BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001560
(1052 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FNP1|PEX1_ARATH Peroxisome biogenesis protein 1 OS=Arabidopsis thaliana GN=PEX1 PE=2
SV=2
Length = 1130
Score = 1098 bits (2840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/1056 (57%), Positives = 747/1056 (70%), Gaps = 70/1056 (6%)
Query: 1 MELE--VRVVGGVENCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVVAWSGA 58
ME E V V GV +CFVSLP +L+ L+ST S+ L +L +ELRS ++RW VAWSG+
Sbjct: 14 METEAVVNTVAGV-DCFVSLPRQLLHALQSTSSSPLP-PLLPVELRS-GDRRWSVAWSGS 70
Query: 59 TSSSSFIEVARQFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAE 118
+SSSS IE+AR FAE ISL D T+V+VRV+ NV KATLVT+EP TEDDWEVLELN+E AE
Sbjct: 71 SSSSSAIEIARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWEVLELNAELAE 130
Query: 119 AAILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRKNNVK 178
AAIL+QVRI+HE M+FPLWLH RT+I F VVSTFP K VVQLVPGTEVAVAPKRR N+K
Sbjct: 131 AAILSQVRILHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRRDRNLK 190
Query: 179 KHEDSYMQAFNESTSIAKALLRVQDSDEGLSHKCNVKGVELGVALTSVAFINPETAENVS 238
+ + N KALLRVQ++D H+ +VKG EL VALTS+A+I+PETA+ S
Sbjct: 191 AKKSQEKECNN-----VKALLRVQETDRSAFHEADVKGFELRVALTSIAYIHPETAKKHS 245
Query: 239 LCSLELVAILPRLSSKENNPENNAPRIKSNLTSKEISGGASTDKKECRQAVVHLLFSDSV 298
L SL+L+++ PR+ K + ++ A +K++ SK G S+ KKE RQA++ L+FSD
Sbjct: 246 LESLQLISVSPRIPLKGSAKKDEALNMKNSEASKVAENGTSSAKKEPRQAILRLVFSDLA 305
Query: 299 AKGHVKIARALRLYLNAGLHSWVYLKKCTVNLKKEIPMVSLSPCHFKMLEKDKAFGIGLE 358
AKGH+ + +LRLYL AGLHSWVYL+ C VN KEIP +SLSPC FK+ E +K G +
Sbjct: 306 AKGHLMMVESLRLYLGAGLHSWVYLRGCNVNEDKEIPALSLSPCVFKISENEKVLDKGTD 365
Query: 359 -LDNKNHKTKKMLEKTSSGIYMDDGDLSAEDDIIAALSSEPSSKEDEEAVYQFENKKGLE 417
L N N K + Y+D D S D ++ ALSSE E +NKKGLE
Sbjct: 366 RLGNNNSVRKSSHPPSGLSTYVDVVDWSVHDKVVTALSSEGLHDEGNHD----KNKKGLE 421
Query: 418 CLLHTWLLAQLTAVASNIGSEFNTLVLSNETLLHFEVKGYKSGTYGKVPASCNGALENKT 477
L W LAQL A+AS G + ++L++ ET HFEV+G +S S N E+
Sbjct: 422 YLTRLWSLAQLDAMASVTGVDVSSLIVGRETFFHFEVRGLESYKSIDGQPSVNDRWESGK 481
Query: 478 KARELRTEIFCVLTFSEESLHGGKNNAYELTLEARGQQNNNTEAVRQLFGKLNSGDSVSF 537
K + EI V+T S+ESL G K Y+L+L+ R ++++N + + K+N G+ +
Sbjct: 482 KDKHTPLEILYVMTVSDESLLGDKFAGYDLSLD-RSEKSDNVVHIEPVLEKMNLGEPIYL 540
Query: 538 YTVKERGSTQGFDSNVSSLSWMGTTASDVINRIKVLLSPDSGLWFSTYHLPLPGHILIHG 597
+ KE +G ++SSL+WMG SDVI R+ VLLSP +G+WFS + +P PGHILI+G
Sbjct: 541 KSAKETHCNKGVSPDISSLTWMGPIVSDVIKRMTVLLSPAAGMWFSKFKIPSPGHILIYG 600
Query: 598 PPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDHAPS 657
PPGSGKT LA+A AK E KDL+AH++ V CS L+LEK I LS+ I+E L+HAPS
Sbjct: 601 PPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAEGLEHAPS 660
Query: 658 IVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQ 717
++I D+LDSIISSSSD EG+Q S V LTKFL D++D+YGE R SSCGIGP+AFVAS Q
Sbjct: 661 VIILDDLDSIISSSSDTEGTQASVGVTMLTKFLTDVIDDYGEYRNSSCGIGPLAFVASVQ 720
Query: 718 SLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASKCDGYD 777
SLE+IPQ+L+SSGRFDFHVQL APA SER AIL+HEIQ+R L+CS++ILL++A+KC+GYD
Sbjct: 721 SLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLDCSEDILLNLAAKCEGYD 780
Query: 778 AYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMRDITKTSAE 837
AYDLEILVDR VHAA+GR+L +S+ K+ LV++DF++AMH+F+PVAMRDITK+++E
Sbjct: 781 AYDLEILVDRAVHAAIGRHLPLESNISKY---NLVKEDFTRAMHDFVPVAMRDITKSASE 837
Query: 838 GGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGA 897
GGR GW+DVGG+TDI+NAIKEMIELPSKFP IFA++PLRLRSNVLLYGPPGCGKTHIVGA
Sbjct: 838 GGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGA 897
Query: 898 AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDN 957
AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKA AAAPC+LFFDEFDSIAPKRGHDN
Sbjct: 898 AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDN 957
Query: 958 TGVTDRVVNQVSSTSYLFIIYFWEVGKKEGVVPYDIYILVNFLISACPCFQQFLTELDGV 1017
TGVTDRVVN QFLTELDGV
Sbjct: 958 TGVTDRVVN------------------------------------------QFLTELDGV 975
Query: 1018 EVLTGVFVFAATR---------LEFFHYNVLLFCSF 1044
EVLTGVFVFAAT L + LL C F
Sbjct: 976 EVLTGVFVFAATSRPDLLDPALLRPGRLDRLLLCDF 1011
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 111/261 (42%), Gaps = 42/261 (16%)
Query: 564 SDVINRIKVLLSPDSGL--WFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLV 621
+D+ N IK ++ S F+ L L ++L++GPPG GKT + A A +
Sbjct: 850 TDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAA-------- 901
Query: 622 AHIVFVCCSRLSLEKGPII--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSD 673
C R KGP + QA+ + S+A AP I+ FD DSI
Sbjct: 902 ------CSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIA----- 950
Query: 674 PEGSQPSTSVI--ALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGR 731
P+ +T V + +FL ++ G F A+++ + + +L GR
Sbjct: 951 PKRGHDNTGVTDRVVNQFLTEL-------DGVEVLTGVFVFAATSRP-DLLDPALLRPGR 1002
Query: 732 FDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD-VASKCDGYDAYDLEILVDRTVH 790
D + P+ ER IL + R L +D+I L+ +A +G+ DL+ L+
Sbjct: 1003 LDRLLLCDFPSPPERLEILT--VLSRKLLMADDIDLEPIALMTEGFSGADLQALLSDAQL 1060
Query: 791 AAVGRYLHSDSSFEKHIKPTL 811
AAV YL+ + E P +
Sbjct: 1061 AAVHEYLNREDKPETGTTPII 1081
>sp|O43933|PEX1_HUMAN Peroxisome biogenesis factor 1 OS=Homo sapiens GN=PEX1 PE=1 SV=1
Length = 1283
Score = 273 bits (697), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 174/449 (38%), Positives = 247/449 (55%), Gaps = 68/449 (15%)
Query: 591 GHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE 650
G +L+ G GSGK++LAKA+ K E L AH+ V C L ++ I++ L SE
Sbjct: 593 GALLLTGGKGSGKSTLAKAICK--EAFDKLDAHVERVDCKALRGKRLENIQKTLEVAFSE 650
Query: 651 ALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIA--LTKFLVDIMDEYGEKRKSSCGIG 708
A+ PS+V+ D+LD I + PE +V + L L D++ E+ +G
Sbjct: 651 AVWMQPSVVLLDDLDLIAGLPAVPEHEHSPDAVQSQRLAHALNDMIKEF-------ISMG 703
Query: 709 P-IAFVASAQSLEKI-PQSLTSSGRFDFH-VQLPAPAASERKAILEHEIQRRSLEC---- 761
+A +A++QS + + P +++ G F VQ P E++ + + + L+C
Sbjct: 704 SLVALIATSQSQQSLHPLLVSAQGVHIFQCVQHIQPPNQEQRCEILCNVIKNKLDCDINK 763
Query: 762 -SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAM 820
+D L VA + G+ A D +LVDR +H+ + R S S+ EK + TL DF +A+
Sbjct: 764 FTDLDLQHVAKETGGFVARDFTVLVDRAIHSRLSR--QSISTREKLVLTTL---DFQKAL 818
Query: 821 HEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSN 880
FLP ++R + GWD +GGL +++ + + I+LP+K+P +FA P+R R+
Sbjct: 819 RGFLPASLRSVNLHKPRD--LGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTG 876
Query: 881 VLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCL 940
+LLYGPPG GKT + G A + FISVKGPELL+KYIGASEQAVRDIF +A AA PC+
Sbjct: 877 ILLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCI 936
Query: 941 LFFDEFDSIAPKRGHDNTGVTDRVVNQVSSTSYLFIIYFWEVGKKEGVVPYDIYILVNFL 1000
LFFDEF+SIAP+RGHDNTGVTDRVVNQ+
Sbjct: 937 LFFDEFESIAPRRGHDNTGVTDRVVNQL-------------------------------- 964
Query: 1001 ISACPCFQQFLTELDGVEVLTGVFVFAAT 1029
LT+LDGVE L GV+V AAT
Sbjct: 965 ----------LTQLDGVEGLQGVYVLAAT 983
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 30/175 (17%)
Query: 13 NCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVVAWSGATSSSSFIE------ 66
+CF+ LP +L+ L HLL NQ V WS + S++E
Sbjct: 26 DCFLHLPRRLVAQL------HLL-----------QNQAIEVVWSHQPAFLSWVEGRHFSD 68
Query: 67 -------VARQFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEA 119
+ RQ + + L++ V ++ S+V+ V +EPL+ DDWE+LEL++ E
Sbjct: 69 QGENVAEINRQVGQKLGLSNGGQVFLKPCSHVVSCQQVEVEPLSADDWEILELHAVSLEQ 128
Query: 120 AILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRK 174
+L+Q+RIV FP+W+ +T I +V+ P +L T++ + PK R+
Sbjct: 129 HLLDQIRIVFPKAIFPVWVDQQTYIFIQIVALIPAASYGRLETDTKLLIQPKTRR 183
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQAL 644
IL++GPPG+GKT LA +A+ + + F+ KGP + QA+
Sbjct: 877 ILLYGPPGTGKTLLAGVIARE--------SRMNFISV------KGPELLSKYIGASEQAV 922
Query: 645 SNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSS 704
+ A P I+ FD +SI P +T V ++++ +
Sbjct: 923 RDIFIRAQAAKPCILFFDEFESIA-----PRRGHDNTGVTD------RVVNQLLTQLDGV 971
Query: 705 CGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDE 764
G+ + +A+ + I +L GR D V P P R IL + SL +D+
Sbjct: 972 EGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEIL--NVLSDSLPLADD 1029
Query: 765 I-LLDVASKCDGYDAYDLEILV 785
+ L VAS D + DL+ L+
Sbjct: 1030 VDLQHVASVTDSFTGADLKALL 1051
>sp|Q5BL07|PEX1_MOUSE Peroxisome biogenesis factor 1 OS=Mus musculus GN=Pex1 PE=1 SV=2
Length = 1284
Score = 258 bits (659), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 171/451 (37%), Positives = 240/451 (53%), Gaps = 72/451 (15%)
Query: 591 GHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE 650
G +LI G GSGK++ AKA+ K E L A + V C L ++ I++AL SE
Sbjct: 594 GALLITGGKGSGKSTFAKAICK--EAQDTLDARVETVDCKALRGKRLESIQKALEVAFSE 651
Query: 651 ALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIA--LTKFLVDIMDEYGEKRKSSCGIG 708
A PS+++ D+LD I S PE +V + L L D++ E+ S G
Sbjct: 652 AAWRQPSVILLDDLDLIAGLPSVPEQEHSPEAVQSQRLAHALNDMIKEF-----VSTG-S 705
Query: 709 PIAFVASAQSLEKIPQSLTSS-GRFDF----HVQLPAPAASERKAILEHEIQRRSLECSD 763
+A +A++Q + + SL S+ G F H+Q P P E++ + H + + L C
Sbjct: 706 LVALIATSQLQQSLHPSLVSAQGIHTFQCVQHLQPPNP---EQRCEILHSVVKNKLGCDI 762
Query: 764 EILLDVASKCDGYD-----AYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQ 818
D+ +C D A D +LVDR +H+++ R S TL DF +
Sbjct: 763 SNFPDLDLQCIAKDTEAFVARDFTVLVDRAIHSSLSRQHSSSRE-----DLTLTTSDFQK 817
Query: 819 AMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLR 878
A+ FLP ++R++ GWD +GGL +++ + + I+LP+K+P +FA P+R R
Sbjct: 818 ALRGFLPASLRNVNLHKPRD--LGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQR 875
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
+ +LLYGPPG GKT + G A + FIS+KGPELL+KYIGASEQAVRD+F +A AA P
Sbjct: 876 TGILLYGPPGTGKTLLAGVVARESGMNFISIKGPELLSKYIGASEQAVRDVFIRAQAAKP 935
Query: 939 CLLFFDEFDSIAPKRGHDNTGVTDRVVNQVSSTSYLFIIYFWEVGKKEGVVPYDIYILVN 998
C+LFFDEF+SIAP+RGHDNTGVTDRVVNQ+
Sbjct: 936 CILFFDEFESIAPRRGHDNTGVTDRVVNQL------------------------------ 965
Query: 999 FLISACPCFQQFLTELDGVEVLTGVFVFAAT 1029
LT+LDGVE L GV+V AAT
Sbjct: 966 ------------LTQLDGVEGLQGVYVLAAT 984
Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 120/253 (47%), Gaps = 26/253 (10%)
Query: 13 NCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQ---RWVVAWSGATSSSSFIEVAR 69
+CF+ LP +L+ L HLL Q ++E+ S WV S + E+ R
Sbjct: 26 DCFLHLPRRLVAQL------HLL-QNQAIEVASDHQPTYLSWVEGRHFNDQSENVAEINR 78
Query: 70 QFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAAILNQVRIVH 129
Q + + L+ V +R S+V+ V +EPL+ DDWE+LEL++ E +L+Q+RIV
Sbjct: 79 QVGQKLGLSSGDQVFLRPCSHVVSCQQVEVEPLSADDWEILELHAISLEQHLLDQIRIVF 138
Query: 130 EAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRK---NNVKKHEDSYMQ 186
P+W+ +T I +V+ P P +L T++ + PK R+ + K D++ Q
Sbjct: 139 PKAVVPIWVDQQTYIFIQIVTLMPAAPYGRLETNTKLLIQPKTRQAKESTFPKEGDAHGQ 198
Query: 187 AFN---ESTSIAKAL--LRVQDSDEGLS----HKCNVKGVELG----VALTSVAFINPET 233
+ E ++K L ++ + EG++ V G L L S+ P++
Sbjct: 199 VHSYGREQKGLSKELQTRQLHTNSEGITASNGRDPKVPGGPLKPSWWAVLGSMLSFGPDS 258
Query: 234 AENVSLCSLELVA 246
+ + SLEL A
Sbjct: 259 KQESAWGSLELGA 271
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 37/217 (17%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQAL 644
IL++GPPG+GKT LA VA+ + + F+ KGP + QA+
Sbjct: 878 ILLYGPPGTGKTLLAGVVARE--------SGMNFISI------KGPELLSKYIGASEQAV 923
Query: 645 SNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSS 704
+ A P I+ FD +SI P +T V ++++ +
Sbjct: 924 RDVFIRAQAAKPCILFFDEFESIA-----PRRGHDNTGVTD------RVVNQLLTQLDGV 972
Query: 705 CGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDE 764
G+ + +A+ + I +L GR D V P P R IL + +SL +D+
Sbjct: 973 EGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEIL--TVLSKSLALADD 1030
Query: 765 I-LLDVASKCDGYDAYDLE-ILVDRTVHAAVGRYLHS 799
+ L VAS D + DL+ +L + + A GR L S
Sbjct: 1031 VDLQHVASVTDSFTGADLKALLYNAQLEALQGRLLPS 1067
>sp|Q54GX5|PEX1_DICDI Peroxisome biogenesis factor 1 OS=Dictyostelium discoideum GN=pex1
PE=3 SV=1
Length = 1227
Score = 256 bits (653), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 166/467 (35%), Positives = 243/467 (52%), Gaps = 76/467 (16%)
Query: 586 HLPLPG--HILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQA 643
L PG ++I G GSGK+ LA ++ A I+ + C++L K IR+
Sbjct: 596 QLNTPGVNGMIIAGSHGSGKSLLATSLGGYYSTDSRSNAFIIKLDCNQLKELKVENIRKQ 655
Query: 644 LSNFISEALDHAPS---------------IVIFDNLDSIISSSSDPEGSQPSTSVIALTK 688
+ ++ + + I+I ++LD I+ + +D Q S I +
Sbjct: 656 FNKLFYKSCKESGNTLSATTSTNTTPPPIIIILESLDLILGTPND----QDPGSKIRCEQ 711
Query: 689 FLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKA 748
+ I + + S I IA V S+QSL QS+ F ++L AP ER
Sbjct: 712 LVSHIKSLCFKYQNRSSPIVMIATVISSQSL---CQSIQIPELFGLTIELQAPTREERVE 768
Query: 749 ILEHEIQRRSLECSDEI---LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEK 805
ILE ++ + + D+ L+ ++ +GY D+E +VDR++H + + + ++++
Sbjct: 769 ILERYLKYQGKQLKDQQSLNLMKFSASMEGYLGCDVEQIVDRSIHLSSIKEIENNNNNND 828
Query: 806 HIKPTLVRDDFS---QAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIEL 862
+ + FS +A + P+ ++ I S+E W D+GGL ++ +KE IE
Sbjct: 829 DNDDDNIIE-FSIIEKAKEGYTPITLKGIKLHSSE---IKWQDIGGLDSVRAMLKETIEW 884
Query: 863 PSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGAS 922
P+K+P +F +PLRLRS +LLYGP GCGKT + A A C L FISVKGPELLNKYIG+S
Sbjct: 885 PTKYPKLFQSSPLRLRSGILLYGPTGCGKTLLASAIAGECGLNFISVKGPELLNKYIGSS 944
Query: 923 EQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQVSSTSYLFIIYFWEV 982
EQ VRD+FS+A++A PC+LFFDEFDSIAP+RGHDN+GVTDRVVN
Sbjct: 945 EQGVRDVFSRASSAKPCVLFFDEFDSIAPRRGHDNSGVTDRVVN---------------- 988
Query: 983 GKKEGVVPYDIYILVNFLISACPCFQQFLTELDGVEVLTGVFVFAAT 1029
QFLT+LDGVE LTGV+V AAT
Sbjct: 989 --------------------------QFLTQLDGVEGLTGVYVLAAT 1009
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 106/183 (57%), Gaps = 12/183 (6%)
Query: 1 MELEVRVVGGVENCFVSLPLKLIETL------ESTRSAHLLPQVLSLELRSRSNQRWVVA 54
MEL V++ + CFVSLP K++ +L +S L ++ + ++ + V
Sbjct: 1 MELHVQLKHSTD-CFVSLPPKIVHSLLLLSEKQSKSLGTLGLEITWYDKINKKENKGYVG 59
Query: 55 WSGATSSSSF---IEVARQFAECIS-LADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVL 110
W+G ++ F IE++++ A+C+ + + ++++ ++N+ A V +EPLT DDWE++
Sbjct: 60 WAGGSTDPRFTDSIEMSQEMAQCLGGIKNEQKLKLKALNNIELAHSVQVEPLTSDDWEIM 119
Query: 111 ELNSEHAEAAILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAP 170
E++ ++ E +LNQV I++ P+W+H +TII V T P PVV+L +E+ VAP
Sbjct: 120 EVHQQYLEEQLLNQVNILYSGQIVPIWIHHKTIIKLKVTETLP-TPVVKLSSNSEIIVAP 178
Query: 171 KRR 173
K R
Sbjct: 179 KPR 181
Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 67/177 (37%), Gaps = 33/177 (18%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + L L IL++GP G GKT LA A+A C KGP +
Sbjct: 892 FQSSPLRLRSGILLYGPTGCGKTLLASAIAGE--------------CGLNFISVKGPELL 937
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
Q + + S A P ++ FD DSI P ++ V +
Sbjct: 938 NKYIGSSEQGVRDVFSRASSAKPCVLFFDEFDSIA-----PRRGHDNSGVTD------RV 986
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAIL 750
++++ + G+ + +A+ + I +L GR D + P +ER IL
Sbjct: 987 VNQFLTQLDGVEGLTGVYVLAATSRPDLIDPALLRPGRLDKSLYCNIPEFNERLDIL 1043
>sp|P46463|PEX1_PICPA Peroxisome biosynthesis protein PAS1 OS=Komagataella pastoris GN=PEX1
PE=3 SV=1
Length = 1157
Score = 251 bits (640), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 160/484 (33%), Positives = 240/484 (49%), Gaps = 103/484 (21%)
Query: 591 GHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE 650
G L+ G GSGK+ + VA+ + + V + C ++ E +R + SE
Sbjct: 517 GGSLLFGTSGSGKSLVISQVAQIVTNKGHFVK---LLNCDKIMSESYNNLRGIFEDIFSE 573
Query: 651 ALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPI 710
APS++I ++LDS+I + + S S L+++ + + R I
Sbjct: 574 VSWKAPSLLILEDLDSLIPAEQEHSDSSQSRQ---LSEYFISKLSAQTINRD-------I 623
Query: 711 AFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSD-EILLDV 769
+AS++S E + + ++ + QL AP RK IL+ + ++ CS+ E+L ++
Sbjct: 624 TILASSKSKESLNSLIFTTHLIEHDFQLRAPDKEARKQILQSYLDTLNVFCSEGELLNNI 683
Query: 770 ASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIK--------------------- 808
A + +GY DL++L DR H + R + +DS E I+
Sbjct: 684 AVETEGYLPKDLKVLCDRAYHDLISRDILADSDSELDIEESSTPILNGSVGDIANKQSEI 743
Query: 809 -----------------------PTLVRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDD 845
T+ +D+F A+ ++P ++R + ++ WDD
Sbjct: 744 ENGISGLELTNNSSSTIAVDKHGATIQKDNFDSALSGYIPQSLRGVKLQKSD---VRWDD 800
Query: 846 VGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR 905
+GGL D ++ + E +E P+K+ IF+ PLRLRS +LLYG PGCGKT + A AA C L
Sbjct: 801 IGGLRDAKSILLETLEWPTKYAPIFSSCPLRLRSGILLYGYPGCGKTLLASAVAAQCGLN 860
Query: 906 FISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVV 965
FIS+KGPE+LNKYIG SEQ+VR++F +A AA PC+LFFDEFDSIAPKRGHD+TGVTDRVV
Sbjct: 861 FISIKGPEILNKYIGPSEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGVTDRVV 920
Query: 966 NQVSSTSYLFIIYFWEVGKKEGVVPYDIYILVNFLISACPCFQQFLTELDGVEVLTGVFV 1025
NQ+ LT++DG E L GV+V
Sbjct: 921 NQM------------------------------------------LTQMDGAEGLDGVYV 938
Query: 1026 FAAT 1029
AAT
Sbjct: 939 LAAT 942
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 17/141 (12%)
Query: 46 RSNQRWVV--AWSGA----TSSSSFIEVARQFAECISLADHTIVQVRVVSNVLKATLVTI 99
R+ QR + W+G +SS+ IE+ R A I L ++ V V V + +KA V +
Sbjct: 49 RAAQRRIAYCGWAGGITKTSSSNPVIEIDRSLASAIDLQENVNVTVNVHIDAVKAITVEL 108
Query: 100 EPLTEDDWEVLELNSEHAEAAILNQVRIVHEAMRFPLWLHGRTIITFHV------VSTFP 153
EP+T +DWE++E +++ E +LNQ R V+ ++ +T V VSTF
Sbjct: 109 EPVTSNDWEIVETHAQVLETYLLNQTRCVYPNQVLVVYPTPQTTARLLVKKIEPEVSTF- 167
Query: 154 KKPVVQLVPGTEVAVAPKRRK 174
QL TEV +APK +K
Sbjct: 168 ----AQLFNDTEVQIAPKVQK 184
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 89/231 (38%), Gaps = 36/231 (15%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
FS+ L L IL++G PG GKT LA AVA C KGP I
Sbjct: 825 FSSCPLRLRSGILLYGYPGCGKTLLASAVAAQ--------------CGLNFISIKGPEIL 870
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
Q++ A P I+ FD DSI P+ ST V +
Sbjct: 871 NKYIGPSEQSVRELFERAQAAKPCILFFDEFDSIA-----PKRGHDSTGVTD------RV 919
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
+++ + + G+ + +A+ + I +L GR D V P +R IL+
Sbjct: 920 VNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPDFDDRLDILQSV 979
Query: 754 IQRRSLECSDEI-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSF 803
R++ S + L VA +C G+ DL+ L AV L D S
Sbjct: 980 T--RNMNVSKSVNLSSVAGECSGFSGADLQALAYNAYLKAVHEKLTKDESM 1028
>sp|P24004|PEX1_YEAST Peroxisomal ATPase PEX1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PEX1 PE=1 SV=2
Length = 1043
Score = 218 bits (556), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 144/452 (31%), Positives = 220/452 (48%), Gaps = 83/452 (18%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRL----SLEKGPIIRQALSNFI 648
I++ G G GKT L K + +E KD + + C L +L+K ++ + +
Sbjct: 457 IILDGKQGIGKTRLLKELINEVE--KDHHIFVKYADCETLHETSNLDK---TQKLIMEWC 511
Query: 649 SEALDHAPSIVIFDNLDSII----SSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSS 704
S + PS+++ DN++++ ++ DP + + L F ++ + + K
Sbjct: 512 SFCYWYGPSLIVLDNVEALFGKPQANDGDPSNNGQWDNASKLLNFFINQVTKIFNKDNKR 571
Query: 705 CGIGPIAFVASAQSLEKIPQSLTSSGRFDFHV-----QLPAPAASERKAILEHEIQRRSL 759
I + S + +I L FD H L AP R +LE+ + +
Sbjct: 572 -----IRVLFSGKQKTQINPLL-----FDKHFVSETWSLRAPDKHARAKLLEYFFSKNQI 621
Query: 760 E--CSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFS 817
D D++ + +G+ DLEI ++ + D E+ + R+ FS
Sbjct: 622 MKLNRDLQFSDLSLETEGFSPLDLEIFTEKIFY---------DLQLERDCDNVVTRELFS 672
Query: 818 QAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRL 877
+++ F P A+R + T + W D+G L + ++ + E +E P+K+ IF PLRL
Sbjct: 673 KSLSAFTPSALRGVKLTKETNIK--WGDIGALANAKDVLLETLEWPTKYEPIFVNCPLRL 730
Query: 878 RSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAA 937
RS +LLYG PGCGKT + A A C L FISVKGPE+LNK+IGASEQ +R++F +A +
Sbjct: 731 RSGILLYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVK 790
Query: 938 PCLLFFDEFDSIAPKRGHDNTGVTDRVVNQVSSTSYLFIIYFWEVGKKEGVVPYDIYILV 997
PC+LFFDEFDSIAPKRGHD+TGVTDRVVNQ+
Sbjct: 791 PCILFFDEFDSIAPKRGHDSTGVTDRVVNQL----------------------------- 821
Query: 998 NFLISACPCFQQFLTELDGVEVLTGVFVFAAT 1029
LT++DG E L GV++ AAT
Sbjct: 822 -------------LTQMDGAEGLDGVYILAAT 840
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 90/233 (38%), Gaps = 43/233 (18%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F L L IL++G PG GKT LA AVA+ C KGP I
Sbjct: 723 FVNCPLRLRSGILLYGYPGCGKTLLASAVAQQ--------------CGLNFISVKGPEIL 768
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
Q + A P I+ FD DSI P+ ST V +
Sbjct: 769 NKFIGASEQNIRELFERAQSVKPCILFFDEFDSIA-----PKRGHDSTGVTD------RV 817
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
+++ + + G+ + +A+ + I +L GR D V P SER IL+
Sbjct: 818 VNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIPTESERLDILQAI 877
Query: 754 IQRR---------SLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYL 797
+ + +LE + ++ L +A K G+ DL+ L +V R+L
Sbjct: 878 VNSKDKDTGQKKFALEKNADLKL-IAEKTAGFSGADLQGLCYNAYLKSVHRWL 929
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 12/187 (6%)
Query: 3 LEVRVVGGVENCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVV--AWSGATS 60
L ++ + F+ LP +I LEST A Q + + S ++ +V W G S
Sbjct: 12 LRIQFSNAIVGNFLRLPHSIINVLESTNYA---IQEFGIAVHSHNSDIPIVHLGWDGHDS 68
Query: 61 SSS--FIEVARQFAECISLADHTIV---QVRVVSNVLKATLVTIEPLTEDDWEVLELNS- 114
SS + + A L + + ++ + AT V + P T DDWE+++ N+
Sbjct: 69 GSSENVVLINPVLATVYDLNQKSPLVDLYIQRYDHTHLATEVYVTPETSDDWEIIDANAM 128
Query: 115 EHAEAAILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRK 174
IL+Q RIV +L G + F + P ++ G+ V VAPK K
Sbjct: 129 RFQNGEILHQTRIVTPGETLICYLEG-IVTKFKIDRVEPSMKSARITDGSLVVVAPKVNK 187
Query: 175 NNVKKHE 181
+ K E
Sbjct: 188 TRLVKAE 194
>sp|O05209|VAT_THEAC VCP-like ATPase OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM
1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=vat PE=1
SV=1
Length = 745
Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 149/466 (31%), Positives = 219/466 (46%), Gaps = 88/466 (18%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + P ++++GPPG+GKT +A+AVA + F+ + GP I
Sbjct: 216 FERLGITPPKGVILYGPPGTGKTLIARAVANE--------SGANFLSIN------GPEIM 261
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
Q L S+A + APSI+ D +DSI + +G + V+A L+D
Sbjct: 262 SKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEVQG-EVERRVVAQLLTLMDG 320
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
M E G + + + ++ I +L GRFD +++ P + RK IL
Sbjct: 321 MKERGH----------VIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRNGRKEILMIH 370
Query: 754 IQRRSLECSDE----ILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHS---DSSFEKH 806
+ L S+E L ++A G+ DL LV + A+ RYL D
Sbjct: 371 TRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAALVRESAMNALRRYLPEIDLDKPIPTE 430
Query: 807 I--KPTLVRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPS 864
I K + DDF A+ P ++R++ E WDD+GGL D++ IKE +ELP
Sbjct: 431 ILEKMVVTEDDFKNALKSIEPSSLREVM---VEVPNVHWDDIGGLEDVKREIKETVELPL 487
Query: 865 KFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQ 924
P++F + +R LLYGPPG GKT + A A + FIS+KGPE+L+K++G SE+
Sbjct: 488 LKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGESEK 547
Query: 925 AVRDIFSKATAAAPCLLFFDEFDSIAPKRG-HDNTGVTDRVVNQVSSTSYLFIIYFWEVG 983
A+R+IF KA AP ++F DE DSIAP+RG ++GVT+R+VN
Sbjct: 548 AIREIFKKAKQVAPAIVFLDEIDSIAPRRGTTSDSGVTERIVN----------------- 590
Query: 984 KKEGVVPYDIYILVNFLISACPCFQQFLTELDGVEVLTGVFVFAAT 1029
Q LT LDG+EV+ GV V AT
Sbjct: 591 -------------------------QLLTSLDGIEVMNGVVVIGAT 611
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 83/132 (62%)
Query: 837 EGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVG 896
E R ++D+GGL++ I+EMIELP K P +F + + V+LYGPPG GKT I
Sbjct: 183 EVSRISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIAR 242
Query: 897 AAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHD 956
A A F+S+ GPE+++KY G SEQ +R+IFSKA AP ++F DE DSIAPKR
Sbjct: 243 AVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEV 302
Query: 957 NTGVTDRVVNQV 968
V RVV Q+
Sbjct: 303 QGEVERRVVAQL 314
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 36/220 (16%)
Query: 573 LLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRL 632
LL PD F + L++GPPG GKT LAKAVA ++ F+
Sbjct: 487 LLKPD---VFKRLGIRPSKGFLLYGPPGVGKTLLAKAVATE--------SNANFISI--- 532
Query: 633 SLEKGPII--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVI 684
KGP + +A+ +A AP+IV D +DSI +TS
Sbjct: 533 ---KGPEVLSKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPRRG-------TTSDS 582
Query: 685 ALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAAS 744
+T+ +V+ + + + G+ + + + + +L +GRFD + +P P
Sbjct: 583 GVTERIVNQLLTSLDGIEVMNGV---VVIGATNRPDIMDPALLRAGRFDKLIYIPPPDKE 639
Query: 745 ERKAILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEIL 784
R +IL+ + L D L D+A + +GY DLE L
Sbjct: 640 ARLSILKVHTKNMPL-APDVDLNDIAQRTEGYVGADLENL 678
>sp|Q9HPF0|CDCH_HALSA Protein CdcH OS=Halobacterium salinarum (strain ATCC 700922 / JCM
11081 / NRC-1) GN=cdcH PE=3 SV=1
Length = 742
Score = 217 bits (552), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 153/463 (33%), Positives = 217/463 (46%), Gaps = 86/463 (18%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + P +L+HGPPG+GKT LAKAVA S S+ II
Sbjct: 215 FQKLGIEPPQGVLLHGPPGTGKTLLAKAVANE-------------TSASFFSIAGPEIIS 261
Query: 641 ------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIM 694
Q L +A D +PSI+ D LDSI D G + V+A ++D +
Sbjct: 262 KYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKREDVTG-EVERRVVAQLLTMMDGL 320
Query: 695 DEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEI 754
+ G G + +A+ ++ + +L GRFD +++ P R+ IL+ I
Sbjct: 321 E----------GRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIGREEILK--I 368
Query: 755 QRRSLECSDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLV- 812
R + SD++ L +A G+ D+E L A+ RYL E+ I P+L+
Sbjct: 369 HTRGMPLSDDVNLSTLADDTHGFVGADIESLSKEAAMRALRRYLPEIDLDEEDIPPSLID 428
Query: 813 -----RDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFP 867
R+DF A+ E P AMR++ E + WDDVGGLT+ +N +KE +E P P
Sbjct: 429 RMIVKREDFKGALSEVEPSAMREVL---VELPKITWDDVGGLTEAKNNVKESVEWPLNQP 485
Query: 868 NIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVR 927
F + + + VLLYGPPG GKT + A A + FISV+GP+LL+K++G SE+A+R
Sbjct: 486 EKFTRMGVEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIR 545
Query: 928 DIFSKATAAAPCLLFFDEFDSIAPKRGH-DNTGVTDRVVNQVSSTSYLFIIYFWEVGKKE 986
F KA AP ++FFDE DS+AP RG V++RVVN
Sbjct: 546 QTFRKARQVAPTVIFFDELDSLAPGRGQTGGNNVSERVVN-------------------- 585
Query: 987 GVVPYDIYILVNFLISACPCFQQFLTELDGVEVLTGVFVFAAT 1029
Q LTELDG+E + V V AAT
Sbjct: 586 ----------------------QLLTELDGLEEMEEVMVIAAT 606
Score = 120 bits (300), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 83/132 (62%), Gaps = 2/132 (1%)
Query: 838 GGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGA 897
GG ++D+GGL + ++EM+ELP K P IF + + VLL+GPPG GKT + A
Sbjct: 183 GGGITYEDIGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKA 242
Query: 898 AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDN 957
A S F S+ GPE+++KY G SEQ +R+IF A +P ++F DE DSIAPKR D
Sbjct: 243 VANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKR-EDV 301
Query: 958 TG-VTDRVVNQV 968
TG V RVV Q+
Sbjct: 302 TGEVERRVVAQL 313
Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 109/242 (45%), Gaps = 28/242 (11%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F+ + P +L++GPPG+GKT +AKAVA E + + ++ S+ E IR
Sbjct: 488 FTRMGVEPPAGVLLYGPPGTGKTLMAKAVAN--ETNANFISVRGPQLLSKWVGESEKAIR 545
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
Q +A AP+++ FD LDS+ G+ S V+ +D ++E E
Sbjct: 546 QTFR----KARQVAPTVIFFDELDSLAPGRGQTGGNNVSERVVNQLLTELDGLEEMEE-- 599
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+ +A+ + I +L SGRFD VQ+ P R+ IL+ Q L
Sbjct: 600 --------VMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGREQILKIHTQDTPL-A 650
Query: 762 SDEILLDVASKCDGYDAYDL---------EILVDRTVHAAVGRYLHSDSSFEKHIKPTLV 812
+D L ++A + DGY DL E L D VG H ++ E +++PT+
Sbjct: 651 ADVSLRELAERADGYVGSDLANIAREAAIEALRDDEDADDVG-MAHFRAAME-NVRPTIT 708
Query: 813 RD 814
D
Sbjct: 709 DD 710
>sp|O28972|Y1297_ARCFU Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628
/ NBRC 100126) GN=AF_1297 PE=3 SV=1
Length = 733
Score = 211 bits (538), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 148/464 (31%), Positives = 222/464 (47%), Gaps = 88/464 (18%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + P +L++GPPG+GKT +AKAVA ++ H F+ S GP I
Sbjct: 208 FQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEVDAH--------FIPIS------GPEIM 253
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
Q L EA ++APSI+ D +DSI + G + V+A L+D
Sbjct: 254 SKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTG-EVERRVVAQLLALMDG 312
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
++ G+ + +A+ + I +L GRFD +++ P RK ILE
Sbjct: 313 LEARGD----------VIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILE-- 360
Query: 754 IQRRSLECSDEI-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLV 812
I R + ++++ L ++A +G+ DLE L A+ R L + I ++
Sbjct: 361 IHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRRVLPEIDIEAEEIPAEVI 420
Query: 813 ------RDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKF 866
R+DF +A+ P AMR++ E W+D+GGL + + E +E P K+
Sbjct: 421 ENLKVTREDFMEALKNIEPSAMREVL---VEVPNVKWEDIGGLEHAKQELMEAVEWPLKY 477
Query: 867 PNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAV 926
P +F A ++ +LL+GPPG GKT + A A + FISVKGPELL+K++G SE+ V
Sbjct: 478 PEVFRAANIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHV 537
Query: 927 RDIFSKATAAAPCLLFFDEFDSIAPKRGH-DNTGVTDRVVNQVSSTSYLFIIYFWEVGKK 985
R++F KA APC++FFDE DS+AP+RG ++ VT+RVV+
Sbjct: 538 REMFRKARQVAPCVIFFDEIDSLAPRRGGIGDSHVTERVVS------------------- 578
Query: 986 EGVVPYDIYILVNFLISACPCFQQFLTELDGVEVLTGVFVFAAT 1029
Q LTELDG+E L V V AAT
Sbjct: 579 -----------------------QLLTELDGLEELKDVVVIAAT 599
Score = 120 bits (302), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 77/126 (61%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
++D+GGL ++EMIELP K P +F + + VLLYGPPG GKT I A A
Sbjct: 181 YEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEV 240
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
FI + GPE+++KY G SEQ +R+IF +A AP ++F DE DSIAPKR V
Sbjct: 241 DAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTGEVER 300
Query: 963 RVVNQV 968
RVV Q+
Sbjct: 301 RVVAQL 306
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 107/250 (42%), Gaps = 51/250 (20%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F ++ P IL+ GPPG+GKT LAKAVA ++ F+ KGP
Sbjct: 481 FRAANIKPPRGILLFGPPGTGKTLLAKAVANE--------SNANFISV------KGP--- 523
Query: 642 QALSNFISEALDH-----------APSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFL 690
+ LS ++ E+ H AP ++ FD +DS+ S + V++
Sbjct: 524 ELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAPRRGGIGDSHVTERVVSQLLTE 583
Query: 691 VDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAIL 750
+D ++E + + +A+ + I +L GR + H+ +P P R I
Sbjct: 584 LDGLEELKD----------VVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKARVEIF 633
Query: 751 EHEIQRRSLECSDEI-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKP 809
+I R +D++ + ++A K +GY D+E + A+ R L IKP
Sbjct: 634 --KIHLRGKPLADDVNIEELAEKTEGYSGADIEAVCREAGMLAI-REL---------IKP 681
Query: 810 TLVRDDFSQA 819
+ R++ +A
Sbjct: 682 GMTREEAKEA 691
>sp|P32794|AFG2_YEAST ATPase family gene 2 protein OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=AFG2 PE=1 SV=1
Length = 780
Score = 211 bits (538), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 145/456 (31%), Positives = 219/456 (48%), Gaps = 73/456 (16%)
Query: 581 WFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII 640
FS++ + P IL+HGPPG+GKT L + VA + AH++ + + +
Sbjct: 270 LFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSN------AHVLTINGPSIVSKYLGET 323
Query: 641 RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEK 700
AL + +EA + PSI+ D +DSI + ++ + + + V+A L+ +MD G
Sbjct: 324 EAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSGEVESRVVAT---LLTLMDGMG-- 378
Query: 701 RKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLE 760
G + +A+ + +L GRFD V++ P R IL + R S
Sbjct: 379 -----AAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQFSRMS-- 431
Query: 761 CSDEILLD------VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEK-HIKPTLVR 813
SD +LD +ASK GY DL L +V + R L +D++ +K +K TL
Sbjct: 432 -SDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGLGTDANIDKFSLKVTL-- 488
Query: 814 DDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQA 873
D AM + P AMR+I E + W D+GG +++ +KEMI+LP + FA+
Sbjct: 489 KDVESAMVDIRPSAMREIF---LEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETFARL 545
Query: 874 PLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKA 933
+ VLLYGPPGC KT A A + F++VKGPE+ NKY+G SE+A+R+IF KA
Sbjct: 546 GISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIFRKA 605
Query: 934 TAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQVSSTSYLFIIYFWEVGKKEGVVPYDI 993
+AAP ++FFDE D+++P R +T + V+
Sbjct: 606 RSAAPSIIFFDEIDALSPDRDGSSTSAANHVLT--------------------------- 638
Query: 994 YILVNFLISACPCFQQFLTELDGVEVLTGVFVFAAT 1029
L E+DGVE L GV + AAT
Sbjct: 639 ---------------SLLNEIDGVEELKGVVIVAAT 659
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 33/220 (15%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F+ + P +L++GPPG KT AKA+A + I F+ KGP I
Sbjct: 542 FARLGISAPKGVLLYGPPGCSKTLTAKALATE--------SGINFLAV------KGPEIF 587
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
+A+ +A APSI+ FD +D++ S D +GS S + LT L +I
Sbjct: 588 NKYVGESERAIREIFRKARSAAPSIIFFDEIDAL---SPDRDGSSTSAANHVLTSLLNEI 644
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
D E + + VA+ ++I +L GR D H+ + P + R IL+
Sbjct: 645 -DGVEELKG-------VVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKC 696
Query: 754 IQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAV 793
++ + E S L ++A + +GY ++ +L AA+
Sbjct: 697 TKKFNTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAI 736
>sp|Q3UMC0|SPAT5_MOUSE Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2
SV=2
Length = 893
Score = 211 bits (536), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 146/455 (32%), Positives = 219/455 (48%), Gaps = 68/455 (14%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F +Y +P P +L++GPPG+GKT +A+AVA + + ++ + S+ E +R
Sbjct: 379 FKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEII--SKFYGETEARLR 436
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
Q +EA PSI+ D LD++ EG+Q + L +MD G
Sbjct: 437 Q----IFAEATLRHPSIIFIDELDALCPKR---EGAQSEVEKRVVASLLT-LMDGIG--- 485
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
S G + + + + + +L GRFD +++ P A +R IL+ ++R
Sbjct: 486 -SEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLL 544
Query: 762 SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHS-----DSSFEKHIKPTLVRDDF 816
+ LL +A+ GY DL+ L + A+ R L DS +K TL +DF
Sbjct: 545 TKAELLRLANNAHGYVGADLKALCNEAGLHALRRVLRKQPNLPDSKVAGMVKITL--NDF 602
Query: 817 SQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLR 876
Q M++ P AMR++ + + W D+GGL +I+ +K+ +E P K P F + ++
Sbjct: 603 LQGMNDIRPSAMREV---AIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQ 659
Query: 877 LRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAA 936
VLLYGPPGC KT I A A L F+++KGPEL+NKY+G SE+AVR+IF KA A
Sbjct: 660 PPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAV 719
Query: 937 APCLLFFDEFDSIAPKRGHDNTG--VTDRVVNQVSSTSYLFIIYFWEVGKKEGVVPYDIY 994
AP ++FFDE D++A +RG + V DRV
Sbjct: 720 APSIIFFDELDALAVERGSSSGAGNVADRV------------------------------ 749
Query: 995 ILVNFLISACPCFQQFLTELDGVEVLTGVFVFAAT 1029
Q LTE+DG+E L V V AAT
Sbjct: 750 ------------LAQLLTEMDGIEQLKNVTVLAAT 772
Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 71/123 (57%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+D +GGL AI+E+IELP K P +F + +LLYGPPG GKT I A A
Sbjct: 352 YDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEV 411
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ GPE+++K+ G +E +R IF++AT P ++F DE D++ PKR + V
Sbjct: 412 GAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSEVEK 471
Query: 963 RVV 965
RVV
Sbjct: 472 RVV 474
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 111/253 (43%), Gaps = 43/253 (16%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F+ + P +L++GPPG KT +AKA+A + + F+ KGP +
Sbjct: 653 FNRMGIQPPKGVLLYGPPGCSKTMIAKALANE--------SGLNFLAI------KGPELM 698
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
+A+ +A APSI+ FD LD++ G+ + L + L +
Sbjct: 699 NKYVGESERAVREIFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRV-LAQLLTE- 756
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
MD E+ K+ + +A+ ++I ++L GR D + +P P A+ R+ IL
Sbjct: 757 MDGI-EQLKN------VTVLAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIL--N 807
Query: 754 IQRRSLECSDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLV 812
+Q S+ S+E+ LD + + D Y ++ + A+ + +D ++H
Sbjct: 808 LQFHSMPISNEVDLDELVLQTDTYSGAEIIAVCKEAALLALEENIKADCIMKRH------ 861
Query: 813 RDDFSQAMHEFLP 825
F+QA+ P
Sbjct: 862 ---FTQALSIVTP 871
>sp|O74941|PEX1_SCHPO Peroxisomal ATPase pex1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=pex1 PE=3 SV=1
Length = 937
Score = 209 bits (531), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 135/438 (30%), Positives = 217/438 (49%), Gaps = 62/438 (14%)
Query: 592 HILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEA 651
+I I+GP G GK++L ++ + + + + V CS + + +N +A
Sbjct: 374 NIYINGPKGCGKSNLVHSLFDY--YSLNSIYFQMIVSCSEIDRSSFAKFQSFWNNVFIQA 431
Query: 652 LDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIA 711
+ PSI+ D++ +ISSS+ E + FL + KRK I
Sbjct: 432 ERYEPSIIYLDDVHCLISSSN--ENGELGFVEEREIAFLQHQIINLKRKRK-------II 482
Query: 712 FVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVAS 771
F+ + ++L F + LP+ A + RK IL Q + + + + ++
Sbjct: 483 FIGFGEEFLTFSENLVLPLLFQIKIALPSLAVTRRKEILTTIFQENFSDITMDSIEFISV 542
Query: 772 KCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMRDI 831
K +GY DL + V R + A ++ + KH+ + + + + +F+P+ +R
Sbjct: 543 KTEGYLMTDLVLFVKRLLSEA---FVEKIQNGPKHL---MNKGLIEKTLKDFVPLQLR-- 594
Query: 832 TKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGK 891
K W D+ G+ + + A++++IE P K+ I+ Q LRL + +LL+G PGCGK
Sbjct: 595 -KAKFVKSSIRWIDIAGMQEAKEAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCGK 653
Query: 892 THIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAP 951
T++ A ++ ++FIS+KGPELL+KYIG SEQ VRD+FS+A A PC+LFFDEFDS+AP
Sbjct: 654 TYLASAISSTFPVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSVAP 713
Query: 952 KRGHDNTGVTDRVVNQVSSTSYLFIIYFWEVGKKEGVVPYDIYILVNFLISACPCFQQFL 1011
+RG D+TGVTDRVVNQ+ L
Sbjct: 714 RRGQDSTGVTDRVVNQI------------------------------------------L 731
Query: 1012 TELDGVEVLTGVFVFAAT 1029
T++DG E L GV++ AAT
Sbjct: 732 TQMDGAESLDGVYIVAAT 749
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 5/173 (2%)
Query: 10 GVENCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVVAWSGATSSSSFIEVAR 69
+ +C V++P L+E++ + + V+ ++ + + SG S SF E+
Sbjct: 9 SLRSCLVNVPELLLESISEPVQNYAVQAVVC---KNDIKKTFYFGISGIPSQFSF-EIDS 64
Query: 70 QFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAAILNQVRIVH 129
+A + LA++ + + ++ + + IEP+T +DWE+ E N+ E +L Q R V
Sbjct: 65 TYAHTLKLAENQEINLSIIDCTHEIEQLEIEPVTSNDWEIAERNAAWLEENLLVQYR-VA 123
Query: 130 EAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRKNNVKKHED 182
RF ++L T I F + P +L+ TEV + PK + ++ E+
Sbjct: 124 TTERFIIYLPSGTFIQFQPLKLIPSSLCGRLLRTTEVLITPKPNTSAIEVKEN 176
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 34/215 (15%)
Query: 579 GLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGP 638
L + L LP IL+ G PG GKT LA A++ + + F+ KGP
Sbjct: 629 SLIYKQCRLRLPTGILLFGYPGCGKTYLASAISSTFP--------VQFISI------KGP 674
Query: 639 II--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFL 690
+ Q + + S A P ++ FD DS+ P Q ST V
Sbjct: 675 ELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSVA-----PRRGQDSTGVTD----- 724
Query: 691 VDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAIL 750
++++ + + + + VA+ + I +L GR D + P ER +L
Sbjct: 725 -RVVNQILTQMDGAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFCDLPNEEERLEVL 783
Query: 751 EHEIQRRSLECSDEILLDVASKCDGYDAYDLEILV 785
+ R +E + +L +++ DGY DL L+
Sbjct: 784 QKLANRFHIE-NAAMLKKLSTLTDGYTYADLSSLL 817
Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 866 FPNIFAQA--PLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFIS----VKGPELLNKYI 919
FP+ FAQ + L N+ + GP GCGK+++V + SL I V E+
Sbjct: 358 FPHEFAQVRNAVFLHQNIYINGPKGCGKSNLVHSLFDYYSLNSIYFQMIVSCSEIDRSSF 417
Query: 920 GASEQAVRDIFSKATAAAPCLLFFDE 945
+ ++F +A P +++ D+
Sbjct: 418 AKFQSFWNNVFIQAERYEPSIIYLDD 443
>sp|Q8NB90|SPAT5_HUMAN Spermatogenesis-associated protein 5 OS=Homo sapiens GN=SPATA5 PE=1
SV=3
Length = 893
Score = 207 bits (526), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 142/453 (31%), Positives = 215/453 (47%), Gaps = 64/453 (14%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F +Y +P P +L++GPPG+GKT +A+AVA + + ++ + S+ E +R
Sbjct: 379 FKSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEII--SKFYGETEAKLR 436
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
Q +EA PSI+ D LD++ EG+Q + L +MD G
Sbjct: 437 Q----IFAEATLRHPSIIFIDELDALCPKR---EGAQNEVEKRVVASLLT-LMDGIG--- 485
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
S G + + + + +L GRFD +++ P A +R IL+ ++R
Sbjct: 486 -SEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLL 544
Query: 762 SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVR---DDFSQ 818
++ LL +A+ GY DL++L + A+ R L + LV+ DF Q
Sbjct: 545 TEAELLQLANSAHGYVGADLKVLCNEAGLCALRRILKKQPNLPDVKVAGLVKITLKDFLQ 604
Query: 819 AMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLR 878
AM++ P AMR+I + + W D+GGL I+ +++ +E P K P F + ++
Sbjct: 605 AMNDIRPSAMREI---AIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPP 661
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
VLLYGPPGC KT I A A L F+++KGPEL+NKY+G SE+AVR+ F KA A AP
Sbjct: 662 KGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRKARAVAP 721
Query: 939 CLLFFDEFDSIAPKRGHD--NTGVTDRVVNQVSSTSYLFIIYFWEVGKKEGVVPYDIYIL 996
++FFDE D++A +RG V DRV
Sbjct: 722 SIIFFDELDALAVERGSSLGAGNVADRV-------------------------------- 749
Query: 997 VNFLISACPCFQQFLTELDGVEVLTGVFVFAAT 1029
Q LTE+DG+E L V + AAT
Sbjct: 750 ----------LAQLLTEMDGIEQLKDVTILAAT 772
Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 71/123 (57%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+D +GGL+ AI+E+IELP K P +F + VLLYGPPG GKT I A A
Sbjct: 352 YDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANEV 411
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ GPE+++K+ G +E +R IF++AT P ++F DE D++ PKR V
Sbjct: 412 GAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEVEK 471
Query: 963 RVV 965
RVV
Sbjct: 472 RVV 474
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 107/246 (43%), Gaps = 45/246 (18%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------R 641
P +L++GPPG KT +AKA+A + + F+ KGP +
Sbjct: 661 PKGVLLYGPPGCSKTMIAKALANE--------SGLNFLAI------KGPELMNKYVGESE 706
Query: 642 QALSNFISEALDHAPSIVIFDNLDSI-ISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEK 700
+A+ +A APSI+ FD LD++ + S + V+A +D +++ +
Sbjct: 707 RAVRETFRKARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKD- 765
Query: 701 RKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLE 760
+ +A+ ++I ++L GR D + +P P A+ R+ I ++Q S+
Sbjct: 766 ---------VTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIF--KLQFHSMP 814
Query: 761 CSDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQA 819
S+E+ LD + + D Y ++ + A+ + ++ ++H F+QA
Sbjct: 815 VSNEVDLDELILQTDAYSGAEIVAVCREAALLALEEDIQANLIMKRH---------FTQA 865
Query: 820 MHEFLP 825
+ P
Sbjct: 866 LSTVTP 871
>sp|Q58556|Y1156_METJA Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1156 PE=3 SV=1
Length = 903
Score = 206 bits (524), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 135/403 (33%), Positives = 201/403 (49%), Gaps = 46/403 (11%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + P +L+ GPPG+GKT LAKAVA + + GP I
Sbjct: 205 FEKLGIEPPKGVLLVGPPGTGKTLLAKAVANE--------------AGANFYVINGPEIM 250
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
+ L EA ++APSI+ D +D+I + G L L+ +
Sbjct: 251 SKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATGEVERR----LVAQLLTL 306
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
MD G G + + + + +L GRFD + + P RK IL+
Sbjct: 307 MD-------GLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQ-- 357
Query: 754 IQRRSLECSDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHS-DSSFEKHIKPTL 811
I R++ ++++ LD +A G+ DL L A+ R L S D E+ K L
Sbjct: 358 IHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRRVLPSIDLEAEEIPKEVL 417
Query: 812 -----VRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKF 866
DDF +A+ + P AMR++ E W+D+GGL +++ ++E +E P K
Sbjct: 418 DNLKVTMDDFKEALKDVEPSAMREVL---VEVPNVKWEDIGGLEEVKQELREAVEWPLKA 474
Query: 867 PNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAV 926
+F + +R VLL+GPPG GKT + A A FISVKGPE+ +K++G SE+A+
Sbjct: 475 KEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAI 534
Query: 927 RDIFSKATAAAPCLLFFDEFDSIAPKRGHD-NTGVTDRVVNQV 968
R+IF KA +APC++FFDE D+IAPKRG D ++ VTD+VVNQ+
Sbjct: 535 REIFRKARQSAPCIIFFDEIDAIAPKRGRDLSSAVTDKVVNQL 577
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 76/126 (60%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
++D+GGL + ++EMIELP + P +F + + VLL GPPG GKT + A A
Sbjct: 178 YEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEA 237
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
F + GPE+++KY+G +E+ +R IF +A AP ++F DE D+IAPKR V
Sbjct: 238 GANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATGEVER 297
Query: 963 RVVNQV 968
R+V Q+
Sbjct: 298 RLVAQL 303
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 117/293 (39%), Gaps = 48/293 (16%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + P +L+ GPPG+GKT LAKAVA + F+ KGP I
Sbjct: 478 FEKIGVRPPKGVLLFGPPGTGKTLLAKAVANESGAN--------FISV------KGPEIF 523
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
+A+ +A AP I+ FD +D+I S + V+ +D
Sbjct: 524 SKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDG 583
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
M+E + + +A+ + I +L GR D + +P P R I +
Sbjct: 584 MEEPKD----------VVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDIF--K 631
Query: 754 IQRRSLECSDEI-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTL- 811
I RS+ ++++ L ++A K +GY D+E L AV + E ++ +
Sbjct: 632 IHTRSMNLAEDVNLEELAKKTEGYTGADIEALCREAAMLAVRESIGKPWDIEVKLRELIN 691
Query: 812 ----VRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMI 860
+ F A E V + SAE G ++++NAI ++I
Sbjct: 692 YLQSISGTFRAAAVELNSVIKATKERESAEAGE--------FSELKNAIGKII 736
>sp|Q07590|SAV_SULAC Protein SAV OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM
639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=sav PE=3
SV=2
Length = 780
Score = 205 bits (521), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/434 (30%), Positives = 224/434 (51%), Gaps = 61/434 (14%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + P IL++GPPG+GKT LA+A+A + + F+ + GP I
Sbjct: 238 FQRLGIDPPKGILLYGPPGTGKTLLARALANEIGAY--------FITVN------GPEIM 283
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
Q + EA ++APSI+ D +D+I D G + V+A L+ +
Sbjct: 284 SKFYGESEQRIREIFKEAEENAPSIIFIDEIDAIAPKREDVTG-EVEKRVVAQ---LLTL 339
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
MD G K G G + + + + I +L GRFD +++ P RK IL+
Sbjct: 340 MD--GIK-----GRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGRKDILQ-- 390
Query: 754 IQRRSLECSDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDS-SFEKHIKPTL 811
+ R++ +D++ LD +A GY DL L A+ R++ + ++ P
Sbjct: 391 VHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIYALRRFVDEKKLNLDQPTIPAE 450
Query: 812 VRDDFSQAMHEFL-------PVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPS 864
+ + +M++FL P +R++ E + W+D+GGL +++ ++E +E P
Sbjct: 451 IIKELKVSMNDFLNALKSIQPSLLREVY---VEVPKVNWNDIGGLDNVKQQLREAVEWPL 507
Query: 865 KFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQ 924
+FP +F ++ + +LL+GPPG GKT + A A FI+V+GPE+L+K++G SE+
Sbjct: 508 RFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEK 567
Query: 925 AVRDIFSKATAAAPCLLFFDEFDSIAPKRG-HDNTGVTDRVVNQVSSTSYLFIIYFWEVG 983
A+R+IF KA AAP ++FFDE DSIAP RG ++GVT+R+VNQ+ +
Sbjct: 568 AIREIFRKARQAAPTVIFFDEIDSIAPIRGLSTDSGVTERIVNQL-------------LA 614
Query: 984 KKEGVVPYDIYILV 997
+ +G+VP + +++
Sbjct: 615 EMDGIVPLNKVVII 628
Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 81/127 (63%), Gaps = 2/127 (1%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
W+D+G L + + I+E++E P + P +F + + +LLYGPPG GKT + A A
Sbjct: 211 WEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTGKTLLARALANEI 270
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG-VT 961
FI+V GPE+++K+ G SEQ +R+IF +A AP ++F DE D+IAPKR D TG V
Sbjct: 271 GAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFIDEIDAIAPKR-EDVTGEVE 329
Query: 962 DRVVNQV 968
RVV Q+
Sbjct: 330 KRVVAQL 336
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 112/257 (43%), Gaps = 35/257 (13%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F+ + P IL+ GPPG+GKT LAKAVA E + +A S+ E IR
Sbjct: 513 FTKSGVTPPKGILLFGPPGTGKTMLAKAVA--TESGANFIAVRGPEILSKWVGESEKAIR 570
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+ +A AP+++ FD +DSI S + ++ + L + MD
Sbjct: 571 E----IFRKARQAAPTVIFFDEIDSIAPIRGLSTDSGVTERIV--NQLLAE-MD------ 617
Query: 702 KSSCGIGP---IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRS 758
GI P + +A+ + + +L GRFD + +P P + R IL+ +
Sbjct: 618 ----GIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVP 673
Query: 759 LECSDEILLDVASKCDGYDAYDLEILV-DRTVHAAVGRYLHSDSS-----------FEKH 806
L D L D+A K +GY DLE LV + T++A Y D ++KH
Sbjct: 674 L-AEDVSLEDIAEKAEGYTGADLEALVREATINAMRSIYSMCDKQSRDECKGNMECYQKH 732
Query: 807 IKPTLVRDDFSQAMHEF 823
IK + + F + +F
Sbjct: 733 IKECMNKTSFKVSKEDF 749
>sp|Q7ZU99|TERA_DANRE Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp
PE=1 SV=1
Length = 806
Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 138/413 (33%), Positives = 210/413 (50%), Gaps = 39/413 (9%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G + L+ +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERR----IVSQLLTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPNITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQV-------SSTSYLFII 977
AAPC+LFFDE DSIA R D G DRV+NQ+ SS +FII
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKKNVFII 620
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 75/127 (59%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG+ IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQV 968
R+V+Q+
Sbjct: 322 RRIVSQL 328
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 103/256 (40%), Gaps = 42/256 (16%)
Query: 553 VSSLSWMGTTASDVINR-IKVLLS-----PDSGLWFSTYHLPLPGHILIHGPPGSGKTSL 606
V +++W D + R ++ L+ PD L F P G +L +GPPG GKT L
Sbjct: 471 VPNITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMT--PSKG-VLFYGPPGCGKTLL 527
Query: 607 AKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQALSNFISEALDHAPSI 658
AKA+A C + KGP + + +A AP +
Sbjct: 528 AKAIANE--------------CQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCV 573
Query: 659 VIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQS 718
+ FD LDSI + G + + + L + MD K+ + + +
Sbjct: 574 LFFDELDSIAKARGGNVGDGGGAADRVINQILTE-MDGMSSKKN-------VFIIGATNR 625
Query: 719 LEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD-VASKCDGYD 777
+ I ++ GR D + +P P R AIL+ +++ + S ++ LD +A +G+
Sbjct: 626 PDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPI--SKDVDLDFLAKMTNGFS 683
Query: 778 AYDLEILVDRTVHAAV 793
DL + R A+
Sbjct: 684 GADLTEICQRACKLAI 699
>sp|Q6GL04|TERA_XENTR Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis
GN=vcp PE=2 SV=1
Length = 805
Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 138/413 (33%), Positives = 211/413 (51%), Gaps = 39/413 (9%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G V L + +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQL----LTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P ++ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
SD++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 SDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQV-------SSTSYLFII 977
AAPC+LFFDE DSIA R D G DRV+NQ+ S+ +FII
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFII 620
Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 74/127 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQV 968
R+V+Q+
Sbjct: 322 RRIVSQL 328
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 88/226 (38%), Gaps = 34/226 (15%)
Query: 576 PDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLE 635
PD L F P G +L +GPPG GKT LAKA+A C +
Sbjct: 500 PDKFLKFGMT--PSKG-VLFYGPPGCGKTLLAKAIANE--------------CQANFISI 542
Query: 636 KGPII--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALT 687
KGP + + +A AP ++ FD LDSI + G + +
Sbjct: 543 KGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN 602
Query: 688 KFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERK 747
+ L + MD K+ + + + + I ++ GR D + +P P R
Sbjct: 603 QILTE-MDGMSTKKN-------VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRI 654
Query: 748 AILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAV 793
AIL+ + R+S D L +A +G+ DL + R A+
Sbjct: 655 AILKANL-RKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAI 699
>sp|Q3ZBT1|TERA_BOVIN Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=2
SV=1
Length = 806
Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 137/413 (33%), Positives = 211/413 (51%), Gaps = 39/413 (9%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G + L+ +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERR----IVSQLLTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQV-------SSTSYLFII 977
AAPC+LFFDE DSIA R D G DRV+NQ+ S+ +FII
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFII 620
Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 74/127 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQV 968
R+V+Q+
Sbjct: 322 RRIVSQL 328
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 87/225 (38%), Gaps = 34/225 (15%)
Query: 576 PDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLE 635
PD L F P G +L +GPPG GKT LAKA+A C +
Sbjct: 500 PDKFLKFGMT--PSKG-VLFYGPPGCGKTLLAKAIANE--------------CQANFISI 542
Query: 636 KGPII--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALT 687
KGP + + +A AP ++ FD LDSI + G + +
Sbjct: 543 KGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN 602
Query: 688 KFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERK 747
+ L + MD K+ + + + + I ++ GR D + +P P R
Sbjct: 603 QILTE-MDGMSTKKN-------VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRV 654
Query: 748 AILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAA 792
AIL+ + R+S D L +A +G+ DL + R A
Sbjct: 655 AILKANL-RKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLA 698
>sp|Q01853|TERA_MOUSE Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp
PE=1 SV=4
Length = 806
Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 137/413 (33%), Positives = 211/413 (51%), Gaps = 39/413 (9%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G + L+ +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERR----IVSQLLTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQV-------SSTSYLFII 977
AAPC+LFFDE DSIA R D G DRV+NQ+ S+ +FII
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFII 620
Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 74/127 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQV 968
R+V+Q+
Sbjct: 322 RRIVSQL 328
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 87/225 (38%), Gaps = 34/225 (15%)
Query: 576 PDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLE 635
PD L F P G +L +GPPG GKT LAKA+A C +
Sbjct: 500 PDKFLKFGMT--PSKG-VLFYGPPGCGKTLLAKAIANE--------------CQANFISI 542
Query: 636 KGPII--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALT 687
KGP + + +A AP ++ FD LDSI + G + +
Sbjct: 543 KGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN 602
Query: 688 KFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERK 747
+ L + MD K+ + + + + I ++ GR D + +P P R
Sbjct: 603 QILTE-MDGMSTKKN-------VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRV 654
Query: 748 AILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAA 792
AIL+ + R+S D L +A +G+ DL + R A
Sbjct: 655 AILKANL-RKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLA 698
>sp|P55072|TERA_HUMAN Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP
PE=1 SV=4
Length = 806
Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 137/413 (33%), Positives = 211/413 (51%), Gaps = 39/413 (9%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G + L+ +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERR----IVSQLLTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQV-------SSTSYLFII 977
AAPC+LFFDE DSIA R D G DRV+NQ+ S+ +FII
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFII 620
Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 74/127 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQV 968
R+V+Q+
Sbjct: 322 RRIVSQL 328
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 87/225 (38%), Gaps = 34/225 (15%)
Query: 576 PDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLE 635
PD L F P G +L +GPPG GKT LAKA+A C +
Sbjct: 500 PDKFLKFGMT--PSKG-VLFYGPPGCGKTLLAKAIANE--------------CQANFISI 542
Query: 636 KGPII--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALT 687
KGP + + +A AP ++ FD LDSI + G + +
Sbjct: 543 KGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN 602
Query: 688 KFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERK 747
+ L + MD K+ + + + + I ++ GR D + +P P R
Sbjct: 603 QILTE-MDGMSTKKN-------VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRV 654
Query: 748 AILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAA 792
AIL+ + R+S D L +A +G+ DL + R A
Sbjct: 655 AILKANL-RKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLA 698
>sp|P46462|TERA_RAT Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus
GN=Vcp PE=1 SV=3
Length = 806
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 137/413 (33%), Positives = 211/413 (51%), Gaps = 39/413 (9%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G + L+ +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERR----IVSQLLTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQV-------SSTSYLFII 977
AAPC+LFFDE DSIA R D G DRV+NQ+ S+ +FII
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFII 620
Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 74/127 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQV 968
R+V+Q+
Sbjct: 322 RRIVSQL 328
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 87/225 (38%), Gaps = 34/225 (15%)
Query: 576 PDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLE 635
PD L F P G +L +GPPG GKT LAKA+A C +
Sbjct: 500 PDKFLKFGMT--PSKG-VLFYGPPGCGKTLLAKAIANE--------------CQANFISI 542
Query: 636 KGPII--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALT 687
KGP + + +A AP ++ FD LDSI + G + +
Sbjct: 543 KGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN 602
Query: 688 KFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERK 747
+ L + MD K+ + + + + I ++ GR D + +P P R
Sbjct: 603 QILTE-MDGMSTKKN-------VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRV 654
Query: 748 AILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAA 792
AIL+ + R+S D L +A +G+ DL + R A
Sbjct: 655 AILKANL-RKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLA 698
>sp|P23787|TERA_XENLA Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp
PE=1 SV=3
Length = 805
Score = 187 bits (475), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 133/397 (33%), Positives = 205/397 (51%), Gaps = 32/397 (8%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G + L+ +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERR----IVSQLLTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P ++ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
SD++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 SDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQV 968
AAPC+LFFDE DSIA R D G DRV+NQ+
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQI 604
Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 74/127 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQV 968
R+V+Q+
Sbjct: 322 RRIVSQL 328
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 102/268 (38%), Gaps = 48/268 (17%)
Query: 576 PDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLE 635
PD L F P G +L +GPPG GKT LAKA+A C +
Sbjct: 500 PDKFLKFGMT--PSKG-VLFYGPPGCGKTLLAKAIANE--------------CQANFISI 542
Query: 636 KGPII--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALT 687
KGP + + +A AP ++ FD LDSI + G + +
Sbjct: 543 KGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN 602
Query: 688 KFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERK 747
+ L + MD K+ + + + + I ++ GR D + +P P R
Sbjct: 603 QILTE-MDGMSIKKN-------VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRM 654
Query: 748 AILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHI 807
AIL+ + R+S D + +A +G+ DL + R A+ + ++ E+
Sbjct: 655 AILKANL-RKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERDR 713
Query: 808 K--------------PTLVRDDFSQAMH 821
+ P + RD F +AM
Sbjct: 714 QTNPSAMEVEEDDPVPEIRRDHFEEAMR 741
>sp|P03974|TERA_PIG Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1
SV=5
Length = 806
Score = 187 bits (474), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 136/413 (32%), Positives = 211/413 (51%), Gaps = 39/413 (9%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G + L+ +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERR----IVSQLLTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E + W+D+GGL D++ ++++++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQV-------SSTSYLFII 977
AAPC+LFFDE DSIA R D G DRV+NQ+ S+ +FII
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFII 620
Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 74/127 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQV 968
R+V+Q+
Sbjct: 322 RRIVSQL 328
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 87/225 (38%), Gaps = 34/225 (15%)
Query: 576 PDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLE 635
PD L F P G +L +GPPG GKT LAKA+A C +
Sbjct: 500 PDKFLKFGMT--PSKG-VLFYGPPGCGKTLLAKAIANE--------------CQANFISI 542
Query: 636 KGPII--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALT 687
KGP + + +A AP ++ FD LDSI + G + +
Sbjct: 543 KGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN 602
Query: 688 KFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERK 747
+ L + MD K+ + + + + I ++ GR D + +P P R
Sbjct: 603 QILTE-MDGMSTKKN-------VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRV 654
Query: 748 AILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAA 792
AIL+ + R+S D L +A +G+ DL + R A
Sbjct: 655 AILKANL-RKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLA 698
>sp|Q54CS8|PEX6_DICDI Peroxisomal biogenesis factor 6 OS=Dictyostelium discoideum GN=pex6
PE=3 SV=1
Length = 1201
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 208/392 (53%), Gaps = 33/392 (8%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEAL 652
+L++GP G GK +L VAK + H+ V C +L + N + +A
Sbjct: 670 LLLNGPQGVGKRTLLNRVAKQMG------IHVYEVDCYKLYDFVESKKDWNIRNVLEQAS 723
Query: 653 DHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIG--PI 710
+ P+++I N + + ++ + + ++ L++ L++I+ + + S+ P+
Sbjct: 724 NSTPTLLILKNFEVLEQTAQSMQQEKKESN---LSQTLINILKDINDSNTSNINSNKYPL 780
Query: 711 AFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDV 769
+ S++++ + F + L +P ++R IL++ + ++ + + + ++
Sbjct: 781 IITVTVNSMDELSNKV--RNWFKHEITLNSPDENQRFKILKYLTKNLPIDIGNTVSIKNL 838
Query: 770 ASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPT--------LVRDDFSQAMH 821
+ + + +L L+ R+ A+ R L IKP ++ DD +++
Sbjct: 839 SIRTASFLNSNLRALIQRSSINALKRVLSIQQMMNDEIKPIEIYNCGFLVMGDDIQKSLS 898
Query: 822 EFLPVAMRDITKTSAEGGR---SGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLR 878
E M++ +S + WDDVGGL ++++ I + I+LP + P++FA + R
Sbjct: 899 E-----MQEYQSSSIGAPKIPNVSWDDVGGLANVKSEIMDTIQLPLEHPHLFASG-IGKR 952
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
S +LL+GPPG GKT + A A CSL F+SVKGPEL+N YIG SE+ +R+IF+KA A P
Sbjct: 953 SGILLFGPPGTGKTLLAKAIATECSLNFLSVKGPELINMYIGESEKNIREIFNKARQAKP 1012
Query: 939 CLLFFDEFDSIAPKRGH--DNTGVTDRVVNQV 968
C++FFDE DS+AP RG+ D+ GV DRVV+Q+
Sbjct: 1013 CVIFFDELDSLAPSRGNGADSGGVMDRVVSQL 1044
>sp|Q7KN62|TERA_DROME Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila
melanogaster GN=TER94 PE=1 SV=1
Length = 801
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/397 (32%), Positives = 203/397 (51%), Gaps = 32/397 (8%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 227 FKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 284
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA ++P+I+ D +D+I + D + +++ L+D M +
Sbjct: 285 KAFE----EAEKNSPAIIFIDEIDAI-APKRDKTHGEVERRIVSQLLTLMDGM------K 333
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
KSS I +A+ I +L GRFD + + P A+ R +L I ++++
Sbjct: 334 KSSHLI----VMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLR--IHTKNMKL 387
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
D++ L+ +A++ G+ DL L + + D + + +L +
Sbjct: 388 HDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDDKIDAEVLASLAVTME 447
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F AM + P A+R+ T E + W D+GGL ++ ++E+++ P + P+ F +
Sbjct: 448 NFRYAMTKSSPSALRE---TVVEVPNTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFG 504
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
++ VL YGPPGCGKT + A A C FISVKGPELL + G SE VRDIF KA
Sbjct: 505 MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKAR 564
Query: 935 AAAPCLLFFDEFDSIAPKRG---HDNTGVTDRVVNQV 968
+AAPC+LFFDE DSIA RG D G DRV+NQ+
Sbjct: 565 SAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQI 601
Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 75/127 (59%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P++F ++ +L+YGPPG GKT I A A
Sbjct: 199 GYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANE 258
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A +P ++F DE D+IAPKR + V
Sbjct: 259 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKTHGEVE 318
Query: 962 DRVVNQV 968
R+V+Q+
Sbjct: 319 RRIVSQL 325
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 96/239 (40%), Gaps = 34/239 (14%)
Query: 576 PDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLE 635
PD L F P G +L +GPPG GKT LAKA+A C +
Sbjct: 497 PDKFLKFGMQ--PSRG-VLFYGPPGCGKTLLAKAIANE--------------CQANFISV 539
Query: 636 KGPII--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALT 687
KGP + + + +A AP ++ FD LDSI + G + +
Sbjct: 540 KGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVIN 599
Query: 688 KFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERK 747
+ L + MD G K+ + + + + I ++ GR D + +P P R+
Sbjct: 600 QILTE-MDGMGAKKN-------VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSRE 651
Query: 748 AILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKH 806
AIL+ + R+S + L +A G+ DL + R A+ + + ++ EK
Sbjct: 652 AILKANL-RKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAIEAEIRREKE 709
>sp|P54812|TERA2_CAEEL Transitional endoplasmic reticulum ATPase homolog 2
OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2
Length = 810
Score = 183 bits (465), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 127/397 (31%), Positives = 199/397 (50%), Gaps = 32/397 (8%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL+ GPPG+GKT +A+AVA L+ + S++S E +R
Sbjct: 235 FKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKMSGESESNLR 292
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A + E ++P+I+ D +D+I G + L+ +MD G K
Sbjct: 293 KAFA----ECEKNSPAILFIDEIDAIAPKREKAHGEVEKR----IVSQLLTLMD--GLKT 342
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD + + P A R IL I ++++
Sbjct: 343 RAH-----VVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILR--IHTKNMKL 395
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+++ L+ VA++C G+ DL L + + D + + + +L +
Sbjct: 396 GEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDDTIDAEVLNSLAVTME 455
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F AM + P A+R+ E + W D+GGL +++ ++E+++ P + P + +
Sbjct: 456 NFRFAMGKSSPSALREAV---VETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFG 512
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
++ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VRD+F KA
Sbjct: 513 MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKAR 572
Query: 935 AAAPCLLFFDEFDSIAPKRG---HDNTGVTDRVVNQV 968
AAAPC+LFFDE DSIA RG D G DRV+NQV
Sbjct: 573 AAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQV 609
Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 75/127 (59%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG+ IKEM+ELP + P +F ++ +LL+GPPG GKT I A A
Sbjct: 207 GYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANE 266
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F++ +P +LF DE D+IAPKR + V
Sbjct: 267 TGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKAHGEVE 326
Query: 962 DRVVNQV 968
R+V+Q+
Sbjct: 327 KRIVSQL 333
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 92/240 (38%), Gaps = 37/240 (15%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQAL 644
+L +GPPG GKT LAKA+A C + KGP + +
Sbjct: 519 VLFYGPPGCGKTLLAKAIANE--------------CQANFISIKGPELLTMWFGESEANV 564
Query: 645 SNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSS 704
+ +A AP ++ FD LDSI + G + + + L + MD K+
Sbjct: 565 RDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTE-MDGMNAKKN-- 621
Query: 705 CGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDE 764
+ + + + I ++ GR D + +P P + R I + +++ L +D
Sbjct: 622 -----VFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPL-SADL 675
Query: 765 ILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHEFL 824
L +A G+ DL + R A+ S E+ I+ R D S E +
Sbjct: 676 DLNFLAKNTVGFSGADLTEICQRACKLAI------RESIEREIRQEKERQDRSARGEELM 729
>sp|P25694|CDC48_YEAST Cell division control protein 48 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC48 PE=1 SV=3
Length = 835
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/402 (33%), Positives = 200/402 (49%), Gaps = 42/402 (10%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFV-----CCSRLSLEK 636
F + P +L++GPPG+GKT +A+AVA F+ S+++ E
Sbjct: 240 FKAIGIKPPRGVLMYGPPGTGKTLMARAVANE-------TGAFFFLINGPEVMSKMAGES 292
Query: 637 GPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDE 696
+R+A EA +AP+I+ D +DSI + D + V++ L+ +MD
Sbjct: 293 ESNLRKAFE----EAEKNAPAIIFIDEIDSI-APKRDKTNGEVERRVVSQ---LLTLMD- 343
Query: 697 YGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQR 756
G K +S+ + +A+ I +L GRFD V + P A+ R +L I
Sbjct: 344 -GMKARSN-----VVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLR--IHT 395
Query: 757 RSLECSDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVR-- 813
++++ +D++ L+ +A++ GY D+ L + + E I ++
Sbjct: 396 KNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDEDEIDAEVLDSL 455
Query: 814 ----DDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNI 869
D+F A+ P A+R+ T E WDDVGGL +I+ +KE +E P P+
Sbjct: 456 GVTMDNFRFALGNSNPSALRE---TVVESVNVTWDDVGGLDEIKEELKETVEYPVLHPDQ 512
Query: 870 FAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDI 929
+ + L VL YGPPG GKT + A A S FISVKGPELL+ + G SE +RDI
Sbjct: 513 YTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDI 572
Query: 930 FSKATAAAPCLLFFDEFDSIAPKRG---HDNTGVTDRVVNQV 968
F KA AAAP ++F DE DSIA RG D G +DRVVNQ+
Sbjct: 573 FDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQL 614
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 74/127 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG I+EM+ELP + P +F ++ VL+YGPPG GKT + A A
Sbjct: 212 GYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANE 271
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR N V
Sbjct: 272 TGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKTNGEVE 331
Query: 962 DRVVNQV 968
RVV+Q+
Sbjct: 332 RRVVSQL 338
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 103/246 (41%), Gaps = 36/246 (14%)
Query: 573 LLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRL 632
+L PD ++ + L +L +GPPG+GKT LAKAVA + + F+
Sbjct: 507 VLHPDQ---YTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSAN--------FISV--- 552
Query: 633 SLEKGPII--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVI 684
KGP + + + +A AP++V D LDSI + G S
Sbjct: 553 ---KGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDR 609
Query: 685 ALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAAS 744
+ + L + MD K+ + + + ++I ++ GR D + +P P +
Sbjct: 610 VVNQLLTE-MDGMNAKKN-------VFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDEN 661
Query: 745 ERKAILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYL--HSDSS 802
R +IL ++++ LE E L +A G+ DL +V R A+ + H
Sbjct: 662 ARLSILNAQLRKTPLEPGLE-LTAIAKATQGFSGADLLYIVQRAAKYAIKDSIEAHRQHE 720
Query: 803 FEKHIK 808
EK +K
Sbjct: 721 AEKEVK 726
>sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2
SV=1
Length = 807
Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/419 (31%), Positives = 199/419 (47%), Gaps = 51/419 (12%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC------SRLSLE 635
F + + P IL++GPPGSGKT +A+AVA F C S+L+ E
Sbjct: 234 FKSIGVKPPKGILLYGPPGSGKTLIARAVANE--------TGAFFFCINGPEIMSKLAGE 285
Query: 636 KGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMD 695
+R+A EA +APSI+ D +DSI G V L + +MD
Sbjct: 286 SESNLRKAFE----EAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQL----LTLMD 337
Query: 696 EYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQ 755
G K ++ + + + I +L GRFD + + P R +L I
Sbjct: 338 --GLKSRAH-----VIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLR--IH 388
Query: 756 RRSLECSDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPT 810
++++ SD++ L+ +A GY DL L + + D + + + +
Sbjct: 389 TKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNS 448
Query: 811 L--VRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 868
+ + F A+ P A+R+ T E W+D+GGL +++ ++E ++ P + P
Sbjct: 449 MAVTNEHFQTALGTSNPSALRE---TVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPE 505
Query: 869 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 928
F + + VL YGPPGCGKT + A A C FISVKGPELL + G SE VR+
Sbjct: 506 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRE 565
Query: 929 IFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQ-------VSSTSYLFII 977
IF KA +APC+LFFDE DSIA +RG D G DRV+NQ +S+ +FII
Sbjct: 566 IFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFII 624
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 75/127 (59%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DDVGG+ I+E++ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 206 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 265
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR + V
Sbjct: 266 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVE 325
Query: 962 DRVVNQV 968
R+V+Q+
Sbjct: 326 RRIVSQL 332
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 86/232 (37%), Gaps = 31/232 (13%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + + +L +GPPG GKT LAKA+A C + KGP +
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE--------------CQANFISVKGPELL 552
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
+ +A AP ++ FD LDSI + G + L + L +
Sbjct: 553 TMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTE- 611
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
MD K+ + + + + I +L GR D + +P P R I +
Sbjct: 612 MDGMSAKKT-------VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKAC 664
Query: 754 IQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEK 805
+ R+S + L +A G+ D+ + R A+ + D E+
Sbjct: 665 L-RKSPIAKNVDLRALARHTQGFSGADITEICQRACKYAIRENIEKDIERER 715
>sp|Q9LZF6|CD48E_ARATH Cell division control protein 48 homolog E OS=Arabidopsis thaliana
GN=CDC48E PE=1 SV=2
Length = 810
Score = 179 bits (455), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 130/403 (32%), Positives = 194/403 (48%), Gaps = 44/403 (10%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC------SRLSLE 635
F + + P IL++GPPGSGKT +A+AVA F C S+L+ E
Sbjct: 233 FKSIGVKPPKGILLYGPPGSGKTLIARAVANE--------TGAFFFCINGPEIMSKLAGE 284
Query: 636 KGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMD 695
+R+A EA +APSI+ D +DSI G + L+ +MD
Sbjct: 285 SESNLRKAFE----EAEKNAPSIIFIDEIDSIAPKREKTNGEVERR----IVSQLLTLMD 336
Query: 696 EYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQ 755
G K ++ + + + I +L GRFD + + P R +L I
Sbjct: 337 --GLKSRAH-----VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR--IH 387
Query: 756 RRSLECSDEILLDVASK-CDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPT 810
++++ ++++ L+ SK GY DL L + + D S + I +
Sbjct: 388 TKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNS 447
Query: 811 LV--RDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 868
+ + F A+ P A+R+ T E W+D+GGL +++ ++E ++ P + P
Sbjct: 448 MAVSNEHFHTALGNSNPSALRE---TVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPE 504
Query: 869 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 928
F + + VL YGPPGCGKT + A A C FISVKGPELL + G SE VR+
Sbjct: 505 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRE 564
Query: 929 IFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQV 968
IF KA +APC+LFFDE DSIA +RG+ D G DRV+NQ+
Sbjct: 565 IFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQL 607
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 75/127 (59%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DDVGG+ I+E++ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 205 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 264
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR N V
Sbjct: 265 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVE 324
Query: 962 DRVVNQV 968
R+V+Q+
Sbjct: 325 RRIVSQL 331
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 92/249 (36%), Gaps = 37/249 (14%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + + +L +GPPG GKT LAKA+A C + KGP +
Sbjct: 506 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE--------------CQANFISVKGPELL 551
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
+ +A AP ++ FD LDSI + + G + L + L +
Sbjct: 552 TMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTE- 610
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
MD K+ + + + + I +L GR D + +P P R I +
Sbjct: 611 MDGMNAKKT-------VFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAC 663
Query: 754 IQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVR 813
+ R+S D + +A G+ D+ + R A+ + D E+ R
Sbjct: 664 L-RKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIRENIEKDIENERR------R 716
Query: 814 DDFSQAMHE 822
+AM E
Sbjct: 717 SQNPEAMEE 725
>sp|Q9SCN8|CD48D_ARATH Cell division control protein 48 homolog D OS=Arabidopsis thaliana
GN=CDC48D PE=1 SV=1
Length = 815
Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/403 (32%), Positives = 193/403 (47%), Gaps = 44/403 (10%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC------SRLSLE 635
F + + P IL++GPPGSGKT +A+AVA F C S+L+ E
Sbjct: 234 FKSIGVKPPKGILLYGPPGSGKTLIARAVANE--------TGAFFFCINGPEIMSKLAGE 285
Query: 636 KGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMD 695
+R+A EA +APSI+ D +DSI G + L+ +MD
Sbjct: 286 SESNLRKAFE----EAEKNAPSIIFIDEIDSIAPKREKTHGEVERR----IVSQLLTLMD 337
Query: 696 EYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQ 755
G K ++ + + + I +L GRFD + + P R +L I
Sbjct: 338 --GLKSRAH-----VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR--IH 388
Query: 756 RRSLECSDEILLDVASK-CDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPT 810
++++ ++++ L+ SK GY DL L + + D + I +
Sbjct: 389 TKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDDEEIDAEILNS 448
Query: 811 LV--RDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 868
+ D F A+ P A+R+ T E W+D+GGL +++ ++E ++ P + P
Sbjct: 449 MAVSNDHFQTALGNSNPSALRE---TVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPE 505
Query: 869 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 928
F + + VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+
Sbjct: 506 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRE 565
Query: 929 IFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQV 968
IF KA +APC+LFFDE DSIA +RG+ D G DRV+NQ+
Sbjct: 566 IFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQL 608
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 75/127 (59%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DDVGG+ I+E++ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 206 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 265
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR + V
Sbjct: 266 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVE 325
Query: 962 DRVVNQV 968
R+V+Q+
Sbjct: 326 RRIVSQL 332
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 88/232 (37%), Gaps = 31/232 (13%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + + +L +GPPG GKT LAKA+A C + KGP +
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE--------------CQANFISIKGPELL 552
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
+ +A AP ++ FD LDSI + + G + L + L +
Sbjct: 553 TMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTE- 611
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
MD K+ + + + + I +L GR D + +P P R I +
Sbjct: 612 MDGMNAKKT-------VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSC 664
Query: 754 IQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEK 805
+ R+S D L +A G+ D+ + R+ A+ + D E+
Sbjct: 665 L-RKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIEKDIEKER 715
>sp|Q8SSJ5|CDC48_ENCCU Cell division control protein 48 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=CDC48 PE=1 SV=1
Length = 780
Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 205/398 (51%), Gaps = 31/398 (7%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
+S + P IL++GPPG+GKT +A+A+A L+ + S+++ E +R
Sbjct: 234 YSKIGVKPPKGILLYGPPGTGKTLIARAIANETGAFLFLINGPEIM--SKMAGESESNLR 291
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA ++P+I+ D +D++ E SQ +++ L +MD G K
Sbjct: 292 KAFE----EAEKNSPAIIFIDEIDALAPKR---EKSQGEVERRIVSQLLT-LMD--GMKA 341
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+S+ + + + I +L GRFD +++ P + R IL I ++++
Sbjct: 342 RSN-----VIVLGATNRPNSIDPALRRYGRFDREIEIGVPDETGRLEILR--IHTKNMKM 394
Query: 762 SDEI-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYL-HSDSSFEKHIKPTLVR-----D 814
S+++ L+ + + G+ DL L + L D EK L +
Sbjct: 395 SEDVDLVAINKELHGFTGSDLASLCSEAALQQIREKLPQIDLDSEKIDAKVLASLKVNSE 454
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F A+ P ++R+ T + W D+GGL ++ ++E ++ P ++P F +
Sbjct: 455 NFRYAIEHTDPSSLRE---TVIQSPNVKWSDIGGLEQVKQELRETVQYPVEYPEKFIKFG 511
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL+ ++G SE +RD+F++A
Sbjct: 512 MTPAKGVLFYGPPGCGKTLLAKAVATECKANFISIKGPELLSMWVGESESNIRDLFARAR 571
Query: 935 AAAPCLLFFDEFDSIAPKR-GHD-NTGVTDRVVNQVSS 970
AAPC+LFFDE DSIA R G+D ++G TDR++NQ+ S
Sbjct: 572 GAAPCVLFFDEIDSIAKARSGNDGSSGATDRMLNQLLS 609
Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 73/127 (57%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DDVGG I+E++ELP + ++++ ++ +LLYGPPG GKT I A A
Sbjct: 206 GYDDVGGCRAQMAKIRELVELPLRHSQLYSKIGVKPPKGILLYGPPGTGKTLIARAIANE 265
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
+ GPE+++K G SE +R F +A +P ++F DE D++APKR V
Sbjct: 266 TGAFLFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDALAPKREKSQGEVE 325
Query: 962 DRVVNQV 968
R+V+Q+
Sbjct: 326 RRIVSQL 332
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 34/210 (16%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQAL 644
+L +GPPG GKT LAKAVA C + KGP + +
Sbjct: 518 VLFYGPPGCGKTLLAKAVATE--------------CKANFISIKGPELLSMWVGESESNI 563
Query: 645 SNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSS 704
+ + A AP ++ FD +DSI + S +GS +T + L + L + MD +K+
Sbjct: 564 RDLFARARGAAPCVLFFDEIDSIAKARSGNDGSSGATDRM-LNQLLSE-MDGINQKKN-- 619
Query: 705 CGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDE 764
+ + + +++ +L GR D V +P P R +IL+ +++ L S E
Sbjct: 620 -----VFVIGATNRPDQLDSALMRPGRLDQLVYIPLPDLDSRVSILQATLKKTPL--SPE 672
Query: 765 I-LLDVASKCDGYDAYDLEILVDRTVHAAV 793
I L +A D + DL + R A+
Sbjct: 673 IDLRQLAEATDKFSGADLSEICQRACKLAI 702
>sp|Q5AWS6|CDC48_EMENI Cell division control protein 48 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=cdc48 PE=1 SV=2
Length = 823
Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 130/413 (31%), Positives = 204/413 (49%), Gaps = 38/413 (9%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + + P IL++GPPG+GKT +A+AVA L+ + S+++ E +R
Sbjct: 251 FKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIM--SKMAGESESNLR 308
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA ++P+I+ D +DSI G V L + +MD G K
Sbjct: 309 KAFE----EAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQL----LTLMD--GMKA 358
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+S+ + +A+ I +L GRFD V + P + R IL I ++++
Sbjct: 359 RSN-----VVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILS--IHTKNMKL 411
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+++ L+ +A++ GY DL L + + + + + + +L +
Sbjct: 412 GEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTME 471
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F A+ P A+R++ R W+D+GGL +++ + E ++ P P F +
Sbjct: 472 NFRYALGVSNPSALREVAVVEVPNVR--WEDIGGLEEVKRELIESVQYPVDHPEKFQKFG 529
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
L VL YGPPG GKT + A A C+ FISVKGPELL+ + G SE +RDIF KA
Sbjct: 530 LSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKAR 589
Query: 935 AAAPCLLFFDEFDSIAPKRG---HDNTGVTDRVVNQ-------VSSTSYLFII 977
AAAPC++F DE DSIA RG D G +DRVVNQ ++S +F+I
Sbjct: 590 AAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVI 642
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 74/127 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG I+E++ELP + P +F ++ +L+YGPPG GKT + A A
Sbjct: 223 GYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANE 282
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A +P ++F DE DSIAPKR N V
Sbjct: 283 TGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVE 342
Query: 962 DRVVNQV 968
RVV+Q+
Sbjct: 343 RRVVSQL 349
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 97/233 (41%), Gaps = 31/233 (13%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + L +L +GPPG+GKT LAKAVA C + KGP +
Sbjct: 525 FQKFGLSPSRGVLFYGPPGTGKTMLAKAVANE--------------CAANFISVKGPELL 570
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
+ + +A AP +V D LDSI S G S + + L +
Sbjct: 571 SMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTE- 629
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
MD K+ + + + E++ +L GR D V +P P + R+ IL+ +
Sbjct: 630 MDGMTSKKN-------VFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQASREGILKAQ 682
Query: 754 IQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKH 806
+ R++ SD + +ASK G+ DL + R V A+ + ++ +K
Sbjct: 683 L-RKTPVASDVDIEFIASKTHGFSGADLGFVTQRAVKLAIKESISAEIERQKQ 734
>sp|Q8RY16|PEX6_ARATH Peroxisome biogenesis protein 6 OS=Arabidopsis thaliana GN=PEX6
PE=1 SV=1
Length = 941
Score = 177 bits (448), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 151/461 (32%), Positives = 224/461 (48%), Gaps = 62/461 (13%)
Query: 565 DVINRIKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHI 624
+ +N + +LSP L S L +L+HG PG GK ++ K VA+ L H+
Sbjct: 354 ETVNILASVLSPP--LCPSALASKLRVAVLLHGIPGCGKRTVVKYVARRLG------LHV 405
Query: 625 VFVCCSRLSLEKGPIIRQALSNFISEALDHAPSIV------IFDNLDSIISSSSDPEG-S 677
V C L AL+ + A ++P+I+ +F NL S S D G S
Sbjct: 406 VEFSCHSLLASSERKTSTALAQTFNMARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVS 465
Query: 678 QPSTSVI-ALTKFLVD---IMDEYGEKRKSSCGIGP-----IAFVASAQSLEKIPQSLTS 728
SVI LT+ + + M+E S +G + +ASA+S E I ++
Sbjct: 466 FEIASVIRELTEPVSNGDSSMEEKSNSNFSENEVGKFRGHQVLLIASAESTEGISPTIRR 525
Query: 729 SGRFDFHVQLPAPAASERKAILEHEIQRRSL---ECSDEILLDVASKCDGYDAYDLEILV 785
F +++ + +R +L +Q S SDE + + + G+ DL+ LV
Sbjct: 526 C--FSHEIRMGSLNDEQRSEMLSQSLQGVSQFLNISSDEFMKGLVGQTSGFLPRDLQALV 583
Query: 786 -DRTVHAAV-----------------GRYLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVA 827
D + + G +H S + + ++DF++A+
Sbjct: 584 ADAGANLYISQESETKKINSLSDDLHGVDIHQASQIDNSTEKLTAKEDFTKALDR---SK 640
Query: 828 MRDITKTSA-EGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGP 886
R+ + A + WDDVGGL D++ +I + ++LP ++F+ LR RS VLLYGP
Sbjct: 641 KRNASALGAPKVPNVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSSG-LRKRSGVLLYGP 699
Query: 887 PGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEF 946
PG GKT + A A CSL F+SVKGPEL+N YIG SE+ VRDIF KA +A PC++FFDE
Sbjct: 700 PGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDEL 759
Query: 947 DSIAPKRG--HDNTGVTDRVVNQV--------SSTSYLFII 977
DS+AP RG D+ GV DRVV+Q+ S+ LFII
Sbjct: 760 DSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSSQDLFII 800
>sp|Q96372|CDC48_CAPAN Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP
PE=2 SV=1
Length = 805
Score = 176 bits (446), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/403 (32%), Positives = 193/403 (47%), Gaps = 44/403 (10%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC------SRLSLE 635
F + + P IL++GPPGSGKT +A+AVA F C S+L+ E
Sbjct: 234 FKSIGVKPPKGILLYGPPGSGKTLIARAVANE--------TGAFFFCINGPEIMSKLAGE 285
Query: 636 KGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMD 695
+R+A EA +APSI+ D +DSI G + L+ +MD
Sbjct: 286 SESNLRKAFE----EAEKNAPSIIFIDEIDSIAPKREKTHGEVERR----IVSQLLTLMD 337
Query: 696 EYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQ 755
G K ++ + + + I +L GRFD + + P R +L I
Sbjct: 338 --GLKSRAH-----VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLG--IH 388
Query: 756 RRSLECSDEILLDVASK-CDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPT 810
++++ ++E+ L+ SK GY DL L + + D + + + +
Sbjct: 389 TKNMKLAEEVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVLDLEDDTIDAEVLNS 448
Query: 811 L--VRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 868
+ + F A+ P A+R+ T E W+D+GGL +++ ++E ++ P + P
Sbjct: 449 MAVTNEHFQTALGTSNPSALRE---TVVEVPNVSWEDIGGLENVKRELQETVQYPVEPPE 505
Query: 869 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 928
F + + VL YGPPGCGKT + A A C FISVKGPELL + G SE VR+
Sbjct: 506 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRE 565
Query: 929 IFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQV 968
IF KA +APC+LFFDE DSIA +RG D G DRV+NQ+
Sbjct: 566 IFDKARQSAPCVLFFDELDSIATQRGSSSGDAGGAADRVLNQL 608
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 75/127 (59%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DDVGG+ I+E++ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 206 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 265
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR + V
Sbjct: 266 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVE 325
Query: 962 DRVVNQV 968
R+V+Q+
Sbjct: 326 RRIVSQL 332
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 86/233 (36%), Gaps = 31/233 (13%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + + +L +GPPG GKT LAKA+A C + KGP +
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE--------------CQANFISVKGPELL 552
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
+ +A AP ++ FD LDSI + G + L + L +
Sbjct: 553 TMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSSGDAGGAADRVLNQLLTE- 611
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
MD K+ + + + + I +L GR D + +P P R I +
Sbjct: 612 MDGMNAKKT-------VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKAC 664
Query: 754 IQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKH 806
+++ L D L +A G+ D+ + R A+ + D EK
Sbjct: 665 LRKSPL-SKDIDLRALAKHTQGFSGADVTEICQRACKYAIRENIEKDIEREKR 716
>sp|O60058|AFG2_SCHPO ATPase family gene 2 protein OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=afg2 PE=3 SV=1
Length = 809
Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 142/497 (28%), Positives = 213/497 (42%), Gaps = 86/497 (17%)
Query: 546 TQGFDSNVSSLSWM---GTTASDVINRIKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSG 602
TQ FD S++++ G A R V L + F +++ P +L++GPPG+G
Sbjct: 266 TQNFDGPPSAVTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTG 325
Query: 603 KTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQALSNFISEALDH 654
KT + +AVA VF GP + L +A H
Sbjct: 326 KTMVMRAVAAEANAQ-------VFTI-------DGPSVVGKYLGETESRLRKIFEDARAH 371
Query: 655 APSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVA 714
PSI+ D +D++ ++ + S+ + +A L+D M G + +A
Sbjct: 372 QPSIIFIDEIDALAPKRTE-DVSEAESRAVATLLTLLDGM----------ANAGKVVVIA 420
Query: 715 SAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASKCD 774
+ I ++L GR + +++ P S R I++ + E +D L D+AS+
Sbjct: 421 ATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSGVPNEINDAQLEDLASRTH 480
Query: 775 GYDAYDLEILVDRTVHAAVGRY--LHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMRDIT 832
Y DL +V A+ R L D+S I + DD A+ AMR+
Sbjct: 481 AYVGADLAAVVREAALRAIKRTISLQKDTSG-LDIFGAVQMDDLEFALSSVRQSAMREFM 539
Query: 833 KTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKT 892
E W D+GG +++ +KE +E P F++ +R VLLYGPPGC KT
Sbjct: 540 ---MESPNVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKT 596
Query: 893 HIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPK 952
A A L FI+VKGPEL +K++G SE+AVR +F KA A+P ++FFDE D++
Sbjct: 597 ITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALTAN 656
Query: 953 RGHDNTGVTDRVVNQVSSTSYLFIIYFWEVGKKEGVVPYDIYILVNFLISACPCFQQFLT 1012
RG DN+ +DRVV L
Sbjct: 657 RGEDNS--SDRVV------------------------------------------AALLN 672
Query: 1013 ELDGVEVLTGVFVFAAT 1029
ELDG+E L V V AAT
Sbjct: 673 ELDGIEALRNVLVLAAT 689
>sp|Q13608|PEX6_HUMAN Peroxisome assembly factor 2 OS=Homo sapiens GN=PEX6 PE=1 SV=2
Length = 980
Score = 173 bits (438), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 146/449 (32%), Positives = 220/449 (48%), Gaps = 59/449 (13%)
Query: 554 SSLSWMGTTA--SDVINRIKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVA 611
SSLS G A S++ +K L P L T +L+ GPPG GKT++ VA
Sbjct: 431 SSLSPPGLEALVSELCAVLKPRLQPGGALLTGTSS------VLLRGPPGCGKTTV---VA 481
Query: 612 KSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSS 671
+ H L H++ V CS L E + L S A P++++ +D +
Sbjct: 482 AACSH---LGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCRPAVLLLTAVDLL---G 535
Query: 672 SDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGR 731
D +G V+A+ + L+ E +SC P+ VA+ + +P + ++
Sbjct: 536 RDRDGLGEDARVMAVLRHLL-----LNEDPLNSCP--PLMVVATTSRAQDLPADVQTA-- 586
Query: 732 FDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDVASKCDGYDAYDLEILVDRTVH 790
F +++PA + +R +IL L E+ L +A +C G+ DL L+ +
Sbjct: 587 FPHELEVPALSEGQRLSILRALTAH--LPLGQEVNLAQLARRCAGFVVGDLYALLTHSSR 644
Query: 791 AAVGRYLHS---------DSSFEKHIKPTLVRDDFSQAMHEFLPVAMRDITKTSAEGGRS 841
AA R +S D L+ +DF QA+ + + A G
Sbjct: 645 AACTRIKNSGLAGGLTEEDEGELCAAGFPLLAEDFGQALEQL------QTAHSQAVGAPK 698
Query: 842 ----GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGA 897
W DVGGL +++ I E I+LP + P + + RS +LL+GPPG GKT + A
Sbjct: 699 IPSVSWHDVGGLQEVKKEILETIQLPLEHPELLSLG--LRRSGLLLHGPPGTGKTLLAKA 756
Query: 898 AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH-- 955
A CSL F+SVKGPEL+N Y+G SE+ VR++F++A AAAPC++FFDE DS+AP RG
Sbjct: 757 VATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSG 816
Query: 956 DNTGVTDRVVNQ-------VSSTSYLFII 977
D+ GV DRVV+Q + ST +F+I
Sbjct: 817 DSGGVMDRVVSQLLAELDGLHSTQDVFVI 845
>sp|O13764|PEX6_SCHPO Peroxisomal ATPase pex6 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=pex6 PE=3 SV=1
Length = 948
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/407 (31%), Positives = 200/407 (49%), Gaps = 44/407 (10%)
Query: 589 LPGH---ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCS-RLSLEKGPIIRQAL 644
+PG L+HG P +GKT K++E L + VF S + + L
Sbjct: 418 VPGFNPFFLLHGNPFTGKT-------KAVEEVASLFSAPVFTISSYEFADATADHLEAKL 470
Query: 645 SNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSS 704
F+ + +I+ +LD ++S SSD P + I + +D++
Sbjct: 471 DMFVQNVVKSPCAIIFVKDLD-VLSISSDEGNIVPGSKSIQILLSKIDLV---------K 520
Query: 705 CGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDE 764
G + + S+EKIP + S F+ ++ ER +L+ I ++
Sbjct: 521 SPQGRYIVIGTCHSIEKIPYEILSESFFE--LKFSELEMDERLELLK--IYANNVIIDKR 576
Query: 765 I-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHI--KPTLVRDDFSQAMH 821
I L DVA K + +LE L D AAV R + + I P + D +++
Sbjct: 577 ISLKDVALKTNSMSFGELECLPDHMTKAAVDRIKRTGYDNDSIILSGPIITEQDVDVSIN 636
Query: 822 EFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNV 881
++ + T + WDD+GGL + + +++ ++LP +FP +F+Q L+ RS V
Sbjct: 637 RI----RKEKSNTIFTVPKVNWDDIGGLEEAKTVLRDTLQLPLQFPELFSQG-LKPRSGV 691
Query: 882 LLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLL 941
LLYGPPG GKT + A A SL F+S+KGPELLN Y+G SE VR++F KA ++PC++
Sbjct: 692 LLYGPPGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVI 751
Query: 942 FFDEFDSIAPKRGH--DNTGVTDRVVNQV---------SSTSYLFII 977
FFDE DSIAP RG+ D+ V DRVV+Q+ + Y+F+I
Sbjct: 752 FFDELDSIAPHRGNSSDSGNVMDRVVSQLLAELDSISKDNNKYVFVI 798
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 90/213 (42%), Gaps = 32/213 (15%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQAL 644
+L++GPPG+GKT LAKAVA L + FV KGP + +
Sbjct: 691 VLLYGPPGTGKTLLAKAVATELS--------LEFVSI------KGPELLNMYVGESEANV 736
Query: 645 SNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSS 704
N +A + +P ++ FD LDSI P S S + + + ++ E K +
Sbjct: 737 RNVFEKARNSSPCVIFFDELDSIA-----PHRGNSSDSGNVMDRVVSQLLAELDSISKDN 791
Query: 705 CGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDE 764
+ + + + + SL GRFD V L + E KA + + ++ + +
Sbjct: 792 NKY--VFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKASMLRALT-KTFKLDET 848
Query: 765 I-LLDVASKC-DGYDAYDLEILVDRTVHAAVGR 795
I L ++A C + D+ L V +A+ R
Sbjct: 849 IDLNEIAKNCHPNFTGADMYALCSDAVLSAIKR 881
>sp|Q99LC9|PEX6_MOUSE Peroxisome assembly factor 2 OS=Mus musculus GN=Pex6 PE=2 SV=1
Length = 981
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 133/408 (32%), Positives = 203/408 (49%), Gaps = 51/408 (12%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEAL 652
+L+ GPPGSGKT+ A L H++ V CS L + + L S A
Sbjct: 467 VLLQGPPGSGKTTAVTAACSRLG------LHLLKVPCSSLCADSSRAVETKLQATFSRAR 520
Query: 653 DHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAF 712
P++++ +D + D +G V A + L ++DE R P+
Sbjct: 521 RCRPAVLLLTAVDLL---GRDRDGLGEDARVAATLRHL--LLDEDALSR-----CPPLMV 570
Query: 713 VASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDVAS 771
VA+ ++ +P + ++ F +++P + ++R +IL+ L E+ L +A
Sbjct: 571 VATTSRVQDLPTDVQTA--FPHELEVPVLSEAQRLSILQALTAH--LPLGQEVNLPQLAR 626
Query: 772 KCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKP---------TLVRDDFSQAMHE 822
+C G+ DL L+ T AA R S S+ + L+ +DF QA+ +
Sbjct: 627 RCAGFVVGDLYALLTHTCRAACTRIRASGSAGGLSEEDEGDLCVAGFPLLAEDFGQALDQ 686
Query: 823 FLPVAMRDITKTSAEGGRS----GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLR 878
+ A G W DVGGL D++ I E I+LP + P + + R
Sbjct: 687 L------QTAHSQAVGAPRIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLSLG--LRR 738
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
S +LL+GPPG GKT + A A CSL F+SVKGPEL+N Y+G SE+ VR++F++A AAAP
Sbjct: 739 SGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAP 798
Query: 939 CLLFFDEFDSIAPKRGH--DNTGVTDRVVNQ-------VSSTSYLFII 977
C++FFDE DS+AP RG D+ GV DRVV+Q + ST +F+I
Sbjct: 799 CIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVI 846
Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
S VLL GPPG GKT V AA + L + V L A E ++ FS+A P
Sbjct: 465 SCVLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRAVETKLQATFSRARRCRP 524
Query: 939 CLLFFDEFDSIAPKRGHDNTGVTDRV 964
+L D + R D G RV
Sbjct: 525 AVLLLTAVDLLG--RDRDGLGEDARV 548
>sp|Q54SY2|NVL_DICDI Putative ribosome biogenesis ATPase nvl OS=Dictyostelium discoideum
GN=nvl PE=3 SV=1
Length = 867
Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 143/515 (27%), Positives = 219/515 (42%), Gaps = 127/515 (24%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P IL+HGP G GKT LAKA+A L+ L A S +S E +R SN I+
Sbjct: 250 PRGILLHGPSGCGKTLLAKAIAGELKVP--LFAISATEITSGVSGESEARVRTLFSNAIA 307
Query: 650 EALDHAPSIVIFDNLDSII----SSSSDPE----------------------GSQPSTSV 683
+A P I+ D +D+I S+S D E ++P+
Sbjct: 308 QA----PCIIFIDEIDAIAPKRESASKDMERRIVSQLLTCMDSLNYLSSNNSTNEPNEQT 363
Query: 684 IALTKFLVDIMDEYGEKRKSSCGI-------------GPIAFVASAQSLEKIPQSLTSSG 730
+ DI++ + ++ G + + + E + +L G
Sbjct: 364 EQQQQQQQDIIEVDSQATTTTTASNNNNKQQKNDFKKGHVIVIGATNRPESLDTALRIGG 423
Query: 731 RFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVH 790
RFD + L P + R IL+ + LE + + ++A+ GY D+ +LV
Sbjct: 424 RFDKEICLGIPDQTARCKILKVITSKMRLENNFD-YEEIATLTPGYVGADINLLVKEAAT 482
Query: 791 AAVGRYLHSDSS---------------------------FEKHIKPTLVRD------DFS 817
+V R S+ + ++ ++P + DF
Sbjct: 483 NSVNRIFTSNLNGASSSSSSSSSSTTNINNIGLSTELLISKEPLEPEKLNSLYIEMIDFK 542
Query: 818 QAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRL 877
+A+ + +P A R+ T WDDVG L+ ++ + I P ++P + +
Sbjct: 543 KALKKVVPAAKREGFATIP---NVTWDDVGALSGVREELTNSILRPIRYPKKYKNMGIDS 599
Query: 878 RSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAA 937
+ VL+YGPPGCGKT + A A+ C FISVKGPELLNKY+G SE+AVR +F +A A++
Sbjct: 600 PAGVLMYGPPGCGKTLLAKAIASECQANFISVKGPELLNKYVGESERAVRQVFQRAAASS 659
Query: 938 PCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQVSSTSYLFIIYFWEVGKKEGVVPYDIY 994
PC++FFDEFD++APKR T+RVVN
Sbjct: 660 PCVIFFDEFDALAPKRGGGDGGGNQATERVVN---------------------------- 691
Query: 995 ILVNFLISACPCFQQFLTELDGVEVLTGVFVFAAT 1029
Q LTE+DG+E + VF+ AAT
Sbjct: 692 --------------QLLTEMDGLEKRSEVFIIAAT 712
Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 74/136 (54%), Gaps = 4/136 (2%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+ ++GG+ I+E IE P P I++ + +LL+GP GCGKT + A A
Sbjct: 215 FSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKAIAGEL 274
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ ++ E+ + G SE VR +FS A A APC++F DE D+IAPKR + +
Sbjct: 275 KVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKRESASKDMER 334
Query: 963 RVVNQ----VSSTSYL 974
R+V+Q + S +YL
Sbjct: 335 RIVSQLLTCMDSLNYL 350
Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 110/251 (43%), Gaps = 39/251 (15%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------R 641
P +L++GPPG GKT LAKA+A + A+ + V KGP +
Sbjct: 600 PAGVLMYGPPGCGKTLLAKAIASECQ------ANFISV--------KGPELLNKYVGESE 645
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A+ A +P ++ FD D++ +G + + + L + MD G ++
Sbjct: 646 RAVRQVFQRAAASSPCVIFFDEFDALAPKRGGGDGGGNQATERVVNQLLTE-MD--GLEK 702
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+S + +A+ + I ++ GR D V +P P+ ER IL+ + +
Sbjct: 703 RSE-----VFIIAATNRPDIIDAAMCRPGRLDKMVYVPLPSPEERCEILKTLTHKIPIH- 756
Query: 762 SDEILLDVAS--KCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKP-TLVRDDFSQ 818
D L+ V + +C + DL +LV + A+ R ++S+ +P T+ +DF
Sbjct: 757 QDVDLIKVGTDLRCHSFSGADLSLLVKEAANHAISRGFDNNST-----EPDTVTMEDFIF 811
Query: 819 AMHEFLPVAMR 829
A+ + P R
Sbjct: 812 ALSKIKPSVSR 822
>sp|P54811|TERA1_CAEEL Transitional endoplasmic reticulum ATPase homolog 1
OS=Caenorhabditis elegans GN=cdc-48.1 PE=1 SV=1
Length = 809
Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/398 (31%), Positives = 196/398 (49%), Gaps = 33/398 (8%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL+ GPPG+GKT +A+AVA L+ + S++S E +R
Sbjct: 236 FKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVM--SKMSGESESNLR 293
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A E + P+I+ D +D+I G V L + +MD G K
Sbjct: 294 KAFE----ECEKNQPAILFIDEIDAIAPKREKTNGEVERRIVSQL----LTLMD--GVKG 343
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+S+ + +A+ I +L GRFD + + P A R IL I ++++
Sbjct: 344 RSN-----LVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILR--IHTKNMKL 396
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ +A++C G+ DL L + + D + + +L +
Sbjct: 397 ADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDDQIDAEVLNSLAVTME 456
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F A + P A+R+ E + W D+GGL +++ ++E+++ P + P + +
Sbjct: 457 NFRFAQGKSSPSALREAV---VETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFG 513
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
++ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VRD+F KA
Sbjct: 514 MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKAR 573
Query: 935 AAAPCLLFFDEFDSI----APKRGHDNTGVTDRVVNQV 968
AAAPC+LFFDE DSI G D G +DRV+NQV
Sbjct: 574 AAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQV 611
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 73/127 (57%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG+ IKEM+ELP + P +F ++ +LL+GPPG GKT I A A
Sbjct: 208 GYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANE 267
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F + P +LF DE D+IAPKR N V
Sbjct: 268 TGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKTNGEVE 327
Query: 962 DRVVNQV 968
R+V+Q+
Sbjct: 328 RRIVSQL 334
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 85/222 (38%), Gaps = 30/222 (13%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQAL 644
+L +GPPG GKT LAKA+A C + KGP + +
Sbjct: 520 VLFYGPPGCGKTLLAKAIANE--------------CQANFISIKGPELLTMWFGESEANV 565
Query: 645 SNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSS 704
+ +A AP ++ FD LDSI + G + + ++ MD K+
Sbjct: 566 RDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKN-- 623
Query: 705 CGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDE 764
+ + + + I ++ GR D + +P P + R IL+ +++ L D
Sbjct: 624 -----VFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPL-SKDL 677
Query: 765 ILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKH 806
L +A G+ DL + R A+ + + EK
Sbjct: 678 DLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEKE 719
>sp|Q9P3A7|CDC48_SCHPO Cell division cycle protein 48 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cdc48 PE=1 SV=2
Length = 815
Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 132/412 (32%), Positives = 204/412 (49%), Gaps = 38/412 (9%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + + P IL++GPPG+GKT +A+AVA L+ + S+++ E +R
Sbjct: 250 FKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIM--SKMAGESESNLR 307
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA ++P+I+ D +DSI G V L + +MD G K
Sbjct: 308 KAFE----EAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQL----LTLMD--GMKA 357
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+S+ + +A+ I +L GRFD V + P + R IL I ++++
Sbjct: 358 RSN-----VVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILR--IHTKNMKL 410
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVR------D 814
+D++ L+ +A++ GY DL L + + E I ++ D
Sbjct: 411 ADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEIDAEVLDSLGVTMD 470
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F A+ P A+R+ T E W+D+GGL +++ ++E +++P + F +
Sbjct: 471 NFRFALGSSNPSALRE---TVVEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFG 527
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL +GPPG GKT + A A CS FISVKGPELL+ + G SE VRDIF KA
Sbjct: 528 VTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKAR 587
Query: 935 AAAPCLLFFDEFDSIAPKR--GHDNTGVTDRVVNQ-------VSSTSYLFII 977
AAAPC++F DE DSIA R ++G DRVVNQ V+S +F+I
Sbjct: 588 AAAPCVVFLDELDSIAKARGASAGDSGGGDRVVNQLLTEMDGVNSKKNVFVI 639
Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 74/127 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG I+E++ELP + P +F ++ +L+YGPPG GKT + A A
Sbjct: 222 GYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANE 281
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A +P ++F DE DSIAPKR N V
Sbjct: 282 TGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVE 341
Query: 962 DRVVNQV 968
RVV+Q+
Sbjct: 342 RRVVSQL 348
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 86/216 (39%), Gaps = 32/216 (14%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQAL 644
+L GPPG+GKT LAKA+A C + KGP + +
Sbjct: 534 VLFFGPPGTGKTLLAKAIANE--------------CSANFISVKGPELLSMWFGESESNV 579
Query: 645 SNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSS 704
+ +A AP +V D LDSI + + S + L+ MD K+
Sbjct: 580 RDIFDKARAAAPCVVFLDELDSIAKARG--ASAGDSGGGDRVVNQLLTEMDGVNSKKN-- 635
Query: 705 CGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDE 764
+ + + ++I +L GR D + +P P R +IL+ ++ R + D
Sbjct: 636 -----VFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQL-RHTPVAEDV 689
Query: 765 ILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSD 800
L VA G+ DLE +V R V A+ + D
Sbjct: 690 DLRAVAKATHGFSGADLEFVVQRAVKLAIKDSIEED 725
>sp|Q6FW67|PEX6_CANGA Peroxisomal biogenesis factor 6 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=PEX6 PE=3 SV=1
Length = 1017
Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/397 (30%), Positives = 199/397 (50%), Gaps = 53/397 (13%)
Query: 599 PGSGKTSLAKAVAKSLEHH---KDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDHA 655
P GK S+ +++A L + D ++ + S ++ ++ L N +
Sbjct: 473 PKVGKASILRSIAIDLSYQFVDIDTLSVVFSSGSSDIATTFLGYLKGKLENLLPFT---G 529
Query: 656 PSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGP-IAFVA 714
+I++ ++D I+ + Q S V AL L+ + Y I P + F
Sbjct: 530 NTIILIKHIDHILKKVDQNQDIQQSRQVKALEGDLISFIKSYSR-------IYPGVVFAF 582
Query: 715 SAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEI-----------QRRSLECSD 763
++ S++ +P+ S +FD+ V P +R++I++ + ++ ++CS+
Sbjct: 583 TSASIDNLPEGFRSEIKFDYVVH--PPNEKQRRSIIDELLSTSDLFQKYGNRKLRIQCSN 640
Query: 764 EILLDVAS-KCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTL---------VR 813
EI + S G YD++ ++ V ++ + + + IK + VR
Sbjct: 641 EIEISTLSLHSAGLSPYDIQYIISLAVADSLRKCNNYLLWRQNKIKVDMISIQNALEKVR 700
Query: 814 DDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQA 873
D+S ++ ++ ++T WDDVGGL+ +++AI E I+LP K P +F
Sbjct: 701 SDYSASIGA---PSIPNVT----------WDDVGGLSSVKDAIMETIDLPLKHPELFGSG 747
Query: 874 PLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKA 933
L+ RS +L YGPPG GKT + A A SL F SVKGPELLN YIG SE VR +F KA
Sbjct: 748 -LKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKA 806
Query: 934 TAAAPCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQV 968
A PC++FFDE DS+APKRG+ D+ GV DR+V+Q+
Sbjct: 807 RDAKPCVIFFDEVDSVAPKRGNQGDSGGVMDRIVSQL 843
>sp|Q9SS94|CD48C_ARATH Cell division control protein 48 homolog C OS=Arabidopsis thaliana
GN=CDC48C PE=2 SV=2
Length = 820
Score = 167 bits (424), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 132/414 (31%), Positives = 189/414 (45%), Gaps = 34/414 (8%)
Query: 573 LLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRL 632
+L+P+ F + P IL HGPPG GKT LA A+A A + F S
Sbjct: 253 ILNPEP---FKKIGVKPPSGILFHGPPGCGKTKLANAIANE--------AGVPFYKISAT 301
Query: 633 SLEKG--PIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFL 690
+ G + + S+A APSIV D +D+I S E Q +T+ L
Sbjct: 302 EVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAI---GSKRENQQREMEKRIVTQLL 358
Query: 691 --VDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKA 748
+D G+K G + + + + + +L SGRF+ + L AP R
Sbjct: 359 TCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDEDARAE 418
Query: 749 ILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYL---HSDSSFEK 805
IL Q+ LE + +A G+ DLE + A+ R L S+ S +
Sbjct: 419 ILSVVAQKLRLEGPFDKKR-IARLTPGFVGADLESVAYLAGRKAIKRILDSRKSEQSGDG 477
Query: 806 HIKPTLVRDDFSQAMHEFLPVAMRD----ITKTSAEGGRSG--------WDDVGGLTDIQ 853
+ +R + + E L V M D + A R G WDDVGGL ++
Sbjct: 478 EDDKSWLRMPWPEEELEKLFVKMSDFEEAVNLVQASLTREGFSIVPDVKWDDVGGLDHLR 537
Query: 854 NAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPE 913
I P K P+I+ + L + LLYGPPGCGKT I AAA F+ +KG E
Sbjct: 538 LQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAE 597
Query: 914 LLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQ 967
LLNKY+G SE A+R +F +A APC++FFDE D++ RG + V +R++NQ
Sbjct: 598 LLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGKEGAWVVERLLNQ 651
Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 70/126 (55%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+ D GG+ I + ++ + P P F + ++ S +L +GPPGCGKT + A A
Sbjct: 232 FKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEA 291
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ F + E+++ GASE+ +R++FSKA AP ++F DE D+I KR + +
Sbjct: 292 GVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQQREMEK 351
Query: 963 RVVNQV 968
R+V Q+
Sbjct: 352 RIVTQL 357
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 119/273 (43%), Gaps = 36/273 (13%)
Query: 545 STQGFDSNVSSLSWMGTTASDVI----NR--IKVLLSPDSGLWFSTYHLPLPGHILIHGP 598
+ +GF S V + W D + NR ++ + PD + + + L L++GP
Sbjct: 515 TREGF-SIVPDVKWDDVGGLDHLRLQFNRYIVRPIKKPD---IYKAFGVDLETGFLLYGP 570
Query: 599 PGSGKTSLAKAVAK----SLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDH 654
PG GKT +AKA A + H K +V S L A+ A
Sbjct: 571 PGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGESEL----------AIRTLFQRARTC 620
Query: 655 APSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVA 714
AP ++ FD +D++ +S EG+ + L +FLV++ + GE+R + +
Sbjct: 621 APCVIFFDEVDALTTSRGK-EGAWVVERL--LNQFLVEL--DGGERRN-------VYVIG 668
Query: 715 SAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASKCD 774
+ + + + GRF + +P P A ER +IL+ +++ ++ S ++ + C+
Sbjct: 669 ATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIARKKPIDPSVDLDGIAKNNCE 728
Query: 775 GYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHI 807
G+ DL LV + AV + S S E +
Sbjct: 729 GFSGADLAHLVQKATFQAVEEMIGSSESSEDDV 761
>sp|P54609|CD48A_ARATH Cell division control protein 48 homolog A OS=Arabidopsis thaliana
GN=CDC48A PE=1 SV=1
Length = 809
Score = 167 bits (423), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 183/385 (47%), Gaps = 41/385 (10%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC------SRLSLE 635
F + + P IL++GPPGSGKT +A+AVA F C S+L+ E
Sbjct: 233 FKSIGVKPPKGILLYGPPGSGKTLIARAVANE--------TGAFFFCINGPEIMSKLAGE 284
Query: 636 KGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMD 695
+R+A EA +APSI+ D +DSI G + L+ +MD
Sbjct: 285 SESNLRKAFE----EAEKNAPSIIFIDEIDSIAPKREKTNGEVERR----IVSQLLTLMD 336
Query: 696 EYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQ 755
G K ++ + + + I +L GRFD + + P R +L I
Sbjct: 337 --GLKSRAH-----VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR--IH 387
Query: 756 RRSLECSDEILLDVASK-CDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPT 810
++++ ++++ L+ SK GY DL L + + D S + I +
Sbjct: 388 TKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNS 447
Query: 811 L--VRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 868
+ + F A+ P A+R+ T E W+D+GGL +++ ++E ++ P + P
Sbjct: 448 MAVTNEHFHTALGNSNPSALRE---TVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPE 504
Query: 869 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 928
F + + VL YGPPGCGKT + A A C FISVKGPELL + G SE VR+
Sbjct: 505 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRE 564
Query: 929 IFSKATAAAPCLLFFDEFDSIAPKR 953
IF KA +APC+LFFDE DSIA +R
Sbjct: 565 IFDKARQSAPCVLFFDELDSIATQR 589
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 75/127 (59%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DDVGG+ I+E++ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 205 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 264
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR N V
Sbjct: 265 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVE 324
Query: 962 DRVVNQV 968
R+V+Q+
Sbjct: 325 RRIVSQL 331
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 91/249 (36%), Gaps = 36/249 (14%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + + +L +GPPG GKT LAKA+A C + KGP +
Sbjct: 506 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE--------------CQANFISVKGPELL 551
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
+ +A AP ++ FD LDSI + G + + L+
Sbjct: 552 TMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTE 611
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
MD K+ + + + + I +L GR D + +P P R I +
Sbjct: 612 MDGMNAKKT-------VFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAA 664
Query: 754 IQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVR 813
+ R+S D + +A G+ D+ + R A+ + D EK R
Sbjct: 665 L-RKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKEKR------R 717
Query: 814 DDFSQAMHE 822
+ +AM E
Sbjct: 718 SENPEAMEE 726
>sp|Q9HG03|PEX6_PENCH Peroxisomal biogenesis factor 6 OS=Penicillium chrysogenum GN=pex6
PE=3 SV=1
Length = 1459
Score = 166 bits (421), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 153/279 (54%), Gaps = 32/279 (11%)
Query: 713 VASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDVAS 771
+A+ +E IP+ + S +F ++ AP ER+ IL++ + R + S ++ L +A
Sbjct: 886 IATTTDVETIPEGIRSLITHEF--EMGAPEEKEREGILQNAVTERGIRLSADVDLGSIAL 943
Query: 772 KCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPT--LVRDDFSQAMHEFLPVAMR 829
K A DL +V+R A R L S + K I + VRD R
Sbjct: 944 KTAALVAGDLVDVVERAAGARTAR-LESLAEASKKISGSEVFVRDVLLAGGD-----GAR 997
Query: 830 DITKT----SAEGGRS--------------GWDDVGGLTDIQNAIKEMIELPSKFPNIFA 871
+TK + E R GWDDVGGLT++++A+ E I+LP + P +FA
Sbjct: 998 GVTKADFDAAVEAARKNFADSIGAPKIPNVGWDDVGGLTNVKDALVETIQLPLERPELFA 1057
Query: 872 QAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFS 931
+ ++ RS +L YGPPG GKT + A A SL F SVKGPELLN YIG SE VR +F
Sbjct: 1058 KG-MKKRSGILFYGPPGTGKTLLAKAIATEFSLNFFSVKGPELLNMYIGESEANVRRVFQ 1116
Query: 932 KATAAAPCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQV 968
+A A PC++FFDE DS+APKRG+ D+ GV DR+V+Q+
Sbjct: 1117 RARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQL 1155
Score = 41.2 bits (95), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 34/215 (15%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE-- 650
IL +GPPG+GKT LAKA+A + F KGP + L+ +I E
Sbjct: 1066 ILFYGPPGTGKTLLAKAIATEFS--------LNFFSV------KGP---ELLNMYIGESE 1108
Query: 651 ---------ALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
A D P +V FD LDS+ + +G +++ L ++ G +
Sbjct: 1109 ANVRRVFQRARDARPCVVFFDELDSVAPKRGN-QGDSGGVMDRIVSQLLAELDGMNGGEE 1167
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
S G + + + + + +L GRFD + L ++A + + R+
Sbjct: 1168 NS----GGVFVIGATNRPDLLDTALLRPGRFDKMLYLGVSDTHRKQATILEALTRKFALH 1223
Query: 762 SDEILLDVASKCD-GYDAYDLEILVDRTVHAAVGR 795
D L VA + Y DL L + A+ R
Sbjct: 1224 PDVSLDRVAEQLPLTYTGADLYALCSDAMLKAITR 1258
>sp|Q9C1E9|PEX6_COLOR Peroxisomal biogenesis factor 6 OS=Colletotrichum orbiculare (strain
104-T / ATCC 96160 / CBS 514.97 / LARS 414 / MAFF 240422)
GN=PEX6 PE=3 SV=1
Length = 1388
Score = 166 bits (421), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 105/273 (38%), Positives = 152/273 (55%), Gaps = 22/273 (8%)
Query: 712 FVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD-VA 770
VA+ ++K+P + G F +++ AP +ER+ IL ++ R + E+ L+ +A
Sbjct: 853 LVATTSDVDKVPDGV--RGLFSHELEVGAPDEAEREGILRTIVEDRGINLDPEVDLNGIA 910
Query: 771 SKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRD--DFSQAMHEFLPVAM 828
K A DL +VDR A V + L + K + VRD AM +
Sbjct: 911 LKTAALVAGDLVDVVDR---ALVAQRLRLEQISSKTGQAVTVRDLQVAGGAMARCVTKGD 967
Query: 829 RDITKTSAEGGRSG-----------WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRL 877
D+ +A +G WDDVGGL ++++A+ E I+LP + P +FA+ ++
Sbjct: 968 FDVAVEAARKNFAGAIGAPKIPNVTWDDVGGLNNVKDAVTETIQLPLERPELFAKG-MKK 1026
Query: 878 RSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAA 937
RS +L YGPPG GKT + A A SL F SVKGPELLN YIG SE VR +F +A A
Sbjct: 1027 RSGILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAR 1086
Query: 938 PCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQV 968
PC++FFDE DS+APKRG+ D+ GV DR+V+Q+
Sbjct: 1087 PCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQL 1119
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 60/152 (39%), Gaps = 33/152 (21%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE-- 650
IL +GPPG+GKT LAKA+A + F KGP + L+ +I E
Sbjct: 1030 ILFYGPPGTGKTLLAKAIATEYS--------LNFFSV------KGP---ELLNMYIGESE 1072
Query: 651 ---------ALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
A D P +V FD LDS+ P+ S + + + ++ E
Sbjct: 1073 ANVRRVFQRARDARPCVVFFDELDSVA-----PKRGNQGDSGGVMDRIVSQLLAELDGMS 1127
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFD 733
G + + + + + +L GRFD
Sbjct: 1128 GGDDTSGGVFVIGATNRPDLLDPALLRPGRFD 1159
>sp|Q6CPV1|PEX6_KLULA Peroxisomal biogenesis factor 6 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=PEX6 PE=3 SV=1
Length = 1000
Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 205/443 (46%), Gaps = 60/443 (13%)
Query: 552 NVSSLSWMGTTASDVINRIKVLLSPDSGLWFSTYHLPLPGHILIHGP-PGSGKTSLAKAV 610
N+S L A R+K +L ++ + S ++ + I++H P GKT L ++V
Sbjct: 419 NLSPLFHYDEDAFPFAKRLKDIL--NTAIKCSARNVNVGTSIMLHSSSPNVGKTMLTRSV 476
Query: 611 AKSLEHHKDLVAHIVFVCCSRLSLEKGP---------IIRQALSNFISEALDHAPSIVIF 661
L H ++ V C L+ IR + IS + +VIF
Sbjct: 477 CAELGFH------LIHVDCLSLTSNSNTSDATNKTIGYIRAKIETIIS----YVEKVVIF 526
Query: 662 -DNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLE 720
+L++I+ + + + S + + D+++EY K K + FV S ++
Sbjct: 527 LSHLETILEDEQNQQDNTSSKMARQMNVEMADLIEEYTTKYKGT------VFVGSTNDID 580
Query: 721 KIPQSLTSSGRFDFHVQLPAPAASERKAILE----------HEIQRRSLECSDEILLDVA 770
IP + S R F + +P P +R + + RSL + L V+
Sbjct: 581 NIPAIVRS--RIKFEIDVPVPTEKQRLQMFRWYFDPYVLNSQTPKLRSLISHNVPLQTVS 638
Query: 771 SKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLV---RDDFSQAMHEFLPVA 827
+ G D+ +V + R +D + ++ RD FS ++
Sbjct: 639 VQSAGLTPMDIRSIVKAVKYKCYQRLKQNDLLIDMTDITAVINIARDRFSDSI------- 691
Query: 828 MRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPP 887
+ + WDD+GG+ ++ I + I++P K P +F+ ++ RS +L YGPP
Sbjct: 692 ------GAPKIPNVTWDDIGGMDVVKGEIMDTIDMPLKHPELFSSG-MKKRSGILFYGPP 744
Query: 888 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFD 947
G GKT + A A+ SL F SVKGPELLN YIG SE VR +F KA A PC++FFDE D
Sbjct: 745 GTGKTLLAKAIASNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELD 804
Query: 948 SIAPKRGH--DNTGVTDRVVNQV 968
S+APKRG+ D+ GV DR+V+Q+
Sbjct: 805 SVAPKRGNQGDSGGVMDRIVSQL 827
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 98/228 (42%), Gaps = 40/228 (17%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE-- 650
IL +GPPG+GKT LAKA+A + + F KGP + L+ +I E
Sbjct: 738 ILFYGPPGTGKTLLAKAIASNFS--------LNFFSV------KGP---ELLNMYIGESE 780
Query: 651 ---------ALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
A D P ++ FD LDS+ P+ S + + + ++ E
Sbjct: 781 ANVRRVFQKARDAKPCVIFFDELDSVA-----PKRGNQGDSGGVMDRIVSQLLAELDGM- 834
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRR-SLE 760
SS G G + + + + + ++L GRFD + L +++A + + R+ +LE
Sbjct: 835 -SSGGDG-VFVIGATNRPDLLDEALLRPGRFDKMLYLGISDTDKKQANIIKALTRKFTLE 892
Query: 761 CSDEILLDVASKCD-GYDAYDLEILVDRTVHAAVGRYL-HSDSSFEKH 806
+I LD+A KC Y D L + A+ R D +EK+
Sbjct: 893 SGIDI-LDIAKKCPFNYTGADFYALCSDALLNAMTRVAGEVDEKWEKY 939
>sp|P54777|PEX6_RAT Peroxisome assembly factor 2 OS=Rattus norvegicus GN=Pex6 PE=1 SV=1
Length = 978
Score = 164 bits (416), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 130/406 (32%), Positives = 200/406 (49%), Gaps = 49/406 (12%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEAL 652
+L+ GPPGSGKT+ A L H++ V CS L + + L S A
Sbjct: 466 VLLQGPPGSGKTTAVTAACSRLG------LHLLKVPCSSLCADSSRTVETKLQTTFSRAR 519
Query: 653 DHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAF 712
P + L ++ D +G V+A + L ++DE R P+
Sbjct: 520 RCRP---VVLLLTALDLLGRDRDGLGEDARVVATLRHL--LLDEDPLSR-----CPPLMV 569
Query: 713 VASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDVAS 771
VA+ ++ +P + ++ F +++P + S+R ++L+ L E+ L +A
Sbjct: 570 VATTSRVQDLPTDVRTA--FPHELEVPVLSESQRLSVLQALTAH--LPLGQEVNLSQLAR 625
Query: 772 KCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKP-------TLVRDDFSQAMHEFL 824
+C G+ DL L+ AA R + + + + L+ +DF QA+ +
Sbjct: 626 RCAGFVVGDLYALLTHASRAACTRIKAAGLAMSEEDEGELCAAGFPLLAEDFGQALDQL- 684
Query: 825 PVAMRDITKTSAEGGRS----GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSN 880
+ A G W DVGGL D++ I E I+LP + P + + RS
Sbjct: 685 -----QTAHSQAVGAPKIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLSLG--LRRSG 737
Query: 881 VLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCL 940
+LL+GPPG GKT + A A CSL F+SVKGPEL+N Y+G SE+ VR++F++A AAAPC+
Sbjct: 738 LLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCI 797
Query: 941 LFFDEFDSIAPKRGH--DNTGVTDRVVNQ-------VSSTSYLFII 977
+FFDE DS+AP RG D+ GV DRVV+Q + ST +F+I
Sbjct: 798 IFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVI 843
Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
S VLL GPPG GKT V AA + L + V L E ++ FS+A P
Sbjct: 464 SCVLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRP 523
Query: 939 CLLFFDEFDSIAPKRGHDNTGVTDRVV 965
+L D + R D G RVV
Sbjct: 524 VVLLLTALDLLG--RDRDGLGEDARVV 548
>sp|Q9ZPR1|CD48B_ARATH Cell division control protein 48 homolog B OS=Arabidopsis thaliana
GN=CDC48B PE=2 SV=1
Length = 603
Score = 164 bits (414), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 133/447 (29%), Positives = 205/447 (45%), Gaps = 64/447 (14%)
Query: 584 TYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVA-HIVFVCCSRLSLEKGPIIRQ 642
T L P +L++GPPG+GKTSL +AV + + H +++ H V + E ++R+
Sbjct: 50 TLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAG---ESEKVLRE 106
Query: 643 ALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRK 702
A + S A+ PS++ D +D ++ D Q + + L +MD K
Sbjct: 107 AFAEASSHAVSDKPSVIFIDEID-VLCPRRDARREQD----VRIASQLFTLMD----SNK 157
Query: 703 SSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECS 762
S + VAS ++ I +L +GRFD V++ P +R IL+ ++ +L+ S
Sbjct: 158 PSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNLDPS 217
Query: 763 DEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHE 822
+ L +A C+GY DLE L +A R SDS L DF A
Sbjct: 218 VD-LQAIAISCNGYVGADLEALCREATISASKR--SSDSLI-------LTSQDFKIAKSV 267
Query: 823 FLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVL 882
P R IT E + WDDVGGL D++ +++ +E P K F + + +L
Sbjct: 268 VGPSINRGIT---VEIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGIL 324
Query: 883 LYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLF 942
L+GPPGC KT + AAA A F S+ EL + Y+G E +R+ F +A A+P ++F
Sbjct: 325 LHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIF 384
Query: 943 FDEFDSIAPKRGHDNTGVTDRVVNQVSSTSYLFIIYFWEVGKKEGVVPYDIYILVNFLIS 1002
FDE D +A KRG +++ + V ++ ST
Sbjct: 385 FDEADVVACKRGDESSSNSSTVGERLLST------------------------------- 413
Query: 1003 ACPCFQQFLTELDGVEVLTGVFVFAAT 1029
LTE+DG+E G+ V AAT
Sbjct: 414 -------LLTEMDGLEEAKGILVLAAT 433
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 838 GGRSGWD---DVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHI 894
G W ++GG A++E+I P ++P L+ +LLYGPPG GKT +
Sbjct: 13 AGNEKWRAEAEIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSL 72
Query: 895 VGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAA----PCLLFFDEFDSIA 950
V A C I + + + G SE+ +R+ F++A++ A P ++F DE D +
Sbjct: 73 VRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLC 132
Query: 951 PKR 953
P+R
Sbjct: 133 PRR 135
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 17/222 (7%)
Query: 588 PLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNF 647
P+ G IL+HGPPG KT+LAKA A + + + C S+ G L N
Sbjct: 319 PMRG-ILLHGPPGCSKTTLAKAAANAAQ-----ASFFSLSCAELFSMYVGEG-EALLRNT 371
Query: 648 ISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGI 707
A +PSI+ FD D + D S ST L L+ MD E +
Sbjct: 372 FQRARLASPSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKG----- 426
Query: 708 GPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-L 766
I +A+ I +L GRFD + +P P R IL ++ R++ D++ L
Sbjct: 427 --ILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEIL--QVHTRNMTLGDDVDL 482
Query: 767 LDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIK 808
+A + D + +LE L + ++ + + + F +H +
Sbjct: 483 RKIAEETDLFTGAELEGLCRESGTVSLRENIAATAVFNRHFQ 524
>sp|Q9DBY8|NVL_MOUSE Nuclear valosin-containing protein-like OS=Mus musculus GN=Nvl PE=1
SV=1
Length = 855
Score = 164 bits (414), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 142/484 (29%), Positives = 202/484 (41%), Gaps = 101/484 (20%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P +L+HGPPG GKT LA A+A L+ VA V S +S E Q L
Sbjct: 297 PRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIV--SGVSGES----EQKLRELFD 350
Query: 650 EALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGP 709
+A+ +AP IV D +D+I V L + D+ + R
Sbjct: 351 QAVSNAPCIVFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATAR-------- 402
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDV 769
+ + + + + +L +GRFD V L P + R+ IL+ ++ L + +
Sbjct: 403 VLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQTLCRKLRLPETFN-FCHL 461
Query: 770 ASKCDGYDAYDLEILVDRTVHAAVGRYLH----------------SDSSFEKHI--KPT- 810
A G+ DL L AV R L S+ E+ + +PT
Sbjct: 462 AHLTPGFVGADLMALCREAAMCAVNRVLMKQQAQQKKKPEIEGLPSEGDQEERLGAEPTS 521
Query: 811 -----------LVRDD--FSQAMHEFLPVAMRDITKTSAE----GGRSG--------WDD 845
L+RD S+ + L + + D AE R G W D
Sbjct: 522 ETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALAEVQPSAKREGFVTVPNVTWAD 581
Query: 846 VGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR 905
+G L DI++ + I P + P+ F L + +LL GPPGCGKT + A A L
Sbjct: 582 IGALEDIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLN 641
Query: 906 FISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVV 965
FISVKGPELLN Y+G SE+AVR +F +A +APC++FFDE D++ P+R TG + RVV
Sbjct: 642 FISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRVV 701
Query: 966 NQVSSTSYLFIIYFWEVGKKEGVVPYDIYILVNFLISACPCFQQFLTELDGVEVLTGVFV 1025
N Q LTE+DG+E VF+
Sbjct: 702 N------------------------------------------QLLTEMDGLETRQQVFI 719
Query: 1026 FAAT 1029
AAT
Sbjct: 720 LAAT 723
Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 80/146 (54%), Gaps = 13/146 (8%)
Query: 843 WDDVGGL-TDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
++DVGG ++ K +I + + P ++ + VLL+GPPGCGKT + A A
Sbjct: 263 FEDVGGNDATLKEVCKMLIHM--RHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGE 320
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
L + V PE+++ G SEQ +R++F +A + APC++F DE D+I PKR + +
Sbjct: 321 LDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAITPKREVASKDME 380
Query: 962 DRVV----------NQVSSTSYLFII 977
R+V N V++T+ + +I
Sbjct: 381 RRIVAQLLTCMDDLNNVAATARVLVI 406
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 137/324 (42%), Gaps = 65/324 (20%)
Query: 535 VSFYTVKERGSTQGFDSNVSSLSWMGTTASDVINR--IKVLLSP-DSGLWFSTYHLPLPG 591
V+ V+ +GF V +++W A + I I +L+P + F T L P
Sbjct: 557 VALAEVQPSAKREGF-VTVPNVTWADIGALEDIRDELIMAILAPVRNPDQFRTLGLGTPA 615
Query: 592 HILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQA 643
IL+ GPPG GKT LAKAVA + + F+ KGP + +A
Sbjct: 616 GILLAGPPGCGKTLLAKAVANE--------SGLNFISV------KGPELLNMYVGESERA 661
Query: 644 LSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKS 703
+ A + AP ++ FD +D++ SD E SV + + L + MD +++
Sbjct: 662 VRQVFQRAKNSAPCVIFFDEVDALCPRRSDRET---GASVRVVNQLLTE-MDGLETRQQ- 716
Query: 704 SCGIGPIAFVASAQSLEKIPQSLTSSGRFD--FHVQLPAPAASERKAILEHEIQRRSLEC 761
+ +A+ + I ++ GR D V LP PA +R AIL+ + +
Sbjct: 717 ------VFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPA--DRVAILKTITKNGTKPP 768
Query: 762 SDEI--LLDVAS--KCDGYDAYDLEILVDRTVHAAVGRYL-----------------HSD 800
DE L +A+ +C+ Y DL LV A+ + + H +
Sbjct: 769 LDEDVNLETIANDLRCNCYTGADLTALVREASLCALRQEITAQKNGVGAGELKVSHKHFE 828
Query: 801 SSFEKHIKPTLVRDDFSQAMHEFL 824
+F+K +KP++ D Q M+E L
Sbjct: 829 DAFKK-VKPSISIKD--QVMYEAL 849
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 374,031,750
Number of Sequences: 539616
Number of extensions: 15610794
Number of successful extensions: 59179
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 849
Number of HSP's that attempted gapping in prelim test: 54601
Number of HSP's gapped (non-prelim): 4438
length of query: 1052
length of database: 191,569,459
effective HSP length: 128
effective length of query: 924
effective length of database: 122,498,611
effective search space: 113188716564
effective search space used: 113188716564
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)