2345778888
Q ss_pred cCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCC-CCcCCCcccCCCCCCCcccccCCCCCCCCCch
Q 001557 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPP-GIEFHHIVRHNGDVDGEVERDEGSPASPDPPI 462 (1054)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPn-GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1054)
+++...+.+.+. |....++.++.| ++|.-..... . ..
T Consensus 151 ~t~~~~~~L~~e-----------------------g~~~~~i~~tG~~~iD~l~~~~~-----------------~--~~ 188 (365)
T TIGR03568 151 ATEEYRQRVIQM-----------------------GEDPDRVFNVGSPGLDNILSLDL-----------------L--SK 188 (365)
T ss_pred CCHHHHHHHHHc-----------------------CCCCCcEEEECCcHHHHHHhhhc-----------------c--CH
Confidence 888776654321 111226766655 4553222110 0 01
Q ss_pred hHHHhhhcCCCCCcEEEE-EeCC-----CCCCCHHHHHHHHHhcccccCCCcEEEEEecC-CCchhhhhchHHHHHHHHH
Q 001557 463 WSEIMHFFSNPRKPMILA-LARP-----DPKKNITTLVKAFGECRPLRELANLTLIMGNR-DDIDEMSGTNAALLLSILK 535 (1054)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~-vgRl-----d~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~-~~~~~~~~~~~~~~~~i~~ 535 (1054)
......+..++++++++. +-+- ...+.+..+++++..+ . .++.++.-.. +.. ..+...+..
T Consensus 189 ~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~---~--~~~~vi~P~~~p~~-------~~i~~~i~~ 256 (365)
T TIGR03568 189 EELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDEL---N--KNYIFTYPNADAGS-------RIINEAIEE 256 (365)
T ss_pred HHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHh---c--cCCEEEEeCCCCCc-------hHHHHHHHH
Confidence 112233333334455443 3332 2223455666666554 2 1333443222 211 122333433
Q ss_pred HHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEe
Q 001557 536 LIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLV 615 (1054)
Q Consensus 536 l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv 615 (1054)
+... .+++.+.+.++..++..+++.| +++|-- .-|.. .||.+.|+|+|+- |.-+|.+..+.+.++|
T Consensus 257 ~~~~---~~~v~l~~~l~~~~~l~Ll~~a----~~vitd----SSggi-~EA~~lg~Pvv~l--~~R~e~~~~g~nvl~v 322 (365)
T TIGR03568 257 YVNE---HPNFRLFKSLGQERYLSLLKNA----DAVIGN----SSSGI-IEAPSFGVPTINI--GTRQKGRLRADSVIDV 322 (365)
T ss_pred HhcC---CCCEEEECCCChHHHHHHHHhC----CEEEEc----ChhHH-HhhhhcCCCEEee--cCCchhhhhcCeEEEe
Confidence 3211 3679999999999999999999 888833 22333 8999999999954 5677887777888888
Q ss_pred CCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHH
Q 001557 616 DPHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSR 663 (1054)
Q Consensus 616 ~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~ 663 (1054)
+.|+++|.+++.+++ ++..++. +... ..|-....+++..+.
T Consensus 323 -g~~~~~I~~a~~~~~-~~~~~~~-----~~~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 323 -DPDKEEIVKAIEKLL-DPAFKKS-----LKNVKNPYGDGNSSERIIEI 364 (365)
T ss_pred -CCCHHHHHHHHHHHh-ChHHHHH-----HhhCCCCCCCChHHHHHHHh
Confidence 679999999999954 4433222 1222 356555566665553
No 150
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.63 E-value=1e-07 Score=97.53 Aligned_cols=71 Identities=17% Similarity=0.080 Sum_probs=55.3
Q ss_pred CHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEecCcchhHHhhhhccCCCcccccccCCCceEEeccc
Q 001557 956 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEA 1035 (1054)
Q Consensus 956 sKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~ 1035 (1054)
.|...++.+++++|++++++++ +||+.| | ++|++.+|.++||+||. ..++..++ +++..
T Consensus 82 pkp~~~~~~~~~l~~~~~ev~~-iGD~~n-D-i~~~~~ag~~~am~nA~--~~lk~~A~----------------~I~~~ 140 (169)
T TIGR02726 82 KKTEPYAQMLEEMNISDAEVCY-VGDDLV-D-LSMMKRVGLAVAVGDAV--ADVKEAAA----------------YVTTA 140 (169)
T ss_pred CCHHHHHHHHHHcCcCHHHEEE-ECCCHH-H-HHHHHHCCCeEECcCch--HHHHHhCC----------------EEcCC
Confidence 4567899999999999999988 888888 9 99999999999999998 44444444 67666
Q ss_pred cCHHHH-HHHHHH
Q 001557 1036 CDSYDI-RASLEK 1047 (1054)
Q Consensus 1036 ~~~~gI-~~al~~ 1047 (1054)
...+|+ .+.+++
T Consensus 141 ~~~~g~v~e~~e~ 153 (169)
T TIGR02726 141 RGGHGAVREVAEL 153 (169)
T ss_pred CCCCCHHHHHHHH
Confidence 666654 444433
No 151
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.63 E-value=1.5e-08 Score=114.36 Aligned_cols=71 Identities=13% Similarity=0.156 Sum_probs=59.8
Q ss_pred CCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEecCcchhHHhhhhccCCCcccccccCCCceEEec
Q 001557 954 LASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVD 1033 (1054)
Q Consensus 954 ~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t 1033 (1054)
+..|+.+++.+++++|++++++++ +||+.| | ++|++.+|.|||| ||. +.++..++ +++
T Consensus 246 ~k~K~~~L~~la~~lgi~~~qtIa-VGDg~N-D-l~m~~~AGlgiA~-nAk--p~Vk~~Ad----------------~~i 303 (322)
T PRK11133 246 AQYKADTLTRLAQEYEIPLAQTVA-IGDGAN-D-LPMIKAAGLGIAY-HAK--PKVNEQAQ----------------VTI 303 (322)
T ss_pred cccHHHHHHHHHHHcCCChhhEEE-EECCHH-H-HHHHHHCCCeEEe-CCC--HHHHhhCC----------------EEe
Confidence 458999999999999999999999 888888 8 9999999999999 998 44444444 666
Q ss_pred cccCHHHHHHHHH
Q 001557 1034 EACDSYDIRASLE 1046 (1054)
Q Consensus 1034 ~~~~~~gI~~al~ 1046 (1054)
...+-+||..-|.
T Consensus 304 ~~~~l~~~l~~~~ 316 (322)
T PRK11133 304 RHADLMGVLCILS 316 (322)
T ss_pred cCcCHHHHHHHhc
Confidence 7778888887663
No 152
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.55 E-value=7.5e-05 Score=84.94 Aligned_cols=264 Identities=16% Similarity=0.205 Sum_probs=159.5
Q ss_pred CcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEec
Q 001557 305 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 384 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~ 384 (1054)
.+||++...-...-.....-++..|+|+++----+ +.... ..|....+ ..+..++..|.|++.
T Consensus 122 ~~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaRL--------------S~rS~-~~y~k~~~--~~~~~~~~i~li~aQ 184 (419)
T COG1519 122 WRPKLLIIMETELWPNLINELKRRGIPLVLVNARL--------------SDRSF-ARYAKLKF--LARLLFKNIDLILAQ 184 (419)
T ss_pred cCCCEEEEEeccccHHHHHHHHHcCCCEEEEeeee--------------chhhh-HHHHHHHH--HHHHHHHhcceeeec
Confidence 55897775532111122223456799987632211 21111 11222222 245568999999999
Q ss_pred CHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhH
Q 001557 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS 464 (1054)
Q Consensus 385 S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1054)
|+...+.+..+ |. +++.+.-| ........ ...+...+
T Consensus 185 se~D~~Rf~~L------------------Ga-------~~v~v~GN---lKfd~~~~---------------~~~~~~~~ 221 (419)
T COG1519 185 SEEDAQRFRSL------------------GA-------KPVVVTGN---LKFDIEPP---------------PQLAAELA 221 (419)
T ss_pred CHHHHHHHHhc------------------CC-------cceEEecc---eeecCCCC---------------hhhHHHHH
Confidence 99877765432 11 13455444 22211111 01122223
Q ss_pred HHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCC
Q 001557 465 EIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYG 544 (1054)
Q Consensus 465 ~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~ 544 (1054)
..+.... ++++++++.+.- ..--+.+++++..+++ ..+++.+|+-.+. .+-...+.+++.+.++.-
T Consensus 222 ~~r~~l~-~~r~v~iaaSTH--~GEeei~l~~~~~l~~--~~~~~llIlVPRH---------pERf~~v~~l~~~~gl~~ 287 (419)
T COG1519 222 ALRRQLG-GHRPVWVAASTH--EGEEEIILDAHQALKK--QFPNLLLILVPRH---------PERFKAVENLLKRKGLSV 287 (419)
T ss_pred HHHHhcC-CCCceEEEecCC--CchHHHHHHHHHHHHh--hCCCceEEEecCC---------hhhHHHHHHHHHHcCCeE
Confidence 3344443 338999998882 2334568899999864 4567777666654 233667888888887631
Q ss_pred CEEeCCC-CC-----------CCcHHHHHHHhhcCCcEEEec-CCCCCCcHHHHHHHHcCCCEEEccc-cCcccc---ee
Q 001557 545 QVAYPKH-HK-----------QSDVPDIYRLAAKTKGVFINP-AFIEPFGLTLIEAAAYGLPIVATKN-GGPVDI---HR 607 (1054)
Q Consensus 545 ~V~~~g~-~~-----------~~dl~~ly~~Aa~~~dv~v~p-s~~Egfgl~l~EAmA~G~PVIat~~-Gg~~ei---v~ 607 (1054)
..+-.. .+ .-|+..+|..| |+.++- |+.+--|--++|++++|+|||.-.. --..|+ +.
T Consensus 288 -~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~a----diAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~ 362 (419)
T COG1519 288 -TRRSQGDPPFSDTDVLLGDTMGELGLLYGIA----DIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLL 362 (419)
T ss_pred -EeecCCCCCCCCCcEEEEecHhHHHHHHhhc----cEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHH
Confidence 111111 01 23789999999 887665 6665557889999999999999663 223333 23
Q ss_pred eCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHh
Q 001557 608 VLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIH 649 (1054)
Q Consensus 608 ~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~ 649 (1054)
..+.|+.|+ |.+.++.++..++++++.++++++++...+.
T Consensus 363 ~~ga~~~v~--~~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~ 402 (419)
T COG1519 363 QAGAGLQVE--DADLLAKAVELLLADEDKREAYGRAGLEFLA 402 (419)
T ss_pred hcCCeEEEC--CHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 334578887 6889999999999999999999999999884
No 153
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=98.54 E-value=9.6e-06 Score=92.52 Aligned_cols=112 Identities=14% Similarity=0.222 Sum_probs=74.0
Q ss_pred CCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcC
Q 001557 488 KNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKT 567 (1054)
Q Consensus 488 Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~ 567 (1054)
.+...+++++..+ +++.+++|+.+.. .+ .+.+++.+.++.+ +++.++|..|
T Consensus 198 ~~~~~l~~~l~~~------~~~~~i~~~~~~~-----------------~~--~~~~~v~~~~~~~-~~~~~~l~~a--- 248 (321)
T TIGR00661 198 EYRYKILELLGKI------ANVKFVCYSYEVA-----------------KN--SYNENVEIRRITT-DNFKELIKNA--- 248 (321)
T ss_pred CCHHHHHHHHHhC------CCeEEEEeCCCCC-----------------cc--ccCCCEEEEECCh-HHHHHHHHhC---
Confidence 3556777877665 3455666643210 01 1235788877755 6899999999
Q ss_pred CcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCccc------ceeeCCceEEeCCCCHHHHHHHHHHHHhCH
Q 001557 568 KGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD------IHRVLDNGLLVDPHDQQSIADALLKLVSDK 634 (1054)
Q Consensus 568 ~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~e------iv~~~~~Gllv~p~d~~~la~aI~~ll~d~ 634 (1054)
|++|.-+ | ..++.||+++|+|+|.....+..| .+...+.|+.++..+. ++.+++...++++
T Consensus 249 -d~vI~~~---G-~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~~-~~~~~~~~~~~~~ 315 (321)
T TIGR00661 249 -ELVITHG---G-FSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKEL-RLLEAILDIRNMK 315 (321)
T ss_pred -CEEEECC---C-hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhhH-HHHHHHHhccccc
Confidence 9999765 2 247999999999999988765434 2344466888877666 5555555555443
No 154
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.51 E-value=2.2e-06 Score=84.84 Aligned_cols=128 Identities=22% Similarity=0.327 Sum_probs=80.9
Q ss_pred hHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCcccccccC
Q 001557 194 VKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELL 273 (1054)
Q Consensus 194 ~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~k~~l 273 (1054)
..++.++++.|.+. | ++|+++|.... + .. .....++.+++++.+.+ . .
T Consensus 10 ~~~~~~~~~~L~~~-g-~~V~ii~~~~~-------~-~~---------------~~~~~~i~~~~~~~~~k------~-~ 57 (139)
T PF13477_consen 10 STFIYNLAKELKKR-G-YDVHIITPRND-------Y-EK---------------YEIIEGIKVIRLPSPRK------S-P 57 (139)
T ss_pred HHHHHHHHHHHHHC-C-CEEEEEEcCCC-------c-hh---------------hhHhCCeEEEEecCCCC------c-c
Confidence 45788999999999 8 99999997421 1 00 11235889998865422 0 1
Q ss_pred CCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCc-hHHHHHHHccCC-CCEEEEeCCCccchHHHHHHhC
Q 001557 274 WPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADA-GDAAALLSGALN-VPMVFTGHSLGRDKLEQLLKQG 351 (1054)
Q Consensus 274 ~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a-~~~a~~l~~~~~-iP~V~t~H~l~~~~~~~l~~~g 351 (1054)
++++ . ...+.+.+.+ .+|||||+|...+ ++++.++++..+ +|+|++.|+...... +
T Consensus 58 ~~~~--------~-~~~l~k~ik~-------~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~~------~ 115 (139)
T PF13477_consen 58 LNYI--------K-YFRLRKIIKK-------EKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYNS------S 115 (139)
T ss_pred HHHH--------H-HHHHHHHhcc-------CCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeecC------C
Confidence 2221 1 1123333333 5699999999754 788888878888 999999998643110 0
Q ss_pred CCChhhhhhHhHHHHHHHHHHhhhccCCEEEecC
Q 001557 352 RLSRDEINTTYKIMRRIEAEELSLDASEIVITST 385 (1054)
Q Consensus 352 ~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S 385 (1054)
. ..++.+. .++.+++.+|.|++.|
T Consensus 116 ~--------~~~~~~~--~~~~~~k~~~~ii~~~ 139 (139)
T PF13477_consen 116 K--------KKKLKKF--IIKFAFKRADKIIVQS 139 (139)
T ss_pred c--------hHHHHHH--HHHHHHHhCCEEEEcC
Confidence 0 0011222 2556899999999865
No 155
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.49 E-value=9.3e-08 Score=99.77 Aligned_cols=45 Identities=18% Similarity=0.079 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEecCcc
Q 001557 957 RSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVG 1004 (1054)
Q Consensus 957 Kg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMgNa~ 1004 (1054)
|..+++.+++++|++++++++ +||+.+ | ++|++.+|.+++|+++.
T Consensus 97 k~~~l~~~~~~~gl~~~ev~~-VGDs~~-D-~~~a~~aG~~~~v~~~~ 141 (183)
T PRK09484 97 KLIAFSDLLEKLAIAPEQVAY-IGDDLI-D-WPVMEKVGLSVAVADAH 141 (183)
T ss_pred HHHHHHHHHHHhCCCHHHEEE-ECCCHH-H-HHHHHHCCCeEecCChh
Confidence 568899999999999999988 888888 9 99999999999998665
No 156
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.47 E-value=1.1e-05 Score=91.58 Aligned_cols=118 Identities=19% Similarity=0.305 Sum_probs=78.8
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCC
Q 001557 473 PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHH 552 (1054)
Q Consensus 473 ~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~ 552 (1054)
+...+++++|..+.. .+++++..+. ...+. ++|.... +. -.++|.+.++.
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~~----~~~~~-v~g~~~~-~~--------------------~~~ni~~~~~~ 240 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKALP----DYQFI-VFGPNAA-DP--------------------RPGNIHVRPFS 240 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhCC----CCeEE-EEcCCcc-cc--------------------cCCCEEEeecC
Confidence 345688999988776 6677777762 33443 4465421 00 04678877763
Q ss_pred CCCcHHHHHHHhhcCCcEEEecCCCCCCcH-HHHHHHHcCCCEEEccccCcccc------eeeCCceEEeCCC--CHHHH
Q 001557 553 KQSDVPDIYRLAAKTKGVFINPAFIEPFGL-TLIEAAAYGLPIVATKNGGPVDI------HRVLDNGLLVDPH--DQQSI 623 (1054)
Q Consensus 553 ~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl-~l~EAmA~G~PVIat~~Gg~~ei------v~~~~~Gllv~p~--d~~~l 623 (1054)
..++.+++..| |++|.-+ |. ++.|++++|+|+|.-...+..|- ++..+.|..+++. +++.+
T Consensus 241 -~~~~~~~m~~a----d~vIs~~-----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l 310 (318)
T PF13528_consen 241 -TPDFAELMAAA----DLVISKG-----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERL 310 (318)
T ss_pred -hHHHHHHHHhC----CEEEECC-----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHH
Confidence 36899999999 9998653 54 49999999999999887554442 2233456666533 57888
Q ss_pred HHHHHHH
Q 001557 624 ADALLKL 630 (1054)
Q Consensus 624 a~aI~~l 630 (1054)
+++|.++
T Consensus 311 ~~~l~~~ 317 (318)
T PF13528_consen 311 AEFLERL 317 (318)
T ss_pred HHHHhcC
Confidence 8888653
No 157
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=98.43 E-value=1.9e-06 Score=95.97 Aligned_cols=318 Identities=18% Similarity=0.228 Sum_probs=176.8
Q ss_pred eEEEEcCCCchHHHHHH-HccCCCCEEEEeCCCccchHHHHHHhCCC---------ChhhhhhHhHHHHHHHHHHhhhcc
Q 001557 308 VAIHGHYADAGDAAALL-SGALNVPMVFTGHSLGRDKLEQLLKQGRL---------SRDEINTTYKIMRRIEAEELSLDA 377 (1054)
Q Consensus 308 DVIh~h~~~a~~~a~~l-~~~~~iP~V~t~H~l~~~~~~~l~~~g~~---------~~~~i~~~~~~~~ri~~E~~~l~~ 377 (1054)
-|.|.|.|.+|....+. ++++.|-+|||.|..-. .+++..|.. .-+.-.....+..|...|+.+...
T Consensus 176 vVahFHEW~AGVgL~l~R~rrl~iaTifTTHATLL---GRyLCA~~~DfYNnLd~f~vD~EAGkr~IYHrYC~ERaa~h~ 252 (692)
T KOG3742|consen 176 VVAHFHEWQAGVGLILCRARRLDIATIFTTHATLL---GRYLCAGNVDFYNNLDSFDVDKEAGKRQIYHRYCLERAAAHT 252 (692)
T ss_pred HHHHHHHHHhccchheehhcccceEEEeehhHHHH---HHHHhcccchhhhchhhcccchhhccchhHHHHHHHHHhhhh
Confidence 45677778766533322 34456667999996421 112222211 111112234567788888888999
Q ss_pred CCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCC
Q 001557 378 SEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPAS 457 (1054)
Q Consensus 378 ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~ 457 (1054)
|+...++|+-.+-+-..+... ..=.+.|||.+...|.. +.++++..+.
T Consensus 253 AhVFTTVSeITa~EAeHlLkR------------------------KPD~itPNGLNV~KFsA--------~HEFQNLHA~ 300 (692)
T KOG3742|consen 253 AHVFTTVSEITALEAEHLLKR------------------------KPDVITPNGLNVKKFSA--------VHEFQNLHAQ 300 (692)
T ss_pred hhhhhhHHHHHHHHHHHHHhc------------------------CCCeeCCCCcceeehhH--------HHHHHHHHHH
Confidence 998888887444332222111 03467899999999873 2233333333
Q ss_pred CCCchhHHHhhhcC-----C-CCCcEEEEEeCCCC-CCCHHHHHHHHHhcccc---cCCCc-EE-E-EEec---CCCchh
Q 001557 458 PDPPIWSEIMHFFS-----N-PRKPMILALARPDP-KKNITTLVKAFGECRPL---RELAN-LT-L-IMGN---RDDIDE 521 (1054)
Q Consensus 458 ~~~~~~~~~~~~~~-----~-~~~~~Il~vgRld~-~Kgi~~ll~A~~~l~~~---~~~~~-l~-L-IiG~---~~~~~~ 521 (1054)
....+.+.++..|. + ....+++..||... .||-+.+|+++.++.-+ ...+. ++ + |+-. .-..+.
T Consensus 301 ~KekIndFVRGHF~GhlDFdLdkTlyfFiAGRYEf~NKGaDmFiEsLaRLN~~Lk~~~s~~TVVaFlImPaktN~FnVes 380 (692)
T KOG3742|consen 301 KKEKINDFVRGHFHGHLDFDLDKTLYFFIAGRYEFSNKGADMFIESLARLNYLLKVSGSPKTVVAFLIMPAKTNSFNVES 380 (692)
T ss_pred HHHHHHHHhhhhccccccccccceEEEEEeeeeeeccCchHHHHHHHHHhHHHHeecCCCceEEEEEEeecCCCccchhh
Confidence 44555555555432 1 23345666788884 79999999999988421 22222 22 2 4421 111222
Q ss_pred hhhch---------HHHHHHH--------------------------------------------------------HHH
Q 001557 522 MSGTN---------AALLLSI--------------------------------------------------------LKL 536 (1054)
Q Consensus 522 ~~~~~---------~~~~~~i--------------------------------------------------------~~l 536 (1054)
++.+. .++.+.+ +..
T Consensus 381 LkgqAv~kqL~dtv~~Vk~~~Gkrifd~~l~g~lPd~~ell~~~d~v~lKr~i~a~~r~slPPv~THNm~dDa~DpiL~~ 460 (692)
T KOG3742|consen 381 LKGQAVRKQLWDTVNEVKEKVGKRIFDHCLRGELPDLDELLDKDDLVLLKRCIFALQRQSLPPVCTHNMIDDANDPILSS 460 (692)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCChHHhhChhHHHHHHHHHHHhccCCCCCceeccccccccchHHHH
Confidence 22111 0111110 000
Q ss_pred HHHcCC----CCC--EEeCC-CC------CCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc
Q 001557 537 IDKYDL----YGQ--VAYPK-HH------KQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV 603 (1054)
Q Consensus 537 ~~~~~l----~~~--V~~~g-~~------~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~ 603 (1054)
+.+.++ .++ |.|++ ++ =.-|..++.+.| ++.|+||.+||+|.+..|.-.+|+|-|+|+..|.-
T Consensus 461 iRr~~LFN~~~DRVKvifHPEFLss~sPllglDYeeFVRGC----HLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFG 536 (692)
T KOG3742|consen 461 IRRIGLFNSPSDRVKVIFHPEFLSSTSPLLGLDYEEFVRGC----HLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFG 536 (692)
T ss_pred hHhhhcccCcccceEEEecHHHhccCCCCcCCCHHHHhccc----cccccccccCCCCCCchheEEeccccccccccchh
Confidence 111111 011 11211 11 112677888999 99999999999999999999999999999987654
Q ss_pred c----ceeeC-CceEEe-C------CCCHHHHHHHHHHHHhCHHHHHHHHHHHH-HHH-hcCCHHHHHHHHHHHHH
Q 001557 604 D----IHRVL-DNGLLV-D------PHDQQSIADALLKLVSDKQLWERCRQNGL-KNI-HQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 604 e----iv~~~-~~Gllv-~------p~d~~~la~aI~~ll~d~~~~~~~~~~~~-~~v-~~fsw~~~a~~yl~~l~ 665 (1054)
- .|++. ..|+.+ + ..+.+++++-+...... ..+|++-++.+ +.+ ...+|......|.+.=.
T Consensus 537 cfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m~~F~~q-sRRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~ 611 (692)
T KOG3742|consen 537 CFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFMYEFCKQ-SRRQRIIQRNRTERLSDLLDWKYLGRYYRKARH 611 (692)
T ss_pred hhHHHHhcCchhceEEEEecccCChhhHHHHHHHHHHHHHHH-HHHHHHHHhcchhhHHHHHhHHHHhHHHHHHHH
Confidence 3 33322 246654 2 23456677777666542 33454444444 334 47899988888876543
No 158
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.33 E-value=8.3e-07 Score=90.05 Aligned_cols=67 Identities=12% Similarity=0.018 Sum_probs=56.2
Q ss_pred EEEEEecCCC---C-----------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHH---HHHHh-----CCCCC
Q 001557 771 VFVIAADCDT---T-----------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELH---SLLVS-----GGLSP 828 (1054)
Q Consensus 771 Liv~DiDGTL---~-----------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~---~~l~~-----l~l~~ 828 (1054)
+|++|||||| + ..+++.+.+++++++++ |+.|+++|||+...+. +++.. .+++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~----G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp- 75 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNN----GYKILYLTARPIGQADRTRSYLSQIKQDGHNLP- 75 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHc----CCeEEEEcCCcHHHHHHHHHHHHHhhhccccCC-
Confidence 5899999999 2 46799999999999997 8999999999999884 78887 3352
Q ss_pred CCCcEEEEcCCcEEEc
Q 001557 829 LAFDAFICNSGSELYY 844 (1054)
Q Consensus 829 ~~~d~lI~~nGa~I~~ 844 (1054)
+..+||+||+.++.
T Consensus 76 --~g~li~~~g~~~~~ 89 (157)
T smart00775 76 --HGPVLLSPDRLFAA 89 (157)
T ss_pred --CceEEEcCCcchhh
Confidence 25899999998863
No 159
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.29 E-value=0.0001 Score=82.39 Aligned_cols=98 Identities=20% Similarity=0.306 Sum_probs=73.9
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCC
Q 001557 475 KPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQ 554 (1054)
Q Consensus 475 ~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~ 554 (1054)
+.+++++|..++.+....+++++..+ ....++.+|+|..... ..++.+.+... +++.+.+++
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~i~vv~G~~~~~----------~~~l~~~~~~~---~~i~~~~~~-- 232 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAES---QINISITLVTGSSNPN----------LDELKKFAKEY---PNIILFIDV-- 232 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhcc---ccCceEEEEECCCCcC----------HHHHHHHHHhC---CCEEEEeCH--
Confidence 45789999999977667888888765 2345677788876421 23455555543 468887774
Q ss_pred CcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccc
Q 001557 555 SDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN 599 (1054)
Q Consensus 555 ~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~ 599 (1054)
++++++|+.| |++|.+ .|.|+.|++++|+|+|+-..
T Consensus 233 ~~m~~lm~~a----Dl~Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 233 ENMAELMNEA----DLAIGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred HHHHHHHHHC----CEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence 6899999999 999974 47999999999999998765
No 160
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=98.17 E-value=7e-06 Score=90.06 Aligned_cols=70 Identities=16% Similarity=0.149 Sum_probs=59.2
Q ss_pred EEEEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEEcC---CCHHHHHHHHHhCCCCCCCCcEEEEcCCcEEEc
Q 001557 770 YVFVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTA---LTILELHSLLVSGGLSPLAFDAFICNSGSELYY 844 (1054)
Q Consensus 770 kLiv~DiDGTL--~~~i~~~~~~al~~l~~~~~~~gi~fvIaTG---R~~~~i~~~l~~l~l~~~~~d~lI~~nGa~I~~ 844 (1054)
|+|+||+|||| .....+.+.++|++++++ |+.|+++|| |+...+...++.+|++. .+|-+|+++|+.+.|
T Consensus 2 ~~~~~D~DGtl~~~~~~i~~a~~~l~~l~~~----g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~-~~~~iit~~~~~~~~ 76 (249)
T TIGR01457 2 KGYLIDLDGTMYKGKERIPEAETFVHELQKR----DIPYLFVTNNSTRTPESVAEMLASFDIPA-TLETVFTASMATADY 76 (249)
T ss_pred CEEEEeCCCceEcCCeeCcCHHHHHHHHHHC----CCeEEEEeCCCCCCHHHHHHHHHHcCCCC-ChhhEeeHHHHHHHH
Confidence 68999999999 333445789999999997 899999995 99999999999999974 567899999987644
No 161
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.12 E-value=4.1e-06 Score=81.52 Aligned_cols=52 Identities=19% Similarity=0.210 Sum_probs=46.3
Q ss_pred EEEEEecCCC--Ch---------hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 771 VFVIAADCDT--TS---------DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 771 Liv~DiDGTL--~~---------~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
+++||+|||| .. .+.+.+.+.|+.++++ |+.++|+|||....+..+++.+++
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----g~~i~ivS~~~~~~~~~~~~~~~~ 63 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEK----GIKLALATNKSRREVLELLEELGL 63 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHC----CCeEEEEeCchHHHHHHHHHHcCC
Confidence 4899999999 22 6778899999999986 899999999999999999999887
No 162
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.10 E-value=0.00043 Score=77.65 Aligned_cols=124 Identities=14% Similarity=0.148 Sum_probs=102.7
Q ss_pred CCCCCEEeCCCCCC-CcHHHHHHHhhcCCcEEEecCC---CCC---CcHHHHHHHHcCCCEEEccccCcccceeeCCceE
Q 001557 541 DLYGQVAYPKHHKQ-SDVPDIYRLAAKTKGVFINPAF---IEP---FGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGL 613 (1054)
Q Consensus 541 ~l~~~V~~~g~~~~-~dl~~ly~~Aa~~~dv~v~ps~---~Eg---fgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gl 613 (1054)
.+.+++.+.|+.+. ..++..++-- +++++-+. .++ ++.-+.|+++||.|.|+...-+..-.+..+..-+
T Consensus 234 ~~~~~~~yIg~~~~~~~v~~~~~~~----~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~i 309 (373)
T COG4641 234 TWEPNVQYIGYYNPKDGVPNAFKRD----DVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDII 309 (373)
T ss_pred cccchhhhhhccCccchhhhccccc----ceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheE
Confidence 35567778888777 7788888888 88887654 222 3778999999999999999888888877765544
Q ss_pred EeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHhhhc
Q 001557 614 LVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISSCKQR 670 (1054)
Q Consensus 614 lv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~~~~~~ 670 (1054)
+. .|..++.+.+..++..+++++++.+.+++.+ ..|+.++-+..++..+..+..+
T Consensus 310 v~--~d~kdl~~~~~yll~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~sI~~r 365 (373)
T COG4641 310 VY--QDSKDLKEKLKYLLNHPDERKEIAECAYERVLARHTYEERIFKLLNEIASINIR 365 (373)
T ss_pred Ee--cCHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHh
Confidence 44 5999999999999999999999999999999 5899999999999999886654
No 163
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=98.07 E-value=3.3e-05 Score=77.97 Aligned_cols=195 Identities=14% Similarity=0.130 Sum_probs=110.6
Q ss_pred CCCEEEEEEecCCCC---hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCC-CCCcEEEEcCCcEE
Q 001557 767 RRKYVFVIAADCDTT---SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSP-LAFDAFICNSGSEL 842 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL~---~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~-~~~d~lI~~nGa~I 842 (1054)
.++-|+.||+||||+ ..++++..+.|+.+++ .+.+.++-|-.++-+.+-+ |-+. ..|||.-++||-.-
T Consensus 9 ~~~~l~lfdvdgtLt~~r~~~~~e~~~~l~~lr~-----~v~ig~VggsDl~k~~eql---G~~Vl~~fDY~F~ENGl~~ 80 (252)
T KOG3189|consen 9 DEETLCLFDVDGTLTPPRQKVTPEMLEFLQKLRK-----KVTIGFVGGSDLSKQQEQL---GDNVLEEFDYVFSENGLVA 80 (252)
T ss_pred CCceEEEEecCCccccccccCCHHHHHHHHHHhh-----heEEEEeecHHHHHHHHHh---chhHHhhhcccccCCCeeE
Confidence 455799999999995 6789999999999886 4777788887766555544 4221 56899999999988
Q ss_pred EcCCCCCCCCCCCccccCccchhhhccccChhhHHHHHH----HhhhhccCCCCccCcccccccccCcceEEEEEecCC-
Q 001557 843 YYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLV----RWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNP- 917 (1054)
Q Consensus 843 ~~~~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~~~~- 917 (1054)
|..+ +.+.......|+. .+.+++++. -+.......+- ...+ +-.... ..+|=.-++.
T Consensus 81 yk~g---------k~~~~Qsi~~~LG----ee~~q~liNF~LrYlsdidlPiKR--GtFi-EFRNgM--iNvsPIGR~cs 142 (252)
T KOG3189|consen 81 YKGG---------KLLSKQSIINHLG----EEKLQELINFCLRYLSDIDLPIKR--GTFI-EFRNGM--INVSPIGRNCS 142 (252)
T ss_pred eeCC---------cchhHHHHHHHHh----HHHHHHHHHHHHHHHHhcCCcccc--cceE-EecCCc--eeccccccccC
Confidence 8765 2332222222332 223333322 11111111110 0111 100000 0000000000
Q ss_pred ----------CCCc-cHHHHHHHHHHhcCeEEEEEeeCCe-EEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCc----
Q 001557 918 ----------QMIP-PVKELRKLMRIQALRCHVIYCQNGT-KLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGE---- 981 (1054)
Q Consensus 918 ----------~~~~-~~~el~~~l~~~~~~~~v~~s~~~~-~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD---- 981 (1054)
+... .-+.+-+.|+.......+++|-++. .+||.|.|-.|-.-|++|-.. |.+ ++-|+||
T Consensus 143 ~EER~eF~e~Dkk~~iR~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d-gf~---~IhFFGDkT~~ 218 (252)
T KOG3189|consen 143 QEERNEFEELDKKHKIREKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD-GFD---TIHFFGDKTMP 218 (252)
T ss_pred HHHHHHHHHhhhhhhhHHHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc-CCc---eEEEeccccCC
Confidence 0000 1112233344444456667776643 699999999999999998776 776 7788988
Q ss_pred CCCccccccccC
Q 001557 982 CGDTDYEGLLGG 993 (1054)
Q Consensus 982 ~~d~D~~eML~~ 993 (1054)
++| | .+.|.-
T Consensus 219 GGN-D-yEIf~d 228 (252)
T KOG3189|consen 219 GGN-D-YEIFAD 228 (252)
T ss_pred CCC-c-ceeeeC
Confidence 468 8 677753
No 164
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.07 E-value=0.0014 Score=74.45 Aligned_cols=66 Identities=26% Similarity=0.262 Sum_probs=50.2
Q ss_pred cHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccC---cccceeeCCceEEeCCCCHHHHHHHHHHHHh
Q 001557 556 DVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG---PVDIHRVLDNGLLVDPHDQQSIADALLKLVS 632 (1054)
Q Consensus 556 dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg---~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~ 632 (1054)
+...++..| |++| -+-|....||+..|+|.|++..|- .-+.+. ..|+++.-.|++++.+.+.+.+.
T Consensus 241 d~~~Ll~~a----~l~I-----g~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~--~~Gll~~~~~~~ei~~~v~~~~~ 309 (335)
T PF04007_consen 241 DGLDLLYYA----DLVI-----GGGGTMAREAALLGTPAISCFPGKLLAVDKYLI--EKGLLYHSTDPDEIVEYVRKNLG 309 (335)
T ss_pred CHHHHHHhc----CEEE-----eCCcHHHHHHHHhCCCEEEecCCcchhHHHHHH--HCCCeEecCCHHHHHHHHHHhhh
Confidence 566889999 8988 344777899999999999987653 223332 45889998999999987766554
No 165
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.00 E-value=2.6e-06 Score=83.09 Aligned_cols=62 Identities=15% Similarity=0.089 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEecCcchhHHhhhhccCCCcccccccCCCceEEeccc
Q 001557 956 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEA 1035 (1054)
Q Consensus 956 sKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~ 1035 (1054)
+|-.|...|+++++++++++.. +||+-+ | +++|+.+|.++|+.+|. |...+.+.|||..
T Consensus 83 dK~~a~~~L~~~~~l~~e~~ay-iGDD~~-D-lpvm~~vGls~a~~dAh------------------~~v~~~a~~Vt~~ 141 (170)
T COG1778 83 DKLAAFEELLKKLNLDPEEVAY-VGDDLV-D-LPVMEKVGLSVAVADAH------------------PLLKQRADYVTSK 141 (170)
T ss_pred hHHHHHHHHHHHhCCCHHHhhh-hcCccc-c-HHHHHHcCCcccccccC------------------HHHHHhhHhhhhc
Confidence 3777888899999999999977 777777 7 99999999999999999 5555666677655
Q ss_pred cCH
Q 001557 1036 CDS 1038 (1054)
Q Consensus 1036 ~~~ 1038 (1054)
-.-
T Consensus 142 ~GG 144 (170)
T COG1778 142 KGG 144 (170)
T ss_pred cCc
Confidence 443
No 166
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=97.99 E-value=0.0024 Score=77.30 Aligned_cols=164 Identities=12% Similarity=0.109 Sum_probs=99.5
Q ss_pred HHhhhcCCCC-CcEEEEEeCCCC-----CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHH
Q 001557 465 EIMHFFSNPR-KPMILALARPDP-----KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLID 538 (1054)
Q Consensus 465 ~~~~~~~~~~-~~~Il~vgRld~-----~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~ 538 (1054)
++..+..... ..++++.|.... .+-+..+++|++.+. .++.+-.++ +.. .
T Consensus 286 ~l~~fl~~~~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~-----~~viw~~~~-~~~------------------~ 341 (507)
T PHA03392 286 YLEEFLNNSTNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP-----YNVLWKYDG-EVE------------------A 341 (507)
T ss_pred HHHHHHhcCCCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCC-----CeEEEEECC-CcC------------------c
Confidence 3444443333 367788888643 234567778887762 133222232 110 0
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHH--HhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCc----ccceeeCCce
Q 001557 539 KYDLYGQVAYPKHHKQSDVPDIYR--LAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGP----VDIHRVLDNG 612 (1054)
Q Consensus 539 ~~~l~~~V~~~g~~~~~dl~~ly~--~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~----~eiv~~~~~G 612 (1054)
.++.++|.+.+++|+. ++++ .+ ++||. -|-..++.||+.+|+|+|+-...+= ...+...+.|
T Consensus 342 -~~~p~Nv~i~~w~Pq~---~lL~hp~v----~~fIt----HGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G 409 (507)
T PHA03392 342 -INLPANVLTQKWFPQR---AVLKHKNV----KAFVT----QGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIG 409 (507)
T ss_pred -ccCCCceEEecCCCHH---HHhcCCCC----CEEEe----cCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcE
Confidence 1345789999999875 4553 35 77773 2446789999999999999886431 1223344568
Q ss_pred EEeCCC--CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHH
Q 001557 613 LLVDPH--DQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRI 664 (1054)
Q Consensus 613 llv~p~--d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l 664 (1054)
+.++.. +.+++.+||.+++++|.-++.+.+-+.... +..+-.+-|-.+.+.+
T Consensus 410 ~~l~~~~~t~~~l~~ai~~vl~~~~y~~~a~~ls~~~~~~p~~~~~~av~~iE~v 464 (507)
T PHA03392 410 RALDTVTVSAAQLVLAIVDVIENPKYRKNLKELRHLIRHQPMTPLHKAIWYTEHV 464 (507)
T ss_pred EEeccCCcCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 887653 678999999999999876555544444433 3344444444444443
No 167
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=97.94 E-value=0.00015 Score=83.48 Aligned_cols=272 Identities=17% Similarity=0.190 Sum_probs=138.6
Q ss_pred CcceEEEEcCC-CchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEe
Q 001557 305 IWPVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 383 (1054)
Q Consensus 305 ~~pDVIh~h~~-~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~ 383 (1054)
.+||+|..+.- ...+++++.+..++||+++---++-. +......... ..|.. +-+-|+..++
T Consensus 66 ~~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaGlRs---------~d~~~g~~de---~~R~~-----i~~la~lhf~ 128 (346)
T PF02350_consen 66 EKPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAGLRS---------GDRTEGMPDE---INRHA-----IDKLAHLHFA 128 (346)
T ss_dssp HT-SEEEEETTSHHHHHHHHHHHHTT-EEEEES--------------S-TTSSTTHH---HHHHH-----HHHH-SEEEE
T ss_pred cCCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCCCCc---------cccCCCCchh---hhhhh-----hhhhhhhhcc
Confidence 46999998863 56777788888999996554433211 1111001111 22222 4567999999
Q ss_pred cCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCC-CcCCCcccCCCCCCCcccccCCCCCCCCCch
Q 001557 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPG-IEFHHIVRHNGDVDGEVERDEGSPASPDPPI 462 (1054)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnG-ID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1054)
+|+...+.+.+. +. +..+|.++-+- +|.-...... ..+.
T Consensus 129 ~t~~~~~~L~~~--G~---------------------~~~rI~~vG~~~~D~l~~~~~~----------------~~~~- 168 (346)
T PF02350_consen 129 PTEEARERLLQE--GE---------------------PPERIFVVGNPGIDALLQNKEE----------------IEEK- 168 (346)
T ss_dssp SSHHHHHHHHHT--T-----------------------GGGEEE---HHHHHHHHHHHT----------------TCC--
T ss_pred CCHHHHHHHHhc--CC---------------------CCCeEEEEChHHHHHHHHhHHH----------------Hhhh-
Confidence 999888776442 22 22378877663 3432111100 0000
Q ss_pred hHHHhhhcCCCCCcEEEEEeCCCC----CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHH
Q 001557 463 WSEIMHFFSNPRKPMILALARPDP----KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLID 538 (1054)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vgRld~----~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~ 538 (1054)
.. ...+.....++++|...-... ......+.+++..+.+. ....+.+.+.+-| .....+.+.+.
T Consensus 169 ~~-~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p----------~~~~~i~~~l~ 236 (346)
T PF02350_consen 169 YK-NSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER-QNVPVIFPLHNNP----------RGSDIIIEKLK 236 (346)
T ss_dssp HH-HHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEEEEEE--S-H----------HHHHHHHHHHT
T ss_pred hh-hHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCCcEEEEecCCc----------hHHHHHHHHhc
Confidence 00 011211245566555543222 23456777777777543 2223333334322 22344555555
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHH-HHHHcCCCEEEcc-ccCcccceeeCCceEEeC
Q 001557 539 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLI-EAAAYGLPIVATK-NGGPVDIHRVLDNGLLVD 616 (1054)
Q Consensus 539 ~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~-EAmA~G~PVIat~-~Gg~~eiv~~~~~Gllv~ 616 (1054)
++ +++.+..+++..++..+++.| +++|- ..| .+. ||..+|+|+|.-. .|.-++.+..+ ...+|.
T Consensus 237 ~~---~~v~~~~~l~~~~~l~ll~~a----~~vvg-----dSs-GI~eEa~~lg~P~v~iR~~geRqe~r~~~-~nvlv~ 302 (346)
T PF02350_consen 237 KY---DNVRLIEPLGYEEYLSLLKNA----DLVVG-----DSS-GIQEEAPSLGKPVVNIRDSGERQEGRERG-SNVLVG 302 (346)
T ss_dssp T----TTEEEE----HHHHHHHHHHE----SEEEE-----SSH-HHHHHGGGGT--EEECSSS-S-HHHHHTT-SEEEET
T ss_pred cc---CCEEEECCCCHHHHHHHHhcc----eEEEE-----cCc-cHHHHHHHhCCeEEEecCCCCCHHHHhhc-ceEEeC
Confidence 55 389999999999999999999 78763 236 666 9999999999985 45555655544 445575
Q ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 001557 617 PHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRI 664 (1054)
Q Consensus 617 p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l 664 (1054)
.|.++|.++|.+++.+++.+.++.. ....|.=...+++..+++
T Consensus 303 -~~~~~I~~ai~~~l~~~~~~~~~~~----~~npYgdG~as~rI~~~L 345 (346)
T PF02350_consen 303 -TDPEAIIQAIEKALSDKDFYRKLKN----RPNPYGDGNASERIVEIL 345 (346)
T ss_dssp -SSHHHHHHHHHHHHH-HHHHHHHHC----S--TT-SS-HHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHhChHHHHhhcc----CCCCCCCCcHHHHHHHhh
Confidence 7999999999999987544433221 113454445555555554
No 168
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=97.92 E-value=2.5e-05 Score=83.23 Aligned_cols=52 Identities=23% Similarity=0.286 Sum_probs=45.9
Q ss_pred EEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEec
Q 001557 947 KLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 1001 (1054)
Q Consensus 947 ~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMg 1001 (1054)
.+-.+-.+-+|..+|+.++..+|++++++++ .||+.| | ++||+.+|++||..
T Consensus 135 v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a-~gDs~n-D-lpml~~ag~~ia~n 186 (212)
T COG0560 135 VVGPICDGEGKAKALRELAAELGIPLEETVA-YGDSAN-D-LPMLEAAGLPIAVN 186 (212)
T ss_pred eeeeecCcchHHHHHHHHHHHcCCCHHHeEE-EcCchh-h-HHHHHhCCCCeEeC
Confidence 3444555568999999999999999999999 999999 9 99999999999995
No 169
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.87 E-value=3.1e-05 Score=84.62 Aligned_cols=72 Identities=18% Similarity=0.012 Sum_probs=58.4
Q ss_pred CCCEEEEEEecCCC-C--hhh---HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCc
Q 001557 767 RRKYVFVIAADCDT-T--SDF---LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGS 840 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL-~--~~i---~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa 840 (1054)
...++||||+|||| + +.+ ++.+.++|++|+++ |+.++|+|+++...+...++.+|+. .-|| .|+++|.
T Consensus 124 ~~~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~Lkek----GikLaIaTS~~Re~v~~~L~~lGLd-~YFd-vIIs~Gd 197 (301)
T TIGR01684 124 EPPHVVVFDLDSTLITDEEPVRIRDPRIYDSLTELKKR----GCILVLWSYGDRDHVVESMRKVKLD-RYFD-IIISGGH 197 (301)
T ss_pred ccceEEEEecCCCCcCCCCccccCCHHHHHHHHHHHHC----CCEEEEEECCCHHHHHHHHHHcCCC-cccC-EEEECCc
Confidence 44599999999999 2 334 59999999999997 9999999999999999999999995 2345 4555776
Q ss_pred EEEc
Q 001557 841 ELYY 844 (1054)
Q Consensus 841 ~I~~ 844 (1054)
....
T Consensus 198 v~~~ 201 (301)
T TIGR01684 198 KAEE 201 (301)
T ss_pred cccC
Confidence 6554
No 170
>PLN02448 UDP-glycosyltransferase family protein
Probab=97.85 E-value=0.026 Score=67.71 Aligned_cols=142 Identities=9% Similarity=0.034 Sum_probs=80.0
Q ss_pred CCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001557 474 RKPMILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKH 551 (1054)
Q Consensus 474 ~~~~Il~vgRld~--~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~ 551 (1054)
+..+++++|.... .+-+..++++++.+. ..+.+++. .+ .. .+.+. . .+++.+.++
T Consensus 274 ~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~-----~~~lw~~~-~~-~~-----------~~~~~---~--~~~~~v~~w 330 (459)
T PLN02448 274 GSVLYVSLGSFLSVSSAQMDEIAAGLRDSG-----VRFLWVAR-GE-AS-----------RLKEI---C--GDMGLVVPW 330 (459)
T ss_pred CceEEEeecccccCCHHHHHHHHHHHHhCC-----CCEEEEEc-Cc-hh-----------hHhHh---c--cCCEEEecc
Confidence 3456778887632 233566777776652 24433332 21 00 01111 1 135667788
Q ss_pred CCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccc----eee-CCceEEeC-------CCC
Q 001557 552 HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDI----HRV-LDNGLLVD-------PHD 619 (1054)
Q Consensus 552 ~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~ei----v~~-~~~Gllv~-------p~d 619 (1054)
.|+.+ ++..++ .++||. -+-..+++||+++|+|+|+-...+=.-. +.+ .+.|+-+. .-+
T Consensus 331 ~pQ~~---iL~h~~--v~~fvt----HgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~ 401 (459)
T PLN02448 331 CDQLK---VLCHSS--VGGFWT----HCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVG 401 (459)
T ss_pred CCHHH---HhccCc--cceEEe----cCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcCc
Confidence 88775 444441 023552 2334588999999999999886543222 222 23566653 237
Q ss_pred HHHHHHHHHHHHhCH-HHHHHHHHHHHHH
Q 001557 620 QQSIADALLKLVSDK-QLWERCRQNGLKN 647 (1054)
Q Consensus 620 ~~~la~aI~~ll~d~-~~~~~~~~~~~~~ 647 (1054)
.+++++++++++.++ ++..++++++.+.
T Consensus 402 ~~~l~~av~~vl~~~~~~~~~~r~~a~~~ 430 (459)
T PLN02448 402 REEIAELVKRFMDLESEEGKEMRRRAKEL 430 (459)
T ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 899999999999864 3444555555443
No 171
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=97.84 E-value=3.3e-05 Score=74.84 Aligned_cols=54 Identities=11% Similarity=0.007 Sum_probs=43.7
Q ss_pred EEEEEEecCCCC----h-----hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHH---------------HHHHHHHhCC
Q 001557 770 YVFVIAADCDTT----S-----DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTIL---------------ELHSLLVSGG 825 (1054)
Q Consensus 770 kLiv~DiDGTL~----~-----~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~---------------~i~~~l~~l~ 825 (1054)
|+|++|+||||. + .+.+.++++|++++++ |+.|+++|||+.. .+..||.+.+
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~----G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ 77 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKAL----GFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHN 77 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHC----CCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcC
Confidence 689999999992 1 2457888888888776 8999999999876 4468888888
Q ss_pred CC
Q 001557 826 LS 827 (1054)
Q Consensus 826 l~ 827 (1054)
++
T Consensus 78 ip 79 (126)
T TIGR01689 78 VP 79 (126)
T ss_pred CC
Confidence 85
No 172
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.78 E-value=0.0023 Score=72.63 Aligned_cols=274 Identities=18% Similarity=0.198 Sum_probs=171.1
Q ss_pred CcceEEEEcCC-CchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEe
Q 001557 305 IWPVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 383 (1054)
Q Consensus 305 ~~pDVIh~h~~-~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~ 383 (1054)
.+||+|..|.- .+.+++++.+...+||+.+---++-. +... ..--+.|++ .-.-|+.-++
T Consensus 91 ~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt---------~~~~-----~PEE~NR~l-----~~~~S~~hfa 151 (383)
T COG0381 91 EKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRT---------GDLY-----FPEEINRRL-----TSHLSDLHFA 151 (383)
T ss_pred hCCCEEEEeCCcchHHHHHHHHHHhCCceEEEeccccc---------CCCC-----CcHHHHHHH-----HHHhhhhhcC
Confidence 67999988863 55667788888889999886665411 1111 001112332 4456888899
Q ss_pred cCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCC-cCCCcccCCCCCCCcccccCCCCCCCCCch
Q 001557 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGI-EFHHIVRHNGDVDGEVERDEGSPASPDPPI 462 (1054)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGI-D~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1054)
+|....+.+.+ .|.+..++.|+.|-+ |.-....... ......
T Consensus 152 pte~ar~nLl~-----------------------EG~~~~~IfvtGnt~iDal~~~~~~~--------------~~~~~~ 194 (383)
T COG0381 152 PTEIARKNLLR-----------------------EGVPEKRIFVTGNTVIDALLNTRDRV--------------LEDSKI 194 (383)
T ss_pred ChHHHHHHHHH-----------------------cCCCccceEEeCChHHHHHHHHHhhh--------------ccchhh
Confidence 99877666532 233334788888864 3222210000 001111
Q ss_pred hHHHhhhcCCCCCcEEEEEe-CCCC-CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHH-HHH
Q 001557 463 WSEIMHFFSNPRKPMILALA-RPDP-KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKL-IDK 539 (1054)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vg-Rld~-~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l-~~~ 539 (1054)
.. .++...++++|+..+ |-.- .+++..+++|+.++.+.. +++.+|.-..+. ..++.. ...
T Consensus 195 ~~---~~~~~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~--~~~~viyp~H~~------------~~v~e~~~~~ 257 (383)
T COG0381 195 LA---KGLDDKDKKYILVTAHRRENVGEPLEEICEALREIAEEY--PDVIVIYPVHPR------------PRVRELVLKR 257 (383)
T ss_pred HH---hhhccccCcEEEEEcchhhcccccHHHHHHHHHHHHHhC--CCceEEEeCCCC------------hhhhHHHHHH
Confidence 11 112344555655544 3332 288899999998887544 566666665543 122233 355
Q ss_pred cCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccc-cCcccceeeCCceEEeCCC
Q 001557 540 YDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN-GGPVDIHRVLDNGLLVDPH 618 (1054)
Q Consensus 540 ~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~-Gg~~eiv~~~~~Gllv~p~ 618 (1054)
++-.++|.+...+...+...|+..| .++++ -.|-..-||-..|+||++-+. ..-+|-+.. +.-.+|. .
T Consensus 258 L~~~~~v~li~pl~~~~f~~L~~~a-----~~ilt----DSGgiqEEAp~lg~Pvl~lR~~TERPE~v~a-gt~~lvg-~ 326 (383)
T COG0381 258 LKNVERVKLIDPLGYLDFHNLMKNA-----FLILT----DSGGIQEEAPSLGKPVLVLRDTTERPEGVEA-GTNILVG-T 326 (383)
T ss_pred hCCCCcEEEeCCcchHHHHHHHHhc-----eEEEe----cCCchhhhHHhcCCcEEeeccCCCCccceec-CceEEeC-c
Confidence 6656679999999999999999999 55655 337778899999999998774 344565543 4556775 5
Q ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 001557 619 DQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISS 666 (1054)
Q Consensus 619 d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~ 666 (1054)
+.+.+.+++.+++++++..++|+... ..|.=...++++++.+..
T Consensus 327 ~~~~i~~~~~~ll~~~~~~~~m~~~~----npYgdg~as~rIv~~l~~ 370 (383)
T COG0381 327 DEENILDAATELLEDEEFYERMSNAK----NPYGDGNASERIVEILLN 370 (383)
T ss_pred cHHHHHHHHHHHhhChHHHHHHhccc----CCCcCcchHHHHHHHHHH
Confidence 88999999999999998877655422 356555566666666653
No 173
>PRK10444 UMP phosphatase; Provisional
Probab=97.77 E-value=0.00033 Score=76.74 Aligned_cols=64 Identities=9% Similarity=-0.009 Sum_probs=50.4
Q ss_pred EEEEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHH---HHHhCCCCCCCCcEEEEcC
Q 001557 770 YVFVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHS---LLVSGGLSPLAFDAFICNS 838 (1054)
Q Consensus 770 kLiv~DiDGTL--~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~---~l~~l~l~~~~~d~lI~~n 838 (1054)
++|+||+|||| ...+.+.+.++|++|+++ |+.|+++|+|+.....+ .|..+|++. +++-++++.
T Consensus 2 ~~v~~DlDGtL~~~~~~~p~a~~~l~~L~~~----g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~-~~~~i~ts~ 70 (248)
T PRK10444 2 KNVICDIDGVLMHDNVAVPGAAEFLHRILDK----GLPLVLLTNYPSQTGQDLANRFATAGVDV-PDSVFYTSA 70 (248)
T ss_pred cEEEEeCCCceEeCCeeCccHHHHHHHHHHC----CCeEEEEeCCCCCCHHHHHHHHHHcCCCC-CHhhEecHH
Confidence 68999999999 457888999999999997 89999999998765544 455678863 355566653
No 174
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.76 E-value=0.00018 Score=84.33 Aligned_cols=185 Identities=11% Similarity=0.062 Sum_probs=116.0
Q ss_pred hHHHhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCC
Q 001557 463 WSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDL 542 (1054)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l 542 (1054)
...+..+..+.+..+++++.++ .|=-+..++++.++.+.- |+-+|++...+.. -...+.+.+.+.|+
T Consensus 273 ~~~R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~v--P~S~L~L~~~~~~---------~~~~l~~~~~~~Gv 339 (468)
T PF13844_consen 273 VTTRAQYGLPEDAVVFGSFNNL--FKISPETLDLWARILKAV--PNSRLWLLRFPAS---------GEARLRRRFAAHGV 339 (468)
T ss_dssp EEETGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHHHHHS--TTEEEEEEETSTT---------HHHHHHHHHHHTTS
T ss_pred ccCHHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHHHHhC--CCcEEEEeeCCHH---------HHHHHHHHHHHcCC
Confidence 4455667777776666666655 677788999998886444 4444433333221 12567788888888
Q ss_pred C-CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCccc-----ceee-CCceEEe
Q 001557 543 Y-GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD-----IHRV-LDNGLLV 615 (1054)
Q Consensus 543 ~-~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~e-----iv~~-~~~Gllv 615 (1054)
. +++.|.+..+.++-...|+.+ ||+|=|..+- -+.+.+||+.+|+|||+-.-..... ++.. |-.-++.
T Consensus 340 ~~~Ri~f~~~~~~~ehl~~~~~~----DI~LDT~p~n-G~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA 414 (468)
T PF13844_consen 340 DPDRIIFSPVAPREEHLRRYQLA----DICLDTFPYN-GGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIA 414 (468)
T ss_dssp -GGGEEEEE---HHHHHHHGGG-----SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-
T ss_pred ChhhEEEcCCCCHHHHHHHhhhC----CEEeeCCCCC-CcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcC
Confidence 6 579998888877888888888 9999874333 3789999999999999865322211 1111 1122334
Q ss_pred CCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-h--cCCHHHHHHHHHHHHHHh
Q 001557 616 DPHDQQSIADALLKLVSDKQLWERCRQNGLKNI-H--QFSWPEHCKSYLSRISSC 667 (1054)
Q Consensus 616 ~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~--~fsw~~~a~~yl~~l~~~ 667 (1054)
. |.++..+.-.++.+|++.++++++..++.. + .|+-..+++.+.+.|+.+
T Consensus 415 ~--s~~eYv~~Av~La~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m 467 (468)
T PF13844_consen 415 D--SEEEYVEIAVRLATDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM 467 (468)
T ss_dssp S--SHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred C--CHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence 3 889999988899999999999999998776 3 699999999999998764
No 175
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=97.74 E-value=0.0023 Score=75.28 Aligned_cols=105 Identities=16% Similarity=0.184 Sum_probs=74.1
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc----cceeeCCceEEeC
Q 001557 541 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV----DIHRVLDNGLLVD 616 (1054)
Q Consensus 541 ~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~----eiv~~~~~Gllv~ 616 (1054)
++..++...+++|+. +++..| |++|.. |-..+..||+.+|+|+|+-..+.=. +-++..+.|..+.
T Consensus 281 ~~p~n~~v~~~~p~~---~~l~~a----d~vI~h----GG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~ 349 (406)
T COG1819 281 NVPDNVIVADYVPQL---ELLPRA----DAVIHH----GGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALP 349 (406)
T ss_pred cCCCceEEecCCCHH---HHhhhc----CEEEec----CCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecC
Confidence 456688888888766 588899 999976 3345778999999999998876322 2344556787776
Q ss_pred --CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHH
Q 001557 617 --PHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHC 657 (1054)
Q Consensus 617 --p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a 657 (1054)
+.+.+.++++|.++|+|+... +..+..++..+...-.+.+
T Consensus 350 ~~~l~~~~l~~av~~vL~~~~~~-~~~~~~~~~~~~~~g~~~~ 391 (406)
T COG1819 350 FEELTEERLRAAVNEVLADDSYR-RAAERLAEEFKEEDGPAKA 391 (406)
T ss_pred cccCCHHHHHHHHHHHhcCHHHH-HHHHHHHHHhhhcccHHHH
Confidence 689999999999999987644 3444444454333333333
No 176
>PLN03007 UDP-glucosyltransferase family protein
Probab=97.74 E-value=0.099 Score=63.12 Aligned_cols=140 Identities=16% Similarity=0.176 Sum_probs=76.7
Q ss_pred CCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001557 474 RKPMILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKH 551 (1054)
Q Consensus 474 ~~~~Il~vgRld~--~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~ 551 (1054)
+..+.+++|.... .+.+..++++++.+. .++.++++......... ..+-..+.+... ...+...++
T Consensus 285 ~svvyvsfGS~~~~~~~~~~~~~~~l~~~~-----~~flw~~~~~~~~~~~~---~~lp~~~~~r~~----~~g~~v~~w 352 (482)
T PLN03007 285 DSVIYLSFGSVASFKNEQLFEIAAGLEGSG-----QNFIWVVRKNENQGEKE---EWLPEGFEERTK----GKGLIIRGW 352 (482)
T ss_pred CceEEEeecCCcCCCHHHHHHHHHHHHHCC-----CCEEEEEecCCcccchh---hcCCHHHHHHhc----cCCEEEecC
Confidence 4466788887643 345666666666552 35555666422110000 000011111111 245777889
Q ss_pred CCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccce-----eeCCceEEe--------C--
Q 001557 552 HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIH-----RVLDNGLLV--------D-- 616 (1054)
Q Consensus 552 ~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv-----~~~~~Gllv--------~-- 616 (1054)
+|+. .++..++ .++||.= -| -.+++||+++|+|+|+-...+=.-.- +...-|+-+ +
T Consensus 353 ~PQ~---~iL~h~~--v~~fvtH---~G-~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~ 423 (482)
T PLN03007 353 APQV---LILDHQA--TGGFVTH---CG-WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGD 423 (482)
T ss_pred CCHH---HHhccCc--cceeeec---Cc-chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccC
Confidence 8875 5666651 0235421 23 35889999999999998864322211 111234333 1
Q ss_pred CCCHHHHHHHHHHHHhCH
Q 001557 617 PHDQQSIADALLKLVSDK 634 (1054)
Q Consensus 617 p~d~~~la~aI~~ll~d~ 634 (1054)
.-+.++++++|++++.++
T Consensus 424 ~~~~~~l~~av~~~m~~~ 441 (482)
T PLN03007 424 FISREKVEKAVREVIVGE 441 (482)
T ss_pred cccHHHHHHHHHHHhcCc
Confidence 237889999999999875
No 177
>PLN02208 glycosyltransferase family protein
Probab=97.68 E-value=0.085 Score=62.81 Aligned_cols=111 Identities=14% Similarity=0.099 Sum_probs=66.7
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc----cc-eeeCCceEEeCC--
Q 001557 545 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV----DI-HRVLDNGLLVDP-- 617 (1054)
Q Consensus 545 ~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~----ei-v~~~~~Gllv~p-- 617 (1054)
.+.+.++.|+.+ +++..+ .++|| + -+--.+++||+++|+|+|+-..-+=. .+ +...+-|+.++.
T Consensus 312 g~~v~~W~PQ~~---iL~H~~--v~~Fv--t--HcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~ 382 (442)
T PLN02208 312 GVVWGGWVQQPL---ILDHPS--IGCFV--N--HCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREK 382 (442)
T ss_pred CcEeeccCCHHH---HhcCCc--cCeEE--c--cCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecccc
Confidence 455678888875 444441 13444 2 12236889999999999998753321 22 222355777753
Q ss_pred ---CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHH----hcCCHHHHHHHHHHHH
Q 001557 618 ---HDQQSIADALLKLVSDK-QLWERCRQNGLKNI----HQFSWPEHCKSYLSRI 664 (1054)
Q Consensus 618 ---~d~~~la~aI~~ll~d~-~~~~~~~~~~~~~v----~~fsw~~~a~~yl~~l 664 (1054)
-+.++++.+|.++++++ ++.+++++++.+.- +.-|-....++|++.+
T Consensus 383 ~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~~~gsS~~~l~~~v~~l 437 (442)
T PLN02208 383 TGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILVSPGLLTGYVDKFVEEL 437 (442)
T ss_pred CCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 37789999999999865 34556666665443 2223333444554444
No 178
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.61 E-value=0.00013 Score=79.97 Aligned_cols=74 Identities=15% Similarity=-0.018 Sum_probs=59.4
Q ss_pred cCCCEEEEEEecCCC---Chhh---HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCC
Q 001557 766 RRRKYVFVIAADCDT---TSDF---LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSG 839 (1054)
Q Consensus 766 ~~~kkLiv~DiDGTL---~~~i---~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nG 839 (1054)
....|+|+||+|||| +..+ .+.+.++|++|+++ |+.++|+|+.+...+...++.+|+. .-||. |+++|
T Consensus 125 ~~~~~~i~~D~D~TL~~~~~~v~irdp~V~EtL~eLkek----GikLaIvTNg~Re~v~~~Le~lgL~-~yFDv-II~~g 198 (303)
T PHA03398 125 WEIPHVIVFDLDSTLITDEEPVRIRDPFVYDSLDELKER----GCVLVLWSYGNREHVVHSLKETKLE-GYFDI-IICGG 198 (303)
T ss_pred eeeccEEEEecCCCccCCCCccccCChhHHHHHHHHHHC----CCEEEEEcCCChHHHHHHHHHcCCC-ccccE-EEECC
Confidence 456799999999999 3445 68999999999997 9999999988888889999999995 23454 55577
Q ss_pred cEEEcC
Q 001557 840 SELYYP 845 (1054)
Q Consensus 840 a~I~~~ 845 (1054)
......
T Consensus 199 ~i~~k~ 204 (303)
T PHA03398 199 RKAGEY 204 (303)
T ss_pred Cccccc
Confidence 766544
No 179
>PLN02670 transferase, transferring glycosyl groups
Probab=97.50 E-value=0.16 Score=60.93 Aligned_cols=185 Identities=12% Similarity=0.103 Sum_probs=100.3
Q ss_pred hHHHhhhcCCC--CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHH
Q 001557 463 WSEIMHFFSNP--RKPMILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLID 538 (1054)
Q Consensus 463 ~~~~~~~~~~~--~~~~Il~vgRld--~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~ 538 (1054)
|.....++... ..-+.+++|.+. ..+-+..+..+++.+. . .+..++....... ......+-..+..
T Consensus 265 ~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~----~-~FlWv~r~~~~~~--~~~~~~lp~~f~~--- 334 (472)
T PLN02670 265 WVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSE----T-PFFWVLRNEPGTT--QNALEMLPDGFEE--- 334 (472)
T ss_pred hHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCC----C-CEEEEEcCCcccc--cchhhcCChHHHH---
Confidence 34455555332 345667778764 3345666777777663 1 4434554211100 0000000011111
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc----cceeeCCceEE
Q 001557 539 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV----DIHRVLDNGLL 614 (1054)
Q Consensus 539 ~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~----eiv~~~~~Gll 614 (1054)
+..-. -+.+.++.|+.+ ++...+ .++||. -+--.+++||+++|+|+|+-...+=. ..+...+.|+.
T Consensus 335 ~~~~r-G~vv~~W~PQ~~---IL~H~~--v~~Fvt----HcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~ 404 (472)
T PLN02670 335 RVKGR-GMIHVGWVPQVK---ILSHES--VGGFLT----HCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLE 404 (472)
T ss_pred hccCC-CeEEeCcCCHHH---HhcCcc--cceeee----cCCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEE
Confidence 11111 255678888775 444441 133552 12346889999999999998754321 22233467877
Q ss_pred eCC------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH----hcCCHHHHHHHHHHHHHHhh
Q 001557 615 VDP------HDQQSIADALLKLVSDKQLWERCRQNGLKNI----HQFSWPEHCKSYLSRISSCK 668 (1054)
Q Consensus 615 v~p------~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v----~~fsw~~~a~~yl~~l~~~~ 668 (1054)
++. -+.+++.++|++++.+++ -.++++++++.. ..=.-.+.++.+++.+.+..
T Consensus 405 l~~~~~~~~~~~e~i~~av~~vm~~~~-g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~~ 467 (472)
T PLN02670 405 VPRDERDGSFTSDSVAESVRLAMVDDA-GEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLRENR 467 (472)
T ss_pred eeccccCCcCcHHHHHHHHHHHhcCcc-hHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHhc
Confidence 753 358999999999998642 234555555443 24466667777777666543
No 180
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=97.44 E-value=0.31 Score=57.71 Aligned_cols=89 Identities=9% Similarity=0.095 Sum_probs=57.7
Q ss_pred CCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccc----cCcccceeeCCceEEeC--CCCHHH
Q 001557 549 PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN----GGPVDIHRVLDNGLLVD--PHDQQS 622 (1054)
Q Consensus 549 ~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~----Gg~~eiv~~~~~Gllv~--p~d~~~ 622 (1054)
....+..++..++..| |++|-.-+ -.++=|+++|+|+|+-.. -++-+.+. -..++++ .-+.++
T Consensus 313 ~~~~~~~e~~~iIs~~----dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~lg--~~~~~~~~~~l~~~~ 381 (426)
T PRK10017 313 MDELNDLEMGKILGAC----ELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQLG--LPEMAIDIRHLLDGS 381 (426)
T ss_pred cCCCChHHHHHHHhhC----CEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHcC--CccEEechhhCCHHH
Confidence 3334456888999999 99885432 357889999999998663 12222221 1223343 446788
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHH
Q 001557 623 IADALLKLVSDKQLWERCRQNGLKNI 648 (1054)
Q Consensus 623 la~aI~~ll~d~~~~~~~~~~~~~~v 648 (1054)
+.+.+.+++++.+..++.-+......
T Consensus 382 Li~~v~~~~~~r~~~~~~l~~~v~~~ 407 (426)
T PRK10017 382 LQAMVADTLGQLPALNARLAEAVSRE 407 (426)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 99999999998877655444444333
No 181
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=97.33 E-value=0.00039 Score=72.88 Aligned_cols=183 Identities=13% Similarity=0.077 Sum_probs=95.8
Q ss_pred HHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHH-hCCCCCCCCcEEEEcCCcEEEcCCCCCCCCCCCccccCccchhhh
Q 001557 789 KKVVEAAGKDNSAGFIGFVLSTALTILELHSLLV-SGGLSPLAFDAFICNSGSELYYPSSSTEDNHGLPFLVDLDYRFHT 867 (1054)
Q Consensus 789 ~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~-~l~l~~~~~d~lI~~nGa~I~~~~~~~~~~~~~~~~~d~~~~~~i 867 (1054)
.++|.+|++ .+.|+++||-.+.-+.+-+. .--+ ..+|++-+.||+..|..+ ... |...+
T Consensus 2 ~~~L~~L~~-----~~~vgvVgGsd~~k~~eQl~~~~~~--~~fdy~f~enG~~~y~~~---------~~~----~~~~~ 61 (220)
T PF03332_consen 2 AELLQKLRK-----KVPVGVVGGSDLPKIQEQLGGDDVL--DNFDYVFPENGLVAYKNG---------ELI----WSQSI 61 (220)
T ss_dssp HHHHHHHHT-----TSEEEEEESS-HHHHHHHHSTTTHH--HH-SEEEEGGGTEEEETT---------EEE----EE--H
T ss_pred HHHHHHHHh-----cCeEEEEcchhHHHHHHHHcccchH--hhCCeeecCCCCeEEECC---------Cch----hhHhH
Confidence 567888886 58999999999988776663 2112 357899999999999764 222 22222
Q ss_pred ccccChhhHHHHHHH----hhhhccCCCCccCcccccccccCcceEEEEEe--cCCCCC-----------c-cHHHHHHH
Q 001557 868 EYRWGGEGLRKTLVR----WAASVNDKKGEEGKIVEEDESRSTIHCYAFEV--TNPQMI-----------P-PVKELRKL 929 (1054)
Q Consensus 868 ~~~w~~e~l~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~kis~~~--~~~~~~-----------~-~~~el~~~ 929 (1054)
......+.+++++.- +.......+ .-.++|.. .-.+.|.- ++.... . .-+.+.+.
T Consensus 62 ~~~lgee~~~~~in~~l~~~~~l~lp~k---rGtfIE~R----~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~ 134 (220)
T PF03332_consen 62 AEFLGEEKLQKLINFCLRYISDLDLPVK---RGTFIEFR----GGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEA 134 (220)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT---S------S-SEEEE----SSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHcCHHHHHHHHHHHHHHHHhCCCCcc---CCCceeec----CCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHH
Confidence 222222333333321 111111111 01112211 11222221 111000 0 01234455
Q ss_pred HHHhcCeEEEEEe-eCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCc----CCCccccccccCc-ceEEEecCc
Q 001557 930 MRIQALRCHVIYC-QNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGE----CGDTDYEGLLGGV-HKTVILKGV 1003 (1054)
Q Consensus 930 l~~~~~~~~v~~s-~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD----~~d~D~~eML~~a-g~gVaMgNa 1003 (1054)
|+.....+.+.++ ++...+||.|+|.+|..+|++|.+.. .+ .|.|+|| +|| | .+.+... -.|+.|.+=
T Consensus 135 L~~~f~d~~L~~siGGqiSiDvfp~GwDKty~Lr~l~~~~---~~-~I~FfGDkt~pGGN-D-yei~~~~rt~g~~V~~p 208 (220)
T PF03332_consen 135 LKKEFPDFGLTFSIGGQISIDVFPKGWDKTYCLRHLEDEG---FD-EIHFFGDKTFPGGN-D-YEIFEDPRTIGHTVTSP 208 (220)
T ss_dssp HHHHTCCCSEEEEEETTTEEEEEETT-SGGGGGGGTTTTT----S-EEEEEESS-STTST-T-HHHHHSTTSEEEE-SSH
T ss_pred HHHHCCCCceEEecCCceEEccccCCccHHHHHHHHHhcc---cc-eEEEEehhccCCCC-C-ceeeecCCccEEEeCCH
Confidence 5656565555444 44568999999999999999997743 33 5566887 578 8 7777654 357777643
Q ss_pred c
Q 001557 1004 G 1004 (1054)
Q Consensus 1004 ~ 1004 (1054)
.
T Consensus 209 ~ 209 (220)
T PF03332_consen 209 E 209 (220)
T ss_dssp H
T ss_pred H
Confidence 3
No 182
>PLN02562 UDP-glycosyltransferase
Probab=97.29 E-value=0.22 Score=59.49 Aligned_cols=137 Identities=12% Similarity=0.117 Sum_probs=80.3
Q ss_pred CcEEEEEeCCC---CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001557 475 KPMILALARPD---PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKH 551 (1054)
Q Consensus 475 ~~~Il~vgRld---~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~ 551 (1054)
..+++++|... +.+-+..++.+++.+. . .+.+++..... ..+.. ...++. .+++.+.++
T Consensus 274 svvyvsfGS~~~~~~~~~~~~l~~~l~~~g----~-~fiW~~~~~~~-~~l~~----------~~~~~~--~~~~~v~~w 335 (448)
T PLN02562 274 SVIYISFGSWVSPIGESNVRTLALALEASG----R-PFIWVLNPVWR-EGLPP----------GYVERV--SKQGKVVSW 335 (448)
T ss_pred ceEEEEecccccCCCHHHHHHHHHHHHHCC----C-CEEEEEcCCch-hhCCH----------HHHHHh--ccCEEEEec
Confidence 45778888853 4455777778877763 1 34344443210 01110 111111 246677788
Q ss_pred CCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc----cceee-CCceEEeCCCCHHHHHHH
Q 001557 552 HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV----DIHRV-LDNGLLVDPHDQQSIADA 626 (1054)
Q Consensus 552 ~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~----eiv~~-~~~Gllv~p~d~~~la~a 626 (1054)
+|+.+ ++...+ .++||. -+--.+.+||+.+|+|+|+-...+=. ..+.+ ...|+-+..-+.++++++
T Consensus 336 ~PQ~~---iL~h~~--v~~fvt----H~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~l~~~ 406 (448)
T PLN02562 336 APQLE---VLKHQA--VGCYLT----HCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFGQKEVEEG 406 (448)
T ss_pred CCHHH---HhCCCc--cceEEe----cCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCCHHHHHHH
Confidence 88774 454440 034442 12246889999999999998754322 12221 245676655688999999
Q ss_pred HHHHHhCHHHHH
Q 001557 627 LLKLVSDKQLWE 638 (1054)
Q Consensus 627 I~~ll~d~~~~~ 638 (1054)
|++++.+++.++
T Consensus 407 v~~~l~~~~~r~ 418 (448)
T PLN02562 407 LRKVMEDSGMGE 418 (448)
T ss_pred HHHHhCCHHHHH
Confidence 999998865433
No 183
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.26 E-value=0.025 Score=65.33 Aligned_cols=145 Identities=19% Similarity=0.275 Sum_probs=89.0
Q ss_pred CCCCCcEEEEE--eCCCC-CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEE
Q 001557 471 SNPRKPMILAL--ARPDP-KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVA 547 (1054)
Q Consensus 471 ~~~~~~~Il~v--gRld~-~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~ 547 (1054)
.++++++|..+ +|-.+ ++.++.+++++..+.+ ..+++.+++...+.. ....+.......+....+.
T Consensus 180 l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~--~~p~l~fvvp~a~~~---------~~~~i~~~~~~~~~~~~~~ 248 (373)
T PF02684_consen 180 LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKK--QRPDLQFVVPVAPEV---------HEELIEEILAEYPPDVSIV 248 (373)
T ss_pred CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHH--hCCCeEEEEecCCHH---------HHHHHHHHHHhhCCCCeEE
Confidence 45677765444 34443 4566889999999964 446677666544321 1222444444444322232
Q ss_pred eCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcc-cc----------------CcccceeeCC
Q 001557 548 YPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK-NG----------------GPVDIHRVLD 610 (1054)
Q Consensus 548 ~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~-~G----------------g~~eiv~~~~ 610 (1054)
.. ..+-.+.++.| |+.+..| |.+.+|++.+|+|.|..- .. +.+.|+.+..
T Consensus 249 ~~----~~~~~~~m~~a----d~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~ 315 (373)
T PF02684_consen 249 II----EGESYDAMAAA----DAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGRE 315 (373)
T ss_pred Ec----CCchHHHHHhC----cchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCC
Confidence 22 34677899999 9999877 999999999999987643 22 2222221100
Q ss_pred --ceEEeCCCCHHHHHHHHHHHHhCHHHHHH
Q 001557 611 --NGLLVDPHDQQSIADALLKLVSDKQLWER 639 (1054)
Q Consensus 611 --~Gllv~p~d~~~la~aI~~ll~d~~~~~~ 639 (1054)
.=++=+.-+++.++.++..++.|++.++.
T Consensus 316 v~PEliQ~~~~~~~i~~~~~~ll~~~~~~~~ 346 (373)
T PF02684_consen 316 VVPELIQEDATPENIAAELLELLENPEKRKK 346 (373)
T ss_pred cchhhhcccCCHHHHHHHHHHHhcCHHHHHH
Confidence 01222345899999999999999876443
No 184
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=97.25 E-value=0.35 Score=57.77 Aligned_cols=92 Identities=17% Similarity=0.268 Sum_probs=56.9
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc----cceeeC-CceEEe-CC
Q 001557 544 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV----DIHRVL-DNGLLV-DP 617 (1054)
Q Consensus 544 ~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~----eiv~~~-~~Gllv-~p 617 (1054)
++....+++|+.+ ++...+ .++||.= -|+ .+++||+++|+|+|+-...+=. ..+.+. +.|+.+ ..
T Consensus 324 ~~g~v~~w~PQ~~---iL~h~~--v~~fvtH---~G~-nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~ 394 (451)
T PLN02410 324 GRGYIVKWAPQKE---VLSHPA--VGGFWSH---CGW-NSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGD 394 (451)
T ss_pred CCeEEEccCCHHH---HhCCCc--cCeeeec---Cch-hHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCc
Confidence 4556668988875 444431 1456632 233 5788999999999998754322 122111 456666 34
Q ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 001557 618 HDQQSIADALLKLVSDKQLWERCRQNGL 645 (1054)
Q Consensus 618 ~d~~~la~aI~~ll~d~~~~~~~~~~~~ 645 (1054)
-+.++++++|++++.+++ .++++++++
T Consensus 395 ~~~~~v~~av~~lm~~~~-~~~~r~~a~ 421 (451)
T PLN02410 395 LDRGAVERAVKRLMVEEE-GEEMRKRAI 421 (451)
T ss_pred ccHHHHHHHHHHHHcCCc-HHHHHHHHH
Confidence 478899999999998753 233444433
No 185
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=97.18 E-value=0.015 Score=68.52 Aligned_cols=180 Identities=13% Similarity=0.092 Sum_probs=121.9
Q ss_pred cCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCC-CCEEe
Q 001557 470 FSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLY-GQVAY 548 (1054)
Q Consensus 470 ~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~-~~V~~ 548 (1054)
+.+++..+++++ -.+.|-.+.+++-+-++.+.-|+.-+ ++.|++++ .++...+++++++.|+. .++.|
T Consensus 425 glp~~avVf~c~--~n~~K~~pev~~~wmqIL~~vP~Svl-~L~~~~~~--------~~~~~~l~~la~~~Gv~~eRL~f 493 (620)
T COG3914 425 GLPEDAVVFCCF--NNYFKITPEVFALWMQILSAVPNSVL-LLKAGGDD--------AEINARLRDLAEREGVDSERLRF 493 (620)
T ss_pred CCCCCeEEEEec--CCcccCCHHHHHHHHHHHHhCCCcEE-EEecCCCc--------HHHHHHHHHHHHHcCCChhheee
Confidence 334444333443 45577777777777776543343333 45566543 56789999999999975 57999
Q ss_pred CCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcc-------ccCcccceee-CCceEEeCCCCH
Q 001557 549 PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK-------NGGPVDIHRV-LDNGLLVDPHDQ 620 (1054)
Q Consensus 549 ~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~-------~Gg~~eiv~~-~~~Gllv~p~d~ 620 (1054)
.+..+.++-.+.|..| |+++=+-- -|-..|.+|++.+|+|||+-- +|+. |+.. |..-++++ +.
T Consensus 494 ~p~~~~~~h~a~~~iA----DlvLDTyP-Y~g~TTa~daLwm~vPVlT~~G~~FasR~~~s--i~~~agi~e~vA~--s~ 564 (620)
T COG3914 494 LPPAPNEDHRARYGIA----DLVLDTYP-YGGHTTASDALWMGVPVLTRVGEQFASRNGAS--IATNAGIPELVAD--SR 564 (620)
T ss_pred cCCCCCHHHHHhhchh----heeeeccc-CCCccchHHHHHhcCceeeeccHHHHHhhhHH--HHHhcCCchhhcC--CH
Confidence 9999999999999999 99986632 233689999999999999732 3331 2221 12223343 55
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHH-h--cCCHHHHHHHHHHHHHHhhh
Q 001557 621 QSIADALLKLVSDKQLWERCRQNGLKNI-H--QFSWPEHCKSYLSRISSCKQ 669 (1054)
Q Consensus 621 ~~la~aI~~ll~d~~~~~~~~~~~~~~v-~--~fsw~~~a~~yl~~l~~~~~ 669 (1054)
++..+.-..+-.|...+++.+....+.. . .|+....++++.++|..+-.
T Consensus 565 ~dYV~~av~~g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~~ 616 (620)
T COG3914 565 ADYVEKAVAFGSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMWS 616 (620)
T ss_pred HHHHHHHHHhcccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHHH
Confidence 5555444445557777777777766666 3 69999999999999987754
No 186
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=97.13 E-value=0.21 Score=55.98 Aligned_cols=336 Identities=17% Similarity=0.165 Sum_probs=167.3
Q ss_pred ceEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcC-CCceEEEEEecCcCCCCCCCccCCcccccccccccc
Q 001557 165 KLYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSM-PGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTEN 243 (1054)
Q Consensus 165 ~mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~-~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~ 243 (1054)
.+||++.|.|.+ |- |.-+....+|.+|.+. .| .+|.++|.....+...
T Consensus 9 ~~Ri~~Yshd~~--------Gl-----GHlrR~~~Ia~aLv~d~~~-~~Il~IsG~~~~~~F~----------------- 57 (400)
T COG4671 9 RPRILFYSHDLL--------GL-----GHLRRALRIAHALVEDYLG-FDILIISGGPPAGGFP----------------- 57 (400)
T ss_pred cceEEEEehhhc--------cc-----hHHHHHHHHHHHHhhcccC-ceEEEEeCCCccCCCC-----------------
Confidence 469999996533 32 8889999999999987 45 7999999753211111
Q ss_pred cccccCCCCCeEEEEccCCCCC---cccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHH
Q 001557 244 LMQGLGESSGAYIIRIPFGPKD---KYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDA 320 (1054)
Q Consensus 244 ~~~~~~~~~g~~i~rip~g~~~---~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~ 320 (1054)
...|+..+.+|+-.+. .|-.. .+-.-+.++.. +-.++ +... .+.++|||+.+...+.|.-
T Consensus 58 ------~~~gVd~V~LPsl~k~~~G~~~~~-d~~~~l~e~~~----~Rs~l---il~t---~~~fkPDi~IVd~~P~Glr 120 (400)
T COG4671 58 ------GPAGVDFVKLPSLIKGDNGEYGLV-DLDGDLEETKK----LRSQL---ILST---AETFKPDIFIVDKFPFGLR 120 (400)
T ss_pred ------CcccCceEecCceEecCCCceeee-ecCCCHHHHHH----HHHHH---HHHH---HHhcCCCEEEEeccccchh
Confidence 1248888888873221 11111 11111333322 11111 1111 1237899999987665532
Q ss_pred H------HHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHh
Q 001557 321 A------ALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWR 394 (1054)
Q Consensus 321 a------~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~ 394 (1054)
. .++ +..+.+.|.-..++-..- . ...+-.++-..++.+-++-|.|.+...........
T Consensus 121 ~EL~ptL~yl-~~~~t~~vL~lr~i~D~p-~--------------~~~~~w~~~~~~~~I~r~yD~V~v~GdP~f~d~~~ 184 (400)
T COG4671 121 FELLPTLEYL-KTTGTRLVLGLRSIRDIP-Q--------------ELEADWRRAETVRLINRFYDLVLVYGDPDFYDPLT 184 (400)
T ss_pred hhhhHHHHHH-hhcCCcceeehHhhhhch-h--------------hhccchhhhHHHHHHHHhheEEEEecCccccChhh
Confidence 1 122 223455666555541100 0 00011122223344566788998876544433333
Q ss_pred hhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhHHHhhhcCCCC
Q 001557 395 LYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPR 474 (1054)
Q Consensus 395 ~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (1054)
.|+-. +. + +-.+.+.|.= ..-.+.. ..|..+. +..
T Consensus 185 ~~~~~-~~----i----------------~~k~~ytG~v-q~~~~~~----------------~~p~~~~-------pE~ 219 (400)
T COG4671 185 EFPFA-PA----I----------------RAKMRYTGFV-QRSLPHL----------------PLPPHEA-------PEG 219 (400)
T ss_pred cCCcc-Hh----h----------------hhheeEeEEe-eccCcCC----------------CCCCcCC-------Ccc
Confidence 33321 11 1 1222233321 0000100 0111110 233
Q ss_pred CcEEEEEeCCC-CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCC
Q 001557 475 KPMILALARPD-PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHK 553 (1054)
Q Consensus 475 ~~~Il~vgRld-~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~ 553 (1054)
..+++++|.-. -..=+.+.++|...+..+.+ +..+|.|.-- + ..+.+++.....-.+.|.+..+
T Consensus 220 ~~Ilvs~GGG~dG~eLi~~~l~A~~~l~~l~~--~~~ivtGP~M-----P------~~~r~~l~~~A~~~p~i~I~~f-- 284 (400)
T COG4671 220 FDILVSVGGGADGAELIETALAAAQLLAGLNH--KWLIVTGPFM-----P------EAQRQKLLASAPKRPHISIFEF-- 284 (400)
T ss_pred ceEEEecCCChhhHHHHHHHHHHhhhCCCCCc--ceEEEeCCCC-----C------HHHHHHHHHhcccCCCeEEEEh--
Confidence 55667776432 22223444555554432221 3545656532 2 1233344444433467777777
Q ss_pred CCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCccc--ceeeC---Cce---EEe-CCCCHHHHH
Q 001557 554 QSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD--IHRVL---DNG---LLV-DPHDQQSIA 624 (1054)
Q Consensus 554 ~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~e--iv~~~---~~G---llv-~p~d~~~la 624 (1054)
.+++..|+..| +..|.- -|+ .|.+|-+.+|+|-+.-..+.+.+ +++.. .-| .+. +.-.++.+|
T Consensus 285 ~~~~~~ll~gA----~~vVSm---~GY-NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La 356 (400)
T COG4671 285 RNDFESLLAGA----RLVVSM---GGY-NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLA 356 (400)
T ss_pred hhhHHHHHHhh----heeeec---ccc-hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHH
Confidence 68999999999 887743 244 46779999999987776554443 22110 012 121 222466777
Q ss_pred HHHHHHHh
Q 001557 625 DALLKLVS 632 (1054)
Q Consensus 625 ~aI~~ll~ 632 (1054)
++|..+++
T Consensus 357 ~al~~~l~ 364 (400)
T COG4671 357 DALKAALA 364 (400)
T ss_pred HHHHhccc
Confidence 77777776
No 187
>PLN02173 UDP-glucosyl transferase family protein
Probab=97.13 E-value=0.86 Score=54.38 Aligned_cols=94 Identities=16% Similarity=0.148 Sum_probs=58.3
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc----cceee-CCceEEeCC-
Q 001557 544 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV----DIHRV-LDNGLLVDP- 617 (1054)
Q Consensus 544 ~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~----eiv~~-~~~Gllv~p- 617 (1054)
.++.+.++.|+.+ ++...+ .++||. -+-..+++||+++|+|+|+-...+=. ..+.+ -..|+-+..
T Consensus 317 ~~~~i~~W~PQ~~---iL~H~~--v~~Fvt----HcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~ 387 (449)
T PLN02173 317 DKSLVLKWSPQLQ---VLSNKA--IGCFMT----HCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAE 387 (449)
T ss_pred CceEEeCCCCHHH---HhCCCc--cceEEe----cCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeec
Confidence 4577779988764 555541 135552 23357899999999999998754322 12222 145666532
Q ss_pred -----CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 001557 618 -----HDQQSIADALLKLVSDKQLWERCRQNGLKN 647 (1054)
Q Consensus 618 -----~d~~~la~aI~~ll~d~~~~~~~~~~~~~~ 647 (1054)
-+.+++++++++++.+++ .+++++++.+.
T Consensus 388 ~~~~~~~~e~v~~av~~vm~~~~-~~~~r~~a~~~ 421 (449)
T PLN02173 388 KESGIAKREEIEFSIKEVMEGEK-SKEMKENAGKW 421 (449)
T ss_pred ccCCcccHHHHHHHHHHHhcCCh-HHHHHHHHHHH
Confidence 167999999999997643 24444444433
No 188
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=97.09 E-value=1.2 Score=53.76 Aligned_cols=170 Identities=13% Similarity=0.123 Sum_probs=88.0
Q ss_pred CcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCC
Q 001557 475 KPMILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHH 552 (1054)
Q Consensus 475 ~~~Il~vgRld~--~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~ 552 (1054)
..+.+++|.+.. .+-+..++.+++... ..+.++++...+.... .......+.+... ...+.+.+++
T Consensus 284 svVyvsfGS~~~~~~~~~~ela~gL~~~~-----~~flw~~~~~~~~~~~---~~~lp~~~~~r~~----~~g~~v~~w~ 351 (477)
T PLN02863 284 KVVYVCFGSQVVLTKEQMEALASGLEKSG-----VHFIWCVKEPVNEESD---YSNIPSGFEDRVA----GRGLVIRGWA 351 (477)
T ss_pred ceEEEEeeceecCCHHHHHHHHHHHHhCC-----CcEEEEECCCcccccc---hhhCCHHHHHHhc----cCCEEecCCC
Confidence 446677787642 233666777776552 3454566532211000 0001111222211 2347777898
Q ss_pred CCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCccc----c-eeeCCceEEeC-----CCCHHH
Q 001557 553 KQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD----I-HRVLDNGLLVD-----PHDQQS 622 (1054)
Q Consensus 553 ~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~e----i-v~~~~~Gllv~-----p~d~~~ 622 (1054)
|+. .++...+ .++||.= -| -.+.+||+++|+|+|+-...+=.- . ++..+.|+.+. ..+.++
T Consensus 352 PQ~---~vL~h~~--v~~fvtH---~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~~~~~~ 422 (477)
T PLN02863 352 PQV---AILSHRA--VGAFLTH---CG-WNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVPDSDE 422 (477)
T ss_pred CHH---HHhcCCC--cCeEEec---CC-chHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCCcCHHH
Confidence 875 4555420 1566632 23 357889999999999987543221 1 22235676662 236789
Q ss_pred HHHHHHHHHh-CHHH---HHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 001557 623 IADALLKLVS-DKQL---WERCRQNGLKNI-HQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 623 la~aI~~ll~-d~~~---~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~ 665 (1054)
+++++.+++. +++. .+++++.+++.+ +.=|-.+-.++|++.+.
T Consensus 423 v~~~v~~~m~~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~ 470 (477)
T PLN02863 423 LARVFMESVSENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVV 470 (477)
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHH
Confidence 9999999884 3322 223333334444 22233344455655554
No 189
>PLN00414 glycosyltransferase family protein
Probab=97.06 E-value=0.6 Score=55.71 Aligned_cols=93 Identities=15% Similarity=0.133 Sum_probs=59.8
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc----cce-eeCCceEEeCC---
Q 001557 546 VAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV----DIH-RVLDNGLLVDP--- 617 (1054)
Q Consensus 546 V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~----eiv-~~~~~Gllv~p--- 617 (1054)
..+.+++|+.+ +++.++ .++||.= +-..+++||+++|+|+|+-...+=. ..+ +....|+.+..
T Consensus 314 ~vv~~w~PQ~~---vL~h~~--v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~ 384 (446)
T PLN00414 314 IVWEGWVEQPL---ILSHPS--VGCFVNH----CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDS 384 (446)
T ss_pred eEEeccCCHHH---HhcCCc--cceEEec----CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccC
Confidence 44567888775 444431 1456632 3347889999999999998754322 222 23456776642
Q ss_pred --CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHH
Q 001557 618 --HDQQSIADALLKLVSDK-QLWERCRQNGLKN 647 (1054)
Q Consensus 618 --~d~~~la~aI~~ll~d~-~~~~~~~~~~~~~ 647 (1054)
-+.+++++++++++.++ +..+++++++++.
T Consensus 385 ~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~ 417 (446)
T PLN00414 385 GWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKL 417 (446)
T ss_pred CccCHHHHHHHHHHHhcCChhhHHHHHHHHHHH
Confidence 47899999999999864 4455666666654
No 190
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=96.99 E-value=0.045 Score=62.23 Aligned_cols=151 Identities=14% Similarity=0.118 Sum_probs=87.6
Q ss_pred HhhhcCCCCCcEEEE-Ee-CCCC-CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCC
Q 001557 466 IMHFFSNPRKPMILA-LA-RPDP-KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDL 542 (1054)
Q Consensus 466 ~~~~~~~~~~~~Il~-vg-Rld~-~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l 542 (1054)
+..+..+.+++++.. .| |-.. .+.++.+++|++++.. ..+++.+++--.... +...+....+....
T Consensus 179 r~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~--~~~~~~~vlp~~~~~---------~~~~~~~~~~~~~~ 247 (381)
T COG0763 179 REKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKA--RYPDLKFVLPLVNAK---------YRRIIEEALKWEVA 247 (381)
T ss_pred HHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHh--hCCCceEEEecCcHH---------HHHHHHHHhhcccc
Confidence 444555566665443 34 3332 4567788899999864 445666666544321 11112222222221
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcc-c----------------cCcccc
Q 001557 543 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK-N----------------GGPVDI 605 (1054)
Q Consensus 543 ~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~-~----------------Gg~~ei 605 (1054)
...+.+ ...+-.+.|..| |+.+..| |.+.+|++.+|+|+|++= . -+.+.|
T Consensus 248 ~~~~~~----~~~~~~~a~~~a----D~al~aS-----GT~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNI 314 (381)
T COG0763 248 GLSLIL----IDGEKRKAFAAA----DAALAAS-----GTATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNI 314 (381)
T ss_pred CceEEe----cCchHHHHHHHh----hHHHHhc-----cHHHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHH
Confidence 112222 234677899999 9988776 999999999999987753 2 233333
Q ss_pred eeeCCceEEe-----CCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 001557 606 HRVLDNGLLV-----DPHDQQSIADALLKLVSDKQLWERCRQN 643 (1054)
Q Consensus 606 v~~~~~Gllv-----~p~d~~~la~aI~~ll~d~~~~~~~~~~ 643 (1054)
+.+ -.+| ..-.++.|+.++..++.|...++++.+.
T Consensus 315 i~~---~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~ 354 (381)
T COG0763 315 LAG---REIVPELIQEDCTPENLARALEELLLNGDRREALKEK 354 (381)
T ss_pred hcC---CccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHH
Confidence 221 1112 1235889999999999988554444433
No 191
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=96.91 E-value=0.00055 Score=75.52 Aligned_cols=64 Identities=11% Similarity=-0.014 Sum_probs=51.7
Q ss_pred EEEEEEecCCC--Chh----hHHHHHHHHHHHhccCCCCceEEEEEcCCCHH---HHHHHHHhCCCCCCCCcEEEEcC
Q 001557 770 YVFVIAADCDT--TSD----FLEIIKKVVEAAGKDNSAGFIGFVLSTALTIL---ELHSLLVSGGLSPLAFDAFICNS 838 (1054)
Q Consensus 770 kLiv~DiDGTL--~~~----i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~---~i~~~l~~l~l~~~~~d~lI~~n 838 (1054)
|+|+||+|||| ... +.+.+.++|++++++ |+.|+++|||+.. .+...++.+|++. .++-++++.
T Consensus 2 k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~----G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~-~~~~i~ts~ 74 (257)
T TIGR01458 2 KGVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGA----SVKVRFVTNTTKESKQDLLERLQRLGFDI-SEDEVFTPA 74 (257)
T ss_pred CEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHC----CCeEEEEECCCCCCHHHHHHHHHHcCCCC-CHHHeEcHH
Confidence 68999999999 233 788999999999997 9999999987555 5778888899863 456666654
No 192
>PF08550 DUF1752: Fungal protein of unknown function (DUF1752); InterPro: IPR013860 This entry represents fungal proteins of unknown function. This short section domain is bounded by two highly conserved tryptophans. The entry contains P34072 from SWISSPROT that is thought to be a negative regulator of RAS-cAMP pathway in S. cerevisiae and the S. pombe member is a GAF1 transcription factor Q10280 from SWISSPROT that is also associated with the zinc finger family GATA PF00320 from PFAM.
Probab=96.88 E-value=0.00041 Score=48.80 Aligned_cols=24 Identities=33% Similarity=0.807 Sum_probs=18.0
Q ss_pred HhhcChhhhhhhhhhhhHHHHHhh
Q 001557 63 AATRSPQERNTRLENMCWRIWNLA 86 (1054)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~ 86 (1054)
+.++..-+=..||||++||+|+.+
T Consensus 6 ~~~k~~l~~~~RLeN~sWR~w~~~ 29 (29)
T PF08550_consen 6 TKCKDSLPNGERLENLSWRLWNKN 29 (29)
T ss_pred hhhhhhcCcchhHHHHHHHHHhcC
Confidence 344445555789999999999864
No 193
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=96.88 E-value=0.005 Score=76.46 Aligned_cols=148 Identities=15% Similarity=0.128 Sum_probs=107.3
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCCCchhhhhchHHHHHHHHHHHHHc----
Q 001557 471 SNPRKPMILALARPDPKKNITT-LVKAFGECRPLRELA-----NLTLIMGNRDDIDEMSGTNAALLLSILKLIDKY---- 540 (1054)
Q Consensus 471 ~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~~~~~~-----~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~---- 540 (1054)
.+|+...++++-|+...|...+ ++..+..+.++...| ..++|.|+....... ....+...|+.+++..
T Consensus 526 ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~--~aK~iIklI~~va~~in~Dp 603 (797)
T cd04300 526 VDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYY--MAKLIIKLINAVADVVNNDP 603 (797)
T ss_pred cCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcH--HHHHHHHHHHHHHHHhccCh
Confidence 4688899999999999998887 666655554333332 355666665432221 2245677777777742
Q ss_pred CCCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC--CCCCcHHHHHHHHcCCCEEEccccCcccceee--CCceEE
Q 001557 541 DLYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV--LDNGLL 614 (1054)
Q Consensus 541 ~l~~--~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~--~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~--~~~Gll 614 (1054)
.+.+ +|.|+....-+--..++.+| ||-.+.|. .|..|..-+-+|.-|.+.|+|..|+..|+.+. ..|+++
T Consensus 604 ~v~~~lkVVFlenY~VslAe~iipaa----Dvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fi 679 (797)
T cd04300 604 DVGDKLKVVFLPNYNVSLAEKIIPAA----DLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFI 679 (797)
T ss_pred hcCCceEEEEeCCCChHHHHHhhhhh----hhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEE
Confidence 2444 68887776655555677777 99999886 79999999999999999999999999999876 789999
Q ss_pred eCCCCHHHHHH
Q 001557 615 VDPHDQQSIAD 625 (1054)
Q Consensus 615 v~p~d~~~la~ 625 (1054)
|- .+.+++.+
T Consensus 680 FG-~~~~ev~~ 689 (797)
T cd04300 680 FG-LTAEEVEA 689 (797)
T ss_pred eC-CCHHHHHH
Confidence 95 35555543
No 194
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=96.85 E-value=0.037 Score=61.32 Aligned_cols=85 Identities=15% Similarity=0.154 Sum_probs=56.2
Q ss_pred cceEEEEcCC-CchHHHHHHHccCCCCEEEEeCCCcc-chHHHHHHhCCC-Chhhhhh-HhHHHHHHHHHHhhhccCCEE
Q 001557 306 WPVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGR-DKLEQLLKQGRL-SRDEINT-TYKIMRRIEAEELSLDASEIV 381 (1054)
Q Consensus 306 ~pDVIh~h~~-~a~~~a~~l~~~~~iP~V~t~H~l~~-~~~~~l~~~g~~-~~~~i~~-~~~~~~ri~~E~~~l~~ad~V 381 (1054)
+.||+|+... .+|++++..+...|+|+++|-|++.. +....+...... ....+.. ..++++.+ -+.++++||.|
T Consensus 172 ~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l--~~~~Y~~Ad~I 249 (268)
T PF11997_consen 172 KADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESL--SRLAYRAADRI 249 (268)
T ss_pred CCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHH--HHHHHHhhCee
Confidence 4699999875 68899999999999999999999854 333344443332 0111111 11233222 35589999999
Q ss_pred EecCHHHHHHH
Q 001557 382 ITSTRQEIEEQ 392 (1054)
Q Consensus 382 i~~S~~~~~~~ 392 (1054)
++.++.....|
T Consensus 250 ~~l~~~n~~~q 260 (268)
T PF11997_consen 250 TPLYEYNREWQ 260 (268)
T ss_pred cccchhhHHHH
Confidence 99998655444
No 195
>PLN02210 UDP-glucosyl transferase
Probab=96.84 E-value=1.8 Score=51.95 Aligned_cols=136 Identities=12% Similarity=0.163 Sum_probs=75.7
Q ss_pred CCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001557 474 RKPMILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKH 551 (1054)
Q Consensus 474 ~~~~Il~vgRld~--~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~ 551 (1054)
...+.+++|.... .+-+..+..+++.. ...+.++++.....+. ...+.+... .++..+.++
T Consensus 269 ~svvyvsfGS~~~~~~~~~~e~a~~l~~~-----~~~flw~~~~~~~~~~--------~~~~~~~~~----~~~g~v~~w 331 (456)
T PLN02210 269 SSVVYISFGSMLESLENQVETIAKALKNR-----GVPFLWVIRPKEKAQN--------VQVLQEMVK----EGQGVVLEW 331 (456)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHhC-----CCCEEEEEeCCccccc--------hhhHHhhcc----CCCeEEEec
Confidence 3457788887643 23345555666544 2355455553211000 111111111 133345588
Q ss_pred CCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCccc----ceee-CCceEEeC------CCCH
Q 001557 552 HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD----IHRV-LDNGLLVD------PHDQ 620 (1054)
Q Consensus 552 ~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~e----iv~~-~~~Gllv~------p~d~ 620 (1054)
.|+. .++..++ .++||.= -|+ .+++|++++|+|+|+-...+=.- .+.+ .+.|+.++ .-+.
T Consensus 332 ~PQ~---~iL~h~~--vg~FitH---~G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~ 402 (456)
T PLN02210 332 SPQE---KILSHMA--ISCFVTH---CGW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKV 402 (456)
T ss_pred CCHH---HHhcCcC--cCeEEee---CCc-ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCH
Confidence 8876 4566651 1355522 233 47889999999999987644221 2222 45777774 2378
Q ss_pred HHHHHHHHHHHhCHH
Q 001557 621 QSIADALLKLVSDKQ 635 (1054)
Q Consensus 621 ~~la~aI~~ll~d~~ 635 (1054)
+++++++++++.+++
T Consensus 403 ~~l~~av~~~m~~~~ 417 (456)
T PLN02210 403 EEVERCIEAVTEGPA 417 (456)
T ss_pred HHHHHHHHHHhcCch
Confidence 899999999997643
No 196
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=96.81 E-value=1.9 Score=51.87 Aligned_cols=81 Identities=17% Similarity=0.178 Sum_probs=53.6
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCccc----ce-eeCCceEEeCC--
Q 001557 545 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD----IH-RVLDNGLLVDP-- 617 (1054)
Q Consensus 545 ~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~e----iv-~~~~~Gllv~p-- 617 (1054)
.+.+.+++|+.+ ++...+ .+.||. -+-..+++||+.+|+|+|+-...+=.- .+ ...+.|+.++.
T Consensus 339 g~vv~~W~PQ~~---iL~h~~--vg~Fit----H~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~ 409 (481)
T PLN02992 339 GFVVPSWAPQAE---ILAHQA--VGGFLT----HCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPK 409 (481)
T ss_pred CEEEeecCCHHH---HhCCcc--cCeeEe----cCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCC
Confidence 477788988775 444441 023442 233458899999999999988644222 22 23456777743
Q ss_pred --CCHHHHHHHHHHHHhCH
Q 001557 618 --HDQQSIADALLKLVSDK 634 (1054)
Q Consensus 618 --~d~~~la~aI~~ll~d~ 634 (1054)
-+.++++++|.+++.++
T Consensus 410 ~~~~~~~l~~av~~vm~~~ 428 (481)
T PLN02992 410 EVISRSKIEALVRKVMVEE 428 (481)
T ss_pred CcccHHHHHHHHHHHhcCC
Confidence 47889999999999763
No 197
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=96.80 E-value=0.058 Score=65.30 Aligned_cols=154 Identities=15% Similarity=0.135 Sum_probs=86.7
Q ss_pred HhhhcCCCCCcEEE-EE-eCCCC-CCCHHHHHHHHH--hcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHc
Q 001557 466 IMHFFSNPRKPMIL-AL-ARPDP-KKNITTLVKAFG--ECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKY 540 (1054)
Q Consensus 466 ~~~~~~~~~~~~Il-~v-gRld~-~Kgi~~ll~A~~--~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~ 540 (1054)
++++..++++++|. .. +|-.+ ++.++.+++|+. .+. + ++.+++...+.. ....+.+..+..
T Consensus 404 r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~---~--~l~fvvp~a~~~---------~~~~i~~~~~~~ 469 (608)
T PRK01021 404 KEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLA---S--THQLLVSSANPK---------YDHLILEVLQQE 469 (608)
T ss_pred HHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhc---c--CeEEEEecCchh---------hHHHHHHHHhhc
Confidence 34444455666653 33 34433 457788888887 553 2 355555433221 123344444433
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEc-ccc------------------C
Q 001557 541 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVAT-KNG------------------G 601 (1054)
Q Consensus 541 ~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat-~~G------------------g 601 (1054)
+.. .+.+.. ..+-.+++++| |+.+..| |.+.+|++.+|+|+|.. +.+ +
T Consensus 470 ~~~-~~~ii~---~~~~~~~m~aa----D~aLaaS-----GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIs 536 (608)
T PRK01021 470 GCL-HSHIVP---SQFRYELMREC----DCALAKC-----GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYS 536 (608)
T ss_pred CCC-CeEEec---CcchHHHHHhc----CeeeecC-----CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeee
Confidence 211 122221 11246899999 9999887 99999999999998773 222 1
Q ss_pred cccceeeCC-ceEEe---CCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 001557 602 PVDIHRVLD-NGLLV---DPHDQQSIADALLKLVSDKQLWERCRQNGLKN 647 (1054)
Q Consensus 602 ~~eiv~~~~-~Gllv---~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~ 647 (1054)
.+.|+.+.. ---++ +.-+++.+++++ +++.|++.++++.+...+.
T Consensus 537 LpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~~l~~l 585 (608)
T PRK01021 537 LPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQKDACRDL 585 (608)
T ss_pred hhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHHHHHHHH
Confidence 122221100 01122 234789999996 8888888776666555444
No 198
>PLN02764 glycosyltransferase family protein
Probab=96.80 E-value=1.9 Score=51.56 Aligned_cols=113 Identities=13% Similarity=0.099 Sum_probs=68.0
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc----cce-eeCCceEEeCC---
Q 001557 546 VAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV----DIH-RVLDNGLLVDP--- 617 (1054)
Q Consensus 546 V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~----eiv-~~~~~Gllv~p--- 617 (1054)
+...+++|+.+| ++..+ .++||.= +-..+++||+++|+|+|+-...+=. ..+ +....|+.+.+
T Consensus 319 ~v~~~W~PQ~~v---L~h~~--v~~FvtH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~ 389 (453)
T PLN02764 319 VVWGGWVQQPLI---LSHPS--VGCFVSH----CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREET 389 (453)
T ss_pred cEEeCCCCHHHH---hcCcc--cCeEEec----CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccC
Confidence 556688888754 44430 1456632 3346889999999999998864422 222 22345665532
Q ss_pred --CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHh
Q 001557 618 --HDQQSIADALLKLVSDK-QLWERCRQNGLKNIH----QFSWPEHCKSYLSRISSC 667 (1054)
Q Consensus 618 --~d~~~la~aI~~ll~d~-~~~~~~~~~~~~~v~----~fsw~~~a~~yl~~l~~~ 667 (1054)
-+.+++.+++++++.++ ++.+++++++++..+ .=|-....++|++.+.+.
T Consensus 390 ~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~~~GSS~~~l~~lv~~~~~~ 446 (453)
T PLN02764 390 GWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLASPGLLTGYVDNFIESLQDL 446 (453)
T ss_pred CccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 37899999999999865 445556666655432 223333445555555443
No 199
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=96.80 E-value=0.18 Score=55.99 Aligned_cols=166 Identities=13% Similarity=0.068 Sum_probs=106.9
Q ss_pred cEEEEEeC-CCCCCCHHHHHHHHHhcccccCCCcEEEEE--ecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEE-eCCC
Q 001557 476 PMILALAR-PDPKKNITTLVKAFGECRPLRELANLTLIM--GNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVA-YPKH 551 (1054)
Q Consensus 476 ~~Il~vgR-ld~~Kgi~~ll~A~~~l~~~~~~~~l~LIi--G~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~-~~g~ 551 (1054)
++.+-+|. -|+.-+....|+++.+.. ..++.+++ |-+ .++++|..++.+...++--.+++. +..+
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~----~~~v~ii~PlsYp-------~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~ 214 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQF----GDNVKIIVPMGYP-------ANNQAYIEEVRQAGLALFGAENFQILTEK 214 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHh----CCCeEEEEECCcC-------CCCHHHHHHHHHHHHHhcCcccEEehhhh
Confidence 44444554 678888988999987763 24555544 432 234678888888888876434544 5667
Q ss_pred CCCCcHHHHHHHhhcCCcEEEecC-CCCCCcHHHHHHHHcCCCEEEcc-ccCcccceeeCCceEEeCCCCH--HHHHHHH
Q 001557 552 HKQSDVPDIYRLAAKTKGVFINPA-FIEPFGLTLIEAAAYGLPIVATK-NGGPVDIHRVLDNGLLVDPHDQ--QSIADAL 627 (1054)
Q Consensus 552 ~~~~dl~~ly~~Aa~~~dv~v~ps-~~Egfgl~l~EAmA~G~PVIat~-~Gg~~eiv~~~~~Gllv~p~d~--~~la~aI 627 (1054)
++.+|..++++.| |+.++-- +-.|+|..++ .+..|+||+.+. +.-..++.+.+ --++++..+. ..+.++
T Consensus 215 l~f~eYl~lL~~~----Dl~~f~~~RQQgiGnl~l-Li~~G~~v~l~r~n~fwqdl~e~g-v~Vlf~~d~L~~~~v~e~- 287 (322)
T PRK02797 215 LPFDDYLALLRQC----DLGYFIFARQQGIGTLCL-LIQLGKPVVLSRDNPFWQDLTEQG-LPVLFTGDDLDEDIVREA- 287 (322)
T ss_pred CCHHHHHHHHHhC----CEEEEeechhhHHhHHHH-HHHCCCcEEEecCCchHHHHHhCC-CeEEecCCcccHHHHHHH-
Confidence 8999999999999 9998874 5688886554 678899998875 66666664432 3344443322 222211
Q ss_pred HHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhh
Q 001557 628 LKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQ 669 (1054)
Q Consensus 628 ~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l~~~~~ 669 (1054)
.+++...-++.+. |+-+...+.+.++++....
T Consensus 288 ---------~rql~~~dk~~I~-Ff~pn~~~~W~~~l~~~~g 319 (322)
T PRK02797 288 ---------QRQLASVDKNIIA-FFSPNYLQGWRNALAIAAG 319 (322)
T ss_pred ---------HHHHHhhCcceee-ecCHhHHHHHHHHHHHhhC
Confidence 1122222223333 9999999999988886543
No 200
>PLN02645 phosphoglycolate phosphatase
Probab=96.76 E-value=0.0017 Score=73.73 Aligned_cols=65 Identities=12% Similarity=0.082 Sum_probs=51.3
Q ss_pred CCEEEEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCC---HHHHHHHHHhCCCCCCCCcEEEEc
Q 001557 768 RKYVFVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALT---ILELHSLLVSGGLSPLAFDAFICN 837 (1054)
Q Consensus 768 ~kkLiv~DiDGTL--~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~---~~~i~~~l~~l~l~~~~~d~lI~~ 837 (1054)
..++|+||+|||| ...+.+...++|++++++ |+.|+++|+|+ ...+.+-++.+|++. .++-++++
T Consensus 27 ~~~~~~~D~DGtl~~~~~~~~ga~e~l~~lr~~----g~~~~~~TN~~~~~~~~~~~~l~~lGi~~-~~~~I~ts 96 (311)
T PLN02645 27 SVETFIFDCDGVIWKGDKLIEGVPETLDMLRSM----GKKLVFVTNNSTKSRAQYGKKFESLGLNV-TEEEIFSS 96 (311)
T ss_pred hCCEEEEeCcCCeEeCCccCcCHHHHHHHHHHC----CCEEEEEeCCCCCCHHHHHHHHHHCCCCC-ChhhEeeh
Confidence 3589999999999 456778889999999997 89999999998 555555567888863 45655554
No 201
>PLN00164 glucosyltransferase; Provisional
Probab=96.76 E-value=2.1 Score=51.63 Aligned_cols=93 Identities=14% Similarity=0.197 Sum_probs=56.5
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCccc-----ceeeCCceEEeCC---
Q 001557 546 VAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD-----IHRVLDNGLLVDP--- 617 (1054)
Q Consensus 546 V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~e-----iv~~~~~Gllv~p--- 617 (1054)
+.+.++.|+. .++...+ .++||.= -|+ .+++||+++|+|+|+-..-+=.- +++..+.|+.++.
T Consensus 341 ~~v~~w~PQ~---~iL~h~~--vg~fvtH---~Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~ 411 (480)
T PLN00164 341 LVWPTWAPQK---EILAHAA--VGGFVTH---CGW-NSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRK 411 (480)
T ss_pred eEEeecCCHH---HHhcCcc--cCeEEee---ccc-chHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccc
Confidence 5566788776 4555541 1344421 233 47889999999999977533211 2223356776642
Q ss_pred ----CCHHHHHHHHHHHHhCHH-HHHHHHHHHHHH
Q 001557 618 ----HDQQSIADALLKLVSDKQ-LWERCRQNGLKN 647 (1054)
Q Consensus 618 ----~d~~~la~aI~~ll~d~~-~~~~~~~~~~~~ 647 (1054)
-+.++++++|.+++.+++ +.+++++++.+.
T Consensus 412 ~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~ 446 (480)
T PLN00164 412 RDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEM 446 (480)
T ss_pred cCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 267999999999998643 244444444433
No 202
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=96.72 E-value=0.017 Score=59.23 Aligned_cols=146 Identities=16% Similarity=0.186 Sum_probs=73.9
Q ss_pred CCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcC-CCchHHHHHHHccC-C
Q 001557 252 SGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHY-ADAGDAAALLSGAL-N 329 (1054)
Q Consensus 252 ~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~-~~a~~~a~~l~~~~-~ 329 (1054)
+|+++++....+. ......+++..|-..+++- ....+++.++... .+.||||.+|. |-.++ .+.... +
T Consensus 19 ~GV~~~~y~~~~~----~~~~~~~~~~~~e~~~~rg-~av~~a~~~L~~~--Gf~PDvI~~H~GWGe~L---flkdv~P~ 88 (171)
T PF12000_consen 19 PGVRVVRYRPPRG----PTPGTHPYVRDFEAAVLRG-QAVARAARQLRAQ--GFVPDVIIAHPGWGETL---FLKDVFPD 88 (171)
T ss_pred CCcEEEEeCCCCC----CCCCCCcccccHHHHHHHH-HHHHHHHHHHHHc--CCCCCEEEEcCCcchhh---hHHHhCCC
Confidence 4888888765322 2334556666664443332 2233333333333 37799999997 43222 233333 7
Q ss_pred CCEEEEeC----CCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHH
Q 001557 330 VPMVFTGH----SLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1054)
Q Consensus 330 iP~V~t~H----~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~ 405 (1054)
+|+|..+- .-+.+.- + ...+. .......++..+=..-...+..||..++.|....+ .|+..-
T Consensus 89 a~li~Y~E~~y~~~g~d~~--F--Dpe~p-~~~~~~~~~r~rN~~~l~~l~~~D~~isPT~wQ~~----~fP~~~----- 154 (171)
T PF12000_consen 89 APLIGYFEFYYRASGADVG--F--DPEFP-PSLDDRARLRMRNAHNLLALEQADAGISPTRWQRS----QFPAEF----- 154 (171)
T ss_pred CcEEEEEEEEecCCCCcCC--C--CCCCC-CCHHHHHHHHHHhHHHHHHHHhCCcCcCCCHHHHH----hCCHHH-----
Confidence 88875432 2111100 0 00000 00111111111111234578899999999986544 343211
Q ss_pred HHHHhHhcccccCCCCCCcEEEeCCCCcCCCc
Q 001557 406 KLRARIKRGVSCHGRFMPRMVVIPPGIEFHHI 437 (1054)
Q Consensus 406 ~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f 437 (1054)
.+|+.||+-|||++.+
T Consensus 155 ----------------r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 155 ----------------RSKISVIHDGIDTDRF 170 (171)
T ss_pred ----------------HcCcEEeecccchhhc
Confidence 1289999999999865
No 203
>PLN02554 UDP-glycosyltransferase family protein
Probab=96.72 E-value=2.3 Score=51.45 Aligned_cols=83 Identities=14% Similarity=0.118 Sum_probs=51.9
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc-----cceeeCCceEEeC--
Q 001557 544 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV-----DIHRVLDNGLLVD-- 616 (1054)
Q Consensus 544 ~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~-----eiv~~~~~Gllv~-- 616 (1054)
+++.+.++.|+.+ +++..+ .++||. .-| -.+++||+.+|+|+|+-...+=. .+++..+.|+.++
T Consensus 342 ~~g~v~~W~PQ~~---iL~H~~--v~~Fvt---H~G-~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~ 412 (481)
T PLN02554 342 DIGKVIGWAPQVA---VLAKPA--IGGFVT---HCG-WNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKY 412 (481)
T ss_pred cCceEEeeCCHHH---HhCCcc--cCcccc---cCc-cchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeecc
Confidence 4555668888764 442220 145552 123 35889999999999998754321 2233335576663
Q ss_pred -----------CCCHHHHHHHHHHHHh-CHH
Q 001557 617 -----------PHDQQSIADALLKLVS-DKQ 635 (1054)
Q Consensus 617 -----------p~d~~~la~aI~~ll~-d~~ 635 (1054)
.-+.++++++|++++. ++.
T Consensus 413 ~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~ 443 (481)
T PLN02554 413 WRGDLLAGEMETVTAEEIERGIRCLMEQDSD 443 (481)
T ss_pred ccccccccccCeEcHHHHHHHHHHHhcCCHH
Confidence 1268899999999996 543
No 204
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=96.71 E-value=0.059 Score=58.41 Aligned_cols=93 Identities=29% Similarity=0.523 Sum_probs=63.5
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCC
Q 001557 473 PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHH 552 (1054)
Q Consensus 473 ~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~ 552 (1054)
+.+-+++++|.-|+ ||+. ++.+..+.+ ...|+.+|+|...+. ...+++.+.++ +++.++-.
T Consensus 157 ~~r~ilI~lGGsDp-k~lt--~kvl~~L~~--~~~nl~iV~gs~~p~----------l~~l~k~~~~~---~~i~~~~~- 217 (318)
T COG3980 157 PKRDILITLGGSDP-KNLT--LKVLAELEQ--KNVNLHIVVGSSNPT----------LKNLRKRAEKY---PNINLYID- 217 (318)
T ss_pred chheEEEEccCCCh-hhhH--HHHHHHhhc--cCeeEEEEecCCCcc----------hhHHHHHHhhC---CCeeeEec-
Confidence 34557888898777 5544 444555532 225777888865431 34455555554 56665554
Q ss_pred CCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCE
Q 001557 553 KQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPI 594 (1054)
Q Consensus 553 ~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PV 594 (1054)
.++++.|+..| |++|..+ |.++.||...|+|.
T Consensus 218 -~~dma~LMke~----d~aI~Aa-----GstlyEa~~lgvP~ 249 (318)
T COG3980 218 -TNDMAELMKEA----DLAISAA-----GSTLYEALLLGVPS 249 (318)
T ss_pred -chhHHHHHHhc----chheecc-----chHHHHHHHhcCCc
Confidence 57899999999 8988654 89999999999993
No 205
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=96.67 E-value=0.016 Score=71.15 Aligned_cols=139 Identities=15% Similarity=0.109 Sum_probs=106.3
Q ss_pred CCCCCcEEEEEeCCCCCCCHHHHHH----HHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCE
Q 001557 471 SNPRKPMILALARPDPKKNITTLVK----AFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQV 546 (1054)
Q Consensus 471 ~~~~~~~Il~vgRld~~Kgi~~ll~----A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V 546 (1054)
.+|+...++++=|+...|.....+. .+..+++ ...|.+++|.|+....... ........|+..++..+...+|
T Consensus 483 ~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~-d~~prv~~iFaGKAhP~y~--~aK~iIk~I~~~a~~in~~lkV 559 (750)
T COG0058 483 VDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKE-DWVPRVQIIFAGKAHPADY--AAKEIIKLINDVADVINNKLKV 559 (750)
T ss_pred cCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhc-CCCCceEEEEeccCCCcch--HHHHHHHHHHHHHHhhcccceE
Confidence 3577889999999999997665443 3334432 3446777676665433222 2356788888888888877788
Q ss_pred EeCCCCCCCcHHHHHHHhhcCCcEEEecCC--CCCCcHHHHHHHHcCCCEEEccccCccccee--eCCceEEeC
Q 001557 547 AYPKHHKQSDVPDIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAYGLPIVATKNGGPVDIHR--VLDNGLLVD 616 (1054)
Q Consensus 547 ~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~--~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~--~~~~Gllv~ 616 (1054)
.|+...+-+--..++.+| ||-.+.|. .|..|..-+-|+.-|.|-|+|..|+..|+.+ .+.||++|-
T Consensus 560 vFl~nYdvslA~~iipa~----Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG 629 (750)
T COG0058 560 VFLPNYDVSLAELLIPAA----DVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFG 629 (750)
T ss_pred EEeCCCChhHHHhhcccc----cccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeC
Confidence 888887655555666777 99999886 7999999999999999999999999999986 788999995
No 206
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.65 E-value=0.0026 Score=62.42 Aligned_cols=54 Identities=13% Similarity=0.012 Sum_probs=47.4
Q ss_pred EEEEEEecCCCC-----------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCC--------HHHHHHHHHhCCCC
Q 001557 770 YVFVIAADCDTT-----------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALT--------ILELHSLLVSGGLS 827 (1054)
Q Consensus 770 kLiv~DiDGTL~-----------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~--------~~~i~~~l~~l~l~ 827 (1054)
|+++||+||||. ..+.+.+.++|+.|++. |+.++|+|+++ ...+..+++.+++.
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~----g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~ 73 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEA----GYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP 73 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHC----CCEEEEEECCccccccHHHHHHHHHHHHHCCCC
Confidence 689999999994 35678889999999986 89999999999 78889999999984
No 207
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.63 E-value=0.0027 Score=62.15 Aligned_cols=52 Identities=17% Similarity=0.018 Sum_probs=43.8
Q ss_pred EEEEEEecCCC-Ch--------------hhHHHHHHHHHHHhccCCCCceEEEEEcCC-CHHHHHHHHHhCC
Q 001557 770 YVFVIAADCDT-TS--------------DFLEIIKKVVEAAGKDNSAGFIGFVLSTAL-TILELHSLLVSGG 825 (1054)
Q Consensus 770 kLiv~DiDGTL-~~--------------~i~~~~~~al~~l~~~~~~~gi~fvIaTGR-~~~~i~~~l~~l~ 825 (1054)
|+|++|+|||| +. .+-+.+.+.|+.++++ |+.++|+|++ +...+...++..+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~----g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKN----GFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHC----CeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999 22 2577999999999986 8999999999 7777778888776
No 208
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=96.63 E-value=0.014 Score=64.17 Aligned_cols=66 Identities=12% Similarity=0.084 Sum_probs=50.2
Q ss_pred CCCEEEEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEEc---CCCHHHHHHHHHh-CCCCCCCCcEEEEc
Q 001557 767 RRKYVFVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLST---ALTILELHSLLVS-GGLSPLAFDAFICN 837 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL--~~~i~~~~~~al~~l~~~~~~~gi~fvIaT---GR~~~~i~~~l~~-l~l~~~~~d~lI~~ 837 (1054)
.+++.++||+|||+ ..+.-+...++|+.|+++ |+.+++.| .|+...+..-|+. .+++ ..+|.++++
T Consensus 6 ~~y~~~l~DlDGvl~~G~~~ipga~e~l~~L~~~----g~~~iflTNn~~~s~~~~~~~L~~~~~~~-~~~~~i~TS 77 (269)
T COG0647 6 DKYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAA----GKPVIFLTNNSTRSREVVAARLSSLGGVD-VTPDDIVTS 77 (269)
T ss_pred hhcCEEEEcCcCceEeCCccCchHHHHHHHHHHc----CCeEEEEeCCCCCCHHHHHHHHHhhcCCC-CCHHHeecH
Confidence 45678999999999 577888999999999997 78777765 6677767788888 4443 345555553
No 209
>PLN02167 UDP-glycosyltransferase family protein
Probab=96.60 E-value=2.7 Score=50.75 Aligned_cols=148 Identities=15% Similarity=0.195 Sum_probs=79.6
Q ss_pred HhhhcCCC--CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcC
Q 001557 466 IMHFFSNP--RKPMILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYD 541 (1054)
Q Consensus 466 ~~~~~~~~--~~~~Il~vgRld--~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~ 541 (1054)
..+++... +..+.+++|.+. ..+.+..++.+++.+. ..+.++++...... ......+-..+.+.+
T Consensus 270 ~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~-----~~flw~~~~~~~~~--~~~~~~lp~~~~er~---- 338 (475)
T PLN02167 270 IMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVG-----CRFLWSIRTNPAEY--ASPYEPLPEGFMDRV---- 338 (475)
T ss_pred HHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCC-----CcEEEEEecCcccc--cchhhhCChHHHHHh----
Confidence 44444322 345667888764 3345677777777662 24545555321100 000000001111111
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCccc-----ceeeCCceEEeC
Q 001557 542 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD-----IHRVLDNGLLVD 616 (1054)
Q Consensus 542 l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~e-----iv~~~~~Gllv~ 616 (1054)
.++..+.+++|+.+ ++...+ .++||.= -|+ .+++||+++|+|+|+-...+=.- ++...+.|+.+.
T Consensus 339 -~~rg~v~~w~PQ~~---iL~h~~--vg~fvtH---~G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~ 408 (475)
T PLN02167 339 -MGRGLVCGWAPQVE---ILAHKA--IGGFVSH---CGW-NSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELR 408 (475)
T ss_pred -ccCeeeeccCCHHH---HhcCcc--cCeEEee---CCc-ccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEee
Confidence 23445568887764 554431 1455522 233 47889999999999987543221 133335577664
Q ss_pred C---------CCHHHHHHHHHHHHhCH
Q 001557 617 P---------HDQQSIADALLKLVSDK 634 (1054)
Q Consensus 617 p---------~d~~~la~aI~~ll~d~ 634 (1054)
. -+.++++++|.+++.++
T Consensus 409 ~~~~~~~~~~~~~~~l~~av~~~m~~~ 435 (475)
T PLN02167 409 LDYVSAYGEIVKADEIAGAVRSLMDGE 435 (475)
T ss_pred cccccccCCcccHHHHHHHHHHHhcCC
Confidence 2 26889999999999753
No 210
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=96.59 E-value=0.0039 Score=77.10 Aligned_cols=149 Identities=13% Similarity=0.103 Sum_probs=107.3
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCCCchhhhhchHHHHHHHHHHHHHcC---
Q 001557 471 SNPRKPMILALARPDPKKNITT-LVKAFGECRPLRELA-----NLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYD--- 541 (1054)
Q Consensus 471 ~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~~~~~~-----~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~--- 541 (1054)
.+|+...++++-|+...|...+ ++..+..+.++...| ..++|.|+....... ....+...|+.+++..+
T Consensus 523 ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~--~aK~iIklI~~va~~iN~Dp 600 (794)
T TIGR02093 523 VDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYH--MAKLIIKLINSVAEVVNNDP 600 (794)
T ss_pred cCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcH--HHHHHHHHHHHHHHHhccCh
Confidence 4678888999999999998777 666655554433332 345666665432221 22456777777775532
Q ss_pred -CCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC--CCCCcHHHHHHHHcCCCEEEccccCcccceee--CCceEE
Q 001557 542 -LYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV--LDNGLL 614 (1054)
Q Consensus 542 -l~~--~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~--~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~--~~~Gll 614 (1054)
+.+ +|.|+....-+--..++.+| ||-.+.|. .|..|..-+-+|.-|.+.|+|..|+..|+.++ ..|+++
T Consensus 601 ~v~~~lkVVFlenY~VslAe~iipaa----Dvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fi 676 (794)
T TIGR02093 601 AVGDKLKVVFVPNYNVSLAELIIPAA----DLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFI 676 (794)
T ss_pred hhCCceeEEEeCCCChHHHHHhhhhh----hhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEE
Confidence 344 68887776655556677777 99999886 79999999999999999999999999999876 779999
Q ss_pred eCCCCHHHHHHH
Q 001557 615 VDPHDQQSIADA 626 (1054)
Q Consensus 615 v~p~d~~~la~a 626 (1054)
|- .+.+++.+.
T Consensus 677 FG-~~~~ev~~~ 687 (794)
T TIGR02093 677 FG-LTVEEVEAL 687 (794)
T ss_pred cC-CCHHHHHHH
Confidence 95 466665543
No 211
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=96.54 E-value=0.0061 Score=54.26 Aligned_cols=72 Identities=22% Similarity=0.236 Sum_probs=46.3
Q ss_pred CCCeEEEEccCCCCCcccccccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchH--HHHHHHccC
Q 001557 251 SSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGD--AAALLSGAL 328 (1054)
Q Consensus 251 ~~g~~i~rip~g~~~~~l~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~--~a~~l~~~~ 328 (1054)
.+|++|+.+|+.+. ......|-+-.. +..+ ...+.+ .++||||+|.+.+.+ -+.+.++.+
T Consensus 13 tngLKVYYlP~~~~----~~~~t~Pt~~~~----~pl~---R~Ilir-------E~I~IVHgH~a~S~l~hE~i~hA~~m 74 (90)
T PF08288_consen 13 TNGLKVYYLPLKVF----YNQCTLPTLFGS----FPLL---RNILIR-------ERIDIVHGHQAFSTLCHEAILHARTM 74 (90)
T ss_pred CCCeEEEeecchhh----hcCcchHHHHHh----hHHH---HHHHHH-------cCeeEEEeehhhhHHHHHHHHHHHhC
Confidence 46999999998653 223333332221 1111 112222 459999999975544 467778899
Q ss_pred CCCEEEEeCCCc
Q 001557 329 NVPMVFTGHSLG 340 (1054)
Q Consensus 329 ~iP~V~t~H~l~ 340 (1054)
|+++|+|-||+.
T Consensus 75 GlktVfTDHSLf 86 (90)
T PF08288_consen 75 GLKTVFTDHSLF 86 (90)
T ss_pred CCcEEeeccccc
Confidence 999999999984
No 212
>PLN02555 limonoid glucosyltransferase
Probab=96.45 E-value=2.5 Score=50.95 Aligned_cols=94 Identities=19% Similarity=0.164 Sum_probs=58.5
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc----ccee-eCCceEEeC--
Q 001557 544 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV----DIHR-VLDNGLLVD-- 616 (1054)
Q Consensus 544 ~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~----eiv~-~~~~Gllv~-- 616 (1054)
+++.+.++.|+.+|-.. ..+ ++||.= +--.+++||+.+|+|+|+-..-+=. ..+. .-..|+.+.
T Consensus 337 ~~g~v~~W~PQ~~iL~H-~~v----~~FvtH----~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~ 407 (480)
T PLN02555 337 DKGKIVQWCPQEKVLAH-PSV----ACFVTH----CGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRG 407 (480)
T ss_pred CceEEEecCCHHHHhCC-Ccc----CeEEec----CCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCC
Confidence 46666788887653322 223 566632 2245889999999999998754311 1122 225676662
Q ss_pred -----CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 001557 617 -----PHDQQSIADALLKLVSDKQLWERCRQNGLKN 647 (1054)
Q Consensus 617 -----p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~ 647 (1054)
.-+.++++.+|++++.+++ .+++++++++.
T Consensus 408 ~~~~~~v~~~~v~~~v~~vm~~~~-g~~~r~ra~~l 442 (480)
T PLN02555 408 EAENKLITREEVAECLLEATVGEK-AAELKQNALKW 442 (480)
T ss_pred ccccCcCcHHHHHHHHHHHhcCch-HHHHHHHHHHH
Confidence 1257899999999997643 45566555544
No 213
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=96.45 E-value=0.0031 Score=70.46 Aligned_cols=68 Identities=9% Similarity=0.035 Sum_probs=50.8
Q ss_pred CCEEEEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCC---HHHHHHHHHhCCCCCCCCcEEEEcCCc
Q 001557 768 RKYVFVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALT---ILELHSLLVSGGLSPLAFDAFICNSGS 840 (1054)
Q Consensus 768 ~kkLiv~DiDGTL--~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~---~~~i~~~l~~l~l~~~~~d~lI~~nGa 840 (1054)
|.++|+||+|||| .....+.+.++|++|+++ |+.|+++|+|+ ...+...++.+|++. .++-+++++.+
T Consensus 1 ~~~~~~~D~DGtl~~~~~~~~ga~e~l~~L~~~----g~~~~~~Tnns~~~~~~~~~~l~~~G~~~-~~~~i~ts~~~ 73 (279)
T TIGR01452 1 RAQGFIFDCDGVLWLGERVVPGAPELLDRLARA----GKAALFVTNNSTKSRAEYALKFARLGFNG-LAEQLFSSALC 73 (279)
T ss_pred CccEEEEeCCCceEcCCeeCcCHHHHHHHHHHC----CCeEEEEeCCCCCCHHHHHHHHHHcCCCC-ChhhEecHHHH
Confidence 4579999999999 445566699999999986 89999999975 555556778888863 34455554333
No 214
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=96.40 E-value=0.0072 Score=64.73 Aligned_cols=43 Identities=19% Similarity=0.290 Sum_probs=39.6
Q ss_pred CHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEec
Q 001557 956 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 1001 (1054)
Q Consensus 956 sKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMg 1001 (1054)
.|...++.+++++|++++++++ +||+.+ | ++|++.+|.+|+|+
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~-iGDs~~-D-i~aa~~ag~~i~~~ 194 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVA-VGDGAN-D-LSMIKAAGLGIAFN 194 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEE-EECCHH-H-HHHHHhCCCeEEeC
Confidence 4899999999999999999988 888887 8 99999999999995
No 215
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.39 E-value=0.44 Score=52.57 Aligned_cols=136 Identities=17% Similarity=0.249 Sum_probs=78.1
Q ss_pred HHhhhcCCCCCcEEEEE------eCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHH
Q 001557 465 EIMHFFSNPRKPMILAL------ARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLID 538 (1054)
Q Consensus 465 ~~~~~~~~~~~~~Il~v------gRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~ 538 (1054)
.++++...++.++|+.= .-....+++..+.+.+.+|.+. . . |+=.++. ...+.+.
T Consensus 172 vlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~---g-i--V~ipr~~-------------~~~eife 232 (346)
T COG1817 172 VLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKY---G-I--VLIPREK-------------EQAEIFE 232 (346)
T ss_pred HHHHcCCCCCCceEEEeeccccceeeccccchhhHHHHHHHHHhC---c-E--EEecCch-------------hHHHHHh
Confidence 45556666666666541 1122366777788888887532 2 2 3333332 1223344
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcccc---CcccceeeCCceEEe
Q 001557 539 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNG---GPVDIHRVLDNGLLV 615 (1054)
Q Consensus 539 ~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~G---g~~eiv~~~~~Gllv 615 (1054)
.+. ++..+.. ..|--.|+--| ++++ .+-|.-.-||++.|+|.|++..| +..+... ..|+++
T Consensus 233 ~~~---n~i~pk~--~vD~l~Llyya----~lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~~ 296 (346)
T COG1817 233 GYR---NIIIPKK--AVDTLSLLYYA----TLVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLLY 296 (346)
T ss_pred hhc---cccCCcc--cccHHHHHhhh----heee-----cCCchHHHHHHHhCCceEEecCCccccccHHHH--hcCcee
Confidence 432 2322222 22322344444 4655 34466678999999999999966 3333322 469999
Q ss_pred CCCCHHHHHHHHHHHHhCHH
Q 001557 616 DPHDQQSIADALLKLVSDKQ 635 (1054)
Q Consensus 616 ~p~d~~~la~aI~~ll~d~~ 635 (1054)
+-.|+.++.+...+.+.++.
T Consensus 297 ~s~~~~~~~~~a~~~l~~~~ 316 (346)
T COG1817 297 HSTDEIAIVEYAVRNLKYRR 316 (346)
T ss_pred ecCCHHHHHHHHHHHhhchh
Confidence 98888877777777776554
No 216
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=96.34 E-value=0.38 Score=54.13 Aligned_cols=144 Identities=12% Similarity=0.052 Sum_probs=92.0
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEe-CCCCC
Q 001557 475 KPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAY-PKHHK 553 (1054)
Q Consensus 475 ~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~-~g~~~ 553 (1054)
+..|+---.-++.-+....++++.... ...-++.+-+|-+.. +++|..++.+...++--.+++.. ..++|
T Consensus 185 ~ltILvGNSgd~sNnHieaL~~L~~~~--~~~~kIivPLsYg~~-------n~~Yi~~V~~~~~~lF~~~~~~iL~e~mp 255 (360)
T PF07429_consen 185 KLTILVGNSGDPSNNHIEALEALKQQF--GDDVKIIVPLSYGAN-------NQAYIQQVIQAGKELFGAENFQILTEFMP 255 (360)
T ss_pred ceEEEEcCCCCCCccHHHHHHHHHHhc--CCCeEEEEECCCCCc-------hHHHHHHHHHHHHHhcCccceeEhhhhCC
Confidence 344544444778888988888887642 222233333454432 35678888888888754456654 56899
Q ss_pred CCcHHHHHHHhhcCCcEEEecCC-CCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEe--CCCCHHHHHHHHHHH
Q 001557 554 QSDVPDIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLV--DPHDQQSIADALLKL 630 (1054)
Q Consensus 554 ~~dl~~ly~~Aa~~~dv~v~ps~-~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv--~p~d~~~la~aI~~l 630 (1054)
.+|..++++.| |++++... ..++|..+ =.+.+|+||+.+.....-..+.+..--+++ +.-|...+++|=+++
T Consensus 256 f~eYl~lL~~c----Dl~if~~~RQQgiGnI~-lLl~~G~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea~rql 330 (360)
T PF07429_consen 256 FDEYLALLSRC----DLGIFNHNRQQGIGNIC-LLLQLGKKVFLSRDNPFWQDLKEQGIPVLFYGDELDEALVREAQRQL 330 (360)
T ss_pred HHHHHHHHHhC----CEEEEeechhhhHhHHH-HHHHcCCeEEEecCChHHHHHHhCCCeEEeccccCCHHHHHHHHHHH
Confidence 99999999999 99999974 67887654 468899999888755444433332222333 334455555554444
Q ss_pred Hh
Q 001557 631 VS 632 (1054)
Q Consensus 631 l~ 632 (1054)
..
T Consensus 331 ~~ 332 (360)
T PF07429_consen 331 AN 332 (360)
T ss_pred hh
Confidence 43
No 217
>PRK10671 copA copper exporting ATPase; Provisional
Probab=96.32 E-value=0.022 Score=73.41 Aligned_cols=54 Identities=11% Similarity=0.051 Sum_probs=46.6
Q ss_pred CEEEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 769 KYVFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 769 kkLiv~DiDGTL------~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
...+++..||++ ...+.+..+++|+.+++. |+.++++||.+...+..+++++|+
T Consensus 630 ~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~~----gi~v~~~Tgd~~~~a~~ia~~lgi 689 (834)
T PRK10671 630 ATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKA----GYRLVMLTGDNPTTANAIAKEAGI 689 (834)
T ss_pred CeEEEEEECCEEEEEEEccCcchhhHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCC
Confidence 367788888886 466778888999999886 899999999999999999999887
No 218
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=96.30 E-value=0.006 Score=57.10 Aligned_cols=52 Identities=15% Similarity=0.057 Sum_probs=42.9
Q ss_pred EEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEEc---CCCHHHHHHHHHhCCCC
Q 001557 772 FVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLST---ALTILELHSLLVSGGLS 827 (1054)
Q Consensus 772 iv~DiDGTL--~~~i~~~~~~al~~l~~~~~~~gi~fvIaT---GR~~~~i~~~l~~l~l~ 827 (1054)
|+||+|||| ..++.+...++|++|++. |..|++.| +|+...+...|+.+|++
T Consensus 1 ~l~D~dGvl~~g~~~ipga~e~l~~L~~~----g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGAVEALDALRER----GKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp EEEESTTTSEETTEE-TTHHHHHHHHHHT----TSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred CEEeCccEeEeCCCcCcCHHHHHHHHHHc----CCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 689999999 577889999999999997 77777775 56778888888999995
No 219
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=96.27 E-value=0.059 Score=70.71 Aligned_cols=42 Identities=10% Similarity=0.045 Sum_probs=39.4
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 781 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 781 ~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
...+.+.++++|+++++. |+.++++|||++..+..+.+++|+
T Consensus 566 ~Dplr~~v~~aI~~l~~~----Gi~v~~~TGd~~~ta~~ia~~~gi 607 (997)
T TIGR01106 566 IDPPRAAVPDAVGKCRSA----GIKVIMVTGDHPITAKAIAKGVGI 607 (997)
T ss_pred cCCChHHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 467889999999999997 999999999999999999999998
No 220
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=96.15 E-value=0.0083 Score=61.59 Aligned_cols=64 Identities=11% Similarity=0.064 Sum_probs=47.1
Q ss_pred CCEEEEEEecCCCC---h-h-----------hHHHHHHHHHHHhccCCCCceEEEEEcCCCH------------HHHHHH
Q 001557 768 RKYVFVIAADCDTT---S-D-----------FLEIIKKVVEAAGKDNSAGFIGFVLSTALTI------------LELHSL 820 (1054)
Q Consensus 768 ~kkLiv~DiDGTL~---~-~-----------i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~------------~~i~~~ 820 (1054)
.+|+++||+||||. + . +-+.+.++|+.|+++ |+.++|+|..+. ..+..+
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~ 87 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDE----GYKIVIFTNQSGIGRGKLSAESFKNKIEAF 87 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHC----CCEEEEEeCCcccccCcccHHHHHHHHHHH
Confidence 46899999999992 1 1 226789999999986 899999996443 246788
Q ss_pred HHhCCCCCCCCcEEEEcC
Q 001557 821 LVSGGLSPLAFDAFICNS 838 (1054)
Q Consensus 821 l~~l~l~~~~~d~lI~~n 838 (1054)
++.+|+. ++.+|+++
T Consensus 88 l~~~gl~---~~~ii~~~ 102 (166)
T TIGR01664 88 LEKLKVP---IQVLAATH 102 (166)
T ss_pred HHHcCCC---EEEEEecC
Confidence 9999984 35555544
No 221
>PLN02954 phosphoserine phosphatase
Probab=96.11 E-value=0.031 Score=60.02 Aligned_cols=44 Identities=11% Similarity=0.194 Sum_probs=34.6
Q ss_pred cCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEe
Q 001557 952 PVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVIL 1000 (1054)
Q Consensus 952 p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaM 1000 (1054)
+.+.+|..+++.+++++|+ +++++ +||+.+ | +.|.+.++..++.
T Consensus 151 ~~~~~K~~~i~~~~~~~~~--~~~i~-iGDs~~-D-i~aa~~~~~~~~~ 194 (224)
T PLN02954 151 SRSGGKAEAVQHIKKKHGY--KTMVM-IGDGAT-D-LEARKPGGADLFI 194 (224)
T ss_pred cCCccHHHHHHHHHHHcCC--CceEE-EeCCHH-H-HHhhhcCCCCEEE
Confidence 3456799999999999986 57877 899999 9 9998776555444
No 222
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=96.08 E-value=0.86 Score=49.07 Aligned_cols=203 Identities=14% Similarity=0.089 Sum_probs=112.7
Q ss_pred CCCCcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEE
Q 001557 302 GQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIV 381 (1054)
Q Consensus 302 ~~~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~V 381 (1054)
..+.+||++.+....+..++.++.++.+.+.|+.+.+- + .-.+.-|+|
T Consensus 66 ~p~~~Pdl~I~aGrrta~l~~~lkk~~~~~~vVqI~~P------------r--------------------lp~~~fDlv 113 (329)
T COG3660 66 KPEQRPDLIITAGRRTAPLAFYLKKKFGGIKVVQIQDP------------R--------------------LPYNHFDLV 113 (329)
T ss_pred CccCCCceEEecccchhHHHHHHHHhcCCceEEEeeCC------------C--------------------CCcccceEE
Confidence 33467999999988888888899888887766665542 0 014567999
Q ss_pred EecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCc
Q 001557 382 ITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPP 461 (1054)
Q Consensus 382 i~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1054)
|.+-++.++++-.. ...++|.-=.+....+. ....
T Consensus 114 ivp~HD~~~~~s~~----------------------------~~Nilpi~Gs~h~Vt~~-----------------~lAa 148 (329)
T COG3660 114 IVPYHDWREELSDQ----------------------------GPNILPINGSPHNVTSQ-----------------RLAA 148 (329)
T ss_pred eccchhhhhhhhcc----------------------------CCceeeccCCCCcccHH-----------------Hhhh
Confidence 99888766652111 11223321112222211 1122
Q ss_pred hhHHHhhhcCCCCCcEEEEEeCCCCCCCH-H----HHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHH
Q 001557 462 IWSEIMHFFSNPRKPMILALARPDPKKNI-T----TLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKL 536 (1054)
Q Consensus 462 ~~~~~~~~~~~~~~~~Il~vgRld~~Kgi-~----~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l 536 (1054)
..+..++++..+...+-+.||.-.+.=.. + .+..++.+..+ +....+ |+--.+-.. ..+...
T Consensus 149 ~~e~~~~~~p~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~-~~g~~~-lisfSRRTp-----------~~~~s~ 215 (329)
T COG3660 149 LREAFKHLLPLPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILE-NQGGSF-LISFSRRTP-----------DTVKSI 215 (329)
T ss_pred hHHHHHhhCCCCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHH-hCCceE-EEEeecCCc-----------HHHHHH
Confidence 23334445445677788999987655444 2 23333332221 112223 233333222 223333
Q ss_pred HHH-cCCCCCEEeCCC-CCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccC
Q 001557 537 IDK-YDLYGQVAYPKH-HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG 601 (1054)
Q Consensus 537 ~~~-~~l~~~V~~~g~-~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg 601 (1054)
+.. +.-.+.+.+.+. -...-..+++.+| |.+|.+.-.-. -+.||++.|+||-+-...+
T Consensus 216 l~~~l~s~~~i~w~~~d~g~NPY~~~La~A----dyii~TaDSin---M~sEAasTgkPv~~~~~~~ 275 (329)
T COG3660 216 LKNNLNSSPGIVWNNEDTGYNPYIDMLAAA----DYIISTADSIN---MCSEAASTGKPVFILEPPN 275 (329)
T ss_pred HHhccccCceeEeCCCCCCCCchHHHHhhc----ceEEEecchhh---hhHHHhccCCCeEEEecCC
Confidence 333 444455666554 1334577899999 99999854222 3679999999997755433
No 223
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=96.06 E-value=0.05 Score=67.51 Aligned_cols=53 Identities=17% Similarity=0.075 Sum_probs=48.7
Q ss_pred EEEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 770 YVFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 770 kLiv~DiDGTL------~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
+.++++.|+++ ...+.+..+++++++++. |+.+++.||-....+..+.+++|+
T Consensus 427 r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~----Gi~v~miTGD~~~ta~~iA~~lGI 485 (675)
T TIGR01497 427 TPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRKM----GIKTIMITGDNRLTAAAIAAEAGV 485 (675)
T ss_pred eEEEEEECCEEEEEEEecccchhHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCC
Confidence 77888888887 578999999999999997 999999999999999999999998
No 224
>PRK14986 glycogen phosphorylase; Provisional
Probab=96.04 E-value=0.022 Score=70.92 Aligned_cols=148 Identities=12% Similarity=0.114 Sum_probs=108.0
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCCCchhhhhchHHHHHHHHHHHH----Hc
Q 001557 471 SNPRKPMILALARPDPKKNITT-LVKAFGECRPLRELA-----NLTLIMGNRDDIDEMSGTNAALLLSILKLID----KY 540 (1054)
Q Consensus 471 ~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~~~~~~-----~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~----~~ 540 (1054)
.+|+...++++-|+...|...+ ++..+.++.++...| ..++|.|+....... ....+...|+.+++ ..
T Consensus 539 ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~--~aK~iIk~I~~va~~in~Dp 616 (815)
T PRK14986 539 VNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYY--MAKHIIHLINDVAKVINNDP 616 (815)
T ss_pred cCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcH--HHHHHHHHHHHHHHHhccCh
Confidence 5678889999999999998887 667665554433332 355666665432221 23457777888777 23
Q ss_pred CCCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC--CCCCcHHHHHHHHcCCCEEEccccCcccceee--CCceEE
Q 001557 541 DLYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV--LDNGLL 614 (1054)
Q Consensus 541 ~l~~--~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~--~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~--~~~Gll 614 (1054)
.+.+ +|.|+....-+--..++..| ||-.+.|. .|..|..-+-+|.-|.+.++|..|...|+.++ +.||++
T Consensus 617 ~v~~~lkVVFlenY~vslAe~lipg~----Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~ 692 (815)
T PRK14986 617 QIGDKLKVVFIPNYSVSLAQLIIPAA----DLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFI 692 (815)
T ss_pred hhcCceeEEEeCCCCHHHHHHhhhhh----hhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEE
Confidence 3444 68887776655555677777 99999886 79999999999999999999999999999876 789999
Q ss_pred eCCCCHHHHHH
Q 001557 615 VDPHDQQSIAD 625 (1054)
Q Consensus 615 v~p~d~~~la~ 625 (1054)
|- .+.+++.+
T Consensus 693 fG-~~~~ev~~ 702 (815)
T PRK14986 693 FG-NTAEEVEA 702 (815)
T ss_pred eC-CCHHHHHH
Confidence 95 45555544
No 225
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=95.68 E-value=0.06 Score=66.89 Aligned_cols=140 Identities=16% Similarity=0.168 Sum_probs=102.5
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCCCchhhhhchHHHHHHHHHHHHHcC---
Q 001557 471 SNPRKPMILALARPDPKKNITT-LVKAFGECRPLRELA-----NLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYD--- 541 (1054)
Q Consensus 471 ~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~~~~~~-----~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~--- 541 (1054)
.+|+...++++-|+...|...+ ++..+.++.+....| ..++|.|+....... ....+...|+.+++..+
T Consensus 525 ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~--~aK~iIklI~~va~~in~Dp 602 (798)
T PRK14985 525 INPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYY--LAKNIIFAINKVAEVINNDP 602 (798)
T ss_pred cCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcH--HHHHHHHHHHHHHHHhcCCh
Confidence 5678888999999999998777 666655554433333 255666665432211 22456777777775553
Q ss_pred -CCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC--CCCCcHHHHHHHHcCCCEEEccccCcccceee--CCceEE
Q 001557 542 -LYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV--LDNGLL 614 (1054)
Q Consensus 542 -l~~--~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~--~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~--~~~Gll 614 (1054)
+.+ +|.|+....-+--..++.+| ||-.+.|. .|..|..-+-+|.-|.+.|+|-.|+..|+.+. +.||++
T Consensus 603 ~v~~~lkVVFlenY~VslAe~lipaa----Dvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~ 678 (798)
T PRK14985 603 LVGDKLKVVFLPDYCVSAAELLIPAA----DISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFI 678 (798)
T ss_pred hhCCceeEEEeCCCChHHHHHHhhhh----hhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEE
Confidence 334 68888776655556677777 99999886 79999999999999999999999999999875 678999
Q ss_pred eC
Q 001557 615 VD 616 (1054)
Q Consensus 615 v~ 616 (1054)
|-
T Consensus 679 fG 680 (798)
T PRK14985 679 FG 680 (798)
T ss_pred eC
Confidence 84
No 226
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=95.68 E-value=6.9 Score=46.89 Aligned_cols=146 Identities=16% Similarity=0.165 Sum_probs=77.4
Q ss_pred CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhh-hchHHHHHHHHHHHHHcCCCCCEEeCC
Q 001557 474 RKPMILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMS-GTNAALLLSILKLIDKYDLYGQVAYPK 550 (1054)
Q Consensus 474 ~~~~Il~vgRld--~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~-~~~~~~~~~i~~l~~~~~l~~~V~~~g 550 (1054)
+.-+.+++|.+. +.+-+..+..+++.+. . .+..++......+... ..............++. .++..+.+
T Consensus 261 ~sVvyvsfGS~~~l~~~q~~ela~gL~~s~----~-~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~--~~~g~v~~ 333 (455)
T PLN02152 261 SSVIYVSFGTMVELSKKQIEELARALIEGK----R-PFLWVITDKLNREAKIEGEEETEIEKIAGFRHEL--EEVGMIVS 333 (455)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHcC----C-CeEEEEecCcccccccccccccccccchhHHHhc--cCCeEEEe
Confidence 345677788754 3456777888888773 1 4444555321100000 00000000011222222 34556668
Q ss_pred CCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCccc----ceee-CCceEEeC-----CCCH
Q 001557 551 HHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD----IHRV-LDNGLLVD-----PHDQ 620 (1054)
Q Consensus 551 ~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~e----iv~~-~~~Gllv~-----p~d~ 620 (1054)
++|+.+ ++...+ .++||.= +-..+++||+.+|+|+|+-...+=.- .+.+ -+.|+-+. .-+.
T Consensus 334 W~PQ~~---iL~h~~--vg~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~ 404 (455)
T PLN02152 334 WCSQIE---VLRHRA--VGCFVTH----CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVER 404 (455)
T ss_pred eCCHHH---HhCCcc--cceEEee----CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcCcH
Confidence 888764 555551 1344422 22458899999999999987543221 1111 12455442 2367
Q ss_pred HHHHHHHHHHHhCHH
Q 001557 621 QSIADALLKLVSDKQ 635 (1054)
Q Consensus 621 ~~la~aI~~ll~d~~ 635 (1054)
++++++|++++.++.
T Consensus 405 e~l~~av~~vm~~~~ 419 (455)
T PLN02152 405 GEIRRCLEAVMEEKS 419 (455)
T ss_pred HHHHHHHHHHHhhhH
Confidence 999999999997543
No 227
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=95.49 E-value=0.19 Score=61.86 Aligned_cols=146 Identities=12% Similarity=0.165 Sum_probs=88.5
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHH---HHHhccccc--CCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHc----
Q 001557 471 SNPRKPMILALARPDPKKNITT-LVK---AFGECRPLR--ELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKY---- 540 (1054)
Q Consensus 471 ~~~~~~~Il~vgRld~~Kgi~~-ll~---A~~~l~~~~--~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~---- 540 (1054)
.+|+...++++-|+...|...+ ++. -+.+++... ....+++|+|+....... ...++...|..+++..
T Consensus 440 ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~--~gK~iIk~I~~va~~in~Dp 517 (713)
T PF00343_consen 440 LDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDY--MGKEIIKLINNVAEVINNDP 517 (713)
T ss_dssp --TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-H--HHHHHHHHHHHHHHHHCT-T
T ss_pred CCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcH--HHHHHHHHHHHHHHHHhcCh
Confidence 4678888999999999998776 333 444444321 112455666665432221 1245666676666543
Q ss_pred CCCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC--CCCCcHHHHHHHHcCCCEEEccccCcccceee--CCceEE
Q 001557 541 DLYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV--LDNGLL 614 (1054)
Q Consensus 541 ~l~~--~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~--~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~--~~~Gll 614 (1054)
.+.+ +|.|+...+-+--..++..| ||-++.|+ .|..|..-+-+|.-|.+.++|..|...||.+. .+|.++
T Consensus 518 ~v~~~lkVvFlenYdvslA~~lipg~----DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fi 593 (713)
T PF00343_consen 518 EVGDRLKVVFLENYDVSLAEKLIPGV----DVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFI 593 (713)
T ss_dssp TTCCGEEEEEETT-SHHHHHHHGGG-----SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEE
T ss_pred hhccceeEEeecCCcHHHHHHHhhhh----hhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEE
Confidence 3444 67887776554445566666 99999986 79999999999999999999999999999753 357788
Q ss_pred eCCCCHHHH
Q 001557 615 VDPHDQQSI 623 (1054)
Q Consensus 615 v~p~d~~~l 623 (1054)
+- .+.+++
T Consensus 594 FG-~~~~ev 601 (713)
T PF00343_consen 594 FG-LTAEEV 601 (713)
T ss_dssp ES--BHHHH
T ss_pred cC-CCHHHH
Confidence 74 344443
No 228
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=95.32 E-value=0.013 Score=63.83 Aligned_cols=66 Identities=14% Similarity=0.046 Sum_probs=53.0
Q ss_pred EEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEEc---CCCHHHHHHHHHh-CCCCCCCCcEEEEcCCcEE
Q 001557 772 FVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLST---ALTILELHSLLVS-GGLSPLAFDAFICNSGSEL 842 (1054)
Q Consensus 772 iv~DiDGTL--~~~i~~~~~~al~~l~~~~~~~gi~fvIaT---GR~~~~i~~~l~~-l~l~~~~~d~lI~~nGa~I 842 (1054)
++||+|||| ...+.+.+.++|+.++++ |+.+++.| ||+...+.+.+.+ ++++ ..++-+|++..+..
T Consensus 1 ~lfD~DGvL~~~~~~~~~a~e~i~~l~~~----g~~~~~~tN~~~~~~~~~~~~l~~~~g~~-~~~~~iits~~~~~ 72 (236)
T TIGR01460 1 FLFDIDGVLWLGHKPIPGAAEALNRLRAK----GKPVVFLTNNSSRSEEDYAEKLSSLLGVD-VSPDQIITSGSVTK 72 (236)
T ss_pred CEEeCcCccCcCCccCcCHHHHHHHHHHC----CCeEEEEECCCCCCHHHHHHHHHHhcCCC-CCHHHeeeHHHHHH
Confidence 579999999 455666889999999986 78888887 9999999998888 7876 35677777755433
No 229
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=95.32 E-value=0.26 Score=64.54 Aligned_cols=43 Identities=12% Similarity=0.096 Sum_probs=39.9
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 781 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 781 ~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
...+.+.++++++++++. |+.+++.||-+...+..+.+++|+.
T Consensus 577 ~Dplr~~~~~aI~~l~~a----GI~v~miTGD~~~tA~~iA~~~GI~ 619 (941)
T TIGR01517 577 KDPLRPGVREAVQECQRA----GITVRMVTGDNIDTAKAIARNCGIL 619 (941)
T ss_pred cCCCchhHHHHHHHHHHC----CCEEEEECCCChHHHHHHHHHcCCC
Confidence 467889999999999997 9999999999999999999999983
No 230
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=95.30 E-value=0.11 Score=55.68 Aligned_cols=46 Identities=13% Similarity=0.090 Sum_probs=38.8
Q ss_pred CHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcce-EEEecCcc
Q 001557 956 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHK-TVILKGVG 1004 (1054)
Q Consensus 956 sKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~-gVaMgNa~ 1004 (1054)
.+..+++.++++++++++++++ +||+.+ | +++.+.+|. +|.+..+.
T Consensus 150 p~~~~~~~~~~~~~~~~~~~i~-igD~~~-D-i~~a~~~g~~~i~v~~g~ 196 (226)
T PRK13222 150 PDPAPLLLACEKLGLDPEEMLF-VGDSRN-D-IQAARAAGCPSVGVTYGY 196 (226)
T ss_pred cChHHHHHHHHHcCCChhheEE-ECCCHH-H-HHHHHHCCCcEEEECcCC
Confidence 3578999999999999999988 999988 9 999999997 66665443
No 231
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=95.28 E-value=0.022 Score=62.19 Aligned_cols=67 Identities=13% Similarity=0.005 Sum_probs=50.3
Q ss_pred CCCEEEEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEEcCC--CHHHHHHHHHhCCCCCCCCcEEEEc
Q 001557 767 RRKYVFVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTAL--TILELHSLLVSGGLSPLAFDAFICN 837 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL--~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR--~~~~i~~~l~~l~l~~~~~d~lI~~ 837 (1054)
.+.++++||+|||+ ...+.+.+.++|++|+++ |+.++|+|.- +...+.+.++.+|++...+|.++++
T Consensus 6 ~~~~~~~~D~dG~l~~~~~~~pga~e~L~~L~~~----G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s 76 (242)
T TIGR01459 6 NDYDVFLLDLWGVIIDGNHTYPGAVQNLNKIIAQ----GKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISS 76 (242)
T ss_pred hcCCEEEEecccccccCCccCccHHHHHHHHHHC----CCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEcc
Confidence 34578999999999 356789999999999986 8888886554 4444447899999952146655553
No 232
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=95.27 E-value=0.12 Score=65.94 Aligned_cols=55 Identities=13% Similarity=-0.063 Sum_probs=47.1
Q ss_pred CEEEEEEe---cCCC--------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 769 KYVFVIAA---DCDT--------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 769 kkLiv~Di---DGTL--------~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
.+.+++++ ++.| ...+.+.++++++++++. |+.+++.||.+...+..+.+++|+.
T Consensus 417 ~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~a----GI~v~miTGD~~~tA~~IA~~lGI~ 482 (755)
T TIGR01647 417 YRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERARHL----GVEVKMVTGDHLAIAKETARRLGLG 482 (755)
T ss_pred CEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCCC
Confidence 37777777 3333 478999999999999997 9999999999999999999999983
No 233
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=95.21 E-value=0.3 Score=63.30 Aligned_cols=43 Identities=16% Similarity=0.019 Sum_probs=39.9
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 781 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 781 ~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
...+.+.++++++++++. |+.+++.||-+...+..+.+++|+.
T Consensus 513 ~Dp~R~~~~~aI~~l~~a----GI~vvmiTGD~~~tA~aIA~~lGI~ 555 (867)
T TIGR01524 513 LDPPKESTKEAIAALFKN----GINVKVLTGDNEIVTARICQEVGID 555 (867)
T ss_pred eCCCchhHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 467899999999999997 9999999999999999999999983
No 234
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=95.18 E-value=0.03 Score=62.38 Aligned_cols=51 Identities=18% Similarity=0.109 Sum_probs=42.1
Q ss_pred ecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcce-EEEecCcc
Q 001557 951 IPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHK-TVILKGVG 1004 (1054)
Q Consensus 951 ~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~-gVaMgNa~ 1004 (1054)
++..-.+...+.++++++|++++++++ +||+.+ | ++|-+.+|. ++.+.++.
T Consensus 153 ~~~~Kp~p~~~~~~~~~~g~~~~~~l~-IGD~~~-D-i~aA~~aGi~~i~v~~G~ 204 (272)
T PRK13223 153 LPQKKPDPAALLFVMKMAGVPPSQSLF-VGDSRS-D-VLAAKAAGVQCVALSYGY 204 (272)
T ss_pred CCCCCCCcHHHHHHHHHhCCChhHEEE-ECCCHH-H-HHHHHHCCCeEEEEecCC
Confidence 455566788999999999999999998 888888 9 999999996 55665543
No 235
>PRK11590 hypothetical protein; Provisional
Probab=95.12 E-value=0.082 Score=56.46 Aligned_cols=45 Identities=13% Similarity=-0.044 Sum_probs=33.7
Q ss_pred ecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEec
Q 001557 951 IPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 1001 (1054)
Q Consensus 951 ~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMg 1001 (1054)
...|..|...|+.++ |.+.+..++ -||+-+ | ++||+.+++++++.
T Consensus 158 ~c~g~~K~~~l~~~~---~~~~~~~~a-Y~Ds~~-D-~pmL~~a~~~~~vn 202 (211)
T PRK11590 158 RCLGHEKVAQLERKI---GTPLRLYSG-YSDSKQ-D-NPLLYFCQHRWRVT 202 (211)
T ss_pred cCCChHHHHHHHHHh---CCCcceEEE-ecCCcc-c-HHHHHhCCCCEEEC
Confidence 345556666666544 667777777 788888 8 99999999999985
No 236
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=95.10 E-value=0.12 Score=63.59 Aligned_cols=54 Identities=19% Similarity=0.167 Sum_probs=48.8
Q ss_pred CEEEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCc-eEEEEEcCCCHHHHHHHHHhCCC
Q 001557 769 KYVFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGF-IGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 769 kkLiv~DiDGTL------~~~i~~~~~~al~~l~~~~~~~g-i~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
.+.++++.||++ ...+-+..+++|+.|++. | +.++|+||.+...+..+++++|+
T Consensus 364 ~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~~----g~i~v~ivTgd~~~~a~~i~~~lgi 424 (556)
T TIGR01525 364 KTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRA----GGIKLVMLTGDNRSAAEAVAAELGI 424 (556)
T ss_pred cEEEEEEECCEEEEEEEecccchHhHHHHHHHHHHc----CCCeEEEEeCCCHHHHHHHHHHhCC
Confidence 478889999987 467899999999999987 7 99999999999999999999987
No 237
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=95.09 E-value=0.21 Score=65.82 Aligned_cols=43 Identities=12% Similarity=-0.089 Sum_probs=39.7
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 781 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 781 ~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
...+.+.++++|+.+++. ||.+++.||.+...+..+.+++|+.
T Consensus 644 ~Dp~r~~v~~aI~~l~~a----GIkv~MiTGD~~~tA~~iA~~~Gi~ 686 (1053)
T TIGR01523 644 YDPPRNESAGAVEKCHQA----GINVHMLTGDFPETAKAIAQEVGII 686 (1053)
T ss_pred ecCCchhHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHcCCC
Confidence 467889999999999997 9999999999999999999999983
No 238
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=95.07 E-value=0.099 Score=69.10 Aligned_cols=43 Identities=16% Similarity=0.098 Sum_probs=39.5
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 781 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 781 ~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
...+.+.++++|+.+++. ||.++++||.+...+..+.+++|+-
T Consensus 654 ~d~lr~~~~~~I~~l~~a----gi~v~miTGD~~~TA~~iA~~~gii 696 (1054)
T TIGR01657 654 ENPLKPDTKEVIKELKRA----SIRTVMITGDNPLTAVHVARECGIV 696 (1054)
T ss_pred ecCCCccHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCCC
Confidence 366889999999999997 9999999999999999999999983
No 239
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=95.06 E-value=0.32 Score=63.12 Aligned_cols=42 Identities=14% Similarity=-0.021 Sum_probs=39.6
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 781 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 781 ~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
...+.+.++++++++++. |+.+++.||=+...+..+.+++|+
T Consensus 548 ~Dp~R~~a~~aI~~l~~a----GI~v~miTGD~~~tA~~IA~~lGI 589 (902)
T PRK10517 548 LDPPKETTAPALKALKAS----GVTVKILTGDSELVAAKVCHEVGL 589 (902)
T ss_pred hCcchhhHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCC
Confidence 477899999999999997 999999999999999999999998
No 240
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=95.04 E-value=0.097 Score=64.46 Aligned_cols=54 Identities=15% Similarity=0.103 Sum_probs=48.9
Q ss_pred CEEEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 769 KYVFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 769 kkLiv~DiDGTL------~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
...++++.||++ ...+.+..+++|++|++. |+.++++||.+...+..+++++|+
T Consensus 385 ~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~----Gi~v~ilSgd~~~~a~~ia~~lgi 444 (562)
T TIGR01511 385 STSVLVAVNGELAGVFALEDQLRPEAKEVIQALKRR----GIEPVMLTGDNRKTAKAVAKELGI 444 (562)
T ss_pred CEEEEEEECCEEEEEEEecccccHHHHHHHHHHHHc----CCeEEEEcCCCHHHHHHHHHHcCC
Confidence 477889999988 577899999999999986 899999999999999999999887
No 241
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=94.92 E-value=0.11 Score=65.92 Aligned_cols=54 Identities=13% Similarity=0.015 Sum_probs=49.1
Q ss_pred CEEEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 769 KYVFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 769 kkLiv~DiDGTL------~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
++.+++..|+++ ...+.+..+++|++|++. |+.+++.||.+...+..+.+++|+
T Consensus 548 ~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~----gi~~~llTGd~~~~a~~ia~~lgi 607 (741)
T PRK11033 548 KTVVLVLRNDDVLGLIALQDTLRADARQAISELKAL----GIKGVMLTGDNPRAAAAIAGELGI 607 (741)
T ss_pred CEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCC
Confidence 478889999987 477899999999999987 899999999999999999999987
No 242
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=94.89 E-value=0.12 Score=67.20 Aligned_cols=42 Identities=10% Similarity=-0.005 Sum_probs=38.5
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 781 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 781 ~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
...+.+.+.++|+++++. |+.+++.||.+...+..+.+++|+
T Consensus 535 ~Dplr~~v~e~I~~l~~a----GI~v~miTGD~~~tA~~ia~~~gi 576 (917)
T TIGR01116 535 LDPPRPEVADAIEKCRTA----GIRVIMITGDNKETAEAICRRIGI 576 (917)
T ss_pred eCCCchhHHHHHHHHHHC----CCEEEEecCCCHHHHHHHHHHcCC
Confidence 356788999999999986 999999999999999999999998
No 243
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=94.88 E-value=0.062 Score=54.08 Aligned_cols=50 Identities=18% Similarity=-0.001 Sum_probs=41.0
Q ss_pred EEEEEecCCCC--------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHH---HHHHHhC
Q 001557 771 VFVIAADCDTT--------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILEL---HSLLVSG 824 (1054)
Q Consensus 771 Liv~DiDGTL~--------------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i---~~~l~~l 824 (1054)
++++|||||+| ....+.+.++..+++++ |..|+..|+|+.... +.||...
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~----GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADN----GYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHC----CeEEEEECcCcHHHHHHHHHHHHHH
Confidence 48999999994 23667888999999987 999999999997654 5678777
No 244
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=94.86 E-value=0.28 Score=54.68 Aligned_cols=42 Identities=24% Similarity=0.202 Sum_probs=35.8
Q ss_pred CHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEe
Q 001557 956 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVIL 1000 (1054)
Q Consensus 956 sKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaM 1000 (1054)
.|..++.++++++|++++++++ +||+.+ | +.+-..+|..++.
T Consensus 196 ~k~~~~~~~l~~~~~~p~~~l~-IGDs~~-D-i~aA~~AG~~~I~ 237 (273)
T PRK13225 196 SKRRALSQLVAREGWQPAAVMY-VGDETR-D-VEAARQVGLIAVA 237 (273)
T ss_pred CCHHHHHHHHHHhCcChhHEEE-ECCCHH-H-HHHHHHCCCeEEE
Confidence 4678999999999999999988 899988 9 8888888876543
No 245
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=94.82 E-value=0.055 Score=58.69 Aligned_cols=36 Identities=8% Similarity=-0.003 Sum_probs=30.6
Q ss_pred HHHHHHHHhccCCCCceEEEEEcCC----CHHHHHHHHHhCCCC
Q 001557 788 IKKVVEAAGKDNSAGFIGFVLSTAL----TILELHSLLVSGGLS 827 (1054)
Q Consensus 788 ~~~al~~l~~~~~~~gi~fvIaTGR----~~~~i~~~l~~l~l~ 827 (1054)
.+++|+.++++ |+.++|+|+| .-..+..+++.+|++
T Consensus 119 a~elL~~l~~~----G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 119 ARQLIDMHQRR----GDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred HHHHHHHHHHC----CCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 77888888886 8999999999 556788888889984
No 246
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=94.78 E-value=0.41 Score=62.25 Aligned_cols=55 Identities=13% Similarity=-0.017 Sum_probs=48.1
Q ss_pred CEEEEEEecC-----CC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 769 KYVFVIAADC-----DT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 769 kkLiv~DiDG-----TL------~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
.|.++++++. ++ ...+-+.++++|+.+++. |+.+++.||-+...+..+.+++|+.
T Consensus 503 ~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~----Gi~v~miTGD~~~tA~~ia~~~Gi~ 568 (884)
T TIGR01522 503 LRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLITG----GVRIIMITGDSQETAVSIARRLGMP 568 (884)
T ss_pred CEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCCC
Confidence 3788888775 33 478899999999999986 9999999999999999999999984
No 247
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=94.71 E-value=0.071 Score=57.22 Aligned_cols=56 Identities=13% Similarity=-0.032 Sum_probs=46.0
Q ss_pred CCEEEEEEecCCC--C---------------------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHH--
Q 001557 768 RKYVFVIAADCDT--T---------------------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILE-- 816 (1054)
Q Consensus 768 ~kkLiv~DiDGTL--~---------------------------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~-- 816 (1054)
.+-++|||+|-|+ + ....+.++++++.++++ |+.|+++|||+...
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~----G~~Vf~lTGR~e~~r~ 151 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIEL----GIKIFLLSGRWEELRN 151 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHC----CCEEEEEcCCChHHHH
Confidence 4578999999997 0 33567788899999987 99999999999766
Q ss_pred -HHHHHHhCCCC
Q 001557 817 -LHSLLVSGGLS 827 (1054)
Q Consensus 817 -i~~~l~~l~l~ 827 (1054)
+.+.|.+.|++
T Consensus 152 ~T~~nL~~~G~~ 163 (229)
T TIGR01675 152 ATLDNLINAGFT 163 (229)
T ss_pred HHHHHHHHcCCC
Confidence 77888888883
No 248
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=94.70 E-value=0.066 Score=57.93 Aligned_cols=40 Identities=15% Similarity=0.101 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEE
Q 001557 957 RSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVI 999 (1054)
Q Consensus 957 Kg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVa 999 (1054)
+...+.++++++|++++++++ +||+.+ | +.+-+.+|..++
T Consensus 153 ~p~~~~~~~~~l~~~p~~~l~-IGDs~~-D-i~aA~~aG~~~i 192 (229)
T PRK13226 153 HPLPLLVAAERIGVAPTDCVY-VGDDER-D-ILAARAAGMPSV 192 (229)
T ss_pred CHHHHHHHHHHhCCChhhEEE-eCCCHH-H-HHHHHHCCCcEE
Confidence 456789999999999999998 888888 9 999999987654
No 249
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=94.70 E-value=0.41 Score=62.21 Aligned_cols=42 Identities=12% Similarity=-0.009 Sum_probs=39.6
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 781 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 781 ~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
...+.+.++++++++++. ||.+++.||=+...+..+.+++|+
T Consensus 548 ~Dp~R~~a~~aI~~l~~a----GI~v~miTGD~~~tA~aIA~~lGI 589 (903)
T PRK15122 548 LDPPKESAAPAIAALREN----GVAVKVLTGDNPIVTAKICREVGL 589 (903)
T ss_pred cCccHHHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 477899999999999997 999999999999999999999998
No 250
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=94.61 E-value=0.28 Score=61.12 Aligned_cols=53 Identities=21% Similarity=0.095 Sum_probs=48.4
Q ss_pred EEEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 770 YVFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 770 kLiv~DiDGTL------~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
+.+++..|+++ ...+.+..+++++++++. |+.+++.||=+...+..+.+++|+
T Consensus 426 ~~l~va~~~~~lG~i~l~D~~R~~~~eai~~Lr~~----GI~vvMiTGDn~~TA~aIA~elGI 484 (679)
T PRK01122 426 TPLVVAEDNRVLGVIYLKDIVKPGIKERFAELRKM----GIKTVMITGDNPLTAAAIAAEAGV 484 (679)
T ss_pred cEEEEEECCeEEEEEEEeccCchhHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 66788888887 577899999999999997 999999999999999999999998
No 251
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=94.56 E-value=0.057 Score=55.75 Aligned_cols=53 Identities=9% Similarity=-0.017 Sum_probs=45.7
Q ss_pred EEEEEEecCCC-C----------------------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCC-CHHHHHH
Q 001557 770 YVFVIAADCDT-T----------------------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTAL-TILELHS 819 (1054)
Q Consensus 770 kLiv~DiDGTL-~----------------------------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR-~~~~i~~ 819 (1054)
||+|||+|+|+ + ..+-+.+.++|+.|+++ |+.++|+|+. +...+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~----G~~l~I~Sn~~~~~~~~~ 78 (174)
T TIGR01685 3 RVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDA----GTYLATASWNDVPEWAYE 78 (174)
T ss_pred cEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHC----CCEEEEEeCCCChHHHHH
Confidence 89999999999 0 23557889999999986 9999999988 8888889
Q ss_pred HHHhCCC
Q 001557 820 LLVSGGL 826 (1054)
Q Consensus 820 ~l~~l~l 826 (1054)
+++.+++
T Consensus 79 ~L~~~~l 85 (174)
T TIGR01685 79 ILGTFEI 85 (174)
T ss_pred HHHhCCc
Confidence 9999887
No 252
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=94.11 E-value=1.8 Score=49.78 Aligned_cols=80 Identities=14% Similarity=0.059 Sum_probs=49.8
Q ss_pred CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhc
Q 001557 487 KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 566 (1054)
Q Consensus 487 ~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~ 566 (1054)
.+.++.+++|+.++.+. . +.+++....+. +.+.....+. ..+.+.+ +..++|+.|
T Consensus 182 ~~llP~~~~aa~~L~~~--~--~~~~i~~a~~~-----------~~i~~~~~~~---~~~~~~~-----~~~~~m~~a-- 236 (347)
T PRK14089 182 KRLMPIFKELAKKLEGK--E--KILVVPSFFKG-----------KDLKEIYGDI---SEFEISY-----DTHKALLEA-- 236 (347)
T ss_pred HHHHHHHHHHHHHHhhc--C--cEEEEeCCCcH-----------HHHHHHHhcC---CCcEEec-----cHHHHHHhh--
Confidence 35567777888888532 1 34443332221 2233333322 1333332 557899999
Q ss_pred CCcEEEecCCCCCCcHHHHHHHHcCCCEEEcc
Q 001557 567 TKGVFINPAFIEPFGLTLIEAAAYGLPIVATK 598 (1054)
Q Consensus 567 ~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~ 598 (1054)
|++|..| |.+.+|++.+|+|.|..-
T Consensus 237 --Dlal~~S-----GT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 237 --EFAFICS-----GTATLEAALIGTPFVLAY 261 (347)
T ss_pred --hHHHhcC-----cHHHHHHHHhCCCEEEEE
Confidence 9999776 888889999999988743
No 253
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=94.03 E-value=0.069 Score=53.51 Aligned_cols=53 Identities=11% Similarity=-0.038 Sum_probs=42.0
Q ss_pred EEEEEEecCCCC-h------------hhHHHHHHHHHHHhccCCCCceEEEEEcCCC---------------HHHHHHHH
Q 001557 770 YVFVIAADCDTT-S------------DFLEIIKKVVEAAGKDNSAGFIGFVLSTALT---------------ILELHSLL 821 (1054)
Q Consensus 770 kLiv~DiDGTL~-~------------~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~---------------~~~i~~~l 821 (1054)
++++||+||||+ . .+-+.+.++|+.|+++ |+.++|+|..+ ...+...+
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~----g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l 76 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAA----GYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELL 76 (147)
T ss_pred CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHC----CCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHH
Confidence 468999999993 1 2367889999999986 89999999865 25667778
Q ss_pred HhCCC
Q 001557 822 VSGGL 826 (1054)
Q Consensus 822 ~~l~l 826 (1054)
+.+++
T Consensus 77 ~~~~l 81 (147)
T TIGR01656 77 RQLGV 81 (147)
T ss_pred HhCCC
Confidence 88887
No 254
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=93.88 E-value=4.1 Score=44.19 Aligned_cols=83 Identities=19% Similarity=0.274 Sum_probs=57.4
Q ss_pred EecCCCCHHHHHHHHHHHh---CCCccCEEEEeCcCCCccccccccCcceEEEecCcchhHHhhhhccCCCcccccccC-
Q 001557 950 VIPVLASRSQALRYLHVRW---GIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFD- 1025 (1054)
Q Consensus 950 V~p~~asKg~AL~~L~~~~---gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMgNa~~~~~~~~~~~~~~~~d~~~~~- 1025 (1054)
--|.+.-||..|+.+.... |++-++++. +||+.| ||-.+++--..-++|.-- +|++.+.+...
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviY-iGDG~n-D~Cp~~~L~~~D~v~~R~-----------~~~l~~~i~~~~ 210 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIY-IGDGRN-DFCPALRLRPRDVVFPRK-----------GYPLHKLIQKNP 210 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEE-ECCCCC-CcCcccccCCCCEEecCC-----------CChHHHHHhcCC
Confidence 4477788999999998874 777777877 999999 988998877777888633 35555555432
Q ss_pred ---CCceEEeccccCHHHHHHHHHHh
Q 001557 1026 ---SHNVIQVDEACDSYDIRASLEKL 1048 (1054)
Q Consensus 1026 ---~~~~~~~t~~~~~~gI~~al~~~ 1048 (1054)
+..+..= .+..+|.+-|+++
T Consensus 211 ~~~~a~v~~W---~~g~~i~~~l~~~ 233 (234)
T PF06888_consen 211 GEVKAEVVPW---SSGEEILEILLQL 233 (234)
T ss_pred CcceeEEEec---CCHHHHHHHHHhh
Confidence 2222222 3466777777654
No 255
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=93.85 E-value=0.1 Score=62.97 Aligned_cols=66 Identities=12% Similarity=0.135 Sum_probs=51.1
Q ss_pred cCCCEEEEEEecCCCC--h-------------hhHHHHHHHHHHHhccCCCCceEEEEEcCCCH------------HHHH
Q 001557 766 RRRKYVFVIAADCDTT--S-------------DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTI------------LELH 818 (1054)
Q Consensus 766 ~~~kkLiv~DiDGTL~--~-------------~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~------------~~i~ 818 (1054)
..+.|+++||+||||. + -+-+.+.++|+.|.++ |+.++|+|--+- ..+.
T Consensus 165 ~~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~----Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~ 240 (526)
T TIGR01663 165 KGQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEAD----GFKICIFTNQGGIARGKINADDFKAKIE 240 (526)
T ss_pred CccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHC----CCEEEEEECCcccccCcccHHHHHHHHH
Confidence 3556999999999992 1 1357788999999987 899999987544 3477
Q ss_pred HHHHhCCCCCCCCcEEEEcC
Q 001557 819 SLLVSGGLSPLAFDAFICNS 838 (1054)
Q Consensus 819 ~~l~~l~l~~~~~d~lI~~n 838 (1054)
.+++.+|++ ++.++|..
T Consensus 241 ~iL~~lgip---fdviia~~ 257 (526)
T TIGR01663 241 AIVAKLGVP---FQVFIAIG 257 (526)
T ss_pred HHHHHcCCc---eEEEEeCC
Confidence 889999984 67777754
No 256
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=93.76 E-value=0.14 Score=54.15 Aligned_cols=40 Identities=20% Similarity=0.337 Sum_probs=29.0
Q ss_pred CCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEec
Q 001557 955 ASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 1001 (1054)
Q Consensus 955 asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMg 1001 (1054)
..|..+++ .++...+++++ +||+.+ | +.|.+.+|.||+.+
T Consensus 131 ~~k~~~l~----~~~~~~~~~v~-iGDs~~-D-~~~~~aa~~~v~~~ 170 (205)
T PRK13582 131 DGKRQAVK----ALKSLGYRVIA-AGDSYN-D-TTMLGEADAGILFR 170 (205)
T ss_pred chHHHHHH----HHHHhCCeEEE-EeCCHH-H-HHHHHhCCCCEEEC
Confidence 34544544 44444567777 899988 9 99999999998764
No 257
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=93.58 E-value=0.17 Score=55.83 Aligned_cols=66 Identities=11% Similarity=0.061 Sum_probs=49.0
Q ss_pred CCEEEEEEecCCC-C----------------------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCH---H
Q 001557 768 RKYVFVIAADCDT-T----------------------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTI---L 815 (1054)
Q Consensus 768 ~kkLiv~DiDGTL-~----------------------------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~---~ 815 (1054)
++..|++|||+|+ + ..+-+.+.++|+.+++. |+.++|+|+|+. .
T Consensus 74 kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~----G~~v~iVTnR~~~~~~ 149 (266)
T TIGR01533 74 KKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSK----GVKIFYVSNRSEKEKA 149 (266)
T ss_pred CCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHC----CCeEEEEeCCCcchHH
Confidence 3579999999999 1 22446778899999886 899999999984 4
Q ss_pred HHHHHHHhCCCCCCCCcEEEEc
Q 001557 816 ELHSLLVSGGLSPLAFDAFICN 837 (1054)
Q Consensus 816 ~i~~~l~~l~l~~~~~d~lI~~ 837 (1054)
.+...|+.+|++...++.++..
T Consensus 150 ~T~~~Lkk~Gi~~~~~d~lllr 171 (266)
T TIGR01533 150 ATLKNLKRFGFPQADEEHLLLK 171 (266)
T ss_pred HHHHHHHHcCcCCCCcceEEeC
Confidence 4558888999853234556554
No 258
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=93.55 E-value=0.11 Score=52.96 Aligned_cols=60 Identities=18% Similarity=0.207 Sum_probs=45.0
Q ss_pred CEEEEEEecCCCChh--------------hHHHHHHHHHHHhccCCCCceEEEEEcCC---------------CHHHHHH
Q 001557 769 KYVFVIAADCDTTSD--------------FLEIIKKVVEAAGKDNSAGFIGFVLSTAL---------------TILELHS 819 (1054)
Q Consensus 769 kkLiv~DiDGTL~~~--------------i~~~~~~al~~l~~~~~~~gi~fvIaTGR---------------~~~~i~~ 819 (1054)
+|+++||.||||... +-+.+.++|+.|+++ |+.++|+|-- +...+..
T Consensus 1 ~~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~----g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~ 76 (161)
T TIGR01261 1 QKILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKA----GYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQ 76 (161)
T ss_pred CCEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHC----CCeEEEEeCCccccCCcCCHHHHHHHHHHHHH
Confidence 378999999999321 336688999999986 8888888864 3456778
Q ss_pred HHHhCCCCCCCCcEEE
Q 001557 820 LLVSGGLSPLAFDAFI 835 (1054)
Q Consensus 820 ~l~~l~l~~~~~d~lI 835 (1054)
+++.+|+. ||.++
T Consensus 77 ~l~~~gl~---fd~ii 89 (161)
T TIGR01261 77 IFRSQGII---FDDVL 89 (161)
T ss_pred HHHHCCCc---eeEEE
Confidence 89999983 55443
No 259
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=93.46 E-value=0.41 Score=51.34 Aligned_cols=45 Identities=9% Similarity=0.014 Sum_probs=37.7
Q ss_pred CCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEec
Q 001557 954 LASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 1001 (1054)
Q Consensus 954 ~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMg 1001 (1054)
+=.+...++.+++++|++++++++ +||+.+ | +++-+.+|..++.-
T Consensus 147 ~Kp~~~~~~~~~~~~~~~~~~~~~-igDs~~-D-i~aA~~aG~~~i~v 191 (222)
T PRK10826 147 SKPHPEVYLNCAAKLGVDPLTCVA-LEDSFN-G-MIAAKAARMRSIVV 191 (222)
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEE-EcCChh-h-HHHHHHcCCEEEEe
Confidence 334567999999999999999998 999998 9 99999999765553
No 260
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=93.38 E-value=0.27 Score=50.41 Aligned_cols=36 Identities=11% Similarity=0.257 Sum_probs=29.1
Q ss_pred CCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCc
Q 001557 954 LASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGV 994 (1054)
Q Consensus 954 ~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~a 994 (1054)
+-.|+.+|+.|++ |.+.+.++. +||+.| | ++|..-+
T Consensus 157 sggKa~~i~~lrk--~~~~~~~~m-vGDGat-D-lea~~pa 192 (227)
T KOG1615|consen 157 SGGKAEVIALLRK--NYNYKTIVM-VGDGAT-D-LEAMPPA 192 (227)
T ss_pred CCccHHHHHHHHh--CCChheeEE-ecCCcc-c-cccCCch
Confidence 3379999999999 777777777 999999 9 8877653
No 261
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=93.33 E-value=0.55 Score=58.53 Aligned_cols=53 Identities=13% Similarity=0.075 Sum_probs=46.1
Q ss_pred EEEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 770 YVFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 770 kLiv~DiDGTL------~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
+.+++..|+++ ...+.+..+++++++++. |+.+++.||-+...+..+.+++|+
T Consensus 422 ~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~----GI~vvMiTGDn~~TA~aIA~elGI 480 (673)
T PRK14010 422 TPLVVLEDNEILGVIYLKDVIKDGLVERFRELREM----GIETVMCTGDNELTAATIAKEAGV 480 (673)
T ss_pred eEEEEEECCEEEEEEEeecCCcHHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 44555567776 477899999999999997 999999999999999999999998
No 262
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=93.32 E-value=1.6 Score=44.23 Aligned_cols=101 Identities=17% Similarity=0.127 Sum_probs=55.8
Q ss_pred cceEEEEcCC-CchHHHHHHHccCCCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEec
Q 001557 306 WPVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 384 (1054)
Q Consensus 306 ~pDVIh~h~~-~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~ 384 (1054)
.+|+|.+.+. +...+..+.....++|.++.+|.-...+-. ..+. ..++ .|.+..- ...-.||.|+..
T Consensus 59 ~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQl~YP~---~~~~--~rd~--~~~~~ni-----~saLaAD~v~FN 126 (168)
T PF12038_consen 59 SYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQLAYPV---SPGQ--ERDF--QYGMNNI-----YSALAADRVVFN 126 (168)
T ss_pred CCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCcccCCC---CCCc--cccc--cHHHHHH-----HHHHhceeeeec
Confidence 4799999875 434443444455689999999974222100 0010 0111 2222222 245689999999
Q ss_pred CHHHHHHHHh-------hhcCCC-hHHHHHHHHhHhcccccCCCCCCcEEEeCCCC
Q 001557 385 TRQEIEEQWR-------LYDGFD-PVLERKLRARIKRGVSCHGRFMPRMVVIPPGI 432 (1054)
Q Consensus 385 S~~~~~~~~~-------~y~~~~-~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGI 432 (1054)
|....+.+.. .++.+. ..+.+.|++ |..|+|.||
T Consensus 127 S~~nr~sFL~~~~~fL~~~PD~~p~~~~~~I~~--------------Ks~VL~~pi 168 (168)
T PF12038_consen 127 SAFNRDSFLDGIPSFLKRMPDHRPKGLVERIRA--------------KSQVLPVPI 168 (168)
T ss_pred chhhHHHHHHHHHHHHHHCCCCCchhHHHHHhc--------------cCeecCCCC
Confidence 9876655433 233332 333344433 788999886
No 263
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=93.30 E-value=0.79 Score=53.29 Aligned_cols=109 Identities=12% Similarity=0.189 Sum_probs=64.2
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEc--cc-------cCcccceeeCCce
Q 001557 542 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVAT--KN-------GGPVDIHRVLDNG 612 (1054)
Q Consensus 542 l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat--~~-------Gg~~eiv~~~~~G 612 (1054)
..++|.+... ..++.+++..| |++| --++-++.|++.++.|||-- +. |...++ .....|
T Consensus 250 ~~~~i~~~~~--~~~~~~ll~~a----DiLI-----TDySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~-~~~~pg 317 (369)
T PF04464_consen 250 DNSNIIFVSD--NEDIYDLLAAA----DILI-----TDYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDY-EEDLPG 317 (369)
T ss_dssp -TTTEEE-TT---S-HHHHHHT-----SEEE-----ESS-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-T-TTSSSS
T ss_pred cCCcEEECCC--CCCHHHHHHhc----CEEE-----EechhHHHHHHHhCCCEEEEeccHHHHhhccCCCCch-HhhCCC
Confidence 3466776654 34899999999 9977 35678999999999999953 22 333332 122346
Q ss_pred EEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 001557 613 LLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRI 664 (1054)
Q Consensus 613 llv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l 664 (1054)
-.+. +.+++.++|..++.++....+.++...+..-.|.=...+++..+.+
T Consensus 318 ~~~~--~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Dg~s~eri~~~I 367 (369)
T PF04464_consen 318 PIVY--NFEELIEAIENIIENPDEYKEKREKFRDKFFKYNDGNSSERIVNYI 367 (369)
T ss_dssp -EES--SHHHHHHHHTTHHHHHHHTHHHHHHHHHHHSTT--S-HHHHHHHHH
T ss_pred ceeC--CHHHHHHHHHhhhhCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHH
Confidence 6665 8999999999999877655544444444443344445566655544
No 264
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=93.24 E-value=0.13 Score=53.52 Aligned_cols=41 Identities=7% Similarity=-0.106 Sum_probs=33.7
Q ss_pred CEEEEEEecCCCC------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCC
Q 001557 769 KYVFVIAADCDTT------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALT 813 (1054)
Q Consensus 769 kkLiv~DiDGTL~------------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~ 813 (1054)
.|+++||.||||. -.+.+.+.++|++|+++ |+.++|+|..+
T Consensus 3 ~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----g~~l~I~Tn~~ 55 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQA----GYRVVVATNQS 55 (181)
T ss_pred ccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHC----CCEEEEEeCCc
Confidence 4999999999991 23456778999999986 89999999875
No 265
>PLN02534 UDP-glycosyltransferase
Probab=93.23 E-value=25 Score=42.62 Aligned_cols=93 Identities=22% Similarity=0.153 Sum_probs=54.2
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCccc-----ceeeCCceEEeC---
Q 001557 545 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD-----IHRVLDNGLLVD--- 616 (1054)
Q Consensus 545 ~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~e-----iv~~~~~Gllv~--- 616 (1054)
.+.+.+++|+.+ ++...+ .++||. -+-..+++||+++|+|+|+-...+-.- +++.-..|+-+.
T Consensus 345 g~~v~~w~pq~~---iL~h~~--v~~fvt----H~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~ 415 (491)
T PLN02534 345 GLLIKGWAPQVL---ILSHPA--IGGFLT----HCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEV 415 (491)
T ss_pred CeeccCCCCHHH---HhcCCc--cceEEe----cCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccc
Confidence 466778988854 555551 123552 233468899999999999987543211 111122344331
Q ss_pred ------------CCCHHHHHHHHHHHHhC-HHHHHHHHHHHHH
Q 001557 617 ------------PHDQQSIADALLKLVSD-KQLWERCRQNGLK 646 (1054)
Q Consensus 617 ------------p~d~~~la~aI~~ll~d-~~~~~~~~~~~~~ 646 (1054)
--+.++++.++++++.+ .++-+++++++.+
T Consensus 416 ~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~e 458 (491)
T PLN02534 416 PVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQE 458 (491)
T ss_pred cccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHH
Confidence 12678999999999962 2223344444443
No 266
>PLN03015 UDP-glucosyl transferase
Probab=93.16 E-value=25 Score=42.36 Aligned_cols=92 Identities=14% Similarity=0.157 Sum_probs=54.1
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc----cce-eeCCceEEeC----
Q 001557 546 VAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV----DIH-RVLDNGLLVD---- 616 (1054)
Q Consensus 546 V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~----eiv-~~~~~Gllv~---- 616 (1054)
+.+.++.|+.+|.. ..+ .+.||.= +--.+.+||+.+|+|+|+-...+=. ..+ +....|+-+.
T Consensus 337 l~v~~W~PQ~~vL~---h~~--vg~fvtH----~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~ 407 (470)
T PLN03015 337 LVVTQWAPQVEILS---HRS--IGGFLSH----CGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPS 407 (470)
T ss_pred eEEEecCCHHHHhc---cCc--cCeEEec----CCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEeccccc
Confidence 45668888876544 331 1455522 2235888999999999998753321 111 2234565553
Q ss_pred --CCCHHHHHHHHHHHHhC-HHHHHHHHHHHHH
Q 001557 617 --PHDQQSIADALLKLVSD-KQLWERCRQNGLK 646 (1054)
Q Consensus 617 --p~d~~~la~aI~~ll~d-~~~~~~~~~~~~~ 646 (1054)
.-..++++.+|++++.. .++-+++++++.+
T Consensus 408 ~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~ 440 (470)
T PLN03015 408 EKVIGREEVASLVRKIVAEEDEEGQKIRAKAEE 440 (470)
T ss_pred CCccCHHHHHHHHHHHHccCcccHHHHHHHHHH
Confidence 23678999999999952 1223344444443
No 267
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=93.10 E-value=0.43 Score=58.49 Aligned_cols=53 Identities=11% Similarity=-0.036 Sum_probs=46.9
Q ss_pred EEEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCce-EEEEEcCCCHHHHHHHHHhCCC
Q 001557 770 YVFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFI-GFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 770 kLiv~DiDGTL------~~~i~~~~~~al~~l~~~~~~~gi-~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
..+++..|+++ ...+.+..+++|+.|++. |+ .++++||.+...+..+++++|+
T Consensus 343 ~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~----Gi~~v~vvTgd~~~~a~~i~~~lgi 402 (536)
T TIGR01512 343 TIVHVARDGTYLGYILLSDEPRPDAAEAIAELKAL----GIEKVVMLTGDRRAVAERVARELGI 402 (536)
T ss_pred eEEEEEECCEEEEEEEEeccchHHHHHHHHHHHHc----CCCcEEEEcCCCHHHHHHHHHHcCC
Confidence 56777788877 467889999999999987 89 9999999999999999999987
No 268
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=93.00 E-value=0.18 Score=50.63 Aligned_cols=54 Identities=15% Similarity=0.078 Sum_probs=45.2
Q ss_pred CCEEEEEEecCCC--C----------h-----------------hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHH
Q 001557 768 RKYVFVIAADCDT--T----------S-----------------DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELH 818 (1054)
Q Consensus 768 ~kkLiv~DiDGTL--~----------~-----------------~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~ 818 (1054)
||+++++|+|+|| . . .+-+.+.+.|+.|+ + ++.++|+|.-+...+.
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~----~~~l~I~Ts~~~~~~~ 75 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-E----LFELVVFTAGLRMYAD 75 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHH-h----ccEEEEEeCCcHHHHH
Confidence 5789999999999 1 0 23567888999997 3 6899999999999999
Q ss_pred HHHHhCCC
Q 001557 819 SLLVSGGL 826 (1054)
Q Consensus 819 ~~l~~l~l 826 (1054)
.+++.+++
T Consensus 76 ~il~~l~~ 83 (148)
T smart00577 76 PVLDLLDP 83 (148)
T ss_pred HHHHHhCc
Confidence 99999877
No 269
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=92.87 E-value=3 Score=47.30 Aligned_cols=195 Identities=16% Similarity=0.121 Sum_probs=110.8
Q ss_pred CCcceEEEEcCCCchHHHHHHHccCCC--CEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCCEE
Q 001557 304 PIWPVAIHGHYADAGDAAALLSGALNV--PMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIV 381 (1054)
Q Consensus 304 ~~~pDVIh~h~~~a~~~a~~l~~~~~i--P~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~V 381 (1054)
+-+||+|.+....+..++..+++..|- +.|+..+--. ..+..|+|
T Consensus 55 ~~~pdLiIsaGr~t~~~~~~l~r~~gg~~~~V~i~~P~~---------------------------------~~~~FDlv 101 (311)
T PF06258_consen 55 PPWPDLIISAGRRTAPAALALRRASGGRTKTVQIMDPRL---------------------------------PPRPFDLV 101 (311)
T ss_pred CCCCcEEEECCCchHHHHHHHHHHcCCCceEEEEcCCCC---------------------------------CccccCEE
Confidence 357999999998888888888887766 5666555210 14578999
Q ss_pred EecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEE---EeCCCCcCCCcccCCCCCCCcccccCCCCCCC
Q 001557 382 ITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMV---VIPPGIEFHHIVRHNGDVDGEVERDEGSPASP 458 (1054)
Q Consensus 382 i~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~---vIPnGID~~~f~~~~~~~~~~~~~~~~~~~~~ 458 (1054)
|+..++... .+ +++. ..||.|+.+......
T Consensus 102 i~p~HD~~~------~~------------------------~Nvl~t~ga~~~i~~~~l~~a~----------------- 134 (311)
T PF06258_consen 102 IVPEHDRLP------RG------------------------PNVLPTLGAPNRITPERLAEAA----------------- 134 (311)
T ss_pred EECcccCcC------CC------------------------CceEecccCCCcCCHHHHHHHH-----------------
Confidence 998764210 00 1332 233444433322100
Q ss_pred CCchhHHHhhhcCCCCCcEEEEEeCCCCCC--CHH---HHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHH
Q 001557 459 DPPIWSEIMHFFSNPRKPMILALARPDPKK--NIT---TLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSI 533 (1054)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~Il~vgRld~~K--gi~---~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i 533 (1054)
.+...++...+...+.+.||.....- +-+ .+++.+..+.+... ..+ +|...+-.. .+....+
T Consensus 135 ----~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~~-~vttSRRTp-------~~~~~~L 201 (311)
T PF06258_consen 135 ----AAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GSL-LVTTSRRTP-------PEAEAAL 201 (311)
T ss_pred ----HhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-CeE-EEEcCCCCc-------HHHHHHH
Confidence 00012233334555667888755332 223 45555555533222 233 344444321 2334444
Q ss_pred HHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccC
Q 001557 534 LKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG 601 (1054)
Q Consensus 534 ~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg 601 (1054)
.+..+ -.+.+.+...-+.+=+..+|..| |.++++.- . =.-+.||+++|+||..-...+
T Consensus 202 ~~~~~---~~~~~~~~~~~~~nPy~~~La~a----d~i~VT~D--S-vSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 202 RELLK---DNPGVYIWDGTGENPYLGFLAAA----DAIVVTED--S-VSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred HHhhc---CCCceEEecCCCCCcHHHHHHhC----CEEEEcCc--c-HHHHHHHHHcCCCEEEecCCC
Confidence 44443 33566555665666799999999 99999943 2 223679999999998877655
No 270
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=92.87 E-value=0.21 Score=56.98 Aligned_cols=63 Identities=13% Similarity=0.044 Sum_probs=50.4
Q ss_pred CEEEEEEecCCC------Ch--------hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHh----CCCCCCC
Q 001557 769 KYVFVIAADCDT------TS--------DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVS----GGLSPLA 830 (1054)
Q Consensus 769 kkLiv~DiDGTL------~~--------~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~----l~l~~~~ 830 (1054)
+|+|++|+|+|| +. ..-+.+.++|+.|++. |+.++|||..+...+...++. +++. ..
T Consensus 3 ~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~----Gi~lai~S~n~~~~a~~~l~~~~~~~~~~-~~ 77 (320)
T TIGR01686 3 LKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQ----GFLLALASKNDEDDAKKVFERRKDFILQA-ED 77 (320)
T ss_pred eEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhC----CCEEEEEcCCCHHHHHHHHHhCccccCcH-HH
Confidence 599999999999 11 2457899999999986 999999999999999999998 7763 22
Q ss_pred CcEEEE
Q 001557 831 FDAFIC 836 (1054)
Q Consensus 831 ~d~lI~ 836 (1054)
|+.+++
T Consensus 78 f~~~~~ 83 (320)
T TIGR01686 78 FDARSI 83 (320)
T ss_pred eeEEEE
Confidence 444433
No 271
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=92.81 E-value=0.12 Score=58.24 Aligned_cols=56 Identities=4% Similarity=-0.125 Sum_probs=48.3
Q ss_pred CCCEEEEEEecCCCC---------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 767 RRKYVFVIAADCDTT---------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL~---------------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
.+.+++++|+|||+. ..+.+.+.++|+.|++. |+.++|+|||+.......++.+++
T Consensus 156 ~~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----g~~i~i~T~r~~~~~~~~l~~l~~ 226 (300)
T PHA02530 156 GLPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAA----GYEIIVVSGRDGVCEEDTVEWLRQ 226 (300)
T ss_pred CCCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhC----CCEEEEEeCCChhhHHHHHHHHHH
Confidence 345899999999992 24678999999999986 899999999999999999988877
No 272
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=92.80 E-value=0.18 Score=52.01 Aligned_cols=54 Identities=7% Similarity=0.018 Sum_probs=45.1
Q ss_pred CEEEEEEecCCCC----hhhHHHHHHHHHHHhccCCCCceEEEEEcCCC-HHHHHHHHHhCCC
Q 001557 769 KYVFVIAADCDTT----SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALT-ILELHSLLVSGGL 826 (1054)
Q Consensus 769 kkLiv~DiDGTL~----~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~-~~~i~~~l~~l~l 826 (1054)
-+++++|+|||++ ..+.+.+.++|+.|++. |+.++|+|+.+ ...+..+++.+++
T Consensus 25 v~~vv~D~Dgtl~~~~~~~~~pgv~e~L~~Lk~~----g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 25 IKGVVLDKDNTLVYPDHNEAYPALRDWIEELKAA----GRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CCEEEEecCCccccCCCCCcChhHHHHHHHHHHc----CCEEEEEeCCchHHHHHHHHHHcCC
Confidence 4899999999993 35778899999999986 89999999988 5666677777776
No 273
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=92.68 E-value=0.16 Score=52.51 Aligned_cols=40 Identities=15% Similarity=0.163 Sum_probs=32.8
Q ss_pred EEEEEEecCCCCh-----------hhHHHHHHHHHHHhccCCCCceEEEEEcCCC
Q 001557 770 YVFVIAADCDTTS-----------DFLEIIKKVVEAAGKDNSAGFIGFVLSTALT 813 (1054)
Q Consensus 770 kLiv~DiDGTL~~-----------~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~ 813 (1054)
|++|+|.||||.. .+.+.+.++|+.|+++ |+.++|+|.-+
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----G~~l~i~TN~~ 52 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKM----GYALVLVTNQS 52 (176)
T ss_pred CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHC----CCEEEEEeCCc
Confidence 7899999999931 1346789999999986 89999999765
No 274
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=92.68 E-value=0.078 Score=55.65 Aligned_cols=45 Identities=16% Similarity=0.257 Sum_probs=41.3
Q ss_pred CCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEecC
Q 001557 955 ASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKG 1002 (1054)
Q Consensus 955 asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMgN 1002 (1054)
.+|+.+++.+++++|++++++++ +||+.+ | ++|++.+|.++|+..
T Consensus 146 ~~k~~~~~~~~~~~~~~~~~~i~-iGDs~~-D-~~~a~~ag~~~a~~~ 190 (201)
T TIGR01491 146 DNKGEAVERLKRELNPSLTETVA-VGDSKN-D-LPMFEVADISISLGD 190 (201)
T ss_pred ccHHHHHHHHHHHhCCCHHHEEE-EcCCHh-H-HHHHHhcCCeEEECC
Confidence 47999999999999999999988 889988 9 999999999999964
No 275
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=92.29 E-value=0.63 Score=58.24 Aligned_cols=52 Identities=17% Similarity=0.098 Sum_probs=48.6
Q ss_pred EEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 771 VFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 771 Liv~DiDGTL------~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
++++.+||.+ ...+.+..++++++|++. |+.+++.||=+...++.+.+++|+
T Consensus 519 ~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~~~----Gi~~~mLTGDn~~~A~~iA~~lGI 576 (713)
T COG2217 519 VVFVAVDGKLVGVIALADELRPDAKEAIAALKAL----GIKVVMLTGDNRRTAEAIAKELGI 576 (713)
T ss_pred EEEEEECCEEEEEEEEeCCCChhHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCh
Confidence 7999999977 578999999999999997 999999999999999999999998
No 276
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=92.20 E-value=0.63 Score=49.56 Aligned_cols=45 Identities=7% Similarity=-0.052 Sum_probs=37.8
Q ss_pred cCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEE
Q 001557 952 PVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVI 999 (1054)
Q Consensus 952 p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVa 999 (1054)
...-.|...++++++++|++++++++ +||+.+ | +.+-..+|..++
T Consensus 135 ~~~Kp~p~~~~~~~~~~~~~~~~~~~-iGDs~~-D-i~aa~~aG~~~i 179 (214)
T PRK13288 135 EHAKPDPEPVLKALELLGAKPEEALM-VGDNHH-D-ILAGKNAGTKTA 179 (214)
T ss_pred CCCCCCcHHHHHHHHHcCCCHHHEEE-ECCCHH-H-HHHHHHCCCeEE
Confidence 34445788999999999999999998 999988 9 999988887554
No 277
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=92.02 E-value=0.71 Score=60.14 Aligned_cols=43 Identities=14% Similarity=0.057 Sum_probs=39.5
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 781 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 781 ~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
...+.+.++++|+.+++. ||.+..+||=....+..+.+++|+.
T Consensus 545 ~Dppr~~v~~aI~~l~~A----GI~v~MiTGD~~~TA~aIa~~~Gi~ 587 (917)
T COG0474 545 EDPPREDVKEAIEELREA----GIKVWMITGDHVETAIAIAKECGIE 587 (917)
T ss_pred cCCCCccHHHHHHHHHHC----CCcEEEECCCCHHHHHHHHHHcCCC
Confidence 467888999999999997 9999999999999999999999984
No 278
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=91.91 E-value=0.091 Score=53.69 Aligned_cols=90 Identities=18% Similarity=0.217 Sum_probs=58.1
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcc--------cceeeCCceEEe
Q 001557 544 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV--------DIHRVLDNGLLV 615 (1054)
Q Consensus 544 ~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~--------eiv~~~~~Gllv 615 (1054)
.+|.+.++. +++..+|+.| |++|.- +-+.|+.|++++|+|.|.-...... ..+.....|+.+
T Consensus 55 ~~v~~~~~~--~~m~~~m~~a----DlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~ 124 (167)
T PF04101_consen 55 PNVKVFGFV--DNMAELMAAA----DLVISH----AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIML 124 (167)
T ss_dssp CCCEEECSS--SSHHHHHHHH----SEEEEC----S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCS
T ss_pred CcEEEEech--hhHHHHHHHc----CEEEeC----CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCcccc
Confidence 567788874 5799999999 988853 3358999999999999887665521 112222334444
Q ss_pred CC--CCHHHHHHHHHHHHhCHHHHHHHHHH
Q 001557 616 DP--HDQQSIADALLKLVSDKQLWERCRQN 643 (1054)
Q Consensus 616 ~p--~d~~~la~aI~~ll~d~~~~~~~~~~ 643 (1054)
.. .+++.|.++|.+++.++....++.++
T Consensus 125 ~~~~~~~~~L~~~i~~l~~~~~~~~~~~~~ 154 (167)
T PF04101_consen 125 DESELNPEELAEAIEELLSDPEKLKEMAKA 154 (167)
T ss_dssp ECCC-SCCCHHHHHHCHCCCHH-SHHHCCC
T ss_pred CcccCCHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 32 23678999999999998875555444
No 279
>PRK08238 hypothetical protein; Validated
Probab=91.42 E-value=0.4 Score=57.62 Aligned_cols=48 Identities=23% Similarity=0.225 Sum_probs=42.4
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcCCcE
Q 001557 786 EIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSE 841 (1054)
Q Consensus 786 ~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~nGa~ 841 (1054)
+...+.+++++++ |..++|+|+.+...++.+++.+|+ ||.+||+++..
T Consensus 75 pga~e~L~~lk~~----G~~v~LaTas~~~~a~~i~~~lGl----Fd~Vigsd~~~ 122 (479)
T PRK08238 75 EEVLDYLRAERAA----GRKLVLATASDERLAQAVAAHLGL----FDGVFASDGTT 122 (479)
T ss_pred hhHHHHHHHHHHC----CCEEEEEeCCCHHHHHHHHHHcCC----CCEEEeCCCcc
Confidence 6778899999886 999999999999999999999997 68899988754
No 280
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=91.24 E-value=0.96 Score=52.50 Aligned_cols=41 Identities=7% Similarity=0.050 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEe
Q 001557 957 RSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVIL 1000 (1054)
Q Consensus 957 Kg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaM 1000 (1054)
+...+.+.++++|++++++++ +||+.. | +..=+.+|..++.
T Consensus 274 ~Peifl~A~~~lgl~Peecl~-IGDS~~-D-IeAAk~AGm~~Ig 314 (381)
T PLN02575 274 DPEMFIYAAQLLNFIPERCIV-FGNSNQ-T-VEAAHDARMKCVA 314 (381)
T ss_pred CHHHHHHHHHHcCCCcccEEE-EcCCHH-H-HHHHHHcCCEEEE
Confidence 567888999999999999999 899888 8 8888888865444
No 281
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=91.00 E-value=0.53 Score=47.40 Aligned_cols=57 Identities=9% Similarity=-0.016 Sum_probs=51.6
Q ss_pred CCCEEEEEEecCCC----ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 767 RRKYVFVIAADCDT----TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL----~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
.-.|-|++|+|.|| ....+++.++-+..+++. |+.++|.|-.+..-+..+.+.++++
T Consensus 26 ~Gikgvi~DlDNTLv~wd~~~~tpe~~~W~~e~k~~----gi~v~vvSNn~e~RV~~~~~~l~v~ 86 (175)
T COG2179 26 HGIKGVILDLDNTLVPWDNPDATPELRAWLAELKEA----GIKVVVVSNNKESRVARAAEKLGVP 86 (175)
T ss_pred cCCcEEEEeccCceecccCCCCCHHHHHHHHHHHhc----CCEEEEEeCCCHHHHHhhhhhcCCc
Confidence 34589999999999 577999999999999997 9999999999999999999999994
No 282
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=90.95 E-value=0.33 Score=58.95 Aligned_cols=92 Identities=16% Similarity=0.171 Sum_probs=55.9
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccC----cccceeeCCceEEeCCC-
Q 001557 544 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG----PVDIHRVLDNGLLVDPH- 618 (1054)
Q Consensus 544 ~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg----~~eiv~~~~~Gllv~p~- 618 (1054)
.++...+++|+.+ +++.. +.++||. =|--.++.||+.+|+|+|+-+.-| ....+...+.|+.++..
T Consensus 323 ~n~~~~~W~PQ~~---lL~hp--~v~~fit----HgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~ 393 (500)
T PF00201_consen 323 KNVLIVKWLPQND---LLAHP--RVKLFIT----HGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKND 393 (500)
T ss_dssp TTEEEESS--HHH---HHTST--TEEEEEE----S--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC
T ss_pred ceEEEeccccchh---hhhcc--cceeeee----ccccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecC
Confidence 4678889998864 45443 1145552 233468999999999999987533 12233344568877644
Q ss_pred -CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Q 001557 619 -DQQSIADALLKLVSDKQLWERCRQNGLKNI 648 (1054)
Q Consensus 619 -d~~~la~aI~~ll~d~~~~~~~~~~~~~~v 648 (1054)
+.+++.+||.++++|+. +++++.+..
T Consensus 394 ~~~~~l~~ai~~vl~~~~----y~~~a~~ls 420 (500)
T PF00201_consen 394 LTEEELRAAIREVLENPS----YKENAKRLS 420 (500)
T ss_dssp -SHHHHHHHHHHHHHSHH----HHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhhH----HHHHHHHHH
Confidence 56899999999999875 344444443
No 283
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=90.72 E-value=28 Score=38.27 Aligned_cols=140 Identities=15% Similarity=0.088 Sum_probs=76.4
Q ss_pred EEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHH-----------HHHcCCC--CC
Q 001557 479 LALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKL-----------IDKYDLY--GQ 545 (1054)
Q Consensus 479 l~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l-----------~~~~~l~--~~ 545 (1054)
+++||....||...+++.-+...+ + +++.-++-+-+-... .-.|... +++..+. ..
T Consensus 187 ~yigR~Tt~kG~~~mfD~h~~~lK--~-~~~~t~~~GierS~A--------~~~i~d~~~~~~y~~~~~~~~~~~~pN~~ 255 (355)
T PF11440_consen 187 RYIGRQTTWKGPRRMFDLHEKILK--P-AGFKTIMEGIERSPA--------KISIKDHGIPYEYYPKLDCDEPKPAPNSP 255 (355)
T ss_dssp EEE--SSGGG-HHHHHHHHHHTTT--T-TT-EEEEE---SSTH--------HHHHHHTT--EEEE-CTGGGG---SSS--
T ss_pred eeeeeeeeecCcHHHhhhHHHhcC--C-cchhHHhhhhhcCCc--------eeeeecCCcccccCccccccCcccCCCCc
Confidence 899999999999999999988743 3 677766655432111 0111111 1122222 23
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEecC------CCCCCcHHHHHHHHcCC-CEEEccccCccc-------ceeeCCc
Q 001557 546 VAYPKHHKQSDVPDIYRLAAKTKGVFINPA------FIEPFGLTLIEAAAYGL-PIVATKNGGPVD-------IHRVLDN 611 (1054)
Q Consensus 546 V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps------~~Egfgl~l~EAmA~G~-PVIat~~Gg~~e-------iv~~~~~ 611 (1054)
+-.+|..=.+|..+.++.+ .+...-+ +.+.+-.+-+|..|||+ ||.-...|..-. ++.....
T Consensus 256 ~~v~~~Yi~~E~~~~Maks----~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~~ 331 (355)
T PF11440_consen 256 VPVYGPYIRSEGLERMAKS----LFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPYS 331 (355)
T ss_dssp EEEESS--HHHHHHHHHTE----EEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--S
T ss_pred ceecchhhhHHHHHHHhhc----cceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccCcc
Confidence 5566766677888888888 5554333 23568899999999997 555555554322 2223345
Q ss_pred eEEeCCCCHHHHHHHHHHHHhC
Q 001557 612 GLLVDPHDQQSIADALLKLVSD 633 (1054)
Q Consensus 612 Gllv~p~d~~~la~aI~~ll~d 633 (1054)
.+.++..|.++-.+.|.++.++
T Consensus 332 ~I~~De~dle~T~ekl~E~a~~ 353 (355)
T PF11440_consen 332 AIYFDENDLESTVEKLIEVANN 353 (355)
T ss_dssp -EEE-TTSHHHHHHHHHHHHT-
T ss_pred eeEeccchHHHHHHHHHHHhcc
Confidence 7889989999888888877654
No 284
>PRK06769 hypothetical protein; Validated
Probab=90.54 E-value=0.41 Score=49.42 Aligned_cols=55 Identities=13% Similarity=0.072 Sum_probs=41.0
Q ss_pred CCEEEEEEecCCCC----------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHH--------HHHHHHHhCCC
Q 001557 768 RKYVFVIAADCDTT----------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTIL--------ELHSLLVSGGL 826 (1054)
Q Consensus 768 ~kkLiv~DiDGTL~----------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~--------~i~~~l~~l~l 826 (1054)
..|+|++|.||||. -.+-+.++++|++|++. |+.++|+|+-+.. .+...++.+|+
T Consensus 3 ~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~ 75 (173)
T PRK06769 3 NIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKAN----HIKIFSFTNQPGIADGIATIADFVQELKGFGF 75 (173)
T ss_pred CCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHC----CCEEEEEECCchhcCCcCCHHHHHHHHHhCCc
Confidence 45899999999992 12457889999999986 8999999986531 23444666666
No 285
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=90.35 E-value=0.17 Score=53.24 Aligned_cols=48 Identities=23% Similarity=0.138 Sum_probs=42.8
Q ss_pred ecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEec
Q 001557 951 IPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 1001 (1054)
Q Consensus 951 ~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMg 1001 (1054)
...+-.|..+++.++++.+++++++++ +||+.+ | ++|++.+|.++++.
T Consensus 150 ~~~g~~K~~~l~~~~~~~~~~~~~~~~-~gDs~~-D-~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 150 NCKGEGKVHALAELLAEEQIDLKDSYA-YGDSIS-D-LPLLSLVGHPYVVN 197 (202)
T ss_pred CCCChHHHHHHHHHHHHcCCCHHHcEe-eeCCcc-c-HHHHHhCCCcEEeC
Confidence 345678999999999999999999999 788888 9 99999999999885
No 286
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=90.06 E-value=42 Score=38.72 Aligned_cols=105 Identities=11% Similarity=0.093 Sum_probs=60.8
Q ss_pred CCcEEEEEeCCCCCCCHH--HHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001557 474 RKPMILALARPDPKKNIT--TLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKH 551 (1054)
Q Consensus 474 ~~~~Il~vgRld~~Kgi~--~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~ 551 (1054)
+..++++.|.-.+.|..+ ...+.+..+.+ ....+ +++|+..+.+ ......+.+.......+.+.|.
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~--~~~~v-vl~ggp~e~e---------~~~~~~i~~~~~~~~~~~l~g~ 250 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA--RGYEV-VLTSGPDKDD---------LACVNEIAQGCQTPPVTALAGK 250 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH--CCCeE-EEEcCCChHH---------HHHHHHHHHhcCCCccccccCC
Confidence 344566777656667654 55555555532 23344 3444432111 1112223332222234667888
Q ss_pred CCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccc
Q 001557 552 HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN 599 (1054)
Q Consensus 552 ~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~ 599 (1054)
.+-.++.++++.| +++|-.- . -.+-=|.|.|+|+|+-.-
T Consensus 251 ~sL~el~ali~~a----~l~v~nD---S--Gp~HlAaA~g~P~v~lfG 289 (352)
T PRK10422 251 TTFPELGALIDHA----QLFIGVD---S--APAHIAAAVNTPLICLFG 289 (352)
T ss_pred CCHHHHHHHHHhC----CEEEecC---C--HHHHHHHHcCCCEEEEEC
Confidence 8889999999999 9999652 2 234446788999998653
No 287
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=90.03 E-value=0.46 Score=50.94 Aligned_cols=37 Identities=14% Similarity=0.100 Sum_probs=28.7
Q ss_pred CHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEE
Q 001557 956 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVI 999 (1054)
Q Consensus 956 sKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVa 999 (1054)
.|..+++ +++.+.+++++ +||+.+ | +.|.+.+|..++
T Consensus 148 ~K~~~l~----~~~~~~~~~i~-iGDs~~-D-i~aa~~Ag~~~a 184 (219)
T PRK09552 148 CKPSLIR----KLSDTNDFHIV-IGDSIT-D-LEAAKQADKVFA 184 (219)
T ss_pred chHHHHH----HhccCCCCEEE-EeCCHH-H-HHHHHHCCccee
Confidence 4666554 45777888888 899999 9 999999988555
No 288
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=89.88 E-value=1.4 Score=47.05 Aligned_cols=42 Identities=14% Similarity=0.123 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHhCCCccCEEEEeCcCC-CccccccccCcceE-EEec
Q 001557 957 RSQALRYLHVRWGIDLSNVVVIAGECG-DTDYEGLLGGVHKT-VILK 1001 (1054)
Q Consensus 957 Kg~AL~~L~~~~gI~~e~vvaf~GD~~-d~D~~eML~~ag~g-VaMg 1001 (1054)
+......+++++|++++++++ +||+. + | +..=+.+|.. |.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~-igDs~~~-d-i~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 152 HPKIFYAALKRLGVKPEEAVM-VGDRLDK-D-IKGAKNLGMKTVWIN 195 (221)
T ss_pred CHHHHHHHHHHcCCChhhEEE-ECCChHH-H-HHHHHHCCCEEEEEC
Confidence 456889999999999999988 88886 6 7 8888888864 4443
No 289
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=89.59 E-value=0.55 Score=54.05 Aligned_cols=55 Identities=15% Similarity=0.097 Sum_probs=43.3
Q ss_pred CEEEEEEecCCCCh--------------hhHHHHHHHHHHHhccCCCCceEEEEEcCC---------------CHHHHHH
Q 001557 769 KYVFVIAADCDTTS--------------DFLEIIKKVVEAAGKDNSAGFIGFVLSTAL---------------TILELHS 819 (1054)
Q Consensus 769 kkLiv~DiDGTL~~--------------~i~~~~~~al~~l~~~~~~~gi~fvIaTGR---------------~~~~i~~ 819 (1054)
+|++|||.||||.. .+-+.+.++|..|+++ |+.++|+|.- +...+..
T Consensus 2 ~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~----G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~ 77 (354)
T PRK05446 2 QKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKA----GYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQ 77 (354)
T ss_pred CcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHhC----CCeEEEEECCccccCccccHHHHhhHHHHHHH
Confidence 68999999999932 3456689999999886 8999999983 3445677
Q ss_pred HHHhCCCC
Q 001557 820 LLVSGGLS 827 (1054)
Q Consensus 820 ~l~~l~l~ 827 (1054)
+++.+++.
T Consensus 78 iL~~~gl~ 85 (354)
T PRK05446 78 IFESQGIK 85 (354)
T ss_pred HHHHcCCc
Confidence 88888883
No 290
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=89.50 E-value=1 Score=48.90 Aligned_cols=36 Identities=11% Similarity=-0.044 Sum_probs=28.2
Q ss_pred HHHHHHHHhccCCCCceEEEEEcCCC----HHHHHHHHHhCCCC
Q 001557 788 IKKVVEAAGKDNSAGFIGFVLSTALT----ILELHSLLVSGGLS 827 (1054)
Q Consensus 788 ~~~al~~l~~~~~~~gi~fvIaTGR~----~~~i~~~l~~l~l~ 827 (1054)
.+++|+.++++ |+.++++|||+ ...+..+++.+|++
T Consensus 119 a~elL~~L~~~----G~~I~iVTnR~~~k~~~t~~~Llk~~gip 158 (237)
T PRK11009 119 ARQLIDMHVKR----GDSIYFITGRTATKTETVSKTLADDFHIP 158 (237)
T ss_pred HHHHHHHHHHC----CCeEEEEeCCCCcccHHHHHHHHHHcCCC
Confidence 78889999886 89999999996 33555666668883
No 291
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=89.02 E-value=5 Score=44.22 Aligned_cols=152 Identities=20% Similarity=0.250 Sum_probs=86.1
Q ss_pred eC-CCCCCCHHHHHHHHHhcccccCCCcEEE---EEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCC------C
Q 001557 482 AR-PDPKKNITTLVKAFGECRPLRELANLTL---IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPK------H 551 (1054)
Q Consensus 482 gR-ld~~Kgi~~ll~A~~~l~~~~~~~~l~L---IiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g------~ 551 (1054)
+| ++...|+..++.++..+..... .+++ ++..-+ +..+..+.++-+|.+.-...+ +
T Consensus 234 sR~pea~~nl~~il~slcal~~~~a--~vvfw~ai~~~lp------------l~~l~~l~e~~gWq~~ad~~~kdnc~l~ 299 (412)
T COG4370 234 SRVPEAQTNLAVILGSLCALPAMFA--LVVFWAAIAPELP------------LLLLWTLEERQGWQPLADRFGKDNCSLW 299 (412)
T ss_pred CCChHHHhhHHHHHHHHhhhHHHHH--HHHHHhccCcCCC------------HHHHHHHHHhcCcchhhhhhccCceEEE
Confidence 45 5567899998887766643211 2222 222222 233444555555543222111 2
Q ss_pred CCCCcHHHHHHHhhcCCcEEEecCCCCCC-cHHHHHHHHcCCCEEEccccCcccce-------e-eCCceEEeCCCCHHH
Q 001557 552 HKQSDVPDIYRLAAKTKGVFINPAFIEPF-GLTLIEAAAYGLPIVATKNGGPVDIH-------R-VLDNGLLVDPHDQQS 622 (1054)
Q Consensus 552 ~~~~dl~~ly~~Aa~~~dv~v~ps~~Egf-gl~l~EAmA~G~PVIat~~Gg~~eiv-------~-~~~~Gllv~p~d~~~ 622 (1054)
+++....+++..| |+.+ +| |...=.|.-.|+|||+...-|+.=.- . -+..-++++|. .+.
T Consensus 300 lsqqsfadiLH~a----daal------gmAGTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~~-aq~ 368 (412)
T COG4370 300 LSQQSFADILHAA----DAAL------GMAGTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRPE-AQA 368 (412)
T ss_pred EeHHHHHHHHHHH----HHHH------HhccchHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCCc-hhh
Confidence 3466788999999 7755 33 33344467779999999866653110 0 02223566653 333
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHH
Q 001557 623 IADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCK 658 (1054)
Q Consensus 623 la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~ 658 (1054)
-+.+..+++.|++..+.++.|+.+++ +.=.-..+++
T Consensus 369 a~~~~q~ll~dp~r~~air~nGqrRiGqaGaa~rIAe 405 (412)
T COG4370 369 AAQAVQELLGDPQRLTAIRHNGQRRIGQAGAARRIAE 405 (412)
T ss_pred HHHHHHHHhcChHHHHHHHhcchhhccCcchHHHHHH
Confidence 33444449999999999999999998 5433333333
No 292
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=88.79 E-value=1.2 Score=48.78 Aligned_cols=67 Identities=18% Similarity=0.134 Sum_probs=50.3
Q ss_pred CCCEEEEEEecCCC-C----hh-hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcC
Q 001557 767 RRKYVFVIAADCDT-T----SD-FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNS 838 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL-~----~~-i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~n 838 (1054)
....+||||+|.|| + .+ ..+.+.+.|..|++. +-+.+..++|-. ..+..-++++++. .-||.+||.+
T Consensus 120 ~~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~~---g~vLvLWSyG~~-eHV~~sl~~~~L~-~~Fd~ii~~G 192 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGDVRIRDPAVYDSLRELKEQ---GCVLVLWSYGNR-EHVRHSLKELKLE-GYFDIIICGG 192 (297)
T ss_pred CCCcEEEEECCCcccccCCccccCChHHHHHHHHHHHc---CCEEEEecCCCH-HHHHHHHHHhCCc-cccEEEEeCC
Confidence 45689999999999 2 12 457888999999997 447776777764 5556778888886 5589888843
No 293
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=88.63 E-value=0.67 Score=52.91 Aligned_cols=66 Identities=8% Similarity=-0.018 Sum_probs=45.3
Q ss_pred EEEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEE---cCCCHHHHHHHH-HhCCCCCCCCcEEEEc
Q 001557 771 VFVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLS---TALTILELHSLL-VSGGLSPLAFDAFICN 837 (1054)
Q Consensus 771 Liv~DiDGTL--~~~i~~~~~~al~~l~~~~~~~gi~fvIa---TGR~~~~i~~~l-~~l~l~~~~~d~lI~~ 837 (1054)
.|+||+|||| ...+.+...++++.++.....-|+.+++. +|++.......+ +.+|++. .++-++++
T Consensus 2 ~~ifD~DGvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~-~~~~i~~s 73 (321)
T TIGR01456 2 GFAFDIDGVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDV-SPLQVIQS 73 (321)
T ss_pred EEEEeCcCceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCC-CHHHHHhh
Confidence 5899999999 56778999999999986210115555554 578888876665 8888863 33334443
No 294
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=88.52 E-value=0.22 Score=51.07 Aligned_cols=42 Identities=21% Similarity=0.257 Sum_probs=36.7
Q ss_pred EecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCc
Q 001557 950 VIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGV 994 (1054)
Q Consensus 950 V~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~a 994 (1054)
..|.+.+|+.+++.+++.+|++++++++ +||+.+ | ++|++.+
T Consensus 136 ~~~~~~~K~~~l~~~~~~~~~~~~~~~~-iGDs~~-D-~~~~~~a 177 (177)
T TIGR01488 136 VNPEGECKGKVLKELLEESKITLKKIIA-VGDSVN-D-LPMLKLA 177 (177)
T ss_pred ccCCcchHHHHHHHHHHHhCCCHHHEEE-EeCCHH-H-HHHHhcC
Confidence 3567889999999999999999999988 888888 8 9998764
No 295
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=87.90 E-value=0.85 Score=47.11 Aligned_cols=40 Identities=10% Similarity=0.057 Sum_probs=30.5
Q ss_pred cCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceE
Q 001557 952 PVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKT 997 (1054)
Q Consensus 952 p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~g 997 (1054)
+.+..|+..++.+...+ ++++++ +||+.+ | +++.+.++.-
T Consensus 145 ~~g~~K~~~~~~~~~~~---~~~~i~-iGD~~~-D-~~aa~~~d~~ 184 (188)
T TIGR01489 145 PCGCCKGKVIHKLSEPK---YQHIIY-IGDGVT-D-VCPAKLSDVV 184 (188)
T ss_pred CCCCCHHHHHHHHHhhc---CceEEE-ECCCcc-h-hchHhcCCcc
Confidence 56677999999888765 566666 899999 9 8888777543
No 296
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=87.63 E-value=0.63 Score=45.66 Aligned_cols=117 Identities=24% Similarity=0.214 Sum_probs=60.6
Q ss_pred CCcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCC-CCCccc
Q 001557 190 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFG-PKDKYV 268 (1054)
Q Consensus 190 tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g-~~~~~l 268 (1054)
++|...-...|+++|.++ | |+|.+.|... +.+. + ...|+.++.++.. +.....
T Consensus 8 t~Ghv~P~lala~~L~~r-G-h~V~~~~~~~--------~~~~---------------v-~~~Gl~~~~~~~~~~~~~~~ 61 (139)
T PF03033_consen 8 TRGHVYPFLALARALRRR-G-HEVRLATPPD--------FRER---------------V-EAAGLEFVPIPGDSRLPRSL 61 (139)
T ss_dssp SHHHHHHHHHHHHHHHHT-T--EEEEEETGG--------GHHH---------------H-HHTT-EEEESSSCGGGGHHH
T ss_pred ChhHHHHHHHHHHHHhcc-C-CeEEEeeccc--------ceec---------------c-cccCceEEEecCCcCcCccc
Confidence 389999999999999999 8 9999998631 1111 1 2348888887765 111100
Q ss_pred -ccccCCCChHHHHHHHHHHHHHHHHHHhhhh-----cCCCCCcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCC
Q 001557 269 -QKELLWPHIPEFVDAALTHIIQISKVLGEQV-----GSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSL 339 (1054)
Q Consensus 269 -~k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~-----~~~~~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l 339 (1054)
....+.. +... ...+.+..+.+.+.. ..+....+|++.++. ....+..++..+++|.+.+....
T Consensus 62 ~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~vaE~~~iP~~~~~~~p 131 (139)
T PF03033_consen 62 EPLANLRR----LARL-IRGLEEAMRILARFRPDLVVAAGGYVADDVIIAAP--LAFAAALVAEQLGIPGVANRLFP 131 (139)
T ss_dssp HHHHHHHC----HHHH-HHHHHHHHHHHHHHHHCCCCHCTTTTECCEECHHH--HHTHHHHHHHHHTS-EEEEESSG
T ss_pred chhhhhhh----HHHH-hhhhhHHHHHhhccCcchhhhccCcccchHHHhhh--hcCccceeEhhhCchHHHHhhCC
Confidence 1111111 1111 111222222222211 112223455554332 34566778888999999887754
No 297
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=87.50 E-value=1.8 Score=47.90 Aligned_cols=40 Identities=13% Similarity=0.130 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEE
Q 001557 957 RSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVI 999 (1054)
Q Consensus 957 Kg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVa 999 (1054)
+...+.+.++++|++++++++ +||+.. | +..=..+|..++
T Consensus 167 ~Pe~~~~a~~~l~~~p~~~l~-IgDs~~-D-i~aA~~aG~~~i 206 (260)
T PLN03243 167 DPEMFMYAAERLGFIPERCIV-FGNSNS-S-VEAAHDGCMKCV 206 (260)
T ss_pred CHHHHHHHHHHhCCChHHeEE-EcCCHH-H-HHHHHHcCCEEE
Confidence 456888999999999999999 999988 8 888888887554
No 298
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=87.33 E-value=1.4 Score=48.43 Aligned_cols=55 Identities=13% Similarity=0.000 Sum_probs=41.8
Q ss_pred CEEEEEEecCCC--C----------------------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCH---H
Q 001557 769 KYVFVIAADCDT--T----------------------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTI---L 815 (1054)
Q Consensus 769 kkLiv~DiDGTL--~----------------------------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~---~ 815 (1054)
+-+++||||.|+ + ....+.+.+..+.+++. |+.+++.|||+- .
T Consensus 101 ~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~----G~kIf~VSgR~e~~r~ 176 (275)
T TIGR01680 101 KDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSL----GFKIIFLSGRLKDKQA 176 (275)
T ss_pred CCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHC----CCEEEEEeCCchhHHH
Confidence 478999999998 0 11245677888888886 999999999974 3
Q ss_pred HHHHHHHhCCCC
Q 001557 816 ELHSLLVSGGLS 827 (1054)
Q Consensus 816 ~i~~~l~~l~l~ 827 (1054)
.....|...|++
T Consensus 177 aT~~NL~kaGy~ 188 (275)
T TIGR01680 177 VTEANLKKAGYH 188 (275)
T ss_pred HHHHHHHHcCCC
Confidence 456677888884
No 299
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=86.84 E-value=5.6 Score=49.55 Aligned_cols=89 Identities=18% Similarity=0.200 Sum_probs=55.6
Q ss_pred cHHHHHHHHHHhcCeEEEEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEec
Q 001557 922 PVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 1001 (1054)
Q Consensus 922 ~~~el~~~l~~~~~~~~v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMg 1001 (1054)
.-+++.+.++.+ .+.-+.++.+...+=|+- =|++.| ++|+..||+-| | -+-|+.++.|||||
T Consensus 670 ~~~qld~il~nh-~eIVFARTSPqQKLiIVe-----------~cQr~G----aiVaVTGDGVN-D-sPALKKADIGVAMG 731 (1019)
T KOG0203|consen 670 SSEQLDELLQNH-QEIVFARTSPQQKLIIVE-----------GCQRQG----AIVAVTGDGVN-D-SPALKKADIGVAMG 731 (1019)
T ss_pred CHHHHHHHHHhC-CceEEEecCccceEEeEh-----------hhhhcC----cEEEEeCCCcC-C-Chhhcccccceeec
Confidence 345677777654 334445555543444432 155555 57887999999 9 99999999999999
Q ss_pred CcchhH-HhhhhccCCCcccccccCCCceEEeccccC
Q 001557 1002 GVGESA-RKLHANRNYSLEDVISFDSHNVIQVDEACD 1037 (1054)
Q Consensus 1002 Na~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~t~~~~ 1037 (1054)
=|. | .-++++| ++=.|...+..|| +++
T Consensus 732 iaG--SDvsKqAAD------mILLDDNFASIVt-GVE 759 (1019)
T KOG0203|consen 732 IAG--SDVSKQAAD------MILLDDNFASIVT-GVE 759 (1019)
T ss_pred ccc--chHHHhhcc------eEEecCcchhhee-ecc
Confidence 666 5 3345554 3444444455553 443
No 300
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=86.72 E-value=0.44 Score=48.49 Aligned_cols=53 Identities=15% Similarity=0.088 Sum_probs=36.5
Q ss_pred EEEEEEecCCC--C-------------hhhHHHHHHHHHHHhccCCCCceEEEEEc-----CC--CH-------HHHHHH
Q 001557 770 YVFVIAADCDT--T-------------SDFLEIIKKVVEAAGKDNSAGFIGFVLST-----AL--TI-------LELHSL 820 (1054)
Q Consensus 770 kLiv~DiDGTL--~-------------~~i~~~~~~al~~l~~~~~~~gi~fvIaT-----GR--~~-------~~i~~~ 820 (1054)
|+.+||+|||| + .-+.+.+.++|+++.++ |..+||.| |+ .. .-+..+
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~----Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~i 76 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKK----GYKIVIVTNQSGIGRGMGEKDLENFHEKIENI 76 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHT----TEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhc----CCeEEEEeCccccccccccchHHHHHHHHHHH
Confidence 68999999999 1 11455789999999886 88888887 55 11 233456
Q ss_pred HHhCCC
Q 001557 821 LVSGGL 826 (1054)
Q Consensus 821 l~~l~l 826 (1054)
++.+++
T Consensus 77 l~~l~i 82 (159)
T PF08645_consen 77 LKELGI 82 (159)
T ss_dssp HHHCTS
T ss_pred HHHcCC
Confidence 777777
No 301
>PLN03190 aminophospholipid translocase; Provisional
Probab=86.58 E-value=2.9 Score=55.82 Aligned_cols=42 Identities=14% Similarity=-0.009 Sum_probs=38.2
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 781 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 781 ~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
...+.+.+.++++++++. |+.+.+.||-....+..+..++++
T Consensus 724 ~D~lr~~v~~~I~~l~~a----gi~v~mlTGD~~~tAi~IA~s~~L 765 (1178)
T PLN03190 724 EDKLQQGVPEAIESLRTA----GIKVWVLTGDKQETAISIGYSSKL 765 (1178)
T ss_pred ecCCchhHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHhCC
Confidence 456788899999999986 999999999999999999999998
No 302
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=86.44 E-value=0.67 Score=49.22 Aligned_cols=54 Identities=13% Similarity=0.241 Sum_probs=40.9
Q ss_pred CCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEecCcchhHHhhhhccCC
Q 001557 953 VLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNY 1016 (1054)
Q Consensus 953 ~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMgNa~~~~~~~~~~~~~ 1016 (1054)
..-.|...++.+ +..|. ++++ +||+.| | +.|++.+|.+|+|. ..+.+...++.+
T Consensus 129 ~~~~K~~~l~~l-~~~~~---~~v~-vGDs~n-D-l~ml~~Ag~~ia~~---ak~~~~~~~~~~ 182 (203)
T TIGR02137 129 QKDPKRQSVIAF-KSLYY---RVIA-AGDSYN-D-TTMLSEAHAGILFH---APENVIREFPQF 182 (203)
T ss_pred CcchHHHHHHHH-HhhCC---CEEE-EeCCHH-H-HHHHHhCCCCEEec---CCHHHHHhCCCC
Confidence 345799999988 45664 5776 899999 9 99999999999997 334555555543
No 303
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=86.18 E-value=0.77 Score=47.14 Aligned_cols=53 Identities=9% Similarity=0.045 Sum_probs=36.9
Q ss_pred EEEEEEecCCC------Ch----------------------hhHHHHHHHHHHHhccCCCCceEEEEEcCC-CHHHHHHH
Q 001557 770 YVFVIAADCDT------TS----------------------DFLEIIKKVVEAAGKDNSAGFIGFVLSTAL-TILELHSL 820 (1054)
Q Consensus 770 kLiv~DiDGTL------~~----------------------~i~~~~~~al~~l~~~~~~~gi~fvIaTGR-~~~~i~~~ 820 (1054)
||||||+|+|| +. .+-+.+..+|+.|++. |+.+++||-- .+.-++++
T Consensus 4 klvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~----gv~lavASRt~~P~~A~~~ 79 (169)
T PF12689_consen 4 KLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKER----GVKLAVASRTDEPDWAREL 79 (169)
T ss_dssp SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHC----T--EEEEE--S-HHHHHHH
T ss_pred cEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHC----CCEEEEEECCCChHHHHHH
Confidence 89999999999 11 2346778899999986 9999999854 46788999
Q ss_pred HHhCCC
Q 001557 821 LVSGGL 826 (1054)
Q Consensus 821 l~~l~l 826 (1054)
|+.+++
T Consensus 80 L~~l~i 85 (169)
T PF12689_consen 80 LKLLEI 85 (169)
T ss_dssp HHHTT-
T ss_pred HHhcCC
Confidence 999888
No 304
>PRK11587 putative phosphatase; Provisional
Probab=86.14 E-value=5.2 Score=42.69 Aligned_cols=44 Identities=9% Similarity=-0.069 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcce-EEEecCc
Q 001557 957 RSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHK-TVILKGV 1003 (1054)
Q Consensus 957 Kg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~-gVaMgNa 1003 (1054)
+.......++++|++++++++ +||+-. | +..=..+|. .|++.+.
T Consensus 140 ~p~~~~~~~~~~g~~p~~~l~-igDs~~-d-i~aA~~aG~~~i~v~~~ 184 (218)
T PRK11587 140 EPDAYLLGAQLLGLAPQECVV-VEDAPA-G-VLSGLAAGCHVIAVNAP 184 (218)
T ss_pred CcHHHHHHHHHcCCCcccEEE-Eecchh-h-hHHHHHCCCEEEEECCC
Confidence 456777888999999999998 888888 8 888888885 5666543
No 305
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=85.02 E-value=0.75 Score=49.80 Aligned_cols=56 Identities=11% Similarity=0.014 Sum_probs=42.7
Q ss_pred CCEEEEEEecCCC-C----------------------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHH---
Q 001557 768 RKYVFVIAADCDT-T----------------------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTIL--- 815 (1054)
Q Consensus 768 ~kkLiv~DiDGTL-~----------------------------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~--- 815 (1054)
.+..++||||.|+ + ....+...+.++.+++. |+.|+++|||+-.
T Consensus 71 ~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~----G~~V~~iT~R~~~~r~ 146 (229)
T PF03767_consen 71 KPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSR----GVKVFFITGRPESQRE 146 (229)
T ss_dssp SEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHT----TEEEEEEEEEETTCHH
T ss_pred CCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHC----CCeEEEEecCCchhHH
Confidence 4578999999997 1 22344577899999987 9999999999654
Q ss_pred HHHHHHHhCCCC
Q 001557 816 ELHSLLVSGGLS 827 (1054)
Q Consensus 816 ~i~~~l~~l~l~ 827 (1054)
.....|...|+.
T Consensus 147 ~T~~nL~~~G~~ 158 (229)
T PF03767_consen 147 ATEKNLKKAGFP 158 (229)
T ss_dssp HHHHHHHHHTTS
T ss_pred HHHHHHHHcCCC
Confidence 555677777873
No 306
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=84.98 E-value=0.98 Score=48.60 Aligned_cols=45 Identities=16% Similarity=0.138 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEE
Q 001557 786 EIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFI 835 (1054)
Q Consensus 786 ~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI 835 (1054)
+.+.++|..|+++ |+.++++|+.+...+...++.+|+. ..|+.+|
T Consensus 89 pGv~~~l~~L~~~----~i~~avaS~s~~~~~~~~L~~~gl~-~~f~~~v 133 (221)
T COG0637 89 PGVVELLEQLKAR----GIPLAVASSSPRRAAERVLARLGLL-DYFDVIV 133 (221)
T ss_pred ccHHHHHHHHHhc----CCcEEEecCChHHHHHHHHHHccCh-hhcchhc
Confidence 3445667777775 6888888888888888888888874 2344443
No 307
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=84.83 E-value=0.83 Score=47.37 Aligned_cols=38 Identities=8% Similarity=0.026 Sum_probs=32.3
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 786 EIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 786 ~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
+.+.+.|+.++++ |+.++|+||-+...+..+++.++++
T Consensus 92 ~~~~e~i~~~~~~----~~~v~IvS~~~~~~i~~~~~~~~i~ 129 (192)
T PF12710_consen 92 PDAMELIRELKDN----GIKVVIVSGSPDEIIEPIAERLGID 129 (192)
T ss_dssp TTHHHHHHHHHHT----TSEEEEEEEEEHHHHHHHHHHTTSS
T ss_pred hhHHHHHHHHHHC----CCEEEEECCCcHHHHHHHHHHcCCC
Confidence 4556888888876 8999999999999999999999883
No 308
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=84.33 E-value=3.7 Score=54.68 Aligned_cols=42 Identities=14% Similarity=0.016 Sum_probs=38.1
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 781 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 781 ~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
...+-+.+.++|+.+++. ||.+.+.||=....+..+..++|+
T Consensus 629 eD~lq~~v~etI~~L~~A----GIkv~mlTGD~~~TA~~IA~~~~i 670 (1057)
T TIGR01652 629 EDKLQEGVPETIELLRQA----GIKIWVLTGDKVETAINIGYSCRL 670 (1057)
T ss_pred hhhhhhccHHHHHHHHHC----CCeEEEEcCCcHHHHHHHHHHhCC
Confidence 356778889999999996 999999999999999999999998
No 309
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=84.19 E-value=2.1 Score=50.01 Aligned_cols=56 Identities=9% Similarity=0.115 Sum_probs=47.0
Q ss_pred cCCCEEEEEEecCCC-------C------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCC
Q 001557 766 RRRKYVFVIAADCDT-------T------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGG 825 (1054)
Q Consensus 766 ~~~kkLiv~DiDGTL-------~------------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~ 825 (1054)
...+|.+|+|+|+|| + ...-...++.|+.+.++ |+.++|||=-+...+++.+...+
T Consensus 219 g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~kq----GVlLav~SKN~~~da~evF~khp 293 (574)
T COG3882 219 GKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKKQ----GVLLAVCSKNTEKDAKEVFRKHP 293 (574)
T ss_pred CcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHhc----cEEEEEecCCchhhHHHHHhhCC
Confidence 366799999999999 1 34556788889999987 99999999999999999987643
No 310
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=83.95 E-value=1.3 Score=46.94 Aligned_cols=39 Identities=18% Similarity=0.078 Sum_probs=30.5
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 784 FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 784 i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
+.+.+.++|+.+++. + .++|+||-....+.++++.+|++
T Consensus 69 l~pga~ell~~lk~~----~-~~~IVS~~~~~~~~~il~~lgi~ 107 (203)
T TIGR02137 69 PLEGAVEFVDWLRER----F-QVVILSDTFYEFSQPLMRQLGFP 107 (203)
T ss_pred CCccHHHHHHHHHhC----C-eEEEEeCChHHHHHHHHHHcCCc
Confidence 344556677777764 4 78899999999999999999984
No 311
>PLN02207 UDP-glycosyltransferase
Probab=83.31 E-value=19 Score=43.42 Aligned_cols=133 Identities=13% Similarity=0.178 Sum_probs=74.1
Q ss_pred CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCC--chhhhhchHHHHHHHHHHHHHcCCCCCEEeC
Q 001557 474 RKPMILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDD--IDEMSGTNAALLLSILKLIDKYDLYGQVAYP 549 (1054)
Q Consensus 474 ~~~~Il~vgRld--~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~--~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~ 549 (1054)
+..+.+++|... ..+-+..+..+++.+. ..+.+++.+... .+.+. . ...++. .+++.+.
T Consensus 275 ~sVVyvSfGS~~~~~~~q~~ela~~l~~~~-----~~flW~~r~~~~~~~~~lp-------~---~f~er~--~~~g~i~ 337 (468)
T PLN02207 275 ASVVFLCFGSMGRLRGPLVKEIAHGLELCQ-----YRFLWSLRTEEVTNDDLLP-------E---GFLDRV--SGRGMIC 337 (468)
T ss_pred CcEEEEEeccCcCCCHHHHHHHHHHHHHCC-----CcEEEEEeCCCccccccCC-------H---HHHhhc--CCCeEEE
Confidence 345677778654 2334667777777662 245455553211 00111 1 111222 2455566
Q ss_pred CCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCccc-----ceeeCCceEEeC--------
Q 001557 550 KHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD-----IHRVLDNGLLVD-------- 616 (1054)
Q Consensus 550 g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~e-----iv~~~~~Gllv~-------- 616 (1054)
++.|+.+|-. ..+ .++||.= -|+ .+++||+.+|+|+|+-...+=.- ++...+.|+-+.
T Consensus 338 ~W~PQ~~IL~---H~~--vg~FvTH---~Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~ 408 (468)
T PLN02207 338 GWSPQVEILA---HKA--VGGFVSH---CGW-NSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSD 408 (468)
T ss_pred EeCCHHHHhc---ccc--cceeeec---Ccc-ccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccC
Confidence 8888875443 331 1445521 233 46789999999999987644221 122234565331
Q ss_pred -CCCHHHHHHHHHHHHh
Q 001557 617 -PHDQQSIADALLKLVS 632 (1054)
Q Consensus 617 -p~d~~~la~aI~~ll~ 632 (1054)
.-+.++++++|++++.
T Consensus 409 ~~v~~e~i~~av~~vm~ 425 (468)
T PLN02207 409 EIVNANEIETAIRCVMN 425 (468)
T ss_pred CcccHHHHHHHHHHHHh
Confidence 2277899999999996
No 312
>PTZ00445 p36-lilke protein; Provisional
Probab=83.23 E-value=1.5 Score=46.15 Aligned_cols=50 Identities=8% Similarity=0.080 Sum_probs=38.1
Q ss_pred EecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcce-EEEecC
Q 001557 950 VIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHK-TVILKG 1002 (1054)
Q Consensus 950 V~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~-gVaMgN 1002 (1054)
+.|.-..|..=++++++++|+++++++. +||... . ++--+..|. ++...+
T Consensus 156 ~KPdp~iK~yHle~ll~~~gl~peE~LF-IDD~~~-N-VeaA~~lGi~ai~f~~ 206 (219)
T PTZ00445 156 DAPMPLDKSYHLKQVCSDFNVNPDEILF-IDDDMN-N-CKNALKEGYIALHVTG 206 (219)
T ss_pred cCCCccchHHHHHHHHHHcCCCHHHeEe-ecCCHH-H-HHHHHHCCCEEEEcCC
Confidence 3466778888899999999999999977 888766 5 777777774 444443
No 313
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=83.00 E-value=2.2 Score=45.51 Aligned_cols=40 Identities=13% Similarity=0.014 Sum_probs=29.9
Q ss_pred CCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEe
Q 001557 954 LASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVIL 1000 (1054)
Q Consensus 954 ~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaM 1000 (1054)
|..|..+++.+. ...+++++ +||+.+ | +.|++.++..+|=
T Consensus 142 g~~K~~~l~~~~----~~~~~~i~-iGDg~~-D-~~~a~~Ad~~~ar 181 (214)
T TIGR03333 142 GCCKPSLIRKLS----EPNDYHIV-IGDSVT-D-VEAAKQSDLCFAR 181 (214)
T ss_pred CCCHHHHHHHHh----hcCCcEEE-EeCCHH-H-HHHHHhCCeeEeh
Confidence 346888887654 34566766 999999 9 9999999985553
No 314
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=82.76 E-value=2.3 Score=43.57 Aligned_cols=58 Identities=7% Similarity=-0.032 Sum_probs=44.7
Q ss_pred CCCEEEEEEecCCC----ChhhHHHHHHHHHHHhccCCCCce-EEEEEcCC-------CHHHHHHHHHhCCCC
Q 001557 767 RRKYVFVIAADCDT----TSDFLEIIKKVVEAAGKDNSAGFI-GFVLSTAL-------TILELHSLLVSGGLS 827 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL----~~~i~~~~~~al~~l~~~~~~~gi-~fvIaTGR-------~~~~i~~~l~~l~l~ 827 (1054)
...|.|+||.|.|| ..++++...+.++++++. .+. .++|.|=- ....+..+-+.+|++
T Consensus 39 ~Gik~li~DkDNTL~~~~~~~i~~~~~~~~~~l~~~---~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp 108 (168)
T PF09419_consen 39 KGIKALIFDKDNTLTPPYEDEIPPEYAEWLNELKKQ---FGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP 108 (168)
T ss_pred cCceEEEEcCCCCCCCCCcCcCCHHHHHHHHHHHHH---CCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc
Confidence 34599999999999 477999999999999987 332 35555543 367788888888984
No 315
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=81.70 E-value=9.9 Score=45.78 Aligned_cols=177 Identities=12% Similarity=0.127 Sum_probs=118.9
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCC-CEEeCCC
Q 001557 473 PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYG-QVAYPKH 551 (1054)
Q Consensus 473 ~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~-~V~~~g~ 551 (1054)
.+..++..+-.+ .|=-+..++.+..+.+ .-||-+|++=.-+..- .++++..+..+|+.+ +|.|..-
T Consensus 757 ~d~vvf~~FNqL--yKidP~~l~~W~~ILk--~VPnS~LwllrfPa~g---------e~rf~ty~~~~Gl~p~riifs~v 823 (966)
T KOG4626|consen 757 EDAVVFCNFNQL--YKIDPSTLQMWANILK--RVPNSVLWLLRFPAVG---------EQRFRTYAEQLGLEPDRIIFSPV 823 (966)
T ss_pred CCeEEEeechhh--hcCCHHHHHHHHHHHH--hCCcceeEEEeccccc---------hHHHHHHHHHhCCCccceeeccc
Confidence 333334444433 3433567777777653 3344333332211110 257888899999875 6888887
Q ss_pred CCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcc-------ccCcccceeeCCceEEeCCCCHHHHH
Q 001557 552 HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK-------NGGPVDIHRVLDNGLLVDPHDQQSIA 624 (1054)
Q Consensus 552 ~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~-------~Gg~~eiv~~~~~Gllv~p~d~~~la 624 (1054)
...+|=..-++.| ||++-+++.-|- .|-+|.+.+|+|+|+-. +++. ++...+.|-+| ..+.++..
T Consensus 824 a~k~eHvrr~~La----Dv~LDTplcnGh-TTg~dvLw~GvPmVTmpge~lAsrVa~S--ll~~~Gl~hli-ak~~eEY~ 895 (966)
T KOG4626|consen 824 AAKEEHVRRGQLA----DVCLDTPLCNGH-TTGMDVLWAGVPMVTMPGETLASRVAAS--LLTALGLGHLI-AKNREEYV 895 (966)
T ss_pred cchHHHHHhhhhh----hhcccCcCcCCc-ccchhhhccCCceeecccHHHHHHHHHH--HHHHcccHHHH-hhhHHHHH
Confidence 7778888889999 999998876663 56678999999998744 2221 22222344455 24788888
Q ss_pred HHHHHHHhCHHHHHHHHHHHHHHH-h--cCCHHHHHHHHHHHHHHhhhc
Q 001557 625 DALLKLVSDKQLWERCRQNGLKNI-H--QFSWPEHCKSYLSRISSCKQR 670 (1054)
Q Consensus 625 ~aI~~ll~d~~~~~~~~~~~~~~v-~--~fsw~~~a~~yl~~l~~~~~~ 670 (1054)
+.-.++-+|.+..+.++...+... . .|+-..++..+.+.|.++=..
T Consensus 896 ~iaV~Latd~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~~ 944 (966)
T KOG4626|consen 896 QIAVRLATDKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWKK 944 (966)
T ss_pred HHHHHhhcCHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHHH
Confidence 887888889998888888887765 2 799999999999999876544
No 316
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=81.46 E-value=6.9 Score=48.82 Aligned_cols=53 Identities=8% Similarity=-0.057 Sum_probs=44.5
Q ss_pred CEEEEEEecCCCChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 769 KYVFVIAADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 769 kkLiv~DiDGTL~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
..|.|+-+=|=++ .+.++++++++.+++. ||.|...||-+...+..+.+++|+
T Consensus 571 ~~LtFvGlVGi~D-PPR~ev~~ai~~c~~a----GIrV~mITGD~~~TA~AI~r~iGi 623 (972)
T KOG0202|consen 571 SDLTFVGLVGILD-PPRPEVADAIELCRQA----GIRVIMITGDNKETAEAIAREIGI 623 (972)
T ss_pred cceEEEEEeeccC-CCchhHHHHHHHHHHc----CCEEEEEcCCCHHHHHHHHHHhCC
Confidence 3677766666553 4567889999999986 999999999999999999999997
No 317
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=80.21 E-value=2.4 Score=42.81 Aligned_cols=52 Identities=13% Similarity=0.063 Sum_probs=38.8
Q ss_pred EEEEEEecCCC----Chh------------------hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 770 YVFVIAADCDT----TSD------------------FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 770 kLiv~DiDGTL----~~~------------------i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
|++|+|+|||| ... .-|.+.+.|+.+.+ ...++|.|..+..-+..+++.+.-
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~-----~~ev~i~T~~~~~ya~~v~~~ldp 74 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK-----HYEVVIWTSASEEYAEPVLDALDP 74 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH-----HCEEEEE-SS-HHHHHHHHHHHTT
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH-----hceEEEEEeehhhhhhHHHHhhhh
Confidence 68999999999 111 56788889998865 578889999999999999988763
No 318
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=79.51 E-value=3.8 Score=46.67 Aligned_cols=193 Identities=17% Similarity=0.253 Sum_probs=96.3
Q ss_pred CEEEEEEecCCC--C----hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhC-----------CCCCCCC
Q 001557 769 KYVFVIAADCDT--T----SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSG-----------GLSPLAF 831 (1054)
Q Consensus 769 kkLiv~DiDGTL--~----~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l-----------~l~~~~~ 831 (1054)
=+|+-||=|+|| + ..-++.+...++-|+. |+.|+|+|.=.|.+..++-+.+ .++...-
T Consensus 147 L~LvTFDgDvTLY~DG~sl~~d~pvi~~ii~LL~~-----gv~VgIVTAAGY~~a~kY~~RL~GLL~a~~~~~~Lt~~qk 221 (408)
T PF06437_consen 147 LKLVTFDGDVTLYEDGASLEPDNPVIPRIIKLLRR-----GVKVGIVTAAGYPGAEKYEERLHGLLDAFKDSTDLTPEQK 221 (408)
T ss_pred ceEEEEcCCcccccCCCCCCCCchHHHHHHHHHhc-----CCeEEEEeCCCCCChHHHHHHHHHHHHHHHhccCCCHHHh
Confidence 389999999999 2 2234444445555554 7888898887766655544333 3321000
Q ss_pred c-EEEEcCCcEEE----cCCCCCCCCCCCccccCccchhhhccccChhhHHHHHHHhhhhccCCC-Ccc-Cccccccccc
Q 001557 832 D-AFICNSGSELY----YPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKK-GEE-GKIVEEDESR 904 (1054)
Q Consensus 832 d-~lI~~nGa~I~----~~~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~-~~~-~~~v~~~~~~ 904 (1054)
. .+|. |++-- |.. +....+.++++..|...--..|..+.+..+++.-........ .-+ ...++-.+
T Consensus 222 ~~l~VM--GGEsNYLfr~~~---~~~~~L~~v~~~~W~~~~m~~W~~~dI~~lLD~AE~~L~~~~~~l~Lpa~IiRK~-- 294 (408)
T PF06437_consen 222 SNLYVM--GGESNYLFRYDP---ESPHGLEFVPREEWLLPEMKTWSEEDITELLDIAEAALRDCVKRLNLPATIIRKE-- 294 (408)
T ss_pred cCEEEe--cccceeEEEecC---CCCCCeEEccHHhccCccccCcCHHHHHHHHHHHHHHHHHHHHHcCCCeeEEeec--
Confidence 1 2332 33221 111 001124566778887766678998877776643222111000 000 00010000
Q ss_pred CcceEEEEEecCCCC-C--ccHH----HHHHHHHHhcCeEEEEEe--eCCe--EEEEecCCCCHHHHHHHHHHHh----C
Q 001557 905 STIHCYAFEVTNPQM-I--PPVK----ELRKLMRIQALRCHVIYC--QNGT--KLHVIPVLASRSQALRYLHVRW----G 969 (1054)
Q Consensus 905 ~~~~kis~~~~~~~~-~--~~~~----el~~~l~~~~~~~~v~~s--~~~~--~lEV~p~~asKg~AL~~L~~~~----g 969 (1054)
..+- .+..+.. . ..++ .++..|........+-+| .|+. ++|| .+|.-|++.|..++ +
T Consensus 295 ---RAVG-ivP~~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDI----GdKs~GV~~lQ~y~~~~~~ 366 (408)
T PF06437_consen 295 ---RAVG-IVPKPGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDI----GDKSLGVRALQKYFDPEGG 366 (408)
T ss_pred ---ceee-EecCCCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEc----CCcHHhHHHHHHHHHhccC
Confidence 0000 1111110 0 1122 223444332222222233 2221 4555 58999999999999 9
Q ss_pred CCccCEEEEeCcC
Q 001557 970 IDLSNVVVIAGEC 982 (1054)
Q Consensus 970 I~~e~vvaf~GD~ 982 (1054)
|.+++++= +||.
T Consensus 367 i~~~~tLH-VGDQ 378 (408)
T PF06437_consen 367 IKPSETLH-VGDQ 378 (408)
T ss_pred CCccceee-ehhh
Confidence 99999998 8875
No 319
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=79.08 E-value=13 Score=45.25 Aligned_cols=41 Identities=22% Similarity=0.422 Sum_probs=33.4
Q ss_pred CHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEE-EecC
Q 001557 956 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTV-ILKG 1002 (1054)
Q Consensus 956 sKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gV-aMgN 1002 (1054)
-|++-++-|.++-|.- +.+ +||+|| | .+|++.|+.|| +.|+
T Consensus 768 QKA~v~~llq~~t~kr---vc~-IGDGGN-D-VsMIq~A~~GiGI~gk 809 (1051)
T KOG0210|consen 768 QKAQVVRLLQKKTGKR---VCA-IGDGGN-D-VSMIQAADVGIGIVGK 809 (1051)
T ss_pred HHHHHHHHHHHhhCce---EEE-EcCCCc-c-chheeecccceeeecc
Confidence 6999999999988833 555 999999 9 99999998777 4443
No 320
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=77.53 E-value=3.3 Score=42.96 Aligned_cols=63 Identities=13% Similarity=0.161 Sum_probs=43.3
Q ss_pred CEEEEEEecCCCC------------hhhHHHHHHHHHHHhccCCCCceEEEEEc-----CCCHHH----------HHHHH
Q 001557 769 KYVFVIAADCDTT------------SDFLEIIKKVVEAAGKDNSAGFIGFVLST-----ALTILE----------LHSLL 821 (1054)
Q Consensus 769 kkLiv~DiDGTL~------------~~i~~~~~~al~~l~~~~~~~gi~fvIaT-----GR~~~~----------i~~~l 821 (1054)
.++||+|-|||+. -+..+.+.+++.++++. |..+|++| ||.+.. +...|
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~~----gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l 80 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQRA----GYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKIL 80 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHhC----CCeEEEEECCCCccccCccHHHHHHHHHHHHHHH
Confidence 4899999999992 13567788999999876 88888887 454332 34556
Q ss_pred HhCCCCCCCCcEEEEc
Q 001557 822 VSGGLSPLAFDAFICN 837 (1054)
Q Consensus 822 ~~l~l~~~~~d~lI~~ 837 (1054)
++.|+.. .+.++|-
T Consensus 81 ~~~gv~i--d~i~~Cp 94 (181)
T COG0241 81 ASQGVKI--DGILYCP 94 (181)
T ss_pred HHcCCcc--ceEEECC
Confidence 6667532 2355553
No 321
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=77.42 E-value=26 Score=36.67 Aligned_cols=135 Identities=16% Similarity=0.155 Sum_probs=57.4
Q ss_pred CcHhHHHHHHHHHHhcC-CCceEEEEEecCcCCCCCCCccCCcccccccccccccccccCCCCCeEEEEccCCCCCcccc
Q 001557 191 GGQVKYVVELARALGSM-PGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQ 269 (1054)
Q Consensus 191 GG~~~~v~eLa~aLa~~-~Gv~~V~vvt~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~ 269 (1054)
-|-...+..|+++|.+. || +.|.|-|.... ++......+ .+.+.+..+|+.-
T Consensus 31 vGE~~a~~~Li~~l~~~~p~-~~illT~~T~t------g~~~~~~~~--------------~~~v~~~~~P~D~------ 83 (186)
T PF04413_consen 31 VGEVNAARPLIKRLRKQRPD-LRILLTTTTPT------GREMARKLL--------------PDRVDVQYLPLDF------ 83 (186)
T ss_dssp HHHHHHHHHHHHHHTT---T-S-EEEEES-CC------HHHHHHGG---------------GGG-SEEE---SS------
T ss_pred HHHHHHHHHHHHHHHHhCCC-CeEEEEecCCc------hHHHHHHhC--------------CCCeEEEEeCccC------
Confidence 37888999999999986 77 66666654311 000000000 1244455566421
Q ss_pred cccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccchHHHHHH
Q 001557 270 KELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLK 349 (1054)
Q Consensus 270 k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~ 349 (1054)
+..+..++.++ +||++.......-.--...++..|||+++.---+......
T Consensus 84 --------~~~~~rfl~~~-----------------~P~~~i~~EtElWPnll~~a~~~~ip~~LvNarls~~s~~---- 134 (186)
T PF04413_consen 84 --------PWAVRRFLDHW-----------------RPDLLIWVETELWPNLLREAKRRGIPVVLVNARLSERSFR---- 134 (186)
T ss_dssp --------HHHHHHHHHHH-------------------SEEEEES----HHHHHH-----S-EEEEEE------------
T ss_pred --------HHHHHHHHHHh-----------------CCCEEEEEccccCHHHHHHHhhcCCCEEEEeeeeccccch----
Confidence 23334444443 3898877654222222334566799987643322211111
Q ss_pred hCCCChhhhhhHhHHHHHHHHHHhhhccCCEEEecCHHHHHHHHh
Q 001557 350 QGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWR 394 (1054)
Q Consensus 350 ~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~ 394 (1054)
.|+..+. .-+..++..|.|++.|+..++.+..
T Consensus 135 -----------~~~~~~~--~~r~~l~~f~~i~aqs~~da~r~~~ 166 (186)
T PF04413_consen 135 -----------RYRRFPF--LFRPLLSRFDRILAQSEADAERFRK 166 (186)
T ss_dssp -----------------H--HHHHHGGG-SEEEESSHHHHHHHHT
T ss_pred -----------hhhhhHH--HHHHHHHhCCEEEECCHHHHHHHHH
Confidence 1111111 1334689999999999988876543
No 322
>PLN03004 UDP-glycosyltransferase
Probab=77.22 E-value=5.7 Score=47.51 Aligned_cols=142 Identities=10% Similarity=0.144 Sum_probs=80.0
Q ss_pred CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHH-HHHHHHHHHHHcCCCCCEEeCC
Q 001557 474 RKPMILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAA-LLLSILKLIDKYDLYGQVAYPK 550 (1054)
Q Consensus 474 ~~~~Il~vgRld--~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~-~~~~i~~l~~~~~l~~~V~~~g 550 (1054)
+.-+++++|... +.+-+..+..+++.+. . .+..++......+.-...... +-..+. ++.. ...+.+.+
T Consensus 270 ~sVvyvsfGS~~~~~~~q~~ela~gL~~s~----~-~FlW~~r~~~~~~~~~~~~~~~lp~gf~---er~~-~~g~~v~~ 340 (451)
T PLN03004 270 KSVVFLCFGSLGLFSKEQVIEIAVGLEKSG----Q-RFLWVVRNPPELEKTELDLKSLLPEGFL---SRTE-DKGMVVKS 340 (451)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHCC----C-CEEEEEcCCccccccccchhhhCChHHH---Hhcc-CCcEEEEe
Confidence 456677888874 3445666777777663 2 444455432100000000000 001111 1211 13577788
Q ss_pred CCCCCcHHHHHHHhhcCCcE--EEecCCCCCCcHHHHHHHHcCCCEEEccccCcc----ccee-eCCceEEeCC-----C
Q 001557 551 HHKQSDVPDIYRLAAKTKGV--FINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV----DIHR-VLDNGLLVDP-----H 618 (1054)
Q Consensus 551 ~~~~~dl~~ly~~Aa~~~dv--~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~----eiv~-~~~~Gllv~p-----~ 618 (1054)
++|+.+ +++.+ ++ || + -+--.+++||+++|+|+|+-...+=. ..+. ..+.|+.++. -
T Consensus 341 W~PQ~~---iL~H~----~v~~Fv--T--H~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~ 409 (451)
T PLN03004 341 WAPQVP---VLNHK----AVGGFV--T--HCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGFV 409 (451)
T ss_pred eCCHHH---HhCCC----ccceEe--c--cCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCcc
Confidence 888875 56666 55 44 2 12235889999999999998754322 2232 2356877752 3
Q ss_pred CHHHHHHHHHHHHhCHH
Q 001557 619 DQQSIADALLKLVSDKQ 635 (1054)
Q Consensus 619 d~~~la~aI~~ll~d~~ 635 (1054)
+.++++++|++++.++.
T Consensus 410 ~~e~l~~av~~vm~~~~ 426 (451)
T PLN03004 410 SSTEVEKRVQEIIGECP 426 (451)
T ss_pred CHHHHHHHHHHHhcCHH
Confidence 78999999999998744
No 323
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=77.13 E-value=1.1e+02 Score=34.18 Aligned_cols=101 Identities=23% Similarity=0.216 Sum_probs=54.9
Q ss_pred CcEEEEEeCCC---CCCCHHHHHHHHHhcccccCCCcEEEEEec-CCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCC
Q 001557 475 KPMILALARPD---PKKNITTLVKAFGECRPLRELANLTLIMGN-RDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPK 550 (1054)
Q Consensus 475 ~~~Il~vgRld---~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~-~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g 550 (1054)
++.|+..-|.. ..+.+..+.+++..+.+. ...++.++-.. ..| ......+...+.-...+. .
T Consensus 172 ~~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~-~g~~v~~i~~~~~~D-----------~~~~~~l~~~~~~~~~i~--~ 237 (298)
T TIGR03609 172 EPVIVVSLRPWPLLDVSRLLRLLRALDRLQRD-TGAFVLFLPFQQPQD-----------LPLARALRDQLLGPAEVL--S 237 (298)
T ss_pred CCeEEEEECCCCcCCHHHHHHHHHHHHHHHHh-hCCeEEEEeCCcchh-----------HHHHHHHHHhcCCCcEEE--e
Confidence 44555444432 122355677777776432 23344333222 122 122233334433223332 4
Q ss_pred CCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcc
Q 001557 551 HHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK 598 (1054)
Q Consensus 551 ~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~ 598 (1054)
..+.+++..+++.| +++|-..+ -.++=|+.+|+|+|+-.
T Consensus 238 ~~~~~e~~~~i~~~----~~vI~~Rl-----H~~I~A~~~gvP~i~i~ 276 (298)
T TIGR03609 238 PLDPEELLGLFASA----RLVIGMRL-----HALILAAAAGVPFVALS 276 (298)
T ss_pred cCCHHHHHHHHhhC----CEEEEech-----HHHHHHHHcCCCEEEee
Confidence 45667888999999 88885543 35788999999999753
No 324
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=76.32 E-value=4.9 Score=37.18 Aligned_cols=80 Identities=20% Similarity=0.293 Sum_probs=55.5
Q ss_pred EEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEe--CCCCCCCc--HHHHHHHhhcCCcEEEecCCC---CCCcHH
Q 001557 511 LIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAY--PKHHKQSD--VPDIYRLAAKTKGVFINPAFI---EPFGLT 583 (1054)
Q Consensus 511 LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~--~g~~~~~d--l~~ly~~Aa~~~dv~v~ps~~---Egfgl~ 583 (1054)
||+|+.++ ....+...++++|..- +.+ .+...... ++.....| |++|++.-. ..+..+
T Consensus 3 liVGG~~~----------~~~~~~~~~~~~G~~~-~~hg~~~~~~~~~~~l~~~i~~a----D~VIv~t~~vsH~~~~~v 67 (97)
T PF10087_consen 3 LIVGGRED----------RERRYKRILEKYGGKL-IHHGRDGGDEKKASRLPSKIKKA----DLVIVFTDYVSHNAMWKV 67 (97)
T ss_pred EEEcCCcc----------cHHHHHHHHHHcCCEE-EEEecCCCCccchhHHHHhcCCC----CEEEEEeCCcChHHHHHH
Confidence 67788554 2567888888888542 333 24444444 88888888 999888643 345556
Q ss_pred HHHHHHcCCCEEEccccCcccc
Q 001557 584 LIEAAAYGLPIVATKNGGPVDI 605 (1054)
Q Consensus 584 l~EAmA~G~PVIat~~Gg~~ei 605 (1054)
--+|-..|+|++.+...|...+
T Consensus 68 k~~akk~~ip~~~~~~~~~~~l 89 (97)
T PF10087_consen 68 KKAAKKYGIPIIYSRSRGVSSL 89 (97)
T ss_pred HHHHHHcCCcEEEECCCCHHHH
Confidence 6677888999999997776555
No 325
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=75.61 E-value=5.4 Score=40.89 Aligned_cols=38 Identities=16% Similarity=-0.044 Sum_probs=25.1
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCC
Q 001557 784 FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGG 825 (1054)
Q Consensus 784 i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~ 825 (1054)
+.|..++.+++++++ ++.|++.||=+-..+..+++.+.
T Consensus 74 Idp~fKef~e~ike~----di~fiVvSsGm~~fI~~lfe~iv 111 (220)
T COG4359 74 IDPGFKEFVEWIKEH----DIPFIVVSSGMDPFIYPLFEGIV 111 (220)
T ss_pred cCccHHHHHHHHHHc----CCCEEEEeCCCchHHHHHHHhhc
Confidence 445566777777776 66655555555556778887765
No 326
>COG4996 Predicted phosphatase [General function prediction only]
Probab=74.20 E-value=6 Score=38.25 Aligned_cols=40 Identities=13% Similarity=-0.113 Sum_probs=33.1
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 784 FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 784 i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
+-+..++.++.+++. |..+..+|=.-..-+.+.+..+++.
T Consensus 42 L~~~v~~~l~warns----G~i~~~~sWN~~~kA~~aLral~~~ 81 (164)
T COG4996 42 LFPDVKETLKWARNS----GYILGLASWNFEDKAIKALRALDLL 81 (164)
T ss_pred EcHHHHHHHHHHHhC----CcEEEEeecCchHHHHHHHHHhchh
Confidence 456788889998885 7788899988888888889888874
No 327
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=73.51 E-value=1.8 Score=49.64 Aligned_cols=70 Identities=16% Similarity=-0.002 Sum_probs=45.0
Q ss_pred cccCCCEEEEEEecCCCChh--------------hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCC
Q 001557 764 ALRRRKYVFVIAADCDTTSD--------------FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPL 829 (1054)
Q Consensus 764 ~~~~~kkLiv~DiDGTL~~~--------------i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~ 829 (1054)
..+..++++++|||||+|+. ....+....-...++ |..+..-|.|++..+..-..-+
T Consensus 370 vwr~n~kiVVsDiDGTITkSD~~Ghv~~miGkdwth~gVAkLYtdI~rN----GYkI~YltsR~~Gqa~sTrsyl----- 440 (580)
T COG5083 370 VWRNNKKIVVSDIDGTITKSDALGHVKQMIGKDWTHNGVAKLYTDIDRN----GYKIKYLTSRSYGQADSTRSYL----- 440 (580)
T ss_pred EEeCCCcEEEEecCCcEEehhhHHHHHHHhccchhhcchhhhhhhhccC----ceEEEEEecccccchhhhhhHH-----
Confidence 34567899999999999421 122223333344444 8899999999987654333222
Q ss_pred CCcEEEEcCCcEEEcC
Q 001557 830 AFDAFICNSGSELYYP 845 (1054)
Q Consensus 830 ~~d~lI~~nGa~I~~~ 845 (1054)
..||.||..+...
T Consensus 441 ---rnieQngykLpdg 453 (580)
T COG5083 441 ---RNIEQNGYKLPDG 453 (580)
T ss_pred ---HhhhhcCccCCCC
Confidence 2578888887765
No 328
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=72.40 E-value=7.6 Score=40.90 Aligned_cols=58 Identities=14% Similarity=0.112 Sum_probs=45.0
Q ss_pred cccCCCEEEEEEecCCCC-h---------hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 764 ALRRRKYVFVIAADCDTT-S---------DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 764 ~~~~~kkLiv~DiDGTL~-~---------~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
..+..||++|+|+|+||- . -.-|-+.+.|+.+.+ ...++|=|..+..-+...+.++++
T Consensus 16 ~~~~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~-----~feIvVwTAa~~~ya~~~l~~l~~ 83 (195)
T TIGR02245 16 PPREGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYE-----DYDIVIWSATSMKWIEIKMTELGV 83 (195)
T ss_pred CCCCCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHh-----CCEEEEEecCCHHHHHHHHHHhcc
Confidence 335677999999999992 1 245677888888886 467888888888888899998876
No 329
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=72.18 E-value=12 Score=38.00 Aligned_cols=57 Identities=18% Similarity=0.139 Sum_probs=38.7
Q ss_pred ccCCCEEEEEEecCCC---C--hh---------------------------------hHHHHHHHHHHHhccCCCCceEE
Q 001557 765 LRRRKYVFVIAADCDT---T--SD---------------------------------FLEIIKKVVEAAGKDNSAGFIGF 806 (1054)
Q Consensus 765 ~~~~kkLiv~DiDGTL---~--~~---------------------------------i~~~~~~al~~l~~~~~~~gi~f 806 (1054)
++.+|+.+|+|+|.|| + .. +-|.+.+.|+.+.+ +..+
T Consensus 2 ~~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~-----~yel 76 (156)
T TIGR02250 2 LREKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASK-----LYEM 76 (156)
T ss_pred CcCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHh-----hcEE
Confidence 4578899999999999 1 10 12355666666663 4667
Q ss_pred EEEcCCCHHHHHHHHHhCCC
Q 001557 807 VLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 807 vIaTGR~~~~i~~~l~~l~l 826 (1054)
+|.|.-+...+..+++.++.
T Consensus 77 ~I~T~~~~~yA~~vl~~ldp 96 (156)
T TIGR02250 77 HVYTMGTRAYAQAIAKLIDP 96 (156)
T ss_pred EEEeCCcHHHHHHHHHHhCc
Confidence 77777777777777777654
No 330
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=72.01 E-value=28 Score=38.50 Aligned_cols=123 Identities=11% Similarity=0.102 Sum_probs=69.8
Q ss_pred CCCCcEEEEEeCCCCC-------CCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHc-CCC
Q 001557 472 NPRKPMILALARPDPK-------KNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKY-DLY 543 (1054)
Q Consensus 472 ~~~~~~Il~vgRld~~-------Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~-~l~ 543 (1054)
..++++|++....... .+....++.+..+.+.. |+..+++-..|....... . ....+. ...
T Consensus 114 ~~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~--p~~~lvvK~HP~~~~~~~--~-------~~~~~~~~~~ 182 (269)
T PF05159_consen 114 SKNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKEN--PDAKLVVKPHPDERGGNK--Y-------SYLEELPNLP 182 (269)
T ss_pred cCCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHC--CCCEEEEEECchhhCCCC--h-------hHhhhhhcCC
Confidence 3567778877766543 24455666666664333 366667755552111100 0 222232 233
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeCCceEEeCCCCHHHH
Q 001557 544 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSI 623 (1054)
Q Consensus 544 ~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~Gllv~p~d~~~l 623 (1054)
+.+.+.. .-.+.+++..| |.++.-+ +.+.+||+.+|+||++-...-.. ..|+..+....+.+
T Consensus 183 ~~~~~~~---~~~~~~Ll~~s----~~Vvtin-----StvGlEAll~gkpVi~~G~~~Y~------~~glt~~~~~~~~~ 244 (269)
T PF05159_consen 183 NVVIIDD---DVNLYELLEQS----DAVVTIN-----STVGLEALLHGKPVIVFGRAFYA------GWGLTDDRKLDEFW 244 (269)
T ss_pred CeEEECC---CCCHHHHHHhC----CEEEEEC-----CHHHHHHHHcCCceEEecCcccC------CCCccCcCCchhhh
Confidence 3344433 35788999999 6665432 68999999999999996543221 34666654444333
No 331
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=71.18 E-value=25 Score=42.29 Aligned_cols=86 Identities=13% Similarity=0.158 Sum_probs=57.5
Q ss_pred CCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCC-CEEEccc--cCcccceeeCCceEEeCCCCHHHHHHHHHHH
Q 001557 554 QSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGL-PIVATKN--GGPVDIHRVLDNGLLVDPHDQQSIADALLKL 630 (1054)
Q Consensus 554 ~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~-PVIat~~--Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~l 630 (1054)
...+.+.++.+ -++|.|+-.++..-.++||+.+|| |||.++. ....+.+.-..-++.++ .+++-..|.+.
T Consensus 334 ~~~y~~~m~~S----~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~---~~~v~~~~~~i 406 (464)
T KOG1021|consen 334 PLNYMEGMQDS----KFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVP---EKDVPELIKNI 406 (464)
T ss_pred cchHHHHhhcC----eEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEE---HHHhhhHHHHH
Confidence 46788999999 899999999999999999999996 9999885 34445444344566664 33443334555
Q ss_pred Hh--CHHHHHHHHHHHHH
Q 001557 631 VS--DKQLWERCRQNGLK 646 (1054)
Q Consensus 631 l~--d~~~~~~~~~~~~~ 646 (1054)
|. ...+..+|+++..+
T Consensus 407 L~~i~~~~~~~m~~~v~~ 424 (464)
T KOG1021|consen 407 LLSIPEEEVLRMRENVIR 424 (464)
T ss_pred HHhcCHHHHHHHHHHHHH
Confidence 54 23333445554443
No 332
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=68.46 E-value=7.4 Score=47.15 Aligned_cols=69 Identities=13% Similarity=0.035 Sum_probs=47.1
Q ss_pred CCEEEEEEecCCCC--------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHH---HHHHHhCCCCCCC
Q 001557 768 RKYVFVIAADCDTT--------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILEL---HSLLVSGGLSPLA 830 (1054)
Q Consensus 768 ~kkLiv~DiDGTL~--------------~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i---~~~l~~l~l~~~~ 830 (1054)
..|+|+.|||||.| .--...+.+...++.++ |.+|+++|.|++..+ +.+|..+.-
T Consensus 529 n~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~Ik~N----GYk~lyLSARaIgQA~~TR~yL~nv~Q---- 600 (738)
T KOG2116|consen 529 NDKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKIKEN----GYKILYLSARAIGQADSTRQYLKNVEQ---- 600 (738)
T ss_pred CCcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHHHhC----CeeEEEEehhhhhhhHHHHHHHHHHhh----
Confidence 56999999999993 12344566777788887 999999999988654 456665432
Q ss_pred CcEEEEcCCcEEEcC
Q 001557 831 FDAFICNSGSELYYP 845 (1054)
Q Consensus 831 ~d~lI~~nGa~I~~~ 845 (1054)
|+.+--.|=.|.-+
T Consensus 601 -dG~~LPdGPViLSP 614 (738)
T KOG2116|consen 601 -DGKKLPDGPVILSP 614 (738)
T ss_pred -cCccCCCCCEEeCC
Confidence 33444455555544
No 333
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=63.10 E-value=45 Score=34.36 Aligned_cols=63 Identities=17% Similarity=0.135 Sum_probs=38.9
Q ss_pred CcceEEEEcCCCchHHHHHHHccC------CCCEEEEeCCCccchHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccC
Q 001557 305 IWPVAIHGHYADAGDAAALLSGAL------NVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDAS 378 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~a~~l~~~~------~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~a 378 (1054)
.+||+|.++.+..+....++++.+ +.++|+-- ++.+-+- ...+-++ ++.-|
T Consensus 91 ~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIE-S~aRv~~-------------lSlTGkl---------ly~~a 147 (170)
T PF08660_consen 91 ERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIE-SFARVKT-------------LSLTGKL---------LYPFA 147 (170)
T ss_pred hCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEE-eeeecCC-------------CchHHHH---------HHHhC
Confidence 469999999987777666666666 78877632 2211110 0111222 34569
Q ss_pred CEEEecCHHHHH
Q 001557 379 EIVITSTRQEIE 390 (1054)
Q Consensus 379 d~Vi~~S~~~~~ 390 (1054)
|.+++.-++.++
T Consensus 148 D~f~VQW~~l~~ 159 (170)
T PF08660_consen 148 DRFIVQWEELAE 159 (170)
T ss_pred CEEEEcCHHHHh
Confidence 999998886554
No 334
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=60.37 E-value=8.2 Score=43.22 Aligned_cols=70 Identities=20% Similarity=0.207 Sum_probs=49.0
Q ss_pred CcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCC-CEEEccc--cCcccceeeCCceEEeCCCCHHHHHHHHH
Q 001557 555 SDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGL-PIVATKN--GGPVDIHRVLDNGLLVDPHDQQSIADALL 628 (1054)
Q Consensus 555 ~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~-PVIat~~--Gg~~eiv~~~~~Gllv~p~d~~~la~aI~ 628 (1054)
.+..+.|+.+ .+++.|.-..++..-++|||++|| |||.++. =...|++.=..-.+.|++.+..+|-+.|+
T Consensus 228 ~~~~~~l~~S----~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL~ 300 (302)
T PF03016_consen 228 SEYMELLRNS----KFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEILR 300 (302)
T ss_pred hHHHHhcccC----eEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHHh
Confidence 4577888888 888887766668899999999996 8887662 34445553344567777666655555543
No 335
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=60.33 E-value=16 Score=37.28 Aligned_cols=53 Identities=17% Similarity=0.028 Sum_probs=41.0
Q ss_pred CEEEEEEecCCC--C---h----------------------hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHH
Q 001557 769 KYVFVIAADCDT--T---S----------------------DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLL 821 (1054)
Q Consensus 769 kkLiv~DiDGTL--~---~----------------------~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l 821 (1054)
|+.+|+|+|+|| + . ..-+.+.+.|+.+.+ ...++|.|.-+...+..++
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~-----~yei~I~Ts~~~~yA~~il 75 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSK-----WYELVIFTASLEEYADPVL 75 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHh-----cCEEEEEcCCcHHHHHHHH
Confidence 478999999999 1 1 134567888998876 3678888888888888999
Q ss_pred HhCCC
Q 001557 822 VSGGL 826 (1054)
Q Consensus 822 ~~l~l 826 (1054)
+.++.
T Consensus 76 ~~ldp 80 (162)
T TIGR02251 76 DILDR 80 (162)
T ss_pred HHHCc
Confidence 88775
No 336
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=60.03 E-value=8.5 Score=40.25 Aligned_cols=37 Identities=14% Similarity=-0.079 Sum_probs=23.7
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEcCCCHH-------HHHHHHHhC
Q 001557 784 FLEIIKKVVEAAGKDNSAGFIGFVLSTALTIL-------ELHSLLVSG 824 (1054)
Q Consensus 784 i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~-------~i~~~l~~l 824 (1054)
+.+...++|++|.+. |..+++.|+|+.. ...+|+++.
T Consensus 74 p~~gA~e~l~~L~~~----g~~~~~Itar~~~~~~~~~~~k~~Wl~~h 117 (191)
T PF06941_consen 74 PIPGAVEALKKLRDK----GHEIVIITARPPEFPDHSAEEKREWLERH 117 (191)
T ss_dssp B-TTHHHHHHHHHTS----TTEEEEEEE-SSSSGCCCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHc----CCcEEEEEecCccccchHHHHHHHHHHHH
Confidence 445667888888876 6556667777543 556777775
No 337
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=59.78 E-value=11 Score=39.40 Aligned_cols=41 Identities=10% Similarity=-0.010 Sum_probs=38.3
Q ss_pred hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 782 SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 782 ~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
..+.+.+.++|+.|++. |+.++++||-+...+..+.+.+|+
T Consensus 126 d~~~~~~~~~l~~L~~~----Gi~~~i~TGD~~~~a~~~~~~lgi 166 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEA----GIKVAILTGDNESTASAIAKQLGI 166 (215)
T ss_dssp EEBHTTHHHHHHHHHHT----TEEEEEEESSEHHHHHHHHHHTTS
T ss_pred Ccchhhhhhhhhhhhcc----Ccceeeeecccccccccccccccc
Confidence 56788899999999997 999999999999999999999998
No 338
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=58.88 E-value=8 Score=33.71 Aligned_cols=44 Identities=23% Similarity=0.194 Sum_probs=34.7
Q ss_pred HHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcce-EEEecCcc
Q 001557 959 QALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHK-TVILKGVG 1004 (1054)
Q Consensus 959 ~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~-gVaMgNa~ 1004 (1054)
..+...+++++++++++++ +||+-.|| +.+=..+|. +|.+..+.
T Consensus 8 ~~~~~a~~~~~~~~~~~~~-VGD~~~~D-i~~a~~~G~~~ilV~tG~ 52 (75)
T PF13242_consen 8 GMLEQALKRLGVDPSRCVM-VGDSLETD-IEAAKAAGIDTILVLTGV 52 (75)
T ss_dssp HHHHHHHHHHTSGGGGEEE-EESSTTTH-HHHHHHTTSEEEEESSSS
T ss_pred HHHHHHHHHcCCCHHHEEE-EcCCcHhH-HHHHHHcCCcEEEECCCC
Confidence 4577888999999999999 99994448 888888884 66676655
No 339
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=57.51 E-value=61 Score=33.04 Aligned_cols=61 Identities=16% Similarity=0.121 Sum_probs=38.0
Q ss_pred CcceEEEEcCCCchHH-HH-HH-HccC-CCCEEEEeCCCcc-chHHHHHHhCCCChhhhhhHhHHHHHHHHHHhhhccCC
Q 001557 305 IWPVAIHGHYADAGDA-AA-LL-SGAL-NVPMVFTGHSLGR-DKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASE 379 (1054)
Q Consensus 305 ~~pDVIh~h~~~a~~~-a~-~l-~~~~-~iP~V~t~H~l~~-~~~~~l~~~g~~~~~~i~~~~~~~~ri~~E~~~l~~ad 379 (1054)
.+||+|.|.++.+..+ .. +. .+.+ ++|++..+-|+.. +. .+.-..+|
T Consensus 88 ~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~~~H~----------------------------~W~~~~~D 139 (169)
T PF06925_consen 88 FQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFDTVHP----------------------------FWIHPGVD 139 (169)
T ss_pred cCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCCCCCc----------------------------CeecCCCC
Confidence 6799999988754444 33 22 2334 6887654444421 21 01356899
Q ss_pred EEEecCHHHHHHHH
Q 001557 380 IVITSTRQEIEEQW 393 (1054)
Q Consensus 380 ~Vi~~S~~~~~~~~ 393 (1054)
..++.|++..+++.
T Consensus 140 ~y~Vase~~~~~l~ 153 (169)
T PF06925_consen 140 RYFVASEEVKEELI 153 (169)
T ss_pred EEEECCHHHHHHHH
Confidence 99999998777654
No 340
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=57.39 E-value=17 Score=37.97 Aligned_cols=45 Identities=18% Similarity=0.200 Sum_probs=36.4
Q ss_pred HHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEc
Q 001557 788 IKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 837 (1054)
Q Consensus 788 ~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~ 837 (1054)
..++|+.|+++ |+.++|+||.+...+..+++.+|+. .-||.++++
T Consensus 111 ~~~~L~~l~~~----g~~~~i~T~~~~~~~~~~l~~~gl~-~~f~~~~~~ 155 (197)
T TIGR01548 111 PKGLLRELHRA----PKGMAVVTGRPRKDAAKFLTTHGLE-ILFPVQIWM 155 (197)
T ss_pred HHHHHHHHHHc----CCcEEEECCCCHHHHHHHHHHcCch-hhCCEEEee
Confidence 37778888775 8999999999999999999999985 345656553
No 341
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=56.95 E-value=9.5 Score=39.38 Aligned_cols=40 Identities=8% Similarity=-0.026 Sum_probs=31.9
Q ss_pred CHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEE
Q 001557 956 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTV 998 (1054)
Q Consensus 956 sKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gV 998 (1054)
-+-..+.+.++++|++++++++ +||+-. | ++.=..+|..+
T Consensus 143 P~p~~~~~~~~~~~~~~~~~l~-igDs~~-d-i~aA~~aG~~~ 182 (188)
T PRK10725 143 PAPDTFLRCAQLMGVQPTQCVV-FEDADF-G-IQAARAAGMDA 182 (188)
T ss_pred CChHHHHHHHHHcCCCHHHeEE-EeccHh-h-HHHHHHCCCEE
Confidence 3556799999999999999998 788877 8 77666666543
No 342
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=56.53 E-value=11 Score=41.23 Aligned_cols=41 Identities=5% Similarity=-0.120 Sum_probs=33.8
Q ss_pred CHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEE
Q 001557 956 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVI 999 (1054)
Q Consensus 956 sKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVa 999 (1054)
-+...+.+.++++|++++++++ +||+.. | +..=+.+|.-++
T Consensus 165 P~p~~~~~a~~~~~~~~~~~l~-vgDs~~-D-i~aA~~aGi~~i 205 (248)
T PLN02770 165 PHPDPYLKALEVLKVSKDHTFV-FEDSVS-G-IKAGVAAGMPVV 205 (248)
T ss_pred CChHHHHHHHHHhCCChhHEEE-EcCCHH-H-HHHHHHCCCEEE
Confidence 3457788999999999999988 999888 8 888788886554
No 343
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=56.43 E-value=31 Score=41.38 Aligned_cols=48 Identities=8% Similarity=0.021 Sum_probs=33.8
Q ss_pred HHhhhccCCEEEecCHHHHHHHHhhhcCCChHHHHHHHHhHhcccccCCCCCCcEEEeCCCCcCCCccc
Q 001557 371 EELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVR 439 (1054)
Q Consensus 371 E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~r~~~gv~~~g~~~~rv~vIPnGID~~~f~~ 439 (1054)
|......++.+++.+......+......... ..+.+..++||.+.+.+
T Consensus 203 e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~---------------------~d~~~~y~ei~~s~~~~ 250 (495)
T KOG0853|consen 203 EEETTGLAWKILVNSYFTKRQFKATFVSLSN---------------------SDITSTYPEIDGSWFTY 250 (495)
T ss_pred hhhhhhccceEecchhhhhhhhhhhhhhcCC---------------------CCcceeeccccchhccc
Confidence 4557888999999988776665444433222 14788899999888875
No 344
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=55.03 E-value=18 Score=39.48 Aligned_cols=49 Identities=20% Similarity=0.045 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcC
Q 001557 785 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNS 838 (1054)
Q Consensus 785 ~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~n 838 (1054)
-+.+.+.|+.|+++ |+.++|+|+.+...+...++.+++. .-||.+||+.
T Consensus 110 ~pgv~e~L~~L~~~----g~~l~I~Tn~~~~~~~~~l~~~gl~-~~Fd~iv~~~ 158 (248)
T PLN02770 110 LNGLYKLKKWIEDR----GLKRAAVTNAPRENAELMISLLGLS-DFFQAVIIGS 158 (248)
T ss_pred CccHHHHHHHHHHc----CCeEEEEeCCCHHHHHHHHHHcCCh-hhCcEEEecC
Confidence 34567788888886 8999999999999999999999985 3467777754
No 345
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=54.07 E-value=17 Score=38.88 Aligned_cols=47 Identities=23% Similarity=0.182 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEE
Q 001557 785 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFIC 836 (1054)
Q Consensus 785 ~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~ 836 (1054)
-+.++++|..|++. |+.++|+|+++...+..+++.+|+. .-|+.++|
T Consensus 91 ~~gv~e~L~~L~~~----g~~l~i~T~k~~~~~~~~l~~~gl~-~~F~~i~g 137 (220)
T COG0546 91 FPGVKELLAALKSA----GYKLGIVTNKPERELDILLKALGLA-DYFDVIVG 137 (220)
T ss_pred CCCHHHHHHHHHhC----CCeEEEEeCCcHHHHHHHHHHhCCc-cccceEEc
Confidence 44568889999987 8999999999999999999999985 34555544
No 346
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=53.36 E-value=21 Score=45.50 Aligned_cols=43 Identities=21% Similarity=0.249 Sum_probs=39.0
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 781 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 781 ~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
.+++.+.++..|+.|.+. +|..|.|||-++..+....+++|+-
T Consensus 703 eNkLK~~T~~VI~eL~~A----nIRtVMcTGDNllTaisVakeCgmi 745 (1140)
T KOG0208|consen 703 ENKLKEETKRVIDELNRA----NIRTVMCTGDNLLTAISVAKECGMI 745 (1140)
T ss_pred ecccccccHHHHHHHHhh----cceEEEEcCCchheeeehhhccccc
Confidence 477888999999999986 8999999999999999999999983
No 347
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=52.94 E-value=51 Score=36.51 Aligned_cols=100 Identities=15% Similarity=0.124 Sum_probs=59.3
Q ss_pred EEEEEeCCCCCCC--HHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCC
Q 001557 477 MILALARPDPKKN--ITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQ 554 (1054)
Q Consensus 477 ~Il~vgRld~~Kg--i~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~ 554 (1054)
+++..|.-.+.|. .+...+.++.+... ..++ +++|+.++ ......+.+.++-...+.+.+..+-
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~--~~~i-vl~g~~~e-----------~~~~~~i~~~~~~~~~~~~~~~~~l 189 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLAR--GARV-VLTGGPAE-----------RELAEEIAAALGGPRVVNLAGKTSL 189 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHC--CCEE-EEEechhh-----------HHHHHHHHHhcCCCccccCcCCCCH
Confidence 4455555455554 45777777777532 3444 34555443 1222333333322234556777777
Q ss_pred CcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccc
Q 001557 555 SDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN 599 (1054)
Q Consensus 555 ~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~ 599 (1054)
.++.++++.| |++|-+. . |.. --|.|.|+|+|+--.
T Consensus 190 ~e~~~li~~~----~l~I~~D---s-g~~-HlA~a~~~p~i~l~g 225 (279)
T cd03789 190 RELAALLARA----DLVVTND---S-GPM-HLAAALGTPTVALFG 225 (279)
T ss_pred HHHHHHHHhC----CEEEeeC---C-HHH-HHHHHcCCCEEEEEC
Confidence 8999999999 9999773 2 333 344699999988654
No 348
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=52.89 E-value=7.1 Score=41.01 Aligned_cols=33 Identities=12% Similarity=0.131 Sum_probs=28.3
Q ss_pred HHHHHHHHhCCCccCEEEEeCcCCCccccccccCcc
Q 001557 960 ALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVH 995 (1054)
Q Consensus 960 AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag 995 (1054)
.+..+++.+++++++|++ +||+-| | ..|++.||
T Consensus 183 ~~~~~i~~l~~~~~~v~~-vGDg~n-D-~~al~~Ag 215 (215)
T PF00702_consen 183 IFLRIIKELQVKPGEVAM-VGDGVN-D-APALKAAG 215 (215)
T ss_dssp HHHHHHHHHTCTGGGEEE-EESSGG-H-HHHHHHSS
T ss_pred hHHHHHHHHhcCCCEEEE-EccCHH-H-HHHHHhCc
Confidence 668888999999997777 888888 9 99998875
No 349
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=52.83 E-value=27 Score=42.34 Aligned_cols=152 Identities=17% Similarity=0.153 Sum_probs=93.3
Q ss_pred CCcEEEEEeCCC-CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCC
Q 001557 474 RKPMILALARPD-PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHH 552 (1054)
Q Consensus 474 ~~~~Il~vgRld-~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~ 552 (1054)
.+++.+..|.-+ ..||-+..++++.... . |.|++.+... ....+...|.=+|.+
T Consensus 276 r~~~AlVyGK~~~~w~~k~~~l~~l~~~~------e---ih~tV~~~~~----------------~~~~~P~~V~NHG~l 330 (559)
T PF15024_consen 276 RKNQALVYGKERYMWKGKEKYLDVLHKYM------E---IHGTVYDEPQ----------------RPPNVPSFVKNHGIL 330 (559)
T ss_pred ccceeEEEccchhhhcCcHHHHHHHHhhc------E---EEEEeccCCC----------------CCcccchhhhhcCcC
Confidence 345566667655 3677788888776652 2 2233322111 011122346668888
Q ss_pred CCCcHHHHHHHhhcCCcEEEecCC-CCCCcHHHHHHHHcCCCEEEccccCccc---------------cee---------
Q 001557 553 KQSDVPDIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAYGLPIVATKNGGPVD---------------IHR--------- 607 (1054)
Q Consensus 553 ~~~dl~~ly~~Aa~~~dv~v~ps~-~Egfgl~l~EAmA~G~PVIat~~Gg~~e---------------iv~--------- 607 (1054)
+..|+..+++.| -|||=.-. +| |=+.+||+|.|+|.|-...-.+.. +-.
T Consensus 331 ~~~ef~~lL~~a----kvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~i 404 (559)
T PF15024_consen 331 SGDEFQQLLRKA----KVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFI 404 (559)
T ss_pred CHHHHHHHHHhh----hEeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhC
Confidence 999999999999 89984422 23 357899999999988776433221 110
Q ss_pred eCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 001557 608 VLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRIS 665 (1054)
Q Consensus 608 ~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~yl~~l~ 665 (1054)
....-+-|+-+|.+++-+||.++++.+- --++ -.|+-+.+.++....++
T Consensus 405 G~PhVytVd~~n~~~v~~Avk~il~~~v---------~Py~P~efT~egmLeRv~~~ie 454 (559)
T PF15024_consen 405 GEPHVYTVDINNSTEVEAAVKAILATPV---------EPYLPYEFTCEGMLERVNALIE 454 (559)
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHHhcCC---------CCcCCcccCHHHHHHHHHHHHH
Confidence 1123578888999999999999998642 1233 35565555544444443
No 350
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=52.81 E-value=91 Score=35.20 Aligned_cols=100 Identities=11% Similarity=-0.030 Sum_probs=58.3
Q ss_pred CCcEEEEEeCCCCCCCHH--HHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001557 474 RKPMILALARPDPKKNIT--TLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKH 551 (1054)
Q Consensus 474 ~~~~Il~vgRld~~Kgi~--~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~ 551 (1054)
++.++++.|.-.+.|..+ ...+....+.+ ....++ +++++++- .+..+ .+.+..+ ...+.|.
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~--~~~~~v-l~~g~~~e-------~~~~~---~i~~~~~---~~~l~g~ 242 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLA--RGLQIV-LPWGNDAE-------KQRAE---RIAEALP---GAVVLPK 242 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHH--CCCeEE-EeCCCHHH-------HHHHH---HHHhhCC---CCeecCC
Confidence 344567777656777664 56666666642 233443 33333321 11122 2223222 2345677
Q ss_pred CCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcc
Q 001557 552 HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK 598 (1054)
Q Consensus 552 ~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~ 598 (1054)
.+-.++.++++.| +++|-+- . -.+-=|.|.|+|+|+-.
T Consensus 243 ~sL~el~ali~~a----~l~I~~D---S--gp~HlAaa~g~P~i~lf 280 (319)
T TIGR02193 243 MSLAEVAALLAGA----DAVVGVD---T--GLTHLAAALDKPTVTLY 280 (319)
T ss_pred CCHHHHHHHHHcC----CEEEeCC---C--hHHHHHHHcCCCEEEEE
Confidence 7888999999999 9999662 2 23444678899999865
No 351
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=51.46 E-value=20 Score=37.93 Aligned_cols=47 Identities=19% Similarity=0.108 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEE
Q 001557 785 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFIC 836 (1054)
Q Consensus 785 ~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~ 836 (1054)
.+.+.++|+.|+++ |+.++|+||.+...+...++.+|+. .-|+.+++
T Consensus 84 ~~g~~~~l~~L~~~----g~~~~i~S~~~~~~~~~~l~~~gl~-~~f~~i~~ 130 (214)
T PRK13288 84 YETVYETLKTLKKQ----GYKLGIVTTKMRDTVEMGLKLTGLD-EFFDVVIT 130 (214)
T ss_pred CcCHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHcCCh-hceeEEEe
Confidence 56678889999986 8999999999999999999999985 23455554
No 352
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=51.05 E-value=8.6 Score=40.56 Aligned_cols=41 Identities=17% Similarity=0.179 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEe
Q 001557 957 RSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVIL 1000 (1054)
Q Consensus 957 Kg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaM 1000 (1054)
+...+.++++++|++++++++ +||+.+ | +.+-+.+|..++.
T Consensus 143 ~p~~~~~~~~~~~~~~~~~~~-igDs~~-d-~~aa~~aG~~~i~ 183 (213)
T TIGR01449 143 HPDPLLLAAERLGVAPQQMVY-VGDSRV-D-IQAARAAGCPSVL 183 (213)
T ss_pred ChHHHHHHHHHcCCChhHeEE-eCCCHH-H-HHHHHHCCCeEEE
Confidence 467899999999999999988 999988 9 9999999976653
No 353
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=49.70 E-value=22 Score=37.47 Aligned_cols=47 Identities=19% Similarity=0.097 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEE
Q 001557 785 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFIC 836 (1054)
Q Consensus 785 ~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~ 836 (1054)
-+.+.++|+.++++ |+.++|+|+.+...+..+++.+++. .-||.++|
T Consensus 87 ~~g~~~~L~~l~~~----g~~~~i~S~~~~~~~~~~l~~~~l~-~~f~~~~~ 133 (213)
T TIGR01449 87 FPGVEATLGALRAK----GLRLGLVTNKPTPLARPLLELLGLA-KYFSVLIG 133 (213)
T ss_pred CCCHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHcCcH-hhCcEEEe
Confidence 45567888888886 8999999999999999999999984 23565555
No 354
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=49.68 E-value=12 Score=39.90 Aligned_cols=44 Identities=14% Similarity=-0.005 Sum_probs=33.1
Q ss_pred cCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEec
Q 001557 952 PVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 1001 (1054)
Q Consensus 952 p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMg 1001 (1054)
..|..|-..|+..+ |.+.+..++ -||+-+ | .+||+.+++.+++.
T Consensus 158 c~g~~Kv~rl~~~~---~~~~~~~~a-YsDS~~-D-~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 158 CLGHEKVAQLEQKI---GSPLKLYSG-YSDSKQ-D-NPLLAFCEHRWRVS 201 (210)
T ss_pred CCChHHHHHHHHHh---CCChhheEE-ecCCcc-c-HHHHHhCCCcEEEC
Confidence 44556766666554 556667767 788888 8 99999999999985
No 355
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=49.48 E-value=17 Score=38.13 Aligned_cols=48 Identities=23% Similarity=0.218 Sum_probs=38.3
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEE
Q 001557 784 FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFIC 836 (1054)
Q Consensus 784 i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~ 836 (1054)
+.+.+.+.|+.|+++ |+.++|+||.+...+...++.+++. .-||.+++
T Consensus 76 ~~~g~~~~L~~L~~~----g~~~~i~Sn~~~~~~~~~l~~~~l~-~~f~~i~~ 123 (205)
T TIGR01454 76 VFPGVPELLAELRAD----GVGTAIATGKSGPRARSLLEALGLL-PLFDHVIG 123 (205)
T ss_pred cCCCHHHHHHHHHHC----CCeEEEEeCCchHHHHHHHHHcCCh-hheeeEEe
Confidence 356678889999886 8999999999999999999999984 23455544
No 356
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=48.52 E-value=44 Score=32.30 Aligned_cols=41 Identities=17% Similarity=0.083 Sum_probs=33.2
Q ss_pred CHHHHHHHHHHHh-CCCccCEEEEeCc-CCCccccccccCcceEEE
Q 001557 956 SRSQALRYLHVRW-GIDLSNVVVIAGE-CGDTDYEGLLGGVHKTVI 999 (1054)
Q Consensus 956 sKg~AL~~L~~~~-gI~~e~vvaf~GD-~~d~D~~eML~~ag~gVa 999 (1054)
.|...+.++++++ ++++++++. +|| ... | +.+-+.+|...+
T Consensus 86 P~~~~~~~~~~~~~~~~~~~~v~-IGD~~~~-D-i~~A~~~Gi~~i 128 (132)
T TIGR01662 86 PKPGMFLEALKRFNEIDPEESVY-VGDQDLT-D-LQAAKRAGLAFI 128 (132)
T ss_pred CChHHHHHHHHHcCCCChhheEE-EcCCCcc-c-HHHHHHCCCeEE
Confidence 3678999999999 599999988 888 566 7 888888876443
No 357
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=48.35 E-value=18 Score=36.16 Aligned_cols=48 Identities=19% Similarity=0.205 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEc
Q 001557 785 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 837 (1054)
Q Consensus 785 ~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~ 837 (1054)
.+.+.++|++++++ |+.++++|+.+...+...++.+|+. .-||.++++
T Consensus 79 ~~~~~~~L~~l~~~----~~~~~i~Sn~~~~~~~~~l~~~~~~-~~f~~i~~~ 126 (176)
T PF13419_consen 79 YPGVRELLERLKAK----GIPLVIVSNGSRERIERVLERLGLD-DYFDEIISS 126 (176)
T ss_dssp STTHHHHHHHHHHT----TSEEEEEESSEHHHHHHHHHHTTHG-GGCSEEEEG
T ss_pred hhhhhhhhhhcccc----cceeEEeecCCcccccccccccccc-ccccccccc
Confidence 55678889999876 8999999999999999999999985 246766654
No 358
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=47.97 E-value=1.1e+02 Score=34.76 Aligned_cols=103 Identities=15% Similarity=0.104 Sum_probs=59.9
Q ss_pred CCCCcE-EEEEeC-CCCCCCHH--HHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEE
Q 001557 472 NPRKPM-ILALAR-PDPKKNIT--TLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVA 547 (1054)
Q Consensus 472 ~~~~~~-Il~vgR-ld~~Kgi~--~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~ 547 (1054)
++++++ ++..|. ..+.|... ...+.+..+.+ ....+ +++|+.++.+ ....+ .+..+ ...+.
T Consensus 171 ~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~--~~~~i-vl~G~~~e~~--------~~~~i---~~~~~-~~~~~ 235 (334)
T TIGR02195 171 DTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLID--QGYQV-VLFGSAKDHP--------AGNEI---EALLP-GELRN 235 (334)
T ss_pred CCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHH--CCCEE-EEEEChhhHH--------HHHHH---HHhCC-ccccc
Confidence 334555 455555 34666555 56666666542 22344 4556654421 12222 22221 12345
Q ss_pred eCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcc
Q 001557 548 YPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK 598 (1054)
Q Consensus 548 ~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~ 598 (1054)
+.|..+-.++.++++.| |++|-.- . -.+-=|.|.|+|+|+-.
T Consensus 236 l~g~~sL~el~ali~~a----~l~I~~D---S--Gp~HlAaA~~~P~i~lf 277 (334)
T TIGR02195 236 LAGETSLDEAVDLIALA----KAVVTND---S--GLMHVAAALNRPLVALY 277 (334)
T ss_pred CCCCCCHHHHHHHHHhC----CEEEeeC---C--HHHHHHHHcCCCEEEEE
Confidence 77888888999999999 9999662 2 23445778999999854
No 359
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=47.68 E-value=1.1e+02 Score=37.02 Aligned_cols=108 Identities=19% Similarity=0.244 Sum_probs=62.4
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccc-cC----cccceeeCCceEEeC-
Q 001557 543 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN-GG----PVDIHRVLDNGLLVD- 616 (1054)
Q Consensus 543 ~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~-Gg----~~eiv~~~~~Gllv~- 616 (1054)
.++|.+.++.|+.++. ++-+..++||. .-|+|-+ +|++.+|+|+|+.+. |- ..-+.+.+..+++..
T Consensus 334 ~~nV~~~~W~PQ~~ll----l~H~~v~~FvT---HgG~nSt-~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~ 405 (496)
T KOG1192|consen 334 RGNVVLSKWAPQNDLL----LDHPAVGGFVT---HGGWNST-LESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKR 405 (496)
T ss_pred cCceEEecCCCcHHHh----cCCCcCcEEEE---CCcccHH-HHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehh
Confidence 4579889999998766 22111245542 3466666 999999999996553 21 112223333333332
Q ss_pred -CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHH
Q 001557 617 -PHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSY 660 (1054)
Q Consensus 617 -p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~y 660 (1054)
..+.+ +.+++..++.+++..+...+-+.... +..+. ..+..+
T Consensus 406 ~~~~~~-~~~~~~~il~~~~y~~~~~~l~~~~~~~p~~~-~~~~~~ 449 (496)
T KOG1192|consen 406 DLVSEE-LLEAIKEILENEEYKEAAKRLSEILRDQPISP-ELAVKW 449 (496)
T ss_pred hcCcHH-HHHHHHHHHcChHHHHHHHHHHHHHHcCCCCH-HHHHHH
Confidence 22334 88899999888775544443333333 35555 555544
No 360
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=47.34 E-value=50 Score=35.66 Aligned_cols=104 Identities=12% Similarity=0.078 Sum_probs=56.4
Q ss_pred CCCcEEEEEeCCCCCCCHHH--HHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCC
Q 001557 473 PRKPMILALARPDPKKNITT--LVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPK 550 (1054)
Q Consensus 473 ~~~~~Il~vgRld~~Kgi~~--ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g 550 (1054)
++..+++..|.-.+.|.++. ..+.+..+.+. ...+ +++|+..+. ....+..+..... ...+.+.+
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~--~~~v-vl~g~~~~~---------~~~~~~~~~~~~~-~~~~~~~~ 170 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKER--GYRV-VLLGGPEEQ---------EKEIADQIAAGLQ-NPVINLAG 170 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCC--T-EE-EE--SSHHH---------HHHHHHHHHTTHT-TTTEEETT
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhh--CceE-EEEccchHH---------HHHHHHHHHHhcc-cceEeecC
Confidence 34456677777677887664 66666666432 2344 345554320 0111222222221 12688888
Q ss_pred CCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcc
Q 001557 551 HHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK 598 (1054)
Q Consensus 551 ~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~ 598 (1054)
..+-.++.++++.| |++|-+- + -.+-=|.|.|+|+|+-.
T Consensus 171 ~~~l~e~~ali~~a----~~~I~~D---t--g~~HlA~a~~~p~v~lf 209 (247)
T PF01075_consen 171 KTSLRELAALISRA----DLVIGND---T--GPMHLAAALGTPTVALF 209 (247)
T ss_dssp TS-HHHHHHHHHTS----SEEEEES---S--HHHHHHHHTT--EEEEE
T ss_pred CCCHHHHHHHHhcC----CEEEecC---C--hHHHHHHHHhCCEEEEe
Confidence 88888999999999 9999773 2 34455788999999864
No 361
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=47.32 E-value=20 Score=38.11 Aligned_cols=49 Identities=20% Similarity=0.167 Sum_probs=38.9
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCC-CCCcEEEE
Q 001557 784 FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSP-LAFDAFIC 836 (1054)
Q Consensus 784 i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~-~~~d~lI~ 836 (1054)
+.+.+.++|+.|+++ |+.++|+|+.+...+...++.+++.. .-|+.++|
T Consensus 88 l~~G~~~~L~~L~~~----g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~ 137 (220)
T TIGR03351 88 ALPGAEEAFRSLRSS----GIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVC 137 (220)
T ss_pred cCCCHHHHHHHHHHC----CCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEc
Confidence 456678889999986 89999999999999999999998731 12555555
No 362
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=47.01 E-value=17 Score=40.51 Aligned_cols=38 Identities=18% Similarity=0.287 Sum_probs=32.4
Q ss_pred CCCHHHHHH-HHHHHhC--CCccCEEEEeCcCCCccccccccCc
Q 001557 954 LASRSQALR-YLHVRWG--IDLSNVVVIAGECGDTDYEGLLGGV 994 (1054)
Q Consensus 954 ~asKg~AL~-~L~~~~g--I~~e~vvaf~GD~~d~D~~eML~~a 994 (1054)
..+|..++. ..+++++ ++++++++ +||+-+ | +.|..++
T Consensus 190 ~~~K~~~v~~~~~~~~~~~~~~~~vI~-vGDs~~-D-l~ma~g~ 230 (277)
T TIGR01544 190 TFNKNHDVALRNTEYFNQLKDRSNIIL-LGDSQG-D-LRMADGV 230 (277)
T ss_pred ccccHHHHHHHHHHHhCccCCcceEEE-ECcChh-h-hhHhcCC
Confidence 467887766 5899999 99999999 899998 8 9998877
No 363
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=44.93 E-value=25 Score=37.32 Aligned_cols=48 Identities=15% Similarity=0.030 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEc
Q 001557 785 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 837 (1054)
Q Consensus 785 ~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~ 837 (1054)
.+.+.++|+.|+++ |+.++|+|+.+...+...++.+++. .-||.++|+
T Consensus 96 ~~g~~~~L~~L~~~----g~~~~i~Tn~~~~~~~~~l~~~~l~-~~f~~i~~~ 143 (221)
T TIGR02253 96 YPGVRDTLMELRES----GYRLGIITDGLPVKQWEKLERLGVR-DFFDAVITS 143 (221)
T ss_pred CCCHHHHHHHHHHC----CCEEEEEeCCchHHHHHHHHhCChH-HhccEEEEe
Confidence 45678889999886 8999999999988888999999984 236666653
No 364
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=44.43 E-value=2.5e+02 Score=31.64 Aligned_cols=118 Identities=19% Similarity=0.195 Sum_probs=70.6
Q ss_pred CcHhHHHHHHHHHHhcCCCceEEEEEecCcCCCCCCCcc-CCcccccccccccccccccCCCCCeEEEEccCCCCCcccc
Q 001557 191 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTY-AEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQ 269 (1054)
Q Consensus 191 GG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~~~p~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~g~~i~rip~g~~~~~l~ 269 (1054)
-|=.+.+-.|.+.|..+ | |+|-|++-..++|....+. |....| ++....+|+.|..+|....
T Consensus 62 aGKSTli~~L~~~l~~~-G-~rVaVlAVDPSSp~TGGsiLGDRiRM----------~~~~~~~~vFiRs~~srG~----- 124 (323)
T COG1703 62 AGKSTLIEALGRELRER-G-HRVAVLAVDPSSPFTGGSILGDRIRM----------QRLAVDPGVFIRSSPSRGT----- 124 (323)
T ss_pred CchHHHHHHHHHHHHHC-C-cEEEEEEECCCCCCCCccccccHhhH----------HhhccCCCeEEeecCCCcc-----
Confidence 36778889999999999 8 9999999876666543222 222222 2233456888887775322
Q ss_pred cccCCCChHHHHHHHHHHHHHHHHHHhhhhcCCCCCcceEEEEcCCCchHHHHHHHccCCCCEEEEeCCCccch
Q 001557 270 KELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDK 343 (1054)
Q Consensus 270 k~~l~~~l~~f~~~~l~~i~~~~k~L~~~~~~~~~~~pDVIh~h~~~a~~~a~~l~~~~~iP~V~t~H~l~~~~ 343 (1054)
+..... ......+.+.. .-+|+|.....-.|-.=.-+.....+-++++..+.+.+.
T Consensus 125 -------lGGlS~----at~~~i~~ldA-------aG~DvIIVETVGvGQsev~I~~~aDt~~~v~~pg~GD~~ 180 (323)
T COG1703 125 -------LGGLSR----ATREAIKLLDA-------AGYDVIIVETVGVGQSEVDIANMADTFLVVMIPGAGDDL 180 (323)
T ss_pred -------chhhhH----HHHHHHHHHHh-------cCCCEEEEEecCCCcchhHHhhhcceEEEEecCCCCcHH
Confidence 111111 11122222222 448999988765555444444455777888888776543
No 365
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=44.41 E-value=26 Score=35.70 Aligned_cols=72 Identities=17% Similarity=0.104 Sum_probs=47.4
Q ss_pred HHHHHHHHhcCeEE-EEEeeCCeEEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEe
Q 001557 925 ELRKLMRIQALRCH-VIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVIL 1000 (1054)
Q Consensus 925 el~~~l~~~~~~~~-v~~s~~~~~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaM 1000 (1054)
.+.+.+...+..+. +++|... .-+-....--|...+.++++++|+++++++. +||+.+ | +++-+.+|...+.
T Consensus 73 ~~~~~l~~~gl~fd~ii~~~~~-~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~-IGD~~~-D-i~~A~~aGi~~i~ 145 (161)
T TIGR01261 73 LMLQIFRSQGIIFDDVLICPHF-PDDNCDCRKPKIKLLEPYLKKNLIDKARSYV-IGDRET-D-MQLAENLGIRGIQ 145 (161)
T ss_pred HHHHHHHHCCCceeEEEECCCC-CCCCCCCCCCCHHHHHHHHHHcCCCHHHeEE-EeCCHH-H-HHHHHHCCCeEEE
Confidence 45555666666553 3333100 0011222334678899999999999999988 888887 8 9998888876554
No 366
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=44.12 E-value=4.2e+02 Score=28.17 Aligned_cols=47 Identities=15% Similarity=0.271 Sum_probs=36.4
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcc
Q 001557 543 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK 598 (1054)
Q Consensus 543 ~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~ 598 (1054)
..........+..++..+|+.| +++|-..+ -.++=|+++|+|+|+-.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~----~~~Is~Rl-----H~~I~a~~~g~P~i~i~ 283 (286)
T PF04230_consen 237 FNVIIIDYSLSPDELLELISQA----DLVISMRL-----HGAILALSLGVPVIAIS 283 (286)
T ss_pred cceeEecCCCCHHHHHHHHhcC----CEEEecCC-----HHHHHHHHcCCCEEEEe
Confidence 3445566677788999999999 99886654 35677899999999854
No 367
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=43.89 E-value=21 Score=39.83 Aligned_cols=62 Identities=15% Similarity=0.029 Sum_probs=42.4
Q ss_pred CCCEEEEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEEc--CCCHH--HHHHHHHhCCCCC
Q 001557 767 RRKYVFVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLST--ALTIL--ELHSLLVSGGLSP 828 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL--~~~i~~~~~~al~~l~~~~~~~gi~fvIaT--GR~~~--~i~~~l~~l~l~~ 828 (1054)
...--|+|||||.| -+.+.+...+|++.|.++...-.|.|++.| |-... -++++-..||+..
T Consensus 33 ~~~fgfafDIDGVL~RG~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~V 100 (389)
T KOG1618|consen 33 PPTFGFAFDIDGVLFRGHRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVEV 100 (389)
T ss_pred CCceeEEEecccEEEecCCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCcc
Confidence 44578999999999 577788888999999887433457777776 22222 2344556667653
No 368
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=43.63 E-value=86 Score=39.79 Aligned_cols=42 Identities=12% Similarity=0.049 Sum_probs=37.7
Q ss_pred hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 782 SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 782 ~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
....|.++++++..++. ||.|-..||-+...++.+..++|+-
T Consensus 646 DPvRPgV~~AV~~Cq~A----GItVRMVTGDNI~TAkAIA~eCGIL 687 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRA----GITVRMVTGDNINTAKAIARECGIL 687 (1034)
T ss_pred CCCCCCcHHHHHHHHHc----CcEEEEEeCCcHHHHHHHHHHcccc
Confidence 45778889999998886 9999999999999999999999983
No 369
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=43.49 E-value=27 Score=37.21 Aligned_cols=49 Identities=18% Similarity=0.180 Sum_probs=39.8
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEc
Q 001557 784 FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 837 (1054)
Q Consensus 784 i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~ 837 (1054)
+.+.+.++|+.++++ |+.++|+|+.+...+..+++.+++. .-|+.++|+
T Consensus 93 ~~~g~~~~l~~l~~~----g~~~~i~S~~~~~~~~~~l~~~~l~-~~f~~~~~~ 141 (222)
T PRK10826 93 LLPGVREALALCKAQ----GLKIGLASASPLHMLEAVLTMFDLR-DYFDALASA 141 (222)
T ss_pred CCCCHHHHHHHHHHC----CCeEEEEeCCcHHHHHHHHHhCcch-hcccEEEEc
Confidence 356678888999886 8999999999999999999999985 346666554
No 370
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=43.26 E-value=5.8e+02 Score=29.53 Aligned_cols=119 Identities=18% Similarity=0.346 Sum_probs=85.9
Q ss_pred HHHHHHHHcCC--CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccccCcccceeeC
Q 001557 532 SILKLIDKYDL--YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVL 609 (1054)
Q Consensus 532 ~i~~l~~~~~l--~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~ 609 (1054)
.+...+..+++ .++..|-|.+ +++.+++.-. |++|.--+--+.+..-.|++--|=|.|-.. .++.
T Consensus 239 ~F~~f~~~ldlvr~gkasfegR~---~~p~fla~~t---D~VvSHqWeN~lNYlY~daLyggYPLVHNS-----~~l~-- 305 (364)
T PF10933_consen 239 TFVNFANSLDLVRDGKASFEGRF---DFPDFLAQHT---DAVVSHQWENPLNYLYYDALYGGYPLVHNS-----PLLK-- 305 (364)
T ss_pred HHHHHHHhhHHhhcCeeEEeeec---ChHHHHHhCC---CEEEeccccchhhHHHHHHHhcCCCcccCc-----chhc--
Confidence 34444555654 4567777764 6778887764 998877777789999999999999999753 2333
Q ss_pred CceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHhcCCH--HHHHHHHHHH
Q 001557 610 DNGLLVDPHDQQSIADALLKLVS-DKQLWERCRQNGLKNIHQFSW--PEHCKSYLSR 663 (1054)
Q Consensus 610 ~~Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v~~fsw--~~~a~~yl~~ 663 (1054)
..|+..+-.|..+=+++|.+++. ....++..++++++.+..++. +.-++.|.+.
T Consensus 306 d~GYYY~~fD~~~G~r~L~~A~~~HD~~~~~Y~~ra~~~l~~~~p~n~~nv~~y~~~ 362 (364)
T PF10933_consen 306 DVGYYYPDFDAFEGARQLLRAIREHDADLDAYRARARRLLDRLSPENPANVRAYEAR 362 (364)
T ss_pred ccCcCCCCccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhhCCCCHHHHHHHHHh
Confidence 26999999999999999999988 444577888888888854433 3334455444
No 371
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=42.50 E-value=31 Score=37.58 Aligned_cols=48 Identities=13% Similarity=-0.019 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEE
Q 001557 785 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFIC 836 (1054)
Q Consensus 785 ~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~ 836 (1054)
-+.+.++|+.|+++ |+.++|+||.+...+..+++.+++...-+|.+||
T Consensus 101 ~pg~~e~L~~L~~~----g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~ 148 (253)
T TIGR01422 101 IPGVIEVIAYLRAR----GIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVT 148 (253)
T ss_pred CCCHHHHHHHHHHC----CCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEc
Confidence 45567888888886 8999999999999999999998874111266655
No 372
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=42.44 E-value=31 Score=34.30 Aligned_cols=42 Identities=17% Similarity=0.151 Sum_probs=33.5
Q ss_pred CCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEE
Q 001557 955 ASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVI 999 (1054)
Q Consensus 955 asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVa 999 (1054)
=-+...+.++++++|+++++++. +||+.. | ++.=+.+|...+
T Consensus 101 KP~~~~~~~~~~~~~~~~~e~i~-IGDs~~-D-i~~A~~~Gi~~v 142 (147)
T TIGR01656 101 KPKPGLILEALKRLGVDASRSLV-VGDRLR-D-LQAARNAGLAAV 142 (147)
T ss_pred CCCHHHHHHHHHHcCCChHHEEE-EcCCHH-H-HHHHHHCCCCEE
Confidence 34778899999999999999988 888866 7 777667775443
No 373
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=42.42 E-value=29 Score=33.88 Aligned_cols=50 Identities=6% Similarity=0.020 Sum_probs=42.4
Q ss_pred EEEecCCCC--hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 773 VIAADCDTT--SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 773 v~DiDGTL~--~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
+-++++|+. .++-+++.+.|+.|.+. +.+.||||-.+.++.++++-.|++
T Consensus 18 ~~~v~~tiatgGklf~ev~e~iqeL~d~-----V~i~IASgDr~gsl~~lae~~gi~ 69 (152)
T COG4087 18 AGKVLYTIATGGKLFSEVSETIQELHDM-----VDIYIASGDRKGSLVQLAEFVGIP 69 (152)
T ss_pred cceEEEEEccCcEEcHhhHHHHHHHHHh-----heEEEecCCcchHHHHHHHHcCCc
Confidence 456788883 56888888999999873 889999999999999999998884
No 374
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=42.00 E-value=33 Score=37.89 Aligned_cols=48 Identities=15% Similarity=0.101 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEc
Q 001557 785 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 837 (1054)
Q Consensus 785 ~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~ 837 (1054)
-+.+.++|+.|++. |+.++|+|+.+...+..+++.+++. .-||.++++
T Consensus 111 ~pg~~e~L~~L~~~----g~~l~I~Tn~~~~~~~~~l~~~gl~-~~Fd~ii~~ 158 (260)
T PLN03243 111 RPGSREFVQALKKH----EIPIAVASTRPRRYLERAIEAVGME-GFFSVVLAA 158 (260)
T ss_pred CCCHHHHHHHHHHC----CCEEEEEeCcCHHHHHHHHHHcCCH-hhCcEEEec
Confidence 45668888999886 8999999999999999999999985 346777764
No 375
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=41.86 E-value=36 Score=36.12 Aligned_cols=48 Identities=17% Similarity=0.090 Sum_probs=38.2
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEE
Q 001557 784 FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFIC 836 (1054)
Q Consensus 784 i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~ 836 (1054)
+.+.+.++|+.+++. |+.++|+||.....+..+++.+++. ..|+.++|
T Consensus 94 ~~~g~~~~l~~l~~~----g~~~~i~S~~~~~~~~~~l~~~~l~-~~f~~~~~ 141 (226)
T PRK13222 94 LYPGVKETLAALKAA----GYPLAVVTNKPTPFVAPLLEALGIA-DYFSVVIG 141 (226)
T ss_pred cCCCHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHcCCc-cCccEEEc
Confidence 356678888999886 8999999999999999999999984 23455444
No 376
>PRK09449 dUMP phosphatase; Provisional
Probab=41.52 E-value=21 Score=38.03 Aligned_cols=41 Identities=15% Similarity=-0.044 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHhCCCc-cCEEEEeCcCC-CccccccccCcceEEEe
Q 001557 957 RSQALRYLHVRWGIDL-SNVVVIAGECG-DTDYEGLLGGVHKTVIL 1000 (1054)
Q Consensus 957 Kg~AL~~L~~~~gI~~-e~vvaf~GD~~-d~D~~eML~~ag~gVaM 1000 (1054)
+.....++++++|+.+ ++++. +||+. + | +..=+.+|...+.
T Consensus 152 ~p~~~~~~~~~~~~~~~~~~~~-vgD~~~~-D-i~~A~~aG~~~i~ 194 (224)
T PRK09449 152 DVAIFDYALEQMGNPDRSRVLM-VGDNLHS-D-ILGGINAGIDTCW 194 (224)
T ss_pred CHHHHHHHHHHcCCCCcccEEE-EcCCcHH-H-HHHHHHCCCcEEE
Confidence 4567889999999865 67766 88886 5 6 7777777865443
No 377
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=41.18 E-value=34 Score=35.60 Aligned_cols=48 Identities=19% Similarity=0.138 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEc
Q 001557 785 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 837 (1054)
Q Consensus 785 ~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~ 837 (1054)
.+.+.++|++|+++ |+.++|+|+-+...+...++.+|+. .-||.++++
T Consensus 94 ~~~~~~~L~~L~~~----g~~~~i~Sn~~~~~~~~~l~~~gl~-~~fd~i~~s 141 (198)
T TIGR01428 94 HPDVPAGLRALKER----GYRLAILSNGSPAMLKSLVKHAGLD-DPFDAVLSA 141 (198)
T ss_pred CCCHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHCCCh-hhhheeEeh
Confidence 35567888999886 8999999999999999999999984 236666664
No 378
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=41.03 E-value=24 Score=38.26 Aligned_cols=29 Identities=10% Similarity=0.040 Sum_probs=0.0
Q ss_pred CCCEEEEEEecCCC---ChhhHHHHHHHHHHH
Q 001557 767 RRKYVFVIAADCDT---TSDFLEIIKKVVEAA 795 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL---~~~i~~~~~~al~~l 795 (1054)
.+.|.|+||+|||| ...+.....++++.+
T Consensus 8 ~~~k~iiFDlDGTL~D~~~~~~~a~~~~~~~~ 39 (238)
T PRK10748 8 GRISALTFDLDDTLYDNRPVILRTEQEALAFV 39 (238)
T ss_pred CCceeEEEcCcccccCChHHHHHHHHHHHHHH
No 379
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=40.63 E-value=33 Score=40.03 Aligned_cols=47 Identities=15% Similarity=0.053 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEE
Q 001557 785 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFIC 836 (1054)
Q Consensus 785 ~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~ 836 (1054)
-+.+.++|+.|+++ |+.++|+|+.+...+..+++.+|+. .-||.+||
T Consensus 218 ~pGa~ElL~~Lk~~----GiklaIaSn~~~~~~~~~L~~lgL~-~yFd~Iv~ 264 (381)
T PLN02575 218 RTGSQEFVNVLMNY----KIPMALVSTRPRKTLENAIGSIGIR-GFFSVIVA 264 (381)
T ss_pred CcCHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHcCCH-HHceEEEe
Confidence 45568888999886 8999999999999999999999985 34677766
No 380
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=40.49 E-value=42 Score=34.76 Aligned_cols=39 Identities=3% Similarity=-0.111 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 785 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 785 ~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
.+.+.++|+.++++ |+.++|+||.....+..+++.+|+.
T Consensus 82 ~~g~~e~l~~l~~~----g~~~~IvS~~~~~~~~~~l~~~g~~ 120 (201)
T TIGR01491 82 RDYAEELVRWLKEK----GLKTAIVSGGIMCLAKKVAEKLNPD 120 (201)
T ss_pred CccHHHHHHHHHHC----CCEEEEEeCCcHHHHHHHHHHhCCC
Confidence 45678889999886 8999999999999999999999983
No 381
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=40.39 E-value=21 Score=38.06 Aligned_cols=39 Identities=15% Similarity=-0.036 Sum_probs=30.7
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 784 FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 784 i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
+.+.+.++|+.+++. |+.++|+||-....+..+++.++.
T Consensus 71 l~pg~~e~l~~l~~~----g~~~~IvS~~~~~~i~~il~~~~~ 109 (214)
T TIGR03333 71 IREGFREFVAFINEH----GIPFYVISGGMDFFVYPLLEGIVE 109 (214)
T ss_pred ccccHHHHHHHHHHC----CCeEEEECCCcHHHHHHHHHhhCC
Confidence 456667888888875 888999999988888888887643
No 382
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=39.84 E-value=22 Score=37.74 Aligned_cols=35 Identities=26% Similarity=0.324 Sum_probs=29.0
Q ss_pred CHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCc
Q 001557 956 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGV 994 (1054)
Q Consensus 956 sKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~a 994 (1054)
-|+.-++-+|+.-++|.+ .++ +||+-. | .+||+.+
T Consensus 191 ~ka~i~e~~~ele~~d~s-a~~-VGDSIt-D-v~ml~~~ 225 (315)
T COG4030 191 EKAKIMEGYCELEGIDFS-AVV-VGDSIT-D-VKMLEAA 225 (315)
T ss_pred chhHHHHHHHhhcCCCcc-eeE-ecCccc-c-hHHHHHh
Confidence 377778888998899877 555 899998 9 9999977
No 383
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=39.82 E-value=18 Score=38.08 Aligned_cols=41 Identities=10% Similarity=0.096 Sum_probs=35.0
Q ss_pred CHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEE
Q 001557 956 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVI 999 (1054)
Q Consensus 956 sKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVa 999 (1054)
-+...+..+++++|++++++++ +||+.+ | +.+-+.+|..++
T Consensus 132 P~~~~~~~~~~~~~~~~~~~l~-igD~~~-D-i~aA~~~Gi~~i 172 (205)
T TIGR01454 132 PAPDIVREALRLLDVPPEDAVM-VGDAVT-D-LASARAAGTATV 172 (205)
T ss_pred CChHHHHHHHHHcCCChhheEE-EcCCHH-H-HHHHHHcCCeEE
Confidence 3678889999999999999988 888887 8 888888887654
No 384
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=38.78 E-value=30 Score=35.37 Aligned_cols=46 Identities=24% Similarity=0.229 Sum_probs=35.0
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEE
Q 001557 784 FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFIC 836 (1054)
Q Consensus 784 i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~ 836 (1054)
+-+.+.++|+.|++. |+.++++|+. ..+...++.+++. .-||.+++
T Consensus 89 ~~~g~~~~l~~l~~~----g~~i~i~S~~--~~~~~~l~~~~l~-~~f~~v~~ 134 (185)
T TIGR02009 89 VLPGIENFLKRLKKK----GIAVGLGSSS--KNADRILAKLGLT-DYFDAIVD 134 (185)
T ss_pred CCcCHHHHHHHHHHc----CCeEEEEeCc--hhHHHHHHHcChH-HHCCEeee
Confidence 355668888999886 8999999998 6678889998884 23566655
No 385
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=38.67 E-value=18 Score=38.81 Aligned_cols=43 Identities=16% Similarity=0.170 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcc---eEEEec
Q 001557 956 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVH---KTVILK 1001 (1054)
Q Consensus 956 sKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag---~gVaMg 1001 (1054)
-.-..+.++++++|+++++++. +||+.+ | +.|=+.+| .+|..|
T Consensus 146 P~P~~l~~~~~~~~~~~~~~l~-VGDs~~-D-i~aA~~Ag~~~v~v~~g 191 (220)
T COG0546 146 PDPEPLLLLLEKLGLDPEEALM-VGDSLN-D-ILAAKAAGVPAVGVTWG 191 (220)
T ss_pred cCHHHHHHHHHHhCCChhheEE-ECCCHH-H-HHHHHHcCCCEEEEECC
Confidence 3567888999999999767777 999999 9 99999998 344444
No 386
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=38.51 E-value=30 Score=35.38 Aligned_cols=39 Identities=13% Similarity=0.044 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 785 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 785 ~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
.+.+.+.|+.+++. |+.++|+|+.+...+..+++.+++.
T Consensus 74 ~~g~~~ll~~l~~~----g~~~~i~S~~~~~~~~~~l~~~~l~ 112 (188)
T TIGR01489 74 DPGFKEFIAFIKEH----GIDFIVISDGNDFFIDPVLEGIGEK 112 (188)
T ss_pred CccHHHHHHHHHHc----CCcEEEEeCCcHHHHHHHHHHcCCh
Confidence 44467788888875 8999999999999999999998884
No 387
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=38.19 E-value=53 Score=34.21 Aligned_cols=40 Identities=13% Similarity=0.081 Sum_probs=35.1
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 784 FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 784 i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
+.+...+.|+.++++ |+.++|+||-+...+..+++.+|++
T Consensus 88 ~~~~~~~~l~~l~~~----g~~v~ivS~s~~~~v~~~~~~lg~~ 127 (202)
T TIGR01490 88 LYPEARDLIRWHKAE----GHTIVLVSASLTILVKPLARILGID 127 (202)
T ss_pred ccHHHHHHHHHHHHC----CCEEEEEeCCcHHHHHHHHHHcCCc
Confidence 567788889988886 8999999999999999999999983
No 388
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=37.45 E-value=35 Score=36.29 Aligned_cols=52 Identities=15% Similarity=0.218 Sum_probs=44.7
Q ss_pred EEEecCCCCHHHHHHHHHHHh---CCCccCEEEEeCcCCCccccccccCcceEEEec
Q 001557 948 LHVIPVLASRSQALRYLHVRW---GIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 1001 (1054)
Q Consensus 948 lEV~p~~asKg~AL~~L~~~~---gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMg 1001 (1054)
-..-|.+--||.-|..+.... |+.-+.++- +||++| ||-.|+.-...-|||.
T Consensus 155 C~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iY-vGDG~n-D~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 155 CNLCPSNMCKGLVLDELVASQLKDGVRYERLIY-VGDGAN-DFCPVLRLRACDVAMP 209 (256)
T ss_pred cCcCchhhhhhHHHHHHHHHHhhcCCceeeEEE-EcCCCC-CcCcchhcccCceecc
Confidence 455789999999998876554 888888888 999999 9999999999999996
No 389
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=37.09 E-value=31 Score=33.65 Aligned_cols=27 Identities=19% Similarity=0.175 Sum_probs=21.8
Q ss_pred CccCEEEEeCcCCCccccccccCcceEEEe
Q 001557 971 DLSNVVVIAGECGDTDYEGLLGGVHKTVIL 1000 (1054)
Q Consensus 971 ~~e~vvaf~GD~~d~D~~eML~~ag~gVaM 1000 (1054)
+-+.+++ +||..| | +-||..+..||+.
T Consensus 92 ~~~k~vm-VGnGaN-D-~laLr~ADlGI~t 118 (152)
T COG4087 92 RYEKVVM-VGNGAN-D-ILALREADLGICT 118 (152)
T ss_pred CCcEEEE-ecCCcc-h-HHHhhhcccceEE
Confidence 3344555 999999 9 9999999999865
No 390
>PHA02597 30.2 hypothetical protein; Provisional
Probab=36.98 E-value=17 Score=38.02 Aligned_cols=39 Identities=13% Similarity=0.136 Sum_probs=29.1
Q ss_pred CHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCc--ceEEE
Q 001557 956 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGV--HKTVI 999 (1054)
Q Consensus 956 sKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~a--g~gVa 999 (1054)
.|...+.++++++| +++++ |+||+-+ | +..=..+ |..++
T Consensus 131 ~kp~~~~~a~~~~~--~~~~v-~vgDs~~-d-i~aA~~a~~Gi~~i 171 (197)
T PHA02597 131 SKEKLFIKAKEKYG--DRVVC-FVDDLAH-N-LDAAHEALSQLPVI 171 (197)
T ss_pred ccHHHHHHHHHHhC--CCcEE-EeCCCHH-H-HHHHHHHHcCCcEE
Confidence 36788999999999 45554 4999999 8 7776666 76544
No 391
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=36.50 E-value=2.1e+02 Score=32.42 Aligned_cols=46 Identities=13% Similarity=-0.028 Sum_probs=35.6
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccc
Q 001557 545 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN 599 (1054)
Q Consensus 545 ~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~ 599 (1054)
.+.+.|..+-.++.++++.| |++|-.. .-.+-=|.|+|+|+|+-.-
T Consensus 235 ~~~l~g~~sL~elaali~~a----~l~I~nD-----SGp~HlA~A~g~p~valfG 280 (322)
T PRK10964 235 YVEVLPKLSLEQVARVLAGA----KAVVSVD-----TGLSHLTAALDRPNITLYG 280 (322)
T ss_pred cceecCCCCHHHHHHHHHhC----CEEEecC-----CcHHHHHHHhCCCEEEEEC
Confidence 46677888888999999999 9999663 2344557899999999654
No 392
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=36.20 E-value=46 Score=36.69 Aligned_cols=49 Identities=12% Similarity=0.017 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEc
Q 001557 785 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 837 (1054)
Q Consensus 785 ~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~ 837 (1054)
-+.+.++|+.|+++ |+.++|+||.+...+..+++.+++....+|.++|+
T Consensus 103 ~pg~~elL~~L~~~----g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~ 151 (267)
T PRK13478 103 IPGVLEVIAALRAR----GIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTT 151 (267)
T ss_pred CCCHHHHHHHHHHC----CCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcC
Confidence 34567788888886 89999999999999998998876531113555543
No 393
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=36.16 E-value=40 Score=37.49 Aligned_cols=47 Identities=9% Similarity=0.127 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEE
Q 001557 785 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFIC 836 (1054)
Q Consensus 785 ~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~ 836 (1054)
.+.+.++|+.|+++ |+.++|+|+.+...+..+++.+|+. ..|+.+++
T Consensus 144 ~pg~~e~L~~L~~~----gi~laIvSn~~~~~~~~~L~~~gl~-~~F~~vi~ 190 (273)
T PRK13225 144 FPGVADLLAQLRSR----SLCLGILSSNSRQNIEAFLQRQGLR-SLFSVVQA 190 (273)
T ss_pred CCCHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHcCCh-hheEEEEe
Confidence 45678889999886 8999999999999999999999984 23454443
No 394
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=35.03 E-value=46 Score=33.79 Aligned_cols=47 Identities=23% Similarity=0.135 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEc
Q 001557 785 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 837 (1054)
Q Consensus 785 ~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~ 837 (1054)
.+.+.++|++|++. |+.++|+|+-+... ...+..+++. ..||.+|++
T Consensus 87 ~~g~~~~l~~l~~~----g~~~~i~Tn~~~~~-~~~~~~~~l~-~~f~~i~~~ 133 (183)
T TIGR01509 87 LPGVEPLLEALRAR----GKKLALLTNSPRDH-AVLVQELGLR-DLFDVVIFS 133 (183)
T ss_pred CcCHHHHHHHHHHC----CCeEEEEeCCchHH-HHHHHhcCCH-HHCCEEEEc
Confidence 56678889999886 89999999998887 6666657874 346777764
No 395
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=35.00 E-value=1.3e+02 Score=33.61 Aligned_cols=99 Identities=11% Similarity=0.064 Sum_probs=53.4
Q ss_pred CHHHHHHHHHhcccccCCC-cEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcC
Q 001557 489 NITTLVKAFGECRPLRELA-NLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKT 567 (1054)
Q Consensus 489 gi~~ll~A~~~l~~~~~~~-~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~ 567 (1054)
-+...++.+.++ .|.. ++.++...... ........+.+.+.++++. +....--+.+++...+......
T Consensus 116 ~~~~~l~l~~~l---~P~~k~igvl~~~~~~------~~~~~~~~~~~~a~~~g~~--l~~~~v~~~~~~~~~~~~l~~~ 184 (294)
T PF04392_consen 116 PIEKQLELIKKL---FPDAKRIGVLYDPSEP------NSVAQIEQLRKAAKKLGIE--LVEIPVPSSEDLEQALEALAEK 184 (294)
T ss_dssp -HHHHHHHHHHH---STT--EEEEEEETT-H------HHHHHHHHHHHHHHHTT-E--EEEEEESSGGGHHHHHHHHCTT
T ss_pred CHHHHHHHHHHh---CCCCCEEEEEecCCCc------cHHHHHHHHHHHHHHcCCE--EEEEecCcHhHHHHHHHHhhcc
Confidence 345555655555 3332 33334443321 1234567778888888864 3222233467888888877777
Q ss_pred CcEEEecCC---CCCCcHHHHHHHHcCCCEEEcc
Q 001557 568 KGVFINPAF---IEPFGLTLIEAAAYGLPIVATK 598 (1054)
Q Consensus 568 ~dv~v~ps~---~Egfgl~l~EAmA~G~PVIat~ 598 (1054)
.|++++++. ...+...+..+..+++||++..
T Consensus 185 ~da~~~~~~~~~~~~~~~i~~~~~~~~iPv~~~~ 218 (294)
T PF04392_consen 185 VDALYLLPDNLVDSNFEAILQLANEAKIPVFGSS 218 (294)
T ss_dssp -SEEEE-S-HHHHHTHHHHHHHCCCTT--EEESS
T ss_pred CCEEEEECCcchHhHHHHHHHHHHhcCCCEEECC
Confidence 798888753 2333444556666799999976
No 396
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=34.44 E-value=48 Score=36.83 Aligned_cols=48 Identities=15% Similarity=0.018 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEc
Q 001557 785 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 837 (1054)
Q Consensus 785 ~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~ 837 (1054)
.+.+.++|+.|++. |+.++|+||.+...+...++.+++. .-|+.++|+
T Consensus 103 ~~g~~e~L~~Lk~~----g~~l~ivTn~~~~~~~~~l~~~~i~-~~f~~i~~~ 150 (272)
T PRK13223 103 YPGVRDTLKWLKKQ----GVEMALITNKPERFVAPLLDQMKIG-RYFRWIIGG 150 (272)
T ss_pred CCCHHHHHHHHHHC----CCeEEEEECCcHHHHHHHHHHcCcH-hhCeEEEec
Confidence 45678888888876 8999999999999999999998884 235555554
No 397
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=34.43 E-value=23 Score=37.58 Aligned_cols=40 Identities=15% Similarity=0.104 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHhCCC-ccCEEEEeCcCCCccccccccCcceEEE
Q 001557 957 RSQALRYLHVRWGID-LSNVVVIAGECGDTDYEGLLGGVHKTVI 999 (1054)
Q Consensus 957 Kg~AL~~L~~~~gI~-~e~vvaf~GD~~d~D~~eML~~ag~gVa 999 (1054)
+...+.++++++|+. ++++++ +||+.. | +.+=+.+|..++
T Consensus 147 ~p~~~~~a~~~~~~~~~~~~~~-igD~~~-D-i~aa~~aG~~~~ 187 (220)
T TIGR03351 147 APDLILRAMELTGVQDVQSVAV-AGDTPN-D-LEAGINAGAGAV 187 (220)
T ss_pred CHHHHHHHHHHcCCCChhHeEE-eCCCHH-H-HHHHHHCCCCeE
Confidence 678999999999997 789988 888887 9 999999998873
No 398
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=34.31 E-value=55 Score=35.14 Aligned_cols=48 Identities=8% Similarity=-0.029 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEc
Q 001557 785 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 837 (1054)
Q Consensus 785 ~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~ 837 (1054)
-+.+.++|+.|++. |+.++|+|+.+...+...++.+++. ..||.++|.
T Consensus 97 ~pg~~~~L~~L~~~----g~~l~i~Tn~~~~~~~~~l~~~~l~-~~f~~i~~~ 144 (229)
T PRK13226 97 FDGVEGMLQRLECA----GCVWGIVTNKPEYLARLILPQLGWE-QRCAVLIGG 144 (229)
T ss_pred CCCHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCch-hcccEEEec
Confidence 45567788888876 8999999999999888899999884 345666553
No 399
>PRK02083 imidazole glycerol phosphate synthase subunit HisF; Provisional
Probab=31.99 E-value=7e+02 Score=27.15 Aligned_cols=53 Identities=15% Similarity=0.266 Sum_probs=34.2
Q ss_pred CCEEEEEEecCCCChhhHHHHHHHHHHHhccCCCCceEEEEEcC-CCHHHHHHHHHhCCC
Q 001557 768 RKYVFVIAADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTA-LTILELHSLLVSGGL 826 (1054)
Q Consensus 768 ~kkLiv~DiDGTL~~~i~~~~~~al~~l~~~~~~~gi~fvIaTG-R~~~~i~~~l~~l~l 826 (1054)
.+.+.++|+|.+.+.. ....+.++++.+. -++.+.+.-| |+...+..++. .|.
T Consensus 44 ~~~i~i~dl~~~~~~~--~~~~~~i~~i~~~---~~ipv~~~GGi~s~~~~~~~l~-~Ga 97 (253)
T PRK02083 44 ADELVFLDITASSEGR--DTMLDVVERVAEQ---VFIPLTVGGGIRSVEDARRLLR-AGA 97 (253)
T ss_pred CCEEEEEeCCcccccC--cchHHHHHHHHHh---CCCCEEeeCCCCCHHHHHHHHH-cCC
Confidence 4589999999876322 3455666666665 3456644444 47888888877 555
No 400
>PRK11590 hypothetical protein; Provisional
Probab=31.77 E-value=71 Score=33.87 Aligned_cols=47 Identities=6% Similarity=-0.067 Sum_probs=34.7
Q ss_pred HHHHHHHH-HHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcC
Q 001557 786 EIIKKVVE-AAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNS 838 (1054)
Q Consensus 786 ~~~~~al~-~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~n 838 (1054)
+.+.+.|+ .+++. |..++|+|+.+...+.++++.+++. ..+.+||..
T Consensus 98 pga~e~L~~~l~~~----G~~l~IvSas~~~~~~~il~~l~~~--~~~~~i~t~ 145 (211)
T PRK11590 98 PVVQERLTTYLLSS----DADVWLITGSPQPLVEQVYFDTPWL--PRVNLIASQ 145 (211)
T ss_pred ccHHHHHHHHHHhC----CCEEEEEeCCcHHHHHHHHHHcccc--ccCceEEEE
Confidence 45577774 45554 8999999999999999999998851 235577643
No 401
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=31.34 E-value=58 Score=32.96 Aligned_cols=39 Identities=8% Similarity=-0.044 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 785 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 785 ~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
.+.+.+.++.++++ |+.++|+||.....+..+++.+++.
T Consensus 75 ~~g~~~~l~~l~~~----g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 75 RPGARELISWLKER----GIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred CcCHHHHHHHHHHC----CCEEEEECCCcHHHHHHHHHHcCCc
Confidence 35667888888886 8999999999999999999999883
No 402
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=30.57 E-value=29 Score=37.03 Aligned_cols=36 Identities=17% Similarity=0.047 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhC
Q 001557 785 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSG 824 (1054)
Q Consensus 785 ~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l 824 (1054)
.+.+.+.|+.++++ |+.++|+||-....+..+++.+
T Consensus 76 ~pG~~e~l~~l~~~----g~~~~IvS~~~~~~i~~il~~~ 111 (219)
T PRK09552 76 REGFHEFVQFVKEN----NIPFYVVSGGMDFFVYPLLQGL 111 (219)
T ss_pred CcCHHHHHHHHHHc----CCeEEEECCCcHHHHHHHHHHh
Confidence 44455666666654 6666666666666666666665
No 403
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=30.48 E-value=42 Score=35.62 Aligned_cols=29 Identities=3% Similarity=-0.125 Sum_probs=0.0
Q ss_pred cCCCEEEEEEecCCC---ChhhHHHHHHHHHH
Q 001557 766 RRRKYVFVIAADCDT---TSDFLEIIKKVVEA 794 (1054)
Q Consensus 766 ~~~kkLiv~DiDGTL---~~~i~~~~~~al~~ 794 (1054)
..+.++++||+|||| ..-..+...++++.
T Consensus 1 ~~~~~~viFD~DGTL~d~~~~~~~a~~~~~~~ 32 (221)
T PRK10563 1 MSQIEAVFFDCDGTLVDSEVICSRAYVTMFAE 32 (221)
T ss_pred CCCCCEEEECCCCCCCCChHHHHHHHHHHHHH
No 404
>PRK13015 3-dehydroquinate dehydratase; Reviewed
Probab=30.07 E-value=1.3e+02 Score=30.00 Aligned_cols=116 Identities=17% Similarity=0.218 Sum_probs=69.9
Q ss_pred EecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCC-cEEEecCCCCCCcHHHHHHHHc-
Q 001557 513 MGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTK-GVFINPAFIEPFGLTLIEAAAY- 590 (1054)
Q Consensus 513 iG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~-dv~v~ps~~Egfgl~l~EAmA~- 590 (1054)
+|.++.--.-...-.++...+.+.+..+++ .+.|..+=...++.+.++.|.... ++.++|.-+--.+..+..|+++
T Consensus 15 LG~REp~iYG~~tl~~i~~~~~~~a~~~g~--~~~~~QSN~EGelId~i~~a~~~~dgiIINpga~THtSiAl~DAl~~~ 92 (146)
T PRK13015 15 LGTREPAIYGHETLADVEALCRAAAEALGL--EVEFRQSNHEGELIDWIHEARGDVAGIVINPGAYTHTSVAIRDALAAL 92 (146)
T ss_pred cCCCCCCcCCCCCHHHHHHHHHHHHHHcCC--EEEEEeeCcHHHHHHHHHHhhhcCCEEEEcchHHhhhHHHHHHHHHcC
Confidence 355543222222345567777788887776 366655544557777777764333 4778898777788999999876
Q ss_pred CCCEEEccc--cCccc------ceeeCCceEEeCCCCHHHHHHHHHHHH
Q 001557 591 GLPIVATKN--GGPVD------IHRVLDNGLLVDPHDQQSIADALLKLV 631 (1054)
Q Consensus 591 G~PVIat~~--Gg~~e------iv~~~~~Gllv~p~d~~~la~aI~~ll 631 (1054)
++|+|=--. --.+| ++..-..|.+.- .-.+...-||..++
T Consensus 93 ~~P~VEVHiSNi~aRE~fR~~S~is~~~~G~I~G-~G~~gY~lAl~al~ 140 (146)
T PRK13015 93 ELPVIEVHISNVHAREAFRHHSYVSAIADGVICG-LGTEGYRLALRRLA 140 (146)
T ss_pred CCCEEEEEcCCccccccccccccccCceeEEEee-CCHHHHHHHHHHHH
Confidence 899875332 11222 333334466553 34566666666665
No 405
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
Probab=29.97 E-value=9.8e+02 Score=28.85 Aligned_cols=70 Identities=19% Similarity=0.223 Sum_probs=49.8
Q ss_pred CcEEEecCC-CCCCcHHHHHHHHc---CCCEEE-ccccCc---ccceeeCCceEEeCCCCHHHHHHHHHHHHhCHHHH
Q 001557 568 KGVFINPAF-IEPFGLTLIEAAAY---GLPIVA-TKNGGP---VDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLW 637 (1054)
Q Consensus 568 ~dv~v~ps~-~Egfgl~l~EAmA~---G~PVIa-t~~Gg~---~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~ 637 (1054)
.|++|.=-. .+.-|+.+++.+.. ++|||. |..|.+ ++-++.|..-++..|-+++.+...+.+++......
T Consensus 49 ~~lvl~Di~mp~~~Gl~ll~~i~~~~~~~pVI~~Tg~g~i~~AV~A~k~GA~Dfl~KP~~~~~L~~~v~ral~~~~~~ 126 (464)
T COG2204 49 FDLVLLDIRMPGMDGLELLKEIKSRDPDLPVIVMTGHGDIDTAVEALRLGAFDFLEKPFDLDRLLAIVERALELRELQ 126 (464)
T ss_pred CCEEEEecCCCCCchHHHHHHHHhhCCCCCEEEEeCCCCHHHHHHHHhcCcceeeeCCCCHHHHHHHHHHHHHHhhhh
Confidence 366555433 45567888887766 688876 555653 34445566678999999999999999999865543
No 406
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=29.96 E-value=2.8e+02 Score=31.65 Aligned_cols=102 Identities=14% Similarity=0.114 Sum_probs=58.6
Q ss_pred cEEEEEeCCCCCCCH--HHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCC
Q 001557 476 PMILALARPDPKKNI--TTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHK 553 (1054)
Q Consensus 476 ~~Il~vgRld~~Kgi--~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~ 553 (1054)
.+++..|.-.+.|.. +...+.+..+.. ....+ +++|+..+.+ .+..+.+ .+..+-...+.+.|..+
T Consensus 183 ~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~--~~~~i-vl~g~p~~~e------~~~~~~i---~~~~~~~~~~~l~g~~s 250 (344)
T TIGR02201 183 YIVIQPTSRWFFKCWDNDRFSALIDALHA--RGYEV-VLTSGPDKDE------LAMVNEI---AQGCQTPRVTSLAGKLT 250 (344)
T ss_pred EEEEeCCCCccccCCCHHHHHHHHHHHHh--CCCeE-EEecCCCHHH------HHHHHHH---HhhCCCCcccccCCCCC
Confidence 345666655555644 345555555532 23444 3455432100 1112222 23333223456788888
Q ss_pred CCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcc
Q 001557 554 QSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK 598 (1054)
Q Consensus 554 ~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~ 598 (1054)
-.++.++++.| +++|-. |. -.+-=|.|.|+|+|+=.
T Consensus 251 L~el~ali~~a----~l~Vs~---DS--Gp~HlAaA~g~p~v~Lf 286 (344)
T TIGR02201 251 LPQLAALIDHA----RLFIGV---DS--VPMHMAAALGTPLVALF 286 (344)
T ss_pred HHHHHHHHHhC----CEEEec---CC--HHHHHHHHcCCCEEEEE
Confidence 88999999999 999966 22 34455788999999864
No 407
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=29.94 E-value=51 Score=35.20 Aligned_cols=40 Identities=10% Similarity=0.010 Sum_probs=35.8
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 001557 784 FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 827 (1054)
Q Consensus 784 i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~ 827 (1054)
+.+...+.++.+++. |..++|+||=...-+.++.+.+|++
T Consensus 78 l~~ga~elv~~lk~~----G~~v~iiSgg~~~lv~~ia~~lg~d 117 (212)
T COG0560 78 LTPGAEELVAALKAA----GAKVVIISGGFTFLVEPIAERLGID 117 (212)
T ss_pred CCccHHHHHHHHHHC----CCEEEEEcCChHHHHHHHHHHhCCc
Confidence 467778889999986 9999999999999999999999984
No 408
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=29.86 E-value=60 Score=34.82 Aligned_cols=48 Identities=21% Similarity=0.085 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEc
Q 001557 785 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 837 (1054)
Q Consensus 785 ~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~ 837 (1054)
-+.+.+.|+.|+++ |+.++|+|.-+...+...++.+++. .-||.++|+
T Consensus 95 ~~g~~e~L~~Lk~~----g~~~~i~Tn~~~~~~~~~l~~~~l~-~~fd~iv~s 142 (224)
T PRK14988 95 REDTVPFLEALKAS----GKRRILLTNAHPHNLAVKLEHTGLD-AHLDLLLST 142 (224)
T ss_pred CCCHHHHHHHHHhC----CCeEEEEeCcCHHHHHHHHHHCCcH-HHCCEEEEe
Confidence 45567888999886 8999999998888888889988874 346766654
No 409
>PRK11587 putative phosphatase; Provisional
Probab=29.81 E-value=70 Score=33.95 Aligned_cols=46 Identities=17% Similarity=0.130 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEE
Q 001557 785 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFIC 836 (1054)
Q Consensus 785 ~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~ 836 (1054)
-+.+.++|+.|+++ |+.++|+|+.+...+...++..++. .++.++|
T Consensus 85 ~pg~~e~L~~L~~~----g~~~~ivTn~~~~~~~~~l~~~~l~--~~~~i~~ 130 (218)
T PRK11587 85 LPGAIALLNHLNKL----GIPWAIVTSGSVPVASARHKAAGLP--APEVFVT 130 (218)
T ss_pred CcCHHHHHHHHHHc----CCcEEEEcCCCchHHHHHHHhcCCC--CccEEEE
Confidence 45678888999886 8999999998887777788888873 3565554
No 410
>PF02947 Flt3_lig: flt3 ligand ; InterPro: IPR004213 The flt3 (fms-related tyrosine kinase 3) ligand is a short chain cytokine with a 4 helical bundle fold. It is a type I membrane protein which stimulates the proliferation of of early hematopoeitic cells, and synergises well with other colony stimulating factors and interleukins.; GO: 0005125 cytokine activity, 0016020 membrane; PDB: 3QS7_A 1ETE_C 3QS9_A.
Probab=28.98 E-value=43 Score=32.01 Aligned_cols=13 Identities=23% Similarity=0.848 Sum_probs=9.2
Q ss_pred hhhhhhHHHHHhh
Q 001557 74 RLENMCWRIWNLA 86 (1054)
Q Consensus 74 ~~~~~~~~~~~~~ 86 (1054)
+=|-+||-.|||.
T Consensus 39 qdde~C~alWhL~ 51 (135)
T PF02947_consen 39 QDDELCGALWHLV 51 (135)
T ss_dssp ---TTTHHHHHHH
T ss_pred ccHHHHHHHHHHH
Confidence 4477999999986
No 411
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=28.71 E-value=1e+03 Score=27.98 Aligned_cols=70 Identities=17% Similarity=0.281 Sum_probs=45.3
Q ss_pred CcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccc-cCcccceee-CCce--EEeCCCCHHHHHHHHHHH
Q 001557 555 SDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN-GGPVDIHRV-LDNG--LLVDPHDQQSIADALLKL 630 (1054)
Q Consensus 555 ~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~-Gg~~eiv~~-~~~G--llv~p~d~~~la~aI~~l 630 (1054)
+++...++.+ |++|-.-+ -.++=|++.|+|+|+-.. +-...+.++ +-.+ +-+.|.|.+.+..+..+.
T Consensus 277 ~~~~~~l~~~----dl~Vg~R~-----HsaI~al~~g~p~i~i~Y~~K~~~l~~~~gl~~~~~~i~~~~~~~l~~~~~e~ 347 (385)
T COG2327 277 EELGGILAAC----DLIVGMRL-----HSAIMALAFGVPAIAIAYDPKVRGLMQDLGLPGFAIDIDPLDAEILSAVVLER 347 (385)
T ss_pred HHHHHHhccC----ceEEeehh-----HHHHHHHhcCCCeEEEeecHHHHHHHHHcCCCcccccCCCCchHHHHHHHHHH
Confidence 5666788888 88874322 357789999999998663 222222221 1123 344577888898888888
Q ss_pred HhC
Q 001557 631 VSD 633 (1054)
Q Consensus 631 l~d 633 (1054)
++.
T Consensus 348 ~~~ 350 (385)
T COG2327 348 LTK 350 (385)
T ss_pred Hhc
Confidence 874
No 412
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=28.36 E-value=46 Score=44.07 Aligned_cols=40 Identities=10% Similarity=-0.046 Sum_probs=32.2
Q ss_pred hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 783 DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 783 ~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
++-+..-+.|.+|++. ||++=+.||=-.+.+..+.-++++
T Consensus 651 kLQdgVPetI~~L~~A----GIKIWVLTGDK~ETAiNIg~sC~L 690 (1151)
T KOG0206|consen 651 KLQDGVPETIAKLAQA----GIKIWVLTGDKQETAINIGYSCRL 690 (1151)
T ss_pred hhccCchHHHHHHHHc----CCEEEEEcCcHHHHHHHHHHhhcC
Confidence 3444445566788886 999999999999999999888887
No 413
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=28.32 E-value=47 Score=39.90 Aligned_cols=39 Identities=13% Similarity=0.183 Sum_probs=30.2
Q ss_pred CHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEE
Q 001557 956 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVI 999 (1054)
Q Consensus 956 sKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVa 999 (1054)
.|...+...+++++ ++++++ +||+.+ | +.+-+.+|..++
T Consensus 386 ~kP~~~~~al~~l~--~~~~v~-VGDs~~-D-i~aAk~AG~~~I 424 (459)
T PRK06698 386 NKSDLVKSILNKYD--IKEAAV-VGDRLS-D-INAAKDNGLIAI 424 (459)
T ss_pred CCcHHHHHHHHhcC--cceEEE-EeCCHH-H-HHHHHHCCCeEE
Confidence 45667788887765 578888 888888 9 999999997544
No 414
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=27.47 E-value=29 Score=35.49 Aligned_cols=40 Identities=5% Similarity=-0.020 Sum_probs=33.8
Q ss_pred CHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEE
Q 001557 956 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTV 998 (1054)
Q Consensus 956 sKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gV 998 (1054)
-+...+++.++++|++++++++ +||+.+ | +..-+.+|..+
T Consensus 142 p~p~~~~~~~~~~~~~~~~~v~-vgD~~~-d-i~aA~~aG~~~ 181 (185)
T TIGR01990 142 PDPEIFLAAAEGLGVSPSECIG-IEDAQA-G-IEAIKAAGMFA 181 (185)
T ss_pred CChHHHHHHHHHcCCCHHHeEE-EecCHH-H-HHHHHHcCCEE
Confidence 4678889999999999999999 888888 8 88888777654
No 415
>COG0757 AroQ 3-dehydroquinate dehydratase II [Amino acid transport and metabolism]
Probab=27.44 E-value=2.5e+02 Score=27.80 Aligned_cols=88 Identities=20% Similarity=0.270 Sum_probs=58.6
Q ss_pred CcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcC-CcEEEecCCCCCCcHHHH
Q 001557 507 ANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKT-KGVFINPAFIEPFGLTLI 585 (1054)
Q Consensus 507 ~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~-~dv~v~ps~~Egfgl~l~ 585 (1054)
||+- .+|.++.--.-...-.++...+...+.++++ .+.|..+=...++.+.+..|... .+++++|.-+.-....+-
T Consensus 9 PNLN-~LG~REp~iYG~~Tl~di~~~~~~~a~~~g~--~v~~~QSN~Eg~Lid~Ihea~~~~~~IvINpga~THTSvAlr 85 (146)
T COG0757 9 PNLN-LLGKREPGIYGSTTLEDIEADLEEEAAKLGV--EVEFRQSNHEGELIDWIHEARGKAGDIVINPGAYTHTSVALR 85 (146)
T ss_pred CCcc-ccCCCCCCccCcccHHHHHHHHHHHHHHcCc--eEEEEecCchHHHHHHHHHhhccCCeEEEcCccchhhHHHHH
Confidence 4442 2465543222222335566777777777775 46665554456788888888654 349999988888889999
Q ss_pred HHHHc-CCCEEEc
Q 001557 586 EAAAY-GLPIVAT 597 (1054)
Q Consensus 586 EAmA~-G~PVIat 597 (1054)
.|+++ .+|+|=-
T Consensus 86 DAi~av~iP~vEV 98 (146)
T COG0757 86 DAIAAVSIPVVEV 98 (146)
T ss_pred HHHHhcCCCEEEE
Confidence 99877 8898753
No 416
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=27.24 E-value=1e+02 Score=37.53 Aligned_cols=53 Identities=13% Similarity=0.155 Sum_probs=46.5
Q ss_pred EEEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 770 YVFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 770 kLiv~DiDGTL------~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
+.+++.+|+++ ...+.+.+.++++++++. |+.+++.||-+...+..+.+++|+
T Consensus 328 ~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l~~~----gi~~~~ltGD~~~~a~~ia~~lgi 386 (499)
T TIGR01494 328 RVLAVASKETLLGLLGLEDPLRDDAKETISELREA----GIRVIMLTGDNVLTAKAIAKELGI 386 (499)
T ss_pred EEEEEEECCeEEEEEEecCCCchhHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCc
Confidence 67788888877 477888899999999986 889999999999999999999875
No 417
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=26.71 E-value=38 Score=34.92 Aligned_cols=39 Identities=21% Similarity=0.183 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEE
Q 001557 958 SQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVI 999 (1054)
Q Consensus 958 g~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVa 999 (1054)
...+.++++++|++++++++ +||+.+ | +.+-..+|..++
T Consensus 106 p~~~~~~~~~l~~~~~~~~~-VgDs~~-D-i~~A~~aG~~~i 144 (181)
T PRK08942 106 PGMLLSIAERLNIDLAGSPM-VGDSLR-D-LQAAAAAGVTPV 144 (181)
T ss_pred HHHHHHHHHHcCCChhhEEE-EeCCHH-H-HHHHHHCCCeEE
Confidence 57788899999999999998 888888 8 888888886543
No 418
>PF14980 TIP39: TIP39 peptide
Probab=26.36 E-value=44 Score=26.34 Aligned_cols=15 Identities=40% Similarity=0.950 Sum_probs=12.1
Q ss_pred CchhhHHHHHHHhcC
Q 001557 4 NDWVNSYLEAILDVG 18 (1054)
Q Consensus 4 ~~~~~~~~~~~~~~~ 18 (1054)
-.|+|||..-+|-++
T Consensus 36 ~~WLnSYMqkLLv~~ 50 (51)
T PF14980_consen 36 QKWLNSYMQKLLVVN 50 (51)
T ss_pred HHHHHHHHHHHHccc
Confidence 369999999888654
No 419
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=26.34 E-value=69 Score=38.50 Aligned_cols=49 Identities=6% Similarity=-0.018 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEc
Q 001557 784 FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 837 (1054)
Q Consensus 784 i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~ 837 (1054)
+-+.+.++|+.|+++ |+.++|+|+.+...+...++.+++. .-||.++|.
T Consensus 331 l~pG~~e~L~~Lk~~----g~~l~IvS~~~~~~~~~~l~~~~l~-~~f~~i~~~ 379 (459)
T PRK06698 331 LYPNVKEIFTYIKEN----NCSIYIASNGLTEYLRAIVSYYDLD-QWVTETFSI 379 (459)
T ss_pred cCCCHHHHHHHHHHC----CCeEEEEeCCchHHHHHHHHHCCcH-hhcceeEec
Confidence 346678888999886 8999999999999999999999984 246776664
No 420
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=25.87 E-value=37 Score=33.83 Aligned_cols=42 Identities=17% Similarity=0.191 Sum_probs=34.1
Q ss_pred CCHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEE
Q 001557 955 ASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVI 999 (1054)
Q Consensus 955 asKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVa 999 (1054)
-.+..+.+.+++++|+++++++. +||+.. | +.+=..+|...+
T Consensus 133 Kp~~~~~~~~~~~~~~~p~~~~~-vgD~~~-d-~~~A~~~G~~~i 174 (176)
T PF13419_consen 133 KPDPDAYRRALEKLGIPPEEILF-VGDSPS-D-VEAAKEAGIKTI 174 (176)
T ss_dssp TTSHHHHHHHHHHHTSSGGGEEE-EESSHH-H-HHHHHHTTSEEE
T ss_pred hhHHHHHHHHHHHcCCCcceEEE-EeCCHH-H-HHHHHHcCCeEE
Confidence 34568999999999999999988 888886 8 888777776543
No 421
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=25.68 E-value=1.1e+02 Score=35.24 Aligned_cols=37 Identities=8% Similarity=-0.186 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhC-C
Q 001557 785 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSG-G 825 (1054)
Q Consensus 785 ~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l-~ 825 (1054)
.+.+.++|++++++ |+.++|+|.-+...+..+++.+ +
T Consensus 186 ~pgl~elL~~Lr~~----G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 186 DPKLPLFLSKLKEH----GKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred chhHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHhhC
Confidence 67788999999986 8999999999999999999986 5
No 422
>COG1887 TagB Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane]
Probab=25.35 E-value=1.1e+03 Score=27.66 Aligned_cols=164 Identities=14% Similarity=0.116 Sum_probs=91.7
Q ss_pred CCCCCcEEEEEeCCCCCC---C-----HHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCC
Q 001557 471 SNPRKPMILALARPDPKK---N-----ITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDL 542 (1054)
Q Consensus 471 ~~~~~~~Il~vgRld~~K---g-----i~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l 542 (1054)
.+.++++|++.-...+.. | ...-+.++.++ -...+.++|+-..+.... -..... ..
T Consensus 204 ~~~~k~vIlyaPTfr~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~ii~k~Hp~is~-----------~~~~~~--~~ 267 (388)
T COG1887 204 LPQDKKVILYAPTFRDNDVLIGTQFFNLDIDIEKLKEK---LGENEYVIIVKPHPLISD-----------KIDKRY--AL 267 (388)
T ss_pred CcccCceEEecCCccCCccccchhhhhhhhhHHHHHHh---hccCCeEEEEecChhhhh-----------hhhhhh--hc
Confidence 345789999988777665 2 22233333333 222456566655442111 011110 11
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccc---------cCcccceeeCCceE
Q 001557 543 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN---------GGPVDIHRVLDNGL 613 (1054)
Q Consensus 543 ~~~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~---------Gg~~eiv~~~~~Gl 613 (1054)
.+-+...-. ..++..+|..+ |++| --++-+..|+|..-.|||--.. |-..+. ....-|-
T Consensus 268 ~~~~~~vs~--~~di~dll~~s----DiLI-----TDySSv~fdf~~l~KPiify~~D~~~y~~~rg~~~d~-~~~~Pg~ 335 (388)
T COG1887 268 DDFVLDVSD--NADINDLLLVS----DILI-----TDYSSVIFDFMLLDKPIIFYTYDLEQYDELRGFYLDY-KFEAPGE 335 (388)
T ss_pred cceeEeccc--chhHHHHHhhh----CEEE-----eechHHHHHHHHhcCcEEEEecChHHHHhhhhhhhhH-HhcCCcc
Confidence 122222222 47999999999 9988 4678999999999999997532 111111 1123455
Q ss_pred EeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 001557 614 LVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRI 664 (1054)
Q Consensus 614 lv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~yl~~l 664 (1054)
++. +..++.++|.....+++...+..+...+....+.-....+++++.+
T Consensus 336 ~~~--~~~~li~ai~~~~~~~~~~~~k~~~~~~~~~~~~dg~ss~ri~~~i 384 (388)
T COG1887 336 VVE--TQEELIDAIKPYDEDGNYDLEKLRVFNDKFNSYEDGRSSERILKLI 384 (388)
T ss_pred ccc--cHHHHHHHHHhhhcccchhHHHHHHHHHhhcccccccHHHHHHHHH
Confidence 554 7889999999988865544443333333333333344555555544
No 423
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=25.30 E-value=1.5e+02 Score=38.09 Aligned_cols=55 Identities=15% Similarity=0.001 Sum_probs=50.1
Q ss_pred CCEEEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 001557 768 RKYVFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 826 (1054)
Q Consensus 768 ~kkLiv~DiDGTL------~~~i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l 826 (1054)
.+-.+.+.+||++ ..++.+....++..|++. |+.+++.||-....++...+++|+
T Consensus 702 g~tvv~v~vn~~l~gv~~l~D~vr~~a~~av~~Lk~~----Gi~v~mLTGDn~~aA~svA~~VGi 762 (951)
T KOG0207|consen 702 GQTVVYVAVNGQLVGVFALEDQVRPDAALAVAELKSM----GIKVVMLTGDNDAAARSVAQQVGI 762 (951)
T ss_pred CceEEEEEECCEEEEEEEeccccchhHHHHHHHHHhc----CceEEEEcCCCHHHHHHHHHhhCc
Confidence 4578889999999 477888999999999997 899999999999999999999997
No 424
>TIGR01088 aroQ 3-dehydroquinate dehydratase, type II. This model specifies the type II enzyme. The type I enzyme, often found as part of a multifunctional protein, is described by TIGR01093.
Probab=25.24 E-value=1.8e+02 Score=28.88 Aligned_cols=121 Identities=21% Similarity=0.267 Sum_probs=71.1
Q ss_pred CcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcC-CcEEEecCCCCCCcHHHH
Q 001557 507 ANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKT-KGVFINPAFIEPFGLTLI 585 (1054)
Q Consensus 507 ~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~-~dv~v~ps~~Egfgl~l~ 585 (1054)
||+- .+|.++.--.-...-+++...+.+.+.++++ .+.|..+=...++.+.++.|... -+++++|.-+--.+..+.
T Consensus 8 PNLN-lLG~REp~iYG~~tl~di~~~~~~~a~~~g~--~v~~~QSN~EGelId~i~~a~~~~dgiIINpga~THtSiAl~ 84 (141)
T TIGR01088 8 PNLN-MLGLREPGVYGSQTLEEIVEIIETFAAQLNV--ELEFFQSNSEGQLIDKIHEAEGQYDGIIINPGALTHTSVALR 84 (141)
T ss_pred CCcc-ccCCCCCCcCCCCCHHHHHHHHHHHHHHcCC--EEEEEeeCcHHHHHHHHHhccccCCEEEEcChHHhhhHHHHH
Confidence 4442 3466553222223445667777788887775 36665554455788888877443 247788987888889999
Q ss_pred HHHHc-CCCEEEcccc--Cccc------ceeeCCceEEeCCCCHHHHHHHHHHHH
Q 001557 586 EAAAY-GLPIVATKNG--GPVD------IHRVLDNGLLVDPHDQQSIADALLKLV 631 (1054)
Q Consensus 586 EAmA~-G~PVIat~~G--g~~e------iv~~~~~Gllv~p~d~~~la~aI~~ll 631 (1054)
.|++. ++|+|=--.. -.+| ++..-..|.+.- .-.+...-||..++
T Consensus 85 DAl~~~~~P~vEVHiSNi~aRE~fR~~S~is~~~~G~I~G-~G~~gY~lAl~a~~ 138 (141)
T TIGR01088 85 DALAAVSLPVVEVHLSNVHAREEFRHHSYTAPVAGGVIVG-LGAQGYLLALRYLV 138 (141)
T ss_pred HHHHcCCCCEEEEEcCCccccccccccccccccceEEEee-cCHHHHHHHHHHHH
Confidence 99876 8998743321 1122 222223455543 24455555665554
No 425
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=25.15 E-value=2.5e+02 Score=32.17 Aligned_cols=100 Identities=13% Similarity=0.116 Sum_probs=60.0
Q ss_pred CcEEEEEe-CCCCCCCHH--HHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001557 475 KPMILALA-RPDPKKNIT--TLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKH 551 (1054)
Q Consensus 475 ~~~Il~vg-Rld~~Kgi~--~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~ 551 (1054)
+.+++..| .-...|+.+ ...+..+.+.+ ...++ ++.|+.++ .+..+++.+.+.- .+.+.|.
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~--~~~~V-vl~g~~~e-----------~e~~~~i~~~~~~--~~~l~~k 239 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIA--KGYQV-VLFGGPDE-----------EERAEEIAKGLPN--AVILAGK 239 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHH--CCCEE-EEecChHH-----------HHHHHHHHHhcCC--ccccCCC
Confidence 34456666 444667655 45555555543 22344 34455433 2334445544431 2227888
Q ss_pred CCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEccc
Q 001557 552 HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN 599 (1054)
Q Consensus 552 ~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~~ 599 (1054)
.+-.++.+++..| |++|-+. . |+ +-=|.|.|+|+|+--.
T Consensus 240 ~sL~e~~~li~~a----~l~I~~D---S-g~-~HlAaA~~~P~I~iyg 278 (334)
T COG0859 240 TSLEELAALIAGA----DLVIGND---S-GP-MHLAAALGTPTIALYG 278 (334)
T ss_pred CCHHHHHHHHhcC----CEEEccC---C-hH-HHHHHHcCCCEEEEEC
Confidence 8889999999999 9988663 2 22 3347888999999653
No 426
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=25.10 E-value=2.9e+02 Score=32.56 Aligned_cols=85 Identities=11% Similarity=0.002 Sum_probs=57.4
Q ss_pred HHHHHHHcCCCEEEccc---cCcccceeeCCceEEeCC-CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHH
Q 001557 583 TLIEAAAYGLPIVATKN---GGPVDIHRVLDNGLLVDP-HDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHC 657 (1054)
Q Consensus 583 ~l~EAmA~G~PVIat~~---Gg~~eiv~~~~~Gllv~p-~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a 657 (1054)
.+.--|+||-.|+.... .-..+.+....+=+-|.. .+..+|.++|..+.+++++.++++++|.+.+ +..+.+...
T Consensus 229 RlkylL~c~SvVl~~~~~~~e~f~~~L~P~vHYVPV~~~~d~sdL~~~v~w~~~~~~~A~~IA~~g~~f~~~~L~~~~~~ 308 (395)
T PF05686_consen 229 RLKYLLACNSVVLKVKSPYYEFFYRALKPWVHYVPVKRDDDLSDLEEKVEWLNAHDDEAQRIAENGQRFAREYLTMEDVY 308 (395)
T ss_pred hHHHHHcCCceEEEeCCcHHHHHHhhhcccccEEEeccccchhhHHHHhhhcccChHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 34555777776666432 112222334445566654 4789999999999999999999999999998 577777766
Q ss_pred HHHHHHHHHh
Q 001557 658 KSYLSRISSC 667 (1054)
Q Consensus 658 ~~yl~~l~~~ 667 (1054)
.-+..++.+-
T Consensus 309 ~Y~~~LL~eY 318 (395)
T PF05686_consen 309 CYWRRLLLEY 318 (395)
T ss_pred HHHHHHHHHH
Confidence 5555555443
No 427
>PRK06769 hypothetical protein; Validated
Probab=25.05 E-value=1.2e+02 Score=31.06 Aligned_cols=41 Identities=27% Similarity=0.280 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEe
Q 001557 957 RSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVIL 1000 (1054)
Q Consensus 957 Kg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaM 1000 (1054)
+..-+...++++|++++++++ +||+.. | +..=+.+|..++.
T Consensus 95 ~p~~~~~~~~~l~~~p~~~i~-IGD~~~-D-i~aA~~aGi~~i~ 135 (173)
T PRK06769 95 STGMLLQAAEKHGLDLTQCAV-IGDRWT-D-IVAAAKVNATTIL 135 (173)
T ss_pred CHHHHHHHHHHcCCCHHHeEE-EcCCHH-H-HHHHHHCCCeEEE
Confidence 456778889999999999988 888876 8 8777778865543
No 428
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=24.95 E-value=44 Score=33.92 Aligned_cols=24 Identities=4% Similarity=0.023 Sum_probs=0.0
Q ss_pred EEEEEecCCC---ChhhHHHHHHHHHH
Q 001557 771 VFVIAADCDT---TSDFLEIIKKVVEA 794 (1054)
Q Consensus 771 Liv~DiDGTL---~~~i~~~~~~al~~ 794 (1054)
+|+||+|||| .........+++..
T Consensus 1 ~viFD~DGTL~D~~~~~~~~~~~~~~~ 27 (175)
T TIGR01493 1 AMVFDVYGTLVDVHGGVRACLAAIAPE 27 (175)
T ss_pred CeEEecCCcCcccHHHHHHHHHHhhhh
No 429
>PLN02940 riboflavin kinase
Probab=24.64 E-value=76 Score=37.21 Aligned_cols=49 Identities=8% Similarity=0.155 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHH-hCCCCCCCCcEEEEcC
Q 001557 785 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLV-SGGLSPLAFDAFICNS 838 (1054)
Q Consensus 785 ~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~-~l~l~~~~~d~lI~~n 838 (1054)
-+.+.++|+.|++. |+.++|+|+.+...+...++ ..++. .-||.++|+.
T Consensus 95 ~pGv~elL~~Lk~~----g~~l~IvTn~~~~~~~~~l~~~~gl~-~~Fd~ii~~d 144 (382)
T PLN02940 95 LPGANRLIKHLKSH----GVPMALASNSPRANIEAKISCHQGWK-ESFSVIVGGD 144 (382)
T ss_pred CcCHHHHHHHHHHC----CCcEEEEeCCcHHHHHHHHHhccChH-hhCCEEEehh
Confidence 45668888899886 89999999999999888887 67774 3467777743
No 430
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=24.57 E-value=44 Score=37.41 Aligned_cols=41 Identities=15% Similarity=0.073 Sum_probs=35.3
Q ss_pred HHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEec
Q 001557 958 SQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 1001 (1054)
Q Consensus 958 g~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMg 1001 (1054)
...+..+++++|++++++++ +||+.+ | +++=+.+|..++.-
T Consensus 205 p~~~~~a~~~~~~~p~~~l~-IGDs~~-D-i~aA~~aG~~~i~v 245 (286)
T PLN02779 205 PDIYNLAAETLGVDPSRCVV-VEDSVI-G-LQAAKAAGMRCIVT 245 (286)
T ss_pred HHHHHHHHHHhCcChHHEEE-EeCCHH-h-HHHHHHcCCEEEEE
Confidence 55889999999999999999 889988 8 99999999776644
No 431
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=24.55 E-value=1e+02 Score=32.52 Aligned_cols=37 Identities=24% Similarity=0.380 Sum_probs=28.4
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHhHHHHHHHHHHhcCCCceEEEEEecCc
Q 001557 166 LYIVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQV 220 (1054)
Q Consensus 166 mkIllis~h~~~r~~~~elg~~~~tGG~~~~v~eLa~aLa~~~Gv~~V~vvt~~~ 220 (1054)
||||+.+--|+ ....+..|+++|++. | |+|.|+++..
T Consensus 1 M~ILlTNDDGi----------------~a~Gi~aL~~~L~~~-g-~~V~VvAP~~ 37 (196)
T PF01975_consen 1 MRILLTNDDGI----------------DAPGIRALAKALSAL-G-HDVVVVAPDS 37 (196)
T ss_dssp SEEEEE-SS-T----------------TSHHHHHHHHHHTTT-S-SEEEEEEESS
T ss_pred CeEEEEcCCCC----------------CCHHHHHHHHHHHhc-C-CeEEEEeCCC
Confidence 89999986443 345677899999888 7 9999999864
No 432
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=24.50 E-value=1e+02 Score=30.36 Aligned_cols=44 Identities=14% Similarity=0.048 Sum_probs=33.5
Q ss_pred HHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEE
Q 001557 787 IIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFIC 836 (1054)
Q Consensus 787 ~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~ 836 (1054)
.+.++|+.|+++ |+.++|+|+.+...+..+++.+ +. ..|+.++|
T Consensus 68 g~~e~l~~L~~~----g~~~~i~T~~~~~~~~~~~~~~-l~-~~f~~i~~ 111 (154)
T TIGR01549 68 GAADLLKRLKEA----GIKLGIISNGSLRAQKLLLRKH-LG-DYFDLILG 111 (154)
T ss_pred CHHHHHHHHHHC----cCeEEEEeCCchHHHHHHHHHH-HH-hcCcEEEe
Confidence 367888888875 8999999999999999888885 42 22455554
No 433
>PRK09449 dUMP phosphatase; Provisional
Probab=24.03 E-value=89 Score=33.14 Aligned_cols=47 Identities=17% Similarity=0.050 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEc
Q 001557 785 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 837 (1054)
Q Consensus 785 ~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~ 837 (1054)
-+.+.++|+.|+ + |+.++|+|.-+...+...++.+|+. .-||.++++
T Consensus 97 ~~g~~~~L~~L~-~----~~~~~i~Tn~~~~~~~~~l~~~~l~-~~fd~v~~~ 143 (224)
T PRK09449 97 LPGAVELLNALR-G----KVKMGIITNGFTELQQVRLERTGLR-DYFDLLVIS 143 (224)
T ss_pred CccHHHHHHHHH-h----CCeEEEEeCCcHHHHHHHHHhCChH-HHcCEEEEE
Confidence 456688888888 4 5889999998888888899999884 346777764
No 434
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=23.48 E-value=1.1e+02 Score=32.32 Aligned_cols=47 Identities=17% Similarity=0.075 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEc
Q 001557 785 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 837 (1054)
Q Consensus 785 ~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~ 837 (1054)
-+.+.++|+++++ . +.++|+|+.+...+...++.+++. .-||.++|+
T Consensus 99 ~~g~~~~L~~l~~----~-~~~~i~Sn~~~~~~~~~l~~~~l~-~~fd~i~~~ 145 (224)
T TIGR02254 99 LPGAFELMENLQQ----K-FRLYIVTNGVRETQYKRLRKSGLF-PFFDDIFVS 145 (224)
T ss_pred CccHHHHHHHHHh----c-CcEEEEeCCchHHHHHHHHHCCcH-hhcCEEEEc
Confidence 4456777888876 3 789999999999999999999985 346766664
No 435
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=22.94 E-value=4.9e+02 Score=28.73 Aligned_cols=86 Identities=12% Similarity=0.047 Sum_probs=53.4
Q ss_pred HHHHcCCCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCC--CCcHHHHHHHHcCCCEEEccccCcccceeeCCc
Q 001557 536 LIDKYDLYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIE--PFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDN 611 (1054)
Q Consensus 536 l~~~~~l~~--~V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~E--gfgl~l~EAmA~G~PVIat~~Gg~~eiv~~~~~ 611 (1054)
.+.++|+.+ .+..-|.++.+.=.++++.. ..|++|.=-..+ |+--++--|..+|+|||.-.-+..+. .
T Consensus 166 ~~~~~G~~~~~iia~~gPfs~e~n~al~~~~--~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~~------~ 237 (256)
T TIGR00715 166 QALKLGFPSDRIIAMRGPFSEELEKALLREY--RIDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQTIP------G 237 (256)
T ss_pred HHHHcCCChhcEEEEeCCCCHHHHHHHHHHc--CCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCCC------C
Confidence 566666643 46677777766666777766 236655433333 45556777788899999987764311 1
Q ss_pred eEEeCCCCHHHHHHHHHHHH
Q 001557 612 GLLVDPHDQQSIADALLKLV 631 (1054)
Q Consensus 612 Gllv~p~d~~~la~aI~~ll 631 (1054)
...+ .+.+++.+.+.+++
T Consensus 238 ~~~~--~~~~el~~~l~~~~ 255 (256)
T TIGR00715 238 VAIF--DDISQLNQFVARLL 255 (256)
T ss_pred CccC--CCHHHHHHHHHHhc
Confidence 1233 37788877777654
No 436
>cd00466 DHQase_II Dehydroquinase (DHQase), type II. Dehydroquinase (or 3-dehydroquinate dehydratase) catalyzes the reversible dehydration of 3-dehydroquinate to form 3-dehydroshikimate. This reaction is part of two metabolic pathways: the biosynthetic shikimate pathway and the catabolic quinate pathway. There are two types of DHQases, which are distinct from each other in amino acid sequence and three-dimensional structure. Type I enzymes usually catalyze the biosynthetic reaction using a syn elimination mechanism. In contrast, type II enzymes, found in the quinate pathway of fungi and in the shikimate pathway of many bacteria, are dodecameric enzymes that employ an anti elimination reaction mechanism.
Probab=22.88 E-value=1.9e+02 Score=28.71 Aligned_cols=121 Identities=18% Similarity=0.267 Sum_probs=71.3
Q ss_pred CcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCC-cEEEecCCCCCCcHHHH
Q 001557 507 ANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTK-GVFINPAFIEPFGLTLI 585 (1054)
Q Consensus 507 ~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~Aa~~~-dv~v~ps~~Egfgl~l~ 585 (1054)
||+- .+|.++.--.-...-.++...+.+.+.++++ .+.|..+=...++.+.++.|.... .++++|.-+--.+..+.
T Consensus 8 PNLN-~LG~Rep~iYG~~tl~~i~~~l~~~a~~~g~--~v~~~QSN~Egelid~I~~a~~~~dgiIINpga~THtSvAi~ 84 (140)
T cd00466 8 PNLN-LLGKREPEIYGTTTLADIEALLRELAAELGV--EVEFFQSNHEGELIDWIHEARDGADGIIINPGAYTHTSIALR 84 (140)
T ss_pred CCcc-ccCCCCCCcCCcCCHHHHHHHHHHHHHHcCC--EEEEEeeCcHHHHHHHHHHhhccCcEEEEcchHHHHHHHHHH
Confidence 4442 3466553222233345677778888887776 466655544567888887775433 47788877777888999
Q ss_pred HHHHc-CCCEEEccccC--ccc------ceeeCCceEEeCCCCHHHHHHHHHHHH
Q 001557 586 EAAAY-GLPIVATKNGG--PVD------IHRVLDNGLLVDPHDQQSIADALLKLV 631 (1054)
Q Consensus 586 EAmA~-G~PVIat~~Gg--~~e------iv~~~~~Gllv~p~d~~~la~aI~~ll 631 (1054)
.|+++ ++|+|=--... .+| ++..-..|.+.- .-.+...-||..++
T Consensus 85 DAl~~~~~P~VEVHiSNi~aRE~fR~~S~is~~~~G~I~G-~G~~gY~lAl~~~~ 138 (140)
T cd00466 85 DALAAVSIPVIEVHISNIHAREEFRHHSVISPVATGVIAG-LGADGYRLALEALA 138 (140)
T ss_pred HHHHcCCCCEEEEecCCcccccccccccccccceeEEEEe-CCHHHHHHHHHHHH
Confidence 99877 88987533221 122 222223455543 34556666666554
No 437
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=22.84 E-value=1e+02 Score=31.44 Aligned_cols=47 Identities=28% Similarity=0.263 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEc
Q 001557 784 FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 837 (1054)
Q Consensus 784 i~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~ 837 (1054)
+.+.+.++|++|+++ |+.++|+|+... ....++.+++. ..||.++++
T Consensus 88 ~~pg~~~~L~~L~~~----g~~~~i~s~~~~--~~~~l~~~~l~-~~f~~~~~~ 134 (185)
T TIGR01990 88 VLPGIKNLLDDLKKN----NIKIALASASKN--APTVLEKLGLI-DYFDAIVDP 134 (185)
T ss_pred cCccHHHHHHHHHHC----CCeEEEEeCCcc--HHHHHHhcCcH-hhCcEEEeh
Confidence 356778889999886 899999998653 35678888885 346766653
No 438
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=22.29 E-value=78 Score=35.41 Aligned_cols=43 Identities=23% Similarity=0.213 Sum_probs=31.5
Q ss_pred HHHHHHHHhCCCccCEEEEeCcCCCccccccccCcce-EEEecCcc
Q 001557 960 ALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHK-TVILKGVG 1004 (1054)
Q Consensus 960 AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~-gVaMgNa~ 1004 (1054)
...+|.++++|+++.++. +||.-||| +-.=+.+|. ++.|--++
T Consensus 229 m~~~l~~~~~i~psRt~m-vGDRL~TD-IlFG~~~G~~TLLvltGv 272 (306)
T KOG2882|consen 229 MFEYLLEKFNIDPSRTCM-VGDRLDTD-ILFGKNCGFKTLLVLSGV 272 (306)
T ss_pred HHHHHHHHcCCCcceEEE-Ecccchhh-hhHhhccCcceEEEecCc
Confidence 356789999999999988 99999988 433334453 56665555
No 439
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=22.28 E-value=1.1e+02 Score=31.48 Aligned_cols=34 Identities=21% Similarity=0.373 Sum_probs=25.2
Q ss_pred EEEEecCCCCHHHHHHHHHHHhCCCccCEEEEeCcCC
Q 001557 947 KLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECG 983 (1054)
Q Consensus 947 ~lEV~p~~asKg~AL~~L~~~~gI~~e~vvaf~GD~~ 983 (1054)
++||-|. ||-+=++.|.+..||+.++|+. |||..
T Consensus 101 ~~eI~~g--sK~~Hf~~i~~~tgI~y~eMlF-FDDe~ 134 (169)
T PF12689_consen 101 YLEIYPG--SKTTHFRRIHRKTGIPYEEMLF-FDDES 134 (169)
T ss_dssp EEEESSS---HHHHHHHHHHHH---GGGEEE-EES-H
T ss_pred hhheecC--chHHHHHHHHHhcCCChhHEEE-ecCch
Confidence 6999995 9999999999999999999766 66654
No 440
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=21.85 E-value=51 Score=40.05 Aligned_cols=39 Identities=18% Similarity=0.320 Sum_probs=30.8
Q ss_pred CHHHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEEec
Q 001557 956 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 1001 (1054)
Q Consensus 956 sKg~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVaMg 1001 (1054)
.|..-++.+.+. | ..++++||+-| | ..||..++.||+|+
T Consensus 394 ~K~~~v~~l~~~-g----~~v~~vGDg~n-D-~~al~~Advgia~~ 432 (499)
T TIGR01494 394 EKAALVEALQKK-G----RVVAMTGDGVN-D-APALKKADVGIAMG 432 (499)
T ss_pred HHHHHHHHHHHC-C----CEEEEECCChh-h-HHHHHhCCCccccc
Confidence 577777766432 3 45666999999 9 99999999999997
No 441
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=21.69 E-value=5.5e+02 Score=28.36 Aligned_cols=111 Identities=13% Similarity=0.080 Sum_probs=63.9
Q ss_pred EEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhchHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHH
Q 001557 480 ALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPD 559 (1054)
Q Consensus 480 ~vgRld~~Kgi~~ll~A~~~l~~~~~~~~l~LIiG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ 559 (1054)
+++.+.--...+.+++....+.+....-....+.=++........-..+-+..+.+.+.++|+. .+.-.++..++..
T Consensus 28 ~IAGpc~ie~~~~~~~~A~~lk~~~~k~~r~~~~KpRtsp~s~~g~g~~gl~~l~~~~~~~Gl~---~~t~~~d~~~~~~ 104 (260)
T TIGR01361 28 VIAGPCSVESEEQIMETARFVKEAGAKILRGGAFKPRTSPYSFQGLGEEGLKLLRRAADEHGLP---VVTEVMDPRDVEI 104 (260)
T ss_pred EEEeCCccCCHHHHHHHHHHHHHHHHHhccCceecCCCCCccccccHHHHHHHHHHHHHHhCCC---EEEeeCChhhHHH
Confidence 3555666677788888887775322110000111122211111111133456677778888763 2333445566777
Q ss_pred HHHHhhcCCcEEEecCCCCCCcHHHHHHHHc-CCCEEEcc
Q 001557 560 IYRLAAKTKGVFINPAFIEPFGLTLIEAAAY-GLPIVATK 598 (1054)
Q Consensus 560 ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~-G~PVIat~ 598 (1054)
+...+ |++-+||. +-.+..+++++|. |+||+.+.
T Consensus 105 l~~~~----d~lkI~s~-~~~n~~LL~~~a~~gkPVilk~ 139 (260)
T TIGR01361 105 VAEYA----DILQIGAR-NMQNFELLKEVGKQGKPVLLKR 139 (260)
T ss_pred HHhhC----CEEEECcc-cccCHHHHHHHhcCCCcEEEeC
Confidence 76666 99888875 6667778887776 99998775
No 442
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=21.01 E-value=3.4e+02 Score=31.02 Aligned_cols=44 Identities=14% Similarity=0.058 Sum_probs=33.3
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCcHHHHHHHHcCCCEEEcc
Q 001557 546 VAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK 598 (1054)
Q Consensus 546 V~~~g~~~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~l~EAmA~G~PVIat~ 598 (1054)
+.+.|..+-.++.++++.| +++|-.- . -.+-=|.|.|+|+|+-.
T Consensus 244 ~~l~g~~sL~el~ali~~a----~l~I~nD---T--Gp~HlAaA~g~P~valf 287 (348)
T PRK10916 244 RNLAGETQLEQAVILIAAC----KAIVTND---S--GLMHVAAALNRPLVALY 287 (348)
T ss_pred eeccCCCCHHHHHHHHHhC----CEEEecC---C--hHHHHHHHhCCCEEEEE
Confidence 5567877888999999999 8988652 2 23344788899999854
No 443
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=20.97 E-value=1.6e+02 Score=31.40 Aligned_cols=47 Identities=6% Similarity=0.002 Sum_probs=34.3
Q ss_pred HHHHHHHHH-HHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEc
Q 001557 785 LEIIKKVVE-AAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 837 (1054)
Q Consensus 785 ~~~~~~al~-~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~ 837 (1054)
-+...+.|+ .++++ |+.++|+|+-+...+.++.+..++- ..+.+||.
T Consensus 96 ~pga~e~L~~~l~~~----G~~v~IvSas~~~~~~~ia~~~~~~--~~~~~i~t 143 (210)
T TIGR01545 96 FPLVAERLRQYLESS----DADIWLITGSPQPLVEAVYFDSNFI--HRLNLIAS 143 (210)
T ss_pred CccHHHHHHHHHHhC----CCEEEEEcCCcHHHHHHHHHhcccc--ccCcEEEE
Confidence 455677785 56655 8999999999999999999886551 12456653
No 444
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=20.75 E-value=75 Score=32.19 Aligned_cols=39 Identities=3% Similarity=0.010 Sum_probs=32.2
Q ss_pred HHHHHHHHHHhCCCccCEEEEeCcCCCccccccccCcceEEE
Q 001557 958 SQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVI 999 (1054)
Q Consensus 958 g~AL~~L~~~~gI~~e~vvaf~GD~~d~D~~eML~~ag~gVa 999 (1054)
....+.+++++|++++++++ +||+.. | +.+=+.+|...+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~-vgD~~~-d-i~aA~~~G~~~i 181 (183)
T TIGR01509 143 PDIYLLALKKLGLKPEECLF-VDDSPA-G-IEAAKAAGMHTV 181 (183)
T ss_pred HHHHHHHHHHcCCCcceEEE-EcCCHH-H-HHHHHHcCCEEE
Confidence 67888999999999999988 888887 8 887777776443
No 445
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=20.68 E-value=5.8e+02 Score=27.29 Aligned_cols=59 Identities=17% Similarity=0.097 Sum_probs=37.7
Q ss_pred hhhhHHHHHHhhccccCCCccCccCccCCCCCcccCCCEEEEEEecCCC-ChhhHHHHHHHHHHHhccCCCCceEEEEEc
Q 001557 732 KNKLENAVLALSNRTIGGTQKADHNVASGKFPALRRRKYVFVIAADCDT-TSDFLEIIKKVVEAAGKDNSAGFIGFVLST 810 (1054)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~kkLiv~DiDGTL-~~~i~~~~~~al~~l~~~~~~~gi~fvIaT 810 (1054)
...+..++..++.+.. ..+-|.|++++|+-. .-.-.+++.++|+.+++. +.-.++.+.
T Consensus 28 ~~~~~~l~~~l~~a~~------------------d~~ik~vvL~~~s~gg~~~~~~el~~~i~~~~~~---~kpVia~~~ 86 (222)
T cd07018 28 ELSLRDLLEALEKAAE------------------DDRIKGIVLDLDGLSGGLAKLEELRQALERFRAS---GKPVIAYAD 86 (222)
T ss_pred CccHHHHHHHHHHHhc------------------CCCeEEEEEECCCCCCCHHHHHHHHHHHHHHHHh---CCeEEEEeC
Confidence 3455667777765443 134589999999877 444567788888888754 233444554
Q ss_pred C
Q 001557 811 A 811 (1054)
Q Consensus 811 G 811 (1054)
|
T Consensus 87 ~ 87 (222)
T cd07018 87 G 87 (222)
T ss_pred C
Confidence 3
No 446
>PF08496 Peptidase_S49_N: Peptidase family S49 N-terminal; InterPro: IPR013703 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain is found to the N terminus of bacterial signal peptidases that belong to the MEROPS peptidase family S49 (protease IV family, clan SK) (see also IPR002142 from INTERPRO) [, ]. ; GO: 0004252 serine-type endopeptidase activity, 0005886 plasma membrane
Probab=20.63 E-value=1.5e+02 Score=29.98 Aligned_cols=16 Identities=19% Similarity=0.326 Sum_probs=13.7
Q ss_pred CCCEEEEEEecCCCCh
Q 001557 767 RRKYVFVIAADCDTTS 782 (1054)
Q Consensus 767 ~~kkLiv~DiDGTL~~ 782 (1054)
.+++++|+|+||++..
T Consensus 96 ~~~r~~VldF~Gdi~A 111 (155)
T PF08496_consen 96 PKPRLFVLDFKGDIKA 111 (155)
T ss_pred CCCeEEEEecCCCccH
Confidence 5679999999999953
No 447
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=20.20 E-value=1.3e+02 Score=31.40 Aligned_cols=48 Identities=17% Similarity=0.108 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCcEEEEcC
Q 001557 785 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNS 838 (1054)
Q Consensus 785 ~~~~~~al~~l~~~~~~~gi~fvIaTGR~~~~i~~~l~~l~l~~~~~d~lI~~n 838 (1054)
-+.+.++|+.|++. |+.++|+|+-+. .+...++.+++. .-||.++++.
T Consensus 107 ~~g~~~~l~~L~~~----g~~~~i~Sn~~~-~~~~~l~~~~l~-~~fd~i~~s~ 154 (203)
T TIGR02252 107 YPDAIKLLKDLRER----GLILGVISNFDS-RLRGLLEALGLL-EYFDFVVTSY 154 (203)
T ss_pred CcCHHHHHHHHHHC----CCEEEEEeCCch-hHHHHHHHCCcH-HhcceEEeec
Confidence 45678888999876 888999998765 457888888874 2366666543
No 448
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=20.16 E-value=1.5e+02 Score=30.32 Aligned_cols=68 Identities=21% Similarity=0.309 Sum_probs=43.2
Q ss_pred CCCCCccHHHHHHHHHHhcCeEEEEEeeCC-eE---------EEEecCCCCH--HHHHHHHHHHhCCCccCEEEEeCcCC
Q 001557 916 NPQMIPPVKELRKLMRIQALRCHVIYCQNG-TK---------LHVIPVLASR--SQALRYLHVRWGIDLSNVVVIAGECG 983 (1054)
Q Consensus 916 ~~~~~~~~~el~~~l~~~~~~~~v~~s~~~-~~---------lEV~p~~asK--g~AL~~L~~~~gI~~e~vvaf~GD~~ 983 (1054)
+++..+.+.+.-..++..+..+-++ |.+. +. ++.+ .+|-| +.|++.-++.+++++++|++ +||.-
T Consensus 44 ~~~~tpe~~~W~~e~k~~gi~v~vv-SNn~e~RV~~~~~~l~v~fi-~~A~KP~~~~fr~Al~~m~l~~~~vvm-VGDqL 120 (175)
T COG2179 44 NPDATPELRAWLAELKEAGIKVVVV-SNNKESRVARAAEKLGVPFI-YRAKKPFGRAFRRALKEMNLPPEEVVM-VGDQL 120 (175)
T ss_pred CCCCCHHHHHHHHHHHhcCCEEEEE-eCCCHHHHHhhhhhcCCcee-ecccCccHHHHHHHHHHcCCChhHEEE-Ecchh
Confidence 4555565555556666666555333 3221 11 2222 12223 68899999999999999999 99988
Q ss_pred Ccc
Q 001557 984 DTD 986 (1054)
Q Consensus 984 d~D 986 (1054)
=||
T Consensus 121 ~TD 123 (175)
T COG2179 121 FTD 123 (175)
T ss_pred hhh
Confidence 877
Done!